Psyllid ID: psy10662

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL
Secondary Structure (PSIPRED)
ccccEEEEccccccEEEEEcccccEEcEEEccccccEEEEEEcccccEEEEcccccEEEEEcccccEEEccccccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEEEEEccccccccccccccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEEEEcccccccccccccccccccEEEEEEcccccEEEEEcccccEEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEcccccEEEEEEccccccEEEEEccccccEEEEEcccccEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEEEEccccccEEEEEccccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEEEccccccEEEEcccccccccEEEEEEEcccccEEEEcccccEEEEEEcccccc
Coil and Loop (DISEMBL)
mnschlafgsadhcvhyydLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLklwninkpnclrsfvghindknfvglatdgdyvacgsennSLYIYYKGLSKHMHAYRFDTVRSMLESSfvghindknfvglatdgdyvacgsennSLYIYYKGLSKHMHAYRFDTVRSMLerdrneddtnEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL
Flexible Loop (DISEMBL)
mnschlafgsADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIvsastdsqlklwNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLvaansqgiikiyvipirvl
Low Complexity Region (SEG)
MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL
Disordered region (IsUnstruct)
***CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML********TNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR**
Disordered Region (DISOPRED)
MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL
Disordered Region (DISEMBL)
MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL
Disordered Region (DISPRO)
**SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q8NHY2	731	E3 ubiquitin-protein liga	yes	N/A	0.696	0.210	0.539	6e-56
Q9R1A8	733	E3 ubiquitin-protein liga	yes	N/A	0.696	0.210	0.539	6e-56
Q9SYX2	1029	Protein SUPPRESSOR OF PHY	yes	N/A	0.714	0.153	0.428	2e-33
P93471	672	E3 ubiquitin-protein liga	N/A	N/A	0.515	0.169	0.526	1e-31
P43254	675	E3 ubiquitin-protein liga	no	N/A	0.515	0.168	0.526	1e-31
Q9LJR3	845	Protein SPA1-RELATED 3 OS	no	N/A	0.710	0.185	0.379	9e-31
Q94BM7	794	Protein SPA1-RELATED 4 OS	no	N/A	0.710	0.197	0.379	1e-30
Q9T014	1036	Protein SPA1-RELATED 2 OS	no	N/A	0.723	0.154	0.379	1e-30
Q9FFA7	368	WD repeat-containing prot	no	N/A	0.511	0.307	0.382	2e-18
Q9LTJ6	385	WD repeat-containing prot	no	N/A	0.619	0.355	0.344	3e-17

>sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1

 Score =  217 bits (552), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 115/213 (53%), Positives = 135/213 (63%), Gaps = 59/213 (27%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
           HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct: 570 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 629

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
           P CLRSF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L+ 
Sbjct: 630 PYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD- 688

Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
                                                            +   E D NE 
Sbjct: 689 -------------------------------------------------KDRKEDDTNE- 698

Query: 185 DTNEFVSAVCWRQL----SRVLVAANSQGIIKI 213
               FVSAVCWR L    S VL+AANSQG IK+
Sbjct: 699 ----FVSAVCWRALPDGESNVLIAANSQGTIKV 727

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1.
Homo sapiens (taxid: 9606)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2

 Score =  217 bits (552), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 115/213 (53%), Positives = 135/213 (63%), Gaps = 59/213 (27%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
           HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct: 572 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 631

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
           P CLRSF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L+ 
Sbjct: 632 PYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD- 690

Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
                                                            +   E D NE 
Sbjct: 691 -------------------------------------------------KDRKEDDTNE- 700

Query: 185 DTNEFVSAVCWRQL----SRVLVAANSQGIIKI 213
               FVSAVCWR L    S VL+AANSQG IK+
Sbjct: 701 ----FVSAVCWRALSDGESNVLIAANSQGTIKV 729

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9SYX2|SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1

 Score =  142 bits (357), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 111/210 (52%), Gaps = 52/210 (24%)

Query: 6    LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP 65
            LAFGSAD+ V+ YDLR  K       GH KAVSYVKF++ E IVSASTD+ LKLWN+NK 
Sbjct: 866  LAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNK- 924

Query: 66   NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESS 125
                         N  GL+      AC        + YKG                    
Sbjct: 925  ------------TNSSGLSPG----ACS-------LTYKG-------------------- 941

Query: 126  FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE-- 183
               H N KNFVGL+    Y+ACGSE N +Y YYK L   M +Y+F +V  +     NE  
Sbjct: 942  ---HTNQKNFVGLSVLDGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPI---SGNEYF 995

Query: 184  DDTNEFVSAVCWRQLSRVLVAANSQGIIKI 213
            DD  +FVS+VCWR+ S +LVAANS G +K+
Sbjct: 996  DDNGQFVSSVCWRKKSNMLVAANSTGNMKL 1025

Controls normal photoperiodic flowering and regulates circadian rhythms. Required for suppression of photomorphogenesis in dark-grown seedlings and for normal elongation growth of adult plants. Integral component of the COP1/SPA E3 ubiquitin-protein ligase complex. Involved in HY5, HFR1, LAF1 and CO degradation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1

 Score =  136 bits (342), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 86/114 (75%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
           ++A GSADH +HYYDLRN    + VF GH+KAVSYVKFL+ +++ SASTDS L+LW++ +
Sbjct: 517 YIAVGSADHHIHYYDLRNISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQ 576

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV 118
              +R+F GH N+KNFVGL    +Y+ACGSE N +++Y+K +SK +  +RF T+
Sbjct: 577 NLPVRTFRGHANEKNFVGLTVRSEYIACGSETNEVFVYHKEISKPLTWHRFGTL 630

E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways.

Pisum sativum (taxid: 3888)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2

 Score =  136 bits (342), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 87/114 (76%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           +S ++A GSADH +HYYDLRN  + L VF GH+KAVSYVKFL+  ++ SASTDS L+LW+
Sbjct: 517 SSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWD 576

Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF 115
           +     +R+F GH N+KNFVGL  + +Y+ACGSE N +Y+Y+K +++ + ++RF
Sbjct: 577 VKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRF 630

E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors such as HY5, HYH and LAF1. Down-regulates MYB21, probably via ubiquitination process. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways.

Arabidopsis thaliana (taxid: 3702)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9LJR3|SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1

 Score =  133 bits (335), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 79/208 (37%), Positives = 104/208 (50%), Gaps = 51/208 (24%)

Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP 65
           LAFGSADH V+YYDLRN K  L    GH K VSYVKF++   +VS+STD+ LKLW+++  
Sbjct: 684 LAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMS 743

Query: 66  NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESS 125
                                    A G   + L+                        S
Sbjct: 744 -------------------------ASGINESPLH------------------------S 754

Query: 126 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD 185
           F GH N KNFVGL+    Y+A GSE N +++Y+K     + +Y F+   SM       DD
Sbjct: 755 FTGHTNLKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSM--SGLEVDD 812

Query: 186 TNEFVSAVCWRQLSRVLVAANSQGIIKI 213
            ++F+S++CWR  S  LVAANS G IKI
Sbjct: 813 ASQFISSICWRGQSSTLVAANSNGNIKI 840

Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 51/208 (24%)

Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP 65
           LAFGSADH V+YYDLRN K  L    GH K VSYV+F++   +VS+STD+ LKLW+++  
Sbjct: 634 LAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMS 693

Query: 66  NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESS 125
                 +  IN+                                +H             S
Sbjct: 694 ------ISGINET------------------------------PLH-------------S 704

Query: 126 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD 185
           F+GH N KNFVGL+    Y+A GSE N +++Y+K     + +Y+F T+  + E +   DD
Sbjct: 705 FMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEV--DD 762

Query: 186 TNEFVSAVCWRQLSRVLVAANSQGIIKI 213
            ++F+S+VCWR  S  LVAANS G IKI
Sbjct: 763 ASQFISSVCWRGQSSTLVAANSTGNIKI 790

Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 114/208 (54%), Gaps = 48/208 (23%)

Query: 6    LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP 65
            LAFGS+D   + YDLRN +    +  GH KAVSY KFL+ E +V+ASTD+ LKLW++ K 
Sbjct: 873  LAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKK- 931

Query: 66   NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESS 125
                            GL+T+    AC     SL                         +
Sbjct: 932  ------------TTHGGLSTN----AC-----SL-------------------------T 945

Query: 126  FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD 185
            F GH N+KNFVGL+T   Y+ACGSE N +Y Y++ L   + +Y+F ++  +  ++  E+D
Sbjct: 946  FGGHTNEKNFVGLSTSDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEI-EED 1004

Query: 186  TNEFVSAVCWRQLSRVLVAANSQGIIKI 213
             N FVS+VCWR+ S ++V+A+S G IK+
Sbjct: 1005 NNLFVSSVCWRKRSNMVVSASSNGSIKV 1032

Involved in suppression of photomorphogenesis in dark-grown seedlings. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFA7|RUP2_ARATH WD repeat-containing protein RUP2 OS=Arabidopsis thaliana GN=RUP2 PE=1 SV=1

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 2/115 (1%)

Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP 65
           +A G AD   + YD+R   +     +GH K VSYV+FL+   +V+A TD  LKLW++   
Sbjct: 210 VAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDG 269

Query: 66  NCLRSFVGHINDKNFVGLAT--DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV 118
             +R++ GH+N++NFVGL+   +G    CGSENN +++Y +   K +    F+ V
Sbjct: 270 RVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEPV 324

Functions in association with RUP1 as repressor of UV-B-induced photomorphogenesis mediated by UVR8 and HY5. Play a crucial negative feedback regulatory role downstream of UVR8-COP1 to inhibit UVR8 function, balance UV-B-specific responses and ensure normal plant growth. Is involved in the regulation of photoperiodic flowering and vegetative development. May act as negative regulator of photoperiodic flowering by suppressing flowering through the action of CONSTANS (CO) and FLOWERING LOCUS T (FT).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LTJ6|RUP1_ARATH WD repeat-containing protein RUP1 OS=Arabidopsis thaliana GN=RUP1 PE=1 SV=1

 Score = 88.6 bits (218), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 11/148 (7%)

Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNI-NK 64
           +A G AD   + YD+R   + L V  GH K V+Y +F++   IV+ STD  LK W+I N 
Sbjct: 228 IAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNG 287

Query: 65  PNCLRSFVGHINDKNFVGLAT--DGDYVACGSENNSLYIYYKGLSKHM------HAYRFD 116
              +R++ GH+N +NFVGL+    G  V  GSENN +++Y K   + +      H  RF 
Sbjct: 288 RRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCGLGHTNRFG 347

Query: 117 TVRSMLESSFVGHINDK--NFVGLATDG 142
           + R  + S  +  +++     V   +DG
Sbjct: 348 SDRRFVSSVCLRQVDEDWCTLVAGGSDG 375

Functions in association with RUP2 as repressor of UV-B-induced photomorphogenesis mediated by UVR8 and HY5. Play a crucial negative feedback regulatory role downstream of UVR8-COP1 to inhibit UVR8 function, balance UV-B-specific responses and ensure normal plant growth. Is involved in the regulation of photoperiodic flowering and vegetative development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
307211652	688	E3 ubiquitin-protein ligase RFWD2 [Harpe	0.714	0.229	0.608	2e-65
340725942	676	PREDICTED: e3 ubiquitin-protein ligase R	0.714	0.233	0.589	4e-64
345496707	675	PREDICTED: E3 ubiquitin-protein ligase R	0.714	0.234	0.580	1e-62
242021289	642	RING finger and WD repeat domain protein	0.714	0.246	0.592	3e-61
91077676	662	PREDICTED: similar to E3 ubiquitin-ligas	0.710	0.237	0.575	3e-60
348531414	716	PREDICTED: E3 ubiquitin-protein ligase R	0.696	0.215	0.563	2e-58
432914419	705	PREDICTED: E3 ubiquitin-protein ligase R	0.696	0.218	0.563	2e-58
410924241	703	PREDICTED: E3 ubiquitin-protein ligase R	0.696	0.219	0.549	5e-57
427785535	626	Putative e3 ubiquitin-ligase protein [Rh	0.696	0.246	0.555	7e-57
241167385	602	ubiquitin ligase Cop1, putative [Ixodes	0.696	0.255	0.551	4e-56

>gi|307211652|gb|EFN87676.1| E3 ubiquitin-protein ligase RFWD2 [Harpegnathos saltator]

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 129/212 (60%), Positives = 146/212 (68%), Gaps = 54/212 (25%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           +SCHLAFGSADHCVHYYDLRN KEAL +FKGHRKAVSYVKF+NKE+IVSASTDSQLK+WN
Sbjct: 527 SSCHLAFGSADHCVHYYDLRNMKEALCIFKGHRKAVSYVKFINKEEIVSASTDSQLKMWN 586

Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
           IN P CLRSFVGH+N+KNFVGLATDGDYVACGSENN+LY+YYKGL+K + +Y+FD VRS+
Sbjct: 587 INNPLCLRSFVGHVNEKNFVGLATDGDYVACGSENNALYVYYKGLTKQLFSYKFDAVRSI 646

Query: 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDR 181
           LE                                                     L+  R
Sbjct: 647 LE-----------------------------------------------------LQDRR 653

Query: 182 NEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI 213
            E D NEFVSAVCWRQ+S V+VAANSQGIIKI
Sbjct: 654 EE-DLNEFVSAVCWRQMSNVVVAANSQGIIKI 684

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725942|ref|XP_003401323.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Bombus terrestris]

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 125/212 (58%), Positives = 145/212 (68%), Gaps = 54/212 (25%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           +SCHLAFGSADHCVHYYDLRN KEAL +FKGHRKAVSYVKF+NKE+IVSASTDSQLK+WN
Sbjct: 515 SSCHLAFGSADHCVHYYDLRNMKEALCIFKGHRKAVSYVKFINKEEIVSASTDSQLKMWN 574

Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
           IN P+CLRSFVGH+N+KNF+GL TDGDYVACGSENN+LY+YYKGLSK + +Y+FD VRS+
Sbjct: 575 INNPHCLRSFVGHVNEKNFIGLTTDGDYVACGSENNALYVYYKGLSKQLFSYKFDAVRSI 634

Query: 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDR 181
           LE                                                     ++  R
Sbjct: 635 LE-----------------------------------------------------IQERR 641

Query: 182 NEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI 213
            E D NEFVSAVCW+Q+S V+VAANSQG IKI
Sbjct: 642 EE-DLNEFVSAVCWKQMSNVVVAANSQGTIKI 672

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345496707|ref|XP_003427793.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Nasonia vitripennis]

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 123/212 (58%), Positives = 144/212 (67%), Gaps = 54/212 (25%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           +SCHLAFGSADHCVHYYDLRN KEAL +FKGH+KAVSYVKF+N+++IVSASTDSQLK+WN
Sbjct: 514 SSCHLAFGSADHCVHYYDLRNMKEALCIFKGHKKAVSYVKFVNEQEIVSASTDSQLKMWN 573

Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
           IN P CLRSFVGH+N+KNFVGLATDGDYVACGSENN+LY+YYKGL+K + +Y+FD  +S+
Sbjct: 574 INNPYCLRSFVGHVNEKNFVGLATDGDYVACGSENNALYVYYKGLTKQLFSYKFDAAKSI 633

Query: 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDR 181
           LE+                                                     +  R
Sbjct: 634 LET-----------------------------------------------------QEKR 640

Query: 182 NEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI 213
            E D NEFVSAVCWRQ S V+VAANSQGIIKI
Sbjct: 641 EE-DLNEFVSAVCWRQNSNVVVAANSQGIIKI 671

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242021289|ref|XP_002431077.1| RING finger and WD repeat domain protein, putative [Pediculus humanus corporis] gi|212516326|gb|EEB18339.1| RING finger and WD repeat domain protein, putative [Pediculus humanus corporis]

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 128/216 (59%), Positives = 144/216 (66%), Gaps = 58/216 (26%)

Query: 1   MNSC---HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQL 57
            N C   +LAFGSADHCVHYYDLR  KEAL+VFKGHRKAVSYVKFLNKEDIVSASTDSQL
Sbjct: 478 FNPCSSYNLAFGSADHCVHYYDLRKMKEALSVFKGHRKAVSYVKFLNKEDIVSASTDSQL 537

Query: 58  KLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDT 117
           K+WN+N+ +CLRSFVGHIN+KNFVGLATDGDYVACGSENNSLY+YYKG++K +  ++FDT
Sbjct: 538 KMWNVNQSHCLRSFVGHINEKNFVGLATDGDYVACGSENNSLYVYYKGVTKQLFNFKFDT 597

Query: 118 VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML 177
           VRS+LE                                                  +S  
Sbjct: 598 VRSVLE--------------------------------------------------KSSK 607

Query: 178 ERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI 213
           E D N     EFVSAVCWRQ S V+VAANSQGIIKI
Sbjct: 608 EDDAN-----EFVSAVCWRQQSNVVVAANSQGIIKI 638

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91077676|ref|XP_974586.1| PREDICTED: similar to E3 ubiquitin-ligase protein COP1 [Tribolium castaneum] gi|270001535|gb|EEZ97982.1| hypothetical protein TcasGA2_TC000377 [Tribolium castaneum]

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 122/212 (57%), Positives = 141/212 (66%), Gaps = 55/212 (25%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           +SCHLAFGSADHCVHYYDLRN KEA+AVFKGH+KAVSYVKFLN EDIVSASTDSQLKLWN
Sbjct: 502 SSCHLAFGSADHCVHYYDLRNMKEAVAVFKGHKKAVSYVKFLNSEDIVSASTDSQLKLWN 561

Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
           +N P CLRSFVGHIN+KNF+GLATDGDYVACGSENN++YIYYKGLSK + +Y+F+ ++ +
Sbjct: 562 VNTPYCLRSFVGHINEKNFIGLATDGDYVACGSENNAMYIYYKGLSKKLFSYKFEAIQGV 621

Query: 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDR 181
           L+                                                  +   E D 
Sbjct: 622 LD--------------------------------------------------QERREDDM 631

Query: 182 NEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI 213
           NE     FVSAVCW+Q S V+VAANSQGII I
Sbjct: 632 NE-----FVSAVCWKQNSNVVVAANSQGIINI 658

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348531414|ref|XP_003453204.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Oreochromis niloticus]

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/213 (56%), Positives = 139/213 (65%), Gaps = 59/213 (27%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
           HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF+N E+IVSASTDSQLKLWN+NK
Sbjct: 555 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNK 614

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
           P                                             H  R          
Sbjct: 615 P---------------------------------------------HCLR---------- 619

Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
           SF GHIN+KNFVGLA++GDYVACGSENNSLY+YYKGLSK +  ++FDTV+S+L++D+ ED
Sbjct: 620 SFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKED 679

Query: 185 DTNEFVSAVCWRQL----SRVLVAANSQGIIKI 213
           DTNEFVSAVCWR L    S VL+AANSQG IK+
Sbjct: 680 DTNEFVSAVCWRALPDGESNVLIAANSQGTIKV 712

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432914419|ref|XP_004079103.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Oryzias latipes]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/213 (56%), Positives = 139/213 (65%), Gaps = 59/213 (27%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
           HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF+N E+IVSASTDSQLKLWN+NK
Sbjct: 544 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNK 603

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
           P                                             H  R          
Sbjct: 604 P---------------------------------------------HCLR---------- 608

Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
           SF GHIN+KNFVGLA++GDYVACGSENNSLY+YYKGLSK +  ++FDTV+S+L++D+ ED
Sbjct: 609 SFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKED 668

Query: 185 DTNEFVSAVCWRQL----SRVLVAANSQGIIKI 213
           DTNEFVSAVCWR L    S VL+AANSQG IK+
Sbjct: 669 DTNEFVSAVCWRALPDGESNVLIAANSQGTIKV 701

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410924241|ref|XP_003975590.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Takifugu rubripes]

 Score =  226 bits (576), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 117/213 (54%), Positives = 138/213 (64%), Gaps = 59/213 (27%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
           HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct: 542 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 601

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
           P                                             H  R          
Sbjct: 602 P---------------------------------------------HCLR---------- 606

Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
           SF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L++D+ ED
Sbjct: 607 SFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKED 666

Query: 185 DTNEFVSAVCWRQL----SRVLVAANSQGIIKI 213
           DTNEFVSAVCWR L    S VL+AANSQG IK+
Sbjct: 667 DTNEFVSAVCWRALPDGESNVLIAANSQGTIKV 699

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|427785535|gb|JAA58219.1| Putative e3 ubiquitin-ligase protein [Rhipicephalus pulchellus]

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 116/209 (55%), Positives = 135/209 (64%), Gaps = 55/209 (26%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
           HLA GSADHCVHYYDLR+ K+ L VFKGH+KAVSYVKFLN  ++VSASTDSQLKLWNI+ 
Sbjct: 469 HLALGSADHCVHYYDLRSVKQPLGVFKGHKKAVSYVKFLNTTELVSASTDSQLKLWNISN 528

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
           P                                             H  R          
Sbjct: 529 P---------------------------------------------HCLR---------- 533

Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
           SF GH+N+KNFVGLATDGDYVACGSENN+LYIYYKGLSK +  +RFD VR++LE+D+ E+
Sbjct: 534 SFKGHLNEKNFVGLATDGDYVACGSENNALYIYYKGLSKQVLTFRFDVVRNILEKDKKEE 593

Query: 185 DTNEFVSAVCWRQLSRVLVAANSQGIIKI 213
           D+NEFVSAVCWR  S V+VAANSQG IK+
Sbjct: 594 DSNEFVSAVCWRMGSSVVVAANSQGTIKV 622

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241167385|ref|XP_002410055.1| ubiquitin ligase Cop1, putative [Ixodes scapularis] gi|215494716|gb|EEC04357.1| ubiquitin ligase Cop1, putative [Ixodes scapularis]

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 118/214 (55%), Positives = 137/214 (64%), Gaps = 60/214 (28%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
           HLA GSADHCVHYYDLR+TK+ L VFKGH+KAVSYVKFLN  ++VSASTDSQLKLWNIN 
Sbjct: 440 HLALGSADHCVHYYDLRSTKQPLGVFKGHKKAVSYVKFLNTTELVSASTDSQLKLWNINN 499

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
           P                                             H  R          
Sbjct: 500 P---------------------------------------------HCLR---------- 504

Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
           SF GH+N+KNFVGLATDGDYVACGSENN+LYIYYKGLSK +  +RFD VR++LE+D+ E+
Sbjct: 505 SFKGHLNEKNFVGLATDGDYVACGSENNALYIYYKGLSKQVLTFRFDVVRNILEKDKKEE 564

Query: 185 DTNEFVSAVCWRQLS-----RVLVAANSQGIIKI 213
           D+NEFVSAVCWR +S      V+VAANSQG IK+
Sbjct: 565 DSNEFVSAVCWRIVSGPLANDVVVAANSQGTIKV 598

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
UNIPROTKB|F1NQ64	717	RFWD2 "Uncharacterized protein	0.538	0.165	0.764	1.2e-49
UNIPROTKB|H0Y339	566	RFWD2 "E3 ubiquitin-protein li	0.538	0.210	0.764	2.5e-49
RGD|1304773	433	Rfwd2 "ring finger and WD repe	0.538	0.274	0.764	2.5e-49
UNIPROTKB|Q8NHY2	731	RFWD2 "E3 ubiquitin-protein li	0.538	0.162	0.764	2.6e-49
UNIPROTKB|E2RRJ5	733	RFWD2 "Uncharacterized protein	0.538	0.162	0.764	2.7e-49
MGI|MGI:1347046	733	Rfwd2 "ring finger and WD repe	0.538	0.162	0.764	2.7e-49
UNIPROTKB|F1MHX1	735	RFWD2 "Uncharacterized protein	0.538	0.161	0.764	2.9e-49
ZFIN|ZDB-GENE-070410-134	694	rfwd2 "ring finger and WD repe	0.538	0.171	0.764	1.1e-48
DICTYBASE|DDB_G0288453	970	DDB_G0288453 "E3 ubiquitin-pro	0.497	0.113	0.663	1.3e-38
TAIR|locus:2059359	675	COP1 "CONSTITUTIVE PHOTOMORPHO	0.515	0.168	0.526	1.6e-30

UNIPROTKB|F1NQ64 RFWD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 91/119 (76%), Positives = 109/119 (91%)

Query:     5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
             HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct:   556 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 615

Query:    65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123
             P+CLRSF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L+
Sbjct:   616 PHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD 674

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

UNIPROTKB|H0Y339 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 91/119 (76%), Positives = 108/119 (90%)

Query:     5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
             HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct:   405 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 464

Query:    65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123
             P CLRSF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L+
Sbjct:   465 PYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD 523

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:0005925 "focal adhesion" evidence=IDA

RGD|1304773 Rfwd2 "ring finger and WD repeat domain 2" [Rattus norvegicus (taxid:10116)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 91/119 (76%), Positives = 108/119 (90%)

Query:     5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
             HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct:   272 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 331

Query:    65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123
             P CLRSF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L+
Sbjct:   332 PYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD 390

GO:0000139 "Golgi membrane" evidence=IDA

UNIPROTKB|Q8NHY2 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)]

 Score = 514 (186.0 bits), Expect = 2.6e-49, P = 2.6e-49
 Identities = 91/119 (76%), Positives = 108/119 (90%)

Query:     5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
             HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct:   570 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 629

Query:    65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123
             P CLRSF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L+
Sbjct:   630 PYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD 688

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0000075 "cell cycle checkpoint" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006977 "DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:0005925 "focal adhesion" evidence=IDA

UNIPROTKB|E2RRJ5 RFWD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 514 (186.0 bits), Expect = 2.7e-49, P = 2.7e-49
 Identities = 91/119 (76%), Positives = 108/119 (90%)

Query:     5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
             HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct:   572 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 631

Query:    65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123
             P CLRSF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L+
Sbjct:   632 PYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD 690

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1347046 Rfwd2 "ring finger and WD repeat domain 2" [Mus musculus (taxid:10090)]

 Score = 514 (186.0 bits), Expect = 2.7e-49, P = 2.7e-49
 Identities = 91/119 (76%), Positives = 108/119 (90%)

Query:     5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
             HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct:   572 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 631

Query:    65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123
             P CLRSF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L+
Sbjct:   632 PYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD 690

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1MHX1 RFWD2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 514 (186.0 bits), Expect = 2.9e-49, P = 2.9e-49
 Identities = 91/119 (76%), Positives = 108/119 (90%)

Query:     5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
             HLAFG ADHCVHYYDLRNTK+ + VFKGHRKAVSY KF++ E+IVSASTDSQLKLWN+ K
Sbjct:   574 HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK 633

Query:    65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123
             P CLRSF GHIN+KNFVGLA++GDY+ACGSENNSLY+YYKGLSK +  ++FDTV+S+L+
Sbjct:   634 PYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLD 692

GO:0005925 "focal adhesion" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-070410-134 rfwd2 "ring finger and WD repeat domain 2" [Danio rerio (taxid:7955)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 91/119 (76%), Positives = 107/119 (89%)

Query:     5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
             HLAFG ADHCVHYYDLRN K+ + VFKGHRKAVSY KF+N  +IVSASTDSQLKLWN+NK
Sbjct:   533 HLAFGCADHCVHYYDLRNAKQPIMVFKGHRKAVSYAKFVNGGEIVSASTDSQLKLWNVNK 592

Query:    65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123
             P+CLRSF GHIN+KNFVGLA++GDYVACGSENNSLY+Y KGLSK +  ++FDTV+S+L+
Sbjct:   593 PHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYCKGLSKTLLTFKFDTVKSVLD 651

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

DICTYBASE|DDB_G0288453 DDB_G0288453 "E3 ubiquitin-protein ligase RFWD2" [Dictyostelium discoideum (taxid:44689)]

 Score = 423 (154.0 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 73/110 (66%), Positives = 92/110 (83%)

Query:     6 LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP 65
             +AFGSADH +HYYDLR  K+ L +FKGHRKAVSYVKF+NK++I+SASTDS LKLWN+N+ 
Sbjct:   816 IAFGSADHHIHYYDLRQYKDPLLIFKGHRKAVSYVKFMNKDEIISASTDSTLKLWNVNQN 875

Query:    66 NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF 115
             +C+R+F GH N+KNFVGL  +GDY+ CGSENN +Y YYK LSK +  +RF
Sbjct:   876 DCVRTFTGHSNEKNFVGLTVNGDYICCGSENNGVYTYYKTLSKPIVTHRF 925

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2059359 COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 1.6e-30, P = 1.6e-30
 Identities = 60/114 (52%), Positives = 87/114 (76%)

Query:     2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
             +S ++A GSADH +HYYDLRN  + L VF GH+KAVSYVKFL+  ++ SASTDS L+LW+
Sbjct:   517 SSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWD 576

Query:    62 INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF 115
             +     +R+F GH N+KNFVGL  + +Y+ACGSE N +Y+Y+K +++ + ++RF
Sbjct:   577 VKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRF 630

GO:0005634 "nucleus" evidence=ISM;IDA;IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009640 "photomorphogenesis" evidence=IGI;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0000152 "nuclear ubiquitin ligase complex" evidence=TAS

GO:0009647 "skotomorphogenesis" evidence=TAS

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0010119 "regulation of stomatal movement" evidence=IGI;IMP

GO:0046283 "anthocyanin-containing compound metabolic process" evidence=IMP

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

GO:0048573 "photoperiodism, flowering" evidence=IMP

GO:0006281 "DNA repair" evidence=RCA;IMP

GO:0009649 "entrainment of circadian clock" evidence=IMP

GO:0010100 "negative regulation of photomorphogenesis" evidence=RCA

GO:0048608 "reproductive structure development" evidence=RCA

GO:0009641 "shade avoidance" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9R1A8	RFWD2_MOUSE	6, ., 3, ., 2, ., -	0.5399	0.6968	0.2100	yes	N/A
Q8NHY2	RFWD2_HUMAN	6, ., 3, ., 2, ., -	0.5399	0.6968	0.2106	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	221
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	1e-37
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-18
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-17
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-17
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-11
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-10
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-08
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-05
smart00320	40	smart00320, WD40, WD40 repeats	0.003

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score =  138 bits (349), Expect = 1e-37
 Identities = 78/208 (37%), Positives = 103/208 (49%), Gaps = 51/208 (24%)

Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP 65
           LAFGSADH V+YYDLRN K  L    GH K VSYV+F++   +VS+STD+ LKLW     
Sbjct: 633 LAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLW----- 687

Query: 66  NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESS 125
                               D      G     L+                        S
Sbjct: 688 --------------------DLSMSISGINETPLH------------------------S 703

Query: 126 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD 185
           F+GH N KNFVGL+    Y+A GSE N +++Y+K     + +Y+F T+  +   +   DD
Sbjct: 704 FMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLE--VDD 761

Query: 186 TNEFVSAVCWRQLSRVLVAANSQGIIKI 213
            ++F+S+VCWR  S  LVAANS G IKI
Sbjct: 762 ASQFISSVCWRGQSSTLVAANSTGNIKI 789

Length = 793

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 80.5 bits (199), Expect = 4e-18
 Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 30/211 (14%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNIN 63
            LA GS D  +  +DL  T E L   KGH   V  V    +   + S S+D  ++LW++ 
Sbjct: 23  LLATGSGDGTIKVWDL-ETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE 81

Query: 64  KPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123
              C+R+  GH +  + V  + DG  ++  S + ++ +             +D       
Sbjct: 82  TGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKV-------------WDVETGKCL 128

Query: 124 SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE 183
           ++  GH +  N V  + DG +VA  S++ ++ ++     K +      T           
Sbjct: 129 TTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHT----------- 177

Query: 184 DDTNEFVSAVCWRQLSRVLVAANSQGIIKIY 214
                 V++V +      L++++S G IK++
Sbjct: 178 ----GEVNSVAFSPDGEKLLSSSSDGTIKLW 204

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 78.1 bits (193), Expect = 2e-17
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 15/153 (9%)

Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINK 64
           +A  S D  +  +DLR  K  +A   GH   V+ V F  + E ++S+S+D  +KLW+++ 
Sbjct: 150 VASSSQDGTIKLWDLRTGKC-VATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLST 208

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
             CL +  GH N  N V  + DG  +A GSE+ ++ +           +   T   +   
Sbjct: 209 GKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRV-----------WDLRTGECV--Q 255

Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157
           +  GH N    +  + DG  +A GS + ++ I+
Sbjct: 256 TLSGHTNSVTSLAWSPDGKRLASGSADGTIRIW 288

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 77.4 bits (191), Expect = 5e-17
 Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 30/210 (14%)

Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIV-SASTDSQLKLWNINK 64
           LA GS+D  +  +DL  T E +    GH   VS V F     I+ S+S D  +K+W++  
Sbjct: 66  LASGSSDKTIRLWDL-ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVET 124

Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
             CL +  GH +  N V  + DG +VA  S++ ++ ++             D       +
Sbjct: 125 GKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLW-------------DLRTGKCVA 171

Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
           +  GH  + N V  + DG+ +   S + ++ ++     K +   R               
Sbjct: 172 TLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGH------------- 218

Query: 185 DTNEFVSAVCWRQLSRVLVAANSQGIIKIY 214
                V++V +     +L + +  G I+++
Sbjct: 219 --ENGVNSVAFSPDGYLLASGSEDGTIRVW 246

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 2/102 (1%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLW 60
           +   L   S+D  +  +DL  T + L   +GH   V+ V F  +   + S S D  +++W
Sbjct: 188 DGEKLLSSSSDGTIKLWDLS-TGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVW 246

Query: 61  NINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
           ++    C+++  GH N    +  + DG  +A GS + ++ I+
Sbjct: 247 DLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIW 288

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 60.1 bits (144), Expect = 1e-10
 Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 30/216 (13%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED--IVSASTDSQLKL 59
           NS  LA  S D  V  +DL    + +   +GH ++V+ + F          +S D  +KL
Sbjct: 123 NSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKL 182

Query: 60  WNINKPNCLRSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTV 118
           W++     L +  GH +  + +  + DG   +A GS + ++ ++     K +        
Sbjct: 183 WDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLR------- 235

Query: 119 RSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 178
                S+  GH +       + DG  +A GS + ++ ++               +RS   
Sbjct: 236 -----STLSGHSDSVVSS-FSPDGSLLASGSSDGTIRLW--------------DLRSSSS 275

Query: 179 RDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIY 214
             R     +  V +V +    ++L + +S G ++++
Sbjct: 276 LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLW 311

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 53.6 bits (127), Expect = 2e-08
 Identities = 33/173 (19%), Positives = 72/173 (41%), Gaps = 13/173 (7%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
               +A GS+D  +  +DL   K   +   GH  +V      +   + S S+D  ++LW+
Sbjct: 210 GGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWD 269

Query: 62  INKP-NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS 120
           +    + LR+  GH +    V  + DG  +A GS + ++ +           +  +T + 
Sbjct: 270 LRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRL-----------WDLETGKL 318

Query: 121 MLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHMHAYRFDT 172
           +   +  GH    + +  + DG  +  G S++ ++ ++     K +      +
Sbjct: 319 LSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHS 371

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 45.5 bits (106), Expect = 1e-05
 Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 9   GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL 68
           GS D  +  +DL  T + L   +GH   +S     +   + S STD  ++LW+++  + L
Sbjct: 347 GSDDGTIRLWDL-RTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLL 405

Query: 69  RSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
           R+  GH +    +  + DG  +A GS +N++ ++
Sbjct: 406 RNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLW 439

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 34.2 bits (79), Expect = 0.003
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 23 TKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWN 61
          + E L   KGH   V+ V F      + S S D  +KLW+
Sbjct: 1  SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0263|consensus	707		100.0
KOG0272|consensus	459		100.0
KOG0271|consensus	480		100.0
KOG0279|consensus	315		100.0
KOG0315|consensus	311		100.0
KOG0263|consensus	707		100.0
KOG0286|consensus	343		100.0
KOG0273|consensus	524		100.0
KOG0286|consensus	343		100.0
KOG0279|consensus	315		100.0
KOG0266|consensus	456		100.0
KOG0315|consensus	311		100.0
KOG0295|consensus	406		100.0
KOG0266|consensus	456		100.0
KOG0285|consensus	460		100.0
KOG0284|consensus	464		100.0
KOG0284|consensus	464		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0291|consensus	893		100.0
KOG0276|consensus	794		100.0
KOG0295|consensus	406		100.0
KOG0282|consensus	503		100.0
KOG0291|consensus	893		100.0
KOG0265|consensus	338		100.0
KOG0277|consensus	311		100.0
KOG0645|consensus	312		100.0
KOG0281|consensus	499		100.0
KOG0316|consensus	307		100.0
KOG0318|consensus	603		100.0
KOG0318|consensus	603		100.0
KOG0275|consensus	508		100.0
KOG0645|consensus	312		100.0
KOG0273|consensus	524		100.0
KOG0285|consensus	460		100.0
KOG1407|consensus	313		100.0
KOG0319|consensus	775		100.0
KOG0319|consensus	775		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
PTZ00420	568	coronin; Provisional	100.0
KOG0643|consensus	327		100.0
KOG0292|consensus	1202		100.0
KOG0278|consensus	334		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
PTZ00421	493	coronin; Provisional	100.0
PTZ00420	568	coronin; Provisional	100.0
KOG0283|consensus	712		100.0
KOG0296|consensus	399		100.0
KOG0294|consensus	362		100.0
KOG0305|consensus	484		100.0
KOG0282|consensus	503		100.0
KOG0293|consensus	519		99.98
PLN00181	793	protein SPA1-RELATED; Provisional	99.98
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.98
KOG0640|consensus	430		99.98
KOG0264|consensus	422		99.98
KOG1446|consensus	311		99.97
KOG0289|consensus	506		99.97
KOG0292|consensus	1202		99.97
KOG0281|consensus	499		99.97
KOG0313|consensus	423		99.97
KOG0313|consensus	423		99.97
KOG0308|consensus	735		99.97
KOG0276|consensus	794		99.97
KOG0296|consensus	399		99.97
KOG0310|consensus	487		99.97
KOG0316|consensus	307		99.97
KOG0265|consensus	338		99.97
KOG0646|consensus	476		99.97
KOG0269|consensus	839		99.97
KOG1332|consensus	299		99.97
KOG0283|consensus	712		99.97
KOG0277|consensus	311		99.97
KOG0264|consensus	422		99.97
KOG0267|consensus	825		99.97
KOG0973|consensus	942		99.97
KOG0288|consensus	459		99.97
KOG0275|consensus	508		99.97
KOG0274|consensus	537		99.97
KOG0647|consensus	347		99.97
KOG4283|consensus	397		99.96
KOG0299|consensus	479		99.96
KOG0772|consensus	641		99.96
KOG0274|consensus	537		99.96
KOG0302|consensus	440		99.96
KOG0306|consensus	888		99.96
KOG0289|consensus	506		99.96
KOG0268|consensus	433		99.96
KOG1036|consensus	323		99.96
KOG0308|consensus	735		99.96
KOG0643|consensus	327		99.96
KOG0288|consensus	459		99.96
KOG1539|consensus	910		99.96
KOG1407|consensus	313		99.95
KOG1408|consensus	1080		99.95
KOG0305|consensus	484		99.95
KOG0306|consensus	888		99.95
KOG0640|consensus	430		99.95
KOG0639|consensus	705		99.95
KOG0973|consensus	942		99.95
KOG0300|consensus	481		99.95
KOG2445|consensus	361		99.95
KOG0269|consensus	839		99.95
KOG1274|consensus	933		99.94
KOG0267|consensus	825		99.94
KOG0270|consensus	463		99.94
KOG0310|consensus	487		99.94
KOG0641|consensus	350		99.94
KOG0301|consensus	745		99.94
KOG1273|consensus	405		99.94
KOG0302|consensus	440		99.94
KOG0301|consensus	745		99.94
KOG1332|consensus	299		99.94
KOG1034|consensus	385		99.94
KOG1446|consensus	311		99.94
KOG0772|consensus	641		99.93
KOG0268|consensus	433		99.93
KOG0294|consensus	362		99.93
KOG2048|consensus	691		99.93
KOG1036|consensus	323		99.93
KOG0278|consensus	334		99.93
KOG4378|consensus	673		99.93
KOG1539|consensus	910		99.92
KOG0270|consensus	463		99.92
KOG2106|consensus	626		99.92
KOG4283|consensus	397		99.92
KOG0303|consensus	472		99.92
KOG2096|consensus	420		99.92
KOG1007|consensus	370		99.92
KOG0647|consensus	347		99.92
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.91
KOG0639|consensus	705		99.91
KOG0299|consensus	479		99.91
KOG4328|consensus	498		99.91
KOG0293|consensus	519		99.91
KOG0300|consensus	481		99.91
KOG0641|consensus	350		99.91
KOG0321|consensus	720		99.91
KOG1273|consensus	405		99.91
KOG0642|consensus	577		99.91
KOG1188|consensus	376		99.9
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.9
KOG2055|consensus	514		99.9
KOG1274|consensus	933		99.9
KOG2055|consensus	514		99.9
KOG1408|consensus	1080		99.9
KOG1063|consensus	764		99.89
KOG0307|consensus	1049		99.89
KOG2048|consensus	691		99.89
KOG0322|consensus	323		99.89
KOG2096|consensus	420		99.89
KOG0646|consensus	476		99.89
KOG0321|consensus	720		99.89
KOG0649|consensus	325		99.89
KOG0307|consensus	1049		99.88
KOG0771|consensus	398		99.88
KOG2445|consensus	361		99.87
KOG1445|consensus	1012		99.87
KOG2110|consensus	391		99.87
KOG1445|consensus	1012		99.87
KOG2106|consensus	626		99.87
KOG2919|consensus	406		99.86
KOG0303|consensus	472		99.86
KOG1063|consensus	764		99.86
KOG1034|consensus	385		99.86
KOG1538|consensus	1081		99.85
KOG2110|consensus	391		99.85
KOG1009|consensus	434		99.85
KOG2394|consensus	636		99.84
KOG1523|consensus	361		99.84
KOG0290|consensus	364		99.84
COG2319	466	FOG: WD40 repeat [General function prediction only	99.84
KOG0650|consensus	733		99.84
KOG1009|consensus	434		99.83
KOG1007|consensus	370		99.83
KOG0644|consensus	1113		99.82
KOG0290|consensus	364		99.82
KOG0650|consensus	733		99.81
KOG2919|consensus	406		99.81
KOG1188|consensus	376		99.81
KOG1523|consensus	361		99.81
KOG4328|consensus	498		99.81
KOG1272|consensus	545		99.81
KOG4378|consensus	673		99.81
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.8
KOG1524|consensus	737		99.8
KOG1310|consensus	758		99.8
KOG1963|consensus	792		99.8
KOG3881|consensus	412		99.8
KOG2111|consensus	346		99.79
COG2319	466	FOG: WD40 repeat [General function prediction only	99.79
KOG1587|consensus	555		99.79
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.77
KOG0642|consensus	577		99.77
KOG1517|consensus	1387		99.76
PRK11028	330	6-phosphogluconolactonase; Provisional	99.76
KOG0322|consensus	323		99.76
KOG4227|consensus	609		99.75
KOG1963|consensus	792		99.75
KOG0771|consensus	398		99.75
KOG0649|consensus	325		99.75
KOG1310|consensus	758		99.75
KOG1272|consensus	545		99.74
KOG1240|consensus	1431		99.73
KOG1517|consensus	1387		99.73
KOG1587|consensus	555		99.73
KOG2394|consensus	636		99.72
KOG2111|consensus	346		99.72
PRK01742	429	tolB translocation protein TolB; Provisional	99.72
PRK11028	330	6-phosphogluconolactonase; Provisional	99.71
KOG2139|consensus	445		99.71
KOG4227|consensus	609		99.7
PRK01742	429	tolB translocation protein TolB; Provisional	99.7
KOG0644|consensus	1113		99.69
KOG3881|consensus	412		99.69
KOG2321|consensus	703		99.68
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.65
PRK03629	429	tolB translocation protein TolB; Provisional	99.65
PRK05137	435	tolB translocation protein TolB; Provisional	99.65
KOG1240|consensus	1431		99.65
KOG1538|consensus	1081		99.65
PRK04922	433	tolB translocation protein TolB; Provisional	99.65
KOG1524|consensus	737		99.65
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.64
KOG2321|consensus	703		99.64
PRK05137	435	tolB translocation protein TolB; Provisional	99.64
KOG4497|consensus	447		99.64
KOG0974|consensus	967		99.64
PRK02889	427	tolB translocation protein TolB; Provisional	99.62
PRK04922	433	tolB translocation protein TolB; Provisional	99.62
PRK03629	429	tolB translocation protein TolB; Provisional	99.61
PRK02889	427	tolB translocation protein TolB; Provisional	99.61
KOG1354|consensus	433		99.58
KOG4547|consensus	541		99.57
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.56
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.56
KOG0974|consensus	967		99.55
KOG1334|consensus	559		99.54
KOG4497|consensus	447		99.54
KOG1064|consensus	2439		99.53
KOG2139|consensus	445		99.53
KOG0280|consensus	339		99.51
KOG4532|consensus	344		99.5
KOG1409|consensus	404		99.48
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.46
PRK00178	430	tolB translocation protein TolB; Provisional	99.46
PRK00178	430	tolB translocation protein TolB; Provisional	99.46
PRK01029	428	tolB translocation protein TolB; Provisional	99.45
PRK04792	448	tolB translocation protein TolB; Provisional	99.44
KOG1409|consensus	404		99.42
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.42
PRK04792	448	tolB translocation protein TolB; Provisional	99.42
KOG3914|consensus	390		99.41
KOG1334|consensus	559		99.41
KOG4190|consensus	1034		99.4
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.4
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.39
KOG0280|consensus	339		99.36
KOG3914|consensus	390		99.36
KOG4714|consensus	319		99.36
KOG4547|consensus	541		99.35
COG4946	668	Uncharacterized protein related to the periplasmic	99.34
KOG2315|consensus	566		99.32
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.3
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.3
KOG4190|consensus	1034		99.3
KOG1064|consensus	2439		99.29
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.28
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.28
KOG2695|consensus	425		99.28
KOG0309|consensus	1081		99.28
PRK01029	428	tolB translocation protein TolB; Provisional	99.26
KOG2695|consensus	425		99.26
KOG0882|consensus	558		99.26
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.24
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.23
KOG1275|consensus	1118		99.23
COG4946	668	Uncharacterized protein related to the periplasmic	99.2
KOG4532|consensus	344		99.19
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.18
KOG2041|consensus	1189		99.17
PRK04043	419	tolB translocation protein TolB; Provisional	99.17
KOG2066|consensus	846		99.16
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.14
KOG2315|consensus	566		99.13
KOG4714|consensus	319		99.13
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	99.11
KOG0882|consensus	558		99.11
KOG1354|consensus	433		99.1
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.09
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.09
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.08
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.04
PRK04043	419	tolB translocation protein TolB; Provisional	99.04
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.03
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.02
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.0
KOG1912|consensus	1062		99.0
KOG1275|consensus	1118		98.98
KOG0309|consensus	1081		98.96
KOG2066|consensus	846		98.94
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.92
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.9
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.9
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.86
KOG2114|consensus	933		98.86
KOG2041|consensus	1189		98.83
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.81
KOG1832|consensus	1516		98.78
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.75
KOG1832|consensus	1516		98.75
KOG1645|consensus	463		98.75
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.74
KOG2314|consensus	698		98.73
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.72
KOG3617|consensus	1416		98.7
KOG2314|consensus	698		98.7
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.68
KOG1912|consensus	1062		98.64
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.61
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.58
KOG1920|consensus	1265		98.58
KOG1008|consensus	783		98.57
KOG3621|consensus	726		98.54
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.51
KOG3621|consensus	726		98.5
PRK02888	635	nitrous-oxide reductase; Validated	98.48
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.47
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.46
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.46
PRK02888	635	nitrous-oxide reductase; Validated	98.39
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.39
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.39
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.38
KOG2114|consensus	933		98.38
KOG1645|consensus	463		98.37
KOG4640|consensus	665		98.36
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	98.35
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.3
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.27
KOG4649|consensus	354		98.27
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.25
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.22
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.19
KOG3617|consensus	1416		98.18
KOG4640|consensus	665		98.17
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.15
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.14
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.14
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.05
KOG1920|consensus	1265		98.04
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.03
KOG1008|consensus	783		98.0
COG3391	381	Uncharacterized conserved protein [Function unknow	97.91
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.89
KOG2444|consensus	238		97.88
KOG2395|consensus	644		97.87
PHA02713	557	hypothetical protein; Provisional	97.84
KOG2395|consensus	644		97.82
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.8
KOG4649|consensus	354		97.79
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.77
KOG2444|consensus	238		97.75
KOG2079|consensus	1206		97.72
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.72
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.69
KOG2079|consensus	1206		97.69
COG3391	381	Uncharacterized conserved protein [Function unknow	97.68
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.64
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.61
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.56
PRK13616	591	lipoprotein LpqB; Provisional	97.55
KOG4441|consensus	571		97.48
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.42
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.41
PHA03098	534	kelch-like protein; Provisional	97.4
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.39
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	97.25
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.23
PRK13616	591	lipoprotein LpqB; Provisional	97.22
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.19
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	97.18
KOG2280|consensus	829		97.16
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.1
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.09
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.05
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.04
KOG4441|consensus	571		96.93
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.89
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	96.86
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	96.81
PHA02713	557	hypothetical protein; Provisional	96.78
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.73
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.73
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.72
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.71
PHA02790	480	Kelch-like protein; Provisional	96.69
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	96.68
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	96.56
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.54
KOG3630|consensus	1405		96.51
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	96.48
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.45
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	96.45
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.43
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.41
KOG4499|consensus	310		96.32
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.22
PF13449	326	Phytase-like: Esterase-like activity of phytase	96.2
COG5167	776	VID27 Protein involved in vacuole import and degra	96.14
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	96.13
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	96.13
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.09
KOG1900|consensus	1311		96.03
PHA03098	534	kelch-like protein; Provisional	96.03
KOG3630|consensus	1405		95.94
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	95.9
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	95.81
KOG1916|consensus	1283		95.68
COG5167	776	VID27 Protein involved in vacuole import and degra	95.67
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.61
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.53
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	95.41
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.37
KOG4499|consensus	310		95.36
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	95.26
KOG4460|consensus	741		95.26
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	95.15
KOG1916|consensus	1283		95.13
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.09
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	95.07
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	95.07
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	95.04
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	94.91
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	94.83
KOG2377|consensus	657		94.81
PRK13684	334	Ycf48-like protein; Provisional	94.64
PHA02790	480	Kelch-like protein; Provisional	94.64
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	94.57
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	94.52
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	94.13
COG4590	733	ABC-type uncharacterized transport system, permeas	94.1
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	94.0
KOG4460|consensus	741		93.81
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	93.79
KOG1897|consensus	1096		93.7
KOG2377|consensus	657		93.56
PF13449	326	Phytase-like: Esterase-like activity of phytase	93.5
COG4590	733	ABC-type uncharacterized transport system, permeas	93.32
KOG2280|consensus	829		93.23
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	93.22
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	93.21
PRK13684	334	Ycf48-like protein; Provisional	93.07
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	92.95
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	92.77
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	92.59
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	92.49
KOG1900|consensus	1311		92.48
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	92.48
PLN00033	398	photosystem II stability/assembly factor; Provisio	92.33
COG1520	370	FOG: WD40-like repeat [Function unknown]	92.3
PRK10115	686	protease 2; Provisional	92.06
PF14727	418	PHTB1_N: PTHB1 N-terminus	91.69
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	91.55
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	91.18
KOG2247|consensus	615		90.81
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	90.75
KOG2247|consensus	615		90.71
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	90.44
KOG1983|consensus	993		90.3
PLN00033	398	photosystem II stability/assembly factor; Provisio	90.17
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	90.04
KOG2109|consensus	788		89.93
KOG3522|consensus	925		89.55
KOG1897|consensus	1096		88.92
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	88.63
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	88.57
COG5308	1263	NUP170 Nuclear pore complex subunit [Intracellular	87.94
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	87.43
PLN02153	341	epithiospecifier protein	87.24
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	87.11
PF12768	281	Rax2: Cortical protein marker for cell polarity	87.07
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	86.82
PLN02193	470	nitrile-specifier protein	86.23
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	85.68
PF12768	281	Rax2: Cortical protein marker for cell polarity	85.39
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	85.13
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	85.1
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	84.64
PF01731	86	Arylesterase: Arylesterase; InterPro: IPR002640 Th	84.4
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	83.94
TIGR03032	335	conserved hypothetical protein TIGR03032. This pro	83.87
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	82.5
PF13570	40	PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.	82.41
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	82.24
PF14779	257	BBS1: Ciliary BBSome complex subunit 1	82.08
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	81.8
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	81.7
COG1520	370	FOG: WD40-like repeat [Function unknown]	80.85

>KOG0271|consensus

Probab=100.00  E-value=1.2e-43  Score=246.52  Aligned_cols=205  Identities=20%  Similarity=0.393  Sum_probs=181.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec------CCcEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN------KEDIVSASTDSQLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~   74 (221)
                      |||..||+|+.||.|++||..+..+....+.+|+..|++++|.|      .++|++++.||.++|||+..+.++..+.+|
T Consensus       167 PDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgH  246 (480)
T KOG0271|consen  167 PDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGH  246 (480)
T ss_pred             CCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccC
Confidence            89999999999999999999866677788999999999999975      356999999999999999999999999999


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE----------------------------------------
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR----------------------------------------  114 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------------------------------------  114 (221)
                      ..+|+|+.|--+ .++++|+.|++|++|+...++..++++                                        
T Consensus       247 T~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al  325 (480)
T KOG0271|consen  247 TASVTCVRWGGE-GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKAL  325 (480)
T ss_pred             ccceEEEEEcCC-ceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHH
Confidence            999999999744 489999999999999987776655443                                        


Q ss_pred             -------------------------eeccc-ceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeee
Q psy10662        115 -------------------------FDTVR-SMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY  168 (221)
Q Consensus       115 -------------------------~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~  168 (221)
                                               |++.. .+++..+.+|...|+.+.|+||++++|+++.|..|++||.++++.+..+
T Consensus       326 ~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasf  405 (480)
T KOG0271|consen  326 ERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASF  405 (480)
T ss_pred             HHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhh
Confidence                                     22222 2244567789999999999999999999999999999999999987766


Q ss_pred             eeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        169 RFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      .               +|-..|+.++|+.|.++|++||.|.++++|++++++|
T Consensus       406 R---------------GHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl  443 (480)
T KOG0271|consen  406 R---------------GHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKL  443 (480)
T ss_pred             h---------------hccceeEEEEeccCccEEEEcCCCceEEEEEeeeeee
Confidence            4               8999999999999999999999999999999999875

>KOG0272|consensus

Probab=100.00  E-value=2.2e-43  Score=247.40  Aligned_cols=191  Identities=18%  Similarity=0.286  Sum_probs=178.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC--C-cEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK--E-DIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      +|+..||||+.+|.+++|+.. ....+.++.+|.+.|.++.|+|.  + .+++|+.||++++|++.+..++..+.+|...
T Consensus       185 ~ds~~laT~swsG~~kvW~~~-~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~R  263 (459)
T KOG0272|consen  185 RDSKHLATGSWSGLVKVWSVP-QCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLAR  263 (459)
T ss_pred             cCCCeEEEeecCCceeEeecC-CcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhh
Confidence            478999999999999999998 66889999999999999999985  2 5999999999999999999999999999999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      |..++|+|+|++|++++.|.+-++||+++++.+..             ..+|...|.+++|.|||.++++|+.|..-+||
T Consensus       264 Vs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~-------------QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvW  330 (459)
T KOG0272|consen  264 VSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLL-------------QEGHSKGVFSIAFQPDGSLAATGGLDSLGRVW  330 (459)
T ss_pred             heeeeecCCCceeeecccccchhhcccccchhhHh-------------hcccccccceeEecCCCceeeccCccchhhee
Confidence            99999999999999999999999999998876543             37999999999999999999999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |++++.++..+.               +|...|.+++|+|+|..|+|||.|++++|||++.++
T Consensus       331 DlRtgr~im~L~---------------gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~  378 (459)
T KOG0272|consen  331 DLRTGRCIMFLA---------------GHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRS  378 (459)
T ss_pred             ecccCcEEEEec---------------ccccceeeEeECCCceEEeecCCCCcEEEeeecccc
Confidence            999999887775               899999999999999999999999999999998754

>KOG0263|consensus

Probab=100.00  E-value=9.7e-42  Score=255.08  Aligned_cols=189  Identities=21%  Similarity=0.393  Sum_probs=177.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |+.++|++++.|+++|+|.+. +..++..+++|..+|+.+.|+|- -+++|++.|++.++|......+.+.+.+|-+.|.
T Consensus       461 Pd~rfLlScSED~svRLWsl~-t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~  539 (707)
T KOG0263|consen  461 PDRRFLLSCSEDSSVRLWSLD-TWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVD  539 (707)
T ss_pred             ccccceeeccCCcceeeeecc-cceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccc
Confidence            788999999999999999998 78888899999999999999995 4599999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      |+.|+|+..|+++||.|.+|++||+.++..++.|             .+|.++|.+++|+|+|++|++|+.||.|.+||+
T Consensus       540 cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF-------------~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl  606 (707)
T KOG0263|consen  540 CVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF-------------TGHKGPVTALAFSPCGRYLASGDEDGLIKIWDL  606 (707)
T ss_pred             eEEECCcccccccCCCCceEEEEEcCCCcEEEEe-------------cCCCCceEEEEEcCCCceEeecccCCcEEEEEc
Confidence            9999999999999999999999999999887764             899999999999999999999999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+++.+..+.               +|.+.|.++.|+.+|..|++|+.|+.|++||+..
T Consensus       607 ~~~~~v~~l~---------------~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~  650 (707)
T KOG0263|consen  607 ANGSLVKQLK---------------GHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK  650 (707)
T ss_pred             CCCcchhhhh---------------cccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence            9888765553               7899999999999999999999999999999864

>KOG0272|consensus

Probab=100.00  E-value=5.7e-42  Score=240.35  Aligned_cols=189  Identities=23%  Similarity=0.301  Sum_probs=175.3

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      +..+|+|+.||++++|++. +..++..+.+|...|..++|+| +.+|+|++.|.+-++||++++..+....+|...|.++
T Consensus       231 ~~~lat~s~Dgtvklw~~~-~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~i  309 (459)
T KOG0272|consen  231 DLNLATASADGTVKLWKLS-QETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSI  309 (459)
T ss_pred             ccceeeeccCCceeeeccC-CCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhccccccccee
Confidence            5689999999999999998 6688999999999999999998 5568999999999999999999988889999999999


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      +|+|||.++++|+.|..-+|||++++.++..+             .+|..+|..++|+|+|..||+|+.|++++|||++.
T Consensus       310 af~~DGSL~~tGGlD~~~RvWDlRtgr~im~L-------------~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~  376 (459)
T KOG0272|consen  310 AFQPDGSLAATGGLDSLGRVWDLRTGRCIMFL-------------AGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM  376 (459)
T ss_pred             EecCCCceeeccCccchhheeecccCcEEEEe-------------cccccceeeEeECCCceEEeecCCCCcEEEeeecc
Confidence            99999999999999999999999999998764             89999999999999999999999999999999998


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEECCccc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ...++.+.               +|..-|+.++|+| .|.+|+|++.|+++++|.-++..
T Consensus       377 r~~ly~ip---------------AH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~  421 (459)
T KOG0272|consen  377 RSELYTIP---------------AHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWS  421 (459)
T ss_pred             cccceecc---------------cccchhhheEecccCCeEEEEcccCcceeeecCCCcc
Confidence            87766554               7999999999999 78999999999999999987653

>KOG0271|consensus

Probab=100.00  E-value=8.1e-41  Score=232.45  Aligned_cols=205  Identities=20%  Similarity=0.292  Sum_probs=174.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccc-eeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCL-RSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~-~~~~~~~~~v   78 (221)
                      |+|.+|++|+.|.++++||+. +..+..+.++|...|.|++|+|+ ..|++|+.||+|++||.++++++ ..+.+|...|
T Consensus       125 p~g~~l~tGsGD~TvR~WD~~-TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~I  203 (480)
T KOG0271|consen  125 PTGSRLVTGSGDTTVRLWDLD-TETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWI  203 (480)
T ss_pred             CCCceEEecCCCceEEeeccC-CCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccce
Confidence            789999999999999999998 78899999999999999999985 45999999999999999988765 5679999999


Q ss_pred             eEEEEeC-----CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         79 NFVGLAT-----DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        79 ~~~~~~~-----~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      ++++|.|     ...++|+++.||.|+|||+..++++..+             .+|..+|+|+.|--+| +|++|+.|++
T Consensus       204 t~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l-------------sgHT~~VTCvrwGG~g-liySgS~Drt  269 (480)
T KOG0271|consen  204 TALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL-------------SGHTASVTCVRWGGEG-LIYSGSQDRT  269 (480)
T ss_pred             eEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe-------------ccCccceEEEEEcCCc-eEEecCCCce
Confidence            9999975     5678999999999999999988887664             8999999999998665 8999999999


Q ss_pred             EEEEEcCCCCceeeee---------------------eecccc-------------------------------------
Q psy10662        154 LYIYYKGLSKHMHAYR---------------------FDTVRS-------------------------------------  175 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~---------------------~~~~~~-------------------------------------  175 (221)
                      |++|+...+.....+.                     |++.+.                                     
T Consensus       270 Ikvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlf  349 (480)
T KOG0271|consen  270 IKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLF  349 (480)
T ss_pred             EEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEE
Confidence            9999987655443332                     111110                                     


Q ss_pred             ------cccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        176 ------MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       176 ------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                            ...++....+|..-|+.+.||||+++++++|.|..|++|+-.+|+
T Consensus       350 lW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk  400 (480)
T KOG0271|consen  350 LWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGK  400 (480)
T ss_pred             EecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcc
Confidence                  011233456899999999999999999999999999999999986

>KOG0279|consensus

Probab=100.00  E-value=3.3e-39  Score=215.75  Aligned_cols=188  Identities=23%  Similarity=0.334  Sum_probs=164.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecc--ccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGH--IND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~--~~~   77 (221)
                      +||++.++++.|+.+++||+. +++..+.|.+|...|.+++|++ +.++++|+.|.+|++|++.. .+..++..+  .+.
T Consensus        73 ~dg~~alS~swD~~lrlWDl~-~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~W  150 (315)
T KOG0279|consen   73 SDGNFALSASWDGTLRLWDLA-TGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREW  150 (315)
T ss_pred             cCCceEEeccccceEEEEEec-CCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecc-cEEEEEecCCCcCc
Confidence            689999999999999999998 6788999999999999999997 56699999999999999854 444444333  678


Q ss_pred             eeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         78 KNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        78 v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      |.|+.|+|+  ..+|++++.|++|++||+++.+....             +.+|.+.++.++++|||.+.++|+.||.+.
T Consensus       151 VscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~-------------~~gh~~~v~t~~vSpDGslcasGgkdg~~~  217 (315)
T KOG0279|consen  151 VSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTT-------------FIGHSGYVNTVTVSPDGSLCASGGKDGEAM  217 (315)
T ss_pred             EEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhc-------------cccccccEEEEEECCCCCEEecCCCCceEE
Confidence            999999998  56899999999999999987766544             589999999999999999999999999999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +||++.++.++.+                +|...|.+++|+|+.-+|+.+... .|+|||+.++.
T Consensus       218 LwdL~~~k~lysl----------------~a~~~v~sl~fspnrywL~~at~~-sIkIwdl~~~~  265 (315)
T KOG0279|consen  218 LWDLNEGKNLYSL----------------EAFDIVNSLCFSPNRYWLCAATAT-SIKIWDLESKA  265 (315)
T ss_pred             EEEccCCceeEec----------------cCCCeEeeEEecCCceeEeeccCC-ceEEEeccchh
Confidence            9999999987776                477899999999998888777654 59999999865

>KOG0315|consensus

Probab=100.00  E-value=1.3e-38  Score=210.07  Aligned_cols=204  Identities=20%  Similarity=0.282  Sum_probs=169.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce-eeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE-ALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      ||++.||+|+.- .|++||+++... ++.++.+|...|+++.|. .+..+++|++||+++|||++...+.+.+. |..+|
T Consensus        50 pdk~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spV  127 (311)
T KOG0315|consen   50 PDKKDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPV  127 (311)
T ss_pred             CCcchhhhccCC-eeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCc
Confidence            678888888654 799999985444 789999999999999999 46669999999999999999977776664 78999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEE-----------E-------------------eec------cccee
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY-----------R-------------------FDT------VRSML  122 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-----------~-------------------~~~------~~~~~  122 (221)
                      +++..+|+...|++|..+|.|++||+....+...+           .                   |+.      ..-.+
T Consensus       128 n~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P  207 (311)
T KOG0315|consen  128 NTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEP  207 (311)
T ss_pred             ceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceE
Confidence            99999999999999999999999998766332222           1                   221      12234


Q ss_pred             EeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE
Q psy10662        123 ESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL  202 (221)
Q Consensus       123 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  202 (221)
                      +..++.|...+..+.+||++++|++++.|.+++||+.+.. ...             ...+.+|..++..++||.||+||
T Consensus       208 ~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kl-------------e~~l~gh~rWvWdc~FS~dg~Yl  273 (311)
T KOG0315|consen  208 VHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKL-------------ELVLTGHQRWVWDCAFSADGEYL  273 (311)
T ss_pred             hhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-eee-------------EEEeecCCceEEeeeeccCccEE
Confidence            5667889999999999999999999999999999998765 111             11234788999999999999999


Q ss_pred             EEecCCCeEEEEECCccc
Q psy10662        203 VAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       203 ~~~~~dg~i~iw~~~~~~  220 (221)
                      ++|+.|+..++|+++.++
T Consensus       274 vTassd~~~rlW~~~~~k  291 (311)
T KOG0315|consen  274 VTASSDHTARLWDLSAGK  291 (311)
T ss_pred             EecCCCCceeecccccCc
Confidence            999999999999999876

>KOG0263|consensus

Probab=100.00  E-value=2.2e-38  Score=237.18  Aligned_cols=193  Identities=25%  Similarity=0.426  Sum_probs=174.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc------------------------------eeeEEEEeccCceEEEEEecC-CcEE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK------------------------------EALAVFKGHRKAVSYVKFLNK-EDIV   49 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~------------------------------~~~~~~~~~~~~i~~~~~~~~-~~l~   49 (221)
                      +|+.+||.|-.|..|++|.+.+.+                              ....++.+|.++|....|+|+ ++|+
T Consensus       388 ddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLl  467 (707)
T KOG0263|consen  388 DDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFLL  467 (707)
T ss_pred             CCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeeccccccee
Confidence            477899999999999999987311                              123557889999999999985 5699


Q ss_pred             EecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEe
Q psy10662         50 SASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH  129 (221)
Q Consensus        50 s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (221)
                      +++.|+++++|.+.+..++..+++|..+|+.+.|+|.|-|||+++.|++.++|.....++.+.             +.+|
T Consensus       468 ScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRi-------------fagh  534 (707)
T KOG0263|consen  468 SCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRI-------------FAGH  534 (707)
T ss_pred             eccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhh-------------hccc
Confidence            999999999999999999999999999999999999999999999999999999887666654             5899


Q ss_pred             eCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC
Q psy10662        130 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG  209 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  209 (221)
                      .+.|.|++|+|+..++++|+.|.++++||..++.....+.               +|..+|.+++|||+|++|++|+.||
T Consensus       535 lsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~---------------GH~~~V~al~~Sp~Gr~LaSg~ed~  599 (707)
T KOG0263|consen  535 LSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFT---------------GHKGPVTALAFSPCGRYLASGDEDG  599 (707)
T ss_pred             ccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEec---------------CCCCceEEEEEcCCCceEeecccCC
Confidence            9999999999999999999999999999999998877664               8999999999999999999999999


Q ss_pred             eEEEEECCcccC
Q psy10662        210 IIKIYVIPIRVL  221 (221)
Q Consensus       210 ~i~iw~~~~~~l  221 (221)
                      .|++||+.++++
T Consensus       600 ~I~iWDl~~~~~  611 (707)
T KOG0263|consen  600 LIKIWDLANGSL  611 (707)
T ss_pred             cEEEEEcCCCcc
Confidence            999999998753

>KOG0286|consensus

Probab=100.00  E-value=4.9e-37  Score=206.76  Aligned_cols=193  Identities=22%  Similarity=0.333  Sum_probs=176.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCC-----ceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNT-----KEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      |.|+++|+|+.|+...||++...     .+..+.+.+|.+.+.|+.|.++++|+|++.|.++.+||+++++.+..+.+|.
T Consensus       107 PSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~  186 (343)
T KOG0286|consen  107 PSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHT  186 (343)
T ss_pred             CCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCc
Confidence            78999999999999999999732     1455678999999999999999999999999999999999999999999999


Q ss_pred             cceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         76 NDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        76 ~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      +.|.+++++| +++.+++|+-|+..++||++.+..+++|             .+|...|++++|.|+|.-+++|++|++.
T Consensus       187 gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF-------------~ghesDINsv~ffP~G~afatGSDD~tc  253 (343)
T KOG0286|consen  187 GDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTF-------------EGHESDINSVRFFPSGDAFATGSDDATC  253 (343)
T ss_pred             ccEEEEecCCCCCCeEEecccccceeeeeccCcceeEee-------------cccccccceEEEccCCCeeeecCCCcee
Confidence            9999999999 8999999999999999999998877664             8999999999999999999999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++||++....+..|.-             .....+|++++||..|++|++|..|..+.+||.-.+
T Consensus       254 RlyDlRaD~~~a~ys~-------------~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~  305 (343)
T KOG0286|consen  254 RLYDLRADQELAVYSH-------------DSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKG  305 (343)
T ss_pred             EEEeecCCcEEeeecc-------------CcccCCceeEEEcccccEEEeeecCCceeEeecccc
Confidence            9999999888877741             134567999999999999999999999999998654

>KOG0273|consensus

Probab=100.00  E-value=1.2e-37  Score=221.55  Aligned_cols=190  Identities=19%  Similarity=0.313  Sum_probs=168.6

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCc--------------
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPN--------------   66 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~--------------   66 (221)
                      +|..||+|+.||.++||+..  +..+.++..|+++|.++.|+. +.+|++++.|+++.+||..+++              
T Consensus       246 ~G~~LatG~~~G~~riw~~~--G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lD  323 (524)
T KOG0273|consen  246 DGTLLATGSEDGEARIWNKD--GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALD  323 (524)
T ss_pred             CCCeEEEeecCcEEEEEecC--chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccc
Confidence            68999999999999999976  777889999999999999994 7789999999999999985442              


Q ss_pred             ---------------------------cceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeeccc
Q psy10662         67 ---------------------------CLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVR  119 (221)
Q Consensus        67 ---------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  119 (221)
                                                 ++.++.+|.++|.++.|+|.+.+|++++.|++++||.+........       
T Consensus       324 VdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~-------  396 (524)
T KOG0273|consen  324 VDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHD-------  396 (524)
T ss_pred             eEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhh-------
Confidence                                       2344558999999999999999999999999999999876655544       


Q ss_pred             ceeEeeEEEeeCceEEEEEecCC---------CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662        120 SMLESSFVGHINDKNFVGLATDG---------DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV  190 (221)
Q Consensus       120 ~~~~~~~~~~~~~v~~~~~~~~~---------~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  190 (221)
                            +..|...|..+.|+|.|         ..+++++.|++|++||+..+.++..+.               .|..+|
T Consensus       397 ------l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~---------------kH~~pV  455 (524)
T KOG0273|consen  397 ------LQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLM---------------KHQEPV  455 (524)
T ss_pred             ------hhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeec---------------cCCCce
Confidence                  57899999999999854         479999999999999999998887763               799999


Q ss_pred             eEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        191 SAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       191 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      ++++|+|+|++|++|+.||.|++|+.++++|
T Consensus       456 ysvafS~~g~ylAsGs~dg~V~iws~~~~~l  486 (524)
T KOG0273|consen  456 YSVAFSPNGRYLASGSLDGCVHIWSTKTGKL  486 (524)
T ss_pred             EEEEecCCCcEEEecCCCCeeEeccccchhe
Confidence            9999999999999999999999999999875

>KOG0286|consensus

Probab=100.00  E-value=4.5e-37  Score=206.92  Aligned_cols=187  Identities=20%  Similarity=0.342  Sum_probs=171.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |..+|+|++.|.+..+||++ +++.+..|.+|.+.|.++.++|  .+.+++|+.|+..++||++.+.+++.|.+|...|+
T Consensus       155 dD~~ilT~SGD~TCalWDie-~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDIN  233 (343)
T KOG0286|consen  155 DDNHILTGSGDMTCALWDIE-TGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDIN  233 (343)
T ss_pred             CCCceEecCCCceEEEEEcc-cceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccc
Confidence            56789999999999999999 8899999999999999999998  46699999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++|.|+|.-|++|++|++.++||++..+.+..+.           .......|++++|+..|++|.+|..|..+.+||.
T Consensus       234 sv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys-----------~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt  302 (343)
T KOG0286|consen  234 SVRFFPSGDAFATGSDDATCRLYDLRADQELAVYS-----------HDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT  302 (343)
T ss_pred             eEEEccCCCeeeecCCCceeEEEeecCCcEEeeec-----------cCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence            99999999999999999999999999988887762           2334568999999999999999999999999998


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      -.++....+               .+|+..|.++..+|||..+++||.|..++||.
T Consensus       303 lk~e~vg~L---------------~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  303 LKGERVGVL---------------AGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             cccceEEEe---------------eccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            776665544               38999999999999999999999999999994

>KOG0279|consensus

Probab=100.00  E-value=1.9e-36  Score=202.64  Aligned_cols=192  Identities=18%  Similarity=0.219  Sum_probs=167.1

Q ss_pred             CCceEEEEeCCCeEEEEEecC----CceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRN----TKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~----~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      +.+.+++++.|..+.+|++..    .+.+++.+.+|+..|..+..++ +++.++++.|+++++||+.+++..+.|.+|..
T Consensus        27 ~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~  106 (315)
T KOG0279|consen   27 NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTK  106 (315)
T ss_pred             CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCC
Confidence            357899999999999999973    2567889999999999999996 56688999999999999999999999999999


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC--CCEEEEecCCCeE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD--GDYVACGSENNSL  154 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i  154 (221)
                      .|.+++|+|+...+++|+.|.+|++|++........            .-..+...|.++.|+|+  ..+|++++.|++|
T Consensus       107 dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~------------~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dktv  174 (315)
T KOG0279|consen  107 DVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTI------------HEDSHREWVSCVRFSPNESNPIIVSASWDKTV  174 (315)
T ss_pred             ceEEEEecCCCceeecCCCcceeeeeeecccEEEEE------------ecCCCcCcEEEEEEcCCCCCcEEEEccCCceE
Confidence            999999999999999999999999999865443221            11223678999999997  6799999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++||+++-+....+               .+|...++.+++||||.++++|+.||.+.+||+..++
T Consensus       175 KvWnl~~~~l~~~~---------------~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k  225 (315)
T KOG0279|consen  175 KVWNLRNCQLRTTF---------------IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGK  225 (315)
T ss_pred             EEEccCCcchhhcc---------------ccccccEEEEEECCCCCEEecCCCCceEEEEEccCCc
Confidence            99999877765544               3799999999999999999999999999999998765

>KOG0266|consensus

Probab=100.00  E-value=2.5e-35  Score=222.91  Aligned_cols=193  Identities=19%  Similarity=0.350  Sum_probs=169.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEc-CCCccceeeecccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNI-NKPNCLRSFVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~-~~~~~~~~~~~~~~   76 (221)
                      |+|+.+++++.++.+++|+.. ..+  ....+.+|...|.+++|+|++ .+++++.|++|++||+ ..+..++.+.+|..
T Consensus       169 ~~g~~l~~~~~~~~i~~~~~~-~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~  247 (456)
T KOG0266|consen  169 PDGRALAAASSDGLIRIWKLE-GIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHST  247 (456)
T ss_pred             CCCCeEEEccCCCcEEEeecc-cccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCC
Confidence            689999999999999999996 455  667778899999999999865 6999999999999999 55588899999999


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      .|++++|+|+++++++|+.|++|+|||+++++++..             +.+|...|++++|++++++|++++.|+.|++
T Consensus       248 ~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~-------------l~~hs~~is~~~f~~d~~~l~s~s~d~~i~v  314 (456)
T KOG0266|consen  248 YVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRK-------------LKGHSDGISGLAFSPDGNLLVSASYDGTIRV  314 (456)
T ss_pred             ceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEe-------------eeccCCceEEEEECCCCCEEEEcCCCccEEE
Confidence            999999999999999999999999999999887766             4899999999999999999999999999999


Q ss_pred             EEcCCCCce--eeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        157 YYKGLSKHM--HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       157 ~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ||+.++...  ..+.            ...... +++.++|+|++.+|++++.|+.+++|++..++
T Consensus       315 wd~~~~~~~~~~~~~------------~~~~~~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~  367 (456)
T KOG0266|consen  315 WDLETGSKLCLKLLS------------GAENSA-PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGK  367 (456)
T ss_pred             EECCCCceeeeeccc------------CCCCCC-ceeEEEECCCCcEEEEecCCCeEEEEEccCCc
Confidence            999988732  2221            111222 69999999999999999999999999998764

>KOG0315|consensus

Probab=100.00  E-value=3.5e-35  Score=193.92  Aligned_cols=201  Identities=18%  Similarity=0.252  Sum_probs=169.9

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCc--cceeeeccccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN--CLRSFVGHINDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~   80 (221)
                      .-+|++++.|.+|++|... ++.+.++++...+.|..+...|++..++++....|++||++++.  ++.++.+|...|++
T Consensus        10 ~viLvsA~YDhTIRfWqa~-tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVta   88 (311)
T KOG0315|consen   10 PVILVSAGYDHTIRFWQAL-TGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTA   88 (311)
T ss_pred             ceEEEeccCcceeeeeehh-cCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEE
Confidence            3579999999999999998 89999999977889999999998887777778899999998764  57889999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      +.|..+|+.+++|++||+++|||++.....+.+              .+..+|+++..+|+...|++|..+|.|++||+.
T Consensus        89 VgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~--------------~~~spVn~vvlhpnQteLis~dqsg~irvWDl~  154 (311)
T KOG0315|consen   89 VGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY--------------QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLG  154 (311)
T ss_pred             EEEeecCeEEEecCCCceEEEEeccCcccchhc--------------cCCCCcceEEecCCcceEEeecCCCcEEEEEcc
Confidence            999999999999999999999999986665543              566889999999999999999999999999987


Q ss_pred             CCCceeee-----------eeec-----------------------ccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        161 LSKHMHAY-----------RFDT-----------------------VRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       161 ~~~~~~~~-----------~~~~-----------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      ...+...+           ....                       ....+.++..+..|+..+..+.+|||+++|+++|
T Consensus       155 ~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~s  234 (311)
T KOG0315|consen  155 ENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCS  234 (311)
T ss_pred             CCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeec
Confidence            65432222           1111                       1123345566778999999999999999999999


Q ss_pred             CCCeEEEEECCc
Q psy10662        207 SQGIIKIYVIPI  218 (221)
Q Consensus       207 ~dg~i~iw~~~~  218 (221)
                      .|.+++||+.++
T Consensus       235 sdktv~iwn~~~  246 (311)
T KOG0315|consen  235 SDKTVKIWNTDD  246 (311)
T ss_pred             CCceEEEEecCC
Confidence            999999999875

>KOG0295|consensus

Probab=100.00  E-value=5.7e-36  Score=206.87  Aligned_cols=204  Identities=15%  Similarity=0.288  Sum_probs=180.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCC-Cccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINK-PNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~~~~v   78 (221)
                      |+-.++++++.|++|++||.. +++....+++|.+.+..++|+. +..+++++.|-.+++||..+ .++++.+.+|+..|
T Consensus       118 p~~~~v~~as~d~tikv~D~~-tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~v  196 (406)
T KOG0295|consen  118 PSEALVVSASEDATIKVFDTE-TGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGV  196 (406)
T ss_pred             cCceEEEEecCCceEEEEEcc-chhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccce
Confidence            455678899999999999998 7888999999999999999995 67799999999999999987 57788888999999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------------eecccceeEeeEEEe
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRSMLESSFVGH  129 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~  129 (221)
                      .++.|-|.|+++++++.|.+|+.|++.++-+++++.                             |-....++...+..|
T Consensus       197 S~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~h  276 (406)
T KOG0295|consen  197 SSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREH  276 (406)
T ss_pred             eeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhcc
Confidence            999999999999999999999999999999988876                             233333344556788


Q ss_pred             eCceEEEEEecC---------------CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEE
Q psy10662        130 INDKNFVGLATD---------------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVC  194 (221)
Q Consensus       130 ~~~v~~~~~~~~---------------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  194 (221)
                      ..+|.+++|.|.               ++++.+++.|++|++||+.++.++.++.               +|..+|..++
T Consensus       277 Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~---------------ghdnwVr~~a  341 (406)
T KOG0295|consen  277 EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLV---------------GHDNWVRGVA  341 (406)
T ss_pred             ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEe---------------cccceeeeeE
Confidence            889999999762               2589999999999999999998887775               8999999999


Q ss_pred             EcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        195 WRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       195 ~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |+|.|+||+++..|+++++||+++++
T Consensus       342 f~p~Gkyi~ScaDDktlrvwdl~~~~  367 (406)
T KOG0295|consen  342 FSPGGKYILSCADDKTLRVWDLKNLQ  367 (406)
T ss_pred             EcCCCeEEEEEecCCcEEEEEeccce
Confidence            99999999999999999999998764

>KOG0266|consensus

Probab=100.00  E-value=9.9e-35  Score=219.64  Aligned_cols=192  Identities=18%  Similarity=0.356  Sum_probs=168.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ||++++++|+.|++|+|||+...+..++++.+|...|++++|+|. +.+++|+.|++|++||+++++++..+.+|...|.
T Consensus       213 ~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is  292 (456)
T KOG0266|consen  213 PDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGIS  292 (456)
T ss_pred             CCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceE
Confidence            689999999999999999996467899999999999999999985 4699999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCee--eEEEEeecccceeEeeEEEeeC--ceEEEEEecCCCEEEEecCCCeEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKH--MHAYRFDTVRSMLESSFVGHIN--DKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      +++|++++.++++++.|+.|++||+.+++.  ...             +.++..  .++++.|+|++.+++++..|+.++
T Consensus       293 ~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~-------------~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~  359 (456)
T KOG0266|consen  293 GLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKL-------------LSGAENSAPVTSVQFSPNGKYLLSASLDRTLK  359 (456)
T ss_pred             EEEECCCCCEEEEcCCCccEEEEECCCCceeeeec-------------ccCCCCCCceeEEEECCCCcEEEEecCCCeEE
Confidence            999999999999999999999999999884  333             233333  589999999999999999999999


Q ss_pred             EEEcCCCCceeeeeeeccccccccccccccccc---ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNE---FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +||+..+.....+.               +|..   .+.+...++.+.++++|+.|+.|++|++.++.
T Consensus       360 ~w~l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~  412 (456)
T KOG0266|consen  360 LWDLRSGKSVGTYT---------------GHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGG  412 (456)
T ss_pred             EEEccCCcceeeec---------------ccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccc
Confidence            99999888776664               2322   34555668899999999999999999998754

>KOG0285|consensus

Probab=100.00  E-value=2.2e-35  Score=204.07  Aligned_cols=190  Identities=22%  Similarity=0.339  Sum_probs=175.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |-...|++|+.|++|+|||+. ++++..++.+|...|..+++++ .-++++++.|+.|+.||++..+.++.+.+|-+.|.
T Consensus       161 P~n~wf~tgs~DrtikIwDla-tg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~  239 (460)
T KOG0285|consen  161 PGNEWFATGSADRTIKIWDLA-TGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVY  239 (460)
T ss_pred             CCceeEEecCCCceeEEEEcc-cCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeE
Confidence            456789999999999999999 8999999999999999999997 56799999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      |++.+|.-+.+++|+.|.++++||+++...+..             +.+|..+|..+.+.|-...+++|+.|++|++||+
T Consensus       240 ~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~-------------l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl  306 (460)
T KOG0285|consen  240 CLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHV-------------LSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDL  306 (460)
T ss_pred             EEeccccceeEEecCCcceEEEeeecccceEEE-------------ecCCCCcceeEEeecCCCceEEecCCceEEEeee
Confidence            999999999999999999999999999887766             4899999999999998788999999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.++....+.               .|...|.+++.+|....+++++.|. |+-|+++.|+
T Consensus       307 ~agkt~~tlt---------------~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~  351 (460)
T KOG0285|consen  307 RAGKTMITLT---------------HHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGE  351 (460)
T ss_pred             ccCceeEeee---------------cccceeeEEecCCchhhhhccCCcc-ceeccCCccc
Confidence            9888765553               6888999999999999999999885 8999998775

>KOG0284|consensus

Probab=100.00  E-value=8e-37  Score=213.91  Aligned_cols=187  Identities=19%  Similarity=0.363  Sum_probs=168.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEecc-CceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-KAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      +++..+++|+.+|.|++|+..  ...++.+++|. ..|++++|+| +..+++++.||+|+|||....+....+.+|.-.|
T Consensus       148 ~~g~wmiSgD~gG~iKyWqpn--mnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdV  225 (464)
T KOG0284|consen  148 HNGTWMISGDKGGMIKYWQPN--MNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDV  225 (464)
T ss_pred             cCCCEEEEcCCCceEEecccc--hhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCc
Confidence            478999999999999999986  44556666655 8999999997 6779999999999999999998888899999999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      .+++|+|...++++++.|+.|++||.++++++.++             .+|...|..+.|+|++++|++++.|..++++|
T Consensus       226 ksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tl-------------h~HKntVl~~~f~~n~N~Llt~skD~~~kv~D  292 (464)
T KOG0284|consen  226 KSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATL-------------HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFD  292 (464)
T ss_pred             ceeccCCccceeEEccCCceeEeecCCCcchhhhh-------------hhccceEEEEEEcCCCCeeEEccCCceEEEEe
Confidence            99999999999999999999999999999888764             89999999999999999999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEECC
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +++.+.++.+               .+|...|+++.|+| ...+|.+|+.||.|..|.+.
T Consensus       293 iR~mkEl~~~---------------r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~  337 (464)
T KOG0284|consen  293 IRTMKELFTY---------------RGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVG  337 (464)
T ss_pred             hhHhHHHHHh---------------hcchhhheeeccccccccceeeccCCCceEEEecc
Confidence            9866665555               48999999999999 56788999999999999987

>KOG0284|consensus

Probab=100.00  E-value=1e-35  Score=208.35  Aligned_cols=188  Identities=21%  Similarity=0.365  Sum_probs=168.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |+...+++++.||+|+|||.. ..+....+.+|.-.|.++.|+| .+.+++++.|..|++||.+++.++.++..|+..|.
T Consensus       190 pnDskF~t~SdDg~ikiWdf~-~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl  268 (464)
T KOG0284|consen  190 PNDSKFLTCSDDGTIKIWDFR-MPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVL  268 (464)
T ss_pred             CCCceeEEecCCCeEEEEecc-CCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEE
Confidence            567789999999999999998 6667778899999999999998 57799999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d  158 (221)
                      .+.|+|++++|+++|.|..++++|+++.+.+..+             .+|...+++++|+| ...+|.+|+.||.|..|.
T Consensus       269 ~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~-------------r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~  335 (464)
T KOG0284|consen  269 AVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTY-------------RGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWV  335 (464)
T ss_pred             EEEEcCCCCeeEEccCCceEEEEehhHhHHHHHh-------------hcchhhheeeccccccccceeeccCCCceEEEe
Confidence            9999999999999999999999999977776654             78999999999999 566899999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      +...+++..+.              .+|...|.+++|+|-|.+|++|+.|.++++|.-
T Consensus       336 v~~~~p~~~i~--------------~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r  379 (464)
T KOG0284|consen  336 VGLEEPLGEIP--------------PAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR  379 (464)
T ss_pred             ccccccccCCC--------------cccccceeeeeccccceeEeecCCCcceeeecc
Confidence            87554443332              378999999999999999999999999999964

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=1e-32  Score=208.49  Aligned_cols=193  Identities=13%  Similarity=0.189  Sum_probs=156.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc------eeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCccceeeec
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK------EALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~------~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      ++++|++|+.|++|++||+...+      .++..+.+|...|.+++|+|.  +.|++++.|++|++||+++++.+..+..
T Consensus        87 d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~  166 (493)
T PTZ00421         87 DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKC  166 (493)
T ss_pred             CCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcC
Confidence            67899999999999999997332      356788899999999999984  4699999999999999999998888888


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc-eEEEEEecCCCEEEEec---
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND-KNFVGLATDGDYVACGS---  149 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~---  149 (221)
                      |...|.+++|+|++.+|++++.|+.|++||+++++.+..+             .+|... ...+.|.+++..+++++   
T Consensus       167 h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl-------------~~H~~~~~~~~~w~~~~~~ivt~G~s~  233 (493)
T PTZ00421        167 HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSV-------------EAHASAKSQRCLWAKRKDLIITLGCSK  233 (493)
T ss_pred             CCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEE-------------ecCCCCcceEEEEcCCCCeEEEEecCC
Confidence            9999999999999999999999999999999988776553             555543 34677888877777654   


Q ss_pred             -CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662        150 -ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       150 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~  220 (221)
                       .|+.|++||++.........            . ..+...+....|++++++|++++ .|+.|++||+.+++
T Consensus       234 s~Dr~VklWDlr~~~~p~~~~------------~-~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~  293 (493)
T PTZ00421        234 SQQRQIMLWDTRKMASPYSTV------------D-LDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER  293 (493)
T ss_pred             CCCCeEEEEeCCCCCCceeEe------------c-cCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence             47999999997654221110            0 01233456678999999999887 59999999998765

>KOG0291|consensus

Probab=100.00  E-value=3.1e-33  Score=209.35  Aligned_cols=206  Identities=18%  Similarity=0.281  Sum_probs=166.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCcc------------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNC------------   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~------------   67 (221)
                      |||+++|||+.||.|+|||.. .+-+..++..|.+.|+.+.|+. ++.+++.+.||+|+.||+...+.            
T Consensus       360 pDgq~iaTG~eDgKVKvWn~~-SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~Qf  438 (893)
T KOG0291|consen  360 PDGQLIATGAEDGKVKVWNTQ-SGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQF  438 (893)
T ss_pred             CCCcEEEeccCCCcEEEEecc-CceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceee
Confidence            799999999999999999998 7889999999999999999995 66699999999999999864332            


Q ss_pred             --------------------------------ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCe-eeEEEE
Q psy10662         68 --------------------------------LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK-HMHAYR  114 (221)
Q Consensus        68 --------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~  114 (221)
                                                      +-.+.+|+++|.+++|+|.+..|++++.|.+|++||+-... .+.+  
T Consensus       439 scvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEt--  516 (893)
T KOG0291|consen  439 SCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVET--  516 (893)
T ss_pred             eEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeee--
Confidence                                            22334899999999999999999999999999999974332 2211  


Q ss_pred             eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeee----ccccccccc-ccccccccc
Q psy10662        115 FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD----TVRSMLERD-RNEDDTNEF  189 (221)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~  189 (221)
                                  ..+...+..++|+|+|+.|++++-||.|.+||.........++-.    ..+...... .........
T Consensus       517 ------------l~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~  584 (893)
T KOG0291|consen  517 ------------LEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKT  584 (893)
T ss_pred             ------------EeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCc
Confidence                        345678999999999999999999999999999887776555311    111111111 111233467


Q ss_pred             eeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        190 VSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      ++.+++++||.++++|+..+.|.+|+++++-|
T Consensus       585 Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vl  616 (893)
T KOG0291|consen  585 FTTICYSADGKCILAGGESNSICIYDVPEGVL  616 (893)
T ss_pred             eEEEEEcCCCCEEEecCCcccEEEEECchhhe
Confidence            89999999999999999999999999998743

>KOG0276|consensus

Probab=100.00  E-value=9.5e-34  Score=208.33  Aligned_cols=188  Identities=18%  Similarity=0.324  Sum_probs=169.1

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC-ccceeeeccccceeEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP-NCLRSFVGHINDKNFV   81 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~~~~v~~~   81 (221)
                      +.+++|+.|..|+||+.+ +.+.+..|++|.+.|.+++.+| .-+++++|.|-+|++||.+.. .+.+.+.+|...|.++
T Consensus        68 nWiv~GsDD~~IrVfnyn-t~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv  146 (794)
T KOG0276|consen   68 NWIVTGSDDMQIRVFNYN-TGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQV  146 (794)
T ss_pred             ceEEEecCCceEEEEecc-cceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEE
Confidence            578999999999999998 8899999999999999999998 567899999999999999765 6778899999999999


Q ss_pred             EEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC--CEEEEecCCCeEEEEE
Q psy10662         82 GLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG--DYVACGSENNSLYIYY  158 (221)
Q Consensus        82 ~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~~d  158 (221)
                      +|+|.. +.+++++-|++|++|.+.+..+..+             +.+|...|+++.+-+.|  .+|++|++|..+++||
T Consensus       147 ~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfT-------------l~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWD  213 (794)
T KOG0276|consen  147 AFNPKDPNTFASASLDRTVKVWSLGSPHPNFT-------------LEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWD  213 (794)
T ss_pred             EecCCCccceeeeeccccEEEEEcCCCCCcee-------------eeccccCcceEEeccCCCcceEEecCCCceEEEee
Confidence            999965 5799999999999999988777665             48999999999997744  6999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .++..+++++               ++|...|+.++|+|.=.++++|+.||++++|+-.|-+
T Consensus       214 yQtk~CV~TL---------------eGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~  260 (794)
T KOG0276|consen  214 YQTKSCVQTL---------------EGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYK  260 (794)
T ss_pred             cchHHHHHHh---------------hcccccceEEEecCCCcEEEEecCCccEEEecCccee
Confidence            9888776555               4999999999999999999999999999999987643

>KOG0295|consensus

Probab=100.00  E-value=3.1e-33  Score=193.42  Aligned_cols=187  Identities=19%  Similarity=0.326  Sum_probs=171.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |-|.++++++.|.+|+.|++. ++.++.++.+|+..|..++.+.++ .+++++.|.++++|-+.+.++...+..|..+|.
T Consensus       203 P~gd~ilS~srD~tik~We~~-tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vE  281 (406)
T KOG0295|consen  203 PLGDHILSCSRDNTIKAWECD-TGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVE  281 (406)
T ss_pred             ecCCeeeecccccceeEEecc-cceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceE
Confidence            568899999999999999998 899999999999999999998654 578999999999999999999999999999999


Q ss_pred             EEEEeCC---------------CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662         80 FVGLATD---------------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY  144 (221)
Q Consensus        80 ~~~~~~~---------------~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  144 (221)
                      +++|.|.               +.++.+++.|++|++||+.++.++.++             .+|.+.|..++|+|.|+|
T Consensus       282 ci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL-------------~ghdnwVr~~af~p~Gky  348 (406)
T KOG0295|consen  282 CIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTL-------------VGHDNWVRGVAFSPGGKY  348 (406)
T ss_pred             EEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEE-------------ecccceeeeeEEcCCCeE
Confidence            9999873               358999999999999999999887764             899999999999999999


Q ss_pred             EEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        145 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       145 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      |+++.+|+++++||+++..++..+.               .|+..++++.|+.+..++++|+-|..+++|+.
T Consensus       349 i~ScaDDktlrvwdl~~~~cmk~~~---------------ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  349 ILSCADDKTLRVWDLKNLQCMKTLE---------------AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             EEEEecCCcEEEEEeccceeeeccC---------------CCcceeEEEecCCCCceEEeccccceeeeeec
Confidence            9999999999999999888776654               68888999999999999999999999999975

>KOG0282|consensus

Probab=100.00  E-value=8.6e-35  Score=207.52  Aligned_cols=205  Identities=20%  Similarity=0.285  Sum_probs=169.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      .+.+|++|+.|+.|+||++...+.+++++.+|..+|.+++|++ +..+++++.|+.+++||+++|+++..+. ....++|
T Consensus       226 ~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~c  304 (503)
T KOG0282|consen  226 KGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTC  304 (503)
T ss_pred             eeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEe-cCCCcee
Confidence            5678999999999999999977999999999999999999997 5569999999999999999999998885 4557899


Q ss_pred             EEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         81 VGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        81 ~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +.|+|++ +.+++|+.|+.|+.||+++++.++++             ..|-+.|..+.|-++|+.+++.++|+.+++|+.
T Consensus       305 vkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeY-------------d~hLg~i~~i~F~~~g~rFissSDdks~riWe~  371 (503)
T KOG0282|consen  305 VKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEY-------------DRHLGAILDITFVDEGRRFISSSDDKSVRIWEN  371 (503)
T ss_pred             eecCCCCCcEEEEecCCCcEEEEeccchHHHHHH-------------HhhhhheeeeEEccCCceEeeeccCccEEEEEc
Confidence            9999998 78999999999999999999877654             678889999999999999999999999999998


Q ss_pred             CCCCceeeeee-----------eccc--------------------ccccccccccccc--cceeEEEEcCCCcEEEEec
Q psy10662        160 GLSKHMHAYRF-----------DTVR--------------------SMLERDRNEDDTN--EFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       160 ~~~~~~~~~~~-----------~~~~--------------------~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~  206 (221)
                      +....+.....           .+..                    ..+.+...+.+|.  +.-..+.|||||++|++|+
T Consensus       372 ~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGd  451 (503)
T KOG0282|consen  372 RIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGD  451 (503)
T ss_pred             CCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeec
Confidence            76554432210           0100                    0111222344554  3345789999999999999


Q ss_pred             CCCeEEEEECCccc
Q psy10662        207 SQGIIKIYVIPIRV  220 (221)
Q Consensus       207 ~dg~i~iw~~~~~~  220 (221)
                      .||.+.+||.++-+
T Consensus       452 sdG~v~~wdwkt~k  465 (503)
T KOG0282|consen  452 SDGKVNFWDWKTTK  465 (503)
T ss_pred             CCccEEEeechhhh
Confidence            99999999998754

>KOG0291|consensus

Probab=100.00  E-value=5.1e-33  Score=208.16  Aligned_cols=201  Identities=17%  Similarity=0.295  Sum_probs=174.5

Q ss_pred             CCceEEEEeCC-CeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSAD-HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~d-g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      .|..||.|+.. |.+.||+.. ...-+...++|...+++++++|++ .+++|+.||.|+|||..++-+..++..|.+.|+
T Consensus       318 tGDWiA~g~~klgQLlVweWq-sEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt  396 (893)
T KOG0291|consen  318 TGDWIAFGCSKLGQLLVWEWQ-SESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVT  396 (893)
T ss_pred             cCCEEEEcCCccceEEEEEee-ccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceE
Confidence            37788887665 899999998 555556678899999999999865 588999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE-------------------------------eecccceeEeeEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-------------------------------FDTVRSMLESSFVG  128 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~  128 (221)
                      .+.|+..++.+++.+-||+|+.||+......+++.                               |...+++.+..+.+
T Consensus       397 ~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsG  476 (893)
T KOG0291|consen  397 AVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSG  476 (893)
T ss_pred             EEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcC
Confidence            99999999999999999999999998877776665                               66778888888999


Q ss_pred             eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC-ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK-HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       129 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      |.++|.+++|+|.+..|++++.|.+|++||+-... ....+                .+...+.+++|+|+|+-|++++.
T Consensus       477 HEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl----------------~i~sdvl~vsfrPdG~elaVaTl  540 (893)
T KOG0291|consen  477 HEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETL----------------EIRSDVLAVSFRPDGKELAVATL  540 (893)
T ss_pred             CCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeE----------------eeccceeEEEEcCCCCeEEEEEe
Confidence            99999999999999999999999999999975432 11122                24557899999999999999999


Q ss_pred             CCeEEEEECCcc
Q psy10662        208 QGIIKIYVIPIR  219 (221)
Q Consensus       208 dg~i~iw~~~~~  219 (221)
                      ||.|.+||...+
T Consensus       541 dgqItf~d~~~~  552 (893)
T KOG0291|consen  541 DGQITFFDIKEA  552 (893)
T ss_pred             cceEEEEEhhhc
Confidence            999999998754

>KOG0265|consensus

Probab=100.00  E-value=3e-33  Score=189.07  Aligned_cols=189  Identities=16%  Similarity=0.300  Sum_probs=168.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |+|.+||+|+.|..|.+|++....+-...+++|+++|..+.|.+ ++.+++++.|.+++.||+++++.++.+++|.+-|+
T Consensus        57 P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vN  136 (338)
T KOG0265|consen   57 PDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVN  136 (338)
T ss_pred             CCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceee
Confidence            78999999999999999998755666778889999999999995 66799999999999999999999999999999999


Q ss_pred             EEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         80 FVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ++.-..-|. ++.+++.|+++++||+++...++++              ....+++++.|..++..+.+|+-|+.|++||
T Consensus       137 s~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~--------------~~kyqltAv~f~d~s~qv~sggIdn~ikvWd  202 (338)
T KOG0265|consen  137 SLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF--------------ENKYQLTAVGFKDTSDQVISGGIDNDIKVWD  202 (338)
T ss_pred             ecCccccCCeEEEecCCCceEEEEeecccchhhcc--------------ccceeEEEEEecccccceeeccccCceeeec
Confidence            988544443 6788999999999999988887664              3356789999999999999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++....++.+.               +|..+|+.+..+|+|.++.+-+.|.++++||++.
T Consensus       203 ~r~~d~~~~ls---------------Gh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp  247 (338)
T KOG0265|consen  203 LRKNDGLYTLS---------------GHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP  247 (338)
T ss_pred             cccCcceEEee---------------cccCceeeEEeccCCCccccccccceEEEEEecc
Confidence            99888777664               8999999999999999999999999999999974

>KOG0277|consensus

Probab=100.00  E-value=1.2e-33  Score=187.13  Aligned_cols=189  Identities=17%  Similarity=0.238  Sum_probs=163.6

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      .+.+++++.||.+++||+.....+++.++.|+..|.++.|++  ...+++++-|++|++|+...++.++++.+|...|..
T Consensus        73 e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~  152 (311)
T KOG0277|consen   73 ENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQ  152 (311)
T ss_pred             cceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEE
Confidence            467899999999999998867789999999999999999995  455888899999999999999999999999999999


Q ss_pred             EEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEE
Q psy10662         81 VGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYY  158 (221)
Q Consensus        81 ~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d  158 (221)
                      .+|+|. .+++++++.|+.+++||++.......             ++.|..++.++.|+. +.+.++||+.|+.|+.||
T Consensus       153 a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-------------i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wD  219 (311)
T KOG0277|consen  153 AAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-------------IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWD  219 (311)
T ss_pred             EecCCCCCCeEEEccCCceEEEEEecCCCceeE-------------EEeccceeEeecccccCCcEEEecCCCceEEEEe
Confidence            999995 46899999999999999886533222             478889999999986 677899999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCC-CcEEEEecCCCeEEEEECCc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++.-+.              ++..+.+|.-.|+.++|||. ..+|++++.|-++++||...
T Consensus       220 ir~~r~--------------pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~  266 (311)
T KOG0277|consen  220 IRNLRT--------------PLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPER  266 (311)
T ss_pred             hhhccc--------------cceeecCCceEEEEEecCcchhhHhhhccccceEEeccccc
Confidence            975442              23344589999999999995 57899999999999999874

>KOG0645|consensus

Probab=100.00  E-value=2.6e-32  Score=182.25  Aligned_cols=192  Identities=20%  Similarity=0.324  Sum_probs=161.6

Q ss_pred             CceEEEEeCCCeEEEEEecCC--ceeeEEE-EeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC--ccceeeecccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNT--KEALAVF-KGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP--NCLRSFVGHIN   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~--~~~~~~~-~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~--~~~~~~~~~~~   76 (221)
                      |..||+|+.|..|++|+....  -.+...+ .+|+..|.+++|+| +++|++++.|.++.||.-..+  +++..+.+|..
T Consensus        27 g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEn  106 (312)
T KOG0645|consen   27 GVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHEN  106 (312)
T ss_pred             ceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeecccc
Confidence            568999999999999998731  1222223 46999999999998 567999999999999987644  67888999999


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      .|.|++|+++|.+||+++.|..|-||.+......          .+...+++|...|..+.|+|...+|++++.|.+|++
T Consensus       107 EVK~Vaws~sG~~LATCSRDKSVWiWe~deddEf----------ec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~  176 (312)
T KOG0645|consen  107 EVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEF----------ECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKV  176 (312)
T ss_pred             ceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcE----------EEEeeeccccccccEEEEcCCcceeEEeccCCeEEE
Confidence            9999999999999999999999999988754433          234567899999999999999999999999999999


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      |+-..            .....+.+.+.+|...|.+++|++.|..|++++.|++++||..
T Consensus       177 ~~~~~------------dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~  224 (312)
T KOG0645|consen  177 YRDED------------DDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRL  224 (312)
T ss_pred             EeecC------------CCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeee
Confidence            97542            2334445566789999999999999999999999999999984

>KOG0281|consensus

Probab=100.00  E-value=1.1e-34  Score=200.20  Aligned_cols=195  Identities=17%  Similarity=0.342  Sum_probs=156.3

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      |...+++|..|++|+|||.. ...+++.+.+|.+.|.|+.|.. ..+++|+.|.+|++||+++++++..+-.|...|..+
T Consensus       206 DD~kiVSGlrDnTikiWD~n-~~~c~~~L~GHtGSVLCLqyd~-rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhl  283 (499)
T KOG0281|consen  206 DDEKIVSGLRDNTIKIWDKN-SLECLKILTGHTGSVLCLQYDE-RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHL  283 (499)
T ss_pred             cchhhhcccccCceEEeccc-cHHHHHhhhcCCCcEEeeeccc-eEEEecCCCceEEEEeccCCchhhHHhhhcceeEEE
Confidence            45678999999999999997 7889999999999999999974 479999999999999999999999999999999999


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEE-------------E-----------------EeecccceeEeeEEEeeC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHA-------------Y-----------------RFDTVRSMLESSFVGHIN  131 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-------------~-----------------~~~~~~~~~~~~~~~~~~  131 (221)
                      .|+  ..++++++.|.++.+||+.+...+..             .                 .|+..+...++.+.+|..
T Consensus       284 rf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkR  361 (499)
T KOG0281|consen  284 RFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR  361 (499)
T ss_pred             EEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccc
Confidence            997  45888888999999998765532110             0                 044445555556667776


Q ss_pred             ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662        132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  211 (221)
                      .|.|+.+  .++++++|+.|.+|++||+..+.++..+               ++|+.-|.++.|  |.+.+++|+.||+|
T Consensus       362 GIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvL---------------eGHEeLvRciRF--d~krIVSGaYDGki  422 (499)
T KOG0281|consen  362 GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL---------------EGHEELVRCIRF--DNKRIVSGAYDGKI  422 (499)
T ss_pred             cceehhc--cCeEEEecCCCceEEEEeccccHHHHHH---------------hchHHhhhheee--cCceeeeccccceE
Confidence            6666654  3567777777777777777777665444               489999999999  56789999999999


Q ss_pred             EEEECCcc
Q psy10662        212 KIYVIPIR  219 (221)
Q Consensus       212 ~iw~~~~~  219 (221)
                      ++||+.++
T Consensus       423 kvWdl~aa  430 (499)
T KOG0281|consen  423 KVWDLQAA  430 (499)
T ss_pred             EEEecccc
Confidence            99999865

>KOG0316|consensus

Probab=100.00  E-value=1.2e-32  Score=180.78  Aligned_cols=189  Identities=15%  Similarity=0.214  Sum_probs=165.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      ||++.++++.|.+|++|+.. .+.+++++.+|...|..++.+ ++..+++|+.|..+.+||+.+++.++.+.+|.+.|+.
T Consensus        28 dGnY~ltcGsdrtvrLWNp~-rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNt  106 (307)
T KOG0316|consen   28 DGNYCLTCGSDRTVRLWNPL-RGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNT  106 (307)
T ss_pred             CCCEEEEcCCCceEEeeccc-ccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeE
Confidence            78999999999999999998 789999999999999999987 4677999999999999999999999999999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      ++|+.+...+++|+.|..+++||.++...           .+++.+......|.++...  +..|++|+.||+++.||++
T Consensus       107 V~fNeesSVv~SgsfD~s~r~wDCRS~s~-----------ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR  173 (307)
T KOG0316|consen  107 VRFNEESSVVASGSFDSSVRLWDCRSRSF-----------EPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIR  173 (307)
T ss_pred             EEecCcceEEEeccccceeEEEEcccCCC-----------CccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEee
Confidence            99999999999999999999999875432           2233345666778888765  5689999999999999999


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      .+....-+                 ...+|++++|+++++.+.+++.|+++++.|-.+|+|
T Consensus       174 ~G~l~sDy-----------------~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGkl  217 (307)
T KOG0316|consen  174 KGTLSSDY-----------------FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKL  217 (307)
T ss_pred             cceeehhh-----------------cCCcceeEEecCCCCEEEEeeccceeeecccchhHH
Confidence            88654322                 345899999999999999999999999999999875

>KOG0318|consensus

Probab=100.00  E-value=1.4e-31  Score=193.16  Aligned_cols=203  Identities=15%  Similarity=0.287  Sum_probs=165.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEE---eccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCcccee------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK---GHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRS------   70 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~---~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~------   70 (221)
                      |||.++|+++.||.|.+||=. +++.+..+.   +|++.|.+++|+|+ .++++++.|.+++|||+.+.+++++      
T Consensus       200 PDG~~Fat~gsDgki~iyDGk-tge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~  278 (603)
T KOG0318|consen  200 PDGSRFATAGSDGKIYIYDGK-TGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGST  278 (603)
T ss_pred             CCCCeEEEecCCccEEEEcCC-CccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCc
Confidence            899999999999999999987 788888887   89999999999985 5699999999999999976544332      


Q ss_pred             -------------------------------------eeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEE-
Q psy10662         71 -------------------------------------FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA-  112 (221)
Q Consensus        71 -------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-  112 (221)
                                                           +.+|...|+++..+|++++|++|+.||.|.-||..++..-+. 
T Consensus       279 v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~  358 (603)
T KOG0318|consen  279 VEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLA  358 (603)
T ss_pred             hhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccc
Confidence                                                 338999999999999999999999999999999876643211 


Q ss_pred             ----------EE-----------e--------------------------------------------------------
Q psy10662        113 ----------YR-----------F--------------------------------------------------------  115 (221)
Q Consensus       113 ----------~~-----------~--------------------------------------------------------  115 (221)
                                +.           |                                                        
T Consensus       359 g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~  438 (603)
T KOG0318|consen  359 GKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVS  438 (603)
T ss_pred             cccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcce
Confidence                      11           0                                                        


Q ss_pred             --------------------------------ecc--cceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662        116 --------------------------------DTV--RSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus       116 --------------------------------~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                                                      ...  ..........|..++++++++||+.+||+|...+.+.+||+.+
T Consensus       439 ~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s  518 (603)
T KOG0318|consen  439 SIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVAS  518 (603)
T ss_pred             eeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEccc
Confidence                                            000  0011123456888999999999999999999999999999987


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+.. .-             ...-|...|++++|+|+..++|+|+.|-.|.+|++..
T Consensus       519 ~~~~-~~-------------~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~k  561 (603)
T KOG0318|consen  519 REVK-TN-------------RWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKK  561 (603)
T ss_pred             Ccee-cc-------------eeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccC
Confidence            6541 11             1123888999999999999999999999999999974

>KOG0318|consensus

Probab=100.00  E-value=1.2e-31  Score=193.49  Aligned_cols=210  Identities=13%  Similarity=0.142  Sum_probs=160.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCcee-eEEEEeccCceEEEEEecC-CcEEEecCC----CcEEEEEc------------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEA-LAVFKGHRKAVSYVKFLNK-EDIVSASTD----SQLKLWNI------------   62 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~i~~~~~~~~-~~l~s~~~d----~~v~~wd~------------   62 (221)
                      |.|.++|+|...|.|||||..+.... ..+++.-.++|..|+|+.+ .++++.++.    |.+.+||-            
T Consensus        69 PsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr  148 (603)
T KOG0318|consen   69 PSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSR  148 (603)
T ss_pred             CCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCCccceeeccce
Confidence            78999999999999999998742222 2244555556666666543 334433321    23444543            


Q ss_pred             -----------------------------CCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEE
Q psy10662         63 -----------------------------NKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        63 -----------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  113 (221)
                                                   ..-+...++..|..-|+|+.|+|||.++++++.||++.+||-.+++.+..+
T Consensus       149 ~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l  228 (603)
T KOG0318|consen  149 RINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGEL  228 (603)
T ss_pred             eEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEe
Confidence                                         222233344578889999999999999999999999999999999998876


Q ss_pred             EeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc--------------------
Q psy10662        114 RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV--------------------  173 (221)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--------------------  173 (221)
                      .          .-.+|.+.|.+++|+||++.+++++.|.++++||+.+.+.+.++.+...                    
T Consensus       229 ~----------~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl  298 (603)
T KOG0318|consen  229 E----------DSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSL  298 (603)
T ss_pred             c----------CCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEc
Confidence            2          1358999999999999999999999999999999999888877754332                    


Q ss_pred             --------cccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        174 --------RSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       174 --------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                              ......+..+.+|...|+++..+|++++|++|+.||.|.-|+..++.
T Consensus       299 ~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~  353 (603)
T KOG0318|consen  299 SGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGT  353 (603)
T ss_pred             CcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcc
Confidence                    11112445567999999999999999999999999999999998764

>KOG0275|consensus

Probab=100.00  E-value=1.2e-33  Score=193.79  Aligned_cols=207  Identities=16%  Similarity=0.228  Sum_probs=172.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeE--------EEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALA--------VFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~--------~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      |||++|++|+.||.|.+|+.. +++..+        .+--+.++|.|+.|+. ...+++|+.||.|++|.++++.+++.+
T Consensus       223 PDgqyLvsgSvDGFiEVWny~-~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrF  301 (508)
T KOG0275|consen  223 PDGQYLVSGSVDGFIEVWNYT-TGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRF  301 (508)
T ss_pred             CCCceEeeccccceeeeehhc-cchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHh
Confidence            899999999999999999997 554332        2344778999999995 567999999999999999999999998


Q ss_pred             e-ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         72 V-GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        72 ~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      . .|...|+|+.|+.|+..+++++.|.++++.-+.+++.++++             .+|.+.|+...|.++|..+++++.
T Consensus       302 drAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEf-------------rGHsSyvn~a~ft~dG~~iisaSs  368 (508)
T KOG0275|consen  302 DRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEF-------------RGHSSYVNEATFTDDGHHIISASS  368 (508)
T ss_pred             hhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHh-------------cCccccccceEEcCCCCeEEEecC
Confidence            5 89999999999999999999999999999999999888764             899999999999999999999999


Q ss_pred             CCeEEEEEcCCCCceeeeeeeccccc--------------------------------ccccccccccccceeEEEEcCC
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSM--------------------------------LERDRNEDDTNEFVSAVCWRQL  198 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~v~~~~~~~~  198 (221)
                      ||+|++|+..+.+++.+++.......                                ......-....+...+++.+|.
T Consensus       369 DgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpk  448 (508)
T KOG0275|consen  369 DGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPK  448 (508)
T ss_pred             CccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCC
Confidence            99999999999888877652221100                                0000000112334557788999


Q ss_pred             CcEEEEecCCCeEEEEECCcccC
Q psy10662        199 SRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       199 ~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      |.++++.+.|+.++.+.+.+|+|
T Consensus       449 GewiYcigED~vlYCF~~~sG~L  471 (508)
T KOG0275|consen  449 GEWIYCIGEDGVLYCFSVLSGKL  471 (508)
T ss_pred             CcEEEEEccCcEEEEEEeecCce
Confidence            99999999999999999998875

>KOG0645|consensus

Probab=100.00  E-value=3.6e-31  Score=176.79  Aligned_cols=207  Identities=18%  Similarity=0.262  Sum_probs=166.2

Q ss_pred             CCCceEEEEeCCCeEEEEEec-CCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC---ccceeeeccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLR-NTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP---NCLRSFVGHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~---~~~~~~~~~~   75 (221)
                      |.|++||+|+.|.++.||.-. ...+++.++++|...|.|++|++ +++|++|+.|..|-+|.+...   +++..+.+|.
T Consensus        71 p~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Ht  150 (312)
T KOG0645|consen   71 PHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHT  150 (312)
T ss_pred             CCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccc
Confidence            789999999999999999865 23478899999999999999995 677999999999999999754   4566778999


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      ..|..+.|+|...+|++++.|++|++|+-..          .....+..++.+|.+.|.+++|+|.|..|+++++|++++
T Consensus       151 qDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~----------dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~  220 (312)
T KOG0645|consen  151 QDVKHVIWHPTEDLLFSCSYDNTIKVYRDED----------DDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVS  220 (312)
T ss_pred             ccccEEEEcCCcceeEEeccCCeEEEEeecC----------CCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceE
Confidence            9999999999999999999999999997541          223345567799999999999999999999999999999


Q ss_pred             EEEcCCC------Cceeeeeeec---------------------ccccccc-cccccccccceeEEEEcCC-CcEEEEec
Q psy10662        156 IYYKGLS------KHMHAYRFDT---------------------VRSMLER-DRNEDDTNEFVSAVCWRQL-SRVLVAAN  206 (221)
Q Consensus       156 ~~d~~~~------~~~~~~~~~~---------------------~~~~~~~-~~~~~~~~~~v~~~~~~~~-~~~l~~~~  206 (221)
                      ||.+.+.      ..++.+.+..                     ....+.. ......|...|+++.|+|. .+.|++++
T Consensus       221 Iw~~~~~~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~  300 (312)
T KOG0645|consen  221 IWRLYTDLSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGG  300 (312)
T ss_pred             eeeeccCcchhcccceEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecC
Confidence            9984321      2223232220                     0011111 1123468889999999994 78899999


Q ss_pred             CCCeEEEEECC
Q psy10662        207 SQGIIKIYVIP  217 (221)
Q Consensus       207 ~dg~i~iw~~~  217 (221)
                      .||.|++|.+.
T Consensus       301 DDG~v~~W~l~  311 (312)
T KOG0645|consen  301 DDGIVNFWELE  311 (312)
T ss_pred             CCceEEEEEec
Confidence            99999999975

>KOG0273|consensus

Probab=100.00  E-value=8.7e-32  Score=191.84  Aligned_cols=186  Identities=20%  Similarity=0.370  Sum_probs=169.0

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      +..-+++++.|+.|+|+.+. ...++.++.+|.++|.+|.|+| +..|++++.|+++++|.+........+..|...|..
T Consensus       328 ~~~~F~ts~td~~i~V~kv~-~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t  406 (524)
T KOG0273|consen  328 SNDEFATSSTDGCIHVCKVG-EDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYT  406 (524)
T ss_pred             cCceEeecCCCceEEEEEec-CCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceee
Confidence            34578999999999999998 7888999999999999999998 556889999999999999999999999999999999


Q ss_pred             EEEeCCC---------CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         81 VGLATDG---------DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        81 ~~~~~~~---------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      +.|+|.|         ..+++++.|++|++||+..+.++..+             ..|..+|++++|+|+|+++|+|+.|
T Consensus       407 ~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f-------------~kH~~pVysvafS~~g~ylAsGs~d  473 (524)
T KOG0273|consen  407 IKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTL-------------MKHQEPVYSVAFSPNGRYLASGSLD  473 (524)
T ss_pred             EeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEee-------------ccCCCceEEEEecCCCcEEEecCCC
Confidence            9999964         36899999999999999999888764             7899999999999999999999999


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      |.|.+|+.++++..+.+.                ....|..++|+.+|.+|..+-.|+.+.+.|++
T Consensus       474 g~V~iws~~~~~l~~s~~----------------~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  474 GCVHIWSTKTGKLVKSYQ----------------GTGGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             CeeEeccccchheeEeec----------------CCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            999999999998877764                35569999999999999999999999999875

>KOG0285|consensus

Probab=100.00  E-value=7e-33  Score=191.71  Aligned_cols=168  Identities=15%  Similarity=0.270  Sum_probs=155.5

Q ss_pred             eeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEE
Q psy10662         25 EALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  103 (221)
Q Consensus        25 ~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd  103 (221)
                      +..+.+++|.+.|.|+++.|. ..|++|+.|++++|||+.+++...++.+|...|..+++++...|+++++.|+.|+.||
T Consensus       142 Kl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwD  221 (460)
T KOG0285|consen  142 KLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWD  221 (460)
T ss_pred             eehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEe
Confidence            455678899999999999995 5599999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662        104 KGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE  183 (221)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
                      ++..+.++.+             .+|-+.|.+++.+|.-..|++|+.|..+++||+++...+..+.              
T Consensus       222 Le~nkvIR~Y-------------hGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~--------------  274 (460)
T KOG0285|consen  222 LEYNKVIRHY-------------HGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLS--------------  274 (460)
T ss_pred             chhhhhHHHh-------------ccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEec--------------
Confidence            9988877654             8999999999999999999999999999999999988877764              


Q ss_pred             cccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        184 DDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       184 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                       +|..+|.++.+.|-...+++||.|++|++||+..|+
T Consensus       275 -GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agk  310 (460)
T KOG0285|consen  275 -GHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGK  310 (460)
T ss_pred             -CCCCcceeEEeecCCCceEEecCCceEEEeeeccCc
Confidence             899999999999988899999999999999998765

>KOG1407|consensus

Probab=100.00  E-value=3.3e-32  Score=181.00  Aligned_cols=202  Identities=19%  Similarity=0.290  Sum_probs=167.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeE--EEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALA--VFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      +|..|++|+.|+++.+|+++ ..+...  ...+|.+.|-.++|+|  ...+++++.|.+|++||++.+++...+... ..
T Consensus        31 ~g~~lasgs~dktv~v~n~e-~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~-~e  108 (313)
T KOG1407|consen   31 DGTKLASGSFDKTVSVWNLE-RDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETK-GE  108 (313)
T ss_pred             cCceeeecccCCceEEEEec-chhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeecc-Cc
Confidence            78999999999999999998 443333  3567999999999996  567999999999999999999999887543 33


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEee----------------------------cccceeEeeEEEe
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD----------------------------TVRSMLESSFVGH  129 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~  129 (221)
                      -..+.|+|+|++++.+..|..|...|.++.+.+...++.                            ...-+++..+..|
T Consensus       109 ni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH  188 (313)
T KOG1407|consen  109 NINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAH  188 (313)
T ss_pred             ceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccC
Confidence            456889999999999999999999999888776654421                            1122344667789


Q ss_pred             eCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC
Q psy10662        130 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG  209 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  209 (221)
                      .....|+.|+|+|+++|+|+.|..+.+||++..-++..+.               .++-+|+.+.|+.||++||+||+|.
T Consensus       189 ~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~is---------------RldwpVRTlSFS~dg~~lASaSEDh  253 (313)
T KOG1407|consen  189 PSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCIS---------------RLDWPVRTLSFSHDGRMLASASEDH  253 (313)
T ss_pred             CcceEEEEECCCCceEeeccccceeeccChhHhhhheeec---------------cccCceEEEEeccCcceeeccCccc
Confidence            9889999999999999999999999999987666555543               6778999999999999999999999


Q ss_pred             eEEEEECCccc
Q psy10662        210 IIKIYVIPIRV  220 (221)
Q Consensus       210 ~i~iw~~~~~~  220 (221)
                      .|-|=++++|.
T Consensus       254 ~IDIA~vetGd  264 (313)
T KOG1407|consen  254 FIDIAEVETGD  264 (313)
T ss_pred             eEEeEecccCC
Confidence            99988888763

>KOG0319|consensus

Probab=100.00  E-value=3.6e-32  Score=202.99  Aligned_cols=191  Identities=23%  Similarity=0.313  Sum_probs=165.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc---eeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCcc-----ce--
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK---EALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNC-----LR--   69 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~-----~~--   69 (221)
                      +|.+|++|+.|.++++|.+++..   .++....+|...|.+++++.  ...|+++|.|+++++|++...+.     +.  
T Consensus       376 ~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~  455 (775)
T KOG0319|consen  376 SGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTC  455 (775)
T ss_pred             cCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehh
Confidence            45699999999999999885322   34566788999999999984  35699999999999999976221     11  


Q ss_pred             --eeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         70 --SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        70 --~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                        ....|...|++++++|+.+++||||.|.+.+||++.......             .+.+|...+.++.|+|..+.+++
T Consensus       456 ~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~-------------vLsGH~RGvw~V~Fs~~dq~laT  522 (775)
T KOG0319|consen  456 RYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLG-------------VLSGHTRGVWCVSFSKNDQLLAT  522 (775)
T ss_pred             hHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEE-------------EeeCCccceEEEEeccccceeEe
Confidence              224689999999999999999999999999999988655554             46899999999999999999999


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++.|++|+||.+.+..++.++.               +|...|..+.|-.+|..|++++.||.|++|+++++.
T Consensus       523 ~SgD~TvKIW~is~fSClkT~e---------------GH~~aVlra~F~~~~~qliS~~adGliKlWnikt~e  580 (775)
T KOG0319|consen  523 CSGDKTVKIWSISTFSCLKTFE---------------GHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNE  580 (775)
T ss_pred             ccCCceEEEEEeccceeeeeec---------------CccceeEeeeeeeCCcEEEeccCCCcEEEEeccchh
Confidence            9999999999999998887775               899999999999999999999999999999999864

>KOG0319|consensus

Probab=100.00  E-value=2.4e-32  Score=203.93  Aligned_cols=187  Identities=16%  Similarity=0.243  Sum_probs=167.5

Q ss_pred             ceEEEEeCCCeEEEEEecCCc--e--eeE----EEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662          4 CHLAFGSADHCVHYYDLRNTK--E--ALA----VFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~--~--~~~----~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~   74 (221)
                      ..|++++.|.++++|++....  .  ...    +...|...|++++++| +..++|||.|.+.++|+++..+....+.+|
T Consensus       425 sffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH  504 (775)
T KOG0319|consen  425 SFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGH  504 (775)
T ss_pred             cEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCC
Confidence            579999999999999997411  1  111    2356999999999998 556889999999999999999999999999


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      ...|.++.|+|..+.++++|.|++|+||.+.+..+++++             .+|...|..+.|-.+++.|++++.||.|
T Consensus       505 ~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~-------------eGH~~aVlra~F~~~~~qliS~~adGli  571 (775)
T KOG0319|consen  505 TRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTF-------------EGHTSAVLRASFIRNGKQLISAGADGLI  571 (775)
T ss_pred             ccceEEEEeccccceeEeccCCceEEEEEeccceeeeee-------------cCccceeEeeeeeeCCcEEEeccCCCcE
Confidence            999999999999999999999999999999998888775             8999999999999999999999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++|++.+..++..++               .|+..|.+++-+|.+.++++|+.||.|.+|.=.|
T Consensus       572 KlWnikt~eC~~tlD---------------~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~T  620 (775)
T KOG0319|consen  572 KLWNIKTNECEMTLD---------------AHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVT  620 (775)
T ss_pred             EEEeccchhhhhhhh---------------hccceeEEEeecCccceeEecCCCeEEEEeecCc
Confidence            999999998877665               8999999999999999999999999999996443

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.2e-30  Score=210.27  Aligned_cols=211  Identities=31%  Similarity=0.513  Sum_probs=168.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ++.+|++++.||.|++||+. +++.+..+.+|.+.|++++|+|  +..|++|+.|+.|++||++++..+..+.. ...+.
T Consensus       544 ~~~~las~~~Dg~v~lWd~~-~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~-~~~v~  621 (793)
T PLN00181        544 IKSQVASSNFEGVVQVWDVA-RSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANIC  621 (793)
T ss_pred             CCCEEEEEeCCCeEEEEECC-CCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec-CCCeE
Confidence            46789999999999999998 6778888999999999999996  35689999999999999999888877764 46789


Q ss_pred             EEEEe-CCCCEEEEecCCCeEEEEECCCCe-eeEEE----------E------------------eeccc------ceeE
Q psy10662         80 FVGLA-TDGDYVACGSENNSLYIYYKGLSK-HMHAY----------R------------------FDTVR------SMLE  123 (221)
Q Consensus        80 ~~~~~-~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~----------~------------------~~~~~------~~~~  123 (221)
                      ++.|+ +++.++++|+.||.|++||++..+ ++..+          .                  |+...      ...+
T Consensus       622 ~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l  701 (793)
T PLN00181        622 CVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPL  701 (793)
T ss_pred             EEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcce
Confidence            99995 568899999999999999997654 22211          1                  33321      2345


Q ss_pred             eeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE
Q psy10662        124 SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV  203 (221)
Q Consensus       124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  203 (221)
                      ..+.+|...+.+++|+|++++|++|+.|+.|++|+.........+.+........  .....+...|.+++|+|++.+|+
T Consensus       702 ~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~--~~~~~~~~~V~~v~ws~~~~~lv  779 (793)
T PLN00181        702 HSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSG--LEVDDASQFISSVCWRGQSSTLV  779 (793)
T ss_pred             EEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccc--cccCCCCcEEEEEEEcCCCCeEE
Confidence            5677888889999999999999999999999999988776655554433221111  11234667899999999999999


Q ss_pred             EecCCCeEEEEEC
Q psy10662        204 AANSQGIIKIYVI  216 (221)
Q Consensus       204 ~~~~dg~i~iw~~  216 (221)
                      +|+.||.|++|++
T Consensus       780 a~~~dG~I~i~~~  792 (793)
T PLN00181        780 AANSTGNIKILEM  792 (793)
T ss_pred             EecCCCcEEEEec
Confidence            9999999999996

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=2.3e-30  Score=196.99  Aligned_cols=191  Identities=15%  Similarity=0.224  Sum_probs=147.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCc-------eeeEEEEeccCceEEEEEecCC-c-EEEecCCCcEEEEEcCCCccceeeec
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTK-------EALAVFKGHRKAVSYVKFLNKE-D-IVSASTDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~-l~s~~~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      +++||+|+.||.|+|||+....       .++..+.+|...|.+++|+|.+ . +++++.|++|++||+++++.+..+. 
T Consensus        87 ~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-  165 (568)
T PTZ00420         87 SEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-  165 (568)
T ss_pred             CCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-
Confidence            6899999999999999997322       2345678899999999999854 3 5789999999999999988777665 


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceE-----EEEEecCCCEEEEe
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKN-----FVGLATDGDYVACG  148 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~  148 (221)
                      |...|.+++|+|+|.+|++++.|+.|++||+++++.+.++             .+|.+.+.     ...|++++.+|+++
T Consensus       166 ~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl-------------~gH~g~~~s~~v~~~~fs~d~~~IlTt  232 (568)
T PTZ00420        166 MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSF-------------HIHDGGKNTKNIWIDGLGGDDNYILST  232 (568)
T ss_pred             cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEE-------------ecccCCceeEEEEeeeEcCCCCEEEEE
Confidence            6678999999999999999999999999999998876654             56655433     23456888999988


Q ss_pred             cCCC----eEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        149 SENN----SLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       149 ~~d~----~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.++    .|++||++. .+.+..+..+             .+...+......++|.++++|+.|+.|++|++..+.
T Consensus       233 G~d~~~~R~VkLWDlr~~~~pl~~~~ld-------------~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~  296 (568)
T PTZ00420        233 GFSKNNMREMKLWDLKNTTSALVTMSID-------------NASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS  296 (568)
T ss_pred             EcCCCCccEEEEEECCCCCCceEEEEec-------------CCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc
Confidence            8764    799999985 4444333211             222333333334568899999999999999997653

>KOG0643|consensus

Probab=100.00  E-value=3e-31  Score=177.00  Aligned_cols=204  Identities=16%  Similarity=0.186  Sum_probs=169.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeee--------
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFV--------   72 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~--------   72 (221)
                      +|.+|.+++.|....+|-.. +++.+.++.+|.+.|+|+.... ...+++|+.|.++++||+++++.+..++        
T Consensus        21 eGDLlFscaKD~~~~vw~s~-nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~   99 (327)
T KOG0643|consen   21 EGDLLFSCAKDSTPTVWYSL-NGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRV   99 (327)
T ss_pred             CCcEEEEecCCCCceEEEec-CCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEE
Confidence            68999999999999999886 6899999999999999999984 6779999999999999999887654432        


Q ss_pred             ---------------------------------------------ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCC
Q psy10662         73 ---------------------------------------------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS  107 (221)
Q Consensus        73 ---------------------------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~  107 (221)
                                                                   .+.+.++.+-|.|-+++|++|.+||.|.+||++++
T Consensus       100 ~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g  179 (327)
T KOG0643|consen  100 DFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTG  179 (327)
T ss_pred             eeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccC
Confidence                                                         23455677788888899999999999999999887


Q ss_pred             eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccc------------
Q psy10662        108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS------------  175 (221)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~------------  175 (221)
                      +....            .-..|...|+.+.++|+..++++++.|.+-++||..+.+.+..+..+..-.            
T Consensus       180 ~~~v~------------s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~Vi  247 (327)
T KOG0643|consen  180 KELVD------------SDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVI  247 (327)
T ss_pred             ceeee------------chhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEE
Confidence            65432            346788899999999999999999999999999999888777765321000            


Q ss_pred             ----------------------------cccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        176 ----------------------------MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       176 ----------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                                                  ..+.+....+|-++|++++|+|+|+..++|+.||.|++..+..
T Consensus       248 lgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  248 LGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS  318 (327)
T ss_pred             ecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence                                        1123445678999999999999999999999999999987654

>KOG0292|consensus

Probab=100.00  E-value=1e-31  Score=204.58  Aligned_cols=206  Identities=16%  Similarity=0.276  Sum_probs=175.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++.++++|+.|..|+||+.. ..+++.++.+|-+.|..+.|++. -.++++|.|.+|+||+..+.+++..+.+|...|.
T Consensus        61 ~~qplFVSGGDDykIkVWnYk-~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVM  139 (1202)
T KOG0292|consen   61 PTQPLFVSGGDDYKIKVWNYK-TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVM  139 (1202)
T ss_pred             CCCCeEEecCCccEEEEEecc-cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEE
Confidence            567899999999999999998 88999999999999999999974 4699999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEE----EE------------eecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHA----YR------------FDTVRSMLESSFVGHINDKNFVGLATDGD  143 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~----~~------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  143 (221)
                      |..|+|..++++++|-|.+|++||+..-+....    +.            +..........+.+|...|+.++|+|.-.
T Consensus       140 cAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp  219 (1202)
T KOG0292|consen  140 CAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP  219 (1202)
T ss_pred             eeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc
Confidence            999999999999999999999999853222110    00            01112234456789999999999999999


Q ss_pred             EEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        144 YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       144 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +|++|++|+.|++|.+...+.-             ......+|...|.++-|+|...++++.|.|+.|++||+..++
T Consensus       220 liVSG~DDRqVKlWrmnetKaW-------------EvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt  283 (1202)
T KOG0292|consen  220 LIVSGADDRQVKLWRMNETKAW-------------EVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRT  283 (1202)
T ss_pred             eEEecCCcceeeEEEeccccce-------------eehhhhcccCCcceEEecCccceeEecCCCccEEEEeccccc
Confidence            9999999999999987644321             123456899999999999999999999999999999998764

>KOG0278|consensus

Probab=100.00  E-value=2.9e-32  Score=180.51  Aligned_cols=189  Identities=15%  Similarity=0.255  Sum_probs=165.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      |.++|++|+.+..++|||++....+...+.+|.+.|..+.|.. ++.+++.+.|++|++||.+++..++++. .+.+|++
T Consensus       111 ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtS  189 (334)
T KOG0278|consen  111 DSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTS  189 (334)
T ss_pred             cchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcc
Confidence            6788999999999999999977778889999999999999984 6778899999999999999999999886 5778999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      +.++++|.++.++ ..+.|.+||..+...++.+              .-...|.+..++|+...+++|++|..++.||..
T Consensus       190 lEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~--------------k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~  254 (334)
T KOG0278|consen  190 LEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSY--------------KMPCNVESASLHPKKEFFVAGGEDFKVYKFDYN  254 (334)
T ss_pred             eeeccCCCEEEEe-cCceeEEeccccccceeec--------------cCccccccccccCCCceEEecCcceEEEEEecc
Confidence            9999999876655 4567999999988877664              234568889999999999999999999999999


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++..+..+.              .+|.++|.++.|+|+|...++||.||+|++|....++
T Consensus       255 TgeEi~~~n--------------kgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~  300 (334)
T KOG0278|consen  255 TGEEIGSYN--------------KGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK  300 (334)
T ss_pred             CCceeeecc--------------cCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence            998765541              4799999999999999999999999999999987653

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=4.1e-30  Score=184.28  Aligned_cols=191  Identities=24%  Similarity=0.408  Sum_probs=166.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++++.||.|++|++. ..+....+..|...+..+.|+|++ .+++++.|+.+++||+.+++.+..+..|...+.
T Consensus        19 ~~~~~l~~~~~~g~i~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~   97 (289)
T cd00200          19 PDGKLLATGSGDGTIKVWDLE-TGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVS   97 (289)
T ss_pred             CCCCEEEEeecCcEEEEEEee-CCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEE
Confidence            578899999999999999998 566777888899999999999855 799999999999999998888888888888999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      ++.|+|++.++++++.++.+.+||+++++....+             ..|...+.+++|+|++.++++++.++.|++||+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------------~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~  164 (289)
T cd00200          98 SVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTL-------------RGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDL  164 (289)
T ss_pred             EEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEe-------------ccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEc
Confidence            9999999888888888999999999877766543             467788999999999999999888999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +..+....+.               .|...+.+++|+|+++.+++++.|+.|++||+.+++
T Consensus       165 ~~~~~~~~~~---------------~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~  210 (289)
T cd00200         165 RTGKCVATLT---------------GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK  210 (289)
T ss_pred             cccccceeEe---------------cCccccceEEECCCcCEEEEecCCCcEEEEECCCCc
Confidence            8766554443               466689999999999999999999999999998643

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=4.2e-30  Score=194.38  Aligned_cols=189  Identities=12%  Similarity=0.180  Sum_probs=150.6

Q ss_pred             CCceEEEEeCCCeEEEEEecCC---------cee---eEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCC--
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNT---------KEA---LAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKP--   65 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~---------~~~---~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~--   65 (221)
                      |+..+++++.+.....|+....         ++.   ...+.+|.+.|.+++|+| + ..|++++.|++|++||+.++  
T Consensus        31 d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~  110 (493)
T PTZ00421         31 DCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGL  110 (493)
T ss_pred             CCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCcc
Confidence            5566777777777777775411         111   124678999999999998 4 56999999999999999764  


Q ss_pred             -----ccceeeeccccceeEEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe
Q psy10662         66 -----NCLRSFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA  139 (221)
Q Consensus        66 -----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  139 (221)
                           +++..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..             +.+|...|.+++|+
T Consensus       111 ~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~-------------l~~h~~~V~sla~s  177 (493)
T PTZ00421        111 TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEV-------------IKCHSDQITSLEWN  177 (493)
T ss_pred             ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEE-------------EcCCCCceEEEEEE
Confidence                 3456778899999999999986 6899999999999999998876544             46788899999999


Q ss_pred             cCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccc-eeEEEEcCCCcEEEEec----CCCeEEEE
Q psy10662        140 TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF-VSAVCWRQLSRVLVAAN----SQGIIKIY  214 (221)
Q Consensus       140 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~----~dg~i~iw  214 (221)
                      |++++|++++.|+.|++||+++++.+..+.               +|... +..+.|.+++..+++++    .|+.|++|
T Consensus       178 pdG~lLatgs~Dg~IrIwD~rsg~~v~tl~---------------~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklW  242 (493)
T PTZ00421        178 LDGSLLCTTSKDKKLNIIDPRDGTIVSSVE---------------AHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLW  242 (493)
T ss_pred             CCCCEEEEecCCCEEEEEECCCCcEEEEEe---------------cCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEE
Confidence            999999999999999999999887665543               34433 34678899887777654    48999999


Q ss_pred             ECCc
Q psy10662        215 VIPI  218 (221)
Q Consensus       215 ~~~~  218 (221)
                      |+++
T Consensus       243 Dlr~  246 (493)
T PTZ00421        243 DTRK  246 (493)
T ss_pred             eCCC
Confidence            9975

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=2e-30  Score=197.31  Aligned_cols=180  Identities=11%  Similarity=0.110  Sum_probs=146.4

Q ss_pred             EeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCc--------cceeeeccccce
Q psy10662          9 GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPN--------CLRSFVGHINDK   78 (221)
Q Consensus         9 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~--------~~~~~~~~~~~v   78 (221)
                      |+.++.|++|+.. ....+..+.+|.++|.+++|+|.  ..|++|+.|++|++||+.++.        ++..+.+|...|
T Consensus        50 GG~~gvI~L~~~~-r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V  128 (568)
T PTZ00420         50 GGLIGAIRLENQM-RKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI  128 (568)
T ss_pred             CCceeEEEeeecC-CCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence            5567889999987 45677889999999999999973  579999999999999997642        234567899999


Q ss_pred             eEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         79 NFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        79 ~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      .+++|+|++.. +++++.|+.|++||+++++.+..+              .+...|.+++|+|+|++|++++.|+.|++|
T Consensus       129 ~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i--------------~~~~~V~SlswspdG~lLat~s~D~~IrIw  194 (568)
T PTZ00420        129 SIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQI--------------NMPKKLSSLKWNIKGNLLSGTCVGKHMHII  194 (568)
T ss_pred             EEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEE--------------ecCCcEEEEEECCCCCEEEEEecCCEEEEE
Confidence            99999999876 578999999999999988765442              245679999999999999999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccce-----eEEEEcCCCcEEEEecCCC----eEEEEECCc
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV-----SAVCWRQLSRVLVAANSQG----IIKIYVIPI  218 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg----~i~iw~~~~  218 (221)
                      |+++++.+..+.               +|...+     ....|++++.+|++++.|+    .|++||++.
T Consensus       195 D~Rsg~~i~tl~---------------gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~  249 (568)
T PTZ00420        195 DPRKQEIASSFH---------------IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN  249 (568)
T ss_pred             ECCCCcEEEEEe---------------cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence            999887765553               454433     2334668999999987664    799999984

>KOG0283|consensus

Probab=100.00  E-value=2.7e-31  Score=200.72  Aligned_cols=198  Identities=16%  Similarity=0.238  Sum_probs=163.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecC--------------------------------C-------------------------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN--------------------------------T-------------------------   23 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~--------------------------------~-------------------------   23 (221)
                      +||++||+|+.|+.|+||.+..                                .                         
T Consensus       277 ~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~~p~~~f~  356 (712)
T KOG0283|consen  277 HDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVLLPLKAFV  356 (712)
T ss_pred             CCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCccccCCCcccc
Confidence            6899999999999999998764                                0                         


Q ss_pred             --ceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeC-CCCEEEEecCCCeEE
Q psy10662         24 --KEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLAT-DGDYVACGSENNSLY  100 (221)
Q Consensus        24 --~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~  100 (221)
                        .+++..+.+|.+.|..|.|+.+++|++++.|.+|++|++...++++.|. |.+.|+|++|+| |.+||++|+-|+.|+
T Consensus       357 f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvR  435 (712)
T KOG0283|consen  357 FSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVR  435 (712)
T ss_pred             ccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceE
Confidence              0344567889999999999999999999999999999999999999885 999999999999 556999999999999


Q ss_pred             EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccc
Q psy10662        101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERD  180 (221)
Q Consensus       101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~  180 (221)
                      ||++...+.+.              +..-..-|++++|.|+|++.++|+.+|.+++|+....+....+.....+....  
T Consensus       436 iWsI~d~~Vv~--------------W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~--  499 (712)
T KOG0283|consen  436 LWSISDKKVVD--------------WNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKK--  499 (712)
T ss_pred             EeecCcCeeEe--------------ehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccc--
Confidence            99998766543              23344779999999999999999999999999998888776665444322211  


Q ss_pred             ccccccccceeEEEEcCCC-cEEEEecCCCeEEEEECCccc
Q psy10662        181 RNEDDTNEFVSAVCWRQLS-RVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       181 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~  220 (221)
                          .|. .|+++.|.|.. ..+++.+.|..|+|+|.+...
T Consensus       500 ----~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~  535 (712)
T KOG0283|consen  500 ----QGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKD  535 (712)
T ss_pred             ----cCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchh
Confidence                233 79999999843 346666789999999996543

>KOG0296|consensus

Probab=100.00  E-value=3.3e-30  Score=178.53  Aligned_cols=198  Identities=14%  Similarity=0.255  Sum_probs=167.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      ||.+||||+.+|.|+||... ++.....+...-..|.=+.|+|. ..|++|+.||.+-+|.+.++...+.+.+|..++++
T Consensus       117 dgtlLATGdmsG~v~v~~~s-tg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~  195 (399)
T KOG0296|consen  117 DGTLLATGDMSGKVLVFKVS-TGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTC  195 (399)
T ss_pred             CceEEEecCCCccEEEEEcc-cCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCccc
Confidence            78999999999999999998 56656666545667888899984 55889999999999999998888889999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE----------------------------------------------
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR----------------------------------------------  114 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------------------------------------------  114 (221)
                      =.|.|+|+.++++..||+|++|++.+++++....                                              
T Consensus       196 G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~  275 (399)
T KOG0296|consen  196 GEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTV  275 (399)
T ss_pred             ccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCC
Confidence            9999999999999999999999999998887765                                              


Q ss_pred             -------------------------------------eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662        115 -------------------------------------FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus       115 -------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                                                           |+.....+ +..-.|...|..+.|.+ ..+|++++.+|.|+.|
T Consensus       276 ~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~-R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~w  353 (399)
T KOG0296|consen  276 PELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTL-RHICEHEDGVTKLKWLN-TDYLLTACANGKVRQW  353 (399)
T ss_pred             ccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchh-heeccCCCceEEEEEcC-cchheeeccCceEEee
Confidence                                                 11111111 22235667788888888 6788888899999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      |.+++..+..+.               +|...|.+++++|++++++++|.|++.++|+++
T Consensus       354 DaRtG~l~~~y~---------------GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  354 DARTGQLKFTYT---------------GHQMGILDFALSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             eccccceEEEEe---------------cCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence            999988887775               899999999999999999999999999999986

>KOG0294|consensus

Probab=100.00  E-value=7e-31  Score=178.87  Aligned_cols=201  Identities=17%  Similarity=0.274  Sum_probs=159.6

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      ++.++|+|+.|-+|+|||+. ....+..+-.|.+.|+++.|.+.   ..|++|+.||.|.+|+....+++..+++|.+.|
T Consensus        52 s~~~~aSGssDetI~IYDm~-k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~V  130 (362)
T KOG0294|consen   52 SGPYVASGSSDETIHIYDMR-KRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQV  130 (362)
T ss_pred             cceeEeccCCCCcEEEEecc-chhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeeccccccc
Confidence            57899999999999999998 67777888889999999999953   379999999999999999999999999999999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------eecccceeEeeE-------E----------EeeCc
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------FDTVRSMLESSF-------V----------GHIND  132 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------~~~~~~~~~~~~-------~----------~~~~~  132 (221)
                      +.++++|.+++.++.+.|+.++.||+-.++.-...+         |.+.........       .          .....
T Consensus       131 t~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r  210 (362)
T KOG0294|consen  131 TDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKR  210 (362)
T ss_pred             ceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhcccc
Confidence            999999999999999999999999997776544332         333222111100       0          01122


Q ss_pred             eEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE--cCCCcEEEEecCCCe
Q psy10662        133 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW--RQLSRVLVAANSQGI  210 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~  210 (221)
                      +.++.|. ++..+++|++|+.|.+||.....+...+               .+|...|.++.+  .|++.+|+++|.||.
T Consensus       211 ~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~---------------~AH~~RVK~i~~~~~~~~~~lvTaSSDG~  274 (362)
T KOG0294|consen  211 ILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEF---------------LAHENRVKDIASYTNPEHEYLVTASSDGF  274 (362)
T ss_pred             ceeeeec-CCceEEEecCCceEEEeccCCCccceee---------------ecchhheeeeEEEecCCceEEEEeccCce
Confidence            4444444 4567888888999999988776555444               379999999884  567899999999999


Q ss_pred             EEEEECCcc
Q psy10662        211 IKIYVIPIR  219 (221)
Q Consensus       211 i~iw~~~~~  219 (221)
                      |++||++..
T Consensus       275 I~vWd~~~~  283 (362)
T KOG0294|consen  275 IKVWDIDME  283 (362)
T ss_pred             EEEEEcccc
Confidence            999999865

>KOG0305|consensus

Probab=100.00  E-value=3.4e-31  Score=194.85  Aligned_cols=203  Identities=14%  Similarity=0.238  Sum_probs=171.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcccee-eeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRS-FVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~-~~~~~~~v   78 (221)
                      ++|++||+|..+|.|.|||.. ..+.+..+.+ |...|-+++|. +..+.+|+.|+.|..+|++..+.... +.+|...|
T Consensus       227 ~~G~~LavG~~~g~v~iwD~~-~~k~~~~~~~~h~~rvg~laW~-~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeV  304 (484)
T KOG0305|consen  227 PDGSHLAVGTSDGTVQIWDVK-EQKKTRTLRGSHASRVGSLAWN-SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEV  304 (484)
T ss_pred             CCCCEEEEeecCCeEEEEehh-hccccccccCCcCceeEEEecc-CceEEEecCCCcEEEEEEecchhhhhhhhccccee
Confidence            579999999999999999998 6677778887 99999999998 56788999999999999998876665 78899999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEec--CCCeEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGS--ENNSLY  155 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~d~~i~  155 (221)
                      ..+.|++++.++|+|+.|+.+.|||....+++..             +..|...|..++|+| ...+||+|+  .|+.|+
T Consensus       305 CgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~-------------~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~  371 (484)
T KOG0305|consen  305 CGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFT-------------FTEHTAAVKALAWCPWQSGLLATGGGSADRCIK  371 (484)
T ss_pred             eeeEECCCCCeeccCCCccceEeccCCCccccEE-------------EeccceeeeEeeeCCCccCceEEcCCCcccEEE
Confidence            9999999999999999999999999966666554             489999999999999 566888866  699999


Q ss_pred             EEEcCCCCceeeee---------eecccc-------------------cccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        156 IYYKGLSKHMHAYR---------FDTVRS-------------------MLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       156 ~~d~~~~~~~~~~~---------~~~~~~-------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      +||..++..+..+.         |....+                   .+.....+.+|...|..++++|||..+++|+.
T Consensus       372 fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~  451 (484)
T KOG0305|consen  372 FWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAA  451 (484)
T ss_pred             EEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecc
Confidence            99988776654442         222110                   12244556799999999999999999999999


Q ss_pred             CCeEEEEECCc
Q psy10662        208 QGIIKIYVIPI  218 (221)
Q Consensus       208 dg~i~iw~~~~  218 (221)
                      |.++++|++-.
T Consensus       452 DETlrfw~~f~  462 (484)
T KOG0305|consen  452 DETLRFWNLFD  462 (484)
T ss_pred             cCcEEeccccC
Confidence            99999999854

>KOG0282|consensus

Probab=100.00  E-value=1.8e-31  Score=190.72  Aligned_cols=197  Identities=17%  Similarity=0.286  Sum_probs=163.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      +|..+++++.|+.|++||++ +++++..+. -...++|+.|+|+  +.+++|+.|+.|+.||+++++.++.+..|-+.|.
T Consensus       269 ~g~~fLS~sfD~~lKlwDtE-TG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~  346 (503)
T KOG0282|consen  269 CGTSFLSASFDRFLKLWDTE-TGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAIL  346 (503)
T ss_pred             cCCeeeeeecceeeeeeccc-cceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhhee
Confidence            67899999999999999999 899888887 4567899999985  4588999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe------------------------------e---cccceeEeeE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF------------------------------D---TVRSMLESSF  126 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~------------------------------~---~~~~~~~~~~  126 (221)
                      .+.|-+++.++++.++|+.++||+.+.+-+++....                              .   .......+.+
T Consensus       347 ~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~f  426 (503)
T KOG0282|consen  347 DITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRF  426 (503)
T ss_pred             eeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhh
Confidence            999999999999999999999999877755543320                              0   0011112345


Q ss_pred             EEeeC--ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC-CcEEE
Q psy10662        127 VGHIN--DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL-SRVLV  203 (221)
Q Consensus       127 ~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~  203 (221)
                      .+|..  .-..+.|||||.+|++|+.||.+.+||.++.+....+               ..|+.++..+.|+|. ...+|
T Consensus       427 eGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~l---------------kah~~~ci~v~wHP~e~Skva  491 (503)
T KOG0282|consen  427 EGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKL---------------KAHDQPCIGVDWHPVEPSKVA  491 (503)
T ss_pred             cceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcc---------------ccCCcceEEEEecCCCcceeE
Confidence            56654  4456889999999999999999999998887765544               378899999999995 46899


Q ss_pred             EecCCCeEEEEE
Q psy10662        204 AANSQGIIKIYV  215 (221)
Q Consensus       204 ~~~~dg~i~iw~  215 (221)
                      +++.||.|++|+
T Consensus       492 t~~w~G~Ikiwd  503 (503)
T KOG0282|consen  492 TCGWDGLIKIWD  503 (503)
T ss_pred             ecccCceeEecC
Confidence            999999999996

>KOG0293|consensus

Probab=99.98  E-value=3.6e-31  Score=186.27  Aligned_cols=202  Identities=19%  Similarity=0.308  Sum_probs=159.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeee-cccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFV-GHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~-~~~~   76 (221)
                      ++|++||+|+.|.+..+|.+....  +..+++.+|..+|..+.|+| +++|++|+.|..+.+||+.++.....+. ++..
T Consensus       234 ~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~  313 (519)
T KOG0293|consen  234 HNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGF  313 (519)
T ss_pred             CCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCC
Confidence            589999999999999999987433  45778899999999999998 5669999999999999999999887763 3457


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCe----------eeEEEE--------------------------------
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSK----------HMHAYR--------------------------------  114 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~----------~~~~~~--------------------------------  114 (221)
                      .+.+++|.|||..+++|+.|+.+..||+....          .+..+.                                
T Consensus       314 S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis  393 (519)
T KOG0293|consen  314 SVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS  393 (519)
T ss_pred             CcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc
Confidence            89999999999999999999999999874321          111111                                


Q ss_pred             ----------------------------eecccceeEeeEEEeeCce--EEEEEe-cCCCEEEEecCCCeEEEEEcCCCC
Q psy10662        115 ----------------------------FDTVRSMLESSFVGHINDK--NFVGLA-TDGDYVACGSENNSLYIYYKGLSK  163 (221)
Q Consensus       115 ----------------------------~~~~~~~~~~~~~~~~~~v--~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~  163 (221)
                                                  |+......+..+.||...-  ..-+|. -+..++++|++|+.|++|+..+++
T Consensus       394 e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgk  473 (519)
T KOG0293|consen  394 EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGK  473 (519)
T ss_pred             ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCc
Confidence                                        3333333334444554432  222343 245799999999999999999998


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEECC
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~  217 (221)
                      .+..+.               +|...|++++|+| +-.++|+++.||+|+||-..
T Consensus       474 ll~~Ls---------------GHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~  513 (519)
T KOG0293|consen  474 LLAVLS---------------GHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS  513 (519)
T ss_pred             eeEeec---------------CCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence            877664               8999999999999 55789999999999999875

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.98  E-value=1.1e-29  Score=204.82  Aligned_cols=207  Identities=11%  Similarity=0.189  Sum_probs=162.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCC---c----eeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNT---K----EALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~---~----~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      |++++||+|+.|+.|+||++...   .    .+...+. +...+.+++|++  +..|++++.||+|++||+.+++.+..+
T Consensus       493 ~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~  571 (793)
T PLN00181        493 RDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEM  571 (793)
T ss_pred             CCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence            68899999999999999997521   1    1223333 456899999986  467999999999999999999988889


Q ss_pred             eccccceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------------eecccce
Q psy10662         72 VGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRSM  121 (221)
Q Consensus        72 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~  121 (221)
                      .+|...|++++|+| ++.+|++|+.|+.|++||+++++.+..+.                             |+.....
T Consensus       572 ~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~  651 (793)
T PLN00181        572 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPK  651 (793)
T ss_pred             cCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence            99999999999997 77899999999999999998876655432                             2222221


Q ss_pred             -eEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662        122 -LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR  200 (221)
Q Consensus       122 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  200 (221)
                       ....+.+|...|.++.|. ++.+|++++.|+.|++||++.....         .....+..+.+|...+..++|+|++.
T Consensus       652 ~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~---------~~~~~l~~~~gh~~~i~~v~~s~~~~  721 (793)
T PLN00181        652 LPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISG---------INETPLHSFMGHTNVKNFVGLSVSDG  721 (793)
T ss_pred             ccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccc---------cCCcceEEEcCCCCCeeEEEEcCCCC
Confidence             234556788899999997 6789999999999999998753210         00112233457888899999999999


Q ss_pred             EEEEecCCCeEEEEECCc
Q psy10662        201 VLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       201 ~l~~~~~dg~i~iw~~~~  218 (221)
                      +|++|+.|+.|++|+...
T Consensus       722 ~lasgs~D~~v~iw~~~~  739 (793)
T PLN00181        722 YIATGSETNEVFVYHKAF  739 (793)
T ss_pred             EEEEEeCCCEEEEEECCC
Confidence            999999999999999753

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.98  E-value=7.7e-30  Score=182.84  Aligned_cols=191  Identities=24%  Similarity=0.438  Sum_probs=163.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++++.+|.|++|++. .++.+..+..|...+.++.|++++. +++++.|+.+++||+++++....+..|...+.
T Consensus        61 ~~~~~l~~~~~~~~i~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~  139 (289)
T cd00200          61 ADGTYLASGSSDKTIRLWDLE-TGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVN  139 (289)
T ss_pred             CCCCEEEEEcCCCeEEEEEcC-cccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEE
Confidence            467789999999999999998 5567778888999999999998655 55566699999999998888888888888999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++|+|++.++++++.++.|.+||+++++.+..+             ..+...+.++.|+|+++.+++++.++.+++||+
T Consensus       140 ~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~-------------~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~  206 (289)
T cd00200         140 SVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATL-------------TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDL  206 (289)
T ss_pred             EEEEcCcCCEEEEEcCCCcEEEEEccccccceeE-------------ecCccccceEEECCCcCEEEEecCCCcEEEEEC
Confidence            9999999888988888999999999877766543             467778999999999999999999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.++....+.               .|...+.+++|+|++.++++++.||.|++|++.+++
T Consensus       207 ~~~~~~~~~~---------------~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~  252 (289)
T cd00200         207 STGKCLGTLR---------------GHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE  252 (289)
T ss_pred             CCCceecchh---------------hcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCce
Confidence            8765544332               466689999999999999998889999999998643

>KOG0640|consensus

Probab=99.98  E-value=3.8e-31  Score=180.31  Aligned_cols=196  Identities=14%  Similarity=0.268  Sum_probs=163.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecC-----------------CceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN-----------------TKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNI   62 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~-----------------~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~   62 (221)
                      |||.++|+|+.|-.|+|.|++.                 ....++++..|-++|+++.|+| +..|++++.|++|++||+
T Consensus       122 ~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDf  201 (430)
T KOG0640|consen  122 PDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDF  201 (430)
T ss_pred             CCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCCeEEEEec
Confidence            6999999999999999999861                 0135678888999999999998 566899999999999999


Q ss_pred             CCCccceeee--ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         63 NKPNCLRSFV--GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        63 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                      ......+.++  ....+|.++.|+|.|.+++.|.....+++||+.+.++...-+          .-..|...|+++.+++
T Consensus       202 sK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan----------Pd~qht~ai~~V~Ys~  271 (430)
T KOG0640|consen  202 SKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN----------PDDQHTGAITQVRYSS  271 (430)
T ss_pred             ccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC----------cccccccceeEEEecC
Confidence            7754433222  234589999999999999999999999999999888754421          1257889999999999


Q ss_pred             CCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccc-ccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        141 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT-NEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       141 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .+++.++++.||.|++||=-+++++..+.              ..| ...|.++.|..+|+|+++.+.|..+++|++.++
T Consensus       272 t~~lYvTaSkDG~IklwDGVS~rCv~t~~--------------~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~  337 (430)
T KOG0640|consen  272 TGSLYVTASKDGAIKLWDGVSNRCVRTIG--------------NAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG  337 (430)
T ss_pred             CccEEEEeccCCcEEeeccccHHHHHHHH--------------hhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC
Confidence            99999999999999999987777765553              123 456899999999999999999999999999886


Q ss_pred             c
Q psy10662        220 V  220 (221)
Q Consensus       220 ~  220 (221)
                      .
T Consensus       338 R  338 (430)
T KOG0640|consen  338 R  338 (430)
T ss_pred             c
Confidence            4

>KOG0264|consensus

Probab=99.98  E-value=7.4e-31  Score=186.07  Aligned_cols=202  Identities=17%  Similarity=0.252  Sum_probs=165.6

Q ss_pred             CceEEEEeCCCeEEEEEecCCc------eeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcC--CCccceeee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTK------EALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNIN--KPNCLRSFV   72 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~------~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~--~~~~~~~~~   72 (221)
                      ...|++|+.|+.|++||+....      .+...+.+|.+.|..++|++  ...|++++.|+.+.|||++  +.++.....
T Consensus       190 ~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~  269 (422)
T KOG0264|consen  190 EGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVK  269 (422)
T ss_pred             ceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccccc
Confidence            3478999999999999997433      24567889999999999996  5668999999999999999  556666778


Q ss_pred             ccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEecC
Q psy10662         73 GHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACGSE  150 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~  150 (221)
                      +|.++|+|++|+|-+. .||+|+.|++|.+||++..+.            ....+.+|...|..+.|+|. ...||+++.
T Consensus       270 ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~------------~lh~~e~H~dev~~V~WSPh~etvLASSg~  337 (422)
T KOG0264|consen  270 AHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK------------PLHTFEGHEDEVFQVEWSPHNETVLASSGT  337 (422)
T ss_pred             ccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc------------CceeccCCCcceEEEEeCCCCCceeEeccc
Confidence            9999999999999665 679999999999999986543            33457899999999999995 457899999


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE-EEEecCCCeEEEEECC
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV-LVAANSQGIIKIYVIP  217 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iw~~~  217 (221)
                      |+.+.+||+..-...+... +......+.+..+.+|...|..+.|+|+..+ +++.+.|+.+.||+..
T Consensus       338 D~rl~vWDls~ig~eq~~e-da~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  338 DRRLNVWDLSRIGEEQSPE-DAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             CCcEEEEeccccccccChh-hhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence            9999999997655444321 2234455556677899999999999998765 6778899999999975

>KOG1446|consensus

Probab=99.97  E-value=5e-29  Score=169.79  Aligned_cols=207  Identities=14%  Similarity=0.226  Sum_probs=168.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecC--CCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSAST--DSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~--d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      ++|.+|++++.|..+++||.. .++.++++..++-.+..++|- +...++.++.  |.+|+..++.+.+.++.+.+|...
T Consensus        24 ~~G~~litss~dDsl~LYd~~-~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~  102 (311)
T KOG1446|consen   24 DDGLLLITSSEDDSLRLYDSL-SGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKR  102 (311)
T ss_pred             CCCCEEEEecCCCeEEEEEcC-CCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCce
Confidence            478999999999999999998 788899999888889999996 5566666665  899999999999999999999999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE--------eeccc-------ce-eE-------------eeEE-
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR--------FDTVR-------SM-LE-------------SSFV-  127 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------~~~~~-------~~-~~-------------~~~~-  127 (221)
                      |.+++.+|-++.+++++.|++|++||++..++...+.        +|+..       .. .+             ..+. 
T Consensus       103 V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i  182 (311)
T KOG1446|consen  103 VNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSI  182 (311)
T ss_pred             EEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEcc
Confidence            9999999999999999999999999999877765554        11110       00 11             1111 


Q ss_pred             --EeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662        128 --GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       128 --~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                        +...+.+.+.|+|+|++|+.++..+.+++.|.-++..+..+...+..            ...-...+|+||++++++|
T Consensus       183 ~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~------------~~~~~~a~ftPds~Fvl~g  250 (311)
T KOG1446|consen  183 TDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNA------------GNLPLSATFTPDSKFVLSG  250 (311)
T ss_pred             CCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCC------------CCcceeEEECCCCcEEEEe
Confidence              23456788999999999999999999999999999877777643321            1112578999999999999


Q ss_pred             cCCCeEEEEECCccc
Q psy10662        206 NSQGIIKIYVIPIRV  220 (221)
Q Consensus       206 ~~dg~i~iw~~~~~~  220 (221)
                      +.||+|++|++++++
T Consensus       251 s~dg~i~vw~~~tg~  265 (311)
T KOG1446|consen  251 SDDGTIHVWNLETGK  265 (311)
T ss_pred             cCCCcEEEEEcCCCc
Confidence            999999999999875

>KOG0289|consensus

Probab=99.97  E-value=3.8e-30  Score=181.97  Aligned_cols=189  Identities=17%  Similarity=0.271  Sum_probs=167.0

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      .+.+++|+.|..+.++|.. ..+.+..+++|...|+.+.|+|. ..+++++.|..|++|.............|..+|+.+
T Consensus       231 ~~~ilTGG~d~~av~~d~~-s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~l  309 (506)
T KOG0289|consen  231 SSKILTGGEDKTAVLFDKP-SNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGL  309 (506)
T ss_pred             CCcceecCCCCceEEEecc-hhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceee
Confidence            3678999999999999998 78899999999999999999985 558899999999999998877777788899999999


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      ..+|+|+||++++.|++..+.|++++..+....           -....-.+++.+|+|||.++.+|..|+.+++||+.+
T Consensus       310 s~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs-----------~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks  378 (506)
T KOG0289|consen  310 SLHPTGEYLLSASNDGTWAFSDISSGSQLTVVS-----------DETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKS  378 (506)
T ss_pred             eeccCCcEEEEecCCceEEEEEccCCcEEEEEe-----------eccccceeEEeeEcCCceEEeccCCCceEEEEEcCC
Confidence            999999999999999999999999988765531           112334688999999999999999999999999987


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ......|               .+|.++|..++|+.+|-||++++.|+.|++||++.
T Consensus       379 ~~~~a~F---------------pght~~vk~i~FsENGY~Lat~add~~V~lwDLRK  420 (506)
T KOG0289|consen  379 QTNVAKF---------------PGHTGPVKAISFSENGYWLATAADDGSVKLWDLRK  420 (506)
T ss_pred             ccccccC---------------CCCCCceeEEEeccCceEEEEEecCCeEEEEEehh
Confidence            7654443               48999999999999999999999999999999975

>KOG0292|consensus

Probab=99.97  E-value=1.7e-30  Score=198.00  Aligned_cols=204  Identities=14%  Similarity=0.204  Sum_probs=173.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |....++++-..|.|++||.+ .+.++..|..|.++|..++|+| +..+++|+.|-.|++|+..+.+++.++.+|-+.|.
T Consensus        19 P~rPwILtslHsG~IQlWDYR-M~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVR   97 (1202)
T KOG0292|consen   19 PKRPWILTSLHSGVIQLWDYR-MGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVR   97 (1202)
T ss_pred             CCCCEEEEeecCceeeeehhh-hhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeE
Confidence            445678899999999999998 8899999999999999999998 45688999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      .+.|++.-..++++|.|.+|+||+..+.+++..+             .+|...|.|..|+|....+++++-|.+|++||+
T Consensus        98 t~~FHheyPWIlSASDDQTIrIWNwqsr~~iavl-------------tGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDi  164 (1202)
T KOG0292|consen   98 TVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVL-------------TGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDI  164 (1202)
T ss_pred             EeeccCCCceEEEccCCCeEEEEeccCCceEEEE-------------ecCceEEEeeccCCccceEEEecccceEEEEee
Confidence            9999999999999999999999999998888764             899999999999999999999999999999997


Q ss_pred             CCCCcee----eeeee---------ccc-ccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        160 GLSKHMH----AYRFD---------TVR-SMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       160 ~~~~~~~----~~~~~---------~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .--+...    .++-.         ..+ ........+++|+..|+-++|+|.-.++++|+.|..|++|....
T Consensus       165 sGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne  237 (1202)
T KOG0292|consen  165 SGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE  237 (1202)
T ss_pred             cchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc
Confidence            5321110    00000         000 01112234679999999999999999999999999999999864

>KOG0281|consensus

Probab=99.97  E-value=3.5e-31  Score=183.07  Aligned_cols=204  Identities=17%  Similarity=0.247  Sum_probs=170.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCc---cceeeeccccce
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN---CLRSFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~---~~~~~~~~~~~v   78 (221)
                      +.+.|++|+.|.+|+|||++ +++++.++-+|...|..+.|+ ++++++++.|.++.+||+....   +.+.+.+|...|
T Consensus       246 d~rviisGSSDsTvrvWDv~-tge~l~tlihHceaVLhlrf~-ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaV  323 (499)
T KOG0281|consen  246 DERVIVSGSSDSTVRVWDVN-TGEPLNTLIHHCEAVLHLRFS-NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV  323 (499)
T ss_pred             cceEEEecCCCceEEEEecc-CCchhhHHhhhcceeEEEEEe-CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhhe
Confidence            45789999999999999998 899999999999999999997 4789999999999999998764   334568999999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------------------------eecccceeEeeEEEeeC
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------------------------FDTVRSMLESSFVGHIN  131 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~  131 (221)
                      +.+.|+  .+++++++.|.+|++|++.+.+.++++.                           |+...+.+++.+++|..
T Consensus       324 NvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEe  401 (499)
T KOG0281|consen  324 NVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE  401 (499)
T ss_pred             eeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhccCeEEEecCCCceEEEEeccccHHHHHHhchHH
Confidence            999996  4599999999999999999998887765                           56666667777889999


Q ss_pred             ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662        132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  211 (221)
                      -|.++.|.  .+.|++|+.||+|++||+.++......      ....++..+..|.+.|..+.|  |...+++++.|.+|
T Consensus       402 LvRciRFd--~krIVSGaYDGkikvWdl~aaldpra~------~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtI  471 (499)
T KOG0281|consen  402 LVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAP------ASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTI  471 (499)
T ss_pred             hhhheeec--CceeeeccccceEEEEecccccCCccc------ccchHHHhhhhccceeEEEee--cceEEEeccCCCeE
Confidence            99999996  468999999999999999876543221      111234445578889999999  56789999999999


Q ss_pred             EEEECCcc
Q psy10662        212 KIYVIPIR  219 (221)
Q Consensus       212 ~iw~~~~~  219 (221)
                      .+||+..+
T Consensus       472 LiWdFl~~  479 (499)
T KOG0281|consen  472 LIWDFLNG  479 (499)
T ss_pred             EEEEcCCC
Confidence            99998754

>KOG0313|consensus

Probab=99.97  E-value=1.4e-29  Score=176.24  Aligned_cols=215  Identities=17%  Similarity=0.211  Sum_probs=167.1

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cC---CcEEEecCCCcEEEEEcCCCccc----eeeecc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NK---EDIVSASTDSQLKLWNINKPNCL----RSFVGH   74 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~---~~l~s~~~d~~v~~wd~~~~~~~----~~~~~~   74 (221)
                      +..+++|+.||.+++||..  ++...++.+|.++|.+++|. ++   ..+++++.|.++++|.++.++..    ....+|
T Consensus       115 ~~~IltgsYDg~~riWd~~--Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GH  192 (423)
T KOG0313|consen  115 SKWILTGSYDGTSRIWDLK--GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGH  192 (423)
T ss_pred             CceEEEeecCCeeEEEecC--CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhccc
Confidence            5789999999999999986  78889999999999999987 33   34999999999999999877543    334599


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCC--eeeEEE----------EeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLS--KHMHAY----------RFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~--~~~~~~----------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                      +..|.+++..+++..+++|+.|..+.||+..+.  ......          .-......++..+.+|..+|.++.|++ .
T Consensus       193 k~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~  271 (423)
T KOG0313|consen  193 KRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-A  271 (423)
T ss_pred             ccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-C
Confidence            999999999999999999999999999993211  111110          012233456677899999999999998 6


Q ss_pred             CEEEEecCCCeEEEEEcCCCCceeeeeee---------ccc--------------------ccccccccccccccceeEE
Q psy10662        143 DYVACGSENNSLYIYYKGLSKHMHAYRFD---------TVR--------------------SMLERDRNEDDTNEFVSAV  193 (221)
Q Consensus       143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---------~~~--------------------~~~~~~~~~~~~~~~v~~~  193 (221)
                      ..+++++.|.+|+.||+.++.....+.-.         +..                    .-....+.+.+|...|.++
T Consensus       272 ~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssv  351 (423)
T KOG0313|consen  272 TVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSV  351 (423)
T ss_pred             CceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhhe
Confidence            68999999999999999988766544211         100                    0011234456899999999


Q ss_pred             EEcCC-CcEEEEecCCCeEEEEECCccc
Q psy10662        194 CWRQL-SRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       194 ~~~~~-~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .|+|. ...|++++.|+++++||+++.+
T Consensus       352 kwsp~~~~~~~S~S~D~t~klWDvRS~k  379 (423)
T KOG0313|consen  352 KWSPTNEFQLVSGSYDNTVKLWDVRSTK  379 (423)
T ss_pred             ecCCCCceEEEEEecCCeEEEEEeccCC
Confidence            99995 4568899999999999998753

>KOG0313|consensus

Probab=99.97  E-value=9.8e-30  Score=177.06  Aligned_cols=190  Identities=19%  Similarity=0.301  Sum_probs=162.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecC------------------------CceeeEEEEeccCceEEEEEecCCcEEEecCCCc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN------------------------TKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQ   56 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~------------------------~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~   56 (221)
                      ++|.++++|+.|..|.||+.+.                        .+.++.++.+|..+|.++.|++...+++++.|.+
T Consensus       203 ~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHT  282 (423)
T KOG0313|consen  203 SSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHT  282 (423)
T ss_pred             CCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccce
Confidence            5789999999999999999321                        1246678899999999999999888999999999


Q ss_pred             EEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEE
Q psy10662         57 LKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFV  136 (221)
Q Consensus        57 v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  136 (221)
                      |+.||+.++..+..+.+ ....+++..+|..++|++|+.|..+++||.+++.-          .....++.+|.+.|.++
T Consensus       283 Ik~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~g----------s~v~~s~~gH~nwVssv  351 (423)
T KOG0313|consen  283 IKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDG----------SVVSQSLIGHKNWVSSV  351 (423)
T ss_pred             EEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCC----------ceeEEeeecchhhhhhe
Confidence            99999999999888764 55789999999999999999999999999987532          23345688999999999


Q ss_pred             EEecCC-CEEEEecCCCeEEEEEcCCCC-ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEE
Q psy10662        137 GLATDG-DYVACGSENNSLYIYYKGLSK-HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIY  214 (221)
Q Consensus       137 ~~~~~~-~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  214 (221)
                      .|+|.. ..|++++.|+++++||+++.+ +++.+               .+|...|.++.|+ ++.++++|+.|.+|+++
T Consensus       352 kwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI---------------~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~  415 (423)
T KOG0313|consen  352 KWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI---------------AGHNDKVLSVDWN-EGGLIVSGGADNKLRIF  415 (423)
T ss_pred             ecCCCCceEEEEEecCCeEEEEEeccCCCcceee---------------ccCCceEEEEecc-CCceEEeccCcceEEEe
Confidence            999954 568899999999999998876 55554               3789999999997 56789999999999998


Q ss_pred             ECC
Q psy10662        215 VIP  217 (221)
Q Consensus       215 ~~~  217 (221)
                      .-.
T Consensus       416 ~~~  418 (423)
T KOG0313|consen  416 KGS  418 (423)
T ss_pred             ccc
Confidence            654

>KOG0308|consensus

Probab=99.97  E-value=4.7e-31  Score=194.78  Aligned_cols=199  Identities=17%  Similarity=0.308  Sum_probs=168.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce-----eeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC--ccceeee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE-----ALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP--NCLRSFV   72 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~-----~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~--~~~~~~~   72 (221)
                      |++++|.+|+.||.|++|+......     ....++.|.+.|..++... ++.|+++|.|-+|++|+...+  -++..+.
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir  114 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIR  114 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhh
Confidence            5678899999999999999874322     3677889999999998874 568999999999999999877  5777888


Q ss_pred             ccccceeEEEE-eCCCCEEEEecCCCeEEEEECCCCe--eeEEEEeecccceeEeeEE-EeeCceEEEEEecCCCEEEEe
Q psy10662         73 GHINDKNFVGL-ATDGDYVACGSENNSLYIYYKGLSK--HMHAYRFDTVRSMLESSFV-GHINDKNFVGLATDGDYVACG  148 (221)
Q Consensus        73 ~~~~~v~~~~~-~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~  148 (221)
                      .|.+.|.|+++ .++..++|+||-|+.|.+||+.++.  .+..++  .   .....+. ++...+++++.++.|..|++|
T Consensus       115 ~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n--~---~t~~sl~sG~k~siYSLA~N~t~t~ivsG  189 (735)
T KOG0308|consen  115 THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFN--N---VTVNSLGSGPKDSIYSLAMNQTGTIIVSG  189 (735)
T ss_pred             cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcc--c---cccccCCCCCccceeeeecCCcceEEEec
Confidence            99999999999 7788899999999999999999873  333321  1   1112223 788899999999999999999


Q ss_pred             cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      +..+.+++||.++.+.+..+               .+|...|..+-.++||..++++|.||+|++||+...
T Consensus       190 gtek~lr~wDprt~~kimkL---------------rGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ  245 (735)
T KOG0308|consen  190 GTEKDLRLWDPRTCKKIMKL---------------RGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ  245 (735)
T ss_pred             CcccceEEeccccccceeee---------------eccccceEEEEEcCCCCeEeecCCCceEEeeecccc
Confidence            99999999999888765544               389999999999999999999999999999999754

>KOG0276|consensus

Probab=99.97  E-value=1.7e-29  Score=186.14  Aligned_cols=192  Identities=17%  Similarity=0.205  Sum_probs=171.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |....++++-.+|.|.||+.+ ++..++.++...-+|.+..|-+ .+.+++|+.|..|++|+..+++.+..+..|.+.|.
T Consensus        23 PtePw~la~LynG~V~IWnye-tqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR  101 (794)
T KOG0276|consen   23 PTEPWILAALYNGDVQIWNYE-TQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIR  101 (794)
T ss_pred             CCCceEEEeeecCeeEEEecc-cceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeecccccee
Confidence            445567888899999999998 7889999999999999999985 67799999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d  158 (221)
                      +++.+|...++++++.|-.|++||-+..            ..+.+.+.+|...|.+++|.| |.+.+++++-|++|++|.
T Consensus       102 ~iavHPt~P~vLtsSDDm~iKlW~we~~------------wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWs  169 (794)
T KOG0276|consen  102 SIAVHPTLPYVLTSSDDMTIKLWDWENE------------WACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWS  169 (794)
T ss_pred             eeeecCCCCeEEecCCccEEEEeeccCc------------eeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEE
Confidence            9999999999999999999999997643            234456799999999999999 677999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCC--CcEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL--SRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.+..+.++++               +|...|+++++-+-  ..+|++|+.|..|++||.+++.
T Consensus       170 lgs~~~nfTl~---------------gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~  218 (794)
T KOG0276|consen  170 LGSPHPNFTLE---------------GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKS  218 (794)
T ss_pred             cCCCCCceeee---------------ccccCcceEEeccCCCcceEEecCCCceEEEeecchHH
Confidence            98877766664               89999999999874  4799999999999999999864

>KOG0296|consensus

Probab=99.97  E-value=4.1e-29  Score=173.15  Aligned_cols=206  Identities=14%  Similarity=0.252  Sum_probs=170.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |+.++++||+.|..-.+|+.. ++.....+.+|++.|+++.|+ .+.+|+||..+|.|+||+..++.....+...-..+.
T Consensus        74 P~~~l~aTGGgDD~AflW~~~-~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~die  152 (399)
T KOG0296|consen   74 PNNNLVATGGGDDLAFLWDIS-TGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIE  152 (399)
T ss_pred             CCCceEEecCCCceEEEEEcc-CCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceE
Confidence            678999999999999999998 777888999999999999999 567799999999999999999988887765566788


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      =+.|+|.+..|++|+.||.+.+|.+.+....+             .+.+|..++++=.|.|+|+.++++..||+|++||.
T Consensus       153 Wl~WHp~a~illAG~~DGsvWmw~ip~~~~~k-------------v~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~  219 (399)
T KOG0296|consen  153 WLKWHPRAHILLAGSTDGSVWMWQIPSQALCK-------------VMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNP  219 (399)
T ss_pred             EEEecccccEEEeecCCCcEEEEECCCcceee-------------EecCCCCCcccccccCCCceEEEEecCceEEEEec
Confidence            89999999999999999999999988754433             35899999999999999999999999999999999


Q ss_pred             CCCCceeeeeee-----c--------------------------cccccc------------------------------
Q psy10662        160 GLSKHMHAYRFD-----T--------------------------VRSMLE------------------------------  178 (221)
Q Consensus       160 ~~~~~~~~~~~~-----~--------------------------~~~~~~------------------------------  178 (221)
                      .++.++..+.-.     +                          .++...                              
T Consensus       220 ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lp  299 (399)
T KOG0296|consen  220 KTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLP  299 (399)
T ss_pred             CCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccc
Confidence            998877666400     0                          000000                              


Q ss_pred             -------------------ccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        179 -------------------RDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       179 -------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                                         .++..-.|...|..+.|-+ ..+|++++.||.|+.||.++|.+
T Consensus       300 L~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l  360 (399)
T KOG0296|consen  300 LAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQL  360 (399)
T ss_pred             hhhcccccceEEEEecccchhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccce
Confidence                               0111125677899999988 68899999999999999998864

>KOG0310|consensus

Probab=99.97  E-value=7.1e-30  Score=182.68  Aligned_cols=197  Identities=19%  Similarity=0.291  Sum_probs=169.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      .||.+||+|+..|.|+|||+. +...++.+.+|..++..+.|+|  +..+++|+.|+.+++||+.+......+.+|++.|
T Consensus        78 ~DG~LlaaGD~sG~V~vfD~k-~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYV  156 (487)
T KOG0310|consen   78 SDGRLLAAGDESGHVKVFDMK-SRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYV  156 (487)
T ss_pred             cCCeEEEccCCcCcEEEeccc-cHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCccee
Confidence            389999999999999999965 6778889999999999999997  3448899999999999999988766889999999


Q ss_pred             eEEEEeCCCC-EEEEecCCCeEEEEECCCC-eeeEEEE---------------------------eecc-cceeEeeEEE
Q psy10662         79 NFVGLATDGD-YVACGSENNSLYIYYKGLS-KHMHAYR---------------------------FDTV-RSMLESSFVG  128 (221)
Q Consensus        79 ~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~-~~~~~~~---------------------------~~~~-~~~~~~~~~~  128 (221)
                      .|.+|+|... .+++|+.||.|++||+++. ..+.+++                           ||.. .++.+..+..
T Consensus       157 R~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~  236 (487)
T KOG0310|consen  157 RCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFN  236 (487)
T ss_pred             EeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhc
Confidence            9999999765 7899999999999999887 6666654                           4544 3344445556


Q ss_pred             eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       129 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      |...|+|+++..++..|++++-|+.+++||+.+.+.+..+.                ..++|.+++.+|+++.++.|..|
T Consensus       237 H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~----------------~~~pvLsiavs~dd~t~viGmsn  300 (487)
T KOG0310|consen  237 HNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK----------------YPGPVLSIAVSPDDQTVVIGMSN  300 (487)
T ss_pred             ccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee----------------cccceeeEEecCCCceEEEeccc
Confidence            99999999999999999999999999999988888877775                35689999999999999999999


Q ss_pred             CeEEEE
Q psy10662        209 GIIKIY  214 (221)
Q Consensus       209 g~i~iw  214 (221)
                      |.+.+=
T Consensus       301 Glv~~r  306 (487)
T KOG0310|consen  301 GLVSIR  306 (487)
T ss_pred             ceeeee
Confidence            987665

>KOG0316|consensus

Probab=99.97  E-value=9.8e-30  Score=167.15  Aligned_cols=186  Identities=17%  Similarity=0.265  Sum_probs=161.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCC--Cccceeeeccccce
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINK--PNCLRSFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~--~~~~~~~~~~~~~v   78 (221)
                      |...+++|+.|..|.+||++ +++.++.+.+|.+.|+.++|+. ...+++|+.|.++++||-++  .++++.+......|
T Consensus        70 Dnskf~s~GgDk~v~vwDV~-TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V  148 (307)
T KOG0316|consen   70 DNSKFASCGGDKAVQVWDVN-TGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGV  148 (307)
T ss_pred             cccccccCCCCceEEEEEcc-cCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCce
Confidence            67789999999999999998 8999999999999999999995 56688999999999999975  57888888788889


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      .++...  +..+++|+.||+++.||++.++....               ....+|+++.|+++++..++++.|+.+++.|
T Consensus       149 ~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sD---------------y~g~pit~vs~s~d~nc~La~~l~stlrLlD  211 (307)
T KOG0316|consen  149 SSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSD---------------YFGHPITSVSFSKDGNCSLASSLDSTLRLLD  211 (307)
T ss_pred             eEEEec--ccEEEeeccCCcEEEEEeecceeehh---------------hcCCcceeEEecCCCCEEEEeeccceeeecc
Confidence            999886  56899999999999999998877543               3456899999999999999999999999999


Q ss_pred             cCCCCceeeeeeeccccccccccccccccc--ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNE--FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ..+++.+..++               +|..  .-..++++.....+++|++||.+.+||+..++
T Consensus       212 k~tGklL~sYk---------------Ghkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~  260 (307)
T KOG0316|consen  212 KETGKLLKSYK---------------GHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDET  260 (307)
T ss_pred             cchhHHHHHhc---------------ccccceeeeeeeecccceeEEeccCCceEEEEEeccce
Confidence            99999887775               3432  23467888888899999999999999997654

>KOG0265|consensus

Probab=99.97  E-value=1.6e-29  Score=171.12  Aligned_cols=196  Identities=17%  Similarity=0.279  Sum_probs=162.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      +|++.|++++.|.+|+.||++ +++..+.++.|.+.|.++.-+. + ..+.+++.|+++++||+++.+.++.+. .+-++
T Consensus       100 ~d~s~i~S~gtDk~v~~wD~~-tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyql  177 (338)
T KOG0265|consen  100 RDGSHILSCGTDKTVRGWDAE-TGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQL  177 (338)
T ss_pred             cCCCEEEEecCCceEEEEecc-cceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeE
Confidence            488999999999999999999 8999999999999999998443 2 336789999999999999999888774 45679


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      +++.|..++..+++|+-|+.|++||++.+...+.             +.+|...|+.+..+|+|.++.+-+.|.++++||
T Consensus       178 tAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~-------------lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd  244 (338)
T KOG0265|consen  178 TAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYT-------------LSGHADTITGLSLSRYGSFLLSNSMDNTVRVWD  244 (338)
T ss_pred             EEEEecccccceeeccccCceeeeccccCcceEE-------------eecccCceeeEEeccCCCccccccccceEEEEE
Confidence            9999999999999999999999999988877765             489999999999999999999999999999999


Q ss_pred             cCCCCceee-eeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        159 KGLSKHMHA-YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       159 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++...+.+. +...        .......+.....++|+|+++.+.+|+.|..+++||..++
T Consensus       245 ~rp~~p~~R~v~if--------~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r  298 (338)
T KOG0265|consen  245 VRPFAPSQRCVKIF--------QGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSR  298 (338)
T ss_pred             ecccCCCCceEEEe--------ecchhhhhhhcceeeccCCCCccccccccceEEEeecccc
Confidence            875433221 1100        0001112233467899999999999999999999998764

>KOG0646|consensus

Probab=99.97  E-value=5e-29  Score=177.56  Aligned_cols=205  Identities=14%  Similarity=0.173  Sum_probs=167.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcC---------CCcccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNIN---------KPNCLRS   70 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~---------~~~~~~~   70 (221)
                      |+|.+|+.|...|.|++|.+. ++.++..+.+|-..|+|+.|+. +.+|++|+.||.|.+|.+.         +.++...
T Consensus        91 n~G~~l~ag~i~g~lYlWels-sG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~  169 (476)
T KOG0646|consen   91 NLGYFLLAGTISGNLYLWELS-SGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHI  169 (476)
T ss_pred             CCceEEEeecccCcEEEEEec-cccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceee
Confidence            578888888899999999998 8999999999999999999995 6779999999999999874         3466778


Q ss_pred             eeccccceeEEEEeCCC--CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe
Q psy10662         71 FVGHINDKNFVGLATDG--DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG  148 (221)
Q Consensus        71 ~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  148 (221)
                      +..|.-+|+.+...+.|  .++++++.|.++++||+..+..+.++              ..+..+.+++.+|.++.+.+|
T Consensus       170 f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti--------------~fp~si~av~lDpae~~~yiG  235 (476)
T KOG0646|consen  170 FSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTI--------------TFPSSIKAVALDPAERVVYIG  235 (476)
T ss_pred             eccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEE--------------ecCCcceeEEEcccccEEEec
Confidence            88899999999987654  48999999999999999999887765              345688999999999999999


Q ss_pred             cCCCeEEEEEcCCCCceee-eeeeccccccccccccccccc--ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        149 SENNSLYIYYKGLSKHMHA-YRFDTVRSMLERDRNEDDTNE--FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       149 ~~d~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +++|.|.+.++........ +.-............+.+|..  .|++++.+-||.+|++|+.||++.+||+.+++
T Consensus       236 t~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q  310 (476)
T KOG0646|consen  236 TEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQ  310 (476)
T ss_pred             CCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHH
Confidence            9999999988754432110 000000111223344557776  99999999999999999999999999998765

>KOG0269|consensus

Probab=99.97  E-value=2.6e-30  Score=194.06  Aligned_cols=191  Identities=17%  Similarity=0.266  Sum_probs=159.1

Q ss_pred             CCceEEEEeCCCeEEEEEecC--CceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRN--TKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~--~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      +.++|||++..|.|.+||+..  ..+.+..|..|+..++++.|++  ...|++|+.||+|++||++..+....+.+....
T Consensus        99 ~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSES  178 (839)
T KOG0269|consen   99 YSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSES  178 (839)
T ss_pred             hhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchh
Confidence            467899999999999999984  2566678899999999999996  567999999999999999999988888888889


Q ss_pred             eeEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         78 KNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        78 v~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      |..+.|+|. +.+|+++.+.|.+.+||++....            +...+..|.++|.++.|+|++.+||+||.|++|+|
T Consensus       179 iRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r------------~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vki  246 (839)
T KOG0269|consen  179 IRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR------------CEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKI  246 (839)
T ss_pred             hhceeeccCCCceEEEecCCceEEEeeccCchh------------HHHHhhcccCceEEEeecCCCceeeecCCCccEEE
Confidence            999999985 45799999999999999986543            23456899999999999999999999999999999


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE-EEEec--CCCeEEEEECCc
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV-LVAAN--SQGIIKIYVIPI  218 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~--~dg~i~iw~~~~  218 (221)
                      ||....+.......              ....+|..+.|-|..++ |++++  .|-.|+|||++-
T Consensus       247 Wd~t~~~~~~~~tI--------------nTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrR  297 (839)
T KOG0269|consen  247 WDMTDSRAKPKHTI--------------NTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRR  297 (839)
T ss_pred             EeccCCCccceeEE--------------eecceeeeeeeccCccchhhhhhccccceEEEEeecc
Confidence            99876543322221              23457899999997655 55555  388999999963

>KOG1332|consensus

Probab=99.97  E-value=2e-29  Score=166.42  Aligned_cols=192  Identities=20%  Similarity=0.270  Sum_probs=156.8

Q ss_pred             CceEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEe-c--CCcEEEecCCCcEEEEEcCCCcc--ceeeeccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFL-N--KEDIVSASTDSQLKLWNINKPNC--LRSFVGHI   75 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~-~--~~~l~s~~~d~~v~~wd~~~~~~--~~~~~~~~   75 (221)
                      |.+|||++.|++|+|+..++.+  +++.++.+|+++|+.++|. |  ++.|++++.||.|.||.-++++-  ......|.
T Consensus        23 gkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~  102 (299)
T KOG1332|consen   23 GKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHS  102 (299)
T ss_pred             cceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhc
Confidence            6799999999999999998665  6788999999999999997 5  67799999999999999887743  33456789


Q ss_pred             cceeEEEEeCCC--CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC---C--------
Q psy10662         76 NDKNFVGLATDG--DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD---G--------  142 (221)
Q Consensus        76 ~~v~~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~--------  142 (221)
                      ..|++++|.|.+  -.|++++.||.|.|.+.+....          ....+....|.-.+++++|.|.   |        
T Consensus       103 ~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~----------w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~  172 (299)
T KOG1332|consen  103 ASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGG----------WTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPA  172 (299)
T ss_pred             ccceeecccccccceEEEEeeCCCcEEEEEEcCCCC----------ccchhhhhccccccceeeecCcCCCccccccCcc
Confidence            999999998864  4789999999999998765411          1111234678889999999885   4        


Q ss_pred             ---CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC----cEEEEecCCCeEEEEE
Q psy10662        143 ---DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS----RVLVAANSQGIIKIYV  215 (221)
Q Consensus       143 ---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~iw~  215 (221)
                         +.|++|+.|..|+||+...+.-             .....+.+|...|+.++|.|.-    .+|++++.||++.||.
T Consensus       173 ~~~krlvSgGcDn~VkiW~~~~~~w-------------~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt  239 (299)
T KOG1332|consen  173 AKVKRLVSGGCDNLVKIWKFDSDSW-------------KLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWT  239 (299)
T ss_pred             cccceeeccCCccceeeeecCCcch-------------hhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEE
Confidence               5699999999999998765521             1222356899999999999963    5899999999999998


Q ss_pred             CC
Q psy10662        216 IP  217 (221)
Q Consensus       216 ~~  217 (221)
                      ..
T Consensus       240 ~~  241 (299)
T KOG1332|consen  240 KD  241 (299)
T ss_pred             ec
Confidence            76

>KOG0283|consensus

Probab=99.97  E-value=8.8e-29  Score=187.26  Aligned_cols=196  Identities=18%  Similarity=0.191  Sum_probs=159.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ..++|++++.|.+|++|++. ...+++.|. |.+.|+|++|+|  ++++++|+.|+.|+||++...+.+.-.. ...-|+
T Consensus       379 Kn~fLLSSSMDKTVRLWh~~-~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lIT  455 (712)
T KOG0283|consen  379 KNNFLLSSSMDKTVRLWHPG-RKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND-LRDLIT  455 (712)
T ss_pred             cCCeeEeccccccEEeecCC-CcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh-hhhhhe
Confidence            35789999999999999998 889999998 999999999997  7889999999999999998777665443 457899


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEecCCCeEEEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d  158 (221)
                      +++|.|+|++.+.|+.+|.+++|+....+....+.....+.+.    ..+. .|+.+.|.|. ...+++.+.|..|+|||
T Consensus       456 Avcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk----~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d  530 (712)
T KOG0283|consen  456 AVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKK----KQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYD  530 (712)
T ss_pred             eEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCcc----ccCc-eeeeeEecCCCCCeEEEecCCCceEEEe
Confidence            9999999999999999999999999988888776544433331    1222 7999999873 34688889999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .++...+..++            .+..... =....|+.||++|++++.|..|++|+.+.
T Consensus       531 ~~~~~lv~KfK------------G~~n~~S-Q~~Asfs~Dgk~IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  531 GRDKDLVHKFK------------GFRNTSS-QISASFSSDGKHIVSASEDSWVYIWKNDS  577 (712)
T ss_pred             ccchhhhhhhc------------ccccCCc-ceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence            97776655543            1111122 24578999999999999999999999853

>KOG0277|consensus

Probab=99.97  E-value=8.5e-30  Score=169.00  Aligned_cols=188  Identities=16%  Similarity=0.209  Sum_probs=157.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      +++.+++++.|++|++|+.. ..+.+.++.+|...|...+|+|  .+.+++++.|+++++||++.......+..|..++.
T Consensus       116 ~r~~~ltsSWD~TiKLW~~~-r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil  194 (311)
T KOG0277|consen  116 RRRIFLTSSWDGTIKLWDPN-RPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEIL  194 (311)
T ss_pred             cceeEEeeccCCceEeecCC-CCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeE
Confidence            35678888999999999997 6778899999999999999998  67799999999999999988655556888999999


Q ss_pred             EEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEecCCCeEEEE
Q psy10662         80 FVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACGSENNSLYIY  157 (221)
Q Consensus        80 ~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~  157 (221)
                      ++.|+.-. ..++||+.|+.|++||++.-+.            ++..+.+|.-.|..++|+|. ..+|++++.|=++++|
T Consensus       195 ~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~------------pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw  262 (311)
T KOG0277|consen  195 CCDWSKYNHNVLATGGVDNLVRGWDIRNLRT------------PLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIW  262 (311)
T ss_pred             eecccccCCcEEEecCCCceEEEEehhhccc------------cceeecCCceEEEEEecCcchhhHhhhccccceEEec
Confidence            99998754 4689999999999999986542            23456899999999999995 4588999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEEC
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~  216 (221)
                      |.......              +.....|+..+..+.|++ ++.++|+.+.|+.++||+.
T Consensus       263 ~~~~~ds~--------------~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  263 DPERQDSA--------------IETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             ccccchhh--------------hhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            97643321              122346888999999998 6789999999999999984

>KOG0264|consensus

Probab=99.97  E-value=3.6e-29  Score=177.54  Aligned_cols=192  Identities=17%  Similarity=0.208  Sum_probs=155.2

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc---------eeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCc----
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK---------EALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPN----   66 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~---------~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~----   66 (221)
                      +..++|+++..+.|.|||..+..         .+-..+.+|.+.-.+++|++  .+.|++++.|++|++||+....    
T Consensus       136 np~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~  215 (422)
T KOG0264|consen  136 NPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDK  215 (422)
T ss_pred             CCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCc
Confidence            45688889999999999987321         12237888998888999996  5779999999999999996532    


Q ss_pred             ---cceeeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-C
Q psy10662         67 ---CLRSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-D  141 (221)
Q Consensus        67 ---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~  141 (221)
                         +...+.+|...|..++|++... +|++++.|+.+.|||+++++.           .......+|...+.|++|+| +
T Consensus       216 ~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~-----------~~~~~~~ah~~~vn~~~fnp~~  284 (422)
T KOG0264|consen  216 VVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTS-----------KPSHSVKAHSAEVNCVAFNPFN  284 (422)
T ss_pred             cccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCC-----------CCcccccccCCceeEEEeCCCC
Confidence               2345688999999999998654 689999999999999995211           11233578999999999999 6


Q ss_pred             CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC-CcEEEEecCCCeEEEEECCc
Q psy10662        142 GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       142 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +..||+|+.|++|++||++....              ++..+.+|...|..+.|+|+ ...|++++.|+.+.+||+..
T Consensus       285 ~~ilAT~S~D~tV~LwDlRnL~~--------------~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~  348 (422)
T KOG0264|consen  285 EFILATGSADKTVALWDLRNLNK--------------PLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSR  348 (422)
T ss_pred             CceEEeccCCCcEEEeechhccc--------------CceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence            66889999999999999975432              45566789999999999996 56788888999999999863

>KOG0267|consensus

Probab=99.97  E-value=6.8e-31  Score=196.00  Aligned_cols=188  Identities=21%  Similarity=0.402  Sum_probs=169.4

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      ++.+++|+.|..+-+|.+. .-..+..+.+|..+|.++.|++ ...|++|+.+|+|++||++.++.++.+.+|...+.++
T Consensus        40 ~r~~~~Gg~~~k~~L~~i~-kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv  118 (825)
T KOG0267|consen   40 SRSLVTGGEDEKVNLWAIG-KPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSV  118 (825)
T ss_pred             ceeeccCCCceeecccccc-CCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCccee
Confidence            5678999999999999987 4455566899999999999996 5668899999999999999999999999999999999


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      +|+|-+.++++|+.|..+++||++...+.+.+             .+|...+..++|+|+|++++.|++|..+++||+..
T Consensus       119 ~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~-------------~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~a  185 (825)
T KOG0267|consen  119 DFHPYGEFFASGSTDTDLKIWDIRKKGCSHTY-------------KSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTA  185 (825)
T ss_pred             eeccceEEeccccccccceehhhhccCceeee-------------cCCcceeEEEeecCCCceeeccCCcceeeeecccc
Confidence            99999999999999999999999977776654             67888999999999999999999999999999998


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++....|.               .|+..+..+.|+|..-++++|+.|+++++||+++-
T Consensus       186 gk~~~ef~---------------~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletf  228 (825)
T KOG0267|consen  186 GKLSKEFK---------------SHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETF  228 (825)
T ss_pred             cccccccc---------------cccccccccccCchhhhhccCCCCceeeeecccee
Confidence            88776664               78889999999999999999999999999999853

>KOG0973|consensus

Probab=99.97  E-value=1.6e-28  Score=190.31  Aligned_cols=206  Identities=19%  Similarity=0.297  Sum_probs=169.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecC-----------------CceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN-----------------TKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNI   62 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~-----------------~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~   62 (221)
                      |||++||+|+.|+.|.||+...                 .-+....+.+|...|..++|+| +.+|++++.|++|.+|+.
T Consensus        79 ~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~  158 (942)
T KOG0973|consen   79 PDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNA  158 (942)
T ss_pred             CCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEcc
Confidence            6999999999999999999872                 0146778899999999999998 556999999999999999


Q ss_pred             CCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE----------------e-----------
Q psy10662         63 NKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR----------------F-----------  115 (221)
Q Consensus        63 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------------~-----------  115 (221)
                      ++.+.+..+.+|.+.|..+.|.|-|+|||+-+.|++|++|.+......+.+.                |           
T Consensus       159 ~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~n  238 (942)
T KOG0973|consen  159 KTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPN  238 (942)
T ss_pred             ccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchh
Confidence            9999999999999999999999999999999999999999976544433332                1           


Q ss_pred             ------------ecccceeEeeEEEeeCceEEEEEec-----CCC------------EEEEecCCCeEEEEEcCCCCcee
Q psy10662        116 ------------DTVRSMLESSFVGHINDKNFVGLAT-----DGD------------YVACGSENNSLYIYYKGLSKHMH  166 (221)
Q Consensus       116 ------------~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~------------~l~~~~~d~~i~~~d~~~~~~~~  166 (221)
                                  +.........+-+|..++.+++|+|     ..+            .+|+|+.|+.|.||.....+++.
T Consensus       239 A~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~  318 (942)
T KOG0973|consen  239 AVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLF  318 (942)
T ss_pred             hccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchh
Confidence                        1222333456789999999999998     111            68899999999999976655543


Q ss_pred             eeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        167 AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ...              .-....|.+++|+|||..|+++|.||+|.+..++.++
T Consensus       319 vi~--------------~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~E  358 (942)
T KOG0973|consen  319 VIH--------------NLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKE  358 (942)
T ss_pred             hhh--------------hhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence            331              1235579999999999999999999999999988654

>KOG0288|consensus

Probab=99.97  E-value=3.3e-30  Score=181.12  Aligned_cols=209  Identities=16%  Similarity=0.246  Sum_probs=171.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      ++...|++|+.|..|++|+....+ ....++.+..++|+++.|. ++.++++++.|+.+++|++...+...++.+|.+.|
T Consensus       185 ~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkV  264 (459)
T KOG0288|consen  185 RNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKV  264 (459)
T ss_pred             cCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccce
Confidence            355789999999999999987222 3567788888999999998 46679999999999999999999999999999999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------------eecccceeEeeEEEeeCc
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------FDTVRSMLESSFVGHIND  132 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~  132 (221)
                      +++.|......+++|+.|.+|++||+....+.+++-                          |+.....+....+.+ +.
T Consensus       265 t~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g-g~  343 (459)
T KOG0288|consen  265 TAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLG-GR  343 (459)
T ss_pred             eeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeecccccceEEEeccCCceeeEeecC-cc
Confidence            999998766669999999999999998776655442                          333333344444433 48


Q ss_pred             eEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEE
Q psy10662        133 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIK  212 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  212 (221)
                      |+++..++++..+.+++.|..+.+.|+++.+....+......         .++  ..+.+.|||++.|+++||.||.|+
T Consensus       344 vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k---------~as--DwtrvvfSpd~~YvaAGS~dgsv~  412 (459)
T KOG0288|consen  344 VTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFK---------CAS--DWTRVVFSPDGSYVAAGSADGSVY  412 (459)
T ss_pred             eeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccc---------ccc--ccceeEECCCCceeeeccCCCcEE
Confidence            999999999999999999999999999999887777532211         122  378899999999999999999999


Q ss_pred             EEECCcccC
Q psy10662        213 IYVIPIRVL  221 (221)
Q Consensus       213 iw~~~~~~l  221 (221)
                      ||++.++++
T Consensus       413 iW~v~tgKl  421 (459)
T KOG0288|consen  413 IWSVFTGKL  421 (459)
T ss_pred             EEEccCceE
Confidence            999999875

>KOG0275|consensus

Probab=99.97  E-value=4.1e-30  Score=176.61  Aligned_cols=198  Identities=21%  Similarity=0.339  Sum_probs=169.6

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEE-eccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFK-GHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |...||+|+.||.|++|.+. ++.+++.|. +|...|+|+.|+. +..+++++.|.++++.-+.++++++.+++|.+.|+
T Consensus       274 DsEMlAsGsqDGkIKvWri~-tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn  352 (508)
T KOG0275|consen  274 DSEMLASGSQDGKIKVWRIE-TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVN  352 (508)
T ss_pred             cHHHhhccCcCCcEEEEEEe-cchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCcccccc
Confidence            56789999999999999998 899998886 8999999999994 67799999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEee-------------------------------cccceeEeeEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD-------------------------------TVRSMLESSFVG  128 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~  128 (221)
                      ...|.++|.++++++.||+|++|+..+.+++.+++.-                               ...++.++.+..
T Consensus       353 ~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsS  432 (508)
T KOG0275|consen  353 EATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSS  432 (508)
T ss_pred             ceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeecc
Confidence            9999999999999999999999999999888777510                               011222233321


Q ss_pred             ---eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662        129 ---HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       129 ---~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                         ..+...++..+|.|.++.+.++|+.++.|...+++....+.               .|+..+..++-+|..++|++-
T Consensus       433 GkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~---------------VhEkdvIGl~HHPHqNllAsY  497 (508)
T KOG0275|consen  433 GKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLP---------------VHEKDVIGLTHHPHQNLLASY  497 (508)
T ss_pred             CCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeee---------------cccccccccccCcccchhhhh
Confidence               12345567789999999999999999999999888776664               577778899999999999999


Q ss_pred             cCCCeEEEEE
Q psy10662        206 NSQGIIKIYV  215 (221)
Q Consensus       206 ~~dg~i~iw~  215 (221)
                      +.||.+++|.
T Consensus       498 sEDgllKLWk  507 (508)
T KOG0275|consen  498 SEDGLLKLWK  507 (508)
T ss_pred             cccchhhhcC
Confidence            9999999995

>KOG0274|consensus

Probab=99.97  E-value=1.2e-28  Score=187.09  Aligned_cols=183  Identities=21%  Similarity=0.341  Sum_probs=161.5

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG   82 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~   82 (221)
                      +..|++|+.|.++++||.. ++++..++.+|.+.|.++...+ ..+++|+.|.+|++|+++++..+..+.+|..+|+++.
T Consensus       261 ~~~lvsgS~D~t~rvWd~~-sg~C~~~l~gh~stv~~~~~~~-~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~  338 (537)
T KOG0274|consen  261 GDKLVSGSTDKTERVWDCS-TGECTHSLQGHTSSVRCLTIDP-FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQ  338 (537)
T ss_pred             CCEEEEEecCCcEEeEecC-CCcEEEEecCCCceEEEEEccC-ceEeeccCCceEEEEeccCcceEEEeccccccEEEEE
Confidence            6789999999999999987 8999999999999999987653 4577889999999999999999999988999999999


Q ss_pred             EeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC
Q psy10662         83 LATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS  162 (221)
Q Consensus        83 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~  162 (221)
                      .+  +.++++|+.|++|++||+.++++++.+             .+|...|+++.+.+. ..+++|+.|+.|++||+++.
T Consensus       339 ~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl-------------~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~  402 (537)
T KOG0274|consen  339 LD--EPLLVSGSYDGTVKVWDPRTGKCLKSL-------------SGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTK  402 (537)
T ss_pred             ec--CCEEEEEecCceEEEEEhhhceeeeee-------------cCCcceEEEEEecCc-ceEEeeeeccceEeecCCch
Confidence            97  789999999999999999988887764             889999999988775 79999999999999999887


Q ss_pred             -CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        163 -KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       163 -~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                       +++..+               .+|..-+..+.+  .++.|++++.|+.|++||..+++
T Consensus       403 ~~c~~tl---------------~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~  444 (537)
T KOG0274|consen  403 RKCIHTL---------------QGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGE  444 (537)
T ss_pred             hhhhhhh---------------cCCccccccccc--ccceeEeccccccEEEeecccCc
Confidence             555444               477777766554  67899999999999999998765

>KOG0647|consensus

Probab=99.97  E-value=5.4e-28  Score=164.01  Aligned_cols=213  Identities=19%  Similarity=0.214  Sum_probs=161.2

Q ss_pred             CCceEEEEeCCCeEEEEEecCCcee-eEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEA-LAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ...+++.++.||+||+|++...+.. -+....|.++|.+++|+. +..+++|+.|+.+++||+.+++. ..+..|.++|.
T Consensus        39 ~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~-~~v~~Hd~pvk  117 (347)
T KOG0647|consen   39 ADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV-SQVAAHDAPVK  117 (347)
T ss_pred             cCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCe-eeeeeccccee
Confidence            3467889999999999999864432 245567999999999996 56699999999999999999955 45667999999


Q ss_pred             EEEEeCCCC--EEEEecCCCeEEEEECCCCeeeEEEEeec-------cc----------ceeEeeE-----------EEe
Q psy10662         80 FVGLATDGD--YVACGSENNSLYIYYKGLSKHMHAYRFDT-------VR----------SMLESSF-----------VGH  129 (221)
Q Consensus        80 ~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-------~~----------~~~~~~~-----------~~~  129 (221)
                      .+.|-+...  .|++|+.|.+|+.||++..+++.+++...       ..          ...+..+           ...
T Consensus       118 t~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpL  197 (347)
T KOG0647|consen  118 TCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPL  197 (347)
T ss_pred             EEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcc
Confidence            999987666  79999999999999999999888776211       11          1111111           112


Q ss_pred             eCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC
Q psy10662        130 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG  209 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  209 (221)
                      .-.+.+++..++....+.|+-+|.+.+..+..+.+...+.|...+....    ..+.--.|++++|+|....|++++.||
T Consensus       198 k~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~----~~~~VYaVNsi~FhP~hgtlvTaGsDG  273 (347)
T KOG0647|consen  198 KWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS----VNDDVYAVNSIAFHPVHGTLVTAGSDG  273 (347)
T ss_pred             cceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCC----CCCceEEecceEeecccceEEEecCCc
Confidence            3457889998888888999999999999998874444444433222111    001224689999999999999999999


Q ss_pred             eEEEEECCcc
Q psy10662        210 IIKIYVIPIR  219 (221)
Q Consensus       210 ~i~iw~~~~~  219 (221)
                      ++.+||-+.+
T Consensus       274 tf~FWDkdar  283 (347)
T KOG0647|consen  274 TFSFWDKDAR  283 (347)
T ss_pred             eEEEecchhh
Confidence            9999997654

>KOG4283|consensus

Probab=99.96  E-value=2.8e-28  Score=165.29  Aligned_cols=204  Identities=16%  Similarity=0.223  Sum_probs=164.6

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc---------eeeE-----EEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCC
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK---------EALA-----VFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKP   65 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~---------~~~~-----~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~   65 (221)
                      .|+++++|+.||.|.+||+++..         +.+.     .-.+|+-.|.++.|-|  .+.+.+++.|.++++||..+.
T Consensus        55 egrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTl  134 (397)
T KOG4283|consen   55 EGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTL  134 (397)
T ss_pred             cceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccc
Confidence            47899999999999999998432         0111     1135778899999987  677889999999999999999


Q ss_pred             ccceeeeccccceeEEEEeCCC---CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         66 NCLRSFVGHINDKNFVGLATDG---DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        66 ~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                      +....|+ .++.|++-+++|=.   -++|+|..+-.|++.|+.++..-.+             +.+|...|.++.|+|..
T Consensus       135 Q~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~-------------LsGHr~~vlaV~Wsp~~  200 (397)
T KOG4283|consen  135 QEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHT-------------LSGHRDGVLAVEWSPSS  200 (397)
T ss_pred             eeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceee-------------eccccCceEEEEeccCc
Confidence            8887775 56778888888743   3688888999999999998877655             58999999999999987


Q ss_pred             CE-EEEecCCCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        143 DY-VACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       143 ~~-l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+ |++|+.||.|++||++.. .+...++.+.. ...........|.+.|+.++|+.++.++++.+.|..+++|+..+|.
T Consensus       201 e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~-k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~  279 (397)
T KOG4283|consen  201 EWVLATGSADGAIRLWDIRRASGCFRVLDQHNT-KRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR  279 (397)
T ss_pred             eeEEEecCCCceEEEEEeecccceeEEeecccC-ccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence            75 688999999999999876 55555553332 2233333456899999999999999999999999999999998764

>KOG0299|consensus

Probab=99.96  E-value=2.9e-28  Score=173.46  Aligned_cols=200  Identities=22%  Similarity=0.317  Sum_probs=167.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |||++||+|+.|..|.||+.. +.+.++.+.+|.+.|.+++|-. ...|++++.|+.+++|++.....+.++.+|.+.|.
T Consensus       212 ~Dgkylatgg~d~~v~Iw~~~-t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~  290 (479)
T KOG0299|consen  212 SDGKYLATGGRDRHVQIWDCD-TLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVL  290 (479)
T ss_pred             CCCcEEEecCCCceEEEecCc-ccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCcccee
Confidence            689999999999999999998 8899999999999999999985 46699999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      .+....-++.+-+|+.|+++++|++.....+              .+.++.+.+-|++|-.+ ..+++|+.+|.|.+|++
T Consensus       291 ~IdaL~reR~vtVGgrDrT~rlwKi~eesql--------------ifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~  355 (479)
T KOG0299|consen  291 GIDALSRERCVTVGGRDRTVRLWKIPEESQL--------------IFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSL  355 (479)
T ss_pred             eechhcccceEEeccccceeEEEecccccee--------------eeeCCCCCeeeEEEecc-cceeeccCCceEEEeee
Confidence            9988877777777789999999998433221              24677889999999754 57899999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ...++++.......-...  . ....+..+|++++..|...++++|+.+|.|++|.+..+
T Consensus       356 ~KKkplf~~~~AHgv~~~--~-~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g  412 (479)
T KOG0299|consen  356 LKKKPLFTSRLAHGVIPE--L-DPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDG  412 (479)
T ss_pred             cccCceeEeeccccccCC--c-cccccccceeeeEecccCceEEecCCCCceEEEEecCC
Confidence            999988877532211111  0 11123469999999999999999999999999999876

>KOG0772|consensus

Probab=99.96  E-value=8.9e-29  Score=178.68  Aligned_cols=199  Identities=16%  Similarity=0.205  Sum_probs=149.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEE---E-eccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccc-------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVF---K-GHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCL-------   68 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~---~-~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~-------   68 (221)
                      |.|-+|++|+.|..|++||+......++.+   . .....|.+++|++ ++.|++.+.....+++|-...+.+       
T Consensus       177 p~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQ  256 (641)
T KOG0772|consen  177 PSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQ  256 (641)
T ss_pred             CCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccch
Confidence            678899999999999999997433222222   2 2345799999996 677888888899999996443222       


Q ss_pred             -----eeeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         69 -----RSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        69 -----~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                           ...++|...++|.+|+|..+ .+++++.||++++||+...+.....       ...+...+..-.++.++|+|+|
T Consensus       257 YI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qV-------ik~k~~~g~Rv~~tsC~~nrdg  329 (641)
T KOG0772|consen  257 YIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQV-------IKTKPAGGKRVPVTSCAWNRDG  329 (641)
T ss_pred             hhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeE-------EeeccCCCcccCceeeecCCCc
Confidence                 22358889999999999765 6899999999999999766543322       0011112445578999999999


Q ss_pred             CEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccc--ceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        143 DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNE--FVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++||+|+.||.|.+|+.........+.            ....|..  .|+++.||+||++|++-+.|+++++||++.
T Consensus       330 ~~iAagc~DGSIQ~W~~~~~~v~p~~~------------vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq  395 (641)
T KOG0772|consen  330 KLIAAGCLDGSIQIWDKGSRTVRPVMK------------VKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQ  395 (641)
T ss_pred             chhhhcccCCceeeeecCCcccccceE------------eeeccCCCCceeEEEeccccchhhhccCCCceeeeeccc
Confidence            999999999999999975433221111            1124554  899999999999999999999999999975

>KOG0274|consensus

Probab=99.96  E-value=8.8e-28  Score=182.34  Aligned_cols=183  Identities=19%  Similarity=0.309  Sum_probs=163.0

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEE-EEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAV-FKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      ..++++++.+++|++|+.. ++..+.. +.+|.+.|+++++.. ++.|++|+.|.++++||..++++...+.+|.+.+.+
T Consensus       218 ~~~~~~~s~~~tl~~~~~~-~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~  296 (537)
T KOG0274|consen  218 DGFFKSGSDDSTLHLWDLN-NGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRC  296 (537)
T ss_pred             cCeEEecCCCceeEEeecc-cceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEE
Confidence            4678899999999999998 5555555 999999999999985 778999999999999999999999999999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      +...+  .++++|+.|.+|++|++.++..+..+             .+|..+|.++..+  +.++++|+.|+.|++||..
T Consensus       297 ~~~~~--~~~~sgs~D~tVkVW~v~n~~~l~l~-------------~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~  359 (537)
T KOG0274|consen  297 LTIDP--FLLVSGSRDNTVKVWDVTNGACLNLL-------------RGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR  359 (537)
T ss_pred             EEccC--ceEeeccCCceEEEEeccCcceEEEe-------------ccccccEEEEEec--CCEEEEEecCceEEEEEhh
Confidence            88754  47888999999999999988887664             6699999999988  7799999999999999999


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      +++++..+.               +|...|.++.+.+. ..+++|+.|+.|++||++++
T Consensus       360 ~~~cl~sl~---------------gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~  402 (537)
T KOG0274|consen  360 TGKCLKSLS---------------GHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTK  402 (537)
T ss_pred             hceeeeeec---------------CCcceEEEEEecCc-ceEEeeeeccceEeecCCch
Confidence            888776664               89999999988665 89999999999999999876

>KOG0302|consensus

Probab=99.96  E-value=3e-28  Score=169.74  Aligned_cols=194  Identities=19%  Similarity=0.235  Sum_probs=159.3

Q ss_pred             CCceEEEEeCCCeEEEEEecC---------------CceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCC
Q psy10662          2 NSCHLAFGSADHCVHYYDLRN---------------TKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINK   64 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~---------------~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~   64 (221)
                      +..+.|+-+..|.|+||++..               ..+++.++.+|.+.=+.|.|+|  .+.|++|..-+.|++|...+
T Consensus       164 ~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~  243 (440)
T KOG0302|consen  164 NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPST  243 (440)
T ss_pred             CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeecc
Confidence            345678888899999999862               2357788899999999999998  57799999999999999988


Q ss_pred             Cccc---eeeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         65 PNCL---RSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        65 ~~~~---~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                      +.-.   ..+.+|...|-.++|+|..+ .|++|+-||+|+|||++.+.....+           ..+.|.+.|+.+.|+.
T Consensus       244 g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~-----------~~kAh~sDVNVISWnr  312 (440)
T KOG0302|consen  244 GSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAV-----------STKAHNSDVNVISWNR  312 (440)
T ss_pred             CceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcccee-----------EeeccCCceeeEEccC
Confidence            6432   23567999999999999765 7899999999999999988544332           2378999999999999


Q ss_pred             CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC-CcEEEEecCCCeEEEEECCc
Q psy10662        141 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       141 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .-.+||+|+.||.++|||+++-+.-            .++..+..|..+|+++.|+|. ...|++++.|.+|.+||+..
T Consensus       313 ~~~lLasG~DdGt~~iwDLR~~~~~------------~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsv  379 (440)
T KOG0302|consen  313 REPLLASGGDDGTLSIWDLRQFKSG------------QPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSV  379 (440)
T ss_pred             CcceeeecCCCceEEEEEhhhccCC------------CcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence            8889999999999999999865432            233344578999999999995 56788888999999999863

>KOG0306|consensus

Probab=99.96  E-value=1.2e-27  Score=179.59  Aligned_cols=189  Identities=13%  Similarity=0.183  Sum_probs=162.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCC----c---eee-----EEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCcc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNT----K---EAL-----AVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNC   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~----~---~~~-----~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~   67 (221)
                      ||+..+++|+.|.+|++||..-.    +   +.+     ++++ -.+.|.|++++|++. |+.+-.|.+|++|-+.+.+.
T Consensus       464 pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLe-l~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKF  542 (888)
T KOG0306|consen  464 PDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLE-LEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKF  542 (888)
T ss_pred             CCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEe-ccccEEEEEEcCCCcEEEEEeccCeEEEEEecceee
Confidence            78999999999999999998511    1   111     1222 357899999998655 66777799999999999999


Q ss_pred             ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         68 LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                      ..++.+|.-||.|+.++||+++++|||.|..|++|-+.-|.+-+.             +.+|...|.++.|.|....+.+
T Consensus       543 flsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS-------------~fAHdDSvm~V~F~P~~~~FFt  609 (888)
T KOG0306|consen  543 FLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKS-------------FFAHDDSVMSVQFLPKTHLFFT  609 (888)
T ss_pred             eeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhh-------------hhcccCceeEEEEcccceeEEE
Confidence            999999999999999999999999999999999998887776554             5899999999999999999999


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++.|+.|+-||-..-+.++               .+.+|...|++++.+|+|.+++++|.|..|++|+-..
T Consensus       610 ~gKD~kvKqWDg~kFe~iq---------------~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td  665 (888)
T KOG0306|consen  610 CGKDGKVKQWDGEKFEEIQ---------------KLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD  665 (888)
T ss_pred             ecCcceEEeechhhhhhhe---------------eeccchheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence            9999999999965555444               4458999999999999999999999999999998654

>KOG0289|consensus

Probab=99.96  E-value=1.9e-27  Score=168.50  Aligned_cols=188  Identities=16%  Similarity=0.198  Sum_probs=159.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeec--cccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVG--HIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~--~~~~   77 (221)
                      |+...+++++.|-.|+||... ..........|..+|+.+..+| +.+|++++.|++..+.|++++..+.....  ..-.
T Consensus       271 ~~~~~v~~aSad~~i~vws~~-~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~  349 (506)
T KOG0289|consen  271 KDLDTVITASADEIIRVWSVP-LSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVE  349 (506)
T ss_pred             cchhheeecCCcceEEeeccc-cccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccce
Confidence            455678899999999999997 5556677788999999999997 67899999999999999999988765542  2235


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      +++.+|+|||.+|.+|..|+.|+|||+.++..+..             |.+|.++|..++|+.+|.+|+++++|+.|++|
T Consensus       350 ~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~-------------Fpght~~vk~i~FsENGY~Lat~add~~V~lw  416 (506)
T KOG0289|consen  350 YTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAK-------------FPGHTGPVKAISFSENGYWLATAADDGSVKLW  416 (506)
T ss_pred             eEEeeEcCCceEEeccCCCceEEEEEcCCcccccc-------------CCCCCCceeEEEeccCceEEEEEecCCeEEEE
Confidence            89999999999999999999999999988776554             58999999999999999999999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      |++..+....+..+              ....+.+++|.+.|.+|+.++.|=+|+++.-
T Consensus       417 DLRKl~n~kt~~l~--------------~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k  461 (506)
T KOG0289|consen  417 DLRKLKNFKTIQLD--------------EKKEVNSLSFDQSGTYLGIAGSDLQVYICKK  461 (506)
T ss_pred             Eehhhcccceeecc--------------ccccceeEEEcCCCCeEEeecceeEEEEEec
Confidence            99988766666432              1236899999999999999988877777663

>KOG0268|consensus

Probab=99.96  E-value=3.1e-28  Score=168.94  Aligned_cols=198  Identities=18%  Similarity=0.264  Sum_probs=155.0

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCC------------------
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP------------------   65 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~------------------   65 (221)
                      ..+++|+.||.|+|||+. ...+..++++|.+.|..|++.. +.+++++.|.+|+.|.+...                  
T Consensus        80 s~~aSGs~DG~VkiWnls-qR~~~~~f~AH~G~V~Gi~v~~-~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~  157 (433)
T KOG0268|consen   80 STVASGSCDGEVKIWNLS-QRECIRTFKAHEGLVRGICVTQ-TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHR  157 (433)
T ss_pred             hhhhccccCceEEEEehh-hhhhhheeecccCceeeEEecc-cceEEecCCcceeeeeccCCcceeeecccccccccccc
Confidence            468999999999999998 7888999999999999999987 67899999999999974321                  


Q ss_pred             --------------------ccceeeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEE---------e
Q psy10662         66 --------------------NCLRSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYR---------F  115 (221)
Q Consensus        66 --------------------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~---------~  115 (221)
                                          .++..+.-....|.++.|+|-.. .|++++.|+.|.+||+++.++++.+.         |
T Consensus       158 ~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~Isw  237 (433)
T KOG0268|consen  158 KNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICW  237 (433)
T ss_pred             ccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceec
Confidence                                12222222234577888888665 56788899999999999998887654         2


Q ss_pred             eccc--------------------ceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccc
Q psy10662        116 DTVR--------------------SMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS  175 (221)
Q Consensus       116 ~~~~--------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~  175 (221)
                      ++..                    ..++....+|.+.|..++|+|.|+-+++|+.|.+|+||..+.+.....+-      
T Consensus       238 nPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYh------  311 (433)
T KOG0268|consen  238 NPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYH------  311 (433)
T ss_pred             CccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhh------
Confidence            2211                    12234456788899999999999999999999999999987665433321      


Q ss_pred             cccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        176 MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                              ....+.|.++.||.|.+++++||.|+.|++|.-.
T Consensus       312 --------tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~  345 (433)
T KOG0268|consen  312 --------TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAK  345 (433)
T ss_pred             --------HhhhheeeEEEEeccccEEEecCCCcceeeeecc
Confidence                    1123568999999999999999999999999865

>KOG1036|consensus

Probab=99.96  E-value=5.6e-27  Score=159.37  Aligned_cols=211  Identities=17%  Similarity=0.179  Sum_probs=157.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      |.++.|++++.||.+++|++. .......++ |..++.+++|.+...+++|+.||.|+.+|+.+++... +..|..++.|
T Consensus        23 ~~~~~LLvssWDgslrlYdv~-~~~l~~~~~-~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~-igth~~~i~c   99 (323)
T KOG1036|consen   23 PSSSDLLVSSWDGSLRLYDVP-ANSLKLKFK-HGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQ-IGTHDEGIRC   99 (323)
T ss_pred             CcCCcEEEEeccCcEEEEecc-chhhhhhee-cCCceeeeeccCCceEEEeccCceEEEEEecCCccee-eccCCCceEE
Confidence            456778888899999999998 555555565 9999999999999999999999999999998876654 4569999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCee---------eEEEE-----------------eecccceeEe--eEEEeeCc
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKH---------MHAYR-----------------FDTVRSMLES--SFVGHIND  132 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~---------~~~~~-----------------~~~~~~~~~~--~~~~~~~~  132 (221)
                      +.+.+....+++|+.|++|++||.+....         +....                 |+.++.....  .-....-.
T Consensus       100 i~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyq  179 (323)
T KOG1036|consen  100 IEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQ  179 (323)
T ss_pred             EEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeE
Confidence            99999888999999999999999884322         22221                 1111111100  01123446


Q ss_pred             eEEEEEecCCCEEEEecCCCeEEEEEcCCC----CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        133 KNFVGLATDGDYVACGSENNSLYIYYKGLS----KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      +.++++-|++.-.++++-||.|.+=.++..    +..+.++.+.....-      ...--+|++++|+|-...|+||+.|
T Consensus       180 tR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~------~~~~yPVNai~Fhp~~~tfaTgGsD  253 (323)
T KOG1036|consen  180 TRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKD------TEIIYPVNAIAFHPIHGTFATGGSD  253 (323)
T ss_pred             EEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCC------ceEEEEeceeEeccccceEEecCCC
Confidence            789999998888999999999998766655    223334333221111      0123479999999999999999999


Q ss_pred             CeEEEEECCccc
Q psy10662        209 GIIKIYVIPIRV  220 (221)
Q Consensus       209 g~i~iw~~~~~~  220 (221)
                      |.|.+||+.+++
T Consensus       254 G~V~~Wd~~~rK  265 (323)
T KOG1036|consen  254 GIVNIWDLFNRK  265 (323)
T ss_pred             ceEEEccCcchh
Confidence            999999998765

>KOG0308|consensus

Probab=99.96  E-value=2.7e-27  Score=175.12  Aligned_cols=189  Identities=17%  Similarity=0.256  Sum_probs=165.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEE-ec-CCcEEEecCCCcEEEEEcCCCc--cc--------
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKF-LN-KEDIVSASTDSQLKLWNINKPN--CL--------   68 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~-~~-~~~l~s~~~d~~v~~wd~~~~~--~~--------   68 (221)
                      +++.|++++.|-+|++|+..... -++.++..|++.|.|+++ .+ ...+++|+.|+.|.+||++++.  .+        
T Consensus        84 ~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~  163 (735)
T KOG0308|consen   84 NGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTV  163 (735)
T ss_pred             CCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccccc
Confidence            56789999999999999998443 577889999999999999 44 4558899999999999998762  22        


Q ss_pred             eeee-ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         69 RSFV-GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        69 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                      ..+. ++...|++++.++.|..+++|+.++.+++||.++.+.+..+             .+|...|.++..++||+.+++
T Consensus       164 ~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkL-------------rGHTdNVr~ll~~dDGt~~ls  230 (735)
T KOG0308|consen  164 NSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKL-------------RGHTDNVRVLLVNDDGTRLLS  230 (735)
T ss_pred             ccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeee-------------eccccceEEEEEcCCCCeEee
Confidence            2232 77889999999999999999999999999999988887654             799999999999999999999


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++.||+|++||+....++.++.               .|...|.++..+|+=..+++|+.||.|..=|+.+
T Consensus       231 ~sSDgtIrlWdLgqQrCl~T~~---------------vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n  286 (735)
T KOG0308|consen  231 ASSDGTIRLWDLGQQRCLATYI---------------VHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRN  286 (735)
T ss_pred             cCCCceEEeeeccccceeeeEE---------------eccCceEEEeeCCCcceEEecCCCCcEEecccCC
Confidence            9999999999999988887765               5777899999999999999999999999888765

>KOG0643|consensus

Probab=99.96  E-value=5.3e-27  Score=156.88  Aligned_cols=177  Identities=13%  Similarity=0.217  Sum_probs=152.7

Q ss_pred             EEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCC
Q psy10662         29 VFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS  107 (221)
Q Consensus        29 ~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~  107 (221)
                      .+++|+.+++.+.|+ .+..|++|+.|.+..+|--.+++.+.++.+|.+.|+|++.+-+.+++++|+.|.++++||+.++
T Consensus         5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG   84 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG   84 (327)
T ss_pred             ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence            467899999999999 5778999999999999998899999999999999999999999999999999999999999999


Q ss_pred             eeeEEEEe---------------------------------ecc-------cceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662        108 KHMHAYRF---------------------------------DTV-------RSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus       108 ~~~~~~~~---------------------------------~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                      +.+..+..                                 +.+       ...+...+..+...++.+-|.|-+++|++
T Consensus        85 k~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~  164 (327)
T KOG0643|consen   85 KQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIA  164 (327)
T ss_pred             cEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEE
Confidence            99888761                                 111       22334445566788899999999999999


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      |.+||.|..||++++.....              ....|...|+.++++||..++++++.|.+-++||+.+-
T Consensus       165 Ghe~G~is~~da~~g~~~v~--------------s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl  222 (327)
T KOG0643|consen  165 GHEDGSISIYDARTGKELVD--------------SDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL  222 (327)
T ss_pred             ecCCCcEEEEEcccCceeee--------------chhhhccccccccccCCcceEEecccCccceeeeccce
Confidence            99999999999998754321              12357889999999999999999999999999999764

>KOG0288|consensus

Probab=99.96  E-value=6.6e-28  Score=169.67  Aligned_cols=198  Identities=20%  Similarity=0.335  Sum_probs=146.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      +++.++++++.|+.+++|++. ..+...++.+|.+.|+++.|.-+ ..+++|+.|.+|+.||+....+.+++. ....+.
T Consensus       229 ~~~~~~iAas~d~~~r~Wnvd-~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cn  306 (459)
T KOG0288|consen  229 SDNKHVIAASNDKNLRLWNVD-SLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCN  306 (459)
T ss_pred             CCCceEEeecCCCceeeeecc-chhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-cccccc
Confidence            467889999999999999998 78889999999999999999854 349999999999999998876665543 223344


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE----------------------------eecccceeEeeEEE---
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR----------------------------FDTVRSMLESSFVG---  128 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~---  128 (221)
                      .+..+  ...+++|-.|+.|++||.++..+.....                            ++.........+..   
T Consensus       307 DI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~  384 (459)
T KOG0288|consen  307 DIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGF  384 (459)
T ss_pred             ceEec--ceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccc
Confidence            44443  3346666666667777766665555443                            11111111111111   


Q ss_pred             -eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        129 -HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       129 -~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                       .....+.+.|||++.|+++|+.||.|+||++.+++....+...             .....|++++|+|.|..|++++.
T Consensus       385 k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s-------------~s~~aI~s~~W~~sG~~Llsadk  451 (459)
T KOG0288|consen  385 KCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLS-------------TSNAAITSLSWNPSGSGLLSADK  451 (459)
T ss_pred             ccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccC-------------CCCcceEEEEEcCCCchhhcccC
Confidence             1233678899999999999999999999999999887766421             12237999999999999999999


Q ss_pred             CCeEEEEE
Q psy10662        208 QGIIKIYV  215 (221)
Q Consensus       208 dg~i~iw~  215 (221)
                      ++.+.+|.
T Consensus       452 ~~~v~lW~  459 (459)
T KOG0288|consen  452 QKAVTLWT  459 (459)
T ss_pred             CcceEecC
Confidence            99999993

>KOG1539|consensus

Probab=99.96  E-value=3e-26  Score=173.74  Aligned_cols=217  Identities=14%  Similarity=0.206  Sum_probs=175.3

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG   82 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~   82 (221)
                      +.++.|+.+|.+.+|+++ +++.+.+++++.+.|+++.-+| =..++.|..+|+|.+++++.++.+.+++...++|++++
T Consensus       173 NKIvvGs~~G~lql~Nvr-t~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslS  251 (910)
T KOG1539|consen  173 NKIVVGSSQGRLQLWNVR-TGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLS  251 (910)
T ss_pred             eeEEEeecCCcEEEEEec-cCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEE
Confidence            457899999999999998 8999999999999999999888 46788999999999999999999999984459999999


Q ss_pred             EeCCCCE-EEEecCCCeEEEEECCCCeeeEEEE-----------------------------------------------
Q psy10662         83 LATDGDY-VACGSENNSLYIYYKGLSKHMHAYR-----------------------------------------------  114 (221)
Q Consensus        83 ~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------------------------  114 (221)
                      |.-||.. +++|+..|.+.+||++..+.+....                                               
T Consensus       252 FrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~  331 (910)
T KOG1539|consen  252 FRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRG  331 (910)
T ss_pred             eccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeecc
Confidence            9999985 6788888999999998776554333                                               


Q ss_pred             --------------------------------------------------------------------------------
Q psy10662        115 --------------------------------------------------------------------------------  114 (221)
Q Consensus       115 --------------------------------------------------------------------------------  114 (221)
                                                                                                      
T Consensus       332 GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W  411 (910)
T KOG1539|consen  332 GHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEW  411 (910)
T ss_pred             CCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhh
Confidence                                                                                            


Q ss_pred             ---------------------------------------------------------------eecccceeEeeE---EE
Q psy10662        115 ---------------------------------------------------------------FDTVRSMLESSF---VG  128 (221)
Q Consensus       115 ---------------------------------------------------------------~~~~~~~~~~~~---~~  128 (221)
                                                                                     ++...+....++   ..
T Consensus       412 ~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~a  491 (910)
T KOG1539|consen  412 DNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPA  491 (910)
T ss_pred             cceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCcc
Confidence                                                                           111222222333   36


Q ss_pred             eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccc--------------------------ccccccc
Q psy10662        129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS--------------------------MLERDRN  182 (221)
Q Consensus       129 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~--------------------------~~~~~~~  182 (221)
                      |..+|+.++.+.-++.+++++.+|.+++||......+..++......                          .......
T Consensus       492 h~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~  571 (910)
T KOG1539|consen  492 HKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVRE  571 (910)
T ss_pred             ccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHH
Confidence            78889999998888999999999999999998877655554322100                          1112344


Q ss_pred             ccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        183 EDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       183 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      +.+|...|++++|||||++|++++.|++|++||++++.+
T Consensus       572 f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~l  610 (910)
T KOG1539|consen  572 FWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTL  610 (910)
T ss_pred             hhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcce
Confidence            668999999999999999999999999999999999864

>KOG1407|consensus

Probab=99.95  E-value=3.3e-26  Score=152.56  Aligned_cols=187  Identities=16%  Similarity=0.210  Sum_probs=152.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC--------------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP--------------   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~--------------   65 (221)
                      ++..++++++.|..|++||.. .+++........+.| -+.|+| +++++.++.|..|...|.++.              
T Consensus        75 ~~~d~~atas~dk~ir~wd~r-~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne  152 (313)
T KOG1407|consen   75 KHPDLFATASGDKTIRIWDIR-SGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNE  152 (313)
T ss_pred             CCCcceEEecCCceEEEEEec-cCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeee
Confidence            357889999999999999999 677777766444444 455665 667888888888888776532              


Q ss_pred             ---------------------------ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecc
Q psy10662         66 ---------------------------NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV  118 (221)
Q Consensus        66 ---------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  118 (221)
                                                 +++..++.|.....|+.|+|+|++||+|+.|..+.+||+...-+.+.      
T Consensus       153 ~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~------  226 (313)
T KOG1407|consen  153 ISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERC------  226 (313)
T ss_pred             eeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhhee------
Confidence                                       44555668999999999999999999999999999999876655544      


Q ss_pred             cceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC
Q psy10662        119 RSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL  198 (221)
Q Consensus       119 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  198 (221)
                             +..+.-+|..+.|+-+|++||++++|..|-|=+++++..+..+.                ++++...++|+|.
T Consensus       227 -------isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~----------------~~~~t~tVAWHPk  283 (313)
T KOG1407|consen  227 -------ISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP----------------CEGPTFTVAWHPK  283 (313)
T ss_pred             -------eccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee----------------ccCCceeEEecCC
Confidence                   47788899999999999999999999999999999998877774                6678899999999


Q ss_pred             CcEEEEecCC---------CeEEEEECCc
Q psy10662        199 SRVLVAANSQ---------GIIKIYVIPI  218 (221)
Q Consensus       199 ~~~l~~~~~d---------g~i~iw~~~~  218 (221)
                      ..+||-++.|         |.++++-+++
T Consensus       284 ~~LLAyA~ddk~~d~~reag~vKiFG~~~  312 (313)
T KOG1407|consen  284 RPLLAYACDDKDGDSNREAGTVKIFGLSN  312 (313)
T ss_pred             CceeeEEecCCCCccccccceeEEecCCC
Confidence            9999887753         5788876653

>KOG1408|consensus

Probab=99.95  E-value=2.1e-27  Score=178.04  Aligned_cols=192  Identities=17%  Similarity=0.278  Sum_probs=160.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-c---CCcEEEecCCCcEEEEEcCC-Cccceeeeccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-N---KEDIVSASTDSQLKLWNINK-PNCLRSFVGHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~---~~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~~   75 (221)
                      |+|++||+|..-|+++||++. ..+.+..+.+|+..|.|+.|+ |   ...|++++.|+.|.+||+.. ..+++++.+|.
T Consensus       469 p~gqhLAsGDr~GnlrVy~Lq-~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HS  547 (1080)
T KOG1408|consen  469 PDGQHLASGDRGGNLRVYDLQ-ELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHS  547 (1080)
T ss_pred             CCcceecccCccCceEEEEeh-hhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccc
Confidence            799999999999999999998 666777889999999999999 4   35699999999999999853 23333333333


Q ss_pred             cc-------------------------------------------------eeEEEEeCCCCEEEEecCCCeEEEEECCC
Q psy10662         76 ND-------------------------------------------------KNFVGLATDGDYVACGSENNSLYIYYKGL  106 (221)
Q Consensus        76 ~~-------------------------------------------------v~~~~~~~~~~~l~~~~~d~~v~iwd~~~  106 (221)
                      ..                                                 ++.++..|+.+++++++.|..|+|||+++
T Consensus       548 ssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~s  627 (1080)
T KOG1408|consen  548 SSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIES  627 (1080)
T ss_pred             cceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccc
Confidence            33                                                 45555666778899999999999999999


Q ss_pred             CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662        107 SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT  186 (221)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (221)
                      ++..+.|+          .-.+|.+....+...|.|.|+++.+.|+++.++|..++++.....               +|
T Consensus       628 gKq~k~FK----------gs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~---------------GH  682 (1080)
T KOG1408|consen  628 GKQVKSFK----------GSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMT---------------GH  682 (1080)
T ss_pred             cceeeeec----------ccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhc---------------Cc
Confidence            99888763          224566778888999999999999999999999999888765543               89


Q ss_pred             ccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        187 NEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       187 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ...|+.+.|.+|-+.|++.+.||.|.+|.++.
T Consensus       683 sE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  683 SEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             chheeeeeecccchhheeecCCceEEEEECch
Confidence            99999999999999999999999999999974

>KOG0305|consensus

Probab=99.95  E-value=7.2e-27  Score=172.22  Aligned_cols=187  Identities=16%  Similarity=0.294  Sum_probs=158.8

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeec-cccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVG-HINDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~-~~~~v~~   80 (221)
                      .+.||+| ....|++|+.. +++.......+...|+++.|++ +++|++|..+|.|.|||..+.+.+..+.+ |...|-+
T Consensus       188 ~n~laVa-lg~~vylW~~~-s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~  265 (484)
T KOG0305|consen  188 ANVLAVA-LGQSVYLWSAS-SGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGS  265 (484)
T ss_pred             CCeEEEE-ecceEEEEecC-CCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEE
Confidence            3567776 45589999987 5665555555588999999997 66799999999999999999999999888 9999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      ++|.  +..+.+|+.++.|..+|++..+....            .+.+|...|..++|+++++++|+|+.|+.+.|||..
T Consensus       266 laW~--~~~lssGsr~~~I~~~dvR~~~~~~~------------~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~  331 (484)
T KOG0305|consen  266 LAWN--SSVLSSGSRDGKILNHDVRISQHVVS------------TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGL  331 (484)
T ss_pred             Eecc--CceEEEecCCCcEEEEEEecchhhhh------------hhhcccceeeeeEECCCCCeeccCCCccceEeccCC
Confidence            9998  66899999999999999987765433            257899999999999999999999999999999986


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEec--CCCeEEEEECCccc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAAN--SQGIIKIYVIPIRV  220 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~dg~i~iw~~~~~~  220 (221)
                      ...+...+.               .|...|.+++|+| ...+||+|+  .|+.|++|+..+++
T Consensus       332 ~~~p~~~~~---------------~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~  379 (484)
T KOG0305|consen  332 SPEPKFTFT---------------EHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGA  379 (484)
T ss_pred             CccccEEEe---------------ccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCc
Confidence            666555553               7999999999999 567889876  49999999998875

>KOG0306|consensus

Probab=99.95  E-value=1.1e-26  Score=174.59  Aligned_cols=188  Identities=15%  Similarity=0.285  Sum_probs=160.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCC-----Cccce--ee-
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINK-----PNCLR--SF-   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~-----~~~~~--~~-   71 (221)
                      |.++++++|...|.+.+||+. ....+.++++|.+.|++++.+|++ .+++||.|.+|++||..-     +...+  .+ 
T Consensus       422 pgd~~Iv~G~k~Gel~vfdla-S~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~  500 (888)
T KOG0306|consen  422 PGDRYIVLGTKNGELQVFDLA-SASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLK  500 (888)
T ss_pred             CCCceEEEeccCCceEEEEee-hhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeec
Confidence            567899999999999999998 677788888999999999999854 599999999999999742     11111  11 


Q ss_pred             ----eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         72 ----VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        72 ----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                          -.....|.|+.++||+++++.+=-|++|+||-+.+.+..-.             +.||.-+|.|+..+||+++++|
T Consensus       501 ~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFfls-------------LYGHkLPV~smDIS~DSklivT  567 (888)
T KOG0306|consen  501 HTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLS-------------LYGHKLPVLSMDISPDSKLIVT  567 (888)
T ss_pred             cceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeee-------------ecccccceeEEeccCCcCeEEe
Confidence                12356799999999999999999999999998887665443             5899999999999999999999


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      |+.|+.|++|-++-+.+...+               .+|...|.++.|.|+...+.+++.|+.|+-||-.
T Consensus       568 gSADKnVKiWGLdFGDCHKS~---------------fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~  622 (888)
T KOG0306|consen  568 GSADKNVKIWGLDFGDCHKSF---------------FAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGE  622 (888)
T ss_pred             ccCCCceEEeccccchhhhhh---------------hcccCceeEEEEcccceeEEEecCcceEEeechh
Confidence            999999999998877765544               4799999999999999999999999999999864

>KOG0640|consensus

Probab=99.95  E-value=1.2e-26  Score=158.50  Aligned_cols=204  Identities=15%  Similarity=0.224  Sum_probs=161.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCC--ceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceee---ecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNT--KEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSF---VGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~---~~~   74 (221)
                      |-...|++|+.|++|++||+.++  ++..+.++ ...+|.++.|+|. .+|+.|..-.++++||+++.++...-   ..|
T Consensus       182 Pre~ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qh  260 (430)
T KOG0640|consen  182 PRETILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQH  260 (430)
T ss_pred             chhheEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccc
Confidence            45678999999999999999743  23334444 4568999999985 55778888889999999998775543   468


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEee-CceEEEEEecCCCEEEEecCCCe
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHI-NDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      .+.|+++.+++.+++.++++.||.|++||--+++++.++            -..|. ..|.+..|..+|+++++.+.|..
T Consensus       261 t~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~------------~~AH~gsevcSa~Ftkn~kyiLsSG~DS~  328 (430)
T KOG0640|consen  261 TGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTI------------GNAHGGSEVCSAVFTKNGKYILSSGKDST  328 (430)
T ss_pred             ccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHH------------HhhcCCceeeeEEEccCCeEEeecCCcce
Confidence            889999999999999999999999999998888887765            13443 47889999999999999999999


Q ss_pred             EEEEEcCCCCceeeeeeec---------------cc----------ccccc---------cccccccccceeEEEEcCCC
Q psy10662        154 LYIYYKGLSKHMHAYRFDT---------------VR----------SMLER---------DRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~---------------~~----------~~~~~---------~~~~~~~~~~v~~~~~~~~~  199 (221)
                      +++|.+.++..+..+.-..               .+          ..+..         ..-..+|++.++.+.-||.+
T Consensus       329 vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~  408 (430)
T KOG0640|consen  329 VKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVE  408 (430)
T ss_pred             eeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCC
Confidence            9999999998887764110               00          00000         00113789999999999999


Q ss_pred             cEEEEecCCCeEEEEECC
Q psy10662        200 RVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       200 ~~l~~~~~dg~i~iw~~~  217 (221)
                      .-+++++.|-.+++|--+
T Consensus       409 p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  409 PAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             Cceeeecccceeeeeeec
Confidence            999999999999999654

>KOG0639|consensus

Probab=99.95  E-value=4.1e-27  Score=169.99  Aligned_cols=200  Identities=13%  Similarity=0.204  Sum_probs=165.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce-eeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE-ALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      |||+.|++|+.-.++.|||+..... ....+....-...+++.+|+ +..++++.||.|.|||+.+...++.+++|.+.+
T Consensus       475 pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGa  554 (705)
T KOG0639|consen  475 PDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  554 (705)
T ss_pred             CCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCc
Confidence            7999999999999999999984332 22334433446788888986 457799999999999999999999999999999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeec--------------------c-------cceeEeeEEEeeC
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDT--------------------V-------RSMLESSFVGHIN  131 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~--------------------~-------~~~~~~~~~~~~~  131 (221)
                      .||.++++|..|.+|+-|++|+.||+++++.+....|..                    .       .......+..|.+
T Consensus       555 scIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheS  634 (705)
T KOG0639|consen  555 SCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHES  634 (705)
T ss_pred             eeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeeccccc
Confidence            999999999999999999999999999988776554211                    1       1112234566788


Q ss_pred             ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662        132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  211 (221)
                      .|.++.|.+.|+++++.+.|..+..|....+..++..+                ....|.++..|.|.+|++||+.|..-
T Consensus       635 cVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqsk----------------E~SsVlsCDIS~ddkyIVTGSGdkkA  698 (705)
T KOG0639|consen  635 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK----------------ESSSVLSCDISFDDKYIVTGSGDKKA  698 (705)
T ss_pred             EEEEEEecccCceeeecCchhhhhhccCccccceeecc----------------ccCcceeeeeccCceEEEecCCCcce
Confidence            89999999999999999999999999887776655442                45679999999999999999999988


Q ss_pred             EEEEC
Q psy10662        212 KIYVI  216 (221)
Q Consensus       212 ~iw~~  216 (221)
                      .+|.+
T Consensus       699 TVYeV  703 (705)
T KOG0639|consen  699 TVYEV  703 (705)
T ss_pred             EEEEE
Confidence            88876

>KOG0973|consensus

Probab=99.95  E-value=8.7e-26  Score=175.37  Aligned_cols=205  Identities=16%  Similarity=0.209  Sum_probs=164.2

Q ss_pred             CCCceEEEEe--CCCeEEEEEecCC-----------ceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCC--
Q psy10662          1 MNSCHLAFGS--ADHCVHYYDLRNT-----------KEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINK--   64 (221)
Q Consensus         1 ~~~~~l~~~~--~dg~i~i~~~~~~-----------~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~--   64 (221)
                      ||+..+|||+  .|+.++||+...-           .+.+.++..|.+.|.|+.|+| +.+|++|+.|+.|.+|....  
T Consensus        23 pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~  102 (942)
T KOG0973|consen   23 PDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIG  102 (942)
T ss_pred             CCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccC
Confidence            7899999999  8999999987521           244567778999999999997 56699999999999999762  


Q ss_pred             ----------------CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEE
Q psy10662         65 ----------------PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG  128 (221)
Q Consensus        65 ----------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  128 (221)
                                      .+.+..+.+|...|..++|+|++.++++++-|++|.||+.++.+.+..             +.+
T Consensus       103 ~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~v-------------l~~  169 (942)
T KOG0973|consen  103 SGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKV-------------LRG  169 (942)
T ss_pred             CcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeee-------------eec
Confidence                            134566789999999999999999999999999999999988866554             589


Q ss_pred             eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeee----------------eeeccc------------------
Q psy10662        129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY----------------RFDTVR------------------  174 (221)
Q Consensus       129 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~----------------~~~~~~------------------  174 (221)
                      |.+.|..+.|+|-|++||+-+.|++|++|++..-.....+                .|.+.+                  
T Consensus       170 H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~I  249 (942)
T KOG0973|consen  170 HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAI  249 (942)
T ss_pred             ccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEE
Confidence            9999999999999999999999999999996653333222                122221                  


Q ss_pred             ---ccccccccccccccceeEEEEcCC-----Cc------------EEEEecCCCeEEEEECCc
Q psy10662        175 ---SMLERDRNEDDTNEFVSAVCWRQL-----SR------------VLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       175 ---~~~~~~~~~~~~~~~v~~~~~~~~-----~~------------~l~~~~~dg~i~iw~~~~  218 (221)
                         ..+.....+-+|..++..+.|+|.     .+            .+|+|+.|+.|.||....
T Consensus       250 ieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~  313 (942)
T KOG0973|consen  250 IERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTAL  313 (942)
T ss_pred             EecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCC
Confidence               122223345589999999999982     11            678899999999998743

>KOG0300|consensus

Probab=99.95  E-value=1.5e-26  Score=158.72  Aligned_cols=186  Identities=16%  Similarity=0.231  Sum_probs=159.6

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEc------CC------------
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNI------NK------------   64 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~------~~------------   64 (221)
                      ..+.+++.|.+-+||.++ .+.++..+.+|.+.|++++|++.+. +++++.|++..||..      ..            
T Consensus       161 pi~gtASADhTA~iWs~E-sg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE  239 (481)
T KOG0300|consen  161 PICGTASADHTARIWSLE-SGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEE  239 (481)
T ss_pred             cceeecccccceeEEeec-cccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhh
Confidence            478899999999999999 8999999999999999999998554 779999999999972      10            


Q ss_pred             ----------------------CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeeccccee
Q psy10662         65 ----------------------PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML  122 (221)
Q Consensus        65 ----------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  122 (221)
                                            ..++..+.+|...|.+..|-..|+.+++++.|.+..+||+++++.+..          
T Consensus       240 ~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~----------  309 (481)
T KOG0300|consen  240 EEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNI----------  309 (481)
T ss_pred             hhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceecc----------
Confidence                                  012345678999999999999999999999999999999999988765          


Q ss_pred             EeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE
Q psy10662        123 ESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL  202 (221)
Q Consensus       123 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  202 (221)
                         +.+|....+.++-+|..+++++++.|.+.++||++...              ..+..+.+|...|+++.|..+. .+
T Consensus       310 ---LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI--------------~sV~VFQGHtdtVTS~vF~~dd-~v  371 (481)
T KOG0300|consen  310 ---LTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAI--------------QSVAVFQGHTDTVTSVVFNTDD-RV  371 (481)
T ss_pred             ---ccCcchhccccccCCcceEEEEeccCceeEeccchhhc--------------ceeeeecccccceeEEEEecCC-ce
Confidence               48999999999999999999999999999999987322              1223456899999999998764 58


Q ss_pred             EEecCCCeEEEEECCc
Q psy10662        203 VAANSQGIIKIYVIPI  218 (221)
Q Consensus       203 ~~~~~dg~i~iw~~~~  218 (221)
                      ++|+.|.+|++||+++
T Consensus       372 VSgSDDrTvKvWdLrN  387 (481)
T KOG0300|consen  372 VSGSDDRTVKVWDLRN  387 (481)
T ss_pred             eecCCCceEEEeeecc
Confidence            8999999999999975

>KOG2445|consensus

Probab=99.95  E-value=3e-25  Score=151.22  Aligned_cols=215  Identities=14%  Similarity=0.214  Sum_probs=156.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCC---ceeeEEEEeccCceEEEEEe-c--CCcEEEecCCCcEEEEEcCCC---------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNT---KEALAVFKGHRKAVSYVKFL-N--KEDIVSASTDSQLKLWNINKP---------   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~~~i~~~~~~-~--~~~l~s~~~d~~v~~wd~~~~---------   65 (221)
                      +.|+++|+|+.|++|+|||.+..   -.+....+.|.+.|..+.|. |  ++.+++++.|+++.||.-...         
T Consensus        23 ~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~W  102 (361)
T KOG2445|consen   23 FYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRW  102 (361)
T ss_pred             ccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccccccccccee
Confidence            35899999999999999997522   25667788999999999997 5  567999999999999975211         


Q ss_pred             ccceeeeccccceeEEEEeCCC--CEEEEecCCCeEEEEECCCCeeeEEE-----------------------Eeec---
Q psy10662         66 NCLRSFVGHINDKNFVGLATDG--DYVACGSENNSLYIYYKGLSKHMHAY-----------------------RFDT---  117 (221)
Q Consensus        66 ~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~-----------------------~~~~---  117 (221)
                      .....+......|+.+.|.|..  -.+|+++.||.++||+.-..-.+..+                       .|.+   
T Consensus       103 v~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~  182 (361)
T KOG2445|consen  103 VRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRM  182 (361)
T ss_pred             EEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccc
Confidence            1233455667789999999864  47899999999999975332222111                       1111   


Q ss_pred             ----------------------------ccceeEeeEEEeeCceEEEEEecC----CCEEEEecCCCeEEEEEcCCCCc-
Q psy10662        118 ----------------------------VRSMLESSFVGHINDKNFVGLATD----GDYVACGSENNSLYIYYKGLSKH-  164 (221)
Q Consensus       118 ----------------------------~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~~~d~~~~~~-  164 (221)
                                                  +....+..+.+|..+|+.++|.|+    -.+||+++.|| |+||.+..... 
T Consensus       183 ~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~  261 (361)
T KOG2445|consen  183 HEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSA  261 (361)
T ss_pred             cCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccch
Confidence                                        112233456678899999999994    34799999999 99999874221 


Q ss_pred             eeeeee----ecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        165 MHAYRF----DTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       165 ~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      +..-..    ....-....+..+.+|...|..+.|+-.|..|++.+.||.+|+|..
T Consensus       262 i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWka  317 (361)
T KOG2445|consen  262 IEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKA  317 (361)
T ss_pred             hhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhh
Confidence            100000    0011233445567899999999999999999999999999999964

>KOG0269|consensus

Probab=99.95  E-value=1.1e-26  Score=174.81  Aligned_cols=188  Identities=18%  Similarity=0.279  Sum_probs=150.9

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCC-ccceeeecccccee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKP-NCLRSFVGHINDKN   79 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~~~~v~   79 (221)
                      .++|++|+.||+|++||++ ..+-..++.+....|..++|+|  +..++++...|.+++||++.. ++...+..|.++|.
T Consensus       146 p~iliSGSQDg~vK~~DlR-~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~  224 (839)
T KOG0269|consen  146 PNILISGSQDGTVKCWDLR-SKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVL  224 (839)
T ss_pred             ccEEEecCCCceEEEEeee-cccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceE
Confidence            5789999999999999999 5666777777889999999997  567999999999999999875 55667889999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE-EEEec--CCCeEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY-VACGS--ENNSLYI  156 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~--~d~~i~~  156 (221)
                      |+.|+|++.+||+||.|+.|+|||+.+++.....            .-....++.+++|-|...+ |++++  .|-.|+|
T Consensus       225 c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~------------tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~V  292 (839)
T KOG0269|consen  225 CLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKH------------TINTIAPVGRVKWRPARSYHLATCSMVVDTSVHV  292 (839)
T ss_pred             EEeecCCCceeeecCCCccEEEEeccCCCcccee------------EEeecceeeeeeeccCccchhhhhhccccceEEE
Confidence            9999999999999999999999999865442221            1233568899999997664 56555  4778999


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEECC
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ||++..              .-+...+..|...++.++|.. |-..|.+++.||.+..-.++
T Consensus       293 WDvrRP--------------YIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~k  340 (839)
T KOG0269|consen  293 WDVRRP--------------YIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFK  340 (839)
T ss_pred             Eeeccc--------------cccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhh
Confidence            998643              334445567899999999966 55678999999987644433

>KOG1274|consensus

Probab=99.94  E-value=2.6e-25  Score=170.21  Aligned_cols=198  Identities=15%  Similarity=0.147  Sum_probs=161.6

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      ++++|++|+.+++|.+|.+. .+..-..+....-++.+++|+ .+..++.|+.|-.|++-++........+.+|+.+|.+
T Consensus        65 ~s~~f~~~s~~~tv~~y~fp-s~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~  143 (933)
T KOG1274|consen   65 YSNHFLTGSEQNTVLRYKFP-SGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQ  143 (933)
T ss_pred             cccceEEeeccceEEEeeCC-CCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceee
Confidence            45689999999999999998 555444555566789999999 4677999999999999999999999999999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      +.|+|++++||+.+.||.|++||+..+....++.--.....     ......+..++|+|++..++..+.|+.|++|+..
T Consensus       144 l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~-----~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~  218 (933)
T KOG1274|consen  144 LSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNE-----FILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRK  218 (933)
T ss_pred             eeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCcccc-----ccccceeeeeeecCCCCeEEeeccCCeEEEEccC
Confidence            99999999999999999999999998877665521110000     0113446678999998888989999999999988


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ..+..+.+.-+             .+...+..++|+|+|+|||+++.||.|.|||+++
T Consensus       219 ~we~~f~Lr~~-------------~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t  263 (933)
T KOG1274|consen  219 GWELQFKLRDK-------------LSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT  263 (933)
T ss_pred             Cceeheeeccc-------------ccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence            87776655421             2344489999999999999999999999999984

>KOG0267|consensus

Probab=99.94  E-value=1.1e-27  Score=179.09  Aligned_cols=178  Identities=21%  Similarity=0.348  Sum_probs=158.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      +..+|++|+.+|+|++||++ ..+.++++.+|...+.++.|+| +.+.++++.|+.+++||.+...+...+.+|...+.+
T Consensus        81 ~E~LlaagsasgtiK~wDle-eAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~  159 (825)
T KOG0267|consen   81 SERLLAAGSASGTIKVWDLE-EAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDV  159 (825)
T ss_pred             chhhhcccccCCceeeeehh-hhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEE
Confidence            45678999999999999999 7888999999999999999999 566789999999999999999999999999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      +.|+|+|.+++.+++|..++|||+..++.+.+|             ..|...+.++.|+|..-+++.|+.|+.+++||++
T Consensus       160 l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef-------------~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dle  226 (825)
T KOG0267|consen  160 LRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEF-------------KSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLE  226 (825)
T ss_pred             EeecCCCceeeccCCcceeeeeccccccccccc-------------ccccccccccccCchhhhhccCCCCceeeeeccc
Confidence            999999999999999999999999988887664             7899999999999999999999999999999998


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      +.+.+...+               .....|.+..|+|++..+++|..+
T Consensus       227 tfe~I~s~~---------------~~~~~v~~~~fn~~~~~~~~G~q~  259 (825)
T KOG0267|consen  227 TFEVISSGK---------------PETDGVRSLAFNPDGKIVLSGEQI  259 (825)
T ss_pred             eeEEeeccC---------------CccCCceeeeecCCceeeecCchh
Confidence            766554332               235679999999999999888654

>KOG0270|consensus

Probab=99.94  E-value=1.4e-25  Score=159.28  Aligned_cols=188  Identities=14%  Similarity=0.187  Sum_probs=150.1

Q ss_pred             CceEEEEeCCCeEEEEEecCCc--eeeE------------------EEEeccCceEEEEEec--CCcEEEecCCCcEEEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTK--EALA------------------VFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLW   60 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~--~~~~------------------~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~w   60 (221)
                      |+++|.|..|-.|.|||+.-..  .+..                  .-.+|.+.|.++.|+.  .+.|++||.|.+|++|
T Consensus       192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lW  271 (463)
T KOG0270|consen  192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLW  271 (463)
T ss_pred             cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEE
Confidence            6899999999999999986111  1111                  1236888899999984  5679999999999999


Q ss_pred             EcCCCccceeeeccccceeEEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe
Q psy10662         61 NINKPNCLRSFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA  139 (221)
Q Consensus        61 d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  139 (221)
                      |+.++++..++..|...|.++.|+|.. .++++|+.|++|.+.|.+.......             .-...+.|-.++|.
T Consensus       272 D~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~-------------~wk~~g~VEkv~w~  338 (463)
T KOG0270|consen  272 DVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGK-------------EWKFDGEVEKVAWD  338 (463)
T ss_pred             EcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCc-------------eEEeccceEEEEec
Confidence            999999999999899999999999865 4789999999999999985222111             01235678889998


Q ss_pred             cCC-CEEEEecCCCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCC-CcEEEEecCCCeEEEEEC
Q psy10662        140 TDG-DYVACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       140 ~~~-~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~  216 (221)
                      |.. ..++++..||+++-+|++.. +++.++               ..|...|.++++++. -.+|++++.|+.+++|++
T Consensus       339 ~~se~~f~~~tddG~v~~~D~R~~~~~vwt~---------------~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~  403 (463)
T KOG0270|consen  339 PHSENSFFVSTDDGTVYYFDIRNPGKPVWTL---------------KAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKF  403 (463)
T ss_pred             CCCceeEEEecCCceEEeeecCCCCCceeEE---------------EeccCCcceEEecCCCCcceeeccccceEEEEee
Confidence            844 56788889999999999876 444444               479999999999885 467899999999999998


Q ss_pred             Cc
Q psy10662        217 PI  218 (221)
Q Consensus       217 ~~  218 (221)
                      ..
T Consensus       404 ~~  405 (463)
T KOG0270|consen  404 DV  405 (463)
T ss_pred             cC
Confidence            63

>KOG0310|consensus

Probab=99.94  E-value=2.5e-25  Score=159.64  Aligned_cols=183  Identities=13%  Similarity=0.200  Sum_probs=150.5

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL   83 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~   83 (221)
                      -+|+.+. -.+.||+.. +....+.+...+..+.++.|.. +..|++|...|.|++||+.+...++.+..|..++..+.|
T Consensus        41 d~aVt~S-~rvqly~~~-~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f  118 (487)
T KOG0310|consen   41 DFAVTSS-VRVQLYSSV-TRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKF  118 (487)
T ss_pred             ceEEecc-cEEEEEecc-hhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEe
Confidence            4555433 368899987 6666777777788899999985 455778888999999997776677888999999999999


Q ss_pred             eCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEecCCCeEEEEEcCC
Q psy10662         84 ATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus        84 ~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~  161 (221)
                      +|+++ .+++|++|+.+++||+.+...+.             .+.+|...|.+.+|+|. +.++++|+.||.|++||++.
T Consensus       119 ~~~d~t~l~s~sDd~v~k~~d~s~a~v~~-------------~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~  185 (487)
T KOG0310|consen  119 SPQDNTMLVSGSDDKVVKYWDLSTAYVQA-------------ELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRS  185 (487)
T ss_pred             cccCCeEEEecCCCceEEEEEcCCcEEEE-------------EecCCcceeEeeccccCCCeEEEecCCCceEEEEEecc
Confidence            99876 56788889999999998877532             35899999999999995 45899999999999999988


Q ss_pred             C-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        162 S-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       162 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      . ....++                .|..+|..+.+-|.|..+++++. ..+++||+-+|
T Consensus       186 ~~~~v~el----------------nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G  227 (487)
T KOG0310|consen  186 LTSRVVEL----------------NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTG  227 (487)
T ss_pred             CCceeEEe----------------cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCC
Confidence            7 444444                58889999999999999999875 57999999854

>KOG0641|consensus

Probab=99.94  E-value=4.7e-24  Score=140.15  Aligned_cols=196  Identities=14%  Similarity=0.164  Sum_probs=158.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc----eeeEEEEeccCceEEEEEe--c--CC-cEEEec-CCCcEEEEEcCCCcccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK----EALAVFKGHRKAVSYVKFL--N--KE-DIVSAS-TDSQLKLWNINKPNCLRS   70 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~~~i~~~~~~--~--~~-~l~s~~-~d~~v~~wd~~~~~~~~~   70 (221)
                      |+|.+||+|+.|.+|++..++...    -.-..+.-|.+.|..++|-  |  ++ .|++++ .|..|++-|...++....
T Consensus        99 ~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a  178 (350)
T KOG0641|consen   99 PCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHA  178 (350)
T ss_pred             CccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCccee
Confidence            689999999999999998765221    1234567799999999997  3  23 355554 477888889999999999


Q ss_pred             eeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         71 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        71 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      +.+|.+-|.++. +-++-.+++|+.|.+|++||++-..++.++.-+....      .-..+.|.+++..|.|++|++|-.
T Consensus       179 ~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~------glessavaav~vdpsgrll~sg~~  251 (350)
T KOG0641|consen  179 LSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDG------GLESSAVAAVAVDPSGRLLASGHA  251 (350)
T ss_pred             ecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCC------CcccceeEEEEECCCcceeeeccC
Confidence            999999887763 3357899999999999999999888887763221111      012356889999999999999999


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      |....+||++-+..++.+.               .|...|.++.|+|...||.+++.|..|++=|++.
T Consensus       252 dssc~lydirg~r~iq~f~---------------phsadir~vrfsp~a~yllt~syd~~ikltdlqg  304 (350)
T KOG0641|consen  252 DSSCMLYDIRGGRMIQRFH---------------PHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG  304 (350)
T ss_pred             CCceEEEEeeCCceeeeeC---------------CCccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence            9999999999888777664               7899999999999999999999999999999874

>KOG0301|consensus

Probab=99.94  E-value=3.5e-25  Score=165.03  Aligned_cols=176  Identities=19%  Similarity=0.271  Sum_probs=150.0

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEe
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLA   84 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~   84 (221)
                      .+++|+.|.++++|...   ++...+++|...|+++++-|++.++||+.|.+|++|.-  ++.++++.+|.+.|+.+++-
T Consensus       114 ~~iSgSWD~TakvW~~~---~l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl  188 (745)
T KOG0301|consen  114 TLISGSWDSTAKVWRIG---ELVYSLQGHTASVWAVASLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVL  188 (745)
T ss_pred             ceEecccccceEEecch---hhhcccCCcchheeeeeecCCCcEEeccCcceeeeccC--CchhhhhccchhheeeeEEe
Confidence            38999999999999754   55667999999999999999889999999999999974  78889999999999999999


Q ss_pred             CCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCc
Q psy10662         85 TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH  164 (221)
Q Consensus        85 ~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~  164 (221)
                      +++ .|++++.||.|+.|++ +++.+.+             +.+|.+-+++++..+++..++++++|+++++|+..  ++
T Consensus       189 ~~~-~flScsNDg~Ir~w~~-~ge~l~~-------------~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~  251 (745)
T KOG0301|consen  189 DDS-HFLSCSNDGSIRLWDL-DGEVLLE-------------MHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--EC  251 (745)
T ss_pred             cCC-CeEeecCCceEEEEec-cCceeee-------------eeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ce
Confidence            865 5889999999999998 5666554             48999999999988888999999999999999875  44


Q ss_pred             eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+.+.               -....|+++++-++|. +++|+.||.|++|....
T Consensus       252 ~q~I~---------------lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k  289 (745)
T KOG0301|consen  252 VQVIT---------------LPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK  289 (745)
T ss_pred             EEEEe---------------cCccceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence            44443               2334789999888887 67777899999998763

>KOG1273|consensus

Probab=99.94  E-value=4.9e-25  Score=150.84  Aligned_cols=201  Identities=15%  Similarity=0.238  Sum_probs=149.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      +.|.+||+|+.||.|.|||+. +..+-+.+.+|-.+|++++|++ +..|++++.|..|++||+..+.+++.+. ..++|+
T Consensus        33 ~~G~~lAvGc~nG~vvI~D~~-T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~  110 (405)
T KOG1273|consen   33 RWGDYLAVGCANGRVVIYDFD-TFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVW  110 (405)
T ss_pred             cCcceeeeeccCCcEEEEEcc-ccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccCccc
Confidence            458899999999999999998 7778888999999999999997 4559999999999999999887766553 222232


Q ss_pred             EEE-----------------------------------------------EeCCCCEEEEecCCCeEEEEECCCCeeeEE
Q psy10662         80 FVG-----------------------------------------------LATDGDYVACGSENNSLYIYYKGLSKHMHA  112 (221)
Q Consensus        80 ~~~-----------------------------------------------~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~  112 (221)
                      .+.                                               |.+.|+++++|...|.+.++|..+.+++..
T Consensus       111 ~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas  190 (405)
T KOG1273|consen  111 GAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVAS  190 (405)
T ss_pred             eeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeee
Confidence            222                                               444588999999999999999998888776


Q ss_pred             EEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccc--cccce
Q psy10662        113 YRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD--TNEFV  190 (221)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v  190 (221)
                      ++..            ....|..+.++..|++|+.-+.|+.|+.|+++.-...      ......++.+.+..  ....=
T Consensus       191 ~rit------------s~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~------~r~~e~e~~~K~qDvVNk~~W  252 (405)
T KOG1273|consen  191 FRIT------------SVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDE------GRDGEVEPEHKLQDVVNKLQW  252 (405)
T ss_pred             eeec------------hheeeeEEEEeccCcEEEEecCCceEEEEehhhhccc------CccCCcChhHHHHHHHhhhhh
Confidence            5211            1356888999999999999999999999997521110      00011111111100  11223


Q ss_pred             eEEEEcCCCcEEEEecC-CCeEEEEECCcccC
Q psy10662        191 SAVCWRQLSRVLVAANS-QGIIKIYVIPIRVL  221 (221)
Q Consensus       191 ~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~l  221 (221)
                      ++++|+.+|.|+++++. -..+++|+-..|.|
T Consensus       253 k~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsL  284 (405)
T KOG1273|consen  253 KKCCFSGDGEYVCAGSARAHALYIWEKSIGSL  284 (405)
T ss_pred             hheeecCCccEEEeccccceeEEEEecCCcce
Confidence            67899999999988874 77899999888764

>KOG0302|consensus

Probab=99.94  E-value=1.2e-25  Score=156.90  Aligned_cols=199  Identities=17%  Similarity=0.255  Sum_probs=144.0

Q ss_pred             eEEEEeCCCeEEEEEecCCcee--eEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCcc--ceeeeccccce
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEA--LAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNC--LRSFVGHINDK   78 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~--~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~--~~~~~~~~~~v   78 (221)
                      .|++|.--+.|++|...+..-.  ...+.+|...|-.++|+|  ++.|++|+.||+|+|||++.+..  ....+.|.+.|
T Consensus       226 ~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDV  305 (440)
T KOG0302|consen  226 RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDV  305 (440)
T ss_pred             ccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCce
Confidence            4778878889999998742211  234567999999999998  56799999999999999998732  22337899999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEecCCCeEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACGSENNSLYIY  157 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~  157 (221)
                      +.+.|+..-.+||+|+.||+++|||++.-+.          .+++..++.|..+|+++.|+|. ...|++++.|.+|.+|
T Consensus       306 NVISWnr~~~lLasG~DdGt~~iwDLR~~~~----------~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiW  375 (440)
T KOG0302|consen  306 NVISWNRREPLLASGGDDGTLSIWDLRQFKS----------GQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIW  375 (440)
T ss_pred             eeEEccCCcceeeecCCCceEEEEEhhhccC----------CCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEE
Confidence            9999998888999999999999999985432          2455677999999999999994 4578899999999999


Q ss_pred             EcCCCCceeeeeeecccc---cccccccccccccceeEEEEcCC-CcEEEEecCCCeEEEE
Q psy10662        158 YKGLSKHMHAYRFDTVRS---MLERDRNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIY  214 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw  214 (221)
                      |+..........-.....   ....+.-.+.-...+..+.|++. ..+|++.+.|| +.||
T Consensus       376 DlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVf  435 (440)
T KOG0302|consen  376 DLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVF  435 (440)
T ss_pred             EeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEE
Confidence            987554321111000011   11111111112345788999985 45778888888 4444

>KOG0301|consensus

Probab=99.94  E-value=2.2e-25  Score=166.05  Aligned_cols=180  Identities=18%  Similarity=0.290  Sum_probs=155.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      ++-+|++|+.|..|.+|.+. +..++.++.+|+..|.++....+..+++||.|.++++|..  +++...+.+|...|+++
T Consensus        70 ~~~~l~~g~~D~~i~v~~~~-~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv  146 (745)
T KOG0301|consen   70 DKGRLVVGGMDTTIIVFKLS-QAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRI--GELVYSLQGHTASVWAV  146 (745)
T ss_pred             cCcceEeecccceEEEEecC-CCCchhhhhccccceeeeecCCcCceEecccccceEEecc--hhhhcccCCcchheeee
Confidence            44568999999999999998 7889999999999999998777677999999999999965  56666789999999999


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      +.-|++ .++||+.|.+|++|.-  ++.             ++++.+|...|+.+++-|++ .+++++.||.|++|++ +
T Consensus       147 ~~l~e~-~~vTgsaDKtIklWk~--~~~-------------l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~  208 (745)
T KOG0301|consen  147 ASLPEN-TYVTGSADKTIKLWKG--GTL-------------LKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-D  208 (745)
T ss_pred             eecCCC-cEEeccCcceeeeccC--Cch-------------hhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-c
Confidence            999987 7899999999999964  333             34568999999999999875 5788999999999998 5


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ++.+..+               .+|...|.+++..+++..++++++|+++++|+..
T Consensus       209 ge~l~~~---------------~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~  249 (745)
T KOG0301|consen  209 GEVLLEM---------------HGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD  249 (745)
T ss_pred             Cceeeee---------------eccceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence            5555444               3899999999988888999999999999999865

>KOG1332|consensus

Probab=99.94  E-value=1.6e-25  Score=148.09  Aligned_cols=193  Identities=18%  Similarity=0.200  Sum_probs=149.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEecCCc---EEEecCCCcEEEEEcCCC-c--cceeeecc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNKED---IVSASTDSQLKLWNINKP-N--CLRSFVGH   74 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~---l~s~~~d~~v~~wd~~~~-~--~~~~~~~~   74 (221)
                      -|.+||+++.||.|.||.-++.. ........|+..|++++|.|.++   |++++.||.|.+.+.+.. .  ..+....|
T Consensus        69 ~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH  148 (299)
T KOG1332|consen   69 FGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAH  148 (299)
T ss_pred             cCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcc
Confidence            37899999999999999987321 23456678999999999998544   889999999999998764 1  22334678


Q ss_pred             ccceeEEEEeCC---C-----------CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         75 INDKNFVGLATD---G-----------DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        75 ~~~v~~~~~~~~---~-----------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                      .-.|++++|.|.   |           +.|++|+.|+.|+||+....+.+           ....+.+|..-|+.++|.|
T Consensus       149 ~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~-----------~e~~l~~H~dwVRDVAwaP  217 (299)
T KOG1332|consen  149 EIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWK-----------LERTLEGHKDWVRDVAWAP  217 (299)
T ss_pred             ccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchh-----------hhhhhhhcchhhhhhhhcc
Confidence            889999999986   3           46999999999999998765332           2234789999999999999


Q ss_pred             CC----CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        141 DG----DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       141 ~~----~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      .-    ..|+++++||.+.||-.+.....  .+          ...++.....+..+.||+.|+.|+.++.|+.+.+|.-
T Consensus       218 ~~gl~~s~iAS~SqDg~viIwt~~~e~e~--wk----------~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke  285 (299)
T KOG1332|consen  218 SVGLPKSTIASCSQDGTVIIWTKDEEYEP--WK----------KTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKE  285 (299)
T ss_pred             ccCCCceeeEEecCCCcEEEEEecCccCc--cc----------ccccccCCcceEEEEEeccccEEEEecCCcEEEEEEe
Confidence            53    47999999999999976522111  10          0111234567999999999999999999999999964


Q ss_pred             C
Q psy10662        217 P  217 (221)
Q Consensus       217 ~  217 (221)
                      .
T Consensus       286 ~  286 (299)
T KOG1332|consen  286 N  286 (299)
T ss_pred             C
Confidence            4

>KOG1034|consensus

Probab=99.94  E-value=3e-25  Score=152.40  Aligned_cols=203  Identities=18%  Similarity=0.294  Sum_probs=155.4

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC--cEEEecCCCcEEEEEcCCCccceee---eccccce
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE--DIVSASTDSQLKLWNINKPNCLRSF---VGHINDK   78 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~~~~~~---~~~~~~v   78 (221)
                      -+||+|+.-|.|+|.|+. .++....+.+|...|..|.|+|.+  .+++++.|..|++|++++..++..+   .+|.+.|
T Consensus       106 p~la~~G~~GvIrVid~~-~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeV  184 (385)
T KOG1034|consen  106 PFLAAGGYLGVIRVIDVV-SGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEV  184 (385)
T ss_pred             eeEEeecceeEEEEEecc-hhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcE
Confidence            478888899999999998 788889999999999999999854  7999999999999999999998877   5799999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------------------------------
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------------------------  114 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------------------  114 (221)
                      .++.|++++.++++++.|..+++|++...+....+.                                            
T Consensus       185 LSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~i  264 (385)
T KOG1034|consen  185 LSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFI  264 (385)
T ss_pred             EEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhhe
Confidence            999999999999999999999999987332111000                                            


Q ss_pred             -----------eecc----------cc----eeEeeEEEeeCceEEE--EEecCCCEEEEecCCCeEEEEEcCCCCceee
Q psy10662        115 -----------FDTV----------RS----MLESSFVGHINDKNFV--GLATDGDYVACGSENNSLYIYYKGLSKHMHA  167 (221)
Q Consensus       115 -----------~~~~----------~~----~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~  167 (221)
                                 |.+.          .+    .....+.-....+.-+  +|+|-+++||.|.+.|.|++||++...+...
T Consensus       265 lSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~  344 (385)
T KOG1034|consen  265 LSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKC  344 (385)
T ss_pred             eecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccC
Confidence                       1110          00    0111222223344444  4567788999999999999999987665311


Q ss_pred             eeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        168 YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      -..           ........|...+|+.||.+|+..+.|+.|--||..+
T Consensus       345 ttl-----------~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv~  384 (385)
T KOG1034|consen  345 TTL-----------THSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRVS  384 (385)
T ss_pred             ceE-----------EeccccceeeeeeecccCcEEEEEeCCCcEEEEEeec
Confidence            110           1112345789999999999999999999999998643

>KOG1446|consensus

Probab=99.94  E-value=1.2e-23  Score=143.71  Aligned_cols=194  Identities=18%  Similarity=0.325  Sum_probs=146.2

Q ss_pred             eEEEEeC--CCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          5 HLAFGSA--DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         5 ~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      .++.++.  |.+|+..++. +.+.++.+.+|...|.+|+.+| +..+++++.|++|++||++..++...+...  .-..+
T Consensus        70 ~~i~sStk~d~tIryLsl~-dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~--~~pi~  146 (311)
T KOG1446|consen   70 TVIHSSTKEDDTIRYLSLH-DNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLS--GRPIA  146 (311)
T ss_pred             eEEEccCCCCCceEEEEee-cCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecC--CCcce
Confidence            3444444  7899999998 8899999999999999999998 677999999999999999988877665432  33457


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCC--eeeEEEE--------------------------------eecccceeEeeEE
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLS--KHMHAYR--------------------------------FDTVRSMLESSFV  127 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~--~~~~~~~--------------------------------~~~~~~~~~~~~~  127 (221)
                      +|.|+|-++|++.....|++||++.-  .+..++.                                .+...+.....+.
T Consensus       147 AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs  226 (311)
T KOG1446|consen  147 AFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFS  226 (311)
T ss_pred             eECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEe
Confidence            89999998888888878999998754  2222221                                1222333344444


Q ss_pred             EeeCce---EEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE
Q psy10662        128 GHINDK---NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA  204 (221)
Q Consensus       128 ~~~~~v---~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  204 (221)
                      .+...-   ....|.||++++++|+.||+|.+|+++++.....+.              ..+..++.++.|+|.-.++++
T Consensus       227 ~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~--------------~~~~~~~~~~~fnP~~~mf~s  292 (311)
T KOG1446|consen  227 GYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLR--------------GPNGGPVSCVRFNPRYAMFVS  292 (311)
T ss_pred             eccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEec--------------CCCCCCccccccCCceeeeee
Confidence            444322   467899999999999999999999999988776664              115667888999998877777


Q ss_pred             ecCCCeEEEEECC
Q psy10662        205 ANSQGIIKIYVIP  217 (221)
Q Consensus       205 ~~~dg~i~iw~~~  217 (221)
                      ++  ..+.+|=..
T Consensus       293 a~--s~l~fw~p~  303 (311)
T KOG1446|consen  293 AS--SNLVFWLPD  303 (311)
T ss_pred             cC--ceEEEEecc
Confidence            65  467778554

>KOG0772|consensus

Probab=99.93  E-value=9.4e-25  Score=158.11  Aligned_cols=207  Identities=18%  Similarity=0.250  Sum_probs=147.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceee------------EEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEAL------------AVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPN   66 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~------------~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~   66 (221)
                      +.|..|++.+..-..+|+|-. ....+            ..-++|...++|.+|+|  .+.+++++.||++++||+.+.+
T Consensus       224 ~Tg~~iLvvsg~aqakl~DRd-G~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k  302 (641)
T KOG0772|consen  224 VTGDQILVVSGSAQAKLLDRD-GFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTK  302 (641)
T ss_pred             CCCCeEEEEecCcceeEEccC-CceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCch
Confidence            356777777778889999976 33222            22357888999999998  4569999999999999997654


Q ss_pred             cc-eeee-----ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC--ceEEEEE
Q psy10662         67 CL-RSFV-----GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN--DKNFVGL  138 (221)
Q Consensus        67 ~~-~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~  138 (221)
                      .. ..++     +..-+++.++|+|+++.||+|+.||.|.+|+......-..+        .  .-..|..  .|+++.|
T Consensus       303 ~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~--------~--vk~AH~~g~~Itsi~F  372 (641)
T KOG0772|consen  303 SQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVM--------K--VKDAHLPGQDITSISF  372 (641)
T ss_pred             hheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccce--------E--eeeccCCCCceeEEEe
Confidence            32 2232     22336899999999999999999999999997543221111        1  1245655  8999999


Q ss_pred             ecCCCEEEEecCCCeEEEEEcCCCCce-eee------------eeecccc-----------------------ccccccc
Q psy10662        139 ATDGDYVACGSENNSLYIYYKGLSKHM-HAY------------RFDTVRS-----------------------MLERDRN  182 (221)
Q Consensus       139 ~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~------------~~~~~~~-----------------------~~~~~~~  182 (221)
                      +++|++|++-+.|+.+++||++..+.. ...            .|.+..+                       .+..+..
T Consensus       373 S~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~k  452 (641)
T KOG0772|consen  373 SYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYK  452 (641)
T ss_pred             ccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEE
Confidence            999999999999999999999865422 111            0111111                       1111222


Q ss_pred             ccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        183 EDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       183 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +.-....|..+.|+|.=+.|+.|+.||.+++|-=++
T Consensus       453 i~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyYdp~  488 (641)
T KOG0772|consen  453 IDISTASVVRCLWHPKLNQIFAGSGDGTAHVYYDPN  488 (641)
T ss_pred             ecCCCceEEEEeecchhhheeeecCCCceEEEECcc
Confidence            223366788999999989999999999999985543

>KOG0268|consensus

Probab=99.93  E-value=2.6e-25  Score=154.56  Aligned_cols=192  Identities=16%  Similarity=0.224  Sum_probs=155.2

Q ss_pred             eeEEEEeccCceEEEEEecCC--cEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEE
Q psy10662         26 ALAVFKGHRKAVSYVKFLNKE--DIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  103 (221)
Q Consensus        26 ~~~~~~~~~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd  103 (221)
                      .+..+.+|.+.|.+++=+|..  .+++|+.||.|++||+.+.++...++.|.+.|..+++..  ..+++++.|.+|+.|-
T Consensus        58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk  135 (433)
T KOG0268|consen   58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWK  135 (433)
T ss_pred             chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeee
Confidence            345678999999999999865  499999999999999999999999999999999999976  6789999999999997


Q ss_pred             CCCCeeeEEEE--------------------------eecccceeEeeEEEeeCceEEEEEecCCC-EEEEecCCCeEEE
Q psy10662        104 KGLSKHMHAYR--------------------------FDTVRSMLESSFVGHINDKNFVGLATDGD-YVACGSENNSLYI  156 (221)
Q Consensus       104 ~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~  156 (221)
                      +... ++.++.                          |+.....++.++.-....+.++.|+|... .|+++++|+.|.+
T Consensus       136 ~~~~-p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvL  214 (433)
T KOG0268|consen  136 IDGP-PLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVL  214 (433)
T ss_pred             ccCC-cceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEE
Confidence            5432 333322                          56666667777777778899999999665 5677779999999


Q ss_pred             EEcCCCCceeeeeee---------c------------------ccccccccccccccccceeEEEEcCCCcEEEEecCCC
Q psy10662        157 YYKGLSKHMHAYRFD---------T------------------VRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG  209 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~---------~------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  209 (221)
                      ||+++..++..+...         +                  .+.+..++..+.+|.+.|.+++|||.|+-+++||.|.
T Consensus       215 yD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDk  294 (433)
T KOG0268|consen  215 YDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDK  294 (433)
T ss_pred             EecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccc
Confidence            999998877655322         1                  1112234555678999999999999999999999999


Q ss_pred             eEEEEECCccc
Q psy10662        210 IIKIYVIPIRV  220 (221)
Q Consensus       210 ~i~iw~~~~~~  220 (221)
                      +|+||.+..++
T Consensus       295 sIRIf~~~~~~  305 (433)
T KOG0268|consen  295 SIRIFPVNHGH  305 (433)
T ss_pred             eEEEeecCCCc
Confidence            99999987653

>KOG0294|consensus

Probab=99.93  E-value=5.6e-24  Score=145.44  Aligned_cols=200  Identities=11%  Similarity=0.160  Sum_probs=151.8

Q ss_pred             eEEEEeCCCeEEEEEecCCc-----------eeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec
Q psy10662          5 HLAFGSADHCVHYYDLRNTK-----------EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      .|++|+....|.-+++....           .++..+++|.++|++++.+ +.++++|+.|.+|+|||+++...+..+..
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs-~~~~aSGssDetI~IYDm~k~~qlg~ll~   81 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS-GPYVASGSSDETIHIYDMRKRKQLGILLS   81 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec-ceeEeccCCCCcEEEEeccchhhhcceec
Confidence            47888898888888776322           2356678899999999986 56899999999999999999999998989


Q ss_pred             cccceeEEEEeCCCC--EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         74 HINDKNFVGLATDGD--YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      |.+.|+++.|.+...  .|++|+.||.|.+|+....+.+..             +.+|...|+.++.+|.+++.++.+.|
T Consensus        82 HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~s-------------lK~H~~~Vt~lsiHPS~KLALsVg~D  148 (362)
T KOG0294|consen   82 HAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKS-------------LKAHKGQVTDLSIHPSGKLALSVGGD  148 (362)
T ss_pred             cccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeee-------------ecccccccceeEecCCCceEEEEcCC
Confidence            999999999998765  899999999999999887766655             58999999999999999999999999


Q ss_pred             CeEEEEEcCCCCceeeeeee---------ccccccc---------------ccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        152 NSLYIYYKGLSKHMHAYRFD---------TVRSMLE---------------RDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~---------~~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      +.+++||+-.++.-+..++.         +.+....               .+...-.....+.++.|. ++..|++|..
T Consensus       149 ~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d  227 (362)
T KOG0294|consen  149 QVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGD  227 (362)
T ss_pred             ceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeec-CCceEEEecC
Confidence            99999999887765544322         1111000               000000112234444443 4567777777


Q ss_pred             CCeEEEEECCcc
Q psy10662        208 QGIIKIYVIPIR  219 (221)
Q Consensus       208 dg~i~iw~~~~~  219 (221)
                      |+.|.+||..+.
T Consensus       228 ~~~i~~~D~ds~  239 (362)
T KOG0294|consen  228 NEWISLKDTDSD  239 (362)
T ss_pred             CceEEEeccCCC
Confidence            888888876653

>KOG2048|consensus

Probab=99.93  E-value=3.8e-23  Score=153.84  Aligned_cols=201  Identities=14%  Similarity=0.203  Sum_probs=163.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEecc-CceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-KAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      +++.||.+-.+|.|.||++.+.--+...+.++. ..|.+++|+++++|++.+.+|.|.-||+.+++....+....+.|++
T Consensus        36 kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWs  115 (691)
T KOG2048|consen   36 KSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWS  115 (691)
T ss_pred             cCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCceeEEecCCCcceeE
Confidence            456799999999999999996555566676655 4699999999999999999999999999999999998888899999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      ++.+|.+..++.|++||.+..++...++.....           .+....+.+.+++|+|++..+++|+.||.|++||..
T Consensus       116 iai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r-----------~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~  184 (691)
T KOG2048|consen  116 IAINPENTILAIGCDDGVLYDFSIGPDKITYKR-----------SLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVK  184 (691)
T ss_pred             EEeCCccceEEeecCCceEEEEecCCceEEEEe-----------ecccccceEEEEEecCCccEEEecccCceEEEEEcC
Confidence            999999999999999997777777766655442           344556889999999999999999999999999999


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      .+..+........+       .-+....-|.++.|-.+ ..|++|..-|+|.+||...+.|
T Consensus       185 ~~~t~~~~~~~~d~-------l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTL  237 (691)
T KOG2048|consen  185 SGQTLHIITMQLDR-------LSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTL  237 (691)
T ss_pred             CCceEEEeeecccc-------cccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCcch
Confidence            88876633321111       00123446788888865 5699999999999999988764

>KOG1036|consensus

Probab=99.93  E-value=6.1e-24  Score=144.71  Aligned_cols=186  Identities=17%  Similarity=0.243  Sum_probs=140.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      |...+++|+.||.|+.+|+. ++.. ..+..|..+|.||.+++ .+.+++|+.|++|++||.+.......+. ....|.+
T Consensus        64 d~~~~~~G~~dg~vr~~Dln-~~~~-~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~  140 (323)
T KOG1036|consen   64 DESTIVTGGLDGQVRRYDLN-TGNE-DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYC  140 (323)
T ss_pred             CCceEEEeccCceEEEEEec-CCcc-eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc-cCceEEE
Confidence            45678999999999999998 4443 45666999999999996 6779999999999999999865555554 3447888


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------------------------------eecc--cceeEee
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------------------------------FDTV--RSMLESS  125 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------------------------------~~~~--~~~~~~~  125 (221)
                      +...  ++.|+.|+.+..|.+||+++.....+..                                 ++..  .......
T Consensus       141 ~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkya  218 (323)
T KOG1036|consen  141 MDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYA  218 (323)
T ss_pred             Eecc--CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhcee
Confidence            7775  6789999999999999997654332111                                 1111  0111123


Q ss_pred             EEEee---------CceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc
Q psy10662        126 FVGHI---------NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR  196 (221)
Q Consensus       126 ~~~~~---------~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  196 (221)
                      +..|.         .+|++++|+|-...|+||+.||.|.+||+.+.+.+..+.               .....|.+++|+
T Consensus       219 FkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~---------------~~~~SI~slsfs  283 (323)
T KOG1036|consen  219 FKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLA---------------KYETSISSLSFS  283 (323)
T ss_pred             EEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhcc---------------CCCCceEEEEec
Confidence            33332         368899999999999999999999999998877665553               334579999999


Q ss_pred             CCCcEEEEecC
Q psy10662        197 QLSRVLVAANS  207 (221)
Q Consensus       197 ~~~~~l~~~~~  207 (221)
                      .+|..||+++.
T Consensus       284 ~dG~~LAia~s  294 (323)
T KOG1036|consen  284 MDGSLLAIASS  294 (323)
T ss_pred             cCCCeEEEEec
Confidence            99999999874

>KOG0278|consensus

Probab=99.93  E-value=7.7e-26  Score=150.21  Aligned_cols=187  Identities=19%  Similarity=0.252  Sum_probs=163.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |+|.+|++++.||.-.+-+-+ ++.=+.+|.+|++.|++...+.+ ...++++.|-+-++||.-++..+.++. |+..|.
T Consensus        27 p~g~flisa~kd~~pmlr~g~-tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk  104 (334)
T KOG0278|consen   27 PDGYFLISASKDGKPMLRNGD-TGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVK  104 (334)
T ss_pred             CCceEEEEeccCCCchhccCC-CCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheee
Confidence            789999999999988777666 77889999999999999988854 447789999999999999999999885 999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      .++|+.|.++|++|+.+..++|||++..+-.            ...+.+|.+.|..+.|....+.|+++..|+.|++||.
T Consensus       105 ~~af~~ds~~lltgg~ekllrvfdln~p~Ap------------p~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~  172 (334)
T KOG0278|consen  105 AVAFSQDSNYLLTGGQEKLLRVFDLNRPKAP------------PKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDH  172 (334)
T ss_pred             eEEecccchhhhccchHHHhhhhhccCCCCC------------chhhcCCCCcceeEEEeccCceEEeeccCCceEEEEe
Confidence            9999999999999999999999998765432            2346799999999999998889999999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +++...+.+.+                ..+|+++..+++|++|.++ ..+.|.+||..+
T Consensus       173 rTgt~v~sL~~----------------~s~VtSlEvs~dG~ilTia-~gssV~Fwdaks  214 (334)
T KOG0278|consen  173 RTGTEVQSLEF----------------NSPVTSLEVSQDGRILTIA-YGSSVKFWDAKS  214 (334)
T ss_pred             ccCcEEEEEec----------------CCCCcceeeccCCCEEEEe-cCceeEEecccc
Confidence            99999988864                3478999999999988776 456799999875

>KOG4378|consensus

Probab=99.93  E-value=2.1e-24  Score=155.89  Aligned_cols=189  Identities=16%  Similarity=0.197  Sum_probs=160.5

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeecc-ccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGH-INDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~-~~~v~~   80 (221)
                      ..++++|+..+.|+|||+. .+.+.+.+++|.+.|+++.|+ .+.+|++++..|.|.+..+.++.....+... ...|.-
T Consensus        91 S~y~~sgG~~~~Vkiwdl~-~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRl  169 (673)
T KOG4378|consen   91 SLYEISGGQSGCVKIWDLR-AKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRL  169 (673)
T ss_pred             ceeeeccCcCceeeehhhH-HHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEE
Confidence            4678999999999999998 677778889999999999998 5888999999999999999998877777544 345668


Q ss_pred             EEEeCCCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEE
Q psy10662         81 VGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYY  158 (221)
Q Consensus        81 ~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d  158 (221)
                      +.|+|..++ |.+++.+|.|.+||+....++..+            ...|..+...++|+| +..+|++.+.|..|.+||
T Consensus       170 l~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~------------~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD  237 (673)
T KOG4378|consen  170 LRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHA------------SEAHSAPCRGICFSPSNEALLVSVGYDKKINIYD  237 (673)
T ss_pred             eecccccceeeEeeccCCeEEEEeccCCCcccch------------hhhccCCcCcceecCCccceEEEecccceEEEee
Confidence            999998774 678899999999999887776654            467888999999999 456789999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+.......+.                ...+...++|.++|.+|++|+..|.|..||++..+
T Consensus       238 ~~s~~s~~~l~----------------y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k  283 (673)
T KOG4378|consen  238 IRSQASTDRLT----------------YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTK  283 (673)
T ss_pred             cccccccceee----------------ecCCcceeeecCCceEEEeecCCceEEEEecccCC
Confidence            98776655554                24468899999999999999999999999998643

>KOG1539|consensus

Probab=99.92  E-value=3.6e-24  Score=162.64  Aligned_cols=184  Identities=14%  Similarity=0.179  Sum_probs=160.5

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEE---EeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVF---KGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~---~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      |++.+.|...|.|-+|++. .+-....+   ..|+++|+.++... +..+++++.+|.+++||..+...+..+. ....+
T Consensus       460 GNF~~IG~S~G~Id~fNmQ-SGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~-l~~~~  537 (910)
T KOG1539|consen  460 GNFVFIGYSKGTIDRFNMQ-SGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLR-LGSSI  537 (910)
T ss_pred             CceEEEeccCCeEEEEEcc-cCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeec-cCCCc
Confidence            6788899999999999998 67666777   58999999999875 6679999999999999998888776664 45678


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      .++..+.....++.+..|-.|.++|..+.+.++.             +.+|.+.|+.++|||||++|++++.|++|++||
T Consensus       538 ~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~-------------f~gh~nritd~~FS~DgrWlisasmD~tIr~wD  604 (910)
T KOG1539|consen  538 TGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVRE-------------FWGHGNRITDMTFSPDGRWLISASMDSTIRTWD  604 (910)
T ss_pred             ceeeeeehhhhhhhhcCceeEEEEEchhhhhhHH-------------hhccccceeeeEeCCCCcEEEEeecCCcEEEEe
Confidence            8888988888999999999999999988777665             489999999999999999999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-CeEEEEECC
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-GIIKIYVIP  217 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iw~~~  217 (221)
                      +.++..+..+.                -+.++.++.|+|+|.+||+...| .-|++|.-.
T Consensus       605 lpt~~lID~~~----------------vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNk  648 (910)
T KOG1539|consen  605 LPTGTLIDGLL----------------VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK  648 (910)
T ss_pred             ccCcceeeeEe----------------cCCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence            99999887774                34578899999999999999887 679999643

>KOG0270|consensus

Probab=99.92  E-value=3.3e-23  Score=147.34  Aligned_cols=190  Identities=13%  Similarity=0.141  Sum_probs=146.6

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      .+.||+|+.|.+|++||+. ++++..++..|.+.|.+++|+|  ...|++|+.|++|.+.|.+........-...+.|-.
T Consensus       256 ~nVLaSgsaD~TV~lWD~~-~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEk  334 (463)
T KOG0270|consen  256 RNVLASGSADKTVKLWDVD-TGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEK  334 (463)
T ss_pred             ceeEEecCCCceEEEEEcC-CCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEE
Confidence            3689999999999999998 8999999999999999999997  466999999999999999864333222234678999


Q ss_pred             EEEeCCCC-EEEEecCCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEE
Q psy10662         81 VGLATDGD-YVACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIY  157 (221)
Q Consensus        81 ~~~~~~~~-~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~  157 (221)
                      ++|.|... .++++..||+|+-+|+|.. +++.+             +..|..+|.++++++ ...++++++.|+.|++|
T Consensus       335 v~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt-------------~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw  401 (463)
T KOG0270|consen  335 VAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWT-------------LKAHDDEISGLSVNIQTPGLLSTASTDKVVKLW  401 (463)
T ss_pred             EEecCCCceeEEEecCCceEEeeecCCCCCceeE-------------EEeccCCcceEEecCCCCcceeeccccceEEEE
Confidence            99998775 5788889999999999875 55544             589999999999986 45588999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC-cEEEEecCCCeEEEEECCcc
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++..........           +.  -.-+...+.++.|+- -+|+.|+..+.+++||+.+.
T Consensus       402 ~~~~~~~~~v~~-----------~~--~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~  451 (463)
T KOG0270|consen  402 KFDVDSPKSVKE-----------HS--FKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTN  451 (463)
T ss_pred             eecCCCCccccc-----------cc--ccccceeecccCCCcceEEEecCccceEEEeecccC
Confidence            986543321110           00  001124456667754 45677777888999998764

>KOG2106|consensus

Probab=99.92  E-value=1e-22  Score=147.35  Aligned_cols=192  Identities=16%  Similarity=0.208  Sum_probs=148.7

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccc----------------
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL----------------   68 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~----------------   68 (221)
                      -++||..+|.|.||+.. +.+..+...+|.+.|.+++...++.|++|+.|+.|..||- .-+.+                
T Consensus       259 dviTgDS~G~i~Iw~~~-~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~-~y~k~r~~elPe~~G~iRtv~  336 (626)
T KOG2106|consen  259 DVITGDSGGNILIWSKG-TNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDD-NYRKLRETELPEQFGPIRTVA  336 (626)
T ss_pred             CEEeecCCceEEEEeCC-CceEEeEeeecCCceEEEEEecCccEeecCccceEEeccc-cccccccccCchhcCCeeEEe
Confidence            46799999999999997 6666666669999999999999999999999999999993 11100                


Q ss_pred             -------------------------eeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------
Q psy10662         69 -------------------------RSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------  114 (221)
Q Consensus        69 -------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------  114 (221)
                                               ....+|......++.+|+.+.+++++.|+.+++|+  ..+...+..         
T Consensus       337 e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~  414 (626)
T KOG2106|consen  337 EGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECAD  414 (626)
T ss_pred             cCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEee
Confidence                                     01126777889999999999999999999999998  333333222         


Q ss_pred             ------------------eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccc
Q psy10662        115 ------------------FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM  176 (221)
Q Consensus       115 ------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~  176 (221)
                                        ++..+...+..... ..++++++|+|+|.+||.|+.|+.|++|.+.........        
T Consensus       415 fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r--------  485 (626)
T KOG2106|consen  415 FHPSGVVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSR--------  485 (626)
T ss_pred             ccCcceEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEE--------
Confidence                              22233222222223 778999999999999999999999999988765543322        


Q ss_pred             ccccccccccccceeEEEEcCCCcEEEEecCCCeEEEE
Q psy10662        177 LERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIY  214 (221)
Q Consensus       177 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  214 (221)
                         ....  +.++|+.+.|++|+++|.+.+.|-.|..|
T Consensus       486 ---~~k~--~gs~ithLDwS~Ds~~~~~~S~d~eiLyW  518 (626)
T KOG2106|consen  486 ---VGKC--SGSPITHLDWSSDSQFLVSNSGDYEILYW  518 (626)
T ss_pred             ---eeee--cCceeEEeeecCCCceEEeccCceEEEEE
Confidence               2222  23789999999999999999999999999

>KOG4283|consensus

Probab=99.92  E-value=1.3e-23  Score=142.83  Aligned_cols=213  Identities=14%  Similarity=0.168  Sum_probs=159.3

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec----CCcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN----KEDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |..++.+++.|.+++|||.. +.+....|+ .++.|.+-+++|    ...+++|..|-.|++.|+.+|.....+.+|.+.
T Consensus       113 DtGmFtssSFDhtlKVWDtn-TlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~  190 (397)
T KOG4283|consen  113 DTGMFTSSSFDHTLKVWDTN-TLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDG  190 (397)
T ss_pred             cCceeecccccceEEEeecc-cceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCc
Confidence            45678899999999999997 666666676 678899989987    223677888899999999999999999999999


Q ss_pred             eeEEEEeCCCCE-EEEecCCCeEEEEECCCC-eeeEEEEeec-ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         78 KNFVGLATDGDY-VACGSENNSLYIYYKGLS-KHMHAYRFDT-VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        78 v~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      |.++.|+|..++ |++|+.||.|++||++.. .+...+.... ...+..+.-..|.+.+..++|..++.++++++.|..+
T Consensus       191 vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~  270 (397)
T KOG4283|consen  191 VLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRI  270 (397)
T ss_pred             eEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccce
Confidence            999999999886 689999999999999876 5555553322 2334444567899999999999999999999999999


Q ss_pred             EEEEcCCCCceee-ee-----------e-------------ecccc-------cccccccccccccceeEEEEcCCCcEE
Q psy10662        155 YIYYKGLSKHMHA-YR-----------F-------------DTVRS-------MLERDRNEDDTNEFVSAVCWRQLSRVL  202 (221)
Q Consensus       155 ~~~d~~~~~~~~~-~~-----------~-------------~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l  202 (221)
                      ++|+...++.... +.           +             .....       ....+..+..|...|.+..+-|+=+.+
T Consensus       271 r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~  350 (397)
T KOG4283|consen  271 RVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQC  350 (397)
T ss_pred             EEeecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhh
Confidence            9999876653211 00           0             00000       001122234555666777777776777


Q ss_pred             EEecCCCeEEEEEC
Q psy10662        203 VAANSQGIIKIYVI  216 (221)
Q Consensus       203 ~~~~~dg~i~iw~~  216 (221)
                      .++..|+.|..|-.
T Consensus       351 ~tg~~d~ni~~w~p  364 (397)
T KOG4283|consen  351 FTGDMNGNIYMWSP  364 (397)
T ss_pred             hccccCCccccccc
Confidence            77777777777754

>KOG0303|consensus

Probab=99.92  E-value=4.9e-23  Score=144.80  Aligned_cols=190  Identities=16%  Similarity=0.252  Sum_probs=152.3

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc------eeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeec
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK------EALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~------~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      |.+.||+|+.|-+|.||.+...+      +++..+.+|...|--++|+|  .+.|++++.|.+|.+||+.+++.+..+. 
T Consensus        93 nD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-  171 (472)
T KOG0303|consen   93 NDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-  171 (472)
T ss_pred             CCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-
Confidence            56889999999999999987432      56788999999999999998  5779999999999999999999988887 


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC-ceEEEEEecCCCEEEEec---
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN-DKNFVGLATDGDYVACGS---  149 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~---  149 (221)
                      |...|+++.|+.+|.++++++.|..|+|||.++++.+..-             .+|.+ ....+.|-.++.++.+|.   
T Consensus       172 hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~-------------~~heG~k~~Raifl~~g~i~tTGfsr~  238 (472)
T KOG0303|consen  172 HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEG-------------VAHEGAKPARAIFLASGKIFTTGFSRM  238 (472)
T ss_pred             CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeec-------------ccccCCCcceeEEeccCceeeeccccc
Confidence            9999999999999999999999999999999999887653             34443 344566788888555554   


Q ss_pred             CCCeEEEEEcCCCCce-eeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCcc
Q psy10662        150 ENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIR  219 (221)
Q Consensus       150 ~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~  219 (221)
                      .++.+.+||...-+.. .....              ..+..|.---|.||.++++.++ .|+.|+.|++...
T Consensus       239 seRq~aLwdp~nl~eP~~~~el--------------DtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d  296 (472)
T KOG0303|consen  239 SERQIALWDPNNLEEPIALQEL--------------DTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNE  296 (472)
T ss_pred             cccceeccCcccccCcceeEEe--------------ccCCceEEeeecCCCCEEEEEecCCcceEEEEecCC
Confidence            4688999986544322 11111              2344566677899988887766 6999999998754

>KOG2096|consensus

Probab=99.92  E-value=4.7e-23  Score=141.48  Aligned_cols=194  Identities=16%  Similarity=0.200  Sum_probs=142.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc-----eeeEEEEeccCceEEEEEecCC--cEEEecCCCcEEEEEcCCCc---ccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK-----EALAVFKGHRKAVSYVKFLNKE--DIVSASTDSQLKLWNINKPN---CLRS   70 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~---~~~~   70 (221)
                      +||+.||+++.|+.|++|+++ ..     +.++. ...-+-.+.+.|.|+-  .++++-...++++|.+...+   ....
T Consensus        96 SdGK~lat~~~Dr~Ir~w~~~-DF~~~eHr~~R~-nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~  173 (420)
T KOG2096|consen   96 SDGKKLATISGDRSIRLWDVR-DFENKEHRCIRQ-NVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHH  173 (420)
T ss_pred             CCCceeEEEeCCceEEEEecc-hhhhhhhhHhhc-cccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcc
Confidence            489999999999999999987 21     11111 1112356889999864  36677778899999875321   1110


Q ss_pred             --------e-eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662         71 --------F-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD  141 (221)
Q Consensus        71 --------~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  141 (221)
                              + +.|.-.+..+-...++.++++++.|..|.+|+++ ++.+..+             .......+..+.+|+
T Consensus       174 ~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~i-------------dtnq~~n~~aavSP~  239 (420)
T KOG2096|consen  174 FVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSI-------------DTNQSSNYDAAVSPD  239 (420)
T ss_pred             cccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeee-------------ccccccccceeeCCC
Confidence                    1 2345566677777788899999999999999998 7766554             333344567889999


Q ss_pred             CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        142 GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       142 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      |+++++++..--|++|..--.+       +..-+.......+.+|...|..++|+++.+.+++.|.||++++||.+
T Consensus       240 GRFia~~gFTpDVkVwE~~f~k-------dG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd  308 (420)
T KOG2096|consen  240 GRFIAVSGFTPDVKVWEPIFTK-------DGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD  308 (420)
T ss_pred             CcEEEEecCCCCceEEEEEecc-------CcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence            9999999999999999752111       11122333455678999999999999999999999999999999986

>KOG1007|consensus

Probab=99.92  E-value=5e-23  Score=139.52  Aligned_cols=204  Identities=15%  Similarity=0.204  Sum_probs=155.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEE-----eccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceee-e
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK-----GHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSF-V   72 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-----~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~-~   72 (221)
                      ||+..|++-. |..|.+|++.+..+.+..+.     +|....++-+|+|  ++.-+....|+++..||+++.+....+ .
T Consensus       133 Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D~RT~~~~~sI~d  211 (370)
T KOG1007|consen  133 PNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWDLRTMKKNNSIED  211 (370)
T ss_pred             CCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEEEEEccchhhhcchhh
Confidence            6788888764 88999999985555344432     2456788889997  556666677999999999998877766 5


Q ss_pred             ccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecC
Q psy10662         73 GHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSE  150 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  150 (221)
                      .|...|..+.|+|+.+ +|++++.||.|++||.+..+.            ++..+.+|...|.++.|+| -.++|++|+.
T Consensus       212 AHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~------------pv~el~~HsHWvW~VRfn~~hdqLiLs~~S  279 (370)
T KOG1007|consen  212 AHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKF------------PVQELPGHSHWVWAVRFNPEHDQLILSGGS  279 (370)
T ss_pred             hhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCc------------cccccCCCceEEEEEEecCccceEEEecCC
Confidence            6788899999999987 578999999999999986543            3345689999999999998 4568899999


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccc---------c-----ccccccccccccceeEEEEcCCC-cEEEEecCCCeEEEEE
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRS---------M-----LERDRNEDDTNEFVSAVCWRQLS-RVLVAANSQGIIKIYV  215 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~---------~-----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~  215 (221)
                      |..|.+|...+-.....+.+.....         .     -..+..+..|+..|++++||.-. -.+|+-+.||++.|=.
T Consensus       280 Ds~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~  359 (370)
T KOG1007|consen  280 DSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISS  359 (370)
T ss_pred             CceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeec
Confidence            9999999887655444444332111         1     11234567899999999998854 4567889999998877


Q ss_pred             CC
Q psy10662        216 IP  217 (221)
Q Consensus       216 ~~  217 (221)
                      ++
T Consensus       360 V~  361 (370)
T KOG1007|consen  360 VP  361 (370)
T ss_pred             CC
Confidence            65

>KOG0647|consensus

Probab=99.92  E-value=5.4e-23  Score=139.90  Aligned_cols=186  Identities=15%  Similarity=0.212  Sum_probs=134.3

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCccceeee------
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPNCLRSFV------   72 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~~~~~~------   72 (221)
                      ||..+++|+.|+.+++||+. ++ .+..+..|.++|.++.|-++   ..|+||+.|.+|+.||++...++..+.      
T Consensus        83 dgskVf~g~~Dk~~k~wDL~-S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvY  160 (347)
T KOG0647|consen   83 DGSKVFSGGCDKQAKLWDLA-SG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVY  160 (347)
T ss_pred             CCceEEeeccCCceEEEEcc-CC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceee
Confidence            68899999999999999998 55 45677889999999999853   348999999999999998776554432      


Q ss_pred             -------------------------------cc----ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeec
Q psy10662         73 -------------------------------GH----INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDT  117 (221)
Q Consensus        73 -------------------------------~~----~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  117 (221)
                                                     .+    +-.+.|++..++.+..+.|+-+|.+-|..+..+.+...+.|..
T Consensus       161 a~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkC  240 (347)
T KOG0647|consen  161 AADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKC  240 (347)
T ss_pred             ehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEE
Confidence                                           11    1235677777777767777777777777776653333332211


Q ss_pred             ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC
Q psy10662        118 VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ  197 (221)
Q Consensus       118 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  197 (221)
                      .+..-.  ....-..|++++|+|.-..|++.+.||++.+||.+....+...               +.|..+|++++|+.
T Consensus       241 HR~~~~--~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s---------------~~~~qpItcc~fn~  303 (347)
T KOG0647|consen  241 HRSTNS--VNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTS---------------ETHPQPITCCSFNR  303 (347)
T ss_pred             eccCCC--CCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhcc---------------CcCCCccceeEecC
Confidence            111000  0011235778999999999999999999999997655444333               36888999999999


Q ss_pred             CCcEEEEec
Q psy10662        198 LSRVLVAAN  206 (221)
Q Consensus       198 ~~~~l~~~~  206 (221)
                      +|.+++-+.
T Consensus       304 ~G~ifaYA~  312 (347)
T KOG0647|consen  304 NGSIFAYAL  312 (347)
T ss_pred             CCCEEEEEe
Confidence            999987653

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.91  E-value=1.3e-21  Score=141.83  Aligned_cols=185  Identities=11%  Similarity=0.097  Sum_probs=138.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      ++++++++.|+.|++||+. +++.+..+..+. .+.+++|+|++. + ++++.++.|++||..+++....+..+.. +..
T Consensus         1 ~~~~~s~~~d~~v~~~d~~-t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~   77 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTA-TLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PEL   77 (300)
T ss_pred             CcEEEEecCCCEEEEEECC-CCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccE
Confidence            4678899999999999997 677777777554 467899998654 4 5677899999999998887766654433 567


Q ss_pred             EEEeCCCCEEEE-ecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-eEEEEE
Q psy10662         81 VGLATDGDYVAC-GSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-SLYIYY  158 (221)
Q Consensus        81 ~~~~~~~~~l~~-~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d  158 (221)
                      ++|+|+++.+++ ++.++.+.+||+++.+.+..+             . ....+..++|+|++++++++..++ .+.+||
T Consensus        78 ~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~-------------~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d  143 (300)
T TIGR03866        78 FALHPNGKILYIANEDDNLVTVIDIETRKVLAEI-------------P-VGVEPEGMAVSPDGKIVVNTSETTNMAHFID  143 (300)
T ss_pred             EEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEe-------------e-CCCCcceEEECCCCCEEEEEecCCCeEEEEe
Confidence            899999997654 456899999999887665443             1 123457799999999999888765 567788


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~  220 (221)
                      ..+.+......                ....+..++|+|++++|+.++ .++.|++||+.+++
T Consensus       144 ~~~~~~~~~~~----------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~  190 (300)
T TIGR03866       144 TKTYEIVDNVL----------------VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRK  190 (300)
T ss_pred             CCCCeEEEEEE----------------cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcce
Confidence            87665433221                112346789999999886554 69999999998764

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0639|consensus

Probab=99.91  E-value=8.6e-24  Score=153.01  Aligned_cols=202  Identities=11%  Similarity=0.253  Sum_probs=156.5

Q ss_pred             ceEEEEeCCCeEEEEEecCCc--eeeEEEEe--ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccc--eeeecccc
Q psy10662          4 CHLAFGSADHCVHYYDLRNTK--EALAVFKG--HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCL--RSFVGHIN   76 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~--~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~--~~~~~~~~   76 (221)
                      +++.|| ..|.|+|||+...+  .++..+..  ....|.++...|+ ..|++|+.-.++.|||+....+.  ..+.....
T Consensus       432 rhVyTg-GkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssap  510 (705)
T KOG0639|consen  432 RHVYTG-GKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP  510 (705)
T ss_pred             ceeEec-CCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcch
Confidence            456666 46789999997432  23333322  3456888888874 55999999999999999876443  23333334


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      .++.++.+||.+..+++..||.|.|||+.....++.             +.+|...+.||.++++|..|.+|+-|.+|+.
T Consensus       511 aCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrq-------------fqGhtDGascIdis~dGtklWTGGlDntvRc  577 (705)
T KOG0639|consen  511 ACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQ-------------FQGHTDGASCIDISKDGTKLWTGGLDNTVRC  577 (705)
T ss_pred             hhhhhhcCCccceeeeeccCCcEEEEEcccceeeec-------------ccCCCCCceeEEecCCCceeecCCCccceee
Confidence            678899999999999999999999999987766655             5899999999999999999999999999999


Q ss_pred             EEcCCCCceeeeeeecc---------ccc---------c-------cccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662        157 YYKGLSKHMHAYRFDTV---------RSM---------L-------ERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~---------~~~---------~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  211 (221)
                      ||++++..+...+|...         +..         .       .....+.-|+..|.++.|.+.|+++++.+.|+.+
T Consensus       578 WDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlL  657 (705)
T KOG0639|consen  578 WDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLL  657 (705)
T ss_pred             hhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhh
Confidence            99999988777665431         000         0       0112234678899999999999999999999999


Q ss_pred             EEEECCcc
Q psy10662        212 KIYVIPIR  219 (221)
Q Consensus       212 ~iw~~~~~  219 (221)
                      ..|..+-|
T Consensus       658 nawrtPyG  665 (705)
T KOG0639|consen  658 NAWRTPYG  665 (705)
T ss_pred             hhccCccc
Confidence            99998754

>KOG0299|consensus

Probab=99.91  E-value=3.1e-23  Score=148.05  Aligned_cols=190  Identities=13%  Similarity=0.207  Sum_probs=157.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCcee----------------eEEE-EeccCceEEEEEec-CCcEEEecCCCcEEEEEc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEA----------------LAVF-KGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNI   62 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~----------------~~~~-~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~   62 (221)
                      ||..+..+++.+|+|.-|++....+.                .+.- +.|...+.+++.++ +.+|++|+.|..|.||+.
T Consensus       152 ~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~  231 (479)
T KOG0299|consen  152 PDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDRHVQIWDC  231 (479)
T ss_pred             ccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCceEEEecC
Confidence            57889999999999999998732211                0111 26788899999997 566999999999999999


Q ss_pred             CCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         63 NKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        63 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                      ++.+.++.+.+|.+.|.+++|-.....+++++.|+.|++|++.....+.+             +.+|...|..+....-+
T Consensus       232 ~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vet-------------lyGHqd~v~~IdaL~re  298 (479)
T KOG0299|consen  232 DTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVET-------------LYGHQDGVLGIDALSRE  298 (479)
T ss_pred             cccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHH-------------HhCCccceeeechhccc
Confidence            99999999999999999999988778899999999999999876655443             58999999999998888


Q ss_pred             CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        143 DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.+.+|+.|+++++|++.....+                .+.++...+-+++|-.+ ..+++|+.||.|.+|++...+
T Consensus       299 R~vtVGgrDrT~rlwKi~eesql----------------ifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKk  359 (479)
T KOG0299|consen  299 RCVTVGGRDRTVRLWKIPEESQL----------------IFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKK  359 (479)
T ss_pred             ceEEeccccceeEEEecccccee----------------eeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccC
Confidence            99999999999999998443322                12256778899999754 679999999999999987654

>KOG4328|consensus

Probab=99.91  E-value=2.7e-23  Score=148.39  Aligned_cols=192  Identities=14%  Similarity=0.107  Sum_probs=150.7

Q ss_pred             CceEEEEeCCCeEEEEEec---CCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCcc--ceeeeccc
Q psy10662          3 SCHLAFGSADHCVHYYDLR---NTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNC--LRSFVGHI   75 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~---~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~--~~~~~~~~   75 (221)
                      -+++|+|+.-|.|-+||+.   .....+..+..|..+|.+|.|+|  ..++++.+.||+|+.-|+++...  +.......
T Consensus       200 ~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~  279 (498)
T KOG4328|consen  200 RKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDN  279 (498)
T ss_pred             ceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccc
Confidence            3689999999999999994   23445677888999999999997  45699999999999999987643  33333344


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEecCCCeE
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACGSENNSL  154 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i  154 (221)
                      .....+.|+.+...++.+..=|...+||+++.+.-..            .+.-|...|+.++++|. ..+|++++.|+++
T Consensus       280 ~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~------------~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~  347 (498)
T KOG4328|consen  280 IWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYE------------NLRLHKKKITSVALNPVCPWFLATASLDQTA  347 (498)
T ss_pred             eeeeeccccCCCccEEEeecccceEEEEeecCCccch------------hhhhhhcccceeecCCCCchheeecccCcce
Confidence            5677888888888888888778999999987665221            23556779999999995 4578999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +|||++.-.....           +....-.|...|.++.|||.+-.|++.+.|..|+|||..
T Consensus       348 kIWD~R~l~~K~s-----------p~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss  399 (498)
T KOG4328|consen  348 KIWDLRQLRGKAS-----------PFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS  399 (498)
T ss_pred             eeeehhhhcCCCC-----------cceecccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence            9999986543221           111223688899999999988889999999999999973

>KOG0293|consensus

Probab=99.91  E-value=1.5e-23  Score=148.20  Aligned_cols=168  Identities=15%  Similarity=0.231  Sum_probs=139.7

Q ss_pred             eeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCc---cceeeeccccceeEEEEeCCCCEEEEecCCCeEE
Q psy10662         25 EALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPN---CLRSFVGHINDKNFVGLATDGDYVACGSENNSLY  100 (221)
Q Consensus        25 ~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~  100 (221)
                      +..+.+..|.+.|+-+.|++ +.+||+++.|.+..+|++....   ..+++.+|..+|..+.|+||.+++++++.+..+.
T Consensus       215 qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~  294 (519)
T KOG0293|consen  215 QTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLS  294 (519)
T ss_pred             hhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHhee
Confidence            34566788999999999996 6679999999999999986543   4677889999999999999999999999999999


Q ss_pred             EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccc
Q psy10662        101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERD  180 (221)
Q Consensus       101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~  180 (221)
                      +||..++.....+            -.++...+.+++|.|||..+++|+.|+.+..||++... ...++           
T Consensus       295 lwDv~tgd~~~~y------------~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-~~~W~-----------  350 (519)
T KOG0293|consen  295 LWDVDTGDLRHLY------------PSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-LGNWE-----------  350 (519)
T ss_pred             eccCCcchhhhhc------------ccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-hhccc-----------
Confidence            9999999887654            12345789999999999999999999999999986433 11111           


Q ss_pred             ccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        181 RNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       181 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                       .  .....|.+++.++||+++++.+.|..|++++..++
T Consensus       351 -g--vr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~  386 (519)
T KOG0293|consen  351 -G--VRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREAR  386 (519)
T ss_pred             -c--cccceeEEEEEcCCCcEEEEEecccceeeechhhh
Confidence             1  12246899999999999999999999999998764

>KOG0300|consensus

Probab=99.91  E-value=5.6e-23  Score=141.30  Aligned_cols=191  Identities=17%  Similarity=0.279  Sum_probs=158.3

Q ss_pred             CCCceEEEEeCCCeEEEEEe------cC-----------------------------C----ceeeEEEEeccCceEEEE
Q psy10662          1 MNSCHLAFGSADHCVHYYDL------RN-----------------------------T----KEALAVFKGHRKAVSYVK   41 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~------~~-----------------------------~----~~~~~~~~~~~~~i~~~~   41 (221)
                      +.+.++++++.|++-.||..      ..                             .    .-++..+.+|.+.|.+..
T Consensus       200 ~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~d  279 (481)
T KOG0300|consen  200 NSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACD  279 (481)
T ss_pred             cccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehh
Confidence            35778999999999999962      10                             0    124567888999999999


Q ss_pred             Eec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccc
Q psy10662         42 FLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS  120 (221)
Q Consensus        42 ~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  120 (221)
                      |.. ++++++++.|.+..+||+++++.+..+.+|....+.++-+|..+++++.+.|.+.++||++..  +.         
T Consensus       280 WL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRea--I~---------  348 (481)
T KOG0300|consen  280 WLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREA--IQ---------  348 (481)
T ss_pred             hhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhh--cc---------
Confidence            985 677999999999999999999999999999999999999999999999999999999999832  22         


Q ss_pred             eeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC-ceeeeeeecccccccccccccccccceeEEEEcCCC
Q psy10662        121 MLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK-HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       121 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  199 (221)
                       .+..|.+|...|+++.|..+. .+++|+.|.+|++||+++.. ++..+.                ...+++.++.+..+
T Consensus       349 -sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIR----------------tdS~~NRvavs~g~  410 (481)
T KOG0300|consen  349 -SVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIR----------------TDSPANRVAVSKGH  410 (481)
T ss_pred             -eeeeecccccceeEEEEecCC-ceeecCCCceEEEeeeccccCcceeee----------------cCCccceeEeecCC
Confidence             224578999999999998765 58899999999999997643 333332                35678899999888


Q ss_pred             cEEEEecCCCeEEEEECCccc
Q psy10662        200 RVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       200 ~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ..++.--.+..|++||+....
T Consensus       411 ~iIAiPhDNRqvRlfDlnG~R  431 (481)
T KOG0300|consen  411 PIIAIPHDNRQVRLFDLNGNR  431 (481)
T ss_pred             ceEEeccCCceEEEEecCCCc
Confidence            899999889999999997644

>KOG0641|consensus

Probab=99.91  E-value=8.1e-22  Score=129.72  Aligned_cols=190  Identities=14%  Similarity=0.222  Sum_probs=152.9

Q ss_pred             CceEEEEe-CCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec--c-----
Q psy10662          3 SCHLAFGS-ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG--H-----   74 (221)
Q Consensus         3 ~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~--~-----   74 (221)
                      +.+|++++ .|-.|++-|.. .++..+.+.+|.+.|.++---++-.+++|+.|.+|++||++-..++..+..  |     
T Consensus       152 ~~il~s~gagdc~iy~tdc~-~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~gle  230 (350)
T KOG0641|consen  152 GAILASAGAGDCKIYITDCG-RGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLE  230 (350)
T ss_pred             ceEEEecCCCcceEEEeecC-CCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcc
Confidence            44566653 35566666776 788899999999999887544677899999999999999998888776531  2     


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      .+.|.+++..|.|+++++|-.|....+||++.+.+++.+             ..|...|.++.|+|...++++++.|..|
T Consensus       231 ssavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f-------------~phsadir~vrfsp~a~yllt~syd~~i  297 (350)
T KOG0641|consen  231 SSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRF-------------HPHSADIRCVRFSPGAHYLLTCSYDMKI  297 (350)
T ss_pred             cceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeee-------------CCCccceeEEEeCCCceEEEEecccceE
Confidence            257899999999999999999999999999998887764             7899999999999999999999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ++-|++-.- ...+          +......|...+..+.|+|..--+++.+.|.+..+|-++
T Consensus       298 kltdlqgdl-a~el----------~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  298 KLTDLQGDL-AHEL----------PIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             EEeecccch-hhcC----------ceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            999985321 1111          011122567778889999999889999999999999875

>KOG0321|consensus

Probab=99.91  E-value=3.7e-23  Score=153.19  Aligned_cols=212  Identities=14%  Similarity=0.128  Sum_probs=150.4

Q ss_pred             CceEEEEeCCCeEEEEEecCCc-----eeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCcccee--eecc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTK-----EALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRS--FVGH   74 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~--~~~~   74 (221)
                      ...|+.+.+||.|.++|.....     ..+..+..|...|..+.|.|+. .|++++.|.++++||+++.+++..  +.+|
T Consensus        64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH  143 (720)
T KOG0321|consen   64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGH  143 (720)
T ss_pred             cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeeccc
Confidence            4579999999999999986321     1245567899999999999854 489999999999999999888766  7899


Q ss_pred             ccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEe--------ec---cc---ceeEeeEEEeeCceEE---E
Q psy10662         75 INDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRF--------DT---VR---SMLESSFVGHINDKNF---V  136 (221)
Q Consensus        75 ~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~--------~~---~~---~~~~~~~~~~~~~v~~---~  136 (221)
                      ...|.+++|+|... .|++|+.||.|.|||++....-..-.+        ..   ..   .+.+.....+...+.+   +
T Consensus       144 ~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTv  223 (720)
T KOG0321|consen  144 TGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTV  223 (720)
T ss_pred             ccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEE
Confidence            99999999999765 689999999999999875541110000        00   00   0111222334444444   4


Q ss_pred             EEecCCCEEEEecC-CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        137 GLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       137 ~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      .+..|...||+++. |+.|+|||++..........    ...............+.++..+..|.+|++.+.|+.|++|+
T Consensus       224 v~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep----~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~yn  299 (720)
T KOG0321|consen  224 VLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEP----RGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYN  299 (720)
T ss_pred             EEEeccceeeeccCCCcceEEEeecccccccccCC----CcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEe
Confidence            45567788888887 99999999987655433221    11111111112244577888888899999988999999999


Q ss_pred             CCc
Q psy10662        216 IPI  218 (221)
Q Consensus       216 ~~~  218 (221)
                      +.+
T Consensus       300 m~s  302 (720)
T KOG0321|consen  300 MRS  302 (720)
T ss_pred             ccc
Confidence            975

>KOG1273|consensus

Probab=99.91  E-value=3.8e-22  Score=136.83  Aligned_cols=167  Identities=14%  Similarity=0.267  Sum_probs=136.0

Q ss_pred             eEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe
Q psy10662         37 VSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  115 (221)
Q Consensus        37 i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  115 (221)
                      ..|+.|++ +.+|+.|+.||.|.+||+.+...-+.+.+|..+|++++|+++|++|++++.|..|.+||+..+.+++.+.|
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf  105 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF  105 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence            78999997 67799999999999999999888888999999999999999999999999999999999999999998875


Q ss_pred             eccc----------ceeEeeEEE------------e-----------eCceEEEEEecCCCEEEEecCCCeEEEEEcCCC
Q psy10662        116 DTVR----------SMLESSFVG------------H-----------INDKNFVGLATDGDYVACGSENNSLYIYYKGLS  162 (221)
Q Consensus       116 ~~~~----------~~~~~~~~~------------~-----------~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~  162 (221)
                      +..-          +..+.....            |           +....+..|.+.|++|++|...|.+.++|..+.
T Consensus       106 ~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~  185 (405)
T KOG1273|consen  106 DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL  185 (405)
T ss_pred             cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence            4311          111111000            0           001112247788999999999999999999999


Q ss_pred             CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        163 KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +++..++...              ...|..+-|+..|+.|+..+.|..||.|+++
T Consensus       186 e~vas~rits--------------~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~  226 (405)
T KOG1273|consen  186 ECVASFRITS--------------VQAIKQIIVSRKGRFLIINTSDRVIRTYEIS  226 (405)
T ss_pred             eeeeeeeech--------------heeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence            8887775322              2568899999999999999999999999986

>KOG0642|consensus

Probab=99.91  E-value=9.6e-23  Score=148.94  Aligned_cols=202  Identities=15%  Similarity=0.238  Sum_probs=157.1

Q ss_pred             CCceEEEEeCCCeEEEEEecC-------CceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC--------
Q psy10662          2 NSCHLAFGSADHCVHYYDLRN-------TKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP--------   65 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~-------~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~--------   65 (221)
                      ....|++|+.||.|.+|++..       .-+++.+|.+|+++|.|+++.+ +.++++|+.||+|+.|++...        
T Consensus       305 sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~d  384 (577)
T KOG0642|consen  305 SEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYD  384 (577)
T ss_pred             CCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccC
Confidence            346799999999999999931       1367889999999999999985 667999999999999976421        


Q ss_pred             --ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE----------eeccc--------------
Q psy10662         66 --NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR----------FDTVR--------------  119 (221)
Q Consensus        66 --~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------~~~~~--------------  119 (221)
                        .....+.+|.+.++.+++++....|++++.||+++.|+.....+ .++.          ++...              
T Consensus       385 p~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~  463 (577)
T KOG0642|consen  385 PSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGY  463 (577)
T ss_pred             cchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhccccc
Confidence              22345679999999999999999999999999999998766555 1111          00000              


Q ss_pred             --------ceeEeeEE-------EeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccc
Q psy10662        120 --------SMLESSFV-------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED  184 (221)
Q Consensus       120 --------~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (221)
                              ......+.       .....+..+.++|...+.+++.+|+.|+++|..+++.+....               
T Consensus       464 ~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~---------------  528 (577)
T KOG0642|consen  464 TSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMV---------------  528 (577)
T ss_pred             ccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchhee---------------
Confidence                    00001111       112345667888999999999999999999999888776554               


Q ss_pred             ccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        185 DTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       185 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .|...++++++.|+|-+|++++.|+.+++|.+..+
T Consensus       529 a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k  563 (577)
T KOG0642|consen  529 AHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVK  563 (577)
T ss_pred             eccceecceeecCCCceEEeecCCceeehhhccch
Confidence            57778999999999999999999999999998653

>KOG1188|consensus

Probab=99.90  E-value=2.7e-22  Score=138.60  Aligned_cols=191  Identities=17%  Similarity=0.285  Sum_probs=149.9

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--C-CcEEEecCCCcEEEEEcCCCccceee--eccc-cc
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--K-EDIVSASTDSQLKLWNINKPNCLRSF--VGHI-ND   77 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~l~s~~~d~~v~~wd~~~~~~~~~~--~~~~-~~   77 (221)
                      ..+|++...|.|++||.. +++.+..+++++..+..++|..  + ..+.+|+.||+|++||++.......+  ..+. .+
T Consensus        41 ~~vav~lSngsv~lyd~~-tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~  119 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKG-TGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTP  119 (376)
T ss_pred             eeEEEEecCCeEEEEecc-chhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCc
Confidence            468899999999999998 6888999999999999999985  2 34889999999999999986554433  3444 35


Q ss_pred             eeEEEEeCCCCEEEEecC----CCeEEEEECCCCee-eEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCC
Q psy10662         78 KNFVGLATDGDYVACGSE----NNSLYIYYKGLSKH-MHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSEN  151 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~----d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d  151 (221)
                      -.+++.+.+++.+++|.+    +-.|.+||++..+. +..+            ...|...|+++.|+| +.++|++|+.|
T Consensus       120 f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~------------~eSH~DDVT~lrFHP~~pnlLlSGSvD  187 (376)
T KOG1188|consen  120 FICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQL------------NESHNDDVTQLRFHPSDPNLLLSGSVD  187 (376)
T ss_pred             ceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhh------------hhhccCcceeEEecCCCCCeEEeeccc
Confidence            667777767778888764    56899999998766 4443            468999999999999 66799999999


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC-cEEEEecCCCeEEEEECCcc
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~  219 (221)
                      |.|.+||+........            +...-.+...|..+.|..++ +.|.+-+..+...+|+++.+
T Consensus       188 GLvnlfD~~~d~EeDa------------L~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~  244 (376)
T KOG1188|consen  188 GLVNLFDTKKDNEEDA------------LLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDG  244 (376)
T ss_pred             ceEEeeecCCCcchhh------------HHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCC
Confidence            9999999865422111            11112466779999999877 45888888999999999765

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.90  E-value=1.8e-20  Score=135.90  Aligned_cols=201  Identities=11%  Similarity=0.081  Sum_probs=130.2

Q ss_pred             CCCceE-EEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EE-EecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHL-AFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IV-SASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |++..+ ++++.++.|++||.. +++....+..+.. +..++|+|++. ++ +++.++.+++||+++.+.+..+. +...
T Consensus        40 ~dg~~l~~~~~~~~~v~~~d~~-~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~-~~~~  116 (300)
T TIGR03866        40 KDGKLLYVCASDSDTIQVIDLA-TGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP-VGVE  116 (300)
T ss_pred             CCCCEEEEEECCCCeEEEEECC-CCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee-CCCC
Confidence            567765 667788999999998 5666666654433 56788987554 54 45568999999998877665554 2233


Q ss_pred             eeEEEEeCCCCEEEEecCCC-eEEEEECCCCeeeEEEE---------e--------------------ecccceeEeeEE
Q psy10662         78 KNFVGLATDGDYVACGSENN-SLYIYYKGLSKHMHAYR---------F--------------------DTVRSMLESSFV  127 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~-~v~iwd~~~~~~~~~~~---------~--------------------~~~~~~~~~~~~  127 (221)
                      +.+++|+|+++++++++.++ .+.+||..+++......         +                    +.........+.
T Consensus       117 ~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~  196 (300)
T TIGR03866       117 PEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKIT  196 (300)
T ss_pred             cceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeee
Confidence            56677777777776666553 45566766554433211         1                    111111111111


Q ss_pred             Ee-------eCceEEEEEecCCCEEEE-ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC
Q psy10662        128 GH-------INDKNFVGLATDGDYVAC-GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       128 ~~-------~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  199 (221)
                      .+       ......++|+|+++++++ .+.++.+.+||+++.+....+.                +...+.+++|+|+|
T Consensus       197 ~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~----------------~~~~~~~~~~~~~g  260 (300)
T TIGR03866       197 FEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL----------------VGQRVWQLAFTPDE  260 (300)
T ss_pred             ecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE----------------eCCCcceEEECCCC
Confidence            11       012345789999997544 4556789999998766543321                22357899999999


Q ss_pred             cEEEEec-CCCeEEEEECCccc
Q psy10662        200 RVLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       200 ~~l~~~~-~dg~i~iw~~~~~~  220 (221)
                      ++|++++ .+|.|++||+.+++
T Consensus       261 ~~l~~~~~~~~~i~v~d~~~~~  282 (300)
T TIGR03866       261 KYLLTTNGVSNDVSVIDVAALK  282 (300)
T ss_pred             CEEEEEcCCCCeEEEEECCCCc
Confidence            9998864 58999999999875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG2055|consensus

Probab=99.90  E-value=2.3e-22  Score=143.88  Aligned_cols=196  Identities=17%  Similarity=0.305  Sum_probs=152.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccc-ce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHIN-DK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~-~v   78 (221)
                      |++++|+..+..|.|.+.... +++.+..++ ..+.|..++|+. +..|++++.+|.|.+||++...+++.+....+ .-
T Consensus       313 hd~~fia~~G~~G~I~lLhak-T~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~g  390 (514)
T KOG2055|consen  313 HDSNFIAIAGNNGHIHLLHAK-TKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHG  390 (514)
T ss_pred             CCCCeEEEcccCceEEeehhh-hhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccce
Confidence            578999999999999999987 788888887 688999999985 56688889999999999999988887753322 23


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC--CCeEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE--NNSLYI  156 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~  156 (221)
                      ++++.++++.+||+|+..|.|.|||..+..       .....+++..+..-...|+++.|+|+.++||.++.  +..+++
T Consensus       391 ts~~~S~ng~ylA~GS~~GiVNIYd~~s~~-------~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrL  463 (514)
T KOG2055|consen  391 TSLCISLNGSYLATGSDSGIVNIYDGNSCF-------ASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRL  463 (514)
T ss_pred             eeeeecCCCceEEeccCcceEEEeccchhh-------ccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEE
Confidence            677778999999999999999999965321       12233444455666778999999999999988885  456777


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      --+.+......+.            .....-..|++++|+|.+.+|+.|..+|++.+|.+.
T Consensus       464 VHvPS~TVFsNfP------------~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  464 VHVPSCTVFSNFP------------TSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             EeccceeeeccCC------------CCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            6654433222221            112234468999999999999999999999999874

>KOG1274|consensus

Probab=99.90  E-value=1.4e-21  Score=150.11  Aligned_cols=199  Identities=11%  Similarity=0.111  Sum_probs=159.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      |+|..|++++.||.|++|+.........++.-+...|.+++-. .++|++++.+++|.+|.+.+++.-..+....-++.+
T Consensus        23 ~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~-s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~  101 (933)
T KOG1274|consen   23 PDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY-SNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRD  101 (933)
T ss_pred             CCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec-ccceEEeeccceEEEeeCCCCCccceeeeeeccceE
Confidence            6889999999999999999874423344444477778887754 458999999999999999888776556666778999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      ++|+.+|+++|.|+.|-.|++.++........             +.+|..+|.++.|+|++++||+.+-||.|++||+.
T Consensus       102 ~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~-------------lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~  168 (933)
T KOG1274|consen  102 LAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKV-------------LRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ  168 (933)
T ss_pred             EEEecCCcEEEeecCceeEEEEeccccchhee-------------ecccCCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence            99999999999999999999998876655544             58999999999999999999999999999999999


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++.....+.--.     . .... .....+..++|+|+|..|+..+.|+.|++|+..+..
T Consensus       169 ~~~~~~tl~~v~-----k-~n~~-~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we  221 (933)
T KOG1274|consen  169 DGILSKTLTGVD-----K-DNEF-ILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWE  221 (933)
T ss_pred             cchhhhhcccCC-----c-cccc-cccceeeeeeecCCCCeEEeeccCCeEEEEccCCce
Confidence            887765553100     0 0000 114457889999998888888899999999987643

>KOG2055|consensus

Probab=99.90  E-value=2.3e-21  Score=138.78  Aligned_cols=190  Identities=11%  Similarity=0.172  Sum_probs=154.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecC-CceeeEEEEeccCceEEEEEecCC--cEEEecCCCcEEEEEcCCCcccee--eeccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN-TKEALAVFKGHRKAVSYVKFLNKE--DIVSASTDSQLKLWNINKPNCLRS--FVGHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~~~~~--~~~~~   75 (221)
                      |...+|++|+.||+++||.++. ....++.+.-.+.+|.+.+|.|++  .+++++....++.||+.+.+..+.  ..++.
T Consensus       223 p~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e  302 (514)
T KOG2055|consen  223 PTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVE  302 (514)
T ss_pred             CCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcc
Confidence            4567899999999999999972 234566777778899999999854  488999999999999988765432  23333


Q ss_pred             -cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         76 -NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        76 -~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                       ..+.....+|++++|+..+..|.|.+....+++.+..+              ...+.|..++|+.+++.|++++.+|.|
T Consensus       303 ~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~--------------KieG~v~~~~fsSdsk~l~~~~~~GeV  368 (514)
T KOG2055|consen  303 EKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSF--------------KIEGVVSDFTFSSDSKELLASGGTGEV  368 (514)
T ss_pred             cchhheeEecCCCCeEEEcccCceEEeehhhhhhhhhee--------------eeccEEeeEEEecCCcEEEEEcCCceE
Confidence             35778889999999999999999999999888887765              345778999999999999999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+||+++..++..+.-+.              .-.=+++|.+++|+|||+|+..|.|.|||..+
T Consensus       369 ~v~nl~~~~~~~rf~D~G--------------~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s  418 (514)
T KOG2055|consen  369 YVWNLRQNSCLHRFVDDG--------------SVHGTSLCISLNGSYLATGSDSGIVNIYDGNS  418 (514)
T ss_pred             EEEecCCcceEEEEeecC--------------ccceeeeeecCCCceEEeccCcceEEEeccch
Confidence            999999998777664111              11235688889999999999999999999754

>KOG1408|consensus

Probab=99.90  E-value=3.7e-22  Score=150.24  Aligned_cols=205  Identities=10%  Similarity=0.089  Sum_probs=154.6

Q ss_pred             eEEEEeCCCeEEEEEecCC--cee----------eE------------------------EEEeccCceEEEEEec-CCc
Q psy10662          5 HLAFGSADHCVHYYDLRNT--KEA----------LA------------------------VFKGHRKAVSYVKFLN-KED   47 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~--~~~----------~~------------------------~~~~~~~~i~~~~~~~-~~~   47 (221)
                      .++|++.|++|++|+++..  ++.          ++                        ..-..+..+.+++.+| +++
T Consensus       394 cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqh  473 (1080)
T KOG1408|consen  394 CFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQH  473 (1080)
T ss_pred             ceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcce
Confidence            4789999999999999730  111          00                        0011234689999998 456


Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeC---CCCEEEEecCCCeEEEEECCCCe-----------eeEEE
Q psy10662         48 IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLAT---DGDYVACGSENNSLYIYYKGLSK-----------HMHAY  113 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~~-----------~~~~~  113 (221)
                      |++|..-|.+++|++.+.+....+..|+..|.|+.|+.   ..++||+++.|..|+|||+...-           .+..+
T Consensus       474 LAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsv  553 (1080)
T KOG1408|consen  474 LASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSV  553 (1080)
T ss_pred             ecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEE
Confidence            99999999999999999999988999999999999974   24689999999999999975331           12222


Q ss_pred             Eeeccc--ceeE-------------------eeEE-----EeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceee
Q psy10662        114 RFDTVR--SMLE-------------------SSFV-----GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA  167 (221)
Q Consensus       114 ~~~~~~--~~~~-------------------~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~  167 (221)
                      +|....  .+.+                   ..+.     -....++.++..|..+++++++.|+.|+|||+.+++....
T Consensus       554 KFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~  633 (1080)
T KOG1408|consen  554 KFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKS  633 (1080)
T ss_pred             EEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeee
Confidence            221110  0000                   0111     1234577899999999999999999999999999998887


Q ss_pred             eeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        168 YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      |+            .-.+|++....+...|.|.||++.+.|.++.++|+.+|++
T Consensus       634 FK------------gs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEc  675 (1080)
T KOG1408|consen  634 FK------------GSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGEC  675 (1080)
T ss_pred             ec------------ccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchh
Confidence            75            2236777778899999999999999999999999988763

>KOG1063|consensus

Probab=99.89  E-value=2.6e-21  Score=144.65  Aligned_cols=88  Identities=14%  Similarity=0.223  Sum_probs=71.6

Q ss_pred             eeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662        121 MLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR  200 (221)
Q Consensus       121 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  200 (221)
                      .....+.+|.-.|+.++|+||+++|++.+.|+++.+|...... ...++          ....+.|..-|.++.|+|++.
T Consensus       563 ~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~-~~e~~----------fa~~k~HtRIIWdcsW~pde~  631 (764)
T KOG1063|consen  563 LQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDI-KDEFR----------FACLKAHTRIIWDCSWSPDEK  631 (764)
T ss_pred             hhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeeccc-chhhh----------hccccccceEEEEcccCcccc
Confidence            3345678899999999999999999999999999999874322 11111          122457999999999999999


Q ss_pred             EEEEecCCCeEEEEECCcc
Q psy10662        201 VLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       201 ~l~~~~~dg~i~iw~~~~~  219 (221)
                      +++|+|.|.++++|..+..
T Consensus       632 ~FaTaSRDK~VkVW~~~~~  650 (764)
T KOG1063|consen  632 YFATASRDKKVKVWEEPDL  650 (764)
T ss_pred             eeEEecCCceEEEEeccCc
Confidence            9999999999999998764

>KOG0307|consensus

Probab=99.89  E-value=2.4e-23  Score=162.89  Aligned_cols=192  Identities=15%  Similarity=0.156  Sum_probs=148.0

Q ss_pred             eEEEEeCCCeEEEEEecCC-----ceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeee--ccc
Q psy10662          5 HLAFGSADHCVHYYDLRNT-----KEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFV--GHI   75 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~-----~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~--~~~   75 (221)
                      +||.|..||.|.+||...-     ...+.+...|.+.|..+.|++  ++.|++|+.||.|.|||+.+.+.-....  ...
T Consensus        82 lIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~  161 (1049)
T KOG0307|consen   82 LIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPP  161 (1049)
T ss_pred             eeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCc
Confidence            6899999999999998731     234567788999999999996  4579999999999999998865554442  235


Q ss_pred             cceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EEEEecCC--
Q psy10662         76 NDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YVACGSEN--  151 (221)
Q Consensus        76 ~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d--  151 (221)
                      +.|.+++|+..-. .|++++.+|.+.|||++..+++-.+.           .......+..++|+|+.. .++++++|  
T Consensus       162 ~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls-----------~~~~~~~~S~l~WhP~~aTql~~As~dd~  230 (1049)
T KOG0307|consen  162 SEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLS-----------DTPGRMHCSVLAWHPDHATQLLVASGDDS  230 (1049)
T ss_pred             ccceEeccchhhhHHhhccCCCCCceeccccCCCcccccc-----------cCCCccceeeeeeCCCCceeeeeecCCCC
Confidence            6799999986544 57899999999999999887765541           112224577899999764 45555544  


Q ss_pred             -CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC-cEEEEecCCCeEEEEECCcccC
Q psy10662        152 -NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       152 -~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                       -.|.+||++....              +...+.+|...|.++.|++.+ ++|++++.|++|.+|+.+++++
T Consensus       231 ~PviqlWDlR~ass--------------P~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv  288 (1049)
T KOG0307|consen  231 APVIQLWDLRFASS--------------PLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV  288 (1049)
T ss_pred             CceeEeecccccCC--------------chhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceE
Confidence             3699999864432              333445899999999999965 8999999999999999999764

>KOG2048|consensus

Probab=99.89  E-value=5.7e-21  Score=142.45  Aligned_cols=195  Identities=12%  Similarity=0.080  Sum_probs=157.0

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccce--eeeccccce
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLR--SFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~--~~~~~~~~v   78 (221)
                      ++.+|.+.+.+|.|.-||+. +.++...+....+.|++++.+| +..++.|+.||.+..++...++...  .+...+++|
T Consensus        79 e~~RLFS~g~sg~i~EwDl~-~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRv  157 (691)
T KOG2048|consen   79 EGGRLFSSGLSGSITEWDLH-TLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRV  157 (691)
T ss_pred             cCCeEEeecCCceEEEEecc-cCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceE
Confidence            46778888999999999998 7888888888889999999998 4558888999988888876665443  334456899


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE-EeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV-GHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      .+++|+|++..+++|+.||.|++||..+++.+.......      ..+. +...-|.++.|-.++ .|++|...|.|.+|
T Consensus       158 Lslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~------d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FW  230 (691)
T KOG2048|consen  158 LSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQL------DRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFW  230 (691)
T ss_pred             EEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecc------cccccCCceEEEEEEEeecC-cEEEecCCceEEEE
Confidence            999999999999999999999999999988876332111      0111 133456777777554 78999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      |...+..++.+.               .|...|.+++..+++.++++++.|+.|.-+...++
T Consensus       231 d~~~gTLiqS~~---------------~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~  277 (691)
T KOG2048|consen  231 DSIFGTLIQSHS---------------CHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTN  277 (691)
T ss_pred             cccCcchhhhhh---------------hhhcceeEEEEcCCCCeEEEccCCCceEEEEecCC
Confidence            988887765553               68888999999999999999999999988887664

>KOG0322|consensus

Probab=99.89  E-value=1.3e-21  Score=131.06  Aligned_cols=197  Identities=15%  Similarity=0.195  Sum_probs=143.3

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEE-eccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccce-------------
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFK-GHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLR-------------   69 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~-------------   69 (221)
                      .+|.+|...|.|++|++. +......++ .|...|+.+.--|++.+.+-+.|+.+.+|++..+..+.             
T Consensus        26 ~rL~sg~~~G~V~~w~lq-t~r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCr  104 (323)
T KOG0322|consen   26 ERLMSGLSVGIVKMWVLQ-TERDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCR  104 (323)
T ss_pred             hhhhcccccceEEEEEee-cCccchhhhhhccceeeceeecCCcchhhcCCCceEEEEEccCcceEEEeeeecccccccc
Confidence            468899999999999998 566666666 57788999988899999999999999999986421110             


Q ss_pred             -ee-------------e--------------------------ccccceeEEEEeC-CCC--EEEEecCCCeEEEEECCC
Q psy10662         70 -SF-------------V--------------------------GHINDKNFVGLAT-DGD--YVACGSENNSLYIYYKGL  106 (221)
Q Consensus        70 -~~-------------~--------------------------~~~~~v~~~~~~~-~~~--~l~~~~~d~~v~iwd~~~  106 (221)
                       .+             .                          ...+.+.|..+.. ++.  ++++|-++|.|.+||+.+
T Consensus       105 fSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~  184 (323)
T KOG0322|consen  105 FSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLST  184 (323)
T ss_pred             ceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccC
Confidence             00             0                          1112344444322 233  467888999999999998


Q ss_pred             CeeeEEEE--------------------e-----------------------ecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662        107 SKHMHAYR--------------------F-----------------------DTVRSMLESSFVGHINDKNFVGLATDGD  143 (221)
Q Consensus       107 ~~~~~~~~--------------------~-----------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~  143 (221)
                      +..+-.+.                    +                       +....+......-.+..+..+..-||++
T Consensus       185 ~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~K  264 (323)
T KOG0322|consen  185 GDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGK  264 (323)
T ss_pred             CceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCc
Confidence            74433332                    1                       1011111122223344567788899999


Q ss_pred             EEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        144 YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       144 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      .+|+++.|+.|++|..++..++..++               -|...|++++|+|+..++|+++.|++|.+|++
T Consensus       265 IlATAGWD~RiRVyswrtl~pLAVLk---------------yHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  265 ILATAGWDHRIRVYSWRTLNPLAVLK---------------YHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             EEeecccCCcEEEEEeccCCchhhhh---------------hhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            99999999999999988887766654               57889999999999999999999999999986

>KOG2096|consensus

Probab=99.89  E-value=1.4e-21  Score=134.28  Aligned_cols=193  Identities=12%  Similarity=0.141  Sum_probs=142.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcC---C-----Cccceeee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNIN---K-----PNCLRSFV   72 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~---~-----~~~~~~~~   72 (221)
                      ++.+|++++.|..|.+|++.  ++.+..+......-+..+.+|+++ +++++.-.-|++|.+-   .     -..+.+++
T Consensus       198 ~~k~imsas~dt~i~lw~lk--Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~Lk  275 (420)
T KOG2096|consen  198 NAKYIMSASLDTKICLWDLK--GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLK  275 (420)
T ss_pred             CceEEEEecCCCcEEEEecC--CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheec
Confidence            46789999999999999997  777888776666677788898655 6778888899999873   2     23456789


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeeccccee-EeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML-ESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      +|...|..++|+++...+++.+.||.+++||+.-.-...+   |+..-+. ...+....+....++++|+|+.|+.+. .
T Consensus       276 GH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~q---Dpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-g  351 (420)
T KOG2096|consen  276 GHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQ---DPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-G  351 (420)
T ss_pred             cchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCC---CchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-C
Confidence            9999999999999999999999999999999753211100   1000000 011222334445899999999888654 5


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      ..+.+|..++++....++              ..|...|.+++|+++|+++++++ |..+++..
T Consensus       352 s~l~~~~se~g~~~~~~e--------------~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  352 SDLKVFASEDGKDYPELE--------------DIHSTTISSISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             CceEEEEcccCccchhHH--------------HhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence            579999988776543332              35888999999999999999986 66777765

>KOG0646|consensus

Probab=99.89  E-value=1.4e-21  Score=139.86  Aligned_cols=193  Identities=14%  Similarity=0.165  Sum_probs=152.0

Q ss_pred             ceEEEEe-CCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEec-CCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          4 CHLAFGS-ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAS-TDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         4 ~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~-~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      .+++++. ....|.+|.+.+ .......---.++|.+++-+|.+.++.++ ..|.+++|.+.+|+.+..+..|-..|+|+
T Consensus        51 ~yllsaq~~rp~l~vw~i~k-~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL  129 (476)
T KOG0646|consen   51 EYLLSAQLKRPLLHVWEILK-KDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCL  129 (476)
T ss_pred             hheeeecccCccccccccCc-hhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEE
Confidence            3455543 345788999873 33233222356789999999877655554 99999999999999999999999999999


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC--CCEEEEecCCCeEEEEEc
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD--GDYVACGSENNSLYIYYK  159 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~  159 (221)
                      .|+-|+.+|++|+.||.|.+|++..--..    .+.....+...+..|.-+|+.+...+.  ...+++++.|.++++||+
T Consensus       130 ~fs~dgs~iiTgskDg~V~vW~l~~lv~a----~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdl  205 (476)
T KOG0646|consen  130 KFSDDGSHIITGSKDGAVLVWLLTDLVSA----DNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDL  205 (476)
T ss_pred             EEeCCCcEEEecCCCccEEEEEEEeeccc----ccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEe
Confidence            99999999999999999999986321100    011234556678899999999887654  458999999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ..+..+..+.|                ...+.+++.+|-++.++.|+.+|.|.+.++.
T Consensus       206 S~g~LLlti~f----------------p~si~av~lDpae~~~yiGt~~G~I~~~~~~  247 (476)
T KOG0646|consen  206 SLGVLLLTITF----------------PSSIKAVALDPAERVVYIGTEEGKIFQNLLF  247 (476)
T ss_pred             ccceeeEEEec----------------CCcceeEEEcccccEEEecCCcceEEeeehh
Confidence            99988877753                4478999999999999999999999887764

>KOG0321|consensus

Probab=99.89  E-value=2.5e-21  Score=143.64  Aligned_cols=210  Identities=16%  Similarity=0.180  Sum_probs=142.1

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEE--EEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCc------------
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAV--FKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPN------------   66 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~--~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~------------   66 (221)
                      ..+|++++.|.++++||++ +..+...  +.+|...|.+++|.|.  ..|++|+.||.|.|||++-..            
T Consensus       112 e~~lVsasGDsT~r~Wdvk-~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~  190 (720)
T KOG0321|consen  112 ESLLVSASGDSTIRPWDVK-TSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIY  190 (720)
T ss_pred             ceeEEEccCCceeeeeeec-cceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhh
Confidence            4678999999999999998 5665554  7899999999999973  458899999999999986321            


Q ss_pred             --------c-------ceeeeccccceeE---EEEeCCCCEEEEecC-CCeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         67 --------C-------LRSFVGHINDKNF---VGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        67 --------~-------~~~~~~~~~~v~~---~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                              +       +..-+.+...|.+   +.+..|...||+++. |+.|+|||+++........  +   .....+.
T Consensus       191 ~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~e--p---~~~~~~~  265 (720)
T KOG0321|consen  191 GRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQE--P---RGSDKYP  265 (720)
T ss_pred             ccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccC--C---CcccCcc
Confidence                    0       0011123333333   444457778888887 9999999999876654321  1   1111112


Q ss_pred             Ee---eCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCcee----------eeeeec----------------------
Q psy10662        128 GH---INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH----------AYRFDT----------------------  172 (221)
Q Consensus       128 ~~---~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~----------~~~~~~----------------------  172 (221)
                      .|   ...+.++..+..|.+|.+.+.|+.|++|++.....-.          .+....                      
T Consensus       266 t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~  345 (720)
T KOG0321|consen  266 THSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWV  345 (720)
T ss_pred             CcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeee
Confidence            22   3346677777788998888889999999987543211          110000                      


Q ss_pred             ccccccccccccccccceeEEEEcCCC-cEEEEecCCCeEEEEECCc
Q psy10662        173 VRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       173 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~  218 (221)
                      ..........+.+|...|++++|.|.. .-+++++.|..+++|++..
T Consensus       346 vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~  392 (720)
T KOG0321|consen  346 VSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSN  392 (720)
T ss_pred             ecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccC
Confidence            011122333456899999999998843 3467779999999999864

>KOG0649|consensus

Probab=99.89  E-value=2.5e-20  Score=123.84  Aligned_cols=196  Identities=14%  Similarity=0.173  Sum_probs=145.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecC---------CceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcc----
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN---------TKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNC----   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~----   67 (221)
                      |.+++|++|..+|.|.++.+..         .+..+...++|.++|+.++|. +..|++|+ ||.|+-|..+....    
T Consensus        20 p~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~-d~~Lls~g-dG~V~gw~W~E~~es~~~   97 (325)
T KOG0649|consen   20 PSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH-DDFLLSGG-DGLVYGWEWNEEEESLAT   97 (325)
T ss_pred             CcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee-hhheeecc-CceEEEeeehhhhhhccc
Confidence            5678999999999999998862         234455668999999999998 45677766 49999998764322    


Q ss_pred             --cee--eecc-----ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEE
Q psy10662         68 --LRS--FVGH-----INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL  138 (221)
Q Consensus        68 --~~~--~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  138 (221)
                        .-.  ..-|     -..|+++...|..+.++.++.|+.++-||+++++..+++             .+|...+.++.-
T Consensus        98 K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~-------------rGHtDYvH~vv~  164 (325)
T KOG0649|consen   98 KRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREY-------------RGHTDYVHSVVG  164 (325)
T ss_pred             hhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEE-------------cCCcceeeeeee
Confidence              111  1112     235899999998888888889999999999999887664             899999999988


Q ss_pred             ecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        139 ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       139 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      -.....+++|++||++++||+++.+....+........+.     ..-..+|.+++-  +..+|++|+. ..+.+|.+++
T Consensus       165 R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lR-----p~~g~wigala~--~edWlvCGgG-p~lslwhLrs  236 (325)
T KOG0649|consen  165 RNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLR-----PDWGKWIGALAV--NEDWLVCGGG-PKLSLWHLRS  236 (325)
T ss_pred             cccCcceeecCCCccEEEEeccccceeEEeccccChhhcC-----cccCceeEEEec--cCceEEecCC-CceeEEeccC
Confidence            5555578999999999999999999988775332222211     122345666665  5668888764 5689999886


Q ss_pred             c
Q psy10662        219 R  219 (221)
Q Consensus       219 ~  219 (221)
                      .
T Consensus       237 s  237 (325)
T KOG0649|consen  237 S  237 (325)
T ss_pred             C
Confidence            4

>KOG0307|consensus

Probab=99.88  E-value=1.4e-22  Score=158.70  Aligned_cols=191  Identities=13%  Similarity=0.203  Sum_probs=150.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEE-EEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeecccc--
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAV-FKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHIN--   76 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~--   76 (221)
                      .+++||+|+.||.|.|||+.+...+..- -....+.|.+++|+.  ...|++++.+|.+.|||++..+.+..+..+.+  
T Consensus       128 q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~  207 (1049)
T KOG0307|consen  128 QGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRM  207 (1049)
T ss_pred             CCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCcc
Confidence            4679999999999999999853333222 122456899999995  56699999999999999999988877765544  


Q ss_pred             ceeEEEEeCCCC-EEEEecCCC---eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC-CEEEEecCC
Q psy10662         77 DKNFVGLATDGD-YVACGSENN---SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG-DYVACGSEN  151 (221)
Q Consensus        77 ~v~~~~~~~~~~-~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d  151 (221)
                      .+..++|+|+.. .+++++.|.   .|.+||++-...            ..+.+.+|...|.++.|++.+ .++++++.|
T Consensus       208 ~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ass------------P~k~~~~H~~GilslsWc~~D~~lllSsgkD  275 (1049)
T KOG0307|consen  208 HCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASS------------PLKILEGHQRGILSLSWCPQDPRLLLSSGKD  275 (1049)
T ss_pred             ceeeeeeCCCCceeeeeecCCCCCceeEeecccccCC------------chhhhcccccceeeeccCCCCchhhhcccCC
Confidence            478899999875 455555543   699999874322            223457999999999999855 899999999


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECCcc
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~  219 (221)
                      +.|.+|+.++++.+..+.               ....++..+.|+|... .++.++-||.|.|+.+.+.
T Consensus       276 ~~ii~wN~~tgEvl~~~p---------------~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~  329 (1049)
T KOG0307|consen  276 NRIICWNPNTGEVLGELP---------------AQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGT  329 (1049)
T ss_pred             CCeeEecCCCceEeeecC---------------CCCcceeeeeecCCCcchhhhheeccceeeeeeecC
Confidence            999999999988877664               3456899999999665 7888889999999999764

>KOG0771|consensus

Probab=99.88  E-value=1.5e-21  Score=138.18  Aligned_cols=193  Identities=15%  Similarity=0.186  Sum_probs=145.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeec--cccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVG--HIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~--~~~~   77 (221)
                      +||..|++|+.||.+|||+.. ....+.....|.+.|.++.|+|++ .|++.+.| ..+||+++++..+.....  .+..
T Consensus       154 ~~gs~latgg~dg~lRv~~~P-s~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~  231 (398)
T KOG0771|consen  154 GDGSKLATGGTDGTLRVWEWP-SMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEM  231 (398)
T ss_pred             CCCCEeeeccccceEEEEecC-cchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchh
Confidence            478999999999999999977 566666677799999999999876 68888888 999999999977665532  2234


Q ss_pred             eeEEEEeCCC---CE--EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         78 KNFVGLATDG---DY--VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        78 v~~~~~~~~~---~~--l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      ...+.|+.++   .+  ++....-+.|+.||+...+.-..+        ...+.......|++++.+++|++++.|+.||
T Consensus       232 ~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l--------~~~~~~~~~~siSsl~VS~dGkf~AlGT~dG  303 (398)
T KOG0771|consen  232 FSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFL--------RLRKKIKRFKSISSLAVSDDGKFLALGTMDG  303 (398)
T ss_pred             hhhceecccCCCceEEEEEecCCCCceeEEEeeeecccccc--------chhhhhhccCcceeEEEcCCCcEEEEeccCC
Confidence            6677887766   22  333444567888776533221000        0111223345799999999999999999999


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      .|.+++..+-+..+..+              +.|...|+.+.|+|+.+++++.+.|..+.+..+.
T Consensus       304 sVai~~~~~lq~~~~vk--------------~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~  354 (398)
T KOG0771|consen  304 SVAIYDAKSLQRLQYVK--------------EAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA  354 (398)
T ss_pred             cEEEEEeceeeeeEeeh--------------hhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence            99999987666554443              3688899999999999999999999988887765

>KOG2445|consensus

Probab=99.87  E-value=4.2e-20  Score=126.34  Aligned_cols=183  Identities=19%  Similarity=0.270  Sum_probs=135.2

Q ss_pred             EeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC----ccceeeeccccceeEEEEeC--CCCEEEEecCCCeEEEEE
Q psy10662         31 KGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP----NCLRSFVGHINDKNFVGLAT--DGDYVACGSENNSLYIYY  103 (221)
Q Consensus        31 ~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~iwd  103 (221)
                      .+|.+-|.++.|.+ +.++++|+.|++|+|||.+..    .+....+.|.+.|..+.|.+  -|+.+|+++.|+++.||.
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            46888999999996 778999999999999997543    34445678999999999954  477899999999999997


Q ss_pred             CCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec--CCCEEEEecCCCeEEEEEcCCCCcee---------------
Q psy10662        104 KGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT--DGDYVACGSENNSLYIYYKGLSKHMH---------------  166 (221)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~---------------  166 (221)
                      -...+    ..-.........++......|+.+.|.|  -|-.+|+++.||.++||+.-....+.               
T Consensus        90 E~~~~----~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp  165 (361)
T KOG2445|consen   90 EQEKS----EEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPP  165 (361)
T ss_pred             ecccc----cccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCc
Confidence            53111    0001123344556677788999999998  56789999999999999753221111               


Q ss_pred             -------------------------------------eeeeecccccccccccccccccceeEEEEcCC----CcEEEEe
Q psy10662        167 -------------------------------------AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL----SRVLVAA  205 (221)
Q Consensus       167 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~  205 (221)
                                                           .+++....+.+.....+.+|..+|++++|.|+    -.+||++
T Consensus       166 ~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA  245 (361)
T KOG2445|consen  166 GKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVA  245 (361)
T ss_pred             ccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEe
Confidence                                                 11111222344455666789999999999996    3579999


Q ss_pred             cCCCeEEEEECCc
Q psy10662        206 NSQGIIKIYVIPI  218 (221)
Q Consensus       206 ~~dg~i~iw~~~~  218 (221)
                      +.|| |+||.+..
T Consensus       246 ~kDg-v~I~~v~~  257 (361)
T KOG2445|consen  246 TKDG-VRIFKVKV  257 (361)
T ss_pred             ecCc-EEEEEEee
Confidence            9999 99999974

>KOG1445|consensus

Probab=99.87  E-value=2.7e-21  Score=144.01  Aligned_cols=105  Identities=16%  Similarity=0.235  Sum_probs=84.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc-ee----eEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK-EA----LAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~-~~----~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      +..+||+|+.|..|+||.+.... +.    -..+.+..-.+.++.|+| ..-|+..+..|++++||+.+++.+.++.+|.
T Consensus        91 ~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g~v~i~D~stqk~~~el~~h~  170 (1012)
T KOG1445|consen   91 ADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHGSVYITDISTQKTAVELSGHT  170 (1012)
T ss_pred             chhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCceEEEEEcccCceeecccCCc
Confidence            45689999999999999997221 11    122333334688999997 2334455668999999999999999999999


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCC
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGL  106 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~  106 (221)
                      ..|.+..|+.||.++++++.|..|+|||.+.
T Consensus       171 d~vQSa~WseDG~llatscKdkqirifDPRa  201 (1012)
T KOG1445|consen  171 DKVQSADWSEDGKLLATSCKDKQIRIFDPRA  201 (1012)
T ss_pred             hhhhccccccCCceEeeecCCcceEEeCCcc
Confidence            9999999999999999999999999999754

>KOG2110|consensus

Probab=99.87  E-value=4.4e-19  Score=124.07  Aligned_cols=185  Identities=11%  Similarity=0.168  Sum_probs=139.4

Q ss_pred             eEEEEeCC--CeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec---ccccee
Q psy10662          5 HLAFGSAD--HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG---HINDKN   79 (221)
Q Consensus         5 ~l~~~~~d--g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~---~~~~v~   79 (221)
                      ++|..+.+  ..+++++.. .+..+..+. ...+|.++.++.++ |+.+-. ..|+|||+++.+++.++..   +...+.
T Consensus        58 LvaiV~~~qpr~Lkv~~~K-k~~~ICe~~-fpt~IL~VrmNr~R-LvV~Le-e~IyIydI~~MklLhTI~t~~~n~~gl~  133 (391)
T KOG2110|consen   58 LVAIVSIKQPRKLKVVHFK-KKTTICEIF-FPTSILAVRMNRKR-LVVCLE-ESIYIYDIKDMKLLHTIETTPPNPKGLC  133 (391)
T ss_pred             eeEEEecCCCceEEEEEcc-cCceEEEEe-cCCceEEEEEccce-EEEEEc-ccEEEEecccceeehhhhccCCCccceE
Confidence            44444433  347777776 444444444 45678888877544 444443 3499999999998887743   444566


Q ss_pred             EEEEeCCCCEEEEec--CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe-EEE
Q psy10662         80 FVGLATDGDYVACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS-LYI  156 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~  156 (221)
                      ++.+++.+.+++.-+  ..|.|.+||..+-+++..+             ..|.+.+-+++|+|+|.+||++++.|+ |||
T Consensus       134 AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I-------------~aH~~~lAalafs~~G~llATASeKGTVIRV  200 (391)
T KOG2110|consen  134 ALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTI-------------NAHKGPLAALAFSPDGTLLATASEKGTVIRV  200 (391)
T ss_pred             eeccCCCCceEEecCCCCCceEEEEEcccceeeeEE-------------EecCCceeEEEECCCCCEEEEeccCceEEEE
Confidence            666666666887543  4689999999887777654             799999999999999999999999997 799


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      |.+.+++.+++++-.             .....|.+++|+|++++|++.|..++|+++.++..
T Consensus       201 f~v~~G~kl~eFRRG-------------~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~  250 (391)
T KOG2110|consen  201 FSVPEGQKLYEFRRG-------------TYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV  250 (391)
T ss_pred             EEcCCccEeeeeeCC-------------ceeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence            999999988877511             12346899999999999999999999999998753

>KOG1445|consensus

Probab=99.87  E-value=3.2e-21  Score=143.63  Aligned_cols=189  Identities=15%  Similarity=0.230  Sum_probs=142.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCC------ceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeec
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNT------KEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~------~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      |..+||+++.||.|++|.+...      ..+...+..|...|+++.|+|  .+.|++++.|-+|++||+++++....+.+
T Consensus       639 D~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~g  718 (1012)
T KOG1445|consen  639 DDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVG  718 (1012)
T ss_pred             ChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheecc
Confidence            6678999999999999999743      345678899999999999998  67799999999999999999999999999


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee-eEEEEeecccceeEeeEEEe-eCceEEEEEecCCCEEEEecCC
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLESSFVGH-INDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      |.+.|..++|+|+|+.+|+.+.||+|++|..++++. +++-             .+. ...--.+.|.-+|+++++.+.|
T Consensus       719 HtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg-------------~gpvgtRgARi~wacdgr~viv~Gfd  785 (1012)
T KOG1445|consen  719 HTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEG-------------KGPVGTRGARILWACDGRIVIVVGFD  785 (1012)
T ss_pred             CcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccC-------------CCCccCcceeEEEEecCcEEEEeccc
Confidence            999999999999999999999999999999876543 2111             111 1223357788899999888765


Q ss_pred             ----CeEEEEEcCCCC--ceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECC
Q psy10662        152 ----NSLYIYYKGLSK--HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIP  217 (221)
Q Consensus       152 ----~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~  217 (221)
                          +.|.+||.++-.  .+....++..              ..+.--.+.+|.+ ++++|-.|..|.+|++-
T Consensus       786 k~SeRQv~~Y~Aq~l~~~pl~t~~lDva--------------ps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~  844 (1012)
T KOG1445|consen  786 KSSERQVQMYDAQTLDLRPLYTQVLDVA--------------PSPLVPHYDYDSNVLFLTGKGDRFVNMYEVI  844 (1012)
T ss_pred             ccchhhhhhhhhhhccCCcceeeeeccc--------------CccccccccCCCceEEEecCCCceEEEEEec
Confidence                568888876543  2222221111              0111223455554 55677789999999874

>KOG2106|consensus

Probab=99.87  E-value=2.5e-19  Score=130.03  Aligned_cols=211  Identities=13%  Similarity=0.209  Sum_probs=149.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCcee---eEEEEec-cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEA---LAVFKGH-RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~---~~~~~~~-~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |.++++++ ..|.+..|+++ .+..   ...++.+ +..|.|++|.+++.+++|..+|.|.||+..+.+..+....|++.
T Consensus       212 d~nliit~-Gk~H~~Fw~~~-~~~l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~gg  289 (626)
T KOG2106|consen  212 DPNLIITC-GKGHLYFWTLR-GGSLVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGG  289 (626)
T ss_pred             CCcEEEEe-CCceEEEEEcc-CCceEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCc
Confidence            44566666 56789999998 4433   2334433 35699999999999999999999999999888877777799999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEee----------------------------cccceeEeeEEEe
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD----------------------------TVRSMLESSFVGH  129 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~  129 (221)
                      |.+++...+|.++ +|+.|..|..||- .-+.++..+..                            ...........+|
T Consensus       290 v~~L~~lr~Gtll-SGgKDRki~~Wd~-~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh  367 (626)
T KOG2106|consen  290 VFSLCMLRDGTLL-SGGKDRKIILWDD-NYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGH  367 (626)
T ss_pred             eEEEEEecCccEe-ecCccceEEeccc-cccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEec
Confidence            9999999988755 4999999999982 22222221100                            0011111234578


Q ss_pred             eCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceee---------eeeeccccc--------c-------cccccccc
Q psy10662        130 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA---------YRFDTVRSM--------L-------ERDRNEDD  185 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~---------~~~~~~~~~--------~-------~~~~~~~~  185 (221)
                      ......++.+|+...+++++.|+.+++|+  ..+.+..         ..|++.+-.        +       ........
T Consensus       368 ~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~  445 (626)
T KOG2106|consen  368 GDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHT  445 (626)
T ss_pred             ccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEe
Confidence            88889999999999999999999999998  2222221         222222100        0       01111122


Q ss_pred             cccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        186 TNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       186 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+.+++.+.|+|+|.+||.|+.|+.|++|.+..
T Consensus       446 d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~  478 (626)
T KOG2106|consen  446 DNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSA  478 (626)
T ss_pred             cCCceEEEEEcCCCCEEEEecCCCeEEEEEECC
Confidence            377899999999999999999999999999864

>KOG2919|consensus

Probab=99.86  E-value=4.7e-20  Score=127.04  Aligned_cols=192  Identities=14%  Similarity=0.208  Sum_probs=144.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEe--ccC---ceEEEEEecCCcEEEecCCCcEEEEEc-CCCccc--eee-
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG--HRK---AVSYVKFLNKEDIVSASTDSQLKLWNI-NKPNCL--RSF-   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~--~~~---~i~~~~~~~~~~l~s~~~d~~v~~wd~-~~~~~~--~~~-   71 (221)
                      |+.+++|+.+.+.-|++||.- +++....+++  |.+   ...+++|+|++.-+.++..+.|++||+ +.+..-  ... 
T Consensus       121 P~t~l~a~ssr~~PIh~wdaf-tG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~  199 (406)
T KOG2919|consen  121 PSTNLFAVSSRDQPIHLWDAF-TGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTV  199 (406)
T ss_pred             CccceeeeccccCceeeeecc-ccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhh
Confidence            677899999999999999998 7776666653  333   457899999888777788999999999 444321  111 


Q ss_pred             ----eccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE
Q psy10662         72 ----VGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA  146 (221)
Q Consensus        72 ----~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  146 (221)
                          .+..+.+.+++|+|-.. .++.++....+-||.-....++..             +.+|.+.|+.+.|.++|+.|.
T Consensus       200 ~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~l-------------lggh~gGvThL~~~edGn~lf  266 (406)
T KOG2919|consen  200 TKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQL-------------LGGHGGGVTHLQWCEDGNKLF  266 (406)
T ss_pred             hcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceee-------------ecccCCCeeeEEeccCcCeec
Confidence                13366789999999655 789999998898987666666554             479999999999999999999


Q ss_pred             EecC-CCeEEEEEcCCCCceeeeeeecccccccccccccc-cccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        147 CGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD-TNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       147 ~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +|.. +-.|..||++.....           +..+....+ .+..| -....|++++|++|+.||.|++||++.
T Consensus       267 sGaRk~dkIl~WDiR~~~~p-----------v~~L~rhv~~TNQRI-~FDld~~~~~LasG~tdG~V~vwdlk~  328 (406)
T KOG2919|consen  267 SGARKDDKILCWDIRYSRDP-----------VYALERHVGDTNQRI-LFDLDPKGEILASGDTDGSVRVWDLKD  328 (406)
T ss_pred             ccccCCCeEEEEeehhccch-----------hhhhhhhccCccceE-EEecCCCCceeeccCCCccEEEEecCC
Confidence            9885 678999999764321           111111112 22333 356678999999999999999999986

>KOG0303|consensus

Probab=99.86  E-value=1.4e-20  Score=132.60  Aligned_cols=177  Identities=12%  Similarity=0.162  Sum_probs=138.1

Q ss_pred             CeEEEEEecCCcee---eEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCC-------ccceeeeccccceeE
Q psy10662         13 HCVHYYDLRNTKEA---LAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKP-------NCLRSFVGHINDKNF   80 (221)
Q Consensus        13 g~i~i~~~~~~~~~---~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~-------~~~~~~~~~~~~v~~   80 (221)
                      |...+.-+.+.++.   .-.+.+|.++|..+.|+|  +..+++||.|.+|.||.+-.+       +++..+.+|...|--
T Consensus        57 gaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~  136 (472)
T KOG0303|consen   57 GAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGL  136 (472)
T ss_pred             cceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEE
Confidence            34444444433332   224578999999999997  667999999999999998653       556778899999999


Q ss_pred             EEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         81 VGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        81 ~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      ++|+|... .|++++.|++|.+|++.+++.+-++              .|...|.++.|+.+|.+|++.+.|+.|++||.
T Consensus       137 V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l--------------~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dp  202 (472)
T KOG0303|consen  137 VQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITL--------------DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDP  202 (472)
T ss_pred             EeecccchhhHhhccCCceEEEEeccCCceeeec--------------CCCCeEEEEEeccCCceeeeecccceeEEEcC
Confidence            99999764 6899999999999999999887654              38999999999999999999999999999999


Q ss_pred             CCCCceeeeeeeccccccccccccccccc-ceeEEEEcCCCcEEEEec---CCCeEEEEECCc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNE-FVSAVCWRQLSRVLVAAN---SQGIIKIYVIPI  218 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~---~dg~i~iw~~~~  218 (221)
                      ++++.+..-.               +|.+ .-..+.|-.+|.++.||-   .+.++-+||-..
T Consensus       203 r~~~~v~e~~---------------~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~n  250 (472)
T KOG0303|consen  203 RRGTVVSEGV---------------AHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNN  250 (472)
T ss_pred             CCCcEeeecc---------------cccCCCcceeEEeccCceeeeccccccccceeccCccc
Confidence            9888765432               2221 234566777888555554   478889998653

>KOG1063|consensus

Probab=99.86  E-value=4.7e-20  Score=138.10  Aligned_cols=201  Identities=14%  Similarity=0.207  Sum_probs=150.6

Q ss_pred             CCCceEEEEeCCC-----eEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCc----ccee
Q psy10662          1 MNSCHLAFGSADH-----CVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPN----CLRS   70 (221)
Q Consensus         1 ~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~----~~~~   70 (221)
                      |+++++|+++...     .|++|+.. .-...+.+.+|.-.|+.|+|+| +.+|++++.|+++.+|......    ....
T Consensus       535 ~~gnliASaCKS~~~ehAvI~lw~t~-~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~  613 (764)
T KOG1063|consen  535 PTGNLIASACKSSLKEHAVIRLWNTA-NWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFAC  613 (764)
T ss_pred             CCCCEEeehhhhCCccceEEEEEecc-chhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhcc
Confidence            6789999998764     58999987 5555668999999999999998 5569999999999999985432    1233


Q ss_pred             eeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCC--eeeEEEEeecccceeEeeEEEeeCceEEEEEec-----CCC
Q psy10662         71 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS--KHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-----DGD  143 (221)
Q Consensus        71 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~  143 (221)
                      .+.|..-|..+.|+|++.+++|+|.|.+|++|.....  +.+..+           ....+...|+.+++.|     .+.
T Consensus       614 ~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~-----------a~~~~~~aVTAv~~~~~~~~e~~~  682 (764)
T KOG1063|consen  614 LKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRF-----------ACLKFSLAVTAVAYLPVDHNEKGD  682 (764)
T ss_pred             ccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhh-----------chhccCCceeeEEeeccccccccc
Confidence            5789999999999999999999999999999987765  333221           2345677899999876     234


Q ss_pred             EEEEecCCCeEEEEEcCCCCceee-eeeecccccccccccccccccceeEEEEcCC--------C--cEEEEecCCCeEE
Q psy10662        144 YVACGSENNSLYIYYKGLSKHMHA-YRFDTVRSMLERDRNEDDTNEFVSAVCWRQL--------S--RVLVAANSQGIIK  212 (221)
Q Consensus       144 ~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~--~~l~~~~~dg~i~  212 (221)
                      .+++|-+.|.|.+|.......... ..+.    .........+|...|+.+.|.|.        .  ..|++|+.|..++
T Consensus       683 ~vavGle~GeI~l~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~aV~rl~w~p~~~~~~~~~~~~l~la~~g~D~~vr  758 (764)
T KOG1063|consen  683 VVAVGLEKGEIVLWRRKREHRQVTVGTFN----LDTRLCATIGPDSAVNRLLWRPTCSDDWVEDKEWLNLAVGGDDESVR  758 (764)
T ss_pred             eEEEEecccEEEEEecccccccccceeee----eccccccccChHHhhheeEeccccccccccccceeEEeeecccceeE
Confidence            788999999999998542221111 1111    11122233467888999999975        2  3469999999999


Q ss_pred             EEECC
Q psy10662        213 IYVIP  217 (221)
Q Consensus       213 iw~~~  217 (221)
                      ++++.
T Consensus       759 i~nv~  763 (764)
T KOG1063|consen  759 IFNVD  763 (764)
T ss_pred             Eeecc
Confidence            99874

>KOG1034|consensus

Probab=99.86  E-value=2.3e-20  Score=128.63  Aligned_cols=200  Identities=14%  Similarity=0.239  Sum_probs=152.1

Q ss_pred             ceEEEEeCCCeEEEEEecCCc--eeeEEEE--eccCceEEEEEe-c----CCcEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662          4 CHLAFGSADHCVHYYDLRNTK--EALAVFK--GHRKAVSYVKFL-N----KEDIVSASTDSQLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~--~~~~~~~--~~~~~i~~~~~~-~----~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~   74 (221)
                      +.+|+.+ .+.+.+|.....+  ..++...  .|......++|+ .    +-++++++.-|.|+|.|+.+++....+.+|
T Consensus        56 ~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~gh  134 (385)
T KOG1034|consen   56 QVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGH  134 (385)
T ss_pred             ceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceecc
Confidence            4556654 4578899887444  3333332  356677888887 2    234888999999999999999999999999


Q ss_pred             ccceeEEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         75 INDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        75 ~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      ...|+.+.++|+. +++++++.|..|++|++++..++..+          ....+|...|.++.|+++|.+|++++.|..
T Consensus       135 G~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~Vf----------GG~egHrdeVLSvD~~~~gd~i~ScGmDhs  204 (385)
T KOG1034|consen  135 GGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVF----------GGVEGHRDEVLSVDFSLDGDRIASCGMDHS  204 (385)
T ss_pred             CccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEe----------cccccccCcEEEEEEcCCCCeeeccCCcce
Confidence            9999999999976 58899999999999999999998776          346799999999999999999999999999


Q ss_pred             EEEEEcCCCCce----eeeeeeccccc---------ccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        154 LYIYYKGLSKHM----HAYRFDTVRSM---------LERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       154 i~~~d~~~~~~~----~~~~~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      +++|++...+..    ..+.+.+.+..         .....+..-|...|-++.|-  |.++++-|.++.|..|..
T Consensus       205 lk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~p  278 (385)
T KOG1034|consen  205 LKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKP  278 (385)
T ss_pred             EEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEec
Confidence            999999854322    22222222211         11111233466666666663  689999999999999986

>KOG1538|consensus

Probab=99.85  E-value=9.7e-20  Score=136.63  Aligned_cols=200  Identities=18%  Similarity=0.261  Sum_probs=142.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccc--------eee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCL--------RSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~--------~~~   71 (221)
                      |||..|+.+. +..+.+||.. .+..+.++++|++-|.+++|+ ++..+++|+.|..|.+|+-+-...+        +.+
T Consensus        22 PDGsqL~lAA-g~rlliyD~n-dG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCM   99 (1081)
T KOG1538|consen   22 PDGTQLILAA-GSRLLVYDTS-DGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCM   99 (1081)
T ss_pred             CCCceEEEec-CCEEEEEeCC-CcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEe
Confidence            8999888875 4578999998 788999999999999999999 4677999999999999986422111        000


Q ss_pred             ---------------------------ecc--ccceeEEEEeCCCCEEEEecCCCeEEEEECCCC------------eee
Q psy10662         72 ---------------------------VGH--INDKNFVGLATDGDYVACGSENNSLYIYYKGLS------------KHM  110 (221)
Q Consensus        72 ---------------------------~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~------------~~~  110 (221)
                                                 ..|  ...+.+++|..||.+++.|-.+|+|.+-+-...            +++
T Consensus       100 sFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspi  179 (1081)
T KOG1538|consen  100 SFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPI  179 (1081)
T ss_pred             ecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCc
Confidence                                       011  235677788889999999999999998764322            233


Q ss_pred             EEEEeeccccee-----------------------EeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceee
Q psy10662        111 HAYRFDTVRSML-----------------------ESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA  167 (221)
Q Consensus       111 ~~~~~~~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~  167 (221)
                      ..+.|.+....-                       +..-..-.-...|+.+.|+|.+++.|+.|+.+.+|- +.+-.+.+
T Consensus       180 wsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGT  258 (1081)
T KOG1538|consen  180 WSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGT  258 (1081)
T ss_pred             eEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEee
Confidence            333333322110                       000011112345777888999999999999999984 22322222


Q ss_pred             eeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        168 YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +               ...+.+|..++..|++++++.|+.||+|..|++-.
T Consensus       259 v---------------g~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~f  294 (1081)
T KOG1538|consen  259 V---------------GEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIF  294 (1081)
T ss_pred             c---------------cccceeEEEEEEccCCceEEEEEccCeeehhhhHH
Confidence            2               23567999999999999999999999999998753

>KOG2110|consensus

Probab=99.85  E-value=1.4e-18  Score=121.64  Aligned_cols=205  Identities=14%  Similarity=0.175  Sum_probs=143.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEec---cCceEEEEEecC-CcEEE--ecCCCcEEEEEcCCCccceeeeccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGH---RKAVSYVKFLNK-EDIVS--ASTDSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~---~~~i~~~~~~~~-~~l~s--~~~d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      +.++|+++-.+ .|+|||+. ..+++.++..-   ...+.++.++++ .+++-  ....|.|.+||+.+.+.+..+..|+
T Consensus        96 Nr~RLvV~Lee-~IyIydI~-~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~  173 (391)
T KOG2110|consen   96 NRKRLVVCLEE-SIYIYDIK-DMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHK  173 (391)
T ss_pred             ccceEEEEEcc-cEEEEecc-cceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecC
Confidence            45677777555 59999998 78888877643   344556655543 35552  3447999999999999999999999


Q ss_pred             cceeEEEEeCCCCEEEEecCCCe-EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         76 NDKNFVGLATDGDYVACGSENNS-LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      +++.+++|+++|.++|++++.|+ |+|+.+.+++.+++|+    ++       -....|.+++|+|++++|++.++.++|
T Consensus       174 ~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFR----RG-------~~~~~IySL~Fs~ds~~L~~sS~TeTV  242 (391)
T KOG2110|consen  174 GPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFR----RG-------TYPVSIYSLSFSPDSQFLAASSNTETV  242 (391)
T ss_pred             CceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeee----CC-------ceeeEEEEEEECCCCCeEEEecCCCeE
Confidence            99999999999999999999996 7899999999988872    11       124568899999999999999999999


Q ss_pred             EEEEcCCCCceeeeeeec------------cc-------ccccc---cccccccccce-eEEEEc--CCCcEEEEecCCC
Q psy10662        155 YIYYKGLSKHMHAYRFDT------------VR-------SMLER---DRNEDDTNEFV-SAVCWR--QLSRVLVAANSQG  209 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~------------~~-------~~~~~---~~~~~~~~~~v-~~~~~~--~~~~~l~~~~~dg  209 (221)
                      .+|.+........-....            ..       ..+..   .....-..... ..+.+.  +....+..++.||
T Consensus       243 HiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG  322 (391)
T KOG2110|consen  243 HIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDG  322 (391)
T ss_pred             EEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEEEEEcCC
Confidence            999886543111100000            00       00000   00000111111 233444  4678899999999


Q ss_pred             eEEEEECCcc
Q psy10662        210 IIKIYVIPIR  219 (221)
Q Consensus       210 ~i~iw~~~~~  219 (221)
                      .+..|.++.+
T Consensus       323 ~~y~y~l~~~  332 (391)
T KOG2110|consen  323 HLYSYRLPPK  332 (391)
T ss_pred             eEEEEEcCCC
Confidence            9999999753

>KOG1009|consensus

Probab=99.85  E-value=1.6e-20  Score=132.50  Aligned_cols=190  Identities=18%  Similarity=0.245  Sum_probs=144.2

Q ss_pred             ceEEEEeCCCeEEEEEecCC---c-----eeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcC--------C--
Q psy10662          4 CHLAFGSADHCVHYYDLRNT---K-----EALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNIN--------K--   64 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~---~-----~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~--------~--   64 (221)
                      +.||||+.|..|++|-++..   +     +-+..+..|...|+++.|+| +..|++|+.+|.+.+|-..        +  
T Consensus        27 ~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~  106 (434)
T KOG1009|consen   27 NKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEA  106 (434)
T ss_pred             cceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchh
Confidence            38999999999999988621   1     23446678999999999998 5668999999999999875        2  


Q ss_pred             ------CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEE
Q psy10662         65 ------PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL  138 (221)
Q Consensus        65 ------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  138 (221)
                            ....+.+.+|...+..++|+|++.++++++.|+.+++||+..++....             +..|...+..++|
T Consensus       107 ~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~-------------~~dh~~yvqgvaw  173 (434)
T KOG1009|consen  107 DLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAI-------------LDDHEHYVQGVAW  173 (434)
T ss_pred             hhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEee-------------ccccccccceeec
Confidence                  112234567889999999999999999999999999999998887765             4789999999999


Q ss_pred             ecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc--------cccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        139 ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV--------RSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       139 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      .|-++++++-+.|...+.+.+......+.......        ......+..-+.-......++|+|+|.+|++.+
T Consensus       174 Dpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa  249 (434)
T KOG1009|consen  174 DPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA  249 (434)
T ss_pred             chhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence            99999999999999888888877665554431110        000001100011123456789999999999875

>KOG2394|consensus

Probab=99.84  E-value=6e-20  Score=134.07  Aligned_cols=166  Identities=18%  Similarity=0.233  Sum_probs=120.2

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEE----eccCceEEEEEec--CCcEEEecCCCcEEEEEcCCC----------
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFK----GHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKP----------   65 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~----~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~----------   65 (221)
                      .+--|+.|-.-|.|.+.|... .+..+.+.    -.+..|+|+.|-|  +..++.+-.+|.+++||....          
T Consensus       184 ~g~dllIGf~tGqvq~idp~~-~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~  262 (636)
T KOG2394|consen  184 KGLDLLIGFTTGQVQLIDPIN-FEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQA  262 (636)
T ss_pred             CCcceEEeeccCceEEecchh-hHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccc
Confidence            345577777888898888762 22111111    1347899999997  455778888999999986321          


Q ss_pred             ------------------ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         66 ------------------NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        66 ------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                                        .++....-..+.|+.++|+|||++||+.+.||.++|+|..+.+.+..             ++
T Consensus       263 ~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~-------------mk  329 (636)
T KOG2394|consen  263 LKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGV-------------MK  329 (636)
T ss_pred             cCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHH-------------HH
Confidence                              11111112245788999999999999999999999999887665433             23


Q ss_pred             EeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc
Q psy10662        128 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR  196 (221)
Q Consensus       128 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  196 (221)
                      ..-+...|++|+|||++|++|++|-.|.||.+...+.+..-               ++|..+|+.++|+
T Consensus       330 SYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARG---------------qGHkSWVs~VaFD  383 (636)
T KOG2394|consen  330 SYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARG---------------QGHKSWVSVVAFD  383 (636)
T ss_pred             hhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEec---------------cccccceeeEeec
Confidence            44567899999999999999999999999998766554322               3677788888777

>KOG1523|consensus

Probab=99.84  E-value=5.1e-19  Score=121.66  Aligned_cols=209  Identities=12%  Similarity=0.127  Sum_probs=154.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCC-C--ccceeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINK-P--NCLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~-~--~~~~~~~~~   74 (221)
                      +|+..+|++.....|.||......  +..++++.|...|+.+.|+| .+.|++|+.|..-++|.... +  ++...+..+
T Consensus        20 ~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRi   99 (361)
T KOG1523|consen   20 SDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRI   99 (361)
T ss_pred             CCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEe
Confidence            477899999999999999987433  57788999999999999998 56899999999999999843 3  344456678


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      +...+++.|+|.++.||+|+....|.||-++..+.-..         ....-..+.+.|++++|+|++-++++|+.|+..
T Consensus       100 NrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWV---------sKhikkPirStv~sldWhpnnVLlaaGs~D~k~  170 (361)
T KOG1523|consen  100 NRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWV---------SKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKC  170 (361)
T ss_pred             ccceeeEeecCcCceEEeccCccEEEEEEEecccceeh---------hhhhCCccccceeeeeccCCcceecccccCcce
Confidence            99999999999999999999999999997654322110         001113456789999999999999999999999


Q ss_pred             EEEEcCCCCce---eeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        155 YIYYKGLSKHM---HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       155 ~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++|..--....   ..-.+...-..-..........+.+..+.|+|+|..|+-.+.|..+.+-|...
T Consensus       171 rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~  237 (361)
T KOG1523|consen  171 RVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAG  237 (361)
T ss_pred             eEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCC
Confidence            99964211100   00000000001111122224567899999999999999999999998877654

>KOG0290|consensus

Probab=99.84  E-value=9.6e-20  Score=123.83  Aligned_cols=189  Identities=13%  Similarity=0.133  Sum_probs=139.0

Q ss_pred             ceEEEEeCCCeEEEEEecCCc---eeeEEE-----EeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCcc---cee
Q psy10662          4 CHLAFGSADHCVHYYDLRNTK---EALAVF-----KGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNC---LRS   70 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~---~~~~~~-----~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~---~~~   70 (221)
                      .+||+.+  ..+|+|.+....   .+...+     ..+..++++..|+.  .+++.+.+-|-+..|||++++..   ...
T Consensus       114 dlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQ  191 (364)
T KOG0290|consen  114 DLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQ  191 (364)
T ss_pred             chhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeE
Confidence            4566653  379999987311   111122     23567899999983  56788999999999999998733   345


Q ss_pred             eeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEe
Q psy10662         71 FVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACG  148 (221)
Q Consensus        71 ~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~  148 (221)
                      +-.|..+|..++|...+. .||+.+.||.|+++|++..+.-..+.          .-.....+...++|++ |.+++|+-
T Consensus       192 LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIY----------E~p~~~~pLlRLswnkqDpnymATf  261 (364)
T KOG0290|consen  192 LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIY----------EDPSPSTPLLRLSWNKQDPNYMATF  261 (364)
T ss_pred             EEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEe----------cCCCCCCcceeeccCcCCchHHhhh
Confidence            668999999999998554 78999999999999998765433321          1111245667788876 56688876


Q ss_pred             cCC-CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC-CcEEEEecCCCeEEEEECCc
Q psy10662        149 SEN-NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       149 ~~d-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ..| ..|.+.|++...              .++..+.+|.+.|++++|.|. ...|++++.|.+..+||+++
T Consensus       262 ~~dS~~V~iLDiR~P~--------------tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q  319 (364)
T KOG0290|consen  262 AMDSNKVVILDIRVPC--------------TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ  319 (364)
T ss_pred             hcCCceEEEEEecCCC--------------cceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence            665 468899986443              234456689999999999995 57899999999999999975

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.84  E-value=5e-18  Score=128.15  Aligned_cols=188  Identities=20%  Similarity=0.413  Sum_probs=149.8

Q ss_pred             eEEEEeC-CCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecC-CCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          5 HLAFGSA-DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAST-DSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         5 ~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~-d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      .++..+. |+.+.+|+..........+..|...|..++|+|++ .+++++. |+.+++|++..+..+..+..|...+.++
T Consensus       125 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  204 (466)
T COG2319         125 ILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSL  204 (466)
T ss_pred             EEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEE
Confidence            4444344 99999999983267778888999999999999866 5777775 9999999999888888888899999999


Q ss_pred             EEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         82 GLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        82 ~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      +|+|++. .+++++.|+.+.+||...+..+..            .+.+|.... ...|+|++.++++++.|+.+++|++.
T Consensus       205 ~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~  271 (466)
T COG2319         205 AFSPDGGLLIASGSSDGTIRLWDLSTGKLLRS------------TLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLR  271 (466)
T ss_pred             EEcCCcceEEEEecCCCcEEEEECCCCcEEee------------ecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeec
Confidence            9999998 555559999999998876655542            234555554 33899999899999999999999998


Q ss_pred             CCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        161 LSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       161 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .... ...+               ..|...+.++.|+|++..+++++.|+.+++|++.+..
T Consensus       272 ~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  317 (466)
T COG2319         272 SSSSLLRTL---------------SGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGK  317 (466)
T ss_pred             CCCcEEEEE---------------ecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCc
Confidence            6665 1111               2567789999999988888888889999999887653

>KOG0650|consensus

Probab=99.84  E-value=1.6e-19  Score=133.40  Aligned_cols=199  Identities=15%  Similarity=0.187  Sum_probs=142.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC--cEEEecCCCcEEEEEcCCC-------------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE--DIVSASTDSQLKLWNINKP-------------   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~-------------   65 (221)
                      |.|..||+|+.||+|+||.+. ++.+++.+. ..+.|.|++|+|..  -+++++.+..+.+-+..-|             
T Consensus       410 p~G~wlasGsdDGtvriWEi~-TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~  487 (733)
T KOG0650|consen  410 PSGEWLASGSDDGTVRIWEIA-TGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTKELLA  487 (733)
T ss_pred             CCcceeeecCCCCcEEEEEee-cceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCccccchhhhcchhhhhh
Confidence            568899999999999999999 899999887 56789999999743  2555555444555443111             


Q ss_pred             ------------------------ccceeeeccccceeEEEEeCCCCEEEEecCC---CeEEEEECCCCeeeEEE-----
Q psy10662         66 ------------------------NCLRSFVGHINDKNFVGLATDGDYVACGSEN---NSLYIYYKGLSKHMHAY-----  113 (221)
Q Consensus        66 ------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~-----  113 (221)
                                              .-++..-.|...|..+.|+..|.||++...+   ..|.|+++...+....|     
T Consensus       488 ~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG  567 (733)
T KOG0650|consen  488 SAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKG  567 (733)
T ss_pred             cCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCC
Confidence                                    0011223477889999999999999987653   56889988654433222     


Q ss_pred             -----Eeecccc------------------eeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        114 -----RFDTVRS------------------MLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       114 -----~~~~~~~------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                           .|.+...                  ..++.+......|..++.+|.|.-|+.|+.|+.+..||+.....      
T Consensus       568 ~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlssk------  641 (733)
T KOG0650|consen  568 LVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSK------  641 (733)
T ss_pred             ceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcc------
Confidence                 2222221                  11122223344577899999999999999999999999864432      


Q ss_pred             ecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        171 DTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                              +...+..|...+++++|++.-.++++|+.||.+.++.
T Consensus       642 --------Pyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfh  678 (733)
T KOG0650|consen  642 --------PYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFH  678 (733)
T ss_pred             --------hhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence                    2334457889999999999999999999999999875

>KOG1009|consensus

Probab=99.83  E-value=9.1e-20  Score=128.77  Aligned_cols=171  Identities=18%  Similarity=0.405  Sum_probs=135.5

Q ss_pred             cCceEEEEEec--CCcEEEecCCCcEEEEEcCCCcc---------ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEE
Q psy10662         34 RKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNC---------LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  102 (221)
Q Consensus        34 ~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw  102 (221)
                      ..++.++.|.+  .+.++||+.|..|++|-+...+.         ...+..|...|+++.|+|+|+++|+|+.+|.|.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            46799999985  34799999999999999865422         23456799999999999999999999999999999


Q ss_pred             ECCCCeee---EEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccc
Q psy10662        103 YKGLSKHM---HAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLER  179 (221)
Q Consensus       103 d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~  179 (221)
                      -...-...   .....+.......+.+.+|...+..++|+|+++++++++.|..+++||+..+.....+.          
T Consensus        93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~----------  162 (434)
T KOG1009|consen   93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILD----------  162 (434)
T ss_pred             EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecc----------
Confidence            76521110   00001122344556677899999999999999999999999999999999888766553          


Q ss_pred             cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        180 DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       180 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                           +|...+..++|.|-++++++-+.|...+.+.+...
T Consensus       163 -----dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~  197 (434)
T KOG1009|consen  163 -----DHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLK  197 (434)
T ss_pred             -----ccccccceeecchhhhhhhhhccCcccceeeeeee
Confidence                 78889999999999999999999887777766543

>KOG1007|consensus

Probab=99.83  E-value=9.6e-19  Score=118.97  Aligned_cols=189  Identities=12%  Similarity=0.156  Sum_probs=138.7

Q ss_pred             CCceEEEEeCC-------CeEEEEEecCCce--------eeEEEE-eccCceEEEEEecCCcEEEecCCCcEEEEEcCCC
Q psy10662          2 NSCHLAFGSAD-------HCVHYYDLRNTKE--------ALAVFK-GHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP   65 (221)
Q Consensus         2 ~~~~l~~~~~d-------g~i~i~~~~~~~~--------~~~~~~-~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~   65 (221)
                      |.++|+++..+       ..+.||.+.....        ++..+. .+-+.|.|+.|.|++.-+++-.|..|.+|++..+
T Consensus        75 d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~dn~i~l~~l~es  154 (370)
T KOG1007|consen   75 DQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASMDDNNIVLWSLDES  154 (370)
T ss_pred             CCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEeccCceEEEEcccC
Confidence            45677776552       2467898874322        223332 4556899999998655334445999999999876


Q ss_pred             cc-ceeee-----ccccceeEEEEeC--CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662         66 NC-LRSFV-----GHINDKNFVGLAT--DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG  137 (221)
Q Consensus        66 ~~-~~~~~-----~~~~~v~~~~~~~--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  137 (221)
                      .. +..+.     .+....++-+|+|  +++.+++. .|+++..||+++.++...+            -..|...+..+.
T Consensus       155 s~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI------------~dAHgq~vrdlD  221 (370)
T KOG1007|consen  155 SKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSI------------EDAHGQRVRDLD  221 (370)
T ss_pred             cchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcch------------hhhhcceeeecc
Confidence            55 33332     2455678888988  56666665 5788999999987776554            357888899999


Q ss_pred             EecCCC-EEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC-CcEEEEecCCCeEEEEE
Q psy10662        138 LATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYV  215 (221)
Q Consensus       138 ~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~  215 (221)
                      |+|+.+ +|++|+.||.|++||.+..+              .++..+.+|..+|.++.|+|. .+++.+++.|..|.+|-
T Consensus       222 fNpnkq~~lvt~gDdgyvriWD~R~tk--------------~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsc  287 (370)
T KOG1007|consen  222 FNPNKQHILVTCGDDGYVRIWDTRKTK--------------FPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSC  287 (370)
T ss_pred             CCCCceEEEEEcCCCccEEEEeccCCC--------------ccccccCCCceEEEEEEecCccceEEEecCCCceeEEEe
Confidence            999876 57899999999999987544              244556689999999999994 57888999999999997


Q ss_pred             CC
Q psy10662        216 IP  217 (221)
Q Consensus       216 ~~  217 (221)
                      ..
T Consensus       288 a~  289 (370)
T KOG1007|consen  288 AS  289 (370)
T ss_pred             cc
Confidence            64

>KOG0644|consensus

Probab=99.82  E-value=3.5e-20  Score=141.65  Aligned_cols=196  Identities=14%  Similarity=0.217  Sum_probs=155.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      .|.++++|+.|..++||.++ +..++....+|++.|+.++.+. +-.+++++.|..|++|.+..+.++..+.+|.+.|++
T Consensus       201 tg~~Iitgsdd~lvKiwS~e-t~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavta  279 (1113)
T KOG0644|consen  201 TGRYIITGSDDRLVKIWSME-TARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTA  279 (1113)
T ss_pred             ccceEeecCccceeeeeecc-chhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceee
Confidence            47899999999999999987 7889999999999999999985 455889999999999999999999999999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeE--------------EEE--------------------------------
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMH--------------AYR--------------------------------  114 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--------------~~~--------------------------------  114 (221)
                      ++|+|-.    +.+.||++++||.+-.-.+.              .+.                                
T Consensus       280 iafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~l  355 (1113)
T KOG0644|consen  280 IAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLL  355 (1113)
T ss_pred             eccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccce
Confidence            9999964    77899999999976111000              000                                


Q ss_pred             ------------------------eecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeee
Q psy10662        115 ------------------------FDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       115 ------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~  169 (221)
                                              |+...++..+.+.+|...+..+.++| +.+...+++.||...|||+-.+..+..+.
T Consensus       356 if~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~  435 (1113)
T KOG0644|consen  356 IFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYF  435 (1113)
T ss_pred             EEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeee
Confidence                                    22222233344456778888899998 55566789999999999998888776664


Q ss_pred             eecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        170 FDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                                    .+|. .+...+||++|..++....-|.+.|....
T Consensus       436 --------------~gh~-kl~d~kFSqdgts~~lsd~hgql~i~g~g  468 (1113)
T KOG0644|consen  436 --------------IGHG-KLVDGKFSQDGTSIALSDDHGQLYILGTG  468 (1113)
T ss_pred             --------------cccc-eeeccccCCCCceEecCCCCCceEEeccC
Confidence                          1333 45678899999998888888888887654

>KOG0290|consensus

Probab=99.82  E-value=6.1e-18  Score=115.18  Aligned_cols=189  Identities=11%  Similarity=0.111  Sum_probs=137.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCC--ceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCccceeeec---c
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNT--KEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPNCLRSFVG---H   74 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~~~---~   74 (221)
                      |.+++.+.+-|-+..|||++..  +.....+-+|..+|..++|..+  +.+++++.||.+++||++..+--..+..   .
T Consensus       162 dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~  241 (364)
T KOG0290|consen  162 DPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSP  241 (364)
T ss_pred             CcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCC
Confidence            5678999999999999999942  2345667789999999999963  4599999999999999998654433322   2


Q ss_pred             ccceeEEEEeCCC-CEEEEecCC-CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCC
Q psy10662         75 INDKNFVGLATDG-DYVACGSEN-NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSEN  151 (221)
Q Consensus        75 ~~~v~~~~~~~~~-~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d  151 (221)
                      ..+...++|+++. +++|+-..| ..|.|.|++....            ++..+.+|...|+.++|.| ....|++++.|
T Consensus       242 ~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~t------------pva~L~~H~a~VNgIaWaPhS~~hictaGDD  309 (364)
T KOG0290|consen  242 STPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCT------------PVARLRNHQASVNGIAWAPHSSSHICTAGDD  309 (364)
T ss_pred             CCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCc------------ceehhhcCcccccceEecCCCCceeeecCCc
Confidence            4467888888765 466665544 5699999986433            3345789999999999999 45689999999


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEE
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKI  213 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i  213 (221)
                      ..+.+||+.+.-..         ....++.... ....|+.+.|++ .+.+++.+. ++++.+
T Consensus       310 ~qaliWDl~q~~~~---------~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~-~kklei  361 (364)
T KOG0290|consen  310 CQALIWDLQQMPRE---------NGEDPILAYT-AGGEVNQIQWSSSQPDWIAICF-GKKLEI  361 (364)
T ss_pred             ceEEEEeccccccc---------CCCCchhhhh-ccceeeeeeecccCCCEEEEEe-cCeeeE
Confidence            99999998754320         0111111111 355799999996 567888775 444444

>KOG0650|consensus

Probab=99.81  E-value=4.5e-19  Score=131.12  Aligned_cols=194  Identities=15%  Similarity=0.229  Sum_probs=151.6

Q ss_pred             CCceEEEEeCC---CeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          2 NSCHLAFGSAD---HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      .|.+|++...+   ..|.|+++. ..+...-|+...+.|.++.|+|....+..+....|++||+...+.++.+......|
T Consensus       532 kGDYlatV~~~~~~~~VliHQLS-K~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwi  610 (733)
T KOG0650|consen  532 KGDYLATVMPDSGNKSVLIHQLS-KRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWI  610 (733)
T ss_pred             CCceEEEeccCCCcceEEEEecc-cccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeee
Confidence            57888887654   478899987 44444566667788999999996655555567889999999988888877677789


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ..++.+|.|..++.++.|+.+..+|+......            .+.+..|...+++++|++.-.++++|+.||.+.||-
T Consensus       611 S~msihp~GDnli~gs~d~k~~WfDldlsskP------------yk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfh  678 (733)
T KOG0650|consen  611 SSMSIHPNGDNLILGSYDKKMCWFDLDLSSKP------------YKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFH  678 (733)
T ss_pred             eeeeecCCCCeEEEecCCCeeEEEEcccCcch------------hHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence            99999999999999999999999998755332            234578899999999999999999999999999884


Q ss_pred             cCCCCceeeeeeecccccccccccccccccc----eeEEEEcCCCcEEEEecCCCeEEEE
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEF----VSAVCWRQLSRVLVAANSQGIIKIY  214 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~dg~i~iw  214 (221)
                      -.--..+      .....+.++..+.+|...    |..+.|+|...+|++++.||+|++|
T Consensus       679 g~VY~Dl------~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  679 GMVYNDL------LQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             eeeehhh------hcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence            2211000      012334445556677655    8999999999999999999999998

>KOG2919|consensus

Probab=99.81  E-value=1.3e-18  Score=120.06  Aligned_cols=179  Identities=15%  Similarity=0.282  Sum_probs=135.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCcee--e-EEE----EeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEA--L-AVF----KGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~--~-~~~----~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      |||..|.+| ....|++||+...+.-  + .++    .+..+-|.+++|+|  .+.++.++....+-+|.-....++..+
T Consensus       168 ~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~ll  246 (406)
T KOG2919|consen  168 PDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLL  246 (406)
T ss_pred             CCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeee
Confidence            789999887 5679999999534321  1 122    12367799999998  356899999999999998888999989


Q ss_pred             eccccceeEEEEeCCCCEEEEecC-CCeEEEEECCCCe-eeEEEEeecccceeEeeEEEeeC---ceEEEEEecCCCEEE
Q psy10662         72 VGHINDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSK-HMHAYRFDTVRSMLESSFVGHIN---DKNFVGLATDGDYVA  146 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~  146 (221)
                      -+|.+.|+.+.|.++|+.|++|+. +-.|..||++..+ ++..             +..|..   .-.-+...|++++|+
T Consensus       247 ggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~-------------L~rhv~~TNQRI~FDld~~~~~La  313 (406)
T KOG2919|consen  247 GGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYA-------------LERHVGDTNQRILFDLDPKGEILA  313 (406)
T ss_pred             cccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhh-------------hhhhccCccceEEEecCCCCceee
Confidence            999999999999999999999875 6789999998543 2222             233333   222355579999999


Q ss_pred             EecCCCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        147 CGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       147 ~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      +|+.||.|++||++.. .....+               ..+...++.++++|--.++++++..
T Consensus       314 sG~tdG~V~vwdlk~~gn~~sv~---------------~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  314 SGDTDGSVRVWDLKDLGNEVSVT---------------GNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             ccCCCccEEEEecCCCCCccccc---------------ccccccccceecCcccceeeeccCc
Confidence            9999999999999763 322222               3567789999999998888887654

>KOG1188|consensus

Probab=99.81  E-value=1e-18  Score=121.07  Aligned_cols=148  Identities=12%  Similarity=0.240  Sum_probs=119.7

Q ss_pred             CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeC--CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeE
Q psy10662         46 EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLAT--DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE  123 (221)
Q Consensus        46 ~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~  123 (221)
                      ..++++...|.|++||..+++.+..+++++..++.++|..  ....+.+++.||+|++||+++......+.|        
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~--------  112 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISW--------  112 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheec--------
Confidence            3488888999999999999999999999999999999976  456799999999999999998777655532        


Q ss_pred             eeEEEee-CceEEEEEecCCCEEEEecC----CCeEEEEEcCCCCc-eeeeeeecccccccccccccccccceeEEEEcC
Q psy10662        124 SSFVGHI-NDKNFVGLATDGDYVACGSE----NNSLYIYYKGLSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ  197 (221)
Q Consensus       124 ~~~~~~~-~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  197 (221)
                         ..+. .+..+++..-.++.+++|.+    +-.+.+||.+..+. +..+              .+.|...|++++|+|
T Consensus       113 ---~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~--------------~eSH~DDVT~lrFHP  175 (376)
T KOG1188|consen  113 ---TQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQL--------------NESHNDDVTQLRFHP  175 (376)
T ss_pred             ---cCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhh--------------hhhccCcceeEEecC
Confidence               2333 35566666667788888874    67899999987765 3333              236888999999999


Q ss_pred             -CCcEEEEecCCCeEEEEECCc
Q psy10662        198 -LSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       198 -~~~~l~~~~~dg~i~iw~~~~  218 (221)
                       +.++|++||.||-|.++|+..
T Consensus       176 ~~pnlLlSGSvDGLvnlfD~~~  197 (376)
T KOG1188|consen  176 SDPNLLLSGSVDGLVNLFDTKK  197 (376)
T ss_pred             CCCCeEEeecccceEEeeecCC
Confidence             568999999999999999864

>KOG1523|consensus

Probab=99.81  E-value=6.6e-18  Score=116.28  Aligned_cols=166  Identities=11%  Similarity=0.185  Sum_probs=133.3

Q ss_pred             EEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCc---cceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEEC
Q psy10662         29 VFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPN---CLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  104 (221)
Q Consensus        29 ~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~  104 (221)
                      .+.--..+|+|.+|++++. ++.+.....|.||.....+   ...++..|...|+.++|+|..+.|++++.|..-++|..
T Consensus         5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~   84 (361)
T KOG1523|consen    5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ   84 (361)
T ss_pred             EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence            3444567899999997554 7777778899999987654   56778889999999999999999999999999999988


Q ss_pred             -CCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662        105 -GLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE  183 (221)
Q Consensus       105 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
                       ..++...++           .+..++...+++.|+|.++.+|+|+..+.|.+|-++...           ..+.....-
T Consensus        85 ~~~~~Wkptl-----------vLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~EN-----------dWWVsKhik  142 (361)
T KOG1523|consen   85 PSGGTWKPTL-----------VLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQEN-----------DWWVSKHIK  142 (361)
T ss_pred             CCCCeeccce-----------eEEEeccceeeEeecCcCceEEeccCccEEEEEEEeccc-----------ceehhhhhC
Confidence             444443332           456788899999999999999999999999999654332           222222233


Q ss_pred             cccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        184 DDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       184 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      ..+...|.+++|+|++-+|++|+.|+..+++..
T Consensus       143 kPirStv~sldWhpnnVLlaaGs~D~k~rVfSa  175 (361)
T KOG1523|consen  143 KPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSA  175 (361)
T ss_pred             CccccceeeeeccCCcceecccccCcceeEEEE
Confidence            456788999999999999999999999999875

>KOG4328|consensus

Probab=99.81  E-value=2.8e-18  Score=123.06  Aligned_cols=194  Identities=13%  Similarity=0.182  Sum_probs=138.7

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCcc----ceeeeccccc
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNC----LRSFVGHIND   77 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~----~~~~~~~~~~   77 (221)
                      ..++.|..=|...+||++..+.....+.-|+..|.+++++|  ...|+|++.|++++|||++....    ......|...
T Consensus       292 ~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~Hrrs  371 (498)
T KOG4328|consen  292 RSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRS  371 (498)
T ss_pred             ccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccce
Confidence            34555666678999999966766777788999999999998  45699999999999999986432    2334579999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECC----CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKG----LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      |.+..|+|.+..|++.+.|..|+|||..    .-.+..++..+...++        --.....+|.|+..+|++|..-..
T Consensus       372 V~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~R--------wlT~fKA~W~P~~~li~vg~~~r~  443 (498)
T KOG4328|consen  372 VNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGR--------WLTPFKAAWDPDYNLIVVGRYPRP  443 (498)
T ss_pred             eeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccc--------cccchhheeCCCccEEEEeccCcc
Confidence            9999999999889999999999999973    2222222211111111        112335689999999999999999


Q ss_pred             EEEEEcCCCCceeeeeeecccccccccccccccccceeE-EEEcCCCcEE-EEecCCCeEEEEECCcc
Q psy10662        154 LYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSA-VCWRQLSRVL-VAANSQGIIKIYVIPIR  219 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l-~~~~~dg~i~iw~~~~~  219 (221)
                      |-++|-..++.+..+-              ......|.+ ..|+|-+..+ +.++..|.|++|.-+.+
T Consensus       444 IDv~~~~~~q~v~el~--------------~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k~~  497 (498)
T KOG4328|consen  444 IDVFDGNGGQMVCELH--------------DPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNKKS  497 (498)
T ss_pred             eeEEcCCCCEEeeecc--------------CccccccccceeecccccceeccCCccceEEEEecCCC
Confidence            9999976665443331              011123333 4799988844 45556899999976543

>KOG1272|consensus

Probab=99.81  E-value=6e-20  Score=131.91  Aligned_cols=185  Identities=14%  Similarity=0.122  Sum_probs=156.3

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      +|.+|+.|+..|.|..+|.. ++++...+. -...|.++.|.....++++.....++||| ..|..+..++.| ..|..+
T Consensus       140 nGrhlllgGrKGHlAa~Dw~-t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVAQK~y~yvYD-~~GtElHClk~~-~~v~rL  215 (545)
T KOG1272|consen  140 NGRHLLLGGRKGHLAAFDWV-TKKLHFEIN-VMETVRDVTFLHNEQFFAVAQKKYVYVYD-NNGTELHCLKRH-IRVARL  215 (545)
T ss_pred             CccEEEecCCccceeeeecc-cceeeeeee-hhhhhhhhhhhcchHHHHhhhhceEEEec-CCCcEEeehhhc-Cchhhh
Confidence            68999999999999999998 777777776 35678999998666677778889999999 467777777755 468999


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      .|-|..-+|++++..|.++--|+.+|+.+..+             ....+.+..+.-+|-...+-+|...|+|.+|.-..
T Consensus       216 eFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~-------------~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~s  282 (545)
T KOG1272|consen  216 EFLPYHFLLVAASEAGFLKYQDVSTGKLVASI-------------RTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNS  282 (545)
T ss_pred             cccchhheeeecccCCceEEEeechhhhhHHH-------------HccCCccchhhcCCccceEEEcCCCceEEecCCCC
Confidence            99999888999999999999999999887664             44456777888899888999999999999998665


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+++.               .+-.|.++|.++++.++|+|++|.+.|..++|||+++
T Consensus       283 kePLv---------------KiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~  324 (545)
T KOG1272|consen  283 KEPLV---------------KILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRN  324 (545)
T ss_pred             cchHH---------------HHHhcCCCcceEEECCCCcEEeecccccceeEeeecc
Confidence            55432               2336899999999999999999999999999999975

>KOG4378|consensus

Probab=99.81  E-value=4.8e-18  Score=123.41  Aligned_cols=168  Identities=13%  Similarity=0.141  Sum_probs=135.1

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEecc-CceEEEEEecCC--cEEEecCCCcEEEEEcCCCccceee-eccccce
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-KAVSYVKFLNKE--DIVSASTDSQLKLWNINKPNCLRSF-VGHINDK   78 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v   78 (221)
                      ..+||+++..|.|.|..+. ++.....|.... ..|.-+.|++..  .|.+++.+|.|.+||+....++... ..|..+.
T Consensus       133 DeyiAsvs~gGdiiih~~~-t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~  211 (673)
T KOG4378|consen  133 DEYIASVSDGGDIIIHGTK-TKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPC  211 (673)
T ss_pred             cceeEEeccCCcEEEEecc-cCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCc
Confidence            4689999999999999997 565556666433 346689999743  3778999999999999887777655 6799999


Q ss_pred             eEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         79 NFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        79 ~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      ..++|+|... +|++.+.|..|.+||.+..+....+              ....+...++|.++|.+|++|+..|.|..|
T Consensus       212 ~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l--------------~y~~Plstvaf~~~G~~L~aG~s~G~~i~Y  277 (673)
T KOG4378|consen  212 RGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRL--------------TYSHPLSTVAFSECGTYLCAGNSKGELIAY  277 (673)
T ss_pred             CcceecCCccceEEEecccceEEEeeccccccccee--------------eecCCcceeeecCCceEEEeecCCceEEEE
Confidence            9999999776 6789999999999999876665443              345678899999999999999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  199 (221)
                      |++..+..              +.....|...|++++|-|..
T Consensus       278 D~R~~k~P--------------v~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  278 DMRSTKAP--------------VAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             ecccCCCC--------------ceEeeecccceeEEEeeecc
Confidence            99765532              23335788889999997764

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.80  E-value=1.2e-17  Score=112.75  Aligned_cols=132  Identities=18%  Similarity=0.277  Sum_probs=94.4

Q ss_pred             cEEEEEcCC-Cccceeeec-cccceeEEEEeCCCCEEEE--ecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC
Q psy10662         56 QLKLWNINK-PNCLRSFVG-HINDKNFVGLATDGDYVAC--GSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN  131 (221)
Q Consensus        56 ~v~~wd~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (221)
                      ...+|.++. ...+..+.- ..++|.+++|+|+|+.|++  |..++.|.+||++ .+.+..+               ...
T Consensus        38 ~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~---------------~~~  101 (194)
T PF08662_consen   38 EFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSF---------------GTQ  101 (194)
T ss_pred             eEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEee---------------cCC
Confidence            355555532 233333322 3457999999999998654  4456799999996 4444332               245


Q ss_pred             ceEEEEEecCCCEEEEecC---CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-
Q psy10662        132 DKNFVGLATDGDYVACGSE---NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-  207 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-  207 (221)
                      .+..+.|+|+|+++++++.   .|.|.+||.++.+.+....                |. .+..++|+|+|++|++++. 
T Consensus       102 ~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~----------------~~-~~t~~~WsPdGr~~~ta~t~  164 (194)
T PF08662_consen  102 PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE----------------HS-DATDVEWSPDGRYLATATTS  164 (194)
T ss_pred             CceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc----------------cC-cEEEEEEcCCCCEEEEEEec
Confidence            6778999999999999875   4679999998666554432                22 4689999999999999873 


Q ss_pred             -----CCeEEEEECCccc
Q psy10662        208 -----QGIIKIYVIPIRV  220 (221)
Q Consensus       208 -----dg~i~iw~~~~~~  220 (221)
                           |+.++||++..+.
T Consensus       165 ~r~~~dng~~Iw~~~G~~  182 (194)
T PF08662_consen  165 PRLRVDNGFKIWSFQGRL  182 (194)
T ss_pred             cceeccccEEEEEecCeE
Confidence                 7889999997554

>KOG1524|consensus

Probab=99.80  E-value=3.3e-18  Score=125.34  Aligned_cols=194  Identities=13%  Similarity=0.138  Sum_probs=139.0

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      ...|+.++.||.+.|.+-  .++..+.+.+|.+.+.+-.|+|++. |++++.||.|++|.- +|-....+.....+|+|+
T Consensus        75 ~d~~~i~s~DGkf~il~k--~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~  151 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILNK--SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCA  151 (737)
T ss_pred             cceEEEEcCCceEEEecc--cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEE
Confidence            356888899999998774  4777788899999999999998666 999999999999984 444333444456789999


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      +|.|+.+.++-+..+ .+.|=.+....             .+..+..|.+-|.++.|+|..+++++|++|-..++||..-
T Consensus       152 ~W~p~S~~vl~c~g~-h~~IKpL~~n~-------------k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G  217 (737)
T KOG1524|consen  152 RWAPNSNSIVFCQGG-HISIKPLAANS-------------KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG  217 (737)
T ss_pred             EECCCCCceEEecCC-eEEEeeccccc-------------ceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC
Confidence            999998866554333 35554433222             2234689999999999999999999999999999999542


Q ss_pred             CC---------ceeeeeeeccccccc----ccccccccccceeEEEEcCCCcEEEEecCCCeEEE
Q psy10662        162 SK---------HMHAYRFDTVRSMLE----RDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI  213 (221)
Q Consensus       162 ~~---------~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  213 (221)
                      ..         ++-.+.|.+......    ...-.....+.|..++||+||..++.|+..|.+.+
T Consensus       218 ~~Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  218 ANLFTSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             cccccCChhccceeeeeeccccceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence            11         122233333211000    01112234567899999999999999998887654

>KOG1310|consensus

Probab=99.80  E-value=1.7e-18  Score=127.15  Aligned_cols=216  Identities=15%  Similarity=0.176  Sum_probs=143.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEE-EeccCceEEEEEec---CCcEEEecCCCcEEEEEcCC----------Cc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVF-KGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINK----------PN   66 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~----------~~   66 (221)
                      .||.+|++|+.|-.+.|||.- ..+++..+ .+|...|.++.|-|   +..+++|+.|..|+++|+..          .+
T Consensus        60 ~dG~lL~SGSDD~r~ivWd~~-~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~  138 (758)
T KOG1310|consen   60 ADGELLASGSDDTRLIVWDPF-EYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEE  138 (758)
T ss_pred             CCCCEEeecCCcceEEeecch-hcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccc
Confidence            378999999999999999998 56666654 58999999999987   45688999999999999974          23


Q ss_pred             cceeeeccccceeEEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCE
Q psy10662         67 CLRSFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDY  144 (221)
Q Consensus        67 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~  144 (221)
                      ....+..|...|..++..|++ ..+.++++||+++-+|++....-..   +..-......+...--...+++.+|. ..+
T Consensus       139 ~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p---~~~~~~~l~ny~~~lielk~ltisp~rp~~  215 (758)
T KOG1310|consen  139 TTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNP---DEDCPSILVNYNPQLIELKCLTISPSRPYY  215 (758)
T ss_pred             hhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCc---cccccHHHHHhchhhheeeeeeecCCCCce
Confidence            344556789999999999998 6789999999999999986432111   00000011111222245678999984 568


Q ss_pred             EEEecCCCeEEEEEcCCCCceeee----eeeccc---c-------ccccccc-ccccccceeEEEEcCCCcEEEEecCCC
Q psy10662        145 VACGSENNSLYIYYKGLSKHMHAY----RFDTVR---S-------MLERDRN-EDDTNEFVSAVCWRQLSRVLVAANSQG  209 (221)
Q Consensus       145 l~~~~~d~~i~~~d~~~~~~~~~~----~~~~~~---~-------~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg  209 (221)
                      |++|+.|-..++||.+.......-    .+.+..   .       -++.... ....-..++-+.|+|+|.-|+..-...
T Consensus       216 laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gE  295 (758)
T KOG1310|consen  216 LAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGE  295 (758)
T ss_pred             EEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCe
Confidence            999999999999995422111000    000000   0       0000000 000112256788999997665554455


Q ss_pred             eEEEEECCccc
Q psy10662        210 IIKIYVIPIRV  220 (221)
Q Consensus       210 ~i~iw~~~~~~  220 (221)
                      .|+++++..++
T Consensus       296 hVYlfdvn~~~  306 (758)
T KOG1310|consen  296 HVYLFDVNEDK  306 (758)
T ss_pred             EEEEEeecCCC
Confidence            79999987653

>KOG1963|consensus

Probab=99.80  E-value=2.3e-17  Score=126.71  Aligned_cols=190  Identities=16%  Similarity=0.243  Sum_probs=148.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC----CcEEEecCCCcEEEEEcCCCccceeee-----
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK----EDIVSASTDSQLKLWNINKPNCLRSFV-----   72 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~l~s~~~d~~v~~wd~~~~~~~~~~~-----   72 (221)
                      |++.++.. .+..|.||... ++.++..+..|..++..+.+.|.    .++++++.||.|++||...+..++.+.     
T Consensus        27 D~k~l~~~-~~~~V~VyS~~-Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v  104 (792)
T KOG1963|consen   27 DAKFLFLC-TGNFVKVYSTA-TGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPV  104 (792)
T ss_pred             CCcEEEEe-eCCEEEEEecc-hHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCce
Confidence            55555555 56689999998 88999999999999999999852    347799999999999987654433221     


Q ss_pred             --------------------------------------------------------------------------------
Q psy10662         73 --------------------------------------------------------------------------------   72 (221)
Q Consensus        73 --------------------------------------------------------------------------------   72 (221)
                                                                                                      
T Consensus       105 ~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~  184 (792)
T KOG1963|consen  105 HALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCKIH  184 (792)
T ss_pred             eEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeeeEE
Confidence                                                                                            


Q ss_pred             ------------------ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceE
Q psy10662         73 ------------------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKN  134 (221)
Q Consensus        73 ------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  134 (221)
                                        .|.-.+++.+++|+++++|++..||.|.+|.--..+         ........+.-|..+|+
T Consensus       185 ~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~---------~~~~t~t~lHWH~~~V~  255 (792)
T KOG1963|consen  185 IYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSS---------DDSETCTLLHWHHDEVN  255 (792)
T ss_pred             EEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccc---------cccccceEEEecccccc
Confidence                              244457889999999999999999999999532100         01111234678899999


Q ss_pred             EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEE
Q psy10662        135 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIY  214 (221)
Q Consensus       135 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  214 (221)
                      +++|+++|.+|++|+..|.+.+|.+.+++.. .+               ..-.++|..+.++||+.+.+....|+.|.+-
T Consensus       256 ~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kq-fL---------------PRLgs~I~~i~vS~ds~~~sl~~~DNqI~li  319 (792)
T KOG1963|consen  256 SLSFSSDGAYLLSGGREGVLVLWQLETGKKQ-FL---------------PRLGSPILHIVVSPDSDLYSLVLEDNQIHLI  319 (792)
T ss_pred             eeEEecCCceEeecccceEEEEEeecCCCcc-cc---------------cccCCeeEEEEEcCCCCeEEEEecCceEEEE
Confidence            9999999999999999999999999888732 11               1346689999999999999999999999998


Q ss_pred             ECCc
Q psy10662        215 VIPI  218 (221)
Q Consensus       215 ~~~~  218 (221)
                      ...+
T Consensus       320 ~~~d  323 (792)
T KOG1963|consen  320 KASD  323 (792)
T ss_pred             eccc
Confidence            7743

>KOG3881|consensus

Probab=99.80  E-value=2.6e-17  Score=116.07  Aligned_cols=191  Identities=12%  Similarity=0.098  Sum_probs=145.9

Q ss_pred             ceEEEEeCCCeEEEEEecCC---ceeeEEEEeccCceEEEEEec--CCcEEEecCC--CcEEEEEcCCCccceeeecc--
Q psy10662          4 CHLAFGSADHCVHYYDLRNT---KEALAVFKGHRKAVSYVKFLN--KEDIVSASTD--SQLKLWNINKPNCLRSFVGH--   74 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d--~~v~~wd~~~~~~~~~~~~~--   74 (221)
                      ..|++|-.+|.+.+|.....   ..++..+..+ .++..+.-+|  ...+++|+..  ..+++||++..+.+.+-+..  
T Consensus       116 g~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpn  194 (412)
T KOG3881|consen  116 GTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPN  194 (412)
T ss_pred             CEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCC
Confidence            35778889999999998722   1233344433 4566666665  2446678988  88999999887655443221  


Q ss_pred             -------ccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE
Q psy10662         75 -------INDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV  145 (221)
Q Consensus        75 -------~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  145 (221)
                             +-.++.+.|-|.  ...|++++.-+.+++||.+.+..            ++..+.-...+++++...|+++++
T Consensus       195 D~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRR------------PV~~fd~~E~~is~~~l~p~gn~I  262 (412)
T KOG3881|consen  195 DRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRR------------PVAQFDFLENPISSTGLTPSGNFI  262 (412)
T ss_pred             ccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCc------------ceeEeccccCcceeeeecCCCcEE
Confidence                   123577888877  67899999999999999875432            233345567889999999999999


Q ss_pred             EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      ++|...|.+..||++.++.....              +.+..+.|+++..+|.+++|++++-|..+||+|+++++|
T Consensus       263 y~gn~~g~l~~FD~r~~kl~g~~--------------~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkl  324 (412)
T KOG3881|consen  263 YTGNTKGQLAKFDLRGGKLLGCG--------------LKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKL  324 (412)
T ss_pred             EEecccchhheecccCceeeccc--------------cCCccCCcceEEEcCCCceEEeeccceeEEEeecccchh
Confidence            99999999999999988765441              236678899999999999999999999999999999764

>KOG2111|consensus

Probab=99.79  E-value=2.2e-16  Score=108.78  Aligned_cols=178  Identities=15%  Similarity=0.178  Sum_probs=133.7

Q ss_pred             CeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcC-CCccceeeeccc--cceeEEEEeCCCCE
Q psy10662         13 HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNIN-KPNCLRSFVGHI--NDKNFVGLATDGDY   89 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~-~~~~~~~~~~~~--~~v~~~~~~~~~~~   89 (221)
                      +.|.|||=. ..+++.++. ...+|.++.+.++..++.  ..+.|+||... +.+.++.+....  ..+.+++-+.+..+
T Consensus        75 NkviIWDD~-k~~~i~el~-f~~~I~~V~l~r~riVvv--l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~  150 (346)
T KOG2111|consen   75 NKVIIWDDL-KERCIIELS-FNSEIKAVKLRRDRIVVV--LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSL  150 (346)
T ss_pred             ceEEEEecc-cCcEEEEEE-eccceeeEEEcCCeEEEE--ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceE
Confidence            579999954 567777777 678999999987654333  47889999997 566666664332  23333333333334


Q ss_pred             EEE-ecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe-EEEEEcCCCCceee
Q psy10662         90 VAC-GSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS-LYIYYKGLSKHMHA  167 (221)
Q Consensus        90 l~~-~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~~d~~~~~~~~~  167 (221)
                      ||. |-.-|.|.|-|+...+.-           ....+..|.+.|.|++.+.+|.++|+++..|+ |+|||..+++.+++
T Consensus       151 LafPg~k~GqvQi~dL~~~~~~-----------~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E  219 (346)
T KOG2111|consen  151 LAFPGFKTGQVQIVDLASTKPN-----------APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQE  219 (346)
T ss_pred             EEcCCCccceEEEEEhhhcCcC-----------CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeee
Confidence            444 345689999998765441           11235899999999999999999999999997 89999999999888


Q ss_pred             eeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        168 YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +.-.             .....|.+++|||++.+|+++|.-|+++++.+..
T Consensus       220 ~RRG-------------~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  220 LRRG-------------VDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             eecC-------------CchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence            7521             2345699999999999999999999999999875

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.79  E-value=3e-16  Score=118.47  Aligned_cols=190  Identities=19%  Similarity=0.407  Sum_probs=145.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccC-ceEEEEE-ecCCc--EEEecC-CCcEEEEEcCC-Cccceeeeccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK-AVSYVKF-LNKED--IVSAST-DSQLKLWNINK-PNCLRSFVGHI   75 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~i~~~~~-~~~~~--l~s~~~-d~~v~~wd~~~-~~~~~~~~~~~   75 (221)
                      ++..++.++.|+.+.+|+..........+..+.. .+..+.+ .++..  ++..+. |+.+.+|+... ......+..|.
T Consensus        76 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  155 (466)
T COG2319          76 DGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHS  155 (466)
T ss_pred             CCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCc
Confidence            5667888888999999999843325666665443 7777777 65433  444344 99999999988 67777788899


Q ss_pred             cceeEEEEeCCCCEEEEecC-CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EEEEecCCCe
Q psy10662         76 NDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YVACGSENNS  153 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~  153 (221)
                      ..|..++|+|++.++++++. ++.+++|++..++.+..+             .+|...+.+++|+|++. .+++++.|+.
T Consensus       156 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~~~~~~~~d~~  222 (466)
T COG2319         156 ESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTL-------------AGHTDPVSSLAFSPDGGLLIASGSSDGT  222 (466)
T ss_pred             ccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEee-------------ccCCCceEEEEEcCCcceEEEEecCCCc
Confidence            99999999999998888886 999999999886655443             55889999999999998 5555599999


Q ss_pred             EEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        154 LYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      |++||...+.....              .+..|.... ...|+|++.++++++.|+.+++|++...
T Consensus       223 i~~wd~~~~~~~~~--------------~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~  273 (466)
T COG2319         223 IRLWDLSTGKLLRS--------------TLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSS  273 (466)
T ss_pred             EEEEECCCCcEEee--------------ecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCC
Confidence            99998775444331              122454443 3389999989999999999999999754

>KOG1587|consensus

Probab=99.79  E-value=1.3e-17  Score=126.84  Aligned_cols=191  Identities=16%  Similarity=0.178  Sum_probs=131.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCcee-eE----EEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCccc-----
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEA-LA----VFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPNCL-----   68 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~-~~----~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~~~-----   68 (221)
                      +.+++|.|..+|.|.+||+...... ..    ....|..+++.+.|..   +..+++++.||.|..|+++.-...     
T Consensus       254 ~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~  333 (555)
T KOG1587|consen  254 DPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLL  333 (555)
T ss_pred             CcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcc
Confidence            6789999999999999999844332 11    2345889999999973   344999999999999997532110     


Q ss_pred             ----------------------------------------------------------eeeeccccceeEEEEeCCCCEE
Q psy10662         69 ----------------------------------------------------------RSFVGHINDKNFVGLATDGDYV   90 (221)
Q Consensus        69 ----------------------------------------------------------~~~~~~~~~v~~~~~~~~~~~l   90 (221)
                                                                                ..+..|.++|+++.++|=+..+
T Consensus       334 ~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~  413 (555)
T KOG1587|consen  334 LESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKN  413 (555)
T ss_pred             cccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccce
Confidence                                                                      0011344566666666655544


Q ss_pred             EEecCCCeEEEEECC-CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC-CEEEEecCCCeEEEEEcCCCCceeee
Q psy10662         91 ACGSENNSLYIYYKG-LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAY  168 (221)
Q Consensus        91 ~~~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~  168 (221)
                      +..+.|-+|+||... ...++             ..+..+...+++++|||.. ..++++..||.+.+||+.........
T Consensus       414 fls~gDW~vriWs~~~~~~Pl-------------~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~  480 (555)
T KOG1587|consen  414 FLSVGDWTVRIWSEDVIASPL-------------LSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVL  480 (555)
T ss_pred             eeeeccceeEeccccCCCCcc-------------hhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcc
Confidence            443346667777654 33332             2335566679999999954 57888889999999998754432111


Q ss_pred             eeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        169 RFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                                   ...-+....+.+.|+++|+.|++|...|.+++|++..
T Consensus       481 -------------s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  481 -------------SQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             -------------cccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence                         1112244567788899999999999999999999953

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.77  E-value=1.2e-16  Score=107.86  Aligned_cols=137  Identities=15%  Similarity=0.245  Sum_probs=99.2

Q ss_pred             CeEEEEEecCCceeeEEEEe-ccCceEEEEEecCC-cEE--EecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCC
Q psy10662         13 HCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKE-DIV--SASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD   88 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~--s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~   88 (221)
                      |...+|.++........+.- ..++|.+++|+|++ .++  .|..+..|.+||++ ++.+..+  +...++.+.|+|+|+
T Consensus        37 ~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~--~~~~~n~i~wsP~G~  113 (194)
T PF08662_consen   37 GEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSF--GTQPRNTISWSPDGR  113 (194)
T ss_pred             eeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEee--cCCCceEEEECCCCC
Confidence            45667777544445555543 34579999999854 443  34567899999996 6666665  356778999999999


Q ss_pred             EEEEecC---CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC------CCeEEEEEc
Q psy10662         89 YVACGSE---NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE------NNSLYIYYK  159 (221)
Q Consensus        89 ~l~~~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~  159 (221)
                      ++++++.   .|.|.+||.++.+.+...              . ...++.++|+|+|++++++..      |..++||+.
T Consensus       114 ~l~~~g~~n~~G~l~~wd~~~~~~i~~~--------------~-~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~  178 (194)
T PF08662_consen  114 FLVLAGFGNLNGDLEFWDVRKKKKISTF--------------E-HSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF  178 (194)
T ss_pred             EEEEEEccCCCcEEEEEECCCCEEeecc--------------c-cCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe
Confidence            9998864   467999999988777553              2 234688999999999998874      688899987


Q ss_pred             CCCCceeee
Q psy10662        160 GLSKHMHAY  168 (221)
Q Consensus       160 ~~~~~~~~~  168 (221)
                      . ++.+...
T Consensus       179 ~-G~~l~~~  186 (194)
T PF08662_consen  179 Q-GRLLYKK  186 (194)
T ss_pred             c-CeEeEec
Confidence            4 4444433

>KOG0642|consensus

Probab=99.77  E-value=8.8e-18  Score=123.36  Aligned_cols=190  Identities=14%  Similarity=0.202  Sum_probs=139.6

Q ss_pred             EEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCC--------CccceeeeccccceeEEEEeCCCCEEEEecCCCeE
Q psy10662         29 VFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINK--------PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSL   99 (221)
Q Consensus        29 ~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v   99 (221)
                      ++..|.+.|+.++|+| ...|++++.||++++|+++.        -+++.++.+|.++|.|+++.+++..+++|+.||+|
T Consensus       289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I  368 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI  368 (577)
T ss_pred             eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence            5667889999999997 67799999999999999943        25677889999999999999999999999999999


Q ss_pred             EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCc-----------eeee
Q psy10662        100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH-----------MHAY  168 (221)
Q Consensus       100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-----------~~~~  168 (221)
                      +.|++....-....   .........+.||...++.+++++....|++++.||++++|+......           ...+
T Consensus       369 ~~w~~p~n~dp~ds---~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsv  445 (577)
T KOG0642|consen  369 RCWNLPPNQDPDDS---YDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSV  445 (577)
T ss_pred             eeeccCCCCCcccc---cCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcceE
Confidence            99976522111000   011233456789999999999999999999999999999998765443           0011


Q ss_pred             eeecccc------------------cccccccc-------cccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        169 RFDTVRS------------------MLERDRNE-------DDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       169 ~~~~~~~------------------~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      ++...+.                  ....+..+       ......++.+.++|.+.+.+++-.|+.|+++|..++++
T Consensus       446 d~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~  523 (577)
T KOG0642|consen  446 DRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKI  523 (577)
T ss_pred             eeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccccccc
Confidence            1111000                  00000000       01123477888999999999999999999999988763

>KOG1517|consensus

Probab=99.76  E-value=7.4e-17  Score=126.63  Aligned_cols=195  Identities=14%  Similarity=0.180  Sum_probs=139.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEE-EeccCceEEEEEe-c-CCcEEEecCCCcEEEEEcCCCc---cceeeecccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVF-KGHRKAVSYVKFL-N-KEDIVSASTDSQLKLWNINKPN---CLRSFVGHIN   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~-~~~~~~i~~~~~~-~-~~~l~s~~~d~~v~~wd~~~~~---~~~~~~~~~~   76 (221)
                      |.++++| .-..|+|||.. ....++.+ .+....|+++.-+ + ++.+++|..||.|++||.+...   .+...+.|..
T Consensus      1178 G~Ll~tG-d~r~IRIWDa~-~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~ 1255 (1387)
T KOG1517|consen 1178 GHLLVTG-DVRSIRIWDAH-KEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHND 1255 (1387)
T ss_pred             CeEEecC-CeeEEEEEecc-cceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCC
Confidence            4444444 57899999998 44444433 3445567887765 3 5779999999999999998753   3556677877


Q ss_pred             c--eeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEe---eCceEEEEEecCCCEEEEecC
Q psy10662         77 D--KNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH---INDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        77 ~--v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      .  |..+.+.++|- .+++|+.+|.|.+||++.......+           ....|   .+..+++..++....+|+|+.
T Consensus      1256 ~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~-----------~iv~~~~yGs~lTal~VH~hapiiAsGs~ 1324 (1387)
T KOG1517|consen 1256 VEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFL-----------TIVAHWEYGSALTALTVHEHAPIIASGSA 1324 (1387)
T ss_pred             cccceeEEeecCCCcceeeeccCCeEEEEecccCcccccc-----------eeeeccccCccceeeeeccCCCeeeecCc
Confidence            6  99999998775 4999999999999999975222111           11111   225899999999999999998


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                       +.|+||++.... +..++..+ +.       .......+.+++|+|..-+|++|+.|..|.+|..+.+.
T Consensus      1325 -q~ikIy~~~G~~-l~~~k~n~-~F-------~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1325 -QLIKIYSLSGEQ-LNIIKYNP-GF-------MGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred             -ceEEEEecChhh-hcccccCc-cc-------ccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence             999999975433 22222111 00       01123456899999999999999999999999987654

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.76  E-value=9.7e-16  Score=112.72  Aligned_cols=197  Identities=12%  Similarity=0.168  Sum_probs=124.2

Q ss_pred             CCCceEEEEeC-CCeEEEEEecCCce---eeEEEEeccCceEEEEEecCC-cE-EEecCCCcEEEEEcCCCcccee----
Q psy10662          1 MNSCHLAFGSA-DHCVHYYDLRNTKE---ALAVFKGHRKAVSYVKFLNKE-DI-VSASTDSQLKLWNINKPNCLRS----   70 (221)
Q Consensus         1 ~~~~~l~~~~~-dg~i~i~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~-~l-~s~~~d~~v~~wd~~~~~~~~~----   70 (221)
                      |++++|++++. ++.|.+|++++.+.   .+..+. +.....+++++|++ ++ ++...++.|.+||+.+...+..    
T Consensus        89 ~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~  167 (330)
T PRK11028         89 HQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPA  167 (330)
T ss_pred             CCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCC
Confidence            57887777764 88999999974332   222232 33456778899854 45 4555679999999976332211    


Q ss_pred             -ee-ccccceeEEEEeCCCCEEEEecC-CCeEEEEECCC--Ce--eeEEEEeecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662         71 -FV-GHINDKNFVGLATDGDYVACGSE-NNSLYIYYKGL--SK--HMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD  143 (221)
Q Consensus        71 -~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  143 (221)
                       .. ........++|+|++++++++.. ++.|.+||+..  ++  .+..+.  ...    ... .+......+.++|+++
T Consensus       168 ~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~--~~p----~~~-~~~~~~~~i~~~pdg~  240 (330)
T PRK11028        168 EVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLD--MMP----ADF-SDTRWAADIHITPDGR  240 (330)
T ss_pred             ceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEe--cCC----CcC-CCCccceeEEECCCCC
Confidence             11 11234578999999999877765 89999999873  22  122210  000    000 0111234688999999


Q ss_pred             EEEEecC-CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEECC
Q psy10662        144 YVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVIP  217 (221)
Q Consensus       144 ~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~  217 (221)
                      +++++.. ++.|.+|++........+.-.           . .-......+.|+|+|++|++++. ++.|.+|+++
T Consensus       241 ~lyv~~~~~~~I~v~~i~~~~~~~~~~~~-----------~-~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        241 HLYACDRTASLISVFSVSEDGSVLSFEGH-----------Q-PTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             EEEEecCCCCeEEEEEEeCCCCeEEEeEE-----------E-eccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence            9998864 689999998654322111100           0 00123456899999999998775 8999999874

>KOG0322|consensus

Probab=99.76  E-value=9.5e-18  Score=112.77  Aligned_cols=142  Identities=15%  Similarity=0.208  Sum_probs=114.3

Q ss_pred             eEEEEeCCCeEEEEEecCCc---------eeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC--c--ccee
Q psy10662          5 HLAFGSADHCVHYYDLRNTK---------EALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP--N--CLRS   70 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~---------~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~--~--~~~~   70 (221)
                      +|++|..+|.+.+||+....         +.......|+.+|.++.|.+ -..=++++.+..+.+|.+...  .  ....
T Consensus       167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e  246 (323)
T KOG0322|consen  167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKE  246 (323)
T ss_pred             EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccce
Confidence            67889999999999998321         22333456899999999985 344578888889999988643  1  1122


Q ss_pred             eeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         71 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        71 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      +.-....|..+.+-||++.+|+++.|+.|+||..++..++..+             ..|...|++++|+|+..++|+++.
T Consensus       247 ~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVL-------------kyHsagvn~vAfspd~~lmAaask  313 (323)
T KOG0322|consen  247 ITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVL-------------KYHSAGVNAVAFSPDCELMAAASK  313 (323)
T ss_pred             EEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhh-------------hhhhcceeEEEeCCCCchhhhccC
Confidence            2223446889999999999999999999999999988887664             778899999999999999999999


Q ss_pred             CCeEEEEEc
Q psy10662        151 NNSLYIYYK  159 (221)
Q Consensus       151 d~~i~~~d~  159 (221)
                      |++|.+|++
T Consensus       314 D~rISLWkL  322 (323)
T KOG0322|consen  314 DARISLWKL  322 (323)
T ss_pred             CceEEeeec
Confidence            999999985

>KOG4227|consensus

Probab=99.75  E-value=1.3e-16  Score=113.15  Aligned_cols=214  Identities=13%  Similarity=0.108  Sum_probs=146.7

Q ss_pred             CCceEEEEeCCCeEEEEEecC-----CceeeEEEE-eccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeec-
Q psy10662          2 NSCHLAFGSADHCVHYYDLRN-----TKEALAVFK-GHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVG-   73 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~-----~~~~~~~~~-~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~-   73 (221)
                      +++.|++|+.|..+++|+++.     ..+++.... .|.+.|.|++|.. +..+++|..+++|...|+++.+.+..+.. 
T Consensus        67 N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~  146 (609)
T KOG4227|consen   67 NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANEN  146 (609)
T ss_pred             CCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeeccc
Confidence            578999999999999999872     224555443 3568999999986 55689999999999999999888776632 


Q ss_pred             -cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCe-eeEEE------------E-------------------------
Q psy10662         74 -HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK-HMHAY------------R-------------------------  114 (221)
Q Consensus        74 -~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~------------~-------------------------  114 (221)
                       ..+.|+.+..+|..+.+++.+.++.|.+||.+..+ ++..+            .                         
T Consensus       147 ~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~  226 (609)
T KOG4227|consen  147 NNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRM  226 (609)
T ss_pred             CcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeecc
Confidence             23489999999999999999999999999987654 21111            1                         


Q ss_pred             -------------------------eecccce--------eEeeEE-----------Ee-------eCceEEEEEecCCC
Q psy10662        115 -------------------------FDTVRSM--------LESSFV-----------GH-------INDKNFVGLATDGD  143 (221)
Q Consensus       115 -------------------------~~~~~~~--------~~~~~~-----------~~-------~~~v~~~~~~~~~~  143 (221)
                                               |.+...+        +..-+.           .|       ...+.+++|.-+. 
T Consensus       227 ~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~-  305 (609)
T KOG4227|consen  227 QARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDY-  305 (609)
T ss_pred             ccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecce-
Confidence                                     1000000        000000           01       1123455555443 


Q ss_pred             EEEEecCCCeEEEEEcCCCCceeeee-eecc-c------ccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        144 YVACGSENNSLYIYYKGLSKHMHAYR-FDTV-R------SMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       144 ~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~-~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      .+++|+.+-.|++|.+.......-+. .... .      -....+..+.+|..-++.+.|+|...+|++.+....+++|.
T Consensus       306 ~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS  385 (609)
T KOG4227|consen  306 TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWS  385 (609)
T ss_pred             eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheeccc
Confidence            48999999999999876433222111 0000 0      01122344678999999999999999999999999999996


Q ss_pred             C
Q psy10662        216 I  216 (221)
Q Consensus       216 ~  216 (221)
                      -
T Consensus       386 ~  386 (609)
T KOG4227|consen  386 D  386 (609)
T ss_pred             c
Confidence            4

>KOG1963|consensus

Probab=99.75  E-value=5.4e-16  Score=119.34  Aligned_cols=103  Identities=17%  Similarity=0.190  Sum_probs=86.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecC---CceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN---TKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~---~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      |+++++|+|..||.|.+|.--.   .......++-|.+.|.+++|++ +.+|++|+..+.+.+|.+.+++ .+.++...+
T Consensus       215 pn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs  293 (792)
T KOG1963|consen  215 PNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGS  293 (792)
T ss_pred             cccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCC
Confidence            6889999999999999997432   2234567888999999999996 6779999999999999999988 444566778


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEEC
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYK  104 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~  104 (221)
                      +|..+.++||+++.+....|+.|.+...
T Consensus       294 ~I~~i~vS~ds~~~sl~~~DNqI~li~~  321 (792)
T KOG1963|consen  294 PILHIVVSPDSDLYSLVLEDNQIHLIKA  321 (792)
T ss_pred             eeEEEEEcCCCCeEEEEecCceEEEEec
Confidence            8999999999988888888888877754

>KOG0771|consensus

Probab=99.75  E-value=2.9e-17  Score=116.72  Aligned_cols=159  Identities=13%  Similarity=0.147  Sum_probs=117.1

Q ss_pred             EEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEee
Q psy10662         38 SYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD  116 (221)
Q Consensus        38 ~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  116 (221)
                      .+++|+. +..+++++.||++|+|+..+...+.....|...|.++.|+|||++|++-+.| ..+||+.+++..+....  
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t--  224 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT--  224 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC--
Confidence            6788886 5779999999999999988877777778899999999999999999999999 89999999986654431  


Q ss_pred             cccceeEeeEEEeeCceEEEEEecCC-----CEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccccee
Q psy10662        117 TVRSMLESSFVGHINDKNFVGLATDG-----DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVS  191 (221)
Q Consensus       117 ~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  191 (221)
                               -...+.....+.|+.++     ..++.-...+.|+.||+...+.-..+          +..........|+
T Consensus       225 ---------~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l----------~~~~~~~~~~siS  285 (398)
T KOG0771|consen  225 ---------PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFL----------RLRKKIKRFKSIS  285 (398)
T ss_pred             ---------CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecccccc----------chhhhhhccCcce
Confidence                     12233445567787766     33334444567888776433221000          0111112234689


Q ss_pred             EEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        192 AVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +++.+++|++++.|+.||.|.+++..+
T Consensus       286 sl~VS~dGkf~AlGT~dGsVai~~~~~  312 (398)
T KOG0771|consen  286 SLAVSDDGKFLALGTMDGSVAIYDAKS  312 (398)
T ss_pred             eEEEcCCCcEEEEeccCCcEEEEEece
Confidence            999999999999999999999999864

>KOG0649|consensus

Probab=99.75  E-value=1.5e-15  Score=101.37  Aligned_cols=139  Identities=17%  Similarity=0.269  Sum_probs=108.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeeccc----
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHI----   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~----   75 (221)
                      |..+-++.++.|+.++-||++ +++..+++++|.+.|.++.-- ..+.+++|++||++++||.++++.+..+...+    
T Consensus       124 P~enSi~~AgGD~~~y~~dlE-~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~  202 (325)
T KOG0649|consen  124 PSENSILFAGGDGVIYQVDLE-DGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNL  202 (325)
T ss_pred             cCCCcEEEecCCeEEEEEEec-CCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhh
Confidence            455666777799999999999 899999999999999999874 57889999999999999999999887764221    


Q ss_pred             ------cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662         76 ------NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        76 ------~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                            ..|-+++.  +...+++|+.- .+.+|.+++.++...+              .-...+..+.|..+  .+++++
T Consensus       203 lRp~~g~wigala~--~edWlvCGgGp-~lslwhLrsse~t~vf--------------pipa~v~~v~F~~d--~vl~~G  263 (325)
T KOG0649|consen  203 LRPDWGKWIGALAV--NEDWLVCGGGP-KLSLWHLRSSESTCVF--------------PIPARVHLVDFVDD--CVLIGG  263 (325)
T ss_pred             cCcccCceeEEEec--cCceEEecCCC-ceeEEeccCCCceEEE--------------ecccceeEeeeecc--eEEEec
Confidence                  23445554  45577777554 5999999998887665              23455666777654  788888


Q ss_pred             CCCeEEEEEc
Q psy10662        150 ENNSLYIYYK  159 (221)
Q Consensus       150 ~d~~i~~~d~  159 (221)
                      +.+.+.-|.+
T Consensus       264 ~g~~v~~~~l  273 (325)
T KOG0649|consen  264 EGNHVQSYTL  273 (325)
T ss_pred             cccceeeeee
Confidence            8888888865

>KOG1310|consensus

Probab=99.75  E-value=7.4e-18  Score=123.88  Aligned_cols=183  Identities=16%  Similarity=0.146  Sum_probs=135.5

Q ss_pred             eeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceee-eccccceeEEEEeCC--CCEEEEecCCCeEEE
Q psy10662         26 ALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSF-VGHINDKNFVGLATD--GDYVACGSENNSLYI  101 (221)
Q Consensus        26 ~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i  101 (221)
                      ..+.+.+|.+.|.+++|+. +..|++|+.|-.+.|||.-..+.+..+ .+|...|.++.|-|.  ...+++|..|..|++
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l  121 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL  121 (758)
T ss_pred             hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence            3457889999999999995 667999999999999999888888777 689999999999884  457899999999999


Q ss_pred             EECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC-CEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccc
Q psy10662        102 YYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERD  180 (221)
Q Consensus       102 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~  180 (221)
                      +|+...+.-..   +.........+..|...|..++-.|++ ..+.++++||+|+-+|++....-     .+.......+
T Consensus       122 fdl~~~~~~~~---d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c-----~p~~~~~~~l  193 (758)
T KOG1310|consen  122 FDLDSSKEGGM---DHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVC-----NPDEDCPSIL  193 (758)
T ss_pred             Eeccccccccc---ccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccC-----CccccccHHH
Confidence            99975432211   222223334456788889999999988 78999999999999999864321     1111111111


Q ss_pred             ccccccccceeEEEEcCC-CcEEEEecCCCeEEEEEC
Q psy10662        181 RNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       181 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~  216 (221)
                      ......--...++..+|. ..+|+.|+.|-..++||.
T Consensus       194 ~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~  230 (758)
T KOG1310|consen  194 VNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDR  230 (758)
T ss_pred             HHhchhhheeeeeeecCCCCceEEecCCCchhhhhhh
Confidence            111122234678899995 568899999999999994

>KOG1272|consensus

Probab=99.74  E-value=7e-18  Score=121.46  Aligned_cols=177  Identities=17%  Similarity=0.211  Sum_probs=142.6

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG   82 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~   82 (221)
                      +++|++ ....++|||-.  +..++.++.| ..|..+.|.|-.+ |++++..|.++--|+.+|+.+..+..-.+.+..+.
T Consensus       183 q~~AVA-QK~y~yvYD~~--GtElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~  258 (545)
T KOG1272|consen  183 QFFAVA-QKKYVYVYDNN--GTELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMK  258 (545)
T ss_pred             HHHHhh-hhceEEEecCC--CcEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhh
Confidence            455555 66789999954  7777888754 5799999999766 67888899999999999999999987888899999


Q ss_pred             EeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC
Q psy10662         83 LATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS  162 (221)
Q Consensus        83 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~  162 (221)
                      -+|-...+-+|..+|+|.+|...+.+++..             +..|.++|.++++.++|++++|.+.|..++|||++..
T Consensus       259 qNP~NaVih~GhsnGtVSlWSP~skePLvK-------------iLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~  325 (545)
T KOG1272|consen  259 QNPYNAVIHLGHSNGTVSLWSPNSKEPLVK-------------ILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNF  325 (545)
T ss_pred             cCCccceEEEcCCCceEEecCCCCcchHHH-------------HHhcCCCcceEEECCCCcEEeecccccceeEeeeccc
Confidence            999988999999999999998877766544             4789999999999999999999999999999999987


Q ss_pred             CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        163 KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      ..+.++..                ..+...+++|..| +||. +....+.+|.
T Consensus       326 ~ql~t~~t----------------p~~a~~ls~Sqkg-lLA~-~~G~~v~iw~  360 (545)
T KOG1272|consen  326 YQLHTYRT----------------PHPASNLSLSQKG-LLAL-SYGDHVQIWK  360 (545)
T ss_pred             cccceeec----------------CCCcccccccccc-ceee-ecCCeeeeeh
Confidence            76655531                2345677887655 3444 3444688884

>KOG1240|consensus

Probab=99.73  E-value=2.4e-15  Score=119.79  Aligned_cols=207  Identities=10%  Similarity=0.067  Sum_probs=141.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCC------ceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC--cc----
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNT------KEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP--NC----   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~------~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~--~~----   67 (221)
                      +++.++++|+.||+|++|+..+-      .+...++.-..+.+.++...+ +..++.++.||.|++.++...  +.    
T Consensus      1059 ~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~ 1138 (1431)
T KOG1240|consen 1059 EHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVAT 1138 (1431)
T ss_pred             CCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceee
Confidence            35689999999999999998631      122233443567888888885 567999999999999987541  00    


Q ss_pred             -c---------------------ee---------------------------eeccccceeEEEEeCCCCEEEEecCCCe
Q psy10662         68 -L---------------------RS---------------------------FVGHINDKNFVGLATDGDYVACGSENNS   98 (221)
Q Consensus        68 -~---------------------~~---------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~   98 (221)
                       .                     ++                           .....+.|++++.+|.+..+++|+..|.
T Consensus      1139 ~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~ 1218 (1431)
T KOG1240|consen 1139 QVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQ 1218 (1431)
T ss_pred             eeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCce
Confidence             0                     00                           0012356899999999999999999999


Q ss_pred             EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec---CCCEEEEec--CCCeEEEEEcCCCCceeeeeeecc
Q psy10662         99 LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT---DGDYVACGS--ENNSLYIYYKGLSKHMHAYRFDTV  173 (221)
Q Consensus        99 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~  173 (221)
                      +.+||++=+.++..+.            .++..++..+..+|   .....++++  ..+.|.+|++.++.....+-....
T Consensus      1219 l~lWDLRF~~~i~sw~------------~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~ 1286 (1431)
T KOG1240|consen 1219 LVLWDLRFRVPILSWE------------HPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDG 1286 (1431)
T ss_pred             EEEEEeecCceeeccc------------CcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCC
Confidence            9999999888877652            23345666666665   334444444  467899999999977666644322


Q ss_pred             cccccccccc----cccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        174 RSMLERDRNE----DDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       174 ~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ...+......    ..+.......++...+..+.+|+.|..|+.||....
T Consensus      1287 ~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p 1336 (1431)
T KOG1240|consen 1287 APILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRP 1336 (1431)
T ss_pred             CcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCc
Confidence            2222211111    133334455666667788999999999999998754

>KOG1517|consensus

Probab=99.73  E-value=7.7e-16  Score=121.09  Aligned_cols=198  Identities=13%  Similarity=0.213  Sum_probs=136.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc----eeeEEEEecc-------CceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccce
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK----EALAVFKGHR-------KAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLR   69 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~-------~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~   69 (221)
                      |..++++|+.||.|+||+-....    +.+..+.+-.       +.=.-+.|. ..++|++++.-..|+|||......+.
T Consensus      1122 D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~ 1201 (1387)
T KOG1517|consen 1122 DDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVA 1201 (1387)
T ss_pred             chhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEe
Confidence            45689999999999999754332    3333332211       111233454 36778888889999999998887777


Q ss_pred             eee-ccccceeEEEEe-CCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc--eEEEEEecCCCE-
Q psy10662         70 SFV-GHINDKNFVGLA-TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND--KNFVGLATDGDY-  144 (221)
Q Consensus        70 ~~~-~~~~~v~~~~~~-~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~-  144 (221)
                      .+. +....++++.-+ +.|+.+++|..||.|++||.+....-          ..+.....|...  |..+.+.+.|-- 
T Consensus      1202 diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~d----------s~v~~~R~h~~~~~Iv~~slq~~G~~e 1271 (1387)
T KOG1517|consen 1202 DIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPD----------SLVCVYREHNDVEPIVHLSLQRQGLGE 1271 (1387)
T ss_pred             ecccCCCccceeecccccCCceEEEeecCCceEEeecccCCcc----------ccceeecccCCcccceeEEeecCCCcc
Confidence            663 233456665443 34689999999999999998865431          223345666666  888999887654 


Q ss_pred             EEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        145 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       145 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |++|+.+|.|++||++.......+...          ......+..+++..+++...+|+|+. +.|+||++...+
T Consensus      1272 lvSgs~~G~I~~~DlR~~~~e~~~~iv----------~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~ 1336 (1387)
T KOG1517|consen 1272 LVSGSQDGDIQLLDLRMSSKETFLTIV----------AHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQ 1336 (1387)
T ss_pred             eeeeccCCeEEEEecccCcccccceee----------eccccCccceeeeeccCCCeeeecCc-ceEEEEecChhh
Confidence            999999999999999875322211111          00011235889999999999999998 999999997654

>KOG1587|consensus

Probab=99.73  E-value=5.2e-16  Score=118.18  Aligned_cols=190  Identities=15%  Similarity=0.214  Sum_probs=132.7

Q ss_pred             CeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCcc--cee----eeccccceeEEEEe
Q psy10662         13 HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNC--LRS----FVGHINDKNFVGLA   84 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~--~~~----~~~~~~~v~~~~~~   84 (221)
                      +.+.+|++.+...+...+. -..+|++++|+|  ...++.|+.+|.|.+||++.+..  ...    ...|..++..+.|.
T Consensus       222 ~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~  300 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL  300 (555)
T ss_pred             ceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence            4799999996656666666 578999999997  45688899999999999987655  222    24578899999996


Q ss_pred             CCC--CEEEEecCCCeEEEEECCCCeeeEE----------------------EEeec----------ccc----------
Q psy10662         85 TDG--DYVACGSENNSLYIYYKGLSKHMHA----------------------YRFDT----------VRS----------  120 (221)
Q Consensus        85 ~~~--~~l~~~~~d~~v~iwd~~~~~~~~~----------------------~~~~~----------~~~----------  120 (221)
                      .+-  .-+++++.||.|..|+++.-.....                      +.|..          ..+          
T Consensus       301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~  380 (555)
T KOG1587|consen  301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY  380 (555)
T ss_pred             ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence            544  3499999999999998754322110                      00100          000          


Q ss_pred             --------eeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC-CCCceeeeeeeccccccccccccccccccee
Q psy10662        121 --------MLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG-LSKHMHAYRFDTVRSMLERDRNEDDTNEFVS  191 (221)
Q Consensus       121 --------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  191 (221)
                              .....+..|.++|+++.++|=+..++..+.|..+++|... ...++..+               ..+...|.
T Consensus       381 ~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~---------------~~~~~~v~  445 (555)
T KOG1587|consen  381 TPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSL---------------DSSPDYVT  445 (555)
T ss_pred             cccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhh---------------hhccceee
Confidence                    1122344677889999999955544433349999999865 34433333               24556699


Q ss_pred             EEEEcCCC-cEEEEecCCCeEEEEECCc
Q psy10662        192 AVCWRQLS-RVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       192 ~~~~~~~~-~~l~~~~~dg~i~iw~~~~  218 (221)
                      +++|||.. ..++++..||.|.+||+..
T Consensus       446 ~vaWSptrpavF~~~d~~G~l~iWDLl~  473 (555)
T KOG1587|consen  446 DVAWSPTRPAVFATVDGDGNLDIWDLLQ  473 (555)
T ss_pred             eeEEcCcCceEEEEEcCCCceehhhhhc
Confidence            99999965 5677788899999999964

>KOG2394|consensus

Probab=99.72  E-value=8.1e-16  Score=112.87  Aligned_cols=159  Identities=14%  Similarity=0.198  Sum_probs=112.1

Q ss_pred             EEEecCCCcEEEEEcCCCccceeee----ccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCC--------------e
Q psy10662         48 IVSASTDSQLKLWNINKPNCLRSFV----GHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLS--------------K  108 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~~~~----~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~--------------~  108 (221)
                      ++.+-.-|.+.+.|....+..+.+.    -.+..|+|+.|-|.++ .++.+-.+|.+.+||..-.              .
T Consensus       188 llIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~  267 (636)
T KOG2394|consen  188 LLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGD  267 (636)
T ss_pred             eEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCC
Confidence            8888888999998876633222121    1246799999998765 4566677899999975211              1


Q ss_pred             eeEEEEee-cccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662        109 HMHAYRFD-TVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN  187 (221)
Q Consensus       109 ~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (221)
                      ......+. .....++..+.-....|..++|+|||++||+.+.||.++|||..+.+.+..++               ..-
T Consensus       268 ~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mk---------------SYF  332 (636)
T KOG2394|consen  268 QFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMK---------------SYF  332 (636)
T ss_pred             eeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHH---------------hhc
Confidence            11111010 11112333444455688899999999999999999999999987766543332               334


Q ss_pred             cceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        188 EFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       188 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      +...+++|||||+||++|++|.-|.||.+..++|
T Consensus       333 GGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRV  366 (636)
T KOG2394|consen  333 GGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRV  366 (636)
T ss_pred             cceEEEEEcCCccEEEecCCcceEEEEEeccceE
Confidence            5689999999999999999999999999987764

>KOG2111|consensus

Probab=99.72  E-value=1.6e-14  Score=99.71  Aligned_cols=200  Identities=13%  Similarity=0.174  Sum_probs=132.1

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEecc--CceEEEEEecCCcEEE--ecCCCcEEEEEcCCCcc--ceeeecccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHR--KAVSYVKFLNKEDIVS--ASTDSQLKLWNINKPNC--LRSFVGHIN   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~l~s--~~~d~~v~~wd~~~~~~--~~~~~~~~~   76 (221)
                      ..+|++. ..+.|+||...+.-+.++.+....  ....+++-..+..+++  |-.-|.|.+-|+...+.  ...+..|.+
T Consensus       104 r~riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s  182 (346)
T KOG2111|consen  104 RDRIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDS  182 (346)
T ss_pred             CCeEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccC
Confidence            3455555 567899999875556666655322  2233332222333333  34469999999976655  366789999


Q ss_pred             ceeEEEEeCCCCEEEEecCCCe-EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNS-LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      .|.|++++-+|.++|++|..|+ |+|||..+++.+.+++           --.....+.+++|+|++.+|+++++.|++.
T Consensus       183 ~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~R-----------RG~d~A~iy~iaFSp~~s~LavsSdKgTlH  251 (346)
T KOG2111|consen  183 DIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELR-----------RGVDRADIYCIAFSPNSSWLAVSSDKGTLH  251 (346)
T ss_pred             ceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeee-----------cCCchheEEEEEeCCCccEEEEEcCCCeEE
Confidence            9999999999999999999997 7899999999988762           112345799999999999999999999999


Q ss_pred             EEEcCCCCceee----eeeeccccccccc-------ccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        156 IYYKGLSKHMHA----YRFDTVRSMLERD-------RNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       156 ~~d~~~~~~~~~----~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      +|.++.......    +.+.  +..+.+.       ..+.-..+...-++|..+.+.++..+.||.-+-+.+
T Consensus       252 iF~l~~~~~~~~~~SSl~~~--~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~~f  321 (346)
T KOG2111|consen  252 IFSLRDTENTEDESSSLSFK--RLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKFKF  321 (346)
T ss_pred             EEEeecCCCCcccccccccc--ccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEEEe
Confidence            999876442211    1000  0011100       011112334556777777566666667886654443

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=9.9e-16  Score=116.16  Aligned_cols=180  Identities=14%  Similarity=0.118  Sum_probs=116.9

Q ss_pred             CCCceEEEEeCC---CeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEe-cCCCcEEEE--EcCCCccceeeec
Q psy10662          1 MNSCHLAFGSAD---HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSA-STDSQLKLW--NINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~-~~d~~v~~w--d~~~~~~~~~~~~   73 (221)
                      |||+.|+..+.+   ..|++||+. +++.. .+....+....++|+|++. |+.+ +.+|.+.+|  |+.+++. ..+..
T Consensus       213 PDG~~la~~s~~~~~~~i~i~dl~-tg~~~-~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~  289 (429)
T PRK01742        213 PDGSKLAYVSFENKKSQLVVHDLR-SGARK-VVASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTS  289 (429)
T ss_pred             CCCCEEEEEEecCCCcEEEEEeCC-CCceE-EEecCCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-Eeecc
Confidence            789999987654   369999997 44321 1222233345789998654 6554 467876555  6555543 44555


Q ss_pred             cccceeEEEEeCCCCEEEEe-cCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         74 HINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      +...+....|+|+|+.++.+ ..++...||++.........            + .+..  ....|+|+|+.|+..+.++
T Consensus       290 ~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~------------l-~~~~--~~~~~SpDG~~ia~~~~~~  354 (429)
T PRK01742        290 GAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASL------------V-GGRG--YSAQISADGKTLVMINGDN  354 (429)
T ss_pred             CCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEE------------e-cCCC--CCccCCCCCCEEEEEcCCC
Confidence            66678899999999976654 45778888876432211111            1 1222  3578999999998887765


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                       +.+||+.+++......               ..  ....+.|+|+|++|+.++.++.+.+|++
T Consensus       355 -i~~~Dl~~g~~~~lt~---------------~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~  400 (429)
T PRK01742        355 -VVKQDLTSGSTEVLSS---------------TF--LDESPSISPNGIMIIYSSTQGLGKVLQL  400 (429)
T ss_pred             -EEEEECCCCCeEEecC---------------CC--CCCCceECCCCCEEEEEEcCCCceEEEE
Confidence             5558987765421110               00  1235789999999999998888887775

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.71  E-value=1.1e-14  Score=107.20  Aligned_cols=192  Identities=7%  Similarity=0.056  Sum_probs=122.9

Q ss_pred             eEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecCCc-EEEe-cCCCcEEEEEcCC-Ccc--ceeeeccccc
Q psy10662          5 HLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKED-IVSA-STDSQLKLWNINK-PNC--LRSFVGHIND   77 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~-l~s~-~~d~~v~~wd~~~-~~~--~~~~~~~~~~   77 (221)
                      .+++...++.|++|++...++  .+..+. +.+....++++|++. |+++ ..++.|.+|++.. ++.  +.... ....
T Consensus         4 ~y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~   81 (330)
T PRK11028          4 VYIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGS   81 (330)
T ss_pred             EEEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCC
Confidence            344557789999999963333  445554 446678899998654 5444 5688999999963 322  22221 2334


Q ss_pred             eeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEE
Q psy10662         78 KNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLY  155 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~  155 (221)
                      ...++|+|+++++++++ .++.|.+|++.+...+..         ....+ .+......++++|+++++++++ .++.|.
T Consensus        82 p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~---------~~~~~-~~~~~~~~~~~~p~g~~l~v~~~~~~~v~  151 (330)
T PRK11028         82 PTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA---------PIQII-EGLEGCHSANIDPDNRTLWVPCLKEDRIR  151 (330)
T ss_pred             ceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCC---------ceeec-cCCCcccEeEeCCCCCEEEEeeCCCCEEE
Confidence            67899999999887765 478999999864221110         00111 1123456788999999886555 569999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEECC
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVIP  217 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~  217 (221)
                      +||+.+...+....     ..  ....  ........+.|+|+|+++++++. ++.|.+|+++
T Consensus       152 v~d~~~~g~l~~~~-----~~--~~~~--~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~  205 (330)
T PRK11028        152 LFTLSDDGHLVAQE-----PA--EVTT--VEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK  205 (330)
T ss_pred             EEEECCCCcccccC-----CC--ceec--CCCCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence            99997643221000     00  0000  01223567999999999988876 9999999997

>KOG2139|consensus

Probab=99.71  E-value=2.6e-15  Score=105.42  Aligned_cols=170  Identities=15%  Similarity=0.252  Sum_probs=118.2

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEec--CCcEEEecCCCcEEEEEcCCC----cc----------
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKP----NC----------   67 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~----~~----------   67 (221)
                      .+|++..|-.|++|+-..  +....++. ....|+|++|-|  ...|+.|+.. -|.+|.....    ..          
T Consensus       112 ~fava~nddvVriy~kss--t~pt~Lks~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~q  188 (445)
T KOG2139|consen  112 AFAVATNDDVVRIYDKSS--TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQ  188 (445)
T ss_pred             hhhhhccCcEEEEeccCC--CCCceecchhhcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccccccchh
Confidence            467888999999999763  33444442 345799999998  3446666654 4889986431    11          


Q ss_pred             ceeeeccccceeEEEEeCCCCEEEEecC-CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE
Q psy10662         68 LRSFVGHINDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA  146 (221)
Q Consensus        68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  146 (221)
                      +....+| .+|+++.|++||..+++++. +..|.|||..++..+...             ....+.+.-+.|+||+.+|.
T Consensus       189 vl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~-------------~~glgg~slLkwSPdgd~lf  254 (445)
T KOG2139|consen  189 VLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI-------------PKGLGGFSLLKWSPDGDVLF  254 (445)
T ss_pred             heeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc-------------ccCCCceeeEEEcCCCCEEE
Confidence            1112233 58999999999999988875 678999999888765431             23345678899999999999


Q ss_pred             EecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        147 CGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       147 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      ++.-|+..++|+....--....            .   -..+.|...+|+|+|++|..+.
T Consensus       255 aAt~davfrlw~e~q~wt~erw------------~---lgsgrvqtacWspcGsfLLf~~  299 (445)
T KOG2139|consen  255 AATCDAVFRLWQENQSWTKERW------------I---LGSGRVQTACWSPCGSFLLFAC  299 (445)
T ss_pred             Eecccceeeeehhcccceecce------------e---ccCCceeeeeecCCCCEEEEEE
Confidence            9999999999964322111000            0   1233799999999998765543

>KOG4227|consensus

Probab=99.70  E-value=9.4e-16  Score=108.92  Aligned_cols=166  Identities=7%  Similarity=0.098  Sum_probs=129.6

Q ss_pred             EEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCC------Cccceeee-ccccceeEEEEeCCCCEEEEecCCCeEE
Q psy10662         29 VFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINK------PNCLRSFV-GHINDKNFVGLATDGDYVACGSENNSLY  100 (221)
Q Consensus        29 ~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~  100 (221)
                      -+.+|.+.|.++.|+. +..|++|+.|..+++|++..      .+++.... .|.+.|.|++|.....++++|+.+++|.
T Consensus        51 D~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI  130 (609)
T KOG4227|consen   51 DVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVI  130 (609)
T ss_pred             hhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeE
Confidence            3457999999999994 66799999999999999853      46665543 3557899999999888999999999999


Q ss_pred             EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCc-eeeeeeecccccccc
Q psy10662        101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLER  179 (221)
Q Consensus       101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~  179 (221)
                      ..|+++.+.+..+.           .....+.|+.+..+|..+.+++.+.++.|.+||.+.... ...+..         
T Consensus       131 ~HDiEt~qsi~V~~-----------~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~---------  190 (609)
T KOG4227|consen  131 KHDIETKQSIYVAN-----------ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLP---------  190 (609)
T ss_pred             eeecccceeeeeec-----------ccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeee---------
Confidence            99999998877641           122335899999999999999999999999999876552 211110         


Q ss_pred             cccccccccceeEEEEcCC-CcEEEEecCCCeEEEEECCc
Q psy10662        180 DRNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       180 ~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~  218 (221)
                          ........++-|+|. -.+|++++..+-+.+||.+.
T Consensus       191 ----AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~  226 (609)
T KOG4227|consen  191 ----ANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRM  226 (609)
T ss_pred             ----cCCCccceeeeecCCCceeEEeccccCCCCceeecc
Confidence                122345678899995 46778888888899999864

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.70  E-value=2.2e-15  Score=114.33  Aligned_cols=174  Identities=13%  Similarity=0.069  Sum_probs=115.0

Q ss_pred             CCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCC---CcEEEEEcCCCccceeeeccccceeEEEEeCCC
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTD---SQLKLWNINKPNCLRSFVGHINDKNFVGLATDG   87 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d---~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~   87 (221)
                      +..|.+||.. ... .+.+..|...+.+.+|+|++ .|+.++.+   ..|++||+.+++... +....+.....+|+|+|
T Consensus       183 ~~~i~i~d~d-g~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~-l~~~~g~~~~~~wSPDG  259 (429)
T PRK01742        183 PYEVRVADYD-GFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV-VASFRGHNGAPAFSPDG  259 (429)
T ss_pred             eEEEEEECCC-CCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE-EecCCCccCceeECCCC
Confidence            4689999987 333 45566788899999999865 46665543   479999998775422 22222334578999999


Q ss_pred             CEEEEec-CCCeEEEE--ECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCC
Q psy10662         88 DYVACGS-ENNSLYIY--YKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSK  163 (221)
Q Consensus        88 ~~l~~~~-~d~~v~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~  163 (221)
                      +.|+.++ .+|.+.||  |+.+++..              .+..+...+....|+|||+.|+..+ .++...+|++....
T Consensus       260 ~~La~~~~~~g~~~Iy~~d~~~~~~~--------------~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~  325 (429)
T PRK01742        260 SRLAFASSKDGVLNIYVMGANGGTPS--------------QLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASG  325 (429)
T ss_pred             CEEEEEEecCCcEEEEEEECCCCCeE--------------eeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            9887654 67766555  55544321              2334555677899999999776554 57888888765432


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .....           .    .+..  ....|+|||++|+..+.++ +.+||+.+++
T Consensus       326 ~~~~~-----------l----~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~  364 (429)
T PRK01742        326 GGASL-----------V----GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGS  364 (429)
T ss_pred             CCeEE-----------e----cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCC
Confidence            21111           0    1111  3468999999998887765 5569988764

>KOG0644|consensus

Probab=99.69  E-value=2.4e-17  Score=126.50  Aligned_cols=117  Identities=20%  Similarity=0.373  Sum_probs=105.7

Q ss_pred             eEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECC
Q psy10662         27 LAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  105 (221)
Q Consensus        27 ~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~  105 (221)
                      ++.+.+|..+|+|..|.. +.++++|+.|..++||.++++.+.....+|.+.|+.++.+.+..++++++.|..|++|-+.
T Consensus       183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~  262 (1113)
T KOG0644|consen  183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP  262 (1113)
T ss_pred             HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC
Confidence            344567999999999984 6779999999999999999999999999999999999999988899999999999999999


Q ss_pred             CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662        106 LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      .+.++..             +.+|.+.|++++|+|-.    +.+.||++++||.+
T Consensus       263 ~~~pvsv-------------LrghtgavtaiafsP~~----sss~dgt~~~wd~r  300 (1113)
T KOG0644|consen  263 DGAPVSV-------------LRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR  300 (1113)
T ss_pred             CCchHHH-------------HhccccceeeeccCccc----cCCCCCceEecccc
Confidence            8887765             48999999999999964    78899999999987

>KOG3881|consensus

Probab=99.69  E-value=1.6e-15  Score=107.20  Aligned_cols=152  Identities=14%  Similarity=0.162  Sum_probs=124.6

Q ss_pred             CceEEEEeCC--CeEEEEEecCCceeeEEEEec---------cCceEEEEEec---CCcEEEecCCCcEEEEEcCCC-cc
Q psy10662          3 SCHLAFGSAD--HCVHYYDLRNTKEALAVFKGH---------RKAVSYVKFLN---KEDIVSASTDSQLKLWNINKP-NC   67 (221)
Q Consensus         3 ~~~l~~~~~d--g~i~i~~~~~~~~~~~~~~~~---------~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~-~~   67 (221)
                      ...+|+|+..  ..+.|||+++ .+.+..-+.-         .-.++++.|-+   ...|++++.-+.+++||.+.+ ++
T Consensus       161 p~Iva~GGke~~n~lkiwdle~-~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP  239 (412)
T KOG3881|consen  161 PYIVATGGKENINELKIWDLEQ-SKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP  239 (412)
T ss_pred             CceEecCchhcccceeeeeccc-ceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcc
Confidence            4578889999  8999999984 3333322111         12467888875   456999999999999999875 56


Q ss_pred             ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         68 LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                      +..+.-...++.++...|+++++++|..-+.+..+|++.++.....            +.+..+.++++-.+|..+++++
T Consensus       240 V~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~------------~kg~tGsirsih~hp~~~~las  307 (412)
T KOG3881|consen  240 VAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCG------------LKGITGSIRSIHCHPTHPVLAS  307 (412)
T ss_pred             eeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccc------------cCCccCCcceEEEcCCCceEEe
Confidence            6777777889999999999999999999999999999998877652            5778899999999999999999


Q ss_pred             ecCCCeEEEEEcCCCCceee
Q psy10662        148 GSENNSLYIYYKGLSKHMHA  167 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~  167 (221)
                      ++-|+.++|+|+.+.+.+..
T Consensus       308 ~GLDRyvRIhD~ktrkll~k  327 (412)
T KOG3881|consen  308 CGLDRYVRIHDIKTRKLLHK  327 (412)
T ss_pred             eccceeEEEeecccchhhhh
Confidence            99999999999998665543

>KOG2321|consensus

Probab=99.68  E-value=5.8e-15  Score=109.32  Aligned_cols=166  Identities=16%  Similarity=0.201  Sum_probs=127.0

Q ss_pred             EEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEee
Q psy10662         38 SYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD  116 (221)
Q Consensus        38 ~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  116 (221)
                      ..++++ |..-|+.++....|+-++++.|..+..+....+.++++..++-..+|++|+.+|.|..||.+....+..+...
T Consensus       137 RDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~  216 (703)
T KOG2321|consen  137 RDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAA  216 (703)
T ss_pred             ccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecc
Confidence            455555 4555788888888999999999998888777789999999999999999999999999999988887776322


Q ss_pred             cccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc
Q psy10662        117 TVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR  196 (221)
Q Consensus       117 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  196 (221)
                      ..  ............|+++.|+.+|-.+++|+.+|.+.|||+++.+++..-+              ++...+|..+.|.
T Consensus       217 ~~--v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd--------------h~~e~pi~~l~~~  280 (703)
T KOG2321|consen  217 SS--VNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD--------------HGYELPIKKLDWQ  280 (703)
T ss_pred             cc--cCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc--------------cCCccceeeeccc
Confidence            21  1111111223359999999999999999999999999999887754332              2345678899997


Q ss_pred             CC--CcEEEEecCCCeEEEEECCccc
Q psy10662        197 QL--SRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       197 ~~--~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.  +..+++. ....++|||-.+|+
T Consensus       281 ~~~~q~~v~S~-Dk~~~kiWd~~~Gk  305 (703)
T KOG2321|consen  281 DTDQQNKVVSM-DKRILKIWDECTGK  305 (703)
T ss_pred             ccCCCceEEec-chHHhhhcccccCC
Confidence            75  4566665 45689999988775

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.65  E-value=2.5e-13  Score=100.49  Aligned_cols=203  Identities=12%  Similarity=0.078  Sum_probs=126.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEE-ecCCCcEEEEEcCCCccceeeecc----
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVS-ASTDSQLKLWNINKPNCLRSFVGH----   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s-~~~d~~v~~wd~~~~~~~~~~~~~----   74 (221)
                      |||+++.+++.||.|.++|+. +.+.+++++. .....++++++++. +++ ....+.+.++|.++.+.++.+...    
T Consensus        46 ~Dgr~~yv~~rdg~vsviD~~-~~~~v~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~  123 (369)
T PF02239_consen   46 PDGRYLYVANRDGTVSVIDLA-TGKVVATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPV  123 (369)
T ss_dssp             T-SSEEEEEETTSEEEEEETT-SSSEEEEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-T
T ss_pred             CCCCEEEEEcCCCeEEEEECC-cccEEEEEec-CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccc
Confidence            689999999999999999998 7778888875 44568899997554 443 456899999998876655443200    


Q ss_pred             -----------------------------------------------ccceeEEEEeCCCCEEEE-ecCCCeEEEEECCC
Q psy10662         75 -----------------------------------------------INDKNFVGLATDGDYVAC-GSENNSLYIYYKGL  106 (221)
Q Consensus        75 -----------------------------------------------~~~v~~~~~~~~~~~l~~-~~~d~~v~iwd~~~  106 (221)
                                                                     ........|+|++++++. ...++.|-++|..+
T Consensus       124 ~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~  203 (369)
T PF02239_consen  124 DGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKT  203 (369)
T ss_dssp             TTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTT
T ss_pred             cccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeecc
Confidence                                                           011234567788887654 44566888899888


Q ss_pred             CeeeEEEE------------------------------------------eecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662        107 SKHMHAYR------------------------------------------FDTVRSMLESSFVGHINDKNFVGLATDGDY  144 (221)
Q Consensus       107 ~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  144 (221)
                      ++.+..+.                                          ++....+.++.+...... ..+..+|++++
T Consensus       204 ~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~  282 (369)
T PF02239_consen  204 GKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRY  282 (369)
T ss_dssp             TEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SE
T ss_pred             ceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCcc
Confidence            87766543                                          111222333444443333 56778999999


Q ss_pred             EEEe----cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC--CCeEEEEECCc
Q psy10662        145 VACG----SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS--QGIIKIYVIPI  218 (221)
Q Consensus       145 l~~~----~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iw~~~~  218 (221)
                      +.+.    ...+.|.++|.++.+....+..              +....+..+.|+++|+.+..+..  ++.|.+||..+
T Consensus       283 vwvd~~~~~~~~~v~viD~~tl~~~~~i~~--------------~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~T  348 (369)
T PF02239_consen  283 VWVDTFLNPDADTVQVIDKKTLKVVKTITP--------------GPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKT  348 (369)
T ss_dssp             EEEE-TT-SSHT-EEEEECCGTEEEE-HHH--------------HHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTT
T ss_pred             EEeeccCCCCCceEEEEECcCcceeEEEec--------------cCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCC
Confidence            9988    4558999999988755444320              11223788999999997766543  44799999988


Q ss_pred             cc
Q psy10662        219 RV  220 (221)
Q Consensus       219 ~~  220 (221)
                      .+
T Consensus       349 l~  350 (369)
T PF02239_consen  349 LK  350 (369)
T ss_dssp             TE
T ss_pred             cE
Confidence            65

...

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.65  E-value=1e-13  Score=105.11  Aligned_cols=185  Identities=10%  Similarity=0.060  Sum_probs=116.8

Q ss_pred             CCCceEEEEeC---CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEE-ecCCC--cEEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSA---DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVS-ASTDS--QLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~---dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s-~~~d~--~v~~wd~~~~~~~~~~~~   73 (221)
                      |||+.|+..+.   +..|.+|++. +++.. .+....+.+...+|+|++. |+. .+.+|  .|.+||+.+++... +..
T Consensus       208 PDG~~la~~s~~~g~~~i~i~dl~-~G~~~-~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~  284 (429)
T PRK03629        208 PDGSKLAYVTFESGRSALVIQTLA-NGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTD  284 (429)
T ss_pred             CCCCEEEEEEecCCCcEEEEEECC-CCCeE-EccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccC
Confidence            78988887543   3579999987 45432 2222344456789998665 543 34455  58899998876544 333


Q ss_pred             cccceeEEEEeCCCCEEEEecC-CCeEEEE--ECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         74 HINDKNFVGLATDGDYVACGSE-NNSLYIY--YKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~-d~~v~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      +...+....|+|+|+.|+..+. ++...+|  |+.+++.. .             +...........|+|+|++|+..+.
T Consensus       285 ~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~-------------lt~~~~~~~~~~~SpDG~~Ia~~~~  350 (429)
T PRK03629        285 GRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-R-------------ITWEGSQNQDADVSSDGKFMVMVSS  350 (429)
T ss_pred             CCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-E-------------eecCCCCccCEEECCCCCEEEEEEc
Confidence            4456788999999998876654 3444444  65554332 1             1222234456889999999877654


Q ss_pred             C---CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCe---EEEEECCcc
Q psy10662        151 N---NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGI---IKIYVIPIR  219 (221)
Q Consensus       151 d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~---i~iw~~~~~  219 (221)
                      +   ..|.+||+.++... .+.            .  ..  ......|+|||++|+.++.++.   +.++++..+
T Consensus       351 ~~g~~~I~~~dl~~g~~~-~Lt------------~--~~--~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~  408 (429)
T PRK03629        351 NGGQQHIAKQDLATGGVQ-VLT------------D--TF--LDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGR  408 (429)
T ss_pred             cCCCceEEEEECCCCCeE-EeC------------C--CC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence            3   35788888766432 111            0  01  1235789999999999887653   677777543

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.65  E-value=1.3e-13  Score=105.00  Aligned_cols=186  Identities=13%  Similarity=0.091  Sum_probs=121.9

Q ss_pred             CCCceEEEEeC---CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E-EEecCCCc--EEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSA---DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I-VSASTDSQ--LKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~---dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~~d~~--v~~wd~~~~~~~~~~~~   73 (221)
                      |||+.|+..+.   +..|++||+. +++. ..+..+.+.+...+|+|++. | ++.+.++.  |.+||+.+++. ..+..
T Consensus       211 pDG~~lay~s~~~g~~~i~~~dl~-~g~~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~  287 (435)
T PRK05137        211 PNRQEITYMSYANGRPRVYLLDLE-TGQR-ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTD  287 (435)
T ss_pred             CCCCEEEEEEecCCCCEEEEEECC-CCcE-EEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccC
Confidence            78998888764   4689999997 4443 34555677788899998654 4 45566655  77778877665 34545


Q ss_pred             cccceeEEEEeCCCCEEEEecC-CC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         74 HINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      +........|+|+|+.++..+. +|  .|.++|+..++...              +......+....|+|+|+.|+....
T Consensus       288 ~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~--------------lt~~~~~~~~~~~SpdG~~ia~~~~  353 (435)
T PRK05137        288 SPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR--------------ISFGGGRYSTPVWSPRGDLIAFTKQ  353 (435)
T ss_pred             CCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE--------------eecCCCcccCeEECCCCCEEEEEEc
Confidence            5556678999999998776653 33  57777876554321              1222344566789999999887654


Q ss_pred             C---CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC------CeEEEEECCccc
Q psy10662        151 N---NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ------GIIKIYVIPIRV  220 (221)
Q Consensus       151 d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~~  220 (221)
                      +   ..|.+||+..+.. ..+.                ....+..+.|+|||+.|+..+.+      ..+.++++.+++
T Consensus       354 ~~~~~~i~~~d~~~~~~-~~lt----------------~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~  415 (435)
T PRK05137        354 GGGQFSIGVMKPDGSGE-RILT----------------SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN  415 (435)
T ss_pred             CCCceEEEEEECCCCce-Eecc----------------CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc
Confidence            3   3577788654321 1110                11135678999999988765542      367788876543

>KOG1240|consensus

Probab=99.65  E-value=7e-15  Score=117.26  Aligned_cols=183  Identities=13%  Similarity=0.165  Sum_probs=127.9

Q ss_pred             EEecCCceeeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCc-------cceeeeccccceeEEEEeCCCC
Q psy10662         18 YDLRNTKEALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPN-------CLRSFVGHINDKNFVGLATDGD   88 (221)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~   88 (221)
                      |+++  +..+..+..|+..+..++.++ . ..+++||.||+|++|+.+.-.       ...++......+.++.+.+.++
T Consensus      1034 W~p~--G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~ 1111 (1431)
T KOG1240|consen 1034 WNPR--GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD 1111 (1431)
T ss_pred             CCcc--ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC
Confidence            5554  788888999999999999985 3 679999999999999986521       1222333456789999999999


Q ss_pred             EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCC-EEEEecCCCeEEEEEcCCCCcee
Q psy10662         89 YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGD-YVACGSENNSLYIYYKGLSKHMH  166 (221)
Q Consensus        89 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-~l~~~~~d~~i~~~d~~~~~~~~  166 (221)
                      .+|.++.||.|++.++...+..+..    .....+.........+..-+|.. .+. .++.+..-+.|..||+++.....
T Consensus      1112 ~~Av~t~DG~v~~~~id~~~~~~~~----~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w 1187 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSKRV----ATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAW 1187 (1431)
T ss_pred             eEEEEcCCCeEEEEEccccccccce----eeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHH
Confidence            9999999999999988753111110    00000001111112222333332 233 78888888999999998776554


Q ss_pred             eeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        167 AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ..+..             ...+.|++++.+|.++++++|+..|.+.+||++-+
T Consensus      1188 ~lk~~-------------~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~ 1227 (1431)
T KOG1240|consen 1188 RLKNQ-------------LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFR 1227 (1431)
T ss_pred             hhhcC-------------ccccceeEEEecCCceEEEEecCCceEEEEEeecC
Confidence            44322             23457999999999999999999999999999754

>KOG1538|consensus

Probab=99.65  E-value=1e-14  Score=110.14  Aligned_cols=170  Identities=20%  Similarity=0.315  Sum_probs=124.7

Q ss_pred             ceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCC--------
Q psy10662         36 AVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS--------  107 (221)
Q Consensus        36 ~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~--------  107 (221)
                      .|..++|-|++.-+....+..+.+||...|..+..+++|++.|++++|+.+|+.+|+|+.|..|.+|...-.        
T Consensus        14 ci~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~   93 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHN   93 (1081)
T ss_pred             chheeEECCCCceEEEecCCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccC
Confidence            789999998765333345678999999999999999999999999999999999999999999999975432        


Q ss_pred             eeeEEEEeecccceeE--------------eeE--EEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeee
Q psy10662        108 KHMHAYRFDTVRSMLE--------------SSF--VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD  171 (221)
Q Consensus       108 ~~~~~~~~~~~~~~~~--------------~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~  171 (221)
                      ..++...|++.+....              +..  ......+.+++|..||++++.|-.+|+|.+-+... +....    
T Consensus        94 D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~g-Eek~~----  168 (1081)
T KOG1538|consen   94 DAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNG-EEKVK----  168 (1081)
T ss_pred             CeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCC-CcceE----
Confidence            2233333333221110              001  12234678899999999999999999999985432 22111    


Q ss_pred             cccccccccccccccccceeEEEEcCCC-----cEEEEecCCCeEEEEECCc
Q psy10662        172 TVRSMLERDRNEDDTNEFVSAVCWRQLS-----RVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~l~~~~~dg~i~iw~~~~  218 (221)
                              +....+.+++|.+++|+|..     ..++......++.++.+..
T Consensus       169 --------I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG  212 (1081)
T KOG1538|consen  169 --------IERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSG  212 (1081)
T ss_pred             --------EeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecc
Confidence                    12233677899999999963     5788888888888888864

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.65  E-value=1.3e-13  Score=104.80  Aligned_cols=185  Identities=12%  Similarity=0.122  Sum_probs=118.7

Q ss_pred             CCCceEEEEeCC---CeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E-EEecCCC--cEEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSAD---HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I-VSASTDS--QLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~~d~--~v~~wd~~~~~~~~~~~~   73 (221)
                      |||+.|+..+.+   ..|++||+. +++. ..+....+...+.+|+|++. + ++.+.+|  .|++||+.+++.. .+..
T Consensus       213 pDg~~la~~s~~~~~~~l~~~dl~-~g~~-~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~  289 (433)
T PRK04922        213 PDGKKLAYVSFERGRSAIYVQDLA-TGQR-ELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTN  289 (433)
T ss_pred             CCCCEEEEEecCCCCcEEEEEECC-CCCE-EEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECcc
Confidence            789989887643   469999997 4443 23333455566889998654 4 3555555  5999999887643 3444


Q ss_pred             cccceeEEEEeCCCCEEEEecC-CCe--EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         74 HINDKNFVGLATDGDYVACGSE-NNS--LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~-d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      +.......+|+|+|+.++..+. +|.  |.++|+.+++... +             ..........+|+|+|+.|+..+.
T Consensus       290 ~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-l-------------t~~g~~~~~~~~SpDG~~Ia~~~~  355 (433)
T PRK04922        290 HFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-L-------------TFQGNYNARASVSPDGKKIAMVHG  355 (433)
T ss_pred             CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-e-------------ecCCCCccCEEECCCCCEEEEEEC
Confidence            5555577899999998876653 444  6666665554321 1             111223446899999999887654


Q ss_pred             CC---eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC---CCeEEEEECCcc
Q psy10662        151 NN---SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS---QGIIKIYVIPIR  219 (221)
Q Consensus       151 d~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~  219 (221)
                      ++   .|.+||+.+++.. .+.                +........|+|||++|+..+.   .+.|.++++..+
T Consensus       356 ~~~~~~I~v~d~~~g~~~-~Lt----------------~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~  413 (433)
T PRK04922        356 SGGQYRIAVMDLSTGSVR-TLT----------------PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGR  413 (433)
T ss_pred             CCCceeEEEEECCCCCeE-ECC----------------CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence            32   6899998766532 111                1112335689999998877664   346777777543

>KOG1524|consensus

Probab=99.65  E-value=3.9e-15  Score=109.56  Aligned_cols=143  Identities=15%  Similarity=0.192  Sum_probs=110.9

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeE
Q psy10662         47 DIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSF  126 (221)
Q Consensus        47 ~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~  126 (221)
                      .++.++.||.+.+.+ +.++.-+.+..|.+.+.+-.|+|+|.-++++++||.|++|.-.              ++....+
T Consensus        77 ~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs--------------GMLRStl  141 (737)
T KOG1524|consen   77 TLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS--------------GMLRSTV  141 (737)
T ss_pred             eEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc--------------chHHHHH
Confidence            488999999999987 4677777888999999999999999999999999999999632              2222233


Q ss_pred             EEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        127 VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       127 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      .....+|+|++|.|+.+-++-+. .+.+.+=-+.....+-               ....|++-|.++.|++..+++++|+
T Consensus       142 ~Q~~~~v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n~k~i---------------~WkAHDGiiL~~~W~~~s~lI~sgG  205 (737)
T KOG1524|consen  142 VQNEESIRCARWAPNSNSIVFCQ-GGHISIKPLAANSKII---------------RWRAHDGLVLSLSWSTQSNIIASGG  205 (737)
T ss_pred             hhcCceeEEEEECCCCCceEEec-CCeEEEeeccccccee---------------EEeccCcEEEEeecCccccceeecC
Confidence            44567899999999887665443 3455554443332222               2347999999999999999999999


Q ss_pred             CCCeEEEEECCccc
Q psy10662        207 SQGIIKIYVIPIRV  220 (221)
Q Consensus       207 ~dg~i~iw~~~~~~  220 (221)
                      +|-..++||-....
T Consensus       206 ED~kfKvWD~~G~~  219 (737)
T KOG1524|consen  206 EDFRFKIWDAQGAN  219 (737)
T ss_pred             CceeEEeecccCcc
Confidence            99999999986543

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.64  E-value=1.3e-12  Score=96.62  Aligned_cols=195  Identities=10%  Similarity=0.072  Sum_probs=128.6

Q ss_pred             ceE-EEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          4 CHL-AFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         4 ~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      +++ ++-..+|.|.+.|.. +.+.+..+......-..+.|+| ++++++++.||.|.++|+.+.+.+.+++... ....+
T Consensus         6 ~l~~V~~~~~~~v~viD~~-t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i   83 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGA-TNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGI   83 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETT-T-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEE
T ss_pred             cEEEEEecCCCEEEEEECC-CCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceE
Confidence            344 455568999999998 7888888886544445577887 4557788899999999999999998886443 46889


Q ss_pred             EEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EEecCCCeEEEEEc
Q psy10662         82 GLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYYK  159 (221)
Q Consensus        82 ~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~  159 (221)
                      +++++|++++++. ..+.+.++|.++.+.++.+.......      ......+..+..+|....+ ++--+.+.|.+.|.
T Consensus        84 ~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~------~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy  157 (369)
T PF02239_consen   84 AVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPV------DGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDY  157 (369)
T ss_dssp             EE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-T------TTS---EEEEEE-SSSSEEEEEETTTTEEEEEET
T ss_pred             EEcCCCCEEEEEecCCCceeEeccccccceeecccccccc------cccCCCceeEEecCCCCEEEEEEccCCeEEEEEe
Confidence            9999999987665 68899999999999988762110000      0023456677778877744 44455588888887


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCccc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPIRV  220 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~  220 (221)
                      ...+.+..-..+              .........|+|++++++.+ ..++.|-++|.++++
T Consensus       158 ~d~~~~~~~~i~--------------~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k  205 (369)
T PF02239_consen  158 SDPKNLKVTTIK--------------VGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGK  205 (369)
T ss_dssp             TTSSCEEEEEEE----------------TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred             ccccccceeeec--------------ccccccccccCcccceeeecccccceeEEEeeccce
Confidence            765443222111              12245678999999987664 567799999998765

...

>KOG2321|consensus

Probab=99.64  E-value=1.8e-14  Score=106.74  Aligned_cols=185  Identities=18%  Similarity=0.206  Sum_probs=140.9

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeee------ccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFV------GHI   75 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~------~~~   75 (221)
                      ..+++.|+ ...|+=++++ .+.-+..+....+.++++..++ .+.|++|+.+|.|..||.+....+..+.      .|.
T Consensus       146 cDly~~gs-g~evYRlNLE-qGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~p  223 (703)
T KOG2321|consen  146 CDLYLVGS-GSEVYRLNLE-QGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHP  223 (703)
T ss_pred             ccEEEeec-CcceEEEEcc-ccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCc
Confidence            34555554 4467778888 7887888887778999999998 5567777889999999998876655442      222


Q ss_pred             c-----ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC--CCEEEEe
Q psy10662         76 N-----DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD--GDYVACG  148 (221)
Q Consensus        76 ~-----~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~  148 (221)
                      +     .|+++.|+.+|-.+++|+.+|.+.|||+++.+++..-            -.+..-+|..+.|.+.  ++.++ .
T Consensus       224 g~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k------------dh~~e~pi~~l~~~~~~~q~~v~-S  290 (703)
T KOG2321|consen  224 GGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK------------DHGYELPIKKLDWQDTDQQNKVV-S  290 (703)
T ss_pred             cccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec------------ccCCccceeeecccccCCCceEE-e
Confidence            2     4999999998989999999999999999998886542            1233456778888764  33444 4


Q ss_pred             cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .....++|||-.+++....+.                ....++.+|+-|++.+++++-.++.+..|-++.
T Consensus       291 ~Dk~~~kiWd~~~Gk~~asiE----------------pt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~  344 (703)
T KOG2321|consen  291 MDKRILKIWDECTGKPMASIE----------------PTSDLNDFCFVPGSGMFFTANESSKMHTYYIPS  344 (703)
T ss_pred             cchHHhhhcccccCCceeecc----------------ccCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence            456789999998888766553                344589999999999999999999888887763

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.64  E-value=2e-13  Score=103.96  Aligned_cols=173  Identities=12%  Similarity=0.051  Sum_probs=116.5

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecC---CCcEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAST---DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~---d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .|.++|.+  +...+.+..|...+.+.+|+|++. |+..+.   +..|.+||+.+++.. .+..+.+.+...+|+|+|+.
T Consensus       183 ~l~~~d~d--g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~  259 (435)
T PRK05137        183 RLAIMDQD--GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRK  259 (435)
T ss_pred             EEEEECCC--CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCE
Confidence            78888875  344456667888999999998654 665542   468999999887653 34445667788999999987


Q ss_pred             EE-EecCCCe--EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CC--eEEEEEcCCCC
Q psy10662         90 VA-CGSENNS--LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSK  163 (221)
Q Consensus        90 l~-~~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~  163 (221)
                      ++ +.+.++.  |.+||+.+++...              +..+........|+|||+.|+..+. +|  .|+++|+..+.
T Consensus       260 la~~~~~~g~~~Iy~~d~~~~~~~~--------------Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~  325 (435)
T PRK05137        260 VVMSLSQGGNTDIYTMDLRSGTTTR--------------LTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN  325 (435)
T ss_pred             EEEEEecCCCceEEEEECCCCceEE--------------ccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC
Confidence            65 5555554  7777887665422              2333444567899999998876663 33  57777866543


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC---CeEEEEECCcc
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ---GIIKIYVIPIR  219 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~  219 (221)
                      .. .+.               .+...+....|+|+|++|+..+.+   ..|.+|++.++
T Consensus       326 ~~-~lt---------------~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~  368 (435)
T PRK05137        326 PR-RIS---------------FGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGS  368 (435)
T ss_pred             eE-Eee---------------cCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence            32 111               112335568899999999876542   36888887654

>KOG4497|consensus

Probab=99.64  E-value=6.3e-15  Score=102.47  Aligned_cols=197  Identities=12%  Similarity=0.122  Sum_probs=126.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-c-EEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-D-IVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      |+|+++|+++.- .+.|-|.+ +-+..+.+. --+.|.-+.|..+. + |.....++.|.+|++...+-...+.....++
T Consensus        18 p~g~yiAs~~~y-rlviRd~~-tlq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agl   94 (447)
T KOG4497|consen   18 PCGNYIASLSRY-RLVIRDSE-TLQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGL   94 (447)
T ss_pred             CCCCeeeeeeee-EEEEeccc-hhhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcc
Confidence            789999998655 77777776 444433333 24568888898543 3 5566789999999999999888888888899


Q ss_pred             eEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe---E
Q psy10662         79 NFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS---L  154 (221)
Q Consensus        79 ~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---i  154 (221)
                      .+++|+|+|+. +.+...+-.|.+|.+.+.+....              +.....+..++|+|+|++.+..+....   +
T Consensus        95 s~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~--------------~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv  160 (447)
T KOG4497|consen   95 SSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL--------------PHPKTNVKGYAFHPDGQFCAILSRRDCKDYV  160 (447)
T ss_pred             eeeeECCCcceEeeeecceeEEEEEEeccceeEEe--------------cccccCceeEEECCCCceeeeeecccHHHHH
Confidence            99999999965 55666788999999987665422              222334566777777777666554211   1


Q ss_pred             EEE-----------EcCCCCceeeeeeeccccccccccc------cc-ccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        155 YIY-----------YKGLSKHMHAYRFDTVRSMLERDRN------ED-DTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       155 ~~~-----------d~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      .+.           ++.+- .+.-+.+.+.+..+.....      .. .-.-.+..+.|+|.+++|+.|+.|+.+|+-+
T Consensus       161 ~i~~c~~W~ll~~f~~dT~-DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvln  238 (447)
T KOG4497|consen  161 QISSCKAWILLKEFKLDTI-DLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLN  238 (447)
T ss_pred             HHHhhHHHHHHHhcCCCcc-cccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhc
Confidence            111           00000 0011112222221111000      00 1124688999999999999999999988754

>KOG0974|consensus

Probab=99.64  E-value=2e-14  Score=112.79  Aligned_cols=185  Identities=14%  Similarity=0.140  Sum_probs=141.0

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCce---EEEE--EecC-CcEEEecCCCcEEEEEcCCCccceeeecccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAV---SYVK--FLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i---~~~~--~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      ...++.+..++.+.+||.. .......+. +....   .++-  ++++ -++++|+.-+.|.+|+....+....+.+|.+
T Consensus        99 ~k~i~l~~~~ns~~i~d~~-~~~~~~~i~-~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG  176 (967)
T KOG0974|consen   99 NKKIALVTSRNSLLIRDSK-NSSVLSKIQ-SDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEG  176 (967)
T ss_pred             cceEEEEEcCceEEEEecc-cCceehhcC-CCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCC
Confidence            4567888889999999987 444444443 22221   1111  2233 3488999999999999874333335789999


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      .|.++.++.+|.++++.|+|..+++|++.+.+....            ...+|...+..+.|.|+  .++++++|.+.++
T Consensus       177 ~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~------------~~fgHsaRvw~~~~~~n--~i~t~gedctcrv  242 (967)
T KOG0974|consen  177 SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGC------------TGFGHSARVWACCFLPN--RIITVGEDCTCRV  242 (967)
T ss_pred             ceEEEEEccCCcEEEEEecCcceeeeecccccccCc------------ccccccceeEEEEeccc--eeEEeccceEEEE
Confidence            999999999999999999999999999998776541            34689999999999998  9999999999999


Q ss_pred             EEcCCCCceeeeeeeccccccccccccccc-ccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDT-NEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      |+..-... ..+               ..| ...|..++..++...++|++.|+.+++|++...
T Consensus       243 W~~~~~~l-~~y---------------~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r  290 (967)
T KOG0974|consen  243 WGVNGTQL-EVY---------------DEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR  290 (967)
T ss_pred             Eeccccee-hhh---------------hhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence            95432221 111               123 346889999999999999999999999998654

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=1.8e-13  Score=103.80  Aligned_cols=174  Identities=10%  Similarity=0.041  Sum_probs=110.1

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecC---CCcEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAST---DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~---d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .|.++|..  +...+.+..+...+.+.+|+|++ .|+..+.   ...|.+||+.+++... +....+.+...+|+|+|+.
T Consensus       177 ~L~~~D~d--G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~  253 (427)
T PRK02889        177 QLQISDAD--GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRT  253 (427)
T ss_pred             EEEEECCC--CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCE
Confidence            56666654  44444555678889999999865 4655543   2459999998886543 3334455678999999998


Q ss_pred             EE-EecCCCeEEEEEC--CCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CCeEEEEEcC--CCC
Q psy10662         90 VA-CGSENNSLYIYYK--GLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NNSLYIYYKG--LSK  163 (221)
Q Consensus        90 l~-~~~~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~--~~~  163 (221)
                      ++ +.+.++...+|.+  ..++. .             .+..+........|+|||+.|+..+. ++...+|.+.  .+.
T Consensus       254 la~~~~~~g~~~Iy~~d~~~~~~-~-------------~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~  319 (427)
T PRK02889        254 LAVALSRDGNSQIYTVNADGSGL-R-------------RLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA  319 (427)
T ss_pred             EEEEEccCCCceEEEEECCCCCc-E-------------ECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc
Confidence            75 5677777666654  33321 1             12233334556789999998876554 4566666543  222


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC---eEEEEECCccc
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG---IIKIYVIPIRV  220 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~  220 (221)
                      . ..+.+               ........+|+|||++|+..+.++   .|.+|++.+++
T Consensus       320 ~-~~lt~---------------~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~  363 (427)
T PRK02889        320 A-QRVTF---------------TGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQ  363 (427)
T ss_pred             e-EEEec---------------CCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCC
Confidence            1 11110               111233578999999998776543   69999998764

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=1.3e-13  Score=104.96  Aligned_cols=175  Identities=10%  Similarity=0.085  Sum_probs=114.3

Q ss_pred             CeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecC---CCcEEEEEcCCCccceeeeccccceeEEEEeCCCC
Q psy10662         13 HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAST---DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD   88 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~---d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~   88 (221)
                      ..|.+||..  +...+.+..+...+.+.+|+|++ .|+.++.   +..|.+||+.+++... +....+...+.+|+|+|+
T Consensus       184 ~~l~i~D~~--g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~  260 (433)
T PRK04922        184 YALQVADSD--GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGR  260 (433)
T ss_pred             EEEEEECCC--CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCC
Confidence            368888876  33344566677889999999865 4666553   3469999998776533 333444556789999999


Q ss_pred             EEE-EecCCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CCe--EEEEEcCCC
Q psy10662         89 YVA-CGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NNS--LYIYYKGLS  162 (221)
Q Consensus        89 ~l~-~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~~~d~~~~  162 (221)
                      .++ +.+.++  .|.+||+.+++...              +..+.......+|+|+|+.|+..+. +|.  |+++|+.++
T Consensus       261 ~l~~~~s~~g~~~Iy~~d~~~g~~~~--------------lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g  326 (433)
T PRK04922        261 RLALTLSRDGNPEIYVMDLGSRQLTR--------------LTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGG  326 (433)
T ss_pred             EEEEEEeCCCCceEEEEECCCCCeEE--------------CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            765 445554  58899988765421              2233334456899999998876654 444  556666554


Q ss_pred             CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC---eEEEEECCccc
Q psy10662        163 KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG---IIKIYVIPIRV  220 (221)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~  220 (221)
                      +.. .+.+               +......++|+|||++|+..+.++   .|.+|++.+++
T Consensus       327 ~~~-~lt~---------------~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~  371 (433)
T PRK04922        327 SAE-RLTF---------------QGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS  371 (433)
T ss_pred             CeE-Eeec---------------CCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC
Confidence            321 1110               112234689999999998765432   69999998764

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=6.2e-13  Score=100.88  Aligned_cols=174  Identities=10%  Similarity=0.027  Sum_probs=111.6

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEec---CCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAS---TDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~---~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .|.++|.+ ... .+.+..+...+.+.+|+|++. |+..+   .+..+.+|++.+++... +....+.+....|+|+|+.
T Consensus       180 ~l~~~d~d-g~~-~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~  256 (429)
T PRK03629        180 ELRVSDYD-GYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSK  256 (429)
T ss_pred             eEEEEcCC-CCC-CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCE
Confidence            68888876 332 344455677899999998654 55433   34579999998775432 2223334557899999998


Q ss_pred             EEEe-cCCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC-CeEEEE--EcCCCC
Q psy10662         90 VACG-SENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN-NSLYIY--YKGLSK  163 (221)
Q Consensus        90 l~~~-~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~--d~~~~~  163 (221)
                      |+.. +.+|  .|.+||+.+++....              ..+...+....|+|+|+.|+..+.+ +...+|  |+..+.
T Consensus       257 La~~~~~~g~~~I~~~d~~tg~~~~l--------------t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~  322 (429)
T PRK03629        257 LAFALSKTGSLNLYVMDLASGQIRQV--------------TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA  322 (429)
T ss_pred             EEEEEcCCCCcEEEEEECCCCCEEEc--------------cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC
Confidence            7654 4444  588899887654321              2223456778999999988766654 444444  554443


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC---CeEEEEECCccc
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ---GIIKIYVIPIRV  220 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~  220 (221)
                      .. .+.               ..........|+|||++|+..+.+   ..|.+||+.+++
T Consensus       323 ~~-~lt---------------~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~  366 (429)
T PRK03629        323 PQ-RIT---------------WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG  366 (429)
T ss_pred             eE-Eee---------------cCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCC
Confidence            21 111               112234568899999998876542   458889988764

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=6e-13  Score=101.02  Aligned_cols=182  Identities=16%  Similarity=0.134  Sum_probs=113.2

Q ss_pred             CCCceEEEEeCC---CeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEE-EecCCCcEEEEEc--CCCccceeeec
Q psy10662          1 MNSCHLAFGSAD---HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIV-SASTDSQLKLWNI--NKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~-s~~~d~~v~~wd~--~~~~~~~~~~~   73 (221)
                      |||+.|+..+.+   ..|.+||+. +++.. .+....+.+.+.+|+|++ .|+ +.+.++...+|.+  ..+. ...+..
T Consensus       205 PDG~~la~~s~~~~~~~I~~~dl~-~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~  281 (427)
T PRK02889        205 PDGTKLAYVSFESKKPVVYVHDLA-TGRRR-VVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQ  281 (427)
T ss_pred             CCCCEEEEEEccCCCcEEEEEECC-CCCEE-EeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCC
Confidence            789999887643   359999997 45433 333345567789999865 454 5677887666654  4333 444544


Q ss_pred             cccceeEEEEeCCCCEEEEecC-CCeEEEEEC--CCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         74 HINDKNFVGLATDGDYVACGSE-NNSLYIYYK--GLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      +........|+|||+.++..+. ++...+|.+  ..++.. .+             ..........+|+|+|++|+..+.
T Consensus       282 ~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~l-------------t~~g~~~~~~~~SpDG~~Ia~~s~  347 (427)
T PRK02889        282 SSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RV-------------TFTGSYNTSPRISPDGKLLAYISR  347 (427)
T ss_pred             CCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EE-------------ecCCCCcCceEECCCCCEEEEEEc
Confidence            5555677889999998765543 455566644  333221 11             111122335789999999987765


Q ss_pred             CC---eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC---eEEEEEC
Q psy10662        151 NN---SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG---IIKIYVI  216 (221)
Q Consensus       151 d~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~  216 (221)
                      ++   .|.+||+.+++... +.               . ........|+|||+.|+..+.++   .+.+.++
T Consensus       348 ~~g~~~I~v~d~~~g~~~~-lt---------------~-~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~  402 (427)
T PRK02889        348 VGGAFKLYVQDLATGQVTA-LT---------------D-TTRDESPSFAPNGRYILYATQQGGRSVLAAVSS  402 (427)
T ss_pred             cCCcEEEEEEECCCCCeEE-cc---------------C-CCCccCceECCCCCEEEEEEecCCCEEEEEEEC
Confidence            54   69999987765321 10               0 11234679999999988876533   3445454

>KOG1354|consensus

Probab=99.58  E-value=2.5e-13  Score=95.11  Aligned_cols=215  Identities=13%  Similarity=0.246  Sum_probs=133.0

Q ss_pred             CCceEEEEeCCCeEEEEEecCCce----eeEEEEecc------------CceEEEEEecC---CcEEEecCCCcEEEEEc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKE----ALAVFKGHR------------KAVSYVKFLNK---EDIVSASTDSQLKLWNI   62 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~----~~~~~~~~~------------~~i~~~~~~~~---~~l~s~~~d~~v~~wd~   62 (221)
                      .|.+||+|..+|.|.+|.-+...+    ....++.|.            ..|..+.|.++   ..++..+.|.+|++|.+
T Consensus        36 ~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdktiKlWKi  115 (433)
T KOG1354|consen   36 YGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTIKLWKI  115 (433)
T ss_pred             ccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCcceeeeee
Confidence            589999999999999997664333    334455554            46889999853   33777889999999988


Q ss_pred             CCCccc-----------------------------------eee-eccccceeEEEEeCCCCEEEEecCCCeEEEEECCC
Q psy10662         63 NKPNCL-----------------------------------RSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  106 (221)
Q Consensus        63 ~~~~~~-----------------------------------~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~  106 (221)
                      +.....                                   +.+ ..|.--|+++.++.|+..++++ .|-.|.+|.++-
T Consensus       116 ~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-DdLRINLWnlei  194 (433)
T KOG1354|consen  116 RERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-DDLRINLWNLEI  194 (433)
T ss_pred             eccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-cceeeeeccccc
Confidence            532110                                   011 1466678899999888877766 566788887653


Q ss_pred             CeeeEEEE----------------------------eecccc--------------------------eeEeeEEEeeCc
Q psy10662        107 SKHMHAYR----------------------------FDTVRS--------------------------MLESSFVGHIND  132 (221)
Q Consensus       107 ~~~~~~~~----------------------------~~~~~~--------------------------~~~~~~~~~~~~  132 (221)
                      ...-..+-                            +....+                          ....-+.+-...
T Consensus       195 ~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsS  274 (433)
T KOG1354|consen  195 IDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISS  274 (433)
T ss_pred             cCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhh
Confidence            32211111                            000000                          000111122345


Q ss_pred             eEEEEEecCCCEEEEecCCCeEEEEEcC-CCCceeeeeeecc-cccccccccccccccceeEEEEcCCCcEEEEecCCCe
Q psy10662        133 KNFVGLATDGDYVACGSENNSLYIYYKG-LSKHMHAYRFDTV-RSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGI  210 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  210 (221)
                      |..+.|+++|+++++-+. -+|++||+. ..+++..+..... ...+..+.... .-..-..++|+-++.+++||+..+.
T Consensus       275 ISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD-~IfdKFec~~sg~~~~v~TGsy~n~  352 (433)
T KOG1354|consen  275 ISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYEND-AIFDKFECSWSGNDSYVMTGSYNNV  352 (433)
T ss_pred             hhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhcc-chhheeEEEEcCCcceEecccccce
Confidence            778899999999997653 479999994 4455555443221 11111111100 0011245899999999999999999


Q ss_pred             EEEEECCcc
Q psy10662        211 IKIYVIPIR  219 (221)
Q Consensus       211 i~iw~~~~~  219 (221)
                      .+++++..|
T Consensus       353 frvf~~~~g  361 (433)
T KOG1354|consen  353 FRVFNLARG  361 (433)
T ss_pred             EEEecCCCC
Confidence            999996544

>KOG4547|consensus

Probab=99.57  E-value=1.4e-12  Score=96.92  Aligned_cols=186  Identities=10%  Similarity=0.115  Sum_probs=144.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEe---ccCceEEEEEe------c---------------CCcEEEecCCCcE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKG---HRKAVSYVKFL------N---------------KEDIVSASTDSQL   57 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~---~~~~i~~~~~~------~---------------~~~l~s~~~d~~v   57 (221)
                      -..++|....||.+++|+.. .++....+..   -++..++..|.      |               ...++-|...|.|
T Consensus         4 ~~~~~A~~~~~g~l~iw~t~-~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v   82 (541)
T KOG4547|consen    4 ALDYFALSTGDGRLRIWDTA-KNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV   82 (541)
T ss_pred             hhheEeecCCCCeEEEEEcc-CceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence            35789999999999999998 4544444431   12334444442      2               1137778889999


Q ss_pred             EEEEcCCCccceee--eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662         58 KLWNINKPNCLRSF--VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF  135 (221)
Q Consensus        58 ~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  135 (221)
                      .+|++..++.-..+  ..|.+.|.++.++.+-..|.+++.|+.+..|+....+.++.+             ......+.+
T Consensus        83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~-------------~~~~~~~~s  149 (541)
T KOG4547|consen   83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIW-------------KEQKPLVSS  149 (541)
T ss_pred             EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeee-------------ccCCCccce
Confidence            99999998887766  468899999999988889999999999999998888776654             566677889


Q ss_pred             EEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC-----CcEEEEe-cCCC
Q psy10662        136 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL-----SRVLVAA-NSQG  209 (221)
Q Consensus       136 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~-~~dg  209 (221)
                      ++.+|||..+++++  +.|++||+++++.+..|.               +|.++|++++|-.+     |.++.++ ..+.
T Consensus       150 l~is~D~~~l~~as--~~ik~~~~~~kevv~~ft---------------gh~s~v~t~~f~~~~~g~~G~~vLssa~~~r  212 (541)
T KOG4547|consen  150 LCISPDGKILLTAS--RQIKVLDIETKEVVITFT---------------GHGSPVRTLSFTTLIDGIIGKYVLSSAAAER  212 (541)
T ss_pred             EEEcCCCCEEEecc--ceEEEEEccCceEEEEec---------------CCCcceEEEEEEEeccccccceeeecccccc
Confidence            99999999999887  489999999998877664               89999999999887     6666554 4566


Q ss_pred             eEEEEECCc
Q psy10662        210 IIKIYVIPI  218 (221)
Q Consensus       210 ~i~iw~~~~  218 (221)
                      -|.+|-+..
T Consensus       213 ~i~~w~v~~  221 (541)
T KOG4547|consen  213 GITVWVVEK  221 (541)
T ss_pred             ceeEEEEEc
Confidence            678887654

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.56  E-value=3e-12  Score=97.29  Aligned_cols=183  Identities=13%  Similarity=0.124  Sum_probs=116.9

Q ss_pred             CCCceEEEEeCC---CeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EE-EecCCC--cEEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSAD---HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IV-SASTDS--QLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~-s~~~d~--~v~~wd~~~~~~~~~~~~   73 (221)
                      |||++|+.+..+   ..|++||+. +++. ..+..+.+.+.+++|+|++. |+ +.+.++  .|++||+.+++.. .+..
T Consensus       199 pdg~~la~~~~~~~~~~i~v~d~~-~g~~-~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~~  275 (417)
T TIGR02800       199 PDGQKLAYVSFESGKPEIYVQDLA-TGQR-EKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLTN  275 (417)
T ss_pred             CCCCEEEEEEcCCCCcEEEEEECC-CCCE-EEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE-ECCC
Confidence            688888887654   479999997 4433 23344566677899998654 54 445444  5888998776543 3333


Q ss_pred             cccceeEEEEeCCCCEEEEecC-CC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         74 HINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      +........|+|+++.++..+. ++  .|.++|+.+++...              +..+........|+|+|++++.++.
T Consensus       276 ~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~--------------l~~~~~~~~~~~~spdg~~i~~~~~  341 (417)
T TIGR02800       276 GPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR--------------LTFRGGYNASPSWSPDGDLIAFVHR  341 (417)
T ss_pred             CCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE--------------eecCCCCccCeEECCCCCEEEEEEc
Confidence            4444557789999998765543 33  57777776554321              1223345567889999999988887


Q ss_pred             CC---eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC---eEEEEECC
Q psy10662        151 NN---SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG---IIKIYVIP  217 (221)
Q Consensus       151 d~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~~  217 (221)
                      ++   .|.+||+.++... .+.               . ........|+|+|++|+..+.++   .+.+.+..
T Consensus       342 ~~~~~~i~~~d~~~~~~~-~l~---------------~-~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~  397 (417)
T TIGR02800       342 EGGGFNIAVMDLDGGGER-VLT---------------D-TGLDESPSFAPNGRMILYATTRGGRGVLGLVSTD  397 (417)
T ss_pred             cCCceEEEEEeCCCCCeE-Ecc---------------C-CCCCCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence            65   7888888764321 110               0 01123468999999888877543   45555543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.56  E-value=2.4e-12  Score=97.90  Aligned_cols=173  Identities=9%  Similarity=0.109  Sum_probs=112.7

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCC---CcEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTD---SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d---~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .|.++|..  +...+.+..+...+...+|+|++. |+.+..+   ..|++||+.+++... +..+...+.+.+|+|+++.
T Consensus       171 ~l~~~d~~--g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~  247 (417)
T TIGR02800       171 ELQVADYD--GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSK  247 (417)
T ss_pred             eEEEEcCC--CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCE
Confidence            57777765  333445555677789999998654 5554432   479999998875543 3335556677899999987


Q ss_pred             EE-EecCCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CC--eEEEEEcCCCC
Q psy10662         90 VA-CGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSK  163 (221)
Q Consensus        90 l~-~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~  163 (221)
                      |+ +.+.++  .|.+||+.+++...              +..+........|+|+|+.|+..+. ++  .|+++|+.+++
T Consensus       248 l~~~~~~~~~~~i~~~d~~~~~~~~--------------l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~  313 (417)
T TIGR02800       248 LAVSLSKDGNPDIYVMDLDGKQLTR--------------LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE  313 (417)
T ss_pred             EEEEECCCCCccEEEEECCCCCEEE--------------CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            65 444444  58888887664321              1222233445689999998876554 33  57777776544


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC---eEEEEECCcc
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG---IIKIYVIPIR  219 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~  219 (221)
                      .. .+.               .+...+..+.|+|+|++|+.++.++   .|.+|++.++
T Consensus       314 ~~-~l~---------------~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~  356 (417)
T TIGR02800       314 VR-RLT---------------FRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGG  356 (417)
T ss_pred             EE-Eee---------------cCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCC
Confidence            21 111               1223456789999999999887765   7889988765

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG0974|consensus

Probab=99.55  E-value=9.2e-14  Score=109.15  Aligned_cols=145  Identities=14%  Similarity=0.153  Sum_probs=119.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccce-eeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLR-SFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~-~~~~~~~~v~   79 (221)
                      +.-++++|+.-+.|.+|+......+. .+.+|++.|.++.|+ ++.+++++|.|+++++|++.+.+... ..-+|...+.
T Consensus       144 ~~~~i~~gsv~~~iivW~~~~dn~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw  222 (967)
T KOG0974|consen  144 EELYIASGSVFGEIIVWKPHEDNKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVW  222 (967)
T ss_pred             cEEEEEeccccccEEEEeccccCCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeE
Confidence            34578899999999999998444444 678999999999998 57779999999999999999987766 5568999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEee-CceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHI-NDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      .+.|.|+  +++++++|.+.++|+..-.+. .             .+.+|. ..+..++..++...+++++.|+.+++|+
T Consensus       223 ~~~~~~n--~i~t~gedctcrvW~~~~~~l-~-------------~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~  286 (967)
T KOG0974|consen  223 ACCFLPN--RIITVGEDCTCRVWGVNGTQL-E-------------VYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWD  286 (967)
T ss_pred             EEEeccc--eeEEeccceEEEEEeccccee-h-------------hhhhhhhcceeEEEEcCCceEEEeeccCcchhhhh
Confidence            9999998  899999999999996543221 1             234443 4678899999999999999999999999


Q ss_pred             cCCCC
Q psy10662        159 KGLSK  163 (221)
Q Consensus       159 ~~~~~  163 (221)
                      +....
T Consensus       287 l~~r~  291 (967)
T KOG0974|consen  287 LNGRG  291 (967)
T ss_pred             hhccc
Confidence            76543

>KOG1334|consensus

Probab=99.54  E-value=1.9e-13  Score=99.50  Aligned_cols=218  Identities=17%  Similarity=0.180  Sum_probs=144.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCcc---ceeeeccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPNC---LRSFVGHI   75 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~~---~~~~~~~~   75 (221)
                      .|..|++|+.|..|.+||.......+.-..+|...|..-.|-|   +..+++++.||.+++=.+.....   ...+..|.
T Consensus       153 ~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~  232 (559)
T KOG1334|consen  153 RGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHE  232 (559)
T ss_pred             cCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceeccccc
Confidence            4788999999999999999844444444467888888888876   46699999999999877643322   33455688


Q ss_pred             cceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEE----------------eecccc------------------
Q psy10662         76 NDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYR----------------FDTVRS------------------  120 (221)
Q Consensus        76 ~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~----------------~~~~~~------------------  120 (221)
                      ++|.-++.-|+.. .|.+++.|+.+.-+|++...+-..+.                .++.+.                  
T Consensus       233 g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R  312 (559)
T KOG1334|consen  233 GPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQR  312 (559)
T ss_pred             CccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhccc
Confidence            9999999988776 47889999999888887654322221                000000                  


Q ss_pred             --------eeEeeEE------EeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662        121 --------MLESSFV------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT  186 (221)
Q Consensus       121 --------~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (221)
                              ..+..+.      .....|++++|+.++.-++++-.|-.|+++....+.-.......+........  +++|
T Consensus       313 ~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~v--YKGH  390 (559)
T KOG1334|consen  313 RIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRV--YKGH  390 (559)
T ss_pred             chhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchh--hccc
Confidence                    0001111      12346889999988888888888889999954333221111111111111121  3344


Q ss_pred             --ccceeEEE-EcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        187 --NEFVSAVC-WRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       187 --~~~v~~~~-~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                        ...|..+- |-|...|+++|+.-|.|.||+-.++++
T Consensus       391 rN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~ei  428 (559)
T KOG1334|consen  391 RNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEI  428 (559)
T ss_pred             ccccccceeeeccCccceEEecCccceEEEEecchhHH
Confidence              34477775 467889999999999999999888753

>KOG4497|consensus

Probab=99.54  E-value=1.3e-12  Score=91.18  Aligned_cols=196  Identities=15%  Similarity=0.199  Sum_probs=131.9

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-c-EEEecCCCcEEEEEcCCCcccee-----------e
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-D-IVSASTDSQLKLWNINKPNCLRS-----------F   71 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-l~s~~~d~~v~~wd~~~~~~~~~-----------~   71 (221)
                      .|..+..++.|.+|++. ..+-...+....+++.+++|+|++ . |.+..-+-.|.+|.+.+.+....           +
T Consensus        63 ilC~~yk~~~vqvwsl~-Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f  141 (447)
T KOG4497|consen   63 ILCVAYKDPKVQVWSLV-QPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAF  141 (447)
T ss_pred             eeeeeeccceEEEEEee-cceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEE
Confidence            46677889999999998 455455667678899999999976 4 55667799999999865322100           0


Q ss_pred             e----------------------------------------------------------------cc-ccceeEEEEeCC
Q psy10662         72 V----------------------------------------------------------------GH-INDKNFVGLATD   86 (221)
Q Consensus        72 ~----------------------------------------------------------------~~-~~~v~~~~~~~~   86 (221)
                      .                                                                -+ .-.+..++|+|.
T Consensus       142 ~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~  221 (447)
T KOG4497|consen  142 HPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPC  221 (447)
T ss_pred             CCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccc
Confidence            0                                                                01 124677888998


Q ss_pred             CCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------------e----------ecc--------c
Q psy10662         87 GDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------------F----------DTV--------R  119 (221)
Q Consensus        87 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~----------~~~--------~  119 (221)
                      +++++.|+.|+.+++.+--+.++..++-                             +          ...        .
T Consensus       222 ~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~  301 (447)
T KOG4497|consen  222 NQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMT  301 (447)
T ss_pred             cceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhc
Confidence            9999999999999887654444333221                             0          000        0


Q ss_pred             ceeE------eeEEEeeCceEEEEEecCCCEEEEecCC--CeEEEEEcCCCCceeeeeeeccccccccccccccccccee
Q psy10662        120 SMLE------SSFVGHINDKNFVGLATDGDYVACGSEN--NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVS  191 (221)
Q Consensus       120 ~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  191 (221)
                      ....      ..+......+.-++|++|..++++-.+.  +.+-+||++..+....+                ....+|.
T Consensus       302 pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL----------------iQk~pir  365 (447)
T KOG4497|consen  302 PVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL----------------IQKHPIR  365 (447)
T ss_pred             ceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh----------------hhcccee
Confidence            0000      1111223446679999999999987654  67899998766543322                2345789


Q ss_pred             EEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        192 AVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ...|+|....|+.+.....+++|...
T Consensus       366 af~WdP~~prL~vctg~srLY~W~ps  391 (447)
T KOG4497|consen  366 AFEWDPGRPRLVVCTGKSRLYFWAPS  391 (447)
T ss_pred             EEEeCCCCceEEEEcCCceEEEEcCC
Confidence            99999988888887777789999764

>KOG1064|consensus

Probab=99.53  E-value=8.3e-14  Score=115.03  Aligned_cols=176  Identities=16%  Similarity=0.255  Sum_probs=138.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEE-eccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFK-GHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ...+.+||+.||.|++|... .++.+..++ +....|+.+.|+ .++.+..+..||.+.+|... .++....+.|.....
T Consensus      2219 ~~~~Yltgs~dgsv~~~~w~-~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~ 2296 (2439)
T KOG1064|consen 2219 SDPYYLTGSQDGSVRMFEWG-HGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALS 2296 (2439)
T ss_pred             CCceEEecCCCceEEEEecc-CCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCcccc
Confidence            34567899999999999987 455555554 334789999998 57778899999999999986 667777788988888


Q ss_pred             EEEEeCCCCEEEEec---CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         80 FVGLATDGDYVACGS---ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      .+.|-.  ..+++++   .++.+.+||........          .+.  ..|.+.++++++.|..++|++|+.+|.|++
T Consensus      2297 Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s----------~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l 2362 (2439)
T KOG1064|consen 2297 DFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNS----------LVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCL 2362 (2439)
T ss_pred             ceeeee--hhhhccccCCCCCcccchhcccCcccc----------eee--eecCCCceEEEEcCcceEEEecCCcCcEEE
Confidence            888875  5566654   46789999975433222          222  789999999999999999999999999999


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ||++..+..+.++                    .    ++ ...++++|+..|.|+||++..
T Consensus      2363 ~D~rqrql~h~~~--------------------~----~~-~~~~f~~~ss~g~ikIw~~s~ 2399 (2439)
T KOG1064|consen 2363 FDIRQRQLRHTFQ--------------------A----LD-TREYFVTGSSEGNIKIWRLSE 2399 (2439)
T ss_pred             eehHHHHHHHHhh--------------------h----hh-hhheeeccCcccceEEEEccc
Confidence            9998777654442                    1    44 567899999999999999875

>KOG2139|consensus

Probab=99.53  E-value=5.8e-13  Score=93.87  Aligned_cols=164  Identities=13%  Similarity=0.186  Sum_probs=112.9

Q ss_pred             CceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeee-ccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeE
Q psy10662         35 KAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFV-GHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMH  111 (221)
Q Consensus        35 ~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~  111 (221)
                      -.+..++|++. ..++++..|..|++||-.. ++...++ .....|+|++|-|.+. .++.|+..| |.+|.....-...
T Consensus        99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~  176 (445)
T KOG2139|consen   99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNAN  176 (445)
T ss_pred             cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccc
Confidence            35778889873 3388899999999999766 4444443 2345799999999765 567777666 9999764321111


Q ss_pred             -EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662        112 -AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF  189 (221)
Q Consensus       112 -~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (221)
                       ....-....-.+....+| .+|+++.|.+||..+++++. +..|.+||..++..+....               ...+.
T Consensus       177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~---------------~glgg  240 (445)
T KOG2139|consen  177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIP---------------KGLGG  240 (445)
T ss_pred             cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccc---------------cCCCc
Confidence             000000000011122344 68999999999999998885 5789999998776543221               12345


Q ss_pred             eeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        190 VSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      ++-+.|||||.+|++++-|+..++|+.
T Consensus       241 ~slLkwSPdgd~lfaAt~davfrlw~e  267 (445)
T KOG2139|consen  241 FSLLKWSPDGDVLFAATCDAVFRLWQE  267 (445)
T ss_pred             eeeEEEcCCCCEEEEecccceeeeehh
Confidence            788999999999999999999999954

>KOG0280|consensus

Probab=99.51  E-value=1.7e-12  Score=89.15  Aligned_cols=192  Identities=11%  Similarity=0.078  Sum_probs=131.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCC-cccee-eecccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKP-NCLRS-FVGHIN   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~-~~~~~-~~~~~~   76 (221)
                      +..++++..+|.+.+-+.. ..  +.++.++.|.-+++..+|+.  .+.+++|+.|+.+..||++.+ +.+.. .+.|..
T Consensus       133 ~~~i~vs~s~G~~~~v~~t-~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~  211 (339)
T KOG0280|consen  133 GTKIFVSDSRGSISGVYET-EMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTS  211 (339)
T ss_pred             CceEEEEcCCCcEEEEecc-eeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeec
Confidence            4567888888988855443 22  33457889999999999983  466889999999999999943 33332 356888


Q ss_pred             ceeEEEEeCC-CCEEEEecCCCeEEEEECC-CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EEEEecCCCe
Q psy10662         77 DKNFVGLATD-GDYVACGSENNSLYIYYKG-LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YVACGSENNS  153 (221)
Q Consensus        77 ~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~  153 (221)
                      .|.++.-+|. ..++++|+.|-.|++||.+ .++++..              ..-.+.|..+..+|.-. .++.++.-.-
T Consensus       212 GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~--------------~~v~GGVWRi~~~p~~~~~lL~~CMh~G  277 (339)
T KOG0280|consen  212 GVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFK--------------AKVGGGVWRIKHHPEIFHRLLAACMHNG  277 (339)
T ss_pred             ceEEEecCCCCCceEEEeccccceeeeehhcccCcccc--------------CccccceEEEEecchhhhHHHHHHHhcC
Confidence            8999988764 5689999999999999998 4555433              12237789999988422 3333444444


Q ss_pred             EEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEE-EEECCcc
Q psy10662        154 LYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIK-IYVIPIR  219 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~-iw~~~~~  219 (221)
                      .++-+...+......          .......|.+-+..-.|......|+|++ .|..++ +|-.-++
T Consensus       278 ~ki~~~~~~~~e~~~----------~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~  335 (339)
T KOG0280|consen  278 AKILDSSDKVLEFQI----------VLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG  335 (339)
T ss_pred             ceEEEecccccchhe----------eeeccccccceeeccccccccceeeeeeccccceeeeeeeccC
Confidence            666666544332111          1223346777777778866667888876 488866 8866554

>KOG4532|consensus

Probab=99.50  E-value=2.5e-11  Score=82.59  Aligned_cols=193  Identities=12%  Similarity=0.040  Sum_probs=132.9

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-c-CCcEEEecCCCcEEEEEcCCCccceeeecccc--cee
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-N-KEDIVSASTDSQLKLWNINKPNCLRSFVGHIN--DKN   79 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~--~v~   79 (221)
                      .+||.|+..|...+|...+....++....|...|+-+.=. . .-.+..++.|.++++.+++.+......  |..  .+.
T Consensus        85 ~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~--h~~~~~~n  162 (344)
T KOG4532|consen   85 VTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAV--HNQNLTQN  162 (344)
T ss_pred             cEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccccee--ecccccee
Confidence            4789999999999999984444444444454444333211 1 234888899999999998655443332  333  378


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCee-eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ++.++++++++++.+....|-.|.+..... +..           .........-.+..|+.....+|++..||.+.|||
T Consensus       163 s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~-----------~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~D  231 (344)
T KOG4532|consen  163 SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIEN-----------IYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYD  231 (344)
T ss_pred             eeEEcCCCceEEEecCCCcceEEEeCCccceeee-----------eEecccCCCceeeeeccCcceEEEEecCCcEEEEE
Confidence            999999999999999999999998754322 111           01223344556788999999999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc--EEEEecCCCeEEEEECCcc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR--VLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++........          .-.....|.+.++.+.|++-|.  +|+..-.=+.+++.|++++
T Consensus       232 VR~~~tpm~~----------~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~  284 (344)
T KOG4532|consen  232 VRNMATPMAE----------ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNY  284 (344)
T ss_pred             ecccccchhh----------hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccC
Confidence            9865433222          1122335889999999998653  4555555678888888765

>KOG1409|consensus

Probab=99.48  E-value=5.9e-12  Score=88.27  Aligned_cols=148  Identities=17%  Similarity=0.249  Sum_probs=109.6

Q ss_pred             CCceEEEEeCCCeEEEEEecC---CceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCC-------------
Q psy10662          2 NSCHLAFGSADHCVHYYDLRN---TKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINK-------------   64 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~---~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~-------------   64 (221)
                      ....|.+|-..|++.-+.+..   ....++....|...+..+-|+ +...+++++.|..+.---.+.             
T Consensus        79 e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~  158 (404)
T KOG1409|consen   79 ESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPA  158 (404)
T ss_pred             cceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccC
Confidence            345788888888888887652   233445566788888888887 556677776665443221111             


Q ss_pred             ----------------------------CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEee
Q psy10662         65 ----------------------------PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD  116 (221)
Q Consensus        65 ----------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  116 (221)
                                                  ...+..+.+|.+.+.+++|.|....+++|..|..+.+||+.-.+.+..    
T Consensus       159 t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~----  234 (404)
T KOG1409|consen  159 SALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAY----  234 (404)
T ss_pred             CCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceee----
Confidence                                        123445568899999999999999999999999999999976554332    


Q ss_pred             cccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662        117 TVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus       117 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                              .+.+|...|..+...+--+.+.+++.||.|.+||.+.
T Consensus       235 --------el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~  271 (404)
T KOG1409|consen  235 --------ELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNV  271 (404)
T ss_pred             --------eeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccc
Confidence                    3578888898888888888999999999999999764

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.46  E-value=4.8e-10  Score=82.99  Aligned_cols=203  Identities=13%  Similarity=0.170  Sum_probs=122.1

Q ss_pred             CCCceEEEEe-CCCeEEEEEecCCceeeEEE--Eec-----------cCceEEEEEecCCc-EEEe-cCCCcEEEEEcCC
Q psy10662          1 MNSCHLAFGS-ADHCVHYYDLRNTKEALAVF--KGH-----------RKAVSYVKFLNKED-IVSA-STDSQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~--~~~-----------~~~i~~~~~~~~~~-l~s~-~~d~~v~~wd~~~   64 (221)
                      |++++|+++. .+|.|.++++...+.+....  ..|           .....++.|+|++. +++. -....|.+|++..
T Consensus        96 ~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~  175 (345)
T PF10282_consen   96 PDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDD  175 (345)
T ss_dssp             TTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-T
T ss_pred             cCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence            5788888876 48999999998545433321  111           23478999998654 4443 3356799999976


Q ss_pred             Cc--cc--eeee-ccccceeEEEEeCCCCEEE-EecCCCeEEEEECC--CCeeeEEEEeecccceeEeeEEEeeCceEEE
Q psy10662         65 PN--CL--RSFV-GHINDKNFVGLATDGDYVA-CGSENNSLYIYYKG--LSKHMHAYRFDTVRSMLESSFVGHINDKNFV  136 (221)
Q Consensus        65 ~~--~~--~~~~-~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  136 (221)
                      ..  ..  ..+. ........+.|+|+++++. +...++.|.++++.  .++....-.......    .. ........+
T Consensus       176 ~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~----~~-~~~~~~~~i  250 (345)
T PF10282_consen  176 DTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE----GF-TGENAPAEI  250 (345)
T ss_dssp             TS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET----TS-CSSSSEEEE
T ss_pred             CCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc----cc-cccCCceeE
Confidence            54  21  1221 2334568999999999764 44567889999887  332211100000000    00 011256789


Q ss_pred             EEecCCCEEEEecC-CCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEE
Q psy10662        137 GLATDGDYVACGSE-NNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKI  213 (221)
Q Consensus       137 ~~~~~~~~l~~~~~-d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i  213 (221)
                      +++|+|++|.++.. .+.|.+|++... ..+.....-            .......+.+.++|+|++|+++. .++.|.+
T Consensus       251 ~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~------------~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~v  318 (345)
T PF10282_consen  251 AISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTV------------PTGGKFPRHFAFSPDGRYLYVANQDSNTVSV  318 (345)
T ss_dssp             EE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEE------------EESSSSEEEEEE-TTSSEEEEEETTTTEEEE
T ss_pred             EEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEE------------eCCCCCccEEEEeCCCCEEEEEecCCCeEEE
Confidence            99999999887664 578999998432 222222211            11123468899999999998877 5789999


Q ss_pred             EECC--ccc
Q psy10662        214 YVIP--IRV  220 (221)
Q Consensus       214 w~~~--~~~  220 (221)
                      |++.  +|.
T Consensus       319 f~~d~~tG~  327 (345)
T PF10282_consen  319 FDIDPDTGK  327 (345)
T ss_dssp             EEEETTTTE
T ss_pred             EEEeCCCCc
Confidence            9874  554

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.46  E-value=5.3e-11  Score=90.83  Aligned_cols=174  Identities=11%  Similarity=0.083  Sum_probs=109.9

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCC---CcEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTD---SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d---~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .|.++|.+ ... .+.+..+...+....|+|++ .|+..+.+   ..|.+||+.+++... +....+.+....|+|+|+.
T Consensus       180 ~l~~~d~~-g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~  256 (430)
T PRK00178        180 TLQRSDYD-GAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSK  256 (430)
T ss_pred             EEEEECCC-CCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCE
Confidence            47777776 333 34555577889999999865 46554432   368999998776533 3223344567899999998


Q ss_pred             EE-EecCCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CC--eEEEEEcCCCC
Q psy10662         90 VA-CGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSK  163 (221)
Q Consensus        90 l~-~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~  163 (221)
                      ++ +...++  .|.+||+.+++...              +..+........|+|+|+.|+..+. ++  .|+++|+.+++
T Consensus       257 la~~~~~~g~~~Iy~~d~~~~~~~~--------------lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~  322 (430)
T PRK00178        257 LAFVLSKDGNPEIYVMDLASRQLSR--------------VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR  322 (430)
T ss_pred             EEEEEccCCCceEEEEECCCCCeEE--------------cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            76 444444  58888888765421              1223334456789999998766553 33  57777776554


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CC--eEEEEECCccc
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QG--IIKIYVIPIRV  220 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iw~~~~~~  220 (221)
                      .. .+.+.             +  .......|+|+|++|+..+. ++  .|.+||+.+++
T Consensus       323 ~~-~lt~~-------------~--~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~  366 (430)
T PRK00178        323 AE-RVTFV-------------G--NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS  366 (430)
T ss_pred             EE-EeecC-------------C--CCccceEECCCCCEEEEEEccCCceEEEEEECCCCC
Confidence            32 11110             1  11235689999999987664 33  58888988764

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.46  E-value=6.1e-11  Score=90.51  Aligned_cols=184  Identities=11%  Similarity=0.033  Sum_probs=113.0

Q ss_pred             CCCceEEEEeCC---CeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EE-EecCCC--cEEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSAD---HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IV-SASTDS--QLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~-s~~~d~--~v~~wd~~~~~~~~~~~~   73 (221)
                      |||+.|+..+.+   ..|.+|++. +++.. .+....+.+...+|+|++. |+ +...++  .|.+||+.+++.. .+..
T Consensus       208 pDG~~la~~s~~~~~~~l~~~~l~-~g~~~-~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~  284 (430)
T PRK00178        208 PDGKRIAYVSFEQKRPRIFVQNLD-TGRRE-QITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTN  284 (430)
T ss_pred             CCCCEEEEEEcCCCCCEEEEEECC-CCCEE-EccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-Eccc
Confidence            789988876644   368899987 44432 2333344566789998654 54 455555  5888899877643 3444


Q ss_pred             cccceeEEEEeCCCCEEEEecC-CC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         74 HINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      +........|+|+++.++..+. ++  .|.++|+.+++... +             ...........|+|+|+.|+..+.
T Consensus       285 ~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-l-------------t~~~~~~~~~~~Spdg~~i~~~~~  350 (430)
T PRK00178        285 HPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-V-------------TFVGNYNARPRLSADGKTLVMVHR  350 (430)
T ss_pred             CCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-e-------------ecCCCCccceEECCCCCEEEEEEc
Confidence            5555667889999997765543 33  57777776665322 1             111112235689999999887664


Q ss_pred             C-C--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC---CeEEEEECCc
Q psy10662        151 N-N--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ---GIIKIYVIPI  218 (221)
Q Consensus       151 d-~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~  218 (221)
                      + +  .|.++|+.+++.. .+.            .    ........|+|||++++..+.+   ..|.++++..
T Consensus       351 ~~~~~~l~~~dl~tg~~~-~lt------------~----~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g  407 (430)
T PRK00178        351 QDGNFHVAAQDLQRGSVR-ILT------------D----TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSING  407 (430)
T ss_pred             cCCceEEEEEECCCCCEE-Ecc------------C----CCCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence            3 3  4778888765432 111            0    0011245899999998876643   3466666653

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.45  E-value=6.1e-11  Score=89.94  Aligned_cols=189  Identities=10%  Similarity=0.067  Sum_probs=109.4

Q ss_pred             CCCceEE---EEeCCC--eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEec-CCC----cEEEEEcCCC---c
Q psy10662          1 MNSCHLA---FGSADH--CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAS-TDS----QLKLWNINKP---N   66 (221)
Q Consensus         1 ~~~~~l~---~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~-~d~----~v~~wd~~~~---~   66 (221)
                      |||+.++   +...+|  .|.+.++. +++. ..+....+.....+|+|++ .|+..+ .+|    .+..|++..+   +
T Consensus       194 PDG~~~~~~y~S~~~g~~~I~~~~l~-~g~~-~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~  271 (428)
T PRK01029        194 HIGSGFPYLYVSYKLGVPKIFLGSLE-NPAG-KKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGK  271 (428)
T ss_pred             cCCCceEEEEEEccCCCceEEEEECC-CCCc-eEeecCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCc
Confidence            6776422   343443  57777876 4433 2333345556678999866 455433 223    3444776653   2


Q ss_pred             cceeeeccccceeEEEEeCCCCEEEEec-CCCeEEEE--ECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         67 CLRSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIY--YKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        67 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iw--d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                      ...............+|+|||+.|+..+ .+|...+|  ++.. +....             .+......+....|+|||
T Consensus       272 ~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~-------------~lt~~~~~~~~p~wSPDG  338 (428)
T PRK01029        272 PRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPR-------------LLTKKYRNSSCPAWSPDG  338 (428)
T ss_pred             ceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceE-------------EeccCCCCccceeECCCC
Confidence            2222222223446789999999776554 45655555  3321 11111             122333456678999999


Q ss_pred             CEEEEecCC---CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC---CCeEEEEEC
Q psy10662        143 DYVACGSEN---NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS---QGIIKIYVI  216 (221)
Q Consensus       143 ~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~  216 (221)
                      +.|+..+.+   ..|.+||+.+++.....                .....+....|+|||++|+..+.   ...|.++++
T Consensus       339 ~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt----------------~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl  402 (428)
T PRK01029        339 KKIAFCSVIKGVRQICVYDLATGRDYQLT----------------TSPENKESPSWAIDSLHLVYSAGNSNESELYLISL  402 (428)
T ss_pred             CEEEEEEcCCCCcEEEEEECCCCCeEEcc----------------CCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence            988866543   46889998776542211                11123566899999998875432   457888898


Q ss_pred             Cccc
Q psy10662        217 PIRV  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      .+++
T Consensus       403 ~~g~  406 (428)
T PRK01029        403 ITKK  406 (428)
T ss_pred             CCCC
Confidence            7764

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.44  E-value=7.9e-11  Score=89.95  Aligned_cols=184  Identities=13%  Similarity=0.067  Sum_probs=108.5

Q ss_pred             CCCceEEEEeCC-C--eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EE-EecCCCc--EEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSAD-H--CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IV-SASTDSQ--LKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~d-g--~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~-s~~~d~~--v~~wd~~~~~~~~~~~~   73 (221)
                      |||+.|+..+.+ +  .|++||+. +++. ..+....+.....+|+|++. |+ +.+.++.  |.++|+.+++.. .+..
T Consensus       227 PDG~~La~~s~~~g~~~L~~~dl~-tg~~-~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~  303 (448)
T PRK04792        227 PDGRKLAYVSFENRKAEIFVQDIY-TQVR-EKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALT-RITR  303 (448)
T ss_pred             CCCCEEEEEEecCCCcEEEEEECC-CCCe-EEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE-ECcc
Confidence            789888876543 2  58888887 4433 22332233445789998654 54 4556665  777888776543 3444


Q ss_pred             cccceeEEEEeCCCCEEEEecC-CC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         74 HINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      +........|+|+++.++..+. ++  .|.++|+.+++... +             ..........+|+|+|++|+..+.
T Consensus       304 ~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-L-------------t~~g~~~~~~~~SpDG~~l~~~~~  369 (448)
T PRK04792        304 HRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-L-------------TFEGEQNLGGSITPDGRSMIMVNR  369 (448)
T ss_pred             CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-E-------------ecCCCCCcCeeECCCCCEEEEEEe
Confidence            5555677899999998765543 33  46666776655322 1             111122234689999998877654


Q ss_pred             -CC--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CC--eEEEEECCc
Q psy10662        151 -NN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QG--IIKIYVIPI  218 (221)
Q Consensus       151 -d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iw~~~~  218 (221)
                       ++  .|.++|+.++... .+.               .. .......|+|||+.|+..+. ++  .+.+++.+.
T Consensus       370 ~~g~~~I~~~dl~~g~~~-~lt---------------~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G  426 (448)
T PRK04792        370 TNGKFNIARQDLETGAMQ-VLT---------------ST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDG  426 (448)
T ss_pred             cCCceEEEEEECCCCCeE-Ecc---------------CC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence             34  3555666655421 110               00 01123479999998877554 33  366667653

>KOG1409|consensus

Probab=99.42  E-value=4.7e-11  Score=83.86  Aligned_cols=203  Identities=12%  Similarity=0.218  Sum_probs=148.1

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEE-EeccCceEEEEEecC-CcEEEecCCCcEEEEEcC----CCccceeeecccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVF-KGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNIN----KPNCLRSFVGHIN   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~----~~~~~~~~~~~~~   76 (221)
                      ..-+++.+.|.+++||--.+.++.-..+ .....+++++.+.++ ..|+.+-.+|++.-+.+.    .....+....|..
T Consensus        36 e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~  115 (404)
T KOG1409|consen   36 EEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQA  115 (404)
T ss_pred             CCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhc
Confidence            3457788999999999765444433333 234578899999875 458888889999888764    3344555667888


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeE----------------------------EEEeecccceeEeeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH----------------------------AYRFDTVRSMLESSFVG  128 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~  128 (221)
                      .+..+-|+.....+++.+.|..+.-.-.+.+..+.                            .++........+.++.+
T Consensus       116 ~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~  195 (404)
T KOG1409|consen  116 RVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNG  195 (404)
T ss_pred             ceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcC
Confidence            89999888777788888877665433333332222                            22234444556677889


Q ss_pred             eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       129 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      |...+.+.+|.|....+.+|..|..+.+||+.-...+..              .+.+|...|..++.-+.-+.|.+++.|
T Consensus       196 h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~--------------el~gh~~kV~~l~~~~~t~~l~S~~ed  261 (404)
T KOG1409|consen  196 HTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAY--------------ELQGHNDKVQALSYAQHTRQLISCGED  261 (404)
T ss_pred             cccceEEEEEcCCCcEEEeccccCceEEEeccCCcceee--------------eeccchhhhhhhhhhhhheeeeeccCC
Confidence            999999999999999999999999999999865443321              123677888888888888999999999


Q ss_pred             CeEEEEECCcc
Q psy10662        209 GIIKIYVIPIR  219 (221)
Q Consensus       209 g~i~iw~~~~~  219 (221)
                      |.|.+|+....
T Consensus       262 g~i~~w~mn~~  272 (404)
T KOG1409|consen  262 GGIVVWNMNVK  272 (404)
T ss_pred             CeEEEEeccce
Confidence            99999998743

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.42  E-value=7.4e-10  Score=92.26  Aligned_cols=213  Identities=14%  Similarity=0.055  Sum_probs=127.9

Q ss_pred             CCceEEEEe-CCCeEEEEEecCCceeeEEEEec-----------------cCceEEEEEec-CCc-EEEecCCCcEEEEE
Q psy10662          2 NSCHLAFGS-ADHCVHYYDLRNTKEALAVFKGH-----------------RKAVSYVKFLN-KED-IVSASTDSQLKLWN   61 (221)
Q Consensus         2 ~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~-----------------~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd   61 (221)
                      +++.|.++. ..+.|+++|+. ++ .+.++.+.                 -.....++++| ++. +++.+.++.|++||
T Consensus       634 ~gn~LYVaDt~n~~Ir~id~~-~~-~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d  711 (1057)
T PLN02919        634 KKNLLYVADTENHALREIDFV-NE-TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYN  711 (1057)
T ss_pred             CCCEEEEEeCCCceEEEEecC-CC-EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEE
Confidence            445444443 34678888876 33 23333210                 01246789987 554 56667789999999


Q ss_pred             cCCCccceeeec---------------cccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEee
Q psy10662         62 INKPNCLRSFVG---------------HINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESS  125 (221)
Q Consensus        62 ~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~  125 (221)
                      ..++... .+.+               .-.....++++|+++ ++++-+.++.|++||+.++........+.........
T Consensus       712 ~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~  790 (1057)
T PLN02919        712 ISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFK  790 (1057)
T ss_pred             CCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCccccc
Confidence            8765432 1110               112356799999998 4566677899999999876532111000000000000


Q ss_pred             EE--------EeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccc-ccccccccccceeEEEEc
Q psy10662        126 FV--------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE-RDRNEDDTNEFVSAVCWR  196 (221)
Q Consensus       126 ~~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~  196 (221)
                      +.        ..-.....++++++|+++++-..++.|++||..++.......   .+.... .-....+.-.....++++
T Consensus       791 fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG---~G~~G~~dG~~~~a~l~~P~GIavd  867 (1057)
T PLN02919        791 FGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAG---TGKAGFKDGKALKAQLSEPAGLALG  867 (1057)
T ss_pred             ccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEec---cCCcCCCCCcccccccCCceEEEEe
Confidence            00        011234688999999998988899999999988765432221   000000 000011222356789999


Q ss_pred             CCCcEEEEecCCCeEEEEECCccc
Q psy10662        197 QLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       197 ~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++|+++++-+.++.|++||+.+++
T Consensus       868 ~dG~lyVaDt~Nn~Irvid~~~~~  891 (1057)
T PLN02919        868 ENGRLFVADTNNSLIRYLDLNKGE  891 (1057)
T ss_pred             CCCCEEEEECCCCEEEEEECCCCc
Confidence            999999998899999999998865

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.42  E-value=1.4e-10  Score=88.59  Aligned_cols=174  Identities=12%  Similarity=0.064  Sum_probs=105.7

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecC-CC--cEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAST-DS--QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~-d~--~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .|.++|.. ... .+.+..+...+.+..|+|++. |+..+. ++  .|.+||+.+++... +....+......|+|+|+.
T Consensus       199 ~l~i~d~d-G~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~  275 (448)
T PRK04792        199 QLMIADYD-GYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKK  275 (448)
T ss_pred             EEEEEeCC-CCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCE
Confidence            56667765 222 344555677899999998654 554433 33  58889998776432 2222333457899999997


Q ss_pred             EEE-ecCCCe--EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CC--eEEEEEcCCCC
Q psy10662         90 VAC-GSENNS--LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSK  163 (221)
Q Consensus        90 l~~-~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~  163 (221)
                      |+. .+.++.  |.++|+.+++...              +..+.......+|+|||+.|+..+. ++  .|+++|+.+++
T Consensus       276 La~~~~~~g~~~Iy~~dl~tg~~~~--------------lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~  341 (448)
T PRK04792        276 LALVLSKDGQPEIYVVDIATKALTR--------------ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK  341 (448)
T ss_pred             EEEEEeCCCCeEEEEEECCCCCeEE--------------CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            754 455664  7777877665321              1223334566889999998876553 34  46666665554


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CC--eEEEEECCccc
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QG--IIKIYVIPIRV  220 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iw~~~~~~  220 (221)
                      ... +.+             .+  ......+|+|||++|+..+. ++  .|.++|+.+++
T Consensus       342 ~~~-Lt~-------------~g--~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~  385 (448)
T PRK04792        342 VSR-LTF-------------EG--EQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGA  385 (448)
T ss_pred             EEE-Eec-------------CC--CCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCC
Confidence            321 111             01  11234689999999877654 34  45556776654

>KOG3914|consensus

Probab=99.41  E-value=6.6e-12  Score=89.52  Aligned_cols=157  Identities=13%  Similarity=0.234  Sum_probs=111.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce---eeEEEEeccCceEEEEEec-CCcEE---EecCCCcEEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE---ALAVFKGHRKAVSYVKFLN-KEDIV---SASTDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~---~~~~~~~~~~~i~~~~~~~-~~~l~---s~~~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      |.+++||++..+....++++..+.+   +..... -...-+++.|.. +....   .++....+.+|....+... .+-+
T Consensus        72 ~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~-~~lG  149 (390)
T KOG3914|consen   72 DSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCE-PILG  149 (390)
T ss_pred             CCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccccCcc-hhhh
Confidence            4678899998888887888764332   222222 122334444442 22222   3455566677776654443 3458


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      |-+.+..++++||+++++++..|..|++-.......+..+            ..||..-|..++.-++ +.|++++.|++
T Consensus       150 hvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesf------------clGH~eFVS~isl~~~-~~LlS~sGD~t  216 (390)
T KOG3914|consen  150 HVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESF------------CLGHKEFVSTISLTDN-YLLLSGSGDKT  216 (390)
T ss_pred             hhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhh------------ccccHhheeeeeeccC-ceeeecCCCCc
Confidence            9999999999999999999999999999766544444333            4689999999998765 45899999999


Q ss_pred             EEEEEcCCCCceeeeeeec
Q psy10662        154 LYIYYKGLSKHMHAYRFDT  172 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~  172 (221)
                      +++||+.+++.+.++....
T Consensus       217 lr~Wd~~sgk~L~t~dl~s  235 (390)
T KOG3914|consen  217 LRLWDITSGKLLDTCDLSS  235 (390)
T ss_pred             EEEEecccCCcccccchhH
Confidence            9999999999998776544

>KOG1334|consensus

Probab=99.41  E-value=5.2e-12  Score=92.26  Aligned_cols=202  Identities=14%  Similarity=0.160  Sum_probs=140.6

Q ss_pred             CCceEEEEeCCCeEEEEEecCCcee--eEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCccceee---ecc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEA--LAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPNCLRSF---VGH   74 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~--~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~---~~~   74 (221)
                      +.+.+++++.||.|++=.+..++..  ...+..|.++|..++.-|+  ..|.+++.|+.+.-+|++...+...+   ..+
T Consensus       198 ~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~  277 (559)
T KOG1334|consen  198 GDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREAD  277 (559)
T ss_pred             CCcCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccC
Confidence            3467889999999999887655543  3455679999999998874  45999999999999999876443222   122


Q ss_pred             cc---ceeEEEEeCCCC-EEEEecCCCeEEEEECCCCee----------------------eEEEE--------------
Q psy10662         75 IN---DKNFVGLATDGD-YVACGSENNSLYIYYKGLSKH----------------------MHAYR--------------  114 (221)
Q Consensus        75 ~~---~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~----------------------~~~~~--------------  114 (221)
                      ..   ....++..|... .+++++.|..+++||.+.-..                      +..+.              
T Consensus       278 ~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnD  357 (559)
T KOG1334|consen  278 EKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYND  357 (559)
T ss_pred             CccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecc
Confidence            22   456677777655 567777777777777532111                      00110              


Q ss_pred             -----eec----------cc--ceeEe-eEEEeeC--ceEEEEE-ecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc
Q psy10662        115 -----FDT----------VR--SMLES-SFVGHIN--DKNFVGL-ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV  173 (221)
Q Consensus       115 -----~~~----------~~--~~~~~-~~~~~~~--~v~~~~~-~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~  173 (221)
                           |..          ..  .+.+. .+++|.+  .|..+-| -|...++++|+.=|.|.||+..+++.+..+.    
T Consensus       358 e~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~Me----  433 (559)
T KOG1334|consen  358 EDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFME----  433 (559)
T ss_pred             cceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhh----
Confidence                 100          00  12222 2667755  4666665 6889999999999999999998888776554    


Q ss_pred             cccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        174 RSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       174 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                                 +...-|+++.-+|.-..||+.+-|..|+||...+
T Consensus       434 -----------gDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~  467 (559)
T KOG1334|consen  434 -----------GDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT  467 (559)
T ss_pred             -----------cccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence                       3334789999999999999999999999998743

>KOG4190|consensus

Probab=99.40  E-value=8.6e-13  Score=98.27  Aligned_cols=175  Identities=17%  Similarity=0.251  Sum_probs=127.1

Q ss_pred             eeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCC-------ccceeeeccccceeEEEEeCCCCEEEEecCCC
Q psy10662         26 ALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKP-------NCLRSFVGHINDKNFVGLATDGDYVACGSENN   97 (221)
Q Consensus        26 ~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~   97 (221)
                      .+..+.+|...|..++-- +.+.+++++.|.+|++|.++..       .+..++..|+.+|..+.|-.+-++++++  ||
T Consensus       727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~  804 (1034)
T KOG4190|consen  727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG  804 (1034)
T ss_pred             eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence            345677898888888655 5677999999999999998642       3455678899999999999887777655  77


Q ss_pred             eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE-ecCCCeEEEEEcCCCCceeeeeeeccccc
Q psy10662         98 SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC-GSENNSLYIYYKGLSKHMHAYRFDTVRSM  176 (221)
Q Consensus        98 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~~~~~~~  176 (221)
                      .|++||.-.+..+....+.+.        .+..+.|.++. +-+...+++ ++...+|+++|.+..+....++....   
T Consensus       805 giHlWDPFigr~Laq~~dapk--------~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna---  872 (1034)
T KOG4190|consen  805 GIHLWDPFIGRLLAQMEDAPK--------EGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNA---  872 (1034)
T ss_pred             cceeecccccchhHhhhcCcc--------cCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEeccC---
Confidence            899999876666554322221        11122233332 113344444 47789999999998887766653221   


Q ss_pred             ccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        177 LERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       177 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                             .+.+..+++++.-+.|++++++=.+|.|.+.|.++|++
T Consensus       873 -------~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~v  910 (1034)
T KOG4190|consen  873 -------PGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKV  910 (1034)
T ss_pred             -------CCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCce
Confidence                   24456788999999999999999999999999999874

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.40  E-value=1.3e-09  Score=79.46  Aligned_cols=201  Identities=8%  Similarity=0.008  Sum_probs=122.7

Q ss_pred             CCCceEEEEeC----------CCeEEEEEecCCceeeEEEEeccC-------ceEEEEEecCCc-EEEec-C-CCcEEEE
Q psy10662          1 MNSCHLAFGSA----------DHCVHYYDLRNTKEALAVFKGHRK-------AVSYVKFLNKED-IVSAS-T-DSQLKLW   60 (221)
Q Consensus         1 ~~~~~l~~~~~----------dg~i~i~~~~~~~~~~~~~~~~~~-------~i~~~~~~~~~~-l~s~~-~-d~~v~~w   60 (221)
                      ||++.|.++..          +..|.+||.. +.+.+..+..-..       ....++++|++. |+... . +..|.+.
T Consensus        55 pDg~~lyva~~~~~R~~~G~~~d~V~v~D~~-t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~Vv  133 (352)
T TIGR02658        55 SDGSFFAHASTVYSRIARGKRTDYVEVIDPQ-THLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVV  133 (352)
T ss_pred             CCCCEEEEEeccccccccCCCCCEEEEEECc-cCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEE
Confidence            67777777665          7899999998 7777777763222       234677888655 55444 3 7899999


Q ss_pred             EcCCCccceeeecccc-------------------------------ceeEE--------------EEeC-CCCEEEEec
Q psy10662         61 NINKPNCLRSFVGHIN-------------------------------DKNFV--------------GLAT-DGDYVACGS   94 (221)
Q Consensus        61 d~~~~~~~~~~~~~~~-------------------------------~v~~~--------------~~~~-~~~~l~~~~   94 (221)
                      |+.+++.+.++.....                               .....              .|.+ ++++++...
T Consensus       134 D~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~  213 (352)
T TIGR02658       134 DLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTY  213 (352)
T ss_pred             ECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEec
Confidence            9988766654421000                               00110              1122 555555554


Q ss_pred             CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec----------CCCeEEEEEcCCCCc
Q psy10662         95 ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS----------ENNSLYIYYKGLSKH  164 (221)
Q Consensus        95 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~~~  164 (221)
                      + |.|.+.|+...+......|........ .-.-......-++++|+++.+.+..          ..+.|.++|..+.+.
T Consensus       214 e-G~V~~id~~~~~~~~~~~~~~~~~~~~-~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kv  291 (352)
T TIGR02658       214 T-GKIFQIDLSSGDAKFLPAIEAFTEAEK-ADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKR  291 (352)
T ss_pred             C-CeEEEEecCCCcceecceeeecccccc-ccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeE
Confidence            4 777777754332211111111000000 0001122333499999999887742          225799999999888


Q ss_pred             eeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEec-CCCeEEEEECCccc
Q psy10662        165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~iw~~~~~~  220 (221)
                      +..+.                -...+..++++||++ +|++.+ .++.|.++|+.+++
T Consensus       292 i~~i~----------------vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k  333 (352)
T TIGR02658       292 LRKIE----------------LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGK  333 (352)
T ss_pred             EEEEe----------------CCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCe
Confidence            77664                233678999999999 888776 58889999998875

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.39  E-value=2e-12  Score=89.80  Aligned_cols=206  Identities=13%  Similarity=0.194  Sum_probs=131.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc----eeeEEEEecc------------CceEEEEEe-cC--CcEEEecCCCcEEEEEc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK----EALAVFKGHR------------KAVSYVKFL-NK--EDIVSASTDSQLKLWNI   62 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~------------~~i~~~~~~-~~--~~l~s~~~d~~v~~wd~   62 (221)
                      .|.+|++|...|.|.+|.-++..    +....+++|.            ..|..+.|. +.  ..++..+.|.+|++|.+
T Consensus        37 tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstNdktiKlWKi  116 (460)
T COG5170          37 TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTNDKTIKLWKI  116 (460)
T ss_pred             ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecCCceeeeeee
Confidence            36899999999999999876433    2233456554            368889998 43  34778889999999987


Q ss_pred             CCCc-------------------cc-----------------------eee-eccccceeEEEEeCCCCEEEEecCCCeE
Q psy10662         63 NKPN-------------------CL-----------------------RSF-VGHINDKNFVGLATDGDYVACGSENNSL   99 (221)
Q Consensus        63 ~~~~-------------------~~-----------------------~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v   99 (221)
                      ....                   ++                       +.+ ..|.--++++.|+.+...++++ .|-.|
T Consensus       117 yeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et~lSa-DdLrI  195 (460)
T COG5170         117 YEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKETLLSA-DDLRI  195 (460)
T ss_pred             ecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchheeeec-cceee
Confidence            5320                   00                       001 2455668899999888877766 56789


Q ss_pred             EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEecCCCeEEEEEcCCCCce------eeeeeec
Q psy10662        100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHM------HAYRFDT  172 (221)
Q Consensus       100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~------~~~~~~~  172 (221)
                      .+|++.....-..+- +.    ....+......|++..|+|. .+.+.-.+..|.|++-|++....-      .....+.
T Consensus       196 NLWnl~i~D~sFnIV-Di----KP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~  270 (460)
T COG5170         196 NLWNLEIIDGSFNIV-DI----KPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDG  270 (460)
T ss_pred             eeccccccCCceEEE-ec----cCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCc
Confidence            999876443322210 00    00011122345788899994 456777888999999999854321      1111111


Q ss_pred             ccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        173 VRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       173 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .     ....+.+-...|..+.|+++|+++++-+. -++++||+...
T Consensus       271 v-----~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~  311 (460)
T COG5170         271 V-----DVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMA  311 (460)
T ss_pred             c-----cchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccc
Confidence            0     01112233456889999999999999765 47999999764

>KOG0280|consensus

Probab=99.36  E-value=2.2e-10  Score=78.96  Aligned_cols=165  Identities=12%  Similarity=0.077  Sum_probs=111.3

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEec---cC---ceEEEEEec-CCcEEEecCCCcEEEEEcCCCc--cceeeeccc
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGH---RK---AVSYVKFLN-KEDIVSASTDSQLKLWNINKPN--CLRSFVGHI   75 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~---~~---~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~~   75 (221)
                      .|+-+..+|.|.+|... .......+++-   +-   ...++.|++ +..+++.-.+|.+.+-+.....  .++..+.|.
T Consensus        87 ~l~~a~a~G~i~~~r~~-~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He  165 (339)
T KOG0280|consen   87 NLLDAHARGQIQLYRND-EDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHE  165 (339)
T ss_pred             eeeeccccceEEEEeec-cceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccc
Confidence            45566667888888765 22222222221   11   234566776 4458888889999866554443  344678899


Q ss_pred             cceeEEEEeCCC-CEEEEecCCCeEEEEECCCCe-eeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCC
Q psy10662         76 NDKNFVGLATDG-DYVACGSENNSLYIYYKGLSK-HMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENN  152 (221)
Q Consensus        76 ~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~  152 (221)
                      -+++...|+... +++.+|++|+.+..||++..+ .+.            +...-|...|.++.-+| .+.+|++|+.|-
T Consensus       166 ~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~------------~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe  233 (339)
T KOG0280|consen  166 FEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW------------HNSKVHTSGVVSIYSSPPKPTYIATGSYDE  233 (339)
T ss_pred             eeeeeeecccCCCceEEecCCCceEEEEEecCCcceee------------ecceeeecceEEEecCCCCCceEEEecccc
Confidence            999999997543 578999999999999999433 221            12356778888888765 678999999999


Q ss_pred             eEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCC
Q psy10662        153 SLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL  198 (221)
Q Consensus       153 ~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  198 (221)
                      .|++||.++ ++++..-                .-.+.|..+.++|.
T Consensus       234 ~i~~~DtRnm~kPl~~~----------------~v~GGVWRi~~~p~  264 (339)
T KOG0280|consen  234 CIRVLDTRNMGKPLFKA----------------KVGGGVWRIKHHPE  264 (339)
T ss_pred             ceeeeehhcccCccccC----------------ccccceEEEEecch
Confidence            999999873 4433221                12356888888874

>KOG3914|consensus

Probab=99.36  E-value=2.2e-11  Score=86.89  Aligned_cols=151  Identities=11%  Similarity=0.162  Sum_probs=98.3

Q ss_pred             EEEecCCc-EEEecCCCcEEEEEcCCCcc----ceeeeccccceeEEEEeCCCCEEEEe---cCCCeEEEEECCCCeeeE
Q psy10662         40 VKFLNKED-IVSASTDSQLKLWNINKPNC----LRSFVGHINDKNFVGLATDGDYVACG---SENNSLYIYYKGLSKHMH  111 (221)
Q Consensus        40 ~~~~~~~~-l~s~~~d~~v~~wd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d~~v~iwd~~~~~~~~  111 (221)
                      +..+|++. ++.+..+....++++.....    +.... -...-+.+.|..+......+   ++...+.+|....+... 
T Consensus        68 ~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~-  145 (390)
T KOG3914|consen   68 VLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCE-  145 (390)
T ss_pred             cccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccccCcc-
Confidence            33455555 44555555555777654332    22221 22233445554444444433   33444555544433222 


Q ss_pred             EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccccee
Q psy10662        112 AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVS  191 (221)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  191 (221)
                                   .+.+|-..++.++|+||+++|+++..|..|++-.......+..+.              -+|...|.
T Consensus       146 -------------~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfc--------------lGH~eFVS  198 (390)
T KOG3914|consen  146 -------------PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFC--------------LGHKEFVS  198 (390)
T ss_pred             -------------hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhc--------------cccHhhee
Confidence                         246899999999999999999999999999997665444333332              37999999


Q ss_pred             EEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        192 AVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .++.-++ ..|+++|.|+++++||+.+|+
T Consensus       199 ~isl~~~-~~LlS~sGD~tlr~Wd~~sgk  226 (390)
T KOG3914|consen  199 TISLTDN-YLLLSGSGDKTLRLWDITSGK  226 (390)
T ss_pred             eeeeccC-ceeeecCCCCcEEEEecccCC
Confidence            9998765 569999999999999999886

>KOG4714|consensus

Probab=99.36  E-value=8.6e-12  Score=84.40  Aligned_cols=199  Identities=11%  Similarity=0.074  Sum_probs=116.9

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCC------CcEEEEEcCCCccceeeecccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTD------SQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d------~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      ++.++++..||.+.+++.++..+....+..-...-.+.++...+.++.+..=      +..+.|+++..+....-.....
T Consensus       101 ~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~  180 (319)
T KOG4714|consen  101 DNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALD  180 (319)
T ss_pred             CCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccccc
Confidence            4678999999999999987422222222211111122222223334433333      3455666654332221111223


Q ss_pred             ceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeE
Q psy10662         77 DKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSL  154 (221)
Q Consensus        77 ~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i  154 (221)
                      .|.+++-+|..+ .+++|+.||.+.+||.+....+.            ..+..|+.++..+-|+| ++..|+++++||.+
T Consensus       181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~------------S~l~ahk~~i~eV~FHpk~p~~Lft~sedGsl  248 (319)
T KOG4714|consen  181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPV------------SLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSL  248 (319)
T ss_pred             cchhhhCCcccccEEEEecCCCeEEEEEcccccchH------------HHHHHhhhhhhheeccCCCchheeEecCCCcE
Confidence            489999998765 56888899999999998764332            23678999999999998 67789999999999


Q ss_pred             EEEEcCCCCceeeeeee---------cccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        155 YIYYKGLSKHMHAYRFD---------TVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      -.||..+.-.--..+.+         +.+........+......|+++.  --|..|++|+.-+.|++++
T Consensus       249 w~wdas~~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfD--V~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  249 WHWDASTTFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFD--VLGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             EEEcCCCceEEecCccccccccccCCcccceEeeeccccccceeeeeee--ccCceEEeccccceEEEec
Confidence            99997742111000000         00010111111112222344443  3588999999999998875

>KOG4547|consensus

Probab=99.35  E-value=5.2e-10  Score=83.63  Aligned_cols=144  Identities=15%  Similarity=0.167  Sum_probs=120.3

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      |-..++-|...|.|.+|++. .++.-..+.  .|.+.|.++.++. -+.|.+++.|+.+..|+....+.++.....+..+
T Consensus        69 ~t~~lvlgt~~g~v~~ys~~-~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~  147 (541)
T KOG4547|consen   69 DTSMLVLGTPQGSVLLYSVA-GGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLV  147 (541)
T ss_pred             CceEEEeecCCccEEEEEec-CCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCcc
Confidence            34578889899999999998 677666665  6889999999885 5679999999999999999999998888888889


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-----CCEEEEe-cCCC
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-----GDYVACG-SENN  152 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~-~~d~  152 (221)
                      .+++.+||+..+++++.  .|++||+++.+.+..|             .+|.++|.++.|--+     |.+++++ ..+.
T Consensus       148 ~sl~is~D~~~l~~as~--~ik~~~~~~kevv~~f-------------tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r  212 (541)
T KOG4547|consen  148 SSLCISPDGKILLTASR--QIKVLDIETKEVVITF-------------TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAER  212 (541)
T ss_pred             ceEEEcCCCCEEEeccc--eEEEEEccCceEEEEe-------------cCCCcceEEEEEEEeccccccceeeecccccc
Confidence            99999999999988864  6999999999888765             899999999999766     6666544 4556


Q ss_pred             eEEEEEcCC
Q psy10662        153 SLYIYYKGL  161 (221)
Q Consensus       153 ~i~~~d~~~  161 (221)
                      .+.+|-.+.
T Consensus       213 ~i~~w~v~~  221 (541)
T KOG4547|consen  213 GITVWVVEK  221 (541)
T ss_pred             ceeEEEEEc
Confidence            688886654

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.34  E-value=7.1e-10  Score=81.43  Aligned_cols=184  Identities=16%  Similarity=0.222  Sum_probs=129.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEE-------ecc-----CceEEEE-Ee--cCCcEEEecCCCcEEEEEcCCCc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFK-------GHR-----KAVSYVK-FL--NKEDIVSASTDSQLKLWNINKPN   66 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-------~~~-----~~i~~~~-~~--~~~~l~s~~~d~~v~~wd~~~~~   66 (221)
                      ||+.++-. ..|.|.+||.++..  +..+.       ..+     .+..-+. |+  ++.+++..| -|...+.+...+-
T Consensus       277 DGkrIvFq-~~GdIylydP~td~--lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VS-RGkaFi~~~~~~~  352 (668)
T COG4946         277 DGKRIVFQ-NAGDIYLYDPETDS--LEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVS-RGKAFIMRPWDGY  352 (668)
T ss_pred             CCcEEEEe-cCCcEEEeCCCcCc--ceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEe-cCcEEEECCCCCe
Confidence            67777664 67899999987322  11111       001     1111122 33  456666655 4566666654444


Q ss_pred             cceeeeccccceeEEEEeCCCCEEEEecCCC-eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE
Q psy10662         67 CLRSFVGHINDKNFVGLATDGDYVACGSENN-SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV  145 (221)
Q Consensus        67 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  145 (221)
                      .++  .++...|.-..+..+.+-++.|..|| .+-|+|.++++..+              +.+.-+.|.++..+|+|+++
T Consensus       353 ~iq--v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr--------------~e~~lg~I~av~vs~dGK~~  416 (668)
T COG4946         353 SIQ--VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKR--------------IEKDLGNIEAVKVSPDGKKV  416 (668)
T ss_pred             eEE--cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEE--------------eeCCccceEEEEEcCCCcEE
Confidence            333  35777788888888888889999998 89999998887532              34556789999999999999


Q ss_pred             EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC----eEEEEECCccc
Q psy10662        146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG----IIKIYVIPIRV  220 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iw~~~~~~  220 (221)
                      +++.....+.+.|+.++.....-+               ....-|+.+.|||+++++|-+--+|    .|+++|+.+++
T Consensus       417 vvaNdr~el~vididngnv~~idk---------------S~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K  480 (668)
T COG4946         417 VVANDRFELWVIDIDNGNVRLIDK---------------SEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK  480 (668)
T ss_pred             EEEcCceEEEEEEecCCCeeEecc---------------cccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCe
Confidence            999999999999999887532221               2355799999999999999876554    78999998876

>KOG2315|consensus

Probab=99.32  E-value=6.1e-10  Score=82.92  Aligned_cols=132  Identities=12%  Similarity=0.071  Sum_probs=95.8

Q ss_pred             CcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEE--ecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc
Q psy10662         55 SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVAC--GSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND  132 (221)
Q Consensus        55 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (221)
                      .++++.+++.......+ ...++|.++.|+|++.-+++  |-.-..+.|+|++- +++.               .-..++
T Consensus       251 q~Lyll~t~g~s~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~~v~---------------df~egp  313 (566)
T KOG2315|consen  251 QTLYLLATQGESVSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-KPVF---------------DFPEGP  313 (566)
T ss_pred             ceEEEEEecCceEEEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC-CEeE---------------eCCCCC
Confidence            35788887743444333 34789999999999986544  44566899999763 3332               223456


Q ss_pred             eEEEEEecCCCEEEEecCC---CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC--
Q psy10662        133 KNFVGLATDGDYVACGSEN---NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS--  207 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--  207 (221)
                      -+++-|+|.|++|+.+|.+   |.|-+||..+.+.+..+..                 ..-+-+.|+|||++++|++.  
T Consensus       314 RN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a-----------------~~tt~~eW~PdGe~flTATTaP  376 (566)
T KOG2315|consen  314 RNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA-----------------ANTTVFEWSPDGEYFLTATTAP  376 (566)
T ss_pred             ccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc-----------------CCceEEEEcCCCcEEEEEeccc
Confidence            6788899999999888764   7899999988776655531                 12355899999999999874  


Q ss_pred             ----CCeEEEEECCccc
Q psy10662        208 ----QGIIKIYVIPIRV  220 (221)
Q Consensus       208 ----dg~i~iw~~~~~~  220 (221)
                          |+.++||+.....
T Consensus       377 RlrvdNg~KiwhytG~~  393 (566)
T KOG2315|consen  377 RLRVDNGIKIWHYTGSL  393 (566)
T ss_pred             cEEecCCeEEEEecCce
Confidence                7889999987543

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.30  E-value=1.1e-08  Score=75.81  Aligned_cols=200  Identities=9%  Similarity=0.096  Sum_probs=117.8

Q ss_pred             EEEEeCC----CeEEEEEecCCceeeEEEE--eccCceEEEEEecC-CcEEEecC----CCcEEEEEcCCC--c--ccee
Q psy10662          6 LAFGSAD----HCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNK-EDIVSAST----DSQLKLWNINKP--N--CLRS   70 (221)
Q Consensus         6 l~~~~~d----g~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~l~s~~~----d~~v~~wd~~~~--~--~~~~   70 (221)
                      +.+|+..    +.|.+|+++.....+....  ........++++|+ +.|.++..    ++.|..|++...  +  .+..
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~   81 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS   81 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeee
Confidence            4455555    7999999943322222222  23455677888875 44666554    578999988764  2  2233


Q ss_pred             eeccccceeEEEEeCCCCEEEEec-CCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe
Q psy10662         71 FVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG  148 (221)
Q Consensus        71 ~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  148 (221)
                      ..........++++|++++++++. .+|.|.++++... ........-.....-............++.|+|+++++++.
T Consensus        82 ~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~  161 (345)
T PF10282_consen   82 VPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVP  161 (345)
T ss_dssp             EEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEE
T ss_pred             eccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEE
Confidence            332334557899999999887775 5899999999874 33222100000000000000112346789999999988776


Q ss_pred             cC-CCeEEEEEcCCCCc-eee-eeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECC
Q psy10662        149 SE-NNSLYIYYKGLSKH-MHA-YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIP  217 (221)
Q Consensus       149 ~~-d~~i~~~d~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~  217 (221)
                      .. ...|.+|++..... +.. -...            .......+.+.|+|++++++... .++.|.++++.
T Consensus       162 dlG~D~v~~~~~~~~~~~l~~~~~~~------------~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~  222 (345)
T PF10282_consen  162 DLGADRVYVYDIDDDTGKLTPVDSIK------------VPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD  222 (345)
T ss_dssp             ETTTTEEEEEEE-TTS-TEEEEEEEE------------CSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred             ecCCCEEEEEEEeCCCceEEEeeccc------------cccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence            53 45799999876552 111 1100            02234568899999999887766 48899999887

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.30  E-value=3.1e-08  Score=68.45  Aligned_cols=206  Identities=10%  Similarity=0.048  Sum_probs=121.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccC---ceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeeec--
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRK---AVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVG--   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~---~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~--   73 (221)
                      +||++||.- .|..|.|-..+... ..+...+..++   .=.-++|+|++. |+.+...|+|++||+.. ..+..+..  
T Consensus         7 ~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I~p~~   84 (282)
T PF15492_consen    7 SDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVIPPAM   84 (282)
T ss_pred             CCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEcCccc
Confidence            367777765 66677776554222 22233333333   357899998765 66778899999999864 33333321  


Q ss_pred             -----cccceeEEEEeCCC------CEEEEecCCCeEEEEECCC-----CeeeEEEEeecccceeEeeEE-EeeCceEEE
Q psy10662         74 -----HINDKNFVGLATDG------DYVACGSENNSLYIYYKGL-----SKHMHAYRFDTVRSMLESSFV-GHINDKNFV  136 (221)
Q Consensus        74 -----~~~~v~~~~~~~~~------~~l~~~~~d~~v~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~  136 (221)
                           ....|..+.|.+..      ..|++-..+|.++=|-+..     .+...++           .+. .....|.++
T Consensus        85 ~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsf-----------sf~~~yp~Gi~~~  153 (282)
T PF15492_consen   85 SFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSF-----------SFSSHYPHGINSA  153 (282)
T ss_pred             ccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEE-----------EecccCCCceeEE
Confidence                 12456667675432      1355555677676665422     1222222           222 236689999


Q ss_pred             EEecCCCEEEEecCC-----------CeEEEEEcCCCCceeeeeeecccc--------ccccccc------cccccccee
Q psy10662        137 GLATDGDYVACGSEN-----------NSLYIYYKGLSKHMHAYRFDTVRS--------MLERDRN------EDDTNEFVS  191 (221)
Q Consensus       137 ~~~~~~~~l~~~~~d-----------~~i~~~d~~~~~~~~~~~~~~~~~--------~~~~~~~------~~~~~~~v~  191 (221)
                      .++|..++|++|+..           .-+.-|.+-++.+-..........        ...++..      .......|.
T Consensus       154 vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~  233 (282)
T PF15492_consen  154 VYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIF  233 (282)
T ss_pred             EEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceE
Confidence            999998888777632           135667655444322211110000        0000111      112356789


Q ss_pred             EEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        192 AVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .+..||||+.|++...+|.|.+|++++-
T Consensus       234 kmSlSPdg~~La~ih~sG~lsLW~iPsL  261 (282)
T PF15492_consen  234 KMSLSPDGSLLACIHFSGSLSLWEIPSL  261 (282)
T ss_pred             EEEECCCCCEEEEEEcCCeEEEEecCcc
Confidence            9999999999999999999999999863

>KOG4190|consensus

Probab=99.30  E-value=2.2e-11  Score=90.98  Aligned_cols=157  Identities=14%  Similarity=0.208  Sum_probs=115.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc------eeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeee--
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK------EALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFV--   72 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~--   72 (221)
                      +.+-+++++.|.+|++|.++..+      .+..+++.|+.+|.++.|..+. .++  +.||.|.+||.--++.+....  
T Consensus       746 NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~--ScD~giHlWDPFigr~Laq~~da  823 (1034)
T KOG4190|consen  746 NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIA--SCDGGIHLWDPFIGRLLAQMEDA  823 (1034)
T ss_pred             cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceee--eccCcceeecccccchhHhhhcC
Confidence            45778999999999999997543      3566788999999999998544 344  458999999987776665332  


Q ss_pred             ccccceeEEEEeCC--CCEEEE-ecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662         73 GHINDKNFVGLATD--GDYVAC-GSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        73 ~~~~~v~~~~~~~~--~~~l~~-~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                      ...+.+..+..-|+  ...+++ ++...+|+++|.+..+...+++.        ..-.+.+..+.+++..|.|++++++-
T Consensus       824 pk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kV--------cna~~Pna~~R~iaVa~~GN~lAa~L  895 (1034)
T KOG4190|consen  824 PKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKV--------CNAPGPNALTRAIAVADKGNKLAAAL  895 (1034)
T ss_pred             cccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEe--------ccCCCCchheeEEEeccCcchhhHHh
Confidence            11233344444343  334444 47788999999998887766522        11234456788999999999999999


Q ss_pred             CCCeEEEEEcCCCCceeee
Q psy10662        150 ENNSLYIYYKGLSKHMHAY  168 (221)
Q Consensus       150 ~d~~i~~~d~~~~~~~~~~  168 (221)
                      ..|.|.+.|.++++.+..+
T Consensus       896 SnGci~~LDaR~G~vINsw  914 (1034)
T KOG4190|consen  896 SNGCIAILDARNGKVINSW  914 (1034)
T ss_pred             cCCcEEEEecCCCceeccC
Confidence            9999999999999877655

>KOG1064|consensus

Probab=99.29  E-value=3.6e-11  Score=100.14  Aligned_cols=159  Identities=11%  Similarity=0.135  Sum_probs=122.4

Q ss_pred             ccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeee-ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeee
Q psy10662         33 HRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFV-GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHM  110 (221)
Q Consensus        33 ~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~  110 (221)
                      +-..|.++.-+| .-..++|+.||.+++|....++.+..++ .....|+.+.|+.+|+.+..+..||.+.+|... .++.
T Consensus      2207 ~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~ 2285 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPY 2285 (2439)
T ss_pred             ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccce
Confidence            445677777777 5668999999999999998888877763 234789999999999999999999999999876 2222


Q ss_pred             EEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec---CCCeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662        111 HAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS---ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN  187 (221)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (221)
                                   ...+.|+.....+.|-.  ..+++++   .++.+.+||........            .+.  ..|.
T Consensus      2286 -------------~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s------------~v~--~~H~ 2336 (2439)
T KOG1064|consen 2286 -------------TSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNS------------LVH--TCHD 2336 (2439)
T ss_pred             -------------eccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccc------------eee--eecC
Confidence                         23466777777777765  4566654   46889999964322111            111  4788


Q ss_pred             cceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        188 EFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       188 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      ..++.+++-|..++|++|+.+|.|++||++.++|
T Consensus      2337 ~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql 2370 (2439)
T KOG1064|consen 2337 GGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQL 2370 (2439)
T ss_pred             CCceEEEEcCcceEEEecCCcCcEEEeehHHHHH
Confidence            8999999999999999999999999999987764

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.28  E-value=4.4e-08  Score=71.67  Aligned_cols=201  Identities=5%  Similarity=-0.058  Sum_probs=122.4

Q ss_pred             CeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E-EEec---------CCCcEEEEEcCCCccceeeecccc-----
Q psy10662         13 HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I-VSAS---------TDSQLKLWNINKPNCLRSFVGHIN-----   76 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~---------~d~~v~~wd~~~~~~~~~~~~~~~-----   76 (221)
                      +.|.+.|.. +.+.+..+..-..+- .+ ++|++. + ++.+         .+..|.+||..+.+.+..+.-...     
T Consensus        27 ~~v~ViD~~-~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~  103 (352)
T TIGR02658        27 TQVYTIDGE-AGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLV  103 (352)
T ss_pred             ceEEEEECC-CCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhc
Confidence            899999998 778888877544433 34 787544 4 4455         689999999999999887753222     


Q ss_pred             --ceeEEEEeCCCCEEEEec-C-CCeEEEEECCCCeeeEEEEeeccc----------------ceeEe-eE------EEe
Q psy10662         77 --DKNFVGLATDGDYVACGS-E-NNSLYIYYKGLSKHMHAYRFDTVR----------------SMLES-SF------VGH  129 (221)
Q Consensus        77 --~v~~~~~~~~~~~l~~~~-~-d~~v~iwd~~~~~~~~~~~~~~~~----------------~~~~~-~~------~~~  129 (221)
                        ....++++|+|++++... . +..|.+.|+.+++.+.++......                ..... .+      ...
T Consensus       104 ~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~  183 (352)
T TIGR02658       104 GTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIK  183 (352)
T ss_pred             cCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEe
Confidence              234789999999887655 3 789999999999998877521100                00000 00      000


Q ss_pred             eCceE---------EEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC
Q psy10662        130 INDKN---------FVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       130 ~~~v~---------~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  199 (221)
                      ...+.         .-.|.+ +|+++.+..+ |.|++.|+..........+.......   ....-......-++++|++
T Consensus       184 ~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~---~~~~wrP~g~q~ia~~~dg  259 (352)
T TIGR02658       184 PTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAE---KADGWRPGGWQQVAYHRAR  259 (352)
T ss_pred             eeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccc---cccccCCCcceeEEEcCCC
Confidence            00110         002344 7888877776 99999997554432222111100000   0000122233449999999


Q ss_pred             cEEEEec----------CCCeEEEEECCccc
Q psy10662        200 RVLVAAN----------SQGIIKIYVIPIRV  220 (221)
Q Consensus       200 ~~l~~~~----------~dg~i~iw~~~~~~  220 (221)
                      +.++...          ..+.|.++|..+++
T Consensus       260 ~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k  290 (352)
T TIGR02658       260 DRIYLLADQRAKWTHKTASRFLFVVDAKTGK  290 (352)
T ss_pred             CEEEEEecCCccccccCCCCEEEEEECCCCe
Confidence            9888843          22579999998876

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.28  E-value=6.1e-09  Score=73.20  Aligned_cols=194  Identities=15%  Similarity=0.107  Sum_probs=120.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee-ecccc---c
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF-VGHIN---D   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~---~   77 (221)
                      ++..+++++.++.|..||.. +++.+..... .+.+.......++.++.++.++.+..+|..+++.+... .....   .
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~-tG~~~W~~~~-~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~  112 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAK-TGKVLWRFDL-PGPISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGV  112 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETT-TSEEEEEEEC-SSCGGSGEEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCST
T ss_pred             eCCEEEEEcCCCEEEEEECC-CCCEEEEeec-cccccceeeecccccccccceeeeEecccCCcceeeeecccccccccc
Confidence            46677788899999999997 7888777764 33322222334677777778889999999999988774 32211   1


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe-EEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS-LYI  156 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~  156 (221)
                      .........++.++.+..++.|..+|+++++.+............  .+. ....+..-....++ .+..++.++. +.+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~-~v~~~~~~g~~~~~  188 (238)
T PF13360_consen  113 RSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSS--PIS-SFSDINGSPVISDG-RVYVSSGDGRVVAV  188 (238)
T ss_dssp             B--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS----EE-EETTEEEEEECCTT-EEEEECCTSSEEEE
T ss_pred             ccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCc--cee-eecccccceEEECC-EEEEEcCCCeEEEE
Confidence            122223334778888888999999999999998876442211100  000 11112222222244 6666666664 555


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                       |+.+++.+-  ...               ...+.. ....++..|+.++.++.+..||+.+|+
T Consensus       189 -d~~tg~~~w--~~~---------------~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~tG~  233 (238)
T PF13360_consen  189 -DLATGEKLW--SKP---------------ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKTGK  233 (238)
T ss_dssp             -ETTTTEEEE--EEC---------------SS-ECE-CEECCCTEEEEEETTTEEEEEETTTTE
T ss_pred             -ECCCCCEEE--Eec---------------CCCccC-CceeeCCEEEEEeCCCEEEEEECCCCC
Confidence             988887442  110               111222 134577788887799999999999986

...

>KOG2695|consensus

Probab=99.28  E-value=2.4e-11  Score=85.39  Aligned_cols=150  Identities=9%  Similarity=0.133  Sum_probs=111.9

Q ss_pred             EEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCC-----ccceeeeccccceeEE
Q psy10662          8 FGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKP-----NCLRSFVGHINDKNFV   81 (221)
Q Consensus         8 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~-----~~~~~~~~~~~~v~~~   81 (221)
                      +.+.+-.|-+-|++ ++ ..+.|. .++.|.++.|.. +..++.|+.+|.|..+|++..     .+...+ -|.+.|+++
T Consensus       229 s~G~sqqv~L~nve-tg-~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtsl  304 (425)
T KOG2695|consen  229 SVGLSQQVLLTNVE-TG-HQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSL  304 (425)
T ss_pred             cccccceeEEEEee-cc-cccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhh
Confidence            33456667777887 33 234455 677899999985 778999999999999999864     334444 488899998


Q ss_pred             EEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE--EecCCCEEEEecCCCeEEEEE
Q psy10662         82 GLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG--LATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        82 ~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ..-. ++.+|.+.+.+|.|++||++..++..          -+.+..+|.+.-.-+-  ..+....++++++|...++|.
T Consensus       305 q~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~----------~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWs  374 (425)
T KOG2695|consen  305 QILQFSQQKLMASDMTGKIKLYDLRATKCKK----------SVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWS  374 (425)
T ss_pred             hhhccccceEeeccCcCceeEeeehhhhccc----------ceeeeecccccccccccccccccceEEEccCeeEEEEEe
Confidence            8766 67889999999999999998766621          1233467766544433  356677899999999999999


Q ss_pred             cCCCCceeeeeee
Q psy10662        159 KGLSKHMHAYRFD  171 (221)
Q Consensus       159 ~~~~~~~~~~~~~  171 (221)
                      ++.+..+.++.|.
T Consensus       375 l~~ghLl~tipf~  387 (425)
T KOG2695|consen  375 LDSGHLLCTIPFP  387 (425)
T ss_pred             cccCceeeccCCC
Confidence            9999988777654

>KOG0309|consensus

Probab=99.28  E-value=2.9e-11  Score=92.85  Aligned_cols=196  Identities=15%  Similarity=0.233  Sum_probs=136.5

Q ss_pred             CCCeEEEEEecC--CceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCc-cceeeeccccceeEEEEeC
Q psy10662         11 ADHCVHYYDLRN--TKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPN-CLRSFVGHINDKNFVGLAT   85 (221)
Q Consensus        11 ~dg~i~i~~~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~-~~~~~~~~~~~v~~~~~~~   85 (221)
                      ....-.+|++..  .......+.+|...|+.+.|+|.  ..+++++.|-.+..||+++.. ++.....-...-..++|+.
T Consensus        89 s~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwny  168 (1081)
T KOG0309|consen   89 SNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNY  168 (1081)
T ss_pred             CcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecc
Confidence            344456788763  23455667889999999999974  459999999999999999864 4444444455667889987


Q ss_pred             CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCc
Q psy10662         86 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKH  164 (221)
Q Consensus        86 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~  164 (221)
                      ....+.+.+..+.|.+||++.+....            ..+++|...++.++|.. ....+.+++.||+|++||......
T Consensus       169 k~p~vlasshg~~i~vwd~r~gs~pl------------~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~  236 (1081)
T KOG0309|consen  169 KDPNVLASSHGNDIFVWDLRKGSTPL------------CSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT  236 (1081)
T ss_pred             cCcchhhhccCCceEEEeccCCCcce------------EEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccc
Confidence            66666666777789999998765432            34577888888898875 344688999999999999754322


Q ss_pred             eeeeeeec----------------------------------------ccccccccccccccccceeEEEEcCCC-----
Q psy10662        165 MHAYRFDT----------------------------------------VRSMLERDRNEDDTNEFVSAVCWRQLS-----  199 (221)
Q Consensus       165 ~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~-----  199 (221)
                      ........                                        ......++..+.+|...|....|-..+     
T Consensus       237 e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d  316 (1081)
T KOG0309|consen  237 ESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGD  316 (1081)
T ss_pred             ccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCC
Confidence            11110000                                        001223455667888877766664322     


Q ss_pred             -----cEEEEecCCCeEEEEECCc
Q psy10662        200 -----RVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       200 -----~~l~~~~~dg~i~iw~~~~  218 (221)
                           -.|++-+.|..+++|-+.+
T Consensus       317 ~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  317 YDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             CCccceeEEEeecCCceEeeeccH
Confidence                 2699999999999998864

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.26  E-value=1.8e-09  Score=82.08  Aligned_cols=177  Identities=8%  Similarity=0.064  Sum_probs=102.3

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCc---E-EEecCC--CcEEEEEcCCCccceeeeccccceeEEEEeCCC
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED---I-VSASTD--SQLKLWNINKPNCLRSFVGHINDKNFVGLATDG   87 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---l-~s~~~d--~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~   87 (221)
                      .|.+.|.+  +...+.+........+-+|+|++.   + ++...+  ..|.+.++.+++..+ +....+.....+|+|||
T Consensus       166 ~l~~~d~d--G~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p~wSPDG  242 (428)
T PRK01029        166 ELWSVDYD--GQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMPTFSPRK  242 (428)
T ss_pred             eEEEEcCC--CCCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccceEECCCC
Confidence            56666665  333344554566677889998743   3 234344  357788887775433 33344455678999999


Q ss_pred             CEEEEecC-----CCeEEEEECCCCe--eeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEE-
Q psy10662         88 DYVACGSE-----NNSLYIYYKGLSK--HMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYY-  158 (221)
Q Consensus        88 ~~l~~~~~-----d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d-  158 (221)
                      +.|+..+.     +..+..|++..+.  ....+            ...........+|+|||+.|+..+ .+|...+|. 
T Consensus       243 ~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~l------------t~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~  310 (428)
T PRK01029        243 KLLAFISDRYGNPDLFIQSFSLETGAIGKPRRL------------LNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIM  310 (428)
T ss_pred             CEEEEEECCCCCcceeEEEeecccCCCCcceEe------------ecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEE
Confidence            98765442     2234446655421  11111            111222345679999999877655 456555554 


Q ss_pred             -cCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC---CCeEEEEECCccc
Q psy10662        159 -KGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS---QGIIKIYVIPIRV  220 (221)
Q Consensus       159 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~  220 (221)
                       +... .....+               ..+...+....|+|||+.|+..+.   ...|.+||+.+++
T Consensus       311 ~~~~~g~~~~~l---------------t~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~  362 (428)
T PRK01029        311 QIDPEGQSPRLL---------------TKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR  362 (428)
T ss_pred             ECcccccceEEe---------------ccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence             3211 111111               112234567899999998887654   2479999998765

>KOG2695|consensus

Probab=99.26  E-value=4.2e-11  Score=84.21  Aligned_cols=148  Identities=11%  Similarity=0.118  Sum_probs=109.0

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         48 IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                      -++.+.+-.+-+-|++++.. +.+. .++.|.++.|...+++++.|+.+|.|..+|++....        .+..+ ....
T Consensus       227 hfs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnq--------G~~~~-a~rl  295 (425)
T KOG2695|consen  227 HFSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQ--------GNGWC-AQRL  295 (425)
T ss_pred             eecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeeccc--------CCCcc-eEEE
Confidence            36677778888888877643 2333 567799999998899999999999999999986511        11111 1224


Q ss_pred             EeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCc---eeeeeeecccccccccccccccccc--eeEEEEcCCCcE
Q psy10662        128 GHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKH---MHAYRFDTVRSMLERDRNEDDTNEF--VSAVCWRQLSRV  201 (221)
Q Consensus       128 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~  201 (221)
                      -|.+.|+++..-. ++++|++.+.+|+|++||++..++   +..+.               +|-..  -.-+...+....
T Consensus       296 yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYe---------------GHvN~~a~l~~~v~~eeg~  360 (425)
T KOG2695|consen  296 YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYE---------------GHVNLSAYLPAHVKEEEGS  360 (425)
T ss_pred             EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeee---------------cccccccccccccccccce
Confidence            6888899988766 788999999999999999987766   33332               44221  122345667788


Q ss_pred             EEEecCCCeEEEEECCcccC
Q psy10662        202 LVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       202 l~~~~~dg~i~iw~~~~~~l  221 (221)
                      +++++.|...+||.++.|+|
T Consensus       361 I~s~GdDcytRiWsl~~ghL  380 (425)
T KOG2695|consen  361 IFSVGDDCYTRIWSLDSGHL  380 (425)
T ss_pred             EEEccCeeEEEEEecccCce
Confidence            88899999999999998865

>KOG0882|consensus

Probab=99.26  E-value=3.4e-10  Score=82.40  Aligned_cols=216  Identities=9%  Similarity=0.043  Sum_probs=143.3

Q ss_pred             CCceEEEEeC-CCeEEEEEecCCceeeEEEEeccCceEEEEE--ecCC---cEE-EecCCCcEEEEEcCCCc--cceeee
Q psy10662          2 NSCHLAFGSA-DHCVHYYDLRNTKEALAVFKGHRKAVSYVKF--LNKE---DIV-SASTDSQLKLWNINKPN--CLRSFV   72 (221)
Q Consensus         2 ~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~---~l~-s~~~d~~v~~wd~~~~~--~~~~~~   72 (221)
                      ++-++++.+. |..++++|++ ....+..++. ......+.|  +++.   .++ +.-.++.+.++|-....  ....-.
T Consensus        64 dg~L~~Sv~d~Dhs~KvfDvE-n~DminmiKL-~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkk  141 (558)
T KOG0882|consen   64 DGWLFRSVEDPDHSVKVFDVE-NFDMINMIKL-VDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKK  141 (558)
T ss_pred             cceeEeeccCcccceeEEEee-ccchhhhccc-ccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecc
Confidence            5667788777 9999999998 3333322221 111122233  2432   232 34458899999976543  222335


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCC-Cee-eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGL-SKH-MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      -|..+|.++.+++.++.+++....|.|.-|.... -+. -..+.|+.........+........++.|+|++..+.+-+.
T Consensus       142 lH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~  221 (558)
T KOG0882|consen  142 LHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP  221 (558)
T ss_pred             cccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCc
Confidence            6889999999999999999999999999998763 222 22233444444444445566778889999999999999999


Q ss_pred             CCeEEEEEcCCCCceeeeeeeccc-----------------cccccccccccccc-ceeEEEEcCCCcEEEEecCCCeEE
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVR-----------------SMLERDRNEDDTNE-FVSAVCWRQLSRVLVAANSQGIIK  212 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~  212 (221)
                      |..|++++..+++..+.++-....                 +.+.....++.|.. .-..++|...|++|+-++.=| |+
T Consensus       222 DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ik  300 (558)
T KOG0882|consen  222 DRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IK  300 (558)
T ss_pred             ccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EE
Confidence            999999999999887766421110                 00001111222332 335788999999999998776 88


Q ss_pred             EEECCccc
Q psy10662        213 IYVIPIRV  220 (221)
Q Consensus       213 iw~~~~~~  220 (221)
                      +.++.++.
T Consensus       301 vin~~tn~  308 (558)
T KOG0882|consen  301 VINLDTNT  308 (558)
T ss_pred             EEEeecCe
Confidence            89888765

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.24  E-value=1.8e-08  Score=71.61  Aligned_cols=201  Identities=12%  Similarity=0.157  Sum_probs=124.6

Q ss_pred             CCCceEEEEeC-CCeEEEEEecCCceeeE--EEEeccCc----------eEEEEEecCCc-EEEecC-CCcEEEEEcCCC
Q psy10662          1 MNSCHLAFGSA-DHCVHYYDLRNTKEALA--VFKGHRKA----------VSYVKFLNKED-IVSAST-DSQLKLWNINKP   65 (221)
Q Consensus         1 ~~~~~l~~~~~-dg~i~i~~~~~~~~~~~--~~~~~~~~----------i~~~~~~~~~~-l~s~~~-d~~v~~wd~~~~   65 (221)
                      +++++|+++.. .|.|.++-+...+.+..  ..-.|.+.          +.+..+.|++. |+++.. -..|.+|++..+
T Consensus        98 ~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg  177 (346)
T COG2706          98 EDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDG  177 (346)
T ss_pred             CCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccC
Confidence            46777777755 47899999874443322  22235555          78888888765 444432 346889999876


Q ss_pred             ccceee---eccccceeEEEEeCCCCEEEEec-CCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         66 NCLRSF---VGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        66 ~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                      +....-   ......-..|.|+|++++..... -+++|.+|..... ..+..++.   .......+. .......+..+|
T Consensus       178 ~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~---i~tlP~dF~-g~~~~aaIhis~  253 (346)
T COG2706         178 KLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQT---IDTLPEDFT-GTNWAAAIHISP  253 (346)
T ss_pred             ccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeee---eccCccccC-CCCceeEEEECC
Confidence            543221   12334568999999999875544 5889999988764 22222210   000111111 233456788899


Q ss_pred             CCCEEEEecCC-CeEEEEEcCCCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEECC
Q psy10662        141 DGDYVACGSEN-NSLYIYYKGLSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVIP  217 (221)
Q Consensus       141 ~~~~l~~~~~d-~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~  217 (221)
                      +|++|.++... ..|.+|.+..... +..+.            ....+....+...|++.|++|+++.. +..|.+|...
T Consensus       254 dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~------------~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d  321 (346)
T COG2706         254 DGRFLYASNRGHDSIAVFSVDPDGGKLELVG------------ITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERD  321 (346)
T ss_pred             CCCEEEEecCCCCeEEEEEEcCCCCEEEEEE------------EeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEc
Confidence            99999987753 4677776654422 22221            22234445678999999999999885 4568888775

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.23  E-value=1.5e-07  Score=66.56  Aligned_cols=187  Identities=13%  Similarity=0.051  Sum_probs=118.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeec-----cc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVG-----HI   75 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~-----~~   75 (221)
                      ++.++++-...+.|..|+.. ++.. ..+...  ....+++. +++.++.+...+. .++|..+++.......     ..
T Consensus        11 ~g~l~~~D~~~~~i~~~~~~-~~~~-~~~~~~--~~~G~~~~~~~g~l~v~~~~~~-~~~d~~~g~~~~~~~~~~~~~~~   85 (246)
T PF08450_consen   11 DGRLYWVDIPGGRIYRVDPD-TGEV-EVIDLP--GPNGMAFDRPDGRLYVADSGGI-AVVDPDTGKVTVLADLPDGGVPF   85 (246)
T ss_dssp             TTEEEEEETTTTEEEEEETT-TTEE-EEEESS--SEEEEEEECTTSEEEEEETTCE-EEEETTTTEEEEEEEEETTCSCT
T ss_pred             CCEEEEEEcCCCEEEEEECC-CCeE-EEEecC--CCceEEEEccCCEEEEEEcCce-EEEecCCCcEEEEeeccCCCccc
Confidence            46677777678889999987 3332 233322  27777887 7788887776554 5559888755433322     23


Q ss_pred             cceeEEEEeCCCCEEEEecCC--------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE-
Q psy10662         76 NDKNFVGLATDGDYVACGSEN--------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA-  146 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-  146 (221)
                      ...+.+++.|+|++.++....        |.|..++.. ++...              ....-...+.++|+|+++.|+ 
T Consensus        86 ~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~--------------~~~~~~~pNGi~~s~dg~~lyv  150 (246)
T PF08450_consen   86 NRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV--------------VADGLGFPNGIAFSPDGKTLYV  150 (246)
T ss_dssp             EEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE--------------EEEEESSEEEEEEETTSSEEEE
T ss_pred             CCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEE--------------EecCcccccceEECCcchheee
Confidence            467899999999977776543        456666665 33221              233455678999999998765 


Q ss_pred             EecCCCeEEEEEcCCCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        147 CGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       147 ~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +-+..+.|..|++..... +....         ............-.++++.+|++.++....+.|.+++.+
T Consensus       151 ~ds~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~  213 (246)
T PF08450_consen  151 ADSFNGRIWRFDLDADGGELSNRR---------VFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD  213 (246)
T ss_dssp             EETTTTEEEEEEEETTTCCEEEEE---------EEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT
T ss_pred             cccccceeEEEeccccccceeeee---------eEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC
Confidence            566788899998864432 21110         000011111346789999999988887788899999877

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG1275|consensus

Probab=99.23  E-value=3.9e-10  Score=88.57  Aligned_cols=185  Identities=11%  Similarity=0.155  Sum_probs=132.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      ++..++.|+....+..+|+. +.+..+......+.|+-|+.+ +..+++|...|+|.+-|.++.+.+.++..|.+.|..+
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~-~~~e~r~~~v~a~~v~imR~N-nr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf  223 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLN-TEKETRTTNVSASGVTIMRYN-NRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF  223 (1118)
T ss_pred             CCcceeecchhhheeeeecc-cceeeeeeeccCCceEEEEec-CcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence            45667778888888889998 566555555444457666643 5678999999999999999999999999999998876


Q ss_pred             EEeCCCCEEEEecC---------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEecCC
Q psy10662         82 GLATDGDYVACGSE---------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACGSEN  151 (221)
Q Consensus        82 ~~~~~~~~l~~~~~---------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d  151 (221)
                      ..  .|++|+++|.         |..|+|||++..+.+..+.+              .....-+.|+|. ...+++++..
T Consensus       224 Dv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~--------------~~~P~flrf~Psl~t~~~V~S~s  287 (1118)
T KOG1275|consen  224 DV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQF--------------PYGPQFLRFHPSLTTRLAVTSQS  287 (1118)
T ss_pred             ec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCccc--------------ccCchhhhhcccccceEEEEecc
Confidence            66  5888988875         55689999987766543311              111244667774 3467788888


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      |...+-|..+....           .............+.+++++++|+.|+.|..+|.|.+|.
T Consensus       288 Gq~q~vd~~~lsNP-----------~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  288 GQFQFVDTATLSNP-----------PAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             cceeeccccccCCC-----------ccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            98888884322111           000001112344589999999999999999999999997

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.20  E-value=2.3e-08  Score=73.79  Aligned_cols=108  Identities=15%  Similarity=0.094  Sum_probs=84.7

Q ss_pred             CCceEEEEeCCC-eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADH-CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg-~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      +++-++.|..|| .+-|||.+ +++ ++.+...-+.|.++..++++. ++.+.....+-+.|+.++.....-+...+-|+
T Consensus       370 ~~e~~vigt~dgD~l~iyd~~-~~e-~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lIt  447 (668)
T COG4946         370 DPEGDVIGTNDGDKLGIYDKD-GGE-VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLIT  447 (668)
T ss_pred             CCcceEEeccCCceEEEEecC-Cce-EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeE
Confidence            345678888998 89999987 444 556666778899999998655 77777778899999999876544455567899


Q ss_pred             EEEEeCCCCEEEEecCCC----eEEEEECCCCeeeE
Q psy10662         80 FVGLATDGDYVACGSENN----SLYIYYKGLSKHMH  111 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~  111 (221)
                      .+.|||+++++|-+--+|    .|+++|+..++...
T Consensus       448 df~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~  483 (668)
T COG4946         448 DFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYD  483 (668)
T ss_pred             EEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEE
Confidence            999999999999887665    58999998876543

>KOG4532|consensus

Probab=99.19  E-value=9.2e-09  Score=70.42  Aligned_cols=194  Identities=9%  Similarity=-0.006  Sum_probs=128.9

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEeccC--ceEEEEEecC-CcEEEecCCCcEEEEEcCCCc-ccee--eecccccee
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKGHRK--AVSYVKFLNK-EDIVSASTDSQLKLWNINKPN-CLRS--FVGHINDKN   79 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~--~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~-~~~~--~~~~~~~v~   79 (221)
                      +..++.|.++++.+++ .+.....  .|..  .+.+++++|+ ..+++.+....|..|.+.... .+..  .....+.-.
T Consensus       131 ~~i~sndht~k~~~~~-~~s~~~~--~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF  207 (344)
T KOG4532|consen  131 LNIASNDHTGKTMVVS-GDSNKFA--VHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGF  207 (344)
T ss_pred             eeeccCCcceeEEEEe-cCcccce--eeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCce
Confidence            5567788888888887 3322222  2333  3788888875 457788999999999986542 2222  222334457


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC--EEEEecCCCeEEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD--YVACGSENNSLYIY  157 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~~~  157 (221)
                      +..|+.....+|++..||++.|||++........        ...+-+.|.+.+..+.|+|.|.  +|...-.-+.+.+.
T Consensus       208 ~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~--------~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~  279 (344)
T KOG4532|consen  208 YNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAE--------ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVV  279 (344)
T ss_pred             eeeeccCcceEEEEecCCcEEEEEecccccchhh--------hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEE
Confidence            8889998889999999999999999865433221        1122345889999999998654  45545456789999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      |+++....+.+......       ........|...+|+.++.-+.+.+++. +.-|++.+
T Consensus       280 D~R~~~~~q~I~i~~d~-------~~~~~tq~ifgt~f~~~n~s~~v~~e~~-~ae~ni~s  332 (344)
T KOG4532|consen  280 DTRNYVNHQVIVIPDDV-------ERKHNTQHIFGTNFNNENESNDVKNELQ-GAEYNILS  332 (344)
T ss_pred             EcccCceeeEEecCccc-------cccccccccccccccCCCcccccccchh-hheeeccc
Confidence            99998877665433222       1112234488889998888777776543 45565544

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.18  E-value=3.8e-08  Score=70.02  Aligned_cols=194  Identities=9%  Similarity=0.094  Sum_probs=121.1

Q ss_pred             CCeEEEEEecCCceeeE--EEEeccCceEEEEEecCC-cEEEecC---CCcEEEEEcCC--Cccc--eeeeccccceeEE
Q psy10662         12 DHCVHYYDLRNTKEALA--VFKGHRKAVSYVKFLNKE-DIVSAST---DSQLKLWNINK--PNCL--RSFVGHINDKNFV   81 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~-~l~s~~~---d~~v~~wd~~~--~~~~--~~~~~~~~~v~~~   81 (221)
                      +.-|++|++.+....+.  .+-.+.+.++-|+|+|++ .|.++-.   +|.|..|.+..  |+.-  ........+.+.+
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv   94 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV   94 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence            56799999983222122  223466788999999865 5666644   57788777764  4332  1112223344889


Q ss_pred             EEeCCCCEEEEecC-CCeEEEEECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CCeEEEEE
Q psy10662         82 GLATDGDYVACGSE-NNSLYIYYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NNSLYIYY  158 (221)
Q Consensus        82 ~~~~~~~~l~~~~~-d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d  158 (221)
                      ++++++++++++.. -|.|.++-++. +......+.......-.. ......-+....+.|+++++++.+- .-.|.+|+
T Consensus        95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~-~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~  173 (346)
T COG2706          95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPH-ERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYD  173 (346)
T ss_pred             EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCC-ccccCCccceeeeCCCCCEEEEeecCCceEEEEE
Confidence            99999999887764 57899998865 332221111100000000 0001112678889999999988764 34799999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEECCc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVIPI  218 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~  218 (221)
                      +..++....-....            ......+.+.|+|++++.+..++ +++|.+|....
T Consensus       174 ~~dg~L~~~~~~~v------------~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~  222 (346)
T COG2706         174 LDDGKLTPADPAEV------------KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP  222 (346)
T ss_pred             cccCcccccccccc------------CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence            98665432221110            22344678999999999988886 99999999876

>KOG2041|consensus

Probab=99.17  E-value=7.1e-10  Score=85.36  Aligned_cols=104  Identities=15%  Similarity=0.210  Sum_probs=81.6

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc--------------eeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK--------------EALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPN   66 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~--------------~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~   66 (221)
                      ...++|+|+.||.+++..+.+..              ..-+++.+|++.|.-+.|+. .+.|-+...+|.|.+|-+-++.
T Consensus        25 e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgs  104 (1189)
T KOG2041|consen   25 ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGS  104 (1189)
T ss_pred             cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeeccc
Confidence            35789999999999999876311              22356789999999999995 5568888889999999998876


Q ss_pred             cceee--eccccceeEEEEeCCCCEEEEecCCCeEEEEECC
Q psy10662         67 CLRSF--VGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  105 (221)
Q Consensus        67 ~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~  105 (221)
                      ....+  ...++.|.+++|+.+|..++..-.||.|.+=.+.
T Consensus       105 W~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd  145 (1189)
T KOG2041|consen  105 WCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD  145 (1189)
T ss_pred             HHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec
Confidence            54433  2345679999999999999988888887665443

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.17  E-value=4.3e-08  Score=74.26  Aligned_cols=182  Identities=10%  Similarity=0.083  Sum_probs=106.0

Q ss_pred             CCCce-EEEEeCC---CeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EE-EecCC--CcEEEEEcCCCccceeee
Q psy10662          1 MNSCH-LAFGSAD---HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IV-SASTD--SQLKLWNINKPNCLRSFV   72 (221)
Q Consensus         1 ~~~~~-l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~-s~~~d--~~v~~wd~~~~~~~~~~~   72 (221)
                      |||+. ++..+.+   ..|.++|+. +++... +....+......|+|++. ++ +.+.+  ..|.++|+.+++.. .+.
T Consensus       197 pDG~~~i~y~s~~~~~~~Iyv~dl~-tg~~~~-lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT  273 (419)
T PRK04043        197 NKEQTAFYYTSYGERKPTLYKYNLY-TGKKEK-IASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT-QIT  273 (419)
T ss_pred             CCCCcEEEEEEccCCCCEEEEEECC-CCcEEE-EecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE-Ecc
Confidence            67874 5544443   468888987 554433 333555667788998653 43 44433  56888888776543 343


Q ss_pred             ccccceeEEEEeCCCCEEEEec-CCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662         73 GHINDKNFVGLATDGDYVACGS-ENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~-~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                      .+........|+|||+.++-.+ ..+  .|.+.|+.+++..+..            ..+.    ....|+|+|+.|+...
T Consensus       274 ~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt------------~~g~----~~~~~SPDG~~Ia~~~  337 (419)
T PRK04043        274 NYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVV------------FHGK----NNSSVSTYKNYIVYSS  337 (419)
T ss_pred             cCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCc------------cCCC----cCceECCCCCEEEEEE
Confidence            3433344568999998765544 333  5777777766542211            1111    1248999999887665


Q ss_pred             CC---------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC---CCeEEEEECC
Q psy10662        150 EN---------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS---QGIIKIYVIP  217 (221)
Q Consensus       150 ~d---------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~  217 (221)
                      ..         ..|.+.|+.++... .+.               .. .......|+|||+.|+..+.   ...+.+.++.
T Consensus       338 ~~~~~~~~~~~~~I~v~d~~~g~~~-~LT---------------~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~  400 (419)
T PRK04043        338 RETNNEFGKNTFNLYLISTNSDYIR-RLT---------------AN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLN  400 (419)
T ss_pred             cCCCcccCCCCcEEEEEECCCCCeE-ECC---------------CC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecC
Confidence            43         25777777665421 111               00 11224789999998766553   2246666665


Q ss_pred             c
Q psy10662        218 I  218 (221)
Q Consensus       218 ~  218 (221)
                      .
T Consensus       401 g  401 (419)
T PRK04043        401 Y  401 (419)
T ss_pred             C
Confidence            4

>KOG2066|consensus

Probab=99.16  E-value=5.7e-09  Score=81.14  Aligned_cols=180  Identities=12%  Similarity=0.170  Sum_probs=124.6

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG   82 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~   82 (221)
                      +..|+-|..+|.|++++..  +.+ .+...|+..     -..+.++++|+.||+|.|-.+-+.+....+. ...++.+++
T Consensus        49 ~~~~~~GtH~g~v~~~~~~--~~~-~~~~~~s~~-----~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksia  119 (846)
T KOG2066|consen   49 DKFFALGTHRGAVYLTTCQ--GNP-KTNFDHSSS-----ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIA  119 (846)
T ss_pred             cceeeeccccceEEEEecC--Ccc-ccccccccc-----ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEE
Confidence            5688999999999999986  333 333335443     1247789999999999999998888777664 567899999


Q ss_pred             EeCC-----CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         83 LATD-----GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        83 ~~~~-----~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      ++|+     .+.+++|+.-| +.++.-+--.....           ..+....++|.++.|.  |++||-++.+| |++|
T Consensus       120 l~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~-----------v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vy  184 (846)
T KOG2066|consen  120 LHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDS-----------VVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVY  184 (846)
T ss_pred             eccchhhhhhhheeecCcce-EEEehhhhhcCccc-----------eeeecCccceEEEEec--CcEEEEecCCC-cEEE
Confidence            9998     45799999988 77764321111100           1234557889999997  66999888877 8999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      |+.+.+.+..++++.....         .+.....+.|.++.++++.-  ..+|++..++
T Consensus       185 d~~~~~~l~~i~~p~~~~R---------~e~fpphl~W~~~~~LVIGW--~d~v~i~~I~  233 (846)
T KOG2066|consen  185 DTPTRQRLTNIPPPSQSVR---------PELFPPHLHWQDEDRLVIGW--GDSVKICSIK  233 (846)
T ss_pred             eccccceeeccCCCCCCCC---------cccCCCceEecCCCeEEEec--CCeEEEEEEe
Confidence            9999888777664431111         12223457888776544433  3367777776

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.14  E-value=2.1e-10  Score=56.45  Aligned_cols=38  Identities=29%  Similarity=0.719  Sum_probs=35.8

Q ss_pred             ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEE
Q psy10662         66 NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  103 (221)
Q Consensus        66 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd  103 (221)
                      +++..+.+|.+.|++++|+|++.++++++.|+.|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            56778899999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2315|consensus

Probab=99.13  E-value=7e-09  Score=77.45  Aligned_cols=127  Identities=10%  Similarity=0.159  Sum_probs=91.4

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E--EEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I--VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYV   90 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l--~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l   90 (221)
                      ++++.+.. +....-.+. ..++|.++.|+|++. +  +-|-.=-.+.+||++ +.++..+  ..++=+++-|+|.|+++
T Consensus       252 ~Lyll~t~-g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii  326 (566)
T KOG2315|consen  252 TLYLLATQ-GESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNII  326 (566)
T ss_pred             eEEEEEec-CceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEE
Confidence            46666655 333333333 478999999998653 3  344556789999984 5666555  45566889999999998


Q ss_pred             EEecCC---CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC------CCeEEEEEcC
Q psy10662         91 ACGSEN---NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE------NNSLYIYYKG  160 (221)
Q Consensus        91 ~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~  160 (221)
                      +.++.+   |.+-+||+.+.+.+..+             .  ...-+-++|+|||.+|+|++.      |+.++||+..
T Consensus       327 ~lAGFGNL~G~mEvwDv~n~K~i~~~-------------~--a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt  390 (566)
T KOG2315|consen  327 LLAGFGNLPGDMEVWDVPNRKLIAKF-------------K--AANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT  390 (566)
T ss_pred             EEeecCCCCCceEEEeccchhhcccc-------------c--cCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence            777654   78999999887776553             1  223456899999999998875      6789999864

>KOG4714|consensus

Probab=99.13  E-value=8e-10  Score=75.09  Aligned_cols=148  Identities=10%  Similarity=0.107  Sum_probs=91.6

Q ss_pred             cCCcEEEecCCCcEEEEEcCCCccce-eeeccccceeEEEEeCCCCEEEEecCCC------eEEEEECCCCeeeEEEEee
Q psy10662         44 NKEDIVSASTDSQLKLWNINKPNCLR-SFVGHINDKNFVGLATDGDYVACGSENN------SLYIYYKGLSKHMHAYRFD  116 (221)
Q Consensus        44 ~~~~l~s~~~d~~v~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~v~iwd~~~~~~~~~~~~~  116 (221)
                      ++..++++..||.+.+++.+....+. .+..-...-.+.+....++++.++. -|      ..++|+++..+...     
T Consensus       100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~-~g~~n~~d~~~a~~~~p~~t~~-----  173 (319)
T KOG4714|consen  100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGG-CGNWNAQDNFYANTLDPIKTLI-----  173 (319)
T ss_pred             cCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCC-cceEeeccceeeeccccccccc-----
Confidence            46679999999999999987622111 1111111112233333455544442 22      23344433221110     


Q ss_pred             cccceeEeeEEEeeCceEEEEEecCC-CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE
Q psy10662        117 TVRSMLESSFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW  195 (221)
Q Consensus       117 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  195 (221)
                            ..  ......|++++-+|.. +.+++|+.||.+.+||.+.....              ...+..|..+++.+.|
T Consensus       174 ------~~--~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p--------------~S~l~ahk~~i~eV~F  231 (319)
T KOG4714|consen  174 ------PS--KKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMP--------------VSLLKAHKAEIWEVHF  231 (319)
T ss_pred             ------cc--ccccccchhhhCCcccccEEEEecCCCeEEEEEcccccch--------------HHHHHHhhhhhhheec
Confidence                  00  1112238888888854 56778889999999998765322              2234578899999999


Q ss_pred             cC-CCcEEEEecCCCeEEEEECCcc
Q psy10662        196 RQ-LSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       196 ~~-~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      +| ++..|++++.||.+--||-.+.
T Consensus       232 Hpk~p~~Lft~sedGslw~wdas~~  256 (319)
T KOG4714|consen  232 HPKNPEHLFTCSEDGSLWHWDASTT  256 (319)
T ss_pred             cCCCchheeEecCCCcEEEEcCCCc
Confidence            99 6789999999999999998753

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=99.11  E-value=4.4e-08  Score=74.08  Aligned_cols=149  Identities=13%  Similarity=0.100  Sum_probs=94.0

Q ss_pred             CceEEEEEec--CCcEEEe----cCCCcE----EEEEcCCCccce--ee-eccccceeEEEEeCCCCEEEEecCCCeEEE
Q psy10662         35 KAVSYVKFLN--KEDIVSA----STDSQL----KLWNINKPNCLR--SF-VGHINDKNFVGLATDGDYVACGSENNSLYI  101 (221)
Q Consensus        35 ~~i~~~~~~~--~~~l~s~----~~d~~v----~~wd~~~~~~~~--~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i  101 (221)
                      ....++.|+-  +..+.+.    +.+|.+    .+|++...+..+  .. -.....+.+++++|+.+.++.|+.||.|.+
T Consensus       206 ~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiL  285 (545)
T PF11768_consen  206 NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIIL  285 (545)
T ss_pred             CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEE
Confidence            3456777872  3444443    445543    456665443221  11 246778999999999999999999999999


Q ss_pred             EECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeec-cccccccc
Q psy10662        102 YYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDT-VRSMLERD  180 (221)
Q Consensus       102 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~  180 (221)
                      ||...+...               .....-.++.++|+|+|..+++|+..|.+.+||+........+-.+. .......+
T Consensus       286 yD~~~~~t~---------------~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~~qLlsEd~~P~~~L~L  350 (545)
T PF11768_consen  286 YDTTRGVTL---------------LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPIKMQLLSEDATPKSTLQL  350 (545)
T ss_pred             EEcCCCeee---------------eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCccceeeccccCCCccEEee
Confidence            998765332               12334457889999999999999999999999987554332221111 01111112


Q ss_pred             ccccccccceeEEEEcCC
Q psy10662        181 RNEDDTNEFVSAVCWRQL  198 (221)
Q Consensus       181 ~~~~~~~~~v~~~~~~~~  198 (221)
                      ..+-.+...+..+.|.+.
T Consensus       351 s~yf~~~~~L~~iqW~~~  368 (545)
T PF11768_consen  351 SKYFRVSSSLVHIQWAPA  368 (545)
T ss_pred             ehhccCcchhheeEeccC
Confidence            222244556677888743

>KOG0882|consensus

Probab=99.11  E-value=9.3e-10  Score=80.17  Aligned_cols=203  Identities=9%  Similarity=0.024  Sum_probs=134.2

Q ss_pred             ceEEEEeCCCeEEEEEecC--CceeeEEEEeccCceEEEEEecCCc-EEEecC-CCcEEEEEcCCCccceeeec--cccc
Q psy10662          4 CHLAFGSADHCVHYYDLRN--TKEALAVFKGHRKAVSYVKFLNKED-IVSAST-DSQLKLWNINKPNCLRSFVG--HIND   77 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~-d~~v~~wd~~~~~~~~~~~~--~~~~   77 (221)
                      +++.+++.||.++.|.-..  .-+.+..+..|-+.|.+++.+-++. +.|.+. |..++++|+++-..+..++-  .++.
T Consensus        21 ~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~  100 (558)
T KOG0882|consen   21 KFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGF  100 (558)
T ss_pred             heEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCc
Confidence            5788999999999998652  1244556677888899998886555 556676 99999999988766543322  2222


Q ss_pred             eeEEEEeCCCC---EEE-EecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         78 KNFVGLATDGD---YVA-CGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        78 v~~~~~~~~~~---~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      +.  .+...|.   .++ +.-.++.+.++|-....+...           ..-.-|..+|..+.+.|.+..+++....|.
T Consensus       101 a~--wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~-----------~fkklH~sPV~~i~y~qa~Ds~vSiD~~gm  167 (558)
T KOG0882|consen  101 AE--WVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDG-----------YFKKLHFSPVKKIRYNQAGDSAVSIDISGM  167 (558)
T ss_pred             eE--EecCCCCeeeeEEeecccCCCcEEECCcCCcCccc-----------eecccccCceEEEEeeccccceeeccccce
Confidence            22  1222231   333 344678899998654432111           123467889999999999999999999999


Q ss_pred             EEEEEcCC-CCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        154 LYIYYKGL-SKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       154 i~~~d~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      |.-|.... -+. ...+.|.....  ..+...........++.|+|+|..+.+-+.|..|+++.+.+|+|
T Consensus       168 VEyWs~e~~~qfPr~~l~~~~K~e--TdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGkl  235 (558)
T KOG0882|consen  168 VEYWSAEGPFQFPRTNLNFELKHE--TDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKL  235 (558)
T ss_pred             eEeecCCCcccCcccccccccccc--chhhcccccccCccceEEccccCcccccCcccEEEEEEeccchh
Confidence            99998763 110 01111111000  00111112234567899999999999999999999999999875

>KOG1354|consensus

Probab=99.10  E-value=2.4e-09  Score=75.58  Aligned_cols=210  Identities=13%  Similarity=0.164  Sum_probs=124.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEE--Eec-----cCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccc----
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVF--KGH-----RKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCL----   68 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~--~~~-----~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~----   68 (221)
                      |+..++++ .|=.|.+|+++-..+.....  +.+     ..-|++..|+|  .+.++-.+..|+|++.|++....-    
T Consensus       175 D~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hs  253 (433)
T KOG1354|consen  175 DKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHS  253 (433)
T ss_pred             ccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchh
Confidence            55666666 67789999998444333222  222     23588999998  456888899999999999853211    


Q ss_pred             ------------eeeeccccceeEEEEeCCCCEEEEecCCCeEEEEEC-CCCeeeEEEEeecccceeEeeEEEee--Cce
Q psy10662         69 ------------RSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK-GLSKHMHAYRFDTVRSMLESSFVGHI--NDK  133 (221)
Q Consensus        69 ------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v  133 (221)
                                  .-+.+--..|..+.|+++|+|+++-.. -+|++||+ ...+++.+++........+..+....  -.-
T Consensus       254 KlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdK  332 (433)
T KOG1354|consen  254 KLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDK  332 (433)
T ss_pred             hhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhhe
Confidence                        011122346889999999999987644 47999999 45566665532111100000000000  112


Q ss_pred             EEEEEecCCCEEEEecCCCeEEEEEcCCCCce-eeeeeeccccccccccc---------c---------cccccceeEEE
Q psy10662        134 NFVGLATDGDYVACGSENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRN---------E---------DDTNEFVSAVC  194 (221)
Q Consensus       134 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~---------~---------~~~~~~v~~~~  194 (221)
                      ..++|+.++.++++|+....+++|++..+... ..+..............         .         -.....+...+
T Consensus       333 Fec~~sg~~~~v~TGsy~n~frvf~~~~gsk~d~tl~asr~~~~~~~~~k~~~V~~~g~r~~~~~~vd~ldf~kkilh~a  412 (433)
T KOG1354|consen  333 FECSWSGNDSYVMTGSYNNVFRVFNLARGSKEDFTLEASRKNMKPRKVLKLRLVSSSGKRKRDEISVDALDFRKKILHTA  412 (433)
T ss_pred             eEEEEcCCcceEecccccceEEEecCCCCcceeecccccccCCcccccccceeeecCCCccccccccchhhhhhHHHhhc
Confidence            35789999999999999999999996554322 11111111100000000         0         01123466778


Q ss_pred             EcCCCcEEEEecCCCeEEEE
Q psy10662        195 WRQLSRVLVAANSQGIIKIY  214 (221)
Q Consensus       195 ~~~~~~~l~~~~~dg~i~iw  214 (221)
                      |+|..+.+|.+..++ +.++
T Consensus       413 Whp~en~ia~aatnn-lyif  431 (433)
T KOG1354|consen  413 WHPKENSIAVAATNN-LYIF  431 (433)
T ss_pred             cCCccceeeeeecCc-eEEe
Confidence            999999998886554 5554

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.09  E-value=8.4e-08  Score=72.20  Aligned_cols=151  Identities=13%  Similarity=0.031  Sum_probs=95.0

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG   82 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~   82 (221)
                      +..+.+++.+|.|..+|.. +++.+............... .++.++.++.++.+..+|..+++.+...... ..+.+.-
T Consensus        65 ~~~v~v~~~~g~v~a~d~~-tG~~~W~~~~~~~~~~~p~v-~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~p  141 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAE-TGKRLWRVDLDERLSGGVGA-DGGLVFVGTEKGEVIALDAEDGKELWRAKLS-SEVLSPP  141 (377)
T ss_pred             CCEEEEECCCCeEEEEEcc-CCcEeeeecCCCCcccceEE-cCCEEEEEcCCCEEEEEECCCCcEeeeeccC-ceeecCC
Confidence            4577888889999999987 67777666543322222222 3677888899999999999999887655322 2222111


Q ss_pred             EeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC
Q psy10662         83 LATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS  162 (221)
Q Consensus        83 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~  162 (221)
                      .. .+..++.++.++.+..+|.++++.+..+......    ........    .... + ..++.+..++.+..+|.+++
T Consensus       142 ~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~----~~~~~~~s----p~~~-~-~~v~~~~~~g~v~ald~~tG  210 (377)
T TIGR03300       142 LV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPA----LTLRGSAS----PVIA-D-GGVLVGFAGGKLVALDLQTG  210 (377)
T ss_pred             EE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCc----eeecCCCC----CEEE-C-CEEEEECCCCEEEEEEccCC
Confidence            11 2456777788999999999999887665321110    00000001    1111 2 36677788889999998888


Q ss_pred             Cceee
Q psy10662        163 KHMHA  167 (221)
Q Consensus       163 ~~~~~  167 (221)
                      +.+-.
T Consensus       211 ~~~W~  215 (377)
T TIGR03300       211 QPLWE  215 (377)
T ss_pred             CEeee
Confidence            75543

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.09  E-value=6.6e-08  Score=66.89  Aligned_cols=167  Identities=16%  Similarity=0.131  Sum_probs=108.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEe-------ccCceEEEEEecC-------CcEEEecCCCcEEEEEcCCC-
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG-------HRKAVSYVKFLNK-------EDIVSASTDSQLKLWNINKP-   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~-------~~l~s~~~d~~v~~wd~~~~-   65 (221)
                      ||+.+||.+...|+|++||+. . ..+..+..       -..+|..|.|.+-       ..|+.-..+|.++-|-+..+ 
T Consensus        53 pD~tlLa~a~S~G~i~vfdl~-g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt  130 (282)
T PF15492_consen   53 PDCTLLAYAESTGTIRVFDLM-G-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGT  130 (282)
T ss_pred             CCCcEEEEEcCCCeEEEEecc-c-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEccc
Confidence            789999999999999999997 3 33333322       1356788888631       24777788888888776432 


Q ss_pred             ----ccceee--e-ccccceeEEEEeCCCCEEEEecC-CC----------eEEEEECCCCeeeEEEEe--eccc------
Q psy10662         66 ----NCLRSF--V-GHINDKNFVGLATDGDYVACGSE-NN----------SLYIYYKGLSKHMHAYRF--DTVR------  119 (221)
Q Consensus        66 ----~~~~~~--~-~~~~~v~~~~~~~~~~~l~~~~~-d~----------~v~iwd~~~~~~~~~~~~--~~~~------  119 (221)
                          +...++  . .+...|.++.++|..++|+.|+. ..          -+..|.+-.+.+-.....  +...      
T Consensus       131 ~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~  210 (282)
T PF15492_consen  131 NQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKR  210 (282)
T ss_pred             CCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccc
Confidence                222222  2 23668999999999888776653 11          256676654443222110  0000      


Q ss_pred             ceeE--ee--E----EEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee
Q psy10662        120 SMLE--SS--F----VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       120 ~~~~--~~--~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~  169 (221)
                      ....  ..  +    ......|..+..+|||+.||+...+|.|.+|++.+-.....+.
T Consensus       211 ~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~  268 (282)
T PF15492_consen  211 RGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK  268 (282)
T ss_pred             cceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence            0000  00  1    1235678899999999999999999999999998777666554

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.08  E-value=7.3e-10  Score=54.51  Aligned_cols=37  Identities=24%  Similarity=0.537  Sum_probs=34.3

Q ss_pred             eEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662        122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus       122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ++..+.+|...|++++|+|++++|++++.|+.|++||
T Consensus         3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4556799999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.04  E-value=1.1e-07  Score=79.59  Aligned_cols=161  Identities=12%  Similarity=0.069  Sum_probs=103.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEec---------------cCceEEEEEecCC--cEEEecCCCcEEEEEcCC
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGH---------------RKAVSYVKFLNKE--DIVSASTDSQLKLWNINK   64 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~---------------~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~   64 (221)
                      ++.++++.+.++.|++||.. .+.. ..+.+.               -.....|+++|++  .+++-+.++.|++||+.+
T Consensus       694 ~g~LyVad~~~~~I~v~d~~-~g~v-~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~t  771 (1057)
T PLN02919        694 NEKVYIAMAGQHQIWEYNIS-DGVT-RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKT  771 (1057)
T ss_pred             CCeEEEEECCCCeEEEEECC-CCeE-EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCC
Confidence            45666777778899999986 3332 222111               1235678999754  355667789999999986


Q ss_pred             Cccceee-------------ecc--------ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeE
Q psy10662         65 PNCLRSF-------------VGH--------INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE  123 (221)
Q Consensus        65 ~~~~~~~-------------~~~--------~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~  123 (221)
                      +......             -..        -.....++++++|+.+++-..++.|++||..++...............-
T Consensus       772 g~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG  851 (1057)
T PLN02919        772 GGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDG  851 (1057)
T ss_pred             CcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCC
Confidence            5422110             000        1123588999999988888999999999998776543221000000000


Q ss_pred             eeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCc
Q psy10662        124 SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH  164 (221)
Q Consensus       124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~  164 (221)
                      ....+.-.....++++++|+++++-+.++.|++||+.+++.
T Consensus       852 ~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        852 KALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             cccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            00122234577899999999999889999999999988765

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.04  E-value=4.2e-07  Score=69.01  Aligned_cols=171  Identities=9%  Similarity=0.022  Sum_probs=100.8

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCc--EEEecC---CCcEEEEEcCCCccceeeeccccceeEEEEeCCCC
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED--IVSAST---DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD   88 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--l~s~~~---d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~   88 (221)
                      .|.+=|.+  +...+.+... +......|+|++.  ++..+.   +..|.++|+.+++..... ...+......|+|||+
T Consensus       170 ~l~~~d~d--g~~~~~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt-~~~g~~~~~~~SPDG~  245 (419)
T PRK04043        170 NIVLADYT--LTYQKVIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA-SSQGMLVVSDVSKDGS  245 (419)
T ss_pred             eEEEECCC--CCceeEEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe-cCCCcEEeeEECCCCC
Confidence            45554554  3323334333 3778899998653  443333   456999999887654433 3445566788999998


Q ss_pred             EEE-EecCC--CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CC--eEEEEEcCCC
Q psy10662         89 YVA-CGSEN--NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLS  162 (221)
Q Consensus        89 ~l~-~~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~  162 (221)
                      .++ +.+.+  ..|.++|+..++...              +..+........|+|||+.|+-.+. .+  .|++.|+.++
T Consensus       246 ~la~~~~~~g~~~Iy~~dl~~g~~~~--------------LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g  311 (419)
T PRK04043        246 KLLLTMAPKGQPDIYLYDTNTKTLTQ--------------ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSG  311 (419)
T ss_pred             EEEEEEccCCCcEEEEEECCCCcEEE--------------cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            665 33333  467777877665321              1222222234579999987765553 33  5667777655


Q ss_pred             CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC---------CeEEEEECCccc
Q psy10662        163 KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ---------GIIKIYVIPIRV  220 (221)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iw~~~~~~  220 (221)
                      +.....              ..+.    ....|+|||++|+..+..         ..|.+.++.++.
T Consensus       312 ~~~rlt--------------~~g~----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~  360 (419)
T PRK04043        312 SVEQVV--------------FHGK----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY  360 (419)
T ss_pred             CeEeCc--------------cCCC----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC
Confidence            432111              0011    124899999988776543         367888887664

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.03  E-value=1.6e-07  Score=70.75  Aligned_cols=191  Identities=12%  Similarity=-0.005  Sum_probs=114.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce---
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK---   78 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v---   78 (221)
                      ++..+++++.+|.+..+|.. +++.+..... .+.+.+.....++.++.++.++.+..||.++++.+..+.......   
T Consensus       104 ~~~~v~v~~~~g~l~ald~~-tG~~~W~~~~-~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~  181 (377)
T TIGR03300       104 DGGLVFVGTEKGEVIALDAE-DGKELWRAKL-SSEVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLR  181 (377)
T ss_pred             cCCEEEEEcCCCEEEEEECC-CCcEeeeecc-CceeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeec
Confidence            45677888899999999987 6776665542 222322111135678888889999999999998876654322111   


Q ss_pred             --eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccce-eEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         79 --NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM-LESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        79 --~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                        .+....  +..++.+..++.+..+|.++++.+........... ....+....   ....+  .+..+++++.+|.++
T Consensus       182 ~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~---~~p~~--~~~~vy~~~~~g~l~  254 (377)
T TIGR03300       182 GSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVD---GDPVV--DGGQVYAVSYQGRVA  254 (377)
T ss_pred             CCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccC---CccEE--ECCEEEEEEcCCEEE
Confidence              111121  24677788889999999999987654321110000 000000000   00111  245777788899999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+|..+++.+-....             ..    .....  ..+..++.++.||.+..+|..+|+
T Consensus       255 a~d~~tG~~~W~~~~-------------~~----~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~  300 (377)
T TIGR03300       255 ALDLRSGRVLWKRDA-------------SS----YQGPA--VDDNRLYVTDADGVVVALDRRSGS  300 (377)
T ss_pred             EEECCCCcEEEeecc-------------CC----ccCce--EeCCEEEEECCCCeEEEEECCCCc
Confidence            999988875433220             00    11122  245677777889999999988775

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.02  E-value=1.9e-07  Score=77.11  Aligned_cols=187  Identities=12%  Similarity=0.191  Sum_probs=118.0

Q ss_pred             CCceEEEEeCCCeEEEE----EecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccc--------
Q psy10662          2 NSCHLAFGSADHCVHYY----DLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCL--------   68 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~--------   68 (221)
                      +...++.+..+|.|.+.    +..  ...+.....-...|.+++|||++. |+.+..++++.+.+-. .+++        
T Consensus        86 d~~~l~~~~~~Gdi~~~~~~~~~~--~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~-fd~i~E~~l~~~  162 (928)
T PF04762_consen   86 DSESLCIALASGDIILVREDPDPD--EDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRD-FDPISEVPLDSD  162 (928)
T ss_pred             CCCcEEEEECCceEEEEEccCCCC--CceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEecc-ceEEEEeecCcc
Confidence            55678888899999998    443  233444445677899999999655 6667778887776421 0000        


Q ss_pred             ----------------eeeec------------------------cccceeEEEEeCCCCEEEEecC---C---CeEEEE
Q psy10662         69 ----------------RSFVG------------------------HINDKNFVGLATDGDYVACGSE---N---NSLYIY  102 (221)
Q Consensus        69 ----------------~~~~~------------------------~~~~v~~~~~~~~~~~l~~~~~---d---~~v~iw  102 (221)
                                      ..|.+                        ....-..++|-.||.++|+.+-   .   ..++||
T Consensus       163 ~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy  242 (928)
T PF04762_consen  163 DFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVY  242 (928)
T ss_pred             ccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEE
Confidence                            00000                        2224467889999999988764   2   578899


Q ss_pred             ECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC---CCeEEEEEcCCCCceeeeeeecccccccc
Q psy10662        103 YKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE---NNSLYIYYKGLSKHMHAYRFDTVRSMLER  179 (221)
Q Consensus       103 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~~~~  179 (221)
                      +-+ |+...+             ...-.+--.+++|.|.|++||+.-.   ...|.+|.. +|-....|...        
T Consensus       243 ~Re-G~L~st-------------SE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~--------  299 (928)
T PF04762_consen  243 SRE-GELQST-------------SEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLR--------  299 (928)
T ss_pred             CCC-ceEEec-------------cccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecC--------
Confidence            754 332221             1112222346899999999998764   345666653 23222222211        


Q ss_pred             cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        180 DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       180 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                         .......|..+.|++|+..||..-.|. |.+|...+
T Consensus       300 ---~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~N  334 (928)
T PF04762_consen  300 ---FDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSN  334 (928)
T ss_pred             ---CCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeC
Confidence               113455789999999999999987665 99997754

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.00  E-value=6.8e-07  Score=62.85  Aligned_cols=148  Identities=18%  Similarity=0.145  Sum_probs=96.3

Q ss_pred             CCCeEEEEEecCCceeeEEEEec--cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCC
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGH--RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD   88 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~   88 (221)
                      .+|.|..||.. +++.+......  .....+.....++.+++++.++.+..||..+++.+..+.. ...+..... ..+.
T Consensus         1 ~~g~l~~~d~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~-~~~~   77 (238)
T PF13360_consen    1 DDGTLSALDPR-TGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAPV-VDGG   77 (238)
T ss_dssp             -TSEEEEEETT-TTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGEE-EETT
T ss_pred             CCCEEEEEECC-CCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-cccccceee-eccc
Confidence            36899999997 78877777531  1222222344678888889999999999999998877653 222222122 2345


Q ss_pred             EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeee
Q psy10662         89 YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY  168 (221)
Q Consensus        89 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~  168 (221)
                      .++.++.++.+..+|..+++.+.........        . ............+..++++..++.|..+|+++++.+..+
T Consensus        78 ~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~  148 (238)
T PF13360_consen   78 RVYVGTSDGSLYALDAKTGKVLWSIYLTSSP--------P-AGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKY  148 (238)
T ss_dssp             EEEEEETTSEEEEEETTTSCEEEEEEE-SSC--------T-CSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEE
T ss_pred             ccccccceeeeEecccCCcceeeeecccccc--------c-cccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEe
Confidence            5666668889999999999987763110000        0 001112222233778888888999999999999887766


Q ss_pred             ee
Q psy10662        169 RF  170 (221)
Q Consensus       169 ~~  170 (221)
                      ..
T Consensus       149 ~~  150 (238)
T PF13360_consen  149 PV  150 (238)
T ss_dssp             ES
T ss_pred             ec
Confidence            54

...

>KOG1912|consensus

Probab=99.00  E-value=1.6e-08  Score=78.64  Aligned_cols=111  Identities=16%  Similarity=0.194  Sum_probs=88.2

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-------C------cEEEecCCCcEEEEEcCCCccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-------E------DIVSASTDSQLKLWNINKPNCL   68 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~------~l~s~~~d~~v~~wd~~~~~~~   68 (221)
                      .+.++|.|+. ..|.+-|.. +.+.++.+..|...|+.+.|.|.       .      .|+++...|.|.+||...+..+
T Consensus        25 ~~GLiAygsh-slV~VVDs~-s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~  102 (1062)
T KOG1912|consen   25 PSGLIAYGSH-SLVSVVDSR-SLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVI  102 (1062)
T ss_pred             ccceEEEecC-ceEEEEehh-hhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhh
Confidence            3567787764 478889988 78889999999999999999851       1      2667777899999999999888


Q ss_pred             eeeeccccceeEEEEeCC---C-CEEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662         69 RSFVGHINDKNFVGLATD---G-DYVACGSENNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        69 ~~~~~~~~~v~~~~~~~~---~-~~l~~~~~d~~v~iwd~~~~~~~~~~~  114 (221)
                      ..+..|..++..++|-+.   . ..+++-.....+.+|+..+|+....+.
T Consensus       103 ~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~  152 (1062)
T KOG1912|consen  103 NWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYD  152 (1062)
T ss_pred             hhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccc
Confidence            888888899999999653   3 456666677789999998887765443

>KOG1275|consensus

Probab=98.98  E-value=7.2e-09  Score=81.76  Aligned_cols=144  Identities=13%  Similarity=0.173  Sum_probs=109.2

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecC---------CCcEEEEEcCCCccceeee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAST---------DSQLKLWNINKPNCLRSFV   72 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~---------d~~v~~wd~~~~~~~~~~~   72 (221)
                      +++.+.+|...|+|.+-|.. ..+.++++.+|.+.|..+... ++.|++|+.         |..|+|||++..+.+.-+.
T Consensus       186 Nnr~lf~G~t~G~V~LrD~~-s~~~iht~~aHs~siSDfDv~-GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~  263 (1118)
T KOG1275|consen  186 NNRNLFCGDTRGTVFLRDPN-SFETIHTFDAHSGSISDFDVQ-GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ  263 (1118)
T ss_pred             cCcEEEeecccceEEeecCC-cCceeeeeeccccceeeeecc-CCeEEEeecccccccccccchhhhhhhhhhhccCCcc
Confidence            56889999999999999998 789999999999999887654 667888764         6678999999877665554


Q ss_pred             ccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         73 GHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      -+.++ .-+.|+|.-. .+++++..|...+-|..+. .+...          ..........+..++++++++.++.|..
T Consensus       264 ~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~----------~~~v~p~~s~i~~fDiSsn~~alafgd~  332 (1118)
T KOG1275|consen  264 FPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAG----------VKMVNPNGSGISAFDISSNGDALAFGDH  332 (1118)
T ss_pred             cccCc-hhhhhcccccceEEEEecccceeeccccccCCCccc----------eeEEccCCCcceeEEecCCCceEEEecc
Confidence            44443 6678888643 5788888899998884321 11000          0112233445889999999999999999


Q ss_pred             CCeEEEEE
Q psy10662        151 NNSLYIYY  158 (221)
Q Consensus       151 d~~i~~~d  158 (221)
                      +|.|.+|.
T Consensus       333 ~g~v~~wa  340 (1118)
T KOG1275|consen  333 EGHVNLWA  340 (1118)
T ss_pred             cCcEeeec
Confidence            99999996

>KOG0309|consensus

Probab=98.96  E-value=5.8e-09  Score=80.68  Aligned_cols=189  Identities=13%  Similarity=0.134  Sum_probs=127.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC--ceEEEEEecC---Cc-EEEecCCCcEEEEEcCCC---ccceee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK--AVSYVKFLNK---ED-IVSASTDSQLKLWNINKP---NCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~--~i~~~~~~~~---~~-l~s~~~d~~v~~wd~~~~---~~~~~~   71 (221)
                      |-|+-+|.++.-| +.+.|+.....+.+-+. |..  .|....|+|.   .+ +++.+ ...-.+|++...   ..-..+
T Consensus        34 p~grdi~lAsr~g-l~i~dld~p~~ppr~l~-h~tpw~vad~qws~h~a~~~wiVsts-~qkaiiwnlA~ss~~aIef~l  110 (1081)
T KOG0309|consen   34 PSGRDIVLASRQG-LYIIDLDDPFTPPRWLH-HITPWQVADVQWSPHPAKPYWIVSTS-NQKAIIWNLAKSSSNAIEFVL  110 (1081)
T ss_pred             cccchhhhhhhcC-eEEEeccCCCCCceeee-ccCcchhcceecccCCCCceeEEecC-cchhhhhhhhcCCccceEEEE
Confidence            3455667776665 45667776666655555 433  4778888852   23 44444 444567888543   223345


Q ss_pred             eccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         72 VGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      .+|...|+.+.|+|+.. .+++++-|-.+..||+++......            .+..-......++|+-....+.+.+.
T Consensus       111 hghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~y------------s~~~w~s~asqVkwnyk~p~vlassh  178 (1081)
T KOG0309|consen  111 HGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFY------------STSSWRSAASQVKWNYKDPNVLASSH  178 (1081)
T ss_pred             ecCccceeccccCCCCCcceeeccccccceeeeccCCCccee------------eeecccccCceeeecccCcchhhhcc
Confidence            78899999999998765 689999999999999987643211            12222344556888764445566777


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEECCc
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+.|.+||++.+.....              .+++|...|+.+.|.. ....+.+.+.||++++|+...
T Consensus       179 g~~i~vwd~r~gs~pl~--------------s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k  233 (1081)
T KOG0309|consen  179 GNDIFVWDLRKGSTPLC--------------SLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK  233 (1081)
T ss_pred             CCceEEEeccCCCcceE--------------EecccceeeehHHHhhhhhhhhcccCCCCceeeecccc
Confidence            78899999987654321              2235777888888876 345678888999999999864

>KOG2066|consensus

Probab=98.94  E-value=1.2e-07  Score=74.07  Aligned_cols=144  Identities=12%  Similarity=0.057  Sum_probs=101.2

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC------CcEEEecCCCcEEEEEcCCC--ccceeeec
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK------EDIVSASTDSQLKLWNINKP--NCLRSFVG   73 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~l~s~~~d~~v~~wd~~~~--~~~~~~~~   73 (221)
                      +|.++++|+.||.|.|-.+. +.+...++. ...++.+++++|+      +++++|+.-| +.++.-+=.  +.-..+..
T Consensus        82 ~Gey~asCS~DGkv~I~sl~-~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~  158 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLF-TDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSE  158 (846)
T ss_pred             CCceEEEecCCCcEEEeecc-CCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeec
Confidence            58999999999999999987 445445554 5678999999985      5699999999 777653211  11113445


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      ..++|.++.|.  |+++|=+..+| |++||+.+.+.+..+.++....       ........+.|.++.++++  |...+
T Consensus       159 ~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~-------R~e~fpphl~W~~~~~LVI--GW~d~  226 (846)
T KOG2066|consen  159 GEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSV-------RPELFPPHLHWQDEDRLVI--GWGDS  226 (846)
T ss_pred             CccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCC-------CcccCCCceEecCCCeEEE--ecCCe
Confidence            67899999996  77999998888 9999999998887764443111       1122234577877665443  34446


Q ss_pred             EEEEEcC
Q psy10662        154 LYIYYKG  160 (221)
Q Consensus       154 i~~~d~~  160 (221)
                      |++..++
T Consensus       227 v~i~~I~  233 (846)
T KOG2066|consen  227 VKICSIK  233 (846)
T ss_pred             EEEEEEe
Confidence            8887776

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.92  E-value=3.7e-07  Score=75.37  Aligned_cols=202  Identities=12%  Similarity=0.107  Sum_probs=117.7

Q ss_pred             CCceEEEEeC---C---CeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecC----CCcEEEEEcCCCccceee
Q psy10662          2 NSCHLAFGSA---D---HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAST----DSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         2 ~~~~l~~~~~---d---g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~----d~~v~~wd~~~~~~~~~~   71 (221)
                      ||.++|+.+.   .   ..++||+-+  +....+-+.-.+--.+++|.|.+.++++..    ...|.+|. ++|..-..|
T Consensus       220 DG~yFAVss~~~~~~~~R~iRVy~Re--G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF  296 (928)
T PF04762_consen  220 DGEYFAVSSVEPETGSRRVIRVYSRE--GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEF  296 (928)
T ss_pred             CCcEEEEEEEEcCCCceeEEEEECCC--ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeE
Confidence            7889988775   2   478999865  554444333333446788999766555443    34566666 344333333


Q ss_pred             e----ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE-EeeCceEEEEEecC-CCEE
Q psy10662         72 V----GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV-GHINDKNFVGLATD-GDYV  145 (221)
Q Consensus        72 ~----~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l  145 (221)
                      .    .....|..+.|++++..||..-.|. |.+|-......-..           +.+. .....+..+.|+|. ...|
T Consensus       297 ~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLK-----------qei~~~~~~~~~~~~Wdpe~p~~L  364 (928)
T PF04762_consen  297 TLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLK-----------QEIRFSSSESVNFVKWDPEKPLRL  364 (928)
T ss_pred             ecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEE-----------EEEEccCCCCCCceEECCCCCCEE
Confidence            2    3355799999999999999877665 99997665443111           1111 11223444888873 4456


Q ss_pred             EEecCCCeEEEEEcC----CCCce------eeeeeeccccccc---------cccc-ccccccceeEEEEcCCCcEEEEe
Q psy10662        146 ACGSENNSLYIYYKG----LSKHM------HAYRFDTVRSMLE---------RDRN-EDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~----~~~~~------~~~~~~~~~~~~~---------~~~~-~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                      ...+.+|.+..++..    .+...      ...-.+...-.+.         +... .-....+|.+++|++++..+++-
T Consensus       365 ~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl  444 (928)
T PF04762_consen  365 HVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVL  444 (928)
T ss_pred             EEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEE
Confidence            666665666554432    11100      0000111110000         0000 01235679999999999889999


Q ss_pred             cCCCeEEEEECCc
Q psy10662        206 NSQGIIKIYVIPI  218 (221)
Q Consensus       206 ~~dg~i~iw~~~~  218 (221)
                      ..||.|.+|....
T Consensus       445 ~~d~~l~~~~~~~  457 (928)
T PF04762_consen  445 TSDGSLSIYEWDL  457 (928)
T ss_pred             ECCCCEEEEEecC
Confidence            9999999999654

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.90  E-value=5.6e-06  Score=58.60  Aligned_cols=176  Identities=9%  Similarity=0.063  Sum_probs=104.6

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEecCCcEEEecC-C--------CcEEEEEcCCCccce
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLNKEDIVSAST-D--------SQLKLWNINKPNCLR   69 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~s~~~-d--------~~v~~wd~~~~~~~~   69 (221)
                      ..|+.+...+ +.++|+. +++.......     .....+.+++.|++.|..+.. .        |.|..++.. ++...
T Consensus        52 g~l~v~~~~~-~~~~d~~-~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~  128 (246)
T PF08450_consen   52 GRLYVADSGG-IAVVDPD-TGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV  128 (246)
T ss_dssp             SEEEEEETTC-EEEEETT-TTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE
T ss_pred             CEEEEEEcCc-eEEEecC-CCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEE
Confidence            3444554544 4556877 5543333332     234578899998776555432 2        456667765 44333


Q ss_pred             eeeccccceeEEEEeCCCCEE-EEecCCCeEEEEECCCCee-eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         70 SFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        70 ~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                       ....-...+.++|+|+++.| ++-+..+.|..+++..... +...       .....+....+....++++.+|++.++
T Consensus       129 -~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~g~pDG~~vD~~G~l~va  200 (246)
T PF08450_consen  129 -VADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNR-------RVFIDFPGGPGYPDGLAVDSDGNLWVA  200 (246)
T ss_dssp             -EEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEE-------EEEEE-SSSSCEEEEEEEBTTS-EEEE
T ss_pred             -EecCcccccceEECCcchheeecccccceeEEEeccccccceeee-------eeEEEcCCCCcCCCcceEcCCCCEEEE
Confidence             32334556899999999866 4667788899888753222 1110       001111111234778999999998888


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE-cCCCcEEEEec
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW-RQLSRVLVAAN  206 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~  206 (221)
                      ....+.|.+++.+ ++.+..+...               ...+++++| -++.+.|+..+
T Consensus       201 ~~~~~~I~~~~p~-G~~~~~i~~p---------------~~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  201 DWGGGRIVVFDPD-GKLLREIELP---------------VPRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             EETTTEEEEEETT-SCEEEEEE-S---------------SSSEEEEEEESTTSSEEEEEE
T ss_pred             EcCCCEEEEECCC-ccEEEEEcCC---------------CCCEEEEEEECCCCCEEEEEe
Confidence            8888999999977 7766666421               235789999 46666665443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.90  E-value=2.6e-08  Score=69.74  Aligned_cols=183  Identities=10%  Similarity=0.119  Sum_probs=110.1

Q ss_pred             EeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccc---eeeecc-----ccceeEEEEeCCCC-EEEEecCCCeEEE
Q psy10662         31 KGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL---RSFVGH-----INDKNFVGLATDGD-YVACGSENNSLYI  101 (221)
Q Consensus        31 ~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~---~~~~~~-----~~~v~~~~~~~~~~-~l~~~~~d~~v~i  101 (221)
                      .+|.-.|.++.|+.+...+..+.|=.|.+|+++-...-   ..+++|     ...|++..|+|... .+...+..|.|++
T Consensus       169 NaH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl  248 (460)
T COG5170         169 NAHPYHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKL  248 (460)
T ss_pred             ccceeEeeeeeecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEe
Confidence            34666788999987777666678889999998654322   223333     23588999999754 5667778899999


Q ss_pred             EECCCCeeeEE---EEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC-ceeeeeeecccccc
Q psy10662        102 YYKGLSKHMHA---YRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK-HMHAYRFDTVRSML  177 (221)
Q Consensus       102 wd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~  177 (221)
                      -|++.......   +.-....+....-+.+-...|..+.|+++|++|++-+. -++++||.+..+ ++.++.....-  .
T Consensus       249 ~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l--~  325 (460)
T COG5170         249 NDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDL--M  325 (460)
T ss_pred             hhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHH--H
Confidence            99984322100   00000111111122334566788999999999997654 579999998654 34444321110  0


Q ss_pred             cccccccccccce---eEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        178 ERDRNEDDTNEFV---SAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       178 ~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ..+... -....|   ..+.|+-|.+.+.+|+..+..-+|-..
T Consensus       326 ~~l~d~-YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~  367 (460)
T COG5170         326 DELNDV-YENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTD  367 (460)
T ss_pred             HHHHhh-hhccceeeeEEEEecCCcccccccccccceeeeccc
Confidence            000000 001112   347788888888888887777776543

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.86  E-value=1.2e-06  Score=65.32  Aligned_cols=176  Identities=11%  Similarity=0.052  Sum_probs=110.8

Q ss_pred             eCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEE-e---c-------CCCcEEEEEcCCCccceeeeccccc
Q psy10662         10 SADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVS-A---S-------TDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus        10 ~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s-~---~-------~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      ...+.+++|.+. .+..+.+-.-.+..=..+.|++. .+|+. .   .       ....+++++++... +.......++
T Consensus       199 ~kpa~~~i~sIp-~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~~~p  276 (561)
T COG5354         199 NKPAMVRILSIP-KNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDLKDP  276 (561)
T ss_pred             CCCcEEEEEEcc-CCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc-cceecccccc
Confidence            345677777776 44444433322333345677763 33221 1   1       12457888886433 3333356889


Q ss_pred             eeEEEEeCCCCEEEE--ecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC---C
Q psy10662         78 KNFVGLATDGDYVAC--GSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN---N  152 (221)
Q Consensus        78 v~~~~~~~~~~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~  152 (221)
                      |...+|.|.++.+++  |-.+..+.++|++.. ..               +......-+.+-|+|.+++++.++.|   |
T Consensus       277 Vhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~---------------~~~Pe~~rNT~~fsp~~r~il~agF~nl~g  340 (561)
T COG5354         277 VHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LR---------------FYFPEQKRNTIFFSPHERYILFAGFDNLQG  340 (561)
T ss_pred             ceeeeecccCCceeEEecccccceeecccccc-eE---------------EecCCcccccccccCcccEEEEecCCcccc
Confidence            999999999887654  456788999998865 21               12233444567899999999997765   6


Q ss_pred             eEEEEEcCCCCcee-eeeeecccccccccccccccccceeEEEEcCCCcEEEEec------CCCeEEEEECCccc
Q psy10662        153 SLYIYYKGLSKHMH-AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN------SQGIIKIYVIPIRV  220 (221)
Q Consensus       153 ~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~iw~~~~~~  220 (221)
                      .+-+||........ .+.               +  ....-+.|+||++++.+..      .|..|++|++...+
T Consensus       341 ni~i~~~~~rf~~~~~~~---------------~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~  398 (561)
T COG5354         341 NIEIFDPAGRFKVAGAFN---------------G--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK  398 (561)
T ss_pred             ceEEeccCCceEEEEEee---------------c--CCceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence            78899865432221 121               1  1234578999999988765      38889999997654

>KOG2114|consensus

Probab=98.86  E-value=6.5e-07  Score=70.68  Aligned_cols=193  Identities=18%  Similarity=0.246  Sum_probs=121.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCc-eEEEEEecC-CcEEEecCCCc-----EEEEEcCCC------cc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKA-VSYVKFLNK-EDIVSASTDSQ-----LKLWNINKP------NC   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~-i~~~~~~~~-~~l~s~~~d~~-----v~~wd~~~~------~~   67 (221)
                      +++..++.|+.+|.|.+++-  ..+.++.++++... |..+...++ ..|++.+.|+.     +++|+++..      .+
T Consensus        33 s~~~~vvigt~~G~V~~Ln~--s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c  110 (933)
T KOG2114|consen   33 SSTGSVVIGTADGRVVILNS--SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQC  110 (933)
T ss_pred             CCCceEEEeeccccEEEecc--cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcce
Confidence            45678899999998887764  35666888888777 444433343 46888777654     899999643      23


Q ss_pred             ce--eeec-----cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         68 LR--SFVG-----HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        68 ~~--~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                      +.  .+.+     ...++.+++.+.+-+.+|+|-.+|.|..+.-.   ..+.      .+....-......+|+.+++..
T Consensus       111 ~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GD---i~RD------rgsr~~~~~~~~~pITgL~~~~  181 (933)
T KOG2114|consen  111 LYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGD---ILRD------RGSRQDYSHRGKEPITGLALRS  181 (933)
T ss_pred             eeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCc---chhc------cccceeeeccCCCCceeeEEec
Confidence            31  1122     24578899999998899999999999887321   1110      0001111233457899999988


Q ss_pred             CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        141 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       141 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      +++.++-......|.+|.+....+              ....+..|...+++..|++....+++++. ..+.+|+.+..
T Consensus       182 d~~s~lFv~Tt~~V~~y~l~gr~p--------------~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~  245 (933)
T KOG2114|consen  182 DGKSVLFVATTEQVMLYSLSGRTP--------------SLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGR  245 (933)
T ss_pred             CCceeEEEEecceeEEEEecCCCc--------------ceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCc
Confidence            887632233345688888763221              11123456777888888875553555443 35788877643

>KOG2041|consensus

Probab=98.83  E-value=5e-08  Score=75.59  Aligned_cols=131  Identities=9%  Similarity=0.135  Sum_probs=96.7

Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe--ecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF--DTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      .....|+.|+.+..++++|+.||.+++..+.+...-....-  ...+-..-+++.+|...|..+.|+.+.+.|.++..+|
T Consensus        14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G   93 (1189)
T KOG2041|consen   14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG   93 (1189)
T ss_pred             CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence            34678999999999999999999999998765433221111  1222233457889999999999999999999999999


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .|.+|=+-.+......             ......+.|.+++|+.||..++..-.||.|.+=.++.
T Consensus        94 lIiVWmlykgsW~EEM-------------iNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdG  146 (1189)
T KOG2041|consen   94 LIIVWMLYKGSWCEEM-------------INNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDG  146 (1189)
T ss_pred             eEEEEeeecccHHHHH-------------hhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecc
Confidence            9999977554432111             1123455789999999999998888888877655543

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.81  E-value=1.3e-05  Score=57.19  Aligned_cols=207  Identities=11%  Similarity=0.115  Sum_probs=121.4

Q ss_pred             CCceEEEEeCCC-eEEEEEecCCceeeEEEEeccCce--EEEEEecCCc-EEEe-----cCCCcEEEEEcC-CCccceee
Q psy10662          2 NSCHLAFGSADH-CVHYYDLRNTKEALAVFKGHRKAV--SYVKFLNKED-IVSA-----STDSQLKLWNIN-KPNCLRSF   71 (221)
Q Consensus         2 ~~~~l~~~~~dg-~i~i~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~-l~s~-----~~d~~v~~wd~~-~~~~~~~~   71 (221)
                      ++..++.+-.-| ...+||.. +++....+....+.-  ---.|++++. |++.     ...|.|-|||.. +.+.+.++
T Consensus        16 ~~~avafaRRPG~~~~v~D~~-~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~   94 (305)
T PF07433_consen   16 RPEAVAFARRPGTFALVFDCR-TGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEF   94 (305)
T ss_pred             CCeEEEEEeCCCcEEEEEEcC-CCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEe
Confidence            345666676666 46688987 666666554433321  1346887555 5554     335789999998 56777777


Q ss_pred             eccccceeEEEEeCCCCEEEEec-------CCCeEEEEECCCCeeeEEEEeecccceeEee--E--EEeeCceEEEEEec
Q psy10662         72 VGHINDKNFVGLATDGDYVACGS-------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESS--F--VGHINDKNFVGLAT  140 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~~~~l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~v~~~~~~~  140 (221)
                      ..|.-.-..+.+.|+++.|+.+-       +.|..++ ++.+.++--.+ .+..++..+.+  +  .-|...+.-+++.+
T Consensus        95 ~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kL-Nl~tM~psL~~-ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~  172 (305)
T PF07433_consen   95 PSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKL-NLDTMQPSLVY-LDARSGALLEQVELPPDLHQLSIRHLAVDG  172 (305)
T ss_pred             cCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceec-ChhhcCCceEE-EecCCCceeeeeecCccccccceeeEEecC
Confidence            76655667888999997665542       1233332 33333332222 23444444433  3  33667889999999


Q ss_pred             CCCEEEEecCCCe-------EEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEE
Q psy10662        141 DGDYVACGSENNS-------LYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIK  212 (221)
Q Consensus       141 ~~~~l~~~~~d~~-------i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~  212 (221)
                      +|..++..-..|.       +.+++.  ++.+..+...        ......-...+-++++++++.++++.+ ..|.+.
T Consensus       173 ~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p--------~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~  242 (305)
T PF07433_consen  173 DGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAP--------EEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVA  242 (305)
T ss_pred             CCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCC--------hHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEE
Confidence            9876665443321       222221  1111111110        001112345688999999998886665 688999


Q ss_pred             EEECCcccC
Q psy10662        213 IYVIPIRVL  221 (221)
Q Consensus       213 iw~~~~~~l  221 (221)
                      +||..++.+
T Consensus       243 ~~d~~tg~~  251 (305)
T PF07433_consen  243 VWDAATGRL  251 (305)
T ss_pred             EEECCCCCE
Confidence            999998764

>KOG1832|consensus

Probab=98.78  E-value=2.1e-09  Score=84.72  Aligned_cols=178  Identities=14%  Similarity=0.222  Sum_probs=119.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEec-C-CCcEEEEEcCC-Cccceeeeccccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSAS-T-DSQLKLWNINK-PNCLRSFVGHIND   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~-~-d~~v~~wd~~~-~~~~~~~~~~~~~   77 (221)
                      +.++|++|+..|.|++|++. ++........|.++|+-+.-+- +..+++.+ . ..-..+|++.. +.+..++.    .
T Consensus      1112 ~~~hL~vG~~~Geik~~nv~-sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~----e 1186 (1516)
T KOG1832|consen 1112 GTNHLAVGSHAGEIKIFNVS-SGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFD----E 1186 (1516)
T ss_pred             CCceEEeeeccceEEEEEcc-CccccccccccccccccccccCCcceeeeeccccCchHHHhccccccCcccccc----c
Confidence            35789999999999999998 7888888999999999998874 44444333 3 33678999864 44444443    3


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      -.++.|+.....-+.|+......+||++++.++.++--+         ..+....-++..|+|+..+++   .||  .+|
T Consensus      1187 d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~---------~~~~~y~~n~a~FsP~D~LIl---ndG--vLW 1252 (1516)
T KOG1832|consen 1187 DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTD---------TVTSSYSNNLAHFSPCDTLIL---NDG--VLW 1252 (1516)
T ss_pred             cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCc---------chhhhhhccccccCCCcceEe---eCc--eee
Confidence            467888766554455655567899999999887664111         112222336788999988887   455  379


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      |.+..+.+..|+               ..+ .-..-.|+|.|.-++..+     .|||+++-
T Consensus      1253 DvR~~~aIh~FD---------------~ft-~~~~G~FHP~g~eVIINS-----EIwD~RTF 1293 (1516)
T KOG1832|consen 1253 DVRIPEAIHRFD---------------QFT-DYGGGGFHPSGNEVIINS-----EIWDMRTF 1293 (1516)
T ss_pred             eeccHHHHhhhh---------------hhe-ecccccccCCCceEEeec-----hhhhhHHH
Confidence            998776655543               111 111235788888777765     46776653

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.75  E-value=2.9e-07  Score=69.82  Aligned_cols=75  Identities=13%  Similarity=0.247  Sum_probs=61.5

Q ss_pred             EeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        128 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       128 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      .....+.+++++|+...++.|+.||.|.+||...+.....                 ...-.++.++|+|+|.++++|+.
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-----------------ka~~~P~~iaWHp~gai~~V~s~  319 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-----------------KAEFIPTLIAWHPDGAIFVVGSE  319 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-----------------eecccceEEEEcCCCcEEEEEcC
Confidence            5567899999999999999999999999999866532211                 12234678999999999999999


Q ss_pred             CCeEEEEECCcc
Q psy10662        208 QGIIKIYVIPIR  219 (221)
Q Consensus       208 dg~i~iw~~~~~  219 (221)
                      .|.+.+||+.-.
T Consensus       320 qGelQ~FD~ALs  331 (545)
T PF11768_consen  320 QGELQCFDMALS  331 (545)
T ss_pred             CceEEEEEeecC
Confidence            999999998643

>KOG1832|consensus

Probab=98.75  E-value=1.2e-08  Score=80.76  Aligned_cols=162  Identities=14%  Similarity=0.254  Sum_probs=118.3

Q ss_pred             eeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCC--eEEE
Q psy10662         25 EALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENN--SLYI  101 (221)
Q Consensus        25 ~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~i  101 (221)
                      +..++++.|....+|++|+ ..++|+.|+..|.|++|++.+|.......+|.++|+.+.-+.+|..+++.+.-.  ...+
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHH
Confidence            4556778888999999999 467899999999999999999999989999999999999999998766554432  4678


Q ss_pred             EECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccc
Q psy10662        102 YYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERD  180 (221)
Q Consensus       102 wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~  180 (221)
                      |++.+ +.+.+++                 ..-.++.|+..-+.-+.|+......+||+++...+..+--...       
T Consensus      1172 W~~~s~~~~~Hsf-----------------~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~------- 1227 (1516)
T KOG1832|consen 1172 WDASSTGGPRHSF-----------------DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTV------- 1227 (1516)
T ss_pred             hccccccCccccc-----------------cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcch-------
Confidence            98764 2222221                 2345688887666666677777899999999887766421111       


Q ss_pred             ccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        181 RNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       181 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                          +....-+.+.|+|+..+++-   ||  .+||++..
T Consensus      1228 ----~~~y~~n~a~FsP~D~LIln---dG--vLWDvR~~ 1257 (1516)
T KOG1832|consen 1228 ----TSSYSNNLAHFSPCDTLILN---DG--VLWDVRIP 1257 (1516)
T ss_pred             ----hhhhhccccccCCCcceEee---Cc--eeeeeccH
Confidence                11112266889999887764   55  57988753

>KOG1645|consensus

Probab=98.75  E-value=2.6e-07  Score=66.84  Aligned_cols=91  Identities=13%  Similarity=0.160  Sum_probs=71.3

Q ss_pred             EEEEEecCCceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCC-EEE
Q psy10662         15 VHYYDLRNTKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD-YVA   91 (221)
Q Consensus        15 i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~   91 (221)
                      +++.+.. +.+....+..|...|..++|+|.  +.+..++.+..|++.|+++...+..+..+ ..+++++|.-+.. ++.
T Consensus       175 v~~l~~~-~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IY  252 (463)
T KOG1645|consen  175 VQKLESH-DFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIY  252 (463)
T ss_pred             eEEeccC-CcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeE
Confidence            4444443 33444556677788999999983  45889999999999999999888888766 7899999987655 677


Q ss_pred             EecCCCeEEEEECCCC
Q psy10662         92 CGSENNSLYIYYKGLS  107 (221)
Q Consensus        92 ~~~~d~~v~iwd~~~~  107 (221)
                      +|-.+|.|.|||++..
T Consensus       253 aGl~nG~VlvyD~R~~  268 (463)
T KOG1645|consen  253 AGLQNGMVLVYDMRQP  268 (463)
T ss_pred             EeccCceEEEEEccCC
Confidence            7888999999998765

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.74  E-value=8.9e-06  Score=58.05  Aligned_cols=160  Identities=9%  Similarity=0.073  Sum_probs=103.6

Q ss_pred             CCCceEEEEeC-----CCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEec------------------CCCc
Q psy10662          1 MNSCHLAFGSA-----DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAS------------------TDSQ   56 (221)
Q Consensus         1 ~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~------------------~d~~   56 (221)
                      |||++|.+.-.     .|.|-|||.....+.+.++..|.-.-..+.+.|++ .|+.+-                  .+..
T Consensus        60 ~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~ps  139 (305)
T PF07433_consen   60 PDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPS  139 (305)
T ss_pred             CCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCc
Confidence            57888887533     57899999986677888888777667788888866 455441                  1234


Q ss_pred             EEEEEcCCCcccee--e--eccccceeEEEEeCCCCEEEEecCCCe-------EEEEECCCCeeeEEEEeecccceeEee
Q psy10662         57 LKLWNINKPNCLRS--F--VGHINDKNFVGLATDGDYVACGSENNS-------LYIYYKGLSKHMHAYRFDTVRSMLESS  125 (221)
Q Consensus        57 v~~wd~~~~~~~~~--~--~~~~~~v~~~~~~~~~~~l~~~~~d~~-------v~iwd~~~~~~~~~~~~~~~~~~~~~~  125 (221)
                      +...|..+++.+..  +  ..|...|..+++.++|..++..-..|.       |-+++  .++.+..+....      ..
T Consensus       140 L~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~------~~  211 (305)
T PF07433_consen  140 LVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPE------EQ  211 (305)
T ss_pred             eEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCCh------HH
Confidence            55566677776655  3  236668999999999876665543331       22222  222222211100      01


Q ss_pred             EEEeeCceEEEEEecCCCEEE-EecCCCeEEEEEcCCCCceeee
Q psy10662        126 FVGHINDKNFVGLATDGDYVA-CGSENNSLYIYYKGLSKHMHAY  168 (221)
Q Consensus       126 ~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~  168 (221)
                      ...-.+.+-+|++++++.+++ ++-..+.+.+||..++..+...
T Consensus       212 ~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~  255 (305)
T PF07433_consen  212 WRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSV  255 (305)
T ss_pred             HHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecc
Confidence            123456788999999998775 5557789999999998876554

>KOG2314|consensus

Probab=98.73  E-value=8.9e-06  Score=61.61  Aligned_cols=203  Identities=13%  Similarity=0.113  Sum_probs=114.9

Q ss_pred             CCCceEEEEeC-----------CCeEEEEEecCCceeeEEEEeccC--ce-EEEEEecCCcEEEecCCCcEEEEEcCCCc
Q psy10662          1 MNSCHLAFGSA-----------DHCVHYYDLRNTKEALAVFKGHRK--AV-SYVKFLNKEDIVSASTDSQLKLWNINKPN   66 (221)
Q Consensus         1 ~~~~~l~~~~~-----------dg~i~i~~~~~~~~~~~~~~~~~~--~i-~~~~~~~~~~l~s~~~d~~v~~wd~~~~~   66 (221)
                      |+.++|+|-+.           ...++|||+. ++...+.+...++  .+ .-..||-++.+++.-....|.||+..+-.
T Consensus       259 P~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~-tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~  337 (698)
T KOG2314|consen  259 PNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA-TGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFM  337 (698)
T ss_pred             CccceEEEecCCccccCcccCCCceEEEEEcc-ccchhcceeccCCCccccceEEeccCCceeEEeccceEEEEecCcee
Confidence            55667776543           2579999999 7887777775333  23 23567755444444444789999876533


Q ss_pred             cceeeeccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeEEEE----------eecccc-----------
Q psy10662         67 CLRSFVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYR----------FDTVRS-----------  120 (221)
Q Consensus        67 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~----------~~~~~~-----------  120 (221)
                      ++-.-.-.-..|....|+|.++.||-=...     ..+.+-.+-+.+.+++.+          |.....           
T Consensus       338 lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK  417 (698)
T KOG2314|consen  338 LLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTK  417 (698)
T ss_pred             eecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeecc
Confidence            221111123467888888888777643321     234454544444444332          110000           


Q ss_pred             ---------eeEeeE---------EEeeCceEEEEEecCCCEEEEecC---CCeEEEEEcCCCCceeeeeeecccccccc
Q psy10662        121 ---------MLESSF---------VGHINDKNFVGLATDGDYVACGSE---NNSLYIYYKGLSKHMHAYRFDTVRSMLER  179 (221)
Q Consensus       121 ---------~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~~~~  179 (221)
                               ..+..+         ..-...|...+|-|.|+.+++-+.   ..++.+|-.++...           ....
T Consensus       418 ~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~-----------~~~l  486 (698)
T KOG2314|consen  418 SKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIK-----------KPSL  486 (698)
T ss_pred             ccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCC-----------chhh
Confidence                     000111         122345667789999987665443   34677776653211           1111


Q ss_pred             cccccccccceeEEEEcCCCcEEEEec---CCCeEEEEECC
Q psy10662        180 DRNEDDTNEFVSAVCWRQLSRVLVAAN---SQGIIKIYVIP  217 (221)
Q Consensus       180 ~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iw~~~  217 (221)
                      +..+.  ....+.+.|+|.|++++.+.   ..|.+.++|..
T Consensus       487 Vk~~d--k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~  525 (698)
T KOG2314|consen  487 VKELD--KKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTD  525 (698)
T ss_pred             hhhhc--ccccceEEEcCCCcEEEEEEecccccceEEEecc
Confidence            11111  13467899999999988765   47889999876

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.72  E-value=5.6e-06  Score=61.91  Aligned_cols=185  Identities=12%  Similarity=0.057  Sum_probs=111.3

Q ss_pred             eEEEEEecCCceeeEEEEeccCc--eE-EEEEec-CCcEEEecCCCcEEEEEcCCCccce-eeecc-ccceeEEEEeCCC
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKA--VS-YVKFLN-KEDIVSASTDSQLKLWNINKPNCLR-SFVGH-INDKNFVGLATDG   87 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~--i~-~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~-~~~~~-~~~v~~~~~~~~~   87 (221)
                      .+.+||.. ++..+..+.....+  .+ -+.|+- +.+++-. ....++++++ ++.... .+... ...+....|+|.+
T Consensus       109 ~~~vwd~~-sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~  185 (561)
T COG5354         109 NVFVWDIA-SGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEG  185 (561)
T ss_pred             ceeEEecc-CceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhccccceeeEEecCCC
Confidence            59999998 78888888776665  55 677874 4443322 4567999997 332211 11111 2457888888875


Q ss_pred             C--EEEE-----ecCCCeEEEEECCCCeeeEEEE----------eecccce---------------------eE------
Q psy10662         88 D--YVAC-----GSENNSLYIYYKGLSKHMHAYR----------FDTVRSM---------------------LE------  123 (221)
Q Consensus        88 ~--~l~~-----~~~d~~v~iwd~~~~~~~~~~~----------~~~~~~~---------------------~~------  123 (221)
                      +  .|+.     ....+.+++|.+..++.+.+..          |+.....                     .+      
T Consensus       186 n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~  265 (561)
T COG5354         186 NHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITER  265 (561)
T ss_pred             CCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccc
Confidence            4  3332     4567889999887666555433          2111000                     00      


Q ss_pred             --eeEEEeeCceEEEEEecCCCEEEEe--cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC
Q psy10662        124 --SSFVGHINDKNFVGLATDGDYVACG--SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       124 --~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  199 (221)
                        .......++|..++|.|.++.+++.  -.+-.+.++|++.. ..+.+                 ....=+.+.|+|.+
T Consensus       266 ~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~-----------------Pe~~rNT~~fsp~~  327 (561)
T COG5354         266 SIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF-----------------PEQKRNTIFFSPHE  327 (561)
T ss_pred             ccceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEec-----------------CCcccccccccCcc
Confidence              0011336778899999988766554  47788899988765 11111                 12233456777877


Q ss_pred             cEEEEecC---CCeEEEEECCcc
Q psy10662        200 RVLVAANS---QGIIKIYVIPIR  219 (221)
Q Consensus       200 ~~l~~~~~---dg~i~iw~~~~~  219 (221)
                      ++++.++-   -|.|.+|+...+
T Consensus       328 r~il~agF~nl~gni~i~~~~~r  350 (561)
T COG5354         328 RYILFAGFDNLQGNIEIFDPAGR  350 (561)
T ss_pred             cEEEEecCCccccceEEeccCCc
Confidence            77777654   456777776554

>KOG3617|consensus

Probab=98.70  E-value=1.1e-06  Score=69.72  Aligned_cols=102  Identities=11%  Similarity=-0.006  Sum_probs=75.0

Q ss_pred             CCCceEEEEeC----CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662          1 MNSCHLAFGSA----DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~----dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      |...++|+++.    .|.|.||--  ++++.+-.. ..-.+++++|+|... |+.|-.-|.+.+|...+.+.-.....|+
T Consensus        25 PsePlfAVA~fS~er~GSVtIfad--tGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~  101 (1416)
T KOG3617|consen   25 PSEPLFAVASFSPERGGSVTIFAD--TGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHP  101 (1416)
T ss_pred             CCCceeEEEEecCCCCceEEEEec--CCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCC
Confidence            34456666654    477887753  344333221 122367799999766 6777788999999987766555556799


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECC
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKG  105 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~  105 (221)
                      .+|..+.|+|+|..++++..-|.|.+|...
T Consensus       102 a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen  102 APIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             CCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            999999999999999999999999999764

>KOG2314|consensus

Probab=98.70  E-value=4.2e-07  Score=68.47  Aligned_cols=155  Identities=15%  Similarity=0.226  Sum_probs=102.5

Q ss_pred             eEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecC-----------CCeEEEEECC
Q psy10662         37 VSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSE-----------NNSLYIYYKG  105 (221)
Q Consensus        37 i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------d~~v~iwd~~  105 (221)
                      =+-+.|||-+..++.-...-|.+|--.+-..++.+. |.+ |..+.|||+.+||++-+.           ...+.|||++
T Consensus       213 etyv~wSP~GTYL~t~Hk~GI~lWGG~~f~r~~RF~-Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~  290 (698)
T KOG2314|consen  213 ETYVRWSPKGTYLVTFHKQGIALWGGESFDRIQRFY-HPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA  290 (698)
T ss_pred             eeeEEecCCceEEEEEeccceeeecCccHHHHHhcc-CCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence            467899996655544555568899877767776664 554 899999999999998653           2579999999


Q ss_pred             CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccc
Q psy10662        106 LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD  185 (221)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (221)
                      +|...+.+..          +......-.-+.||.|++++|.-.. ..|.||+..+-..+   +            .-.-
T Consensus       291 tG~lkrsF~~----------~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~ll---d------------~Ksl  344 (698)
T KOG2314|consen  291 TGLLKRSFPV----------IKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLL---D------------KKSL  344 (698)
T ss_pred             ccchhcceec----------cCCCccccceEEeccCCceeEEecc-ceEEEEecCceeee---c------------cccc
Confidence            9988877621          1111222335789999999997766 46889876542221   1            0001


Q ss_pred             cccceeEEEEcCCCcEEEEecC-----CCeEEEEECCcc
Q psy10662        186 TNEFVSAVCWRQLSRVLVAANS-----QGIIKIYVIPIR  219 (221)
Q Consensus       186 ~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iw~~~~~  219 (221)
                      .-..|....|+|.+++||--+.     -..+.+-.++++
T Consensus       345 ki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~  383 (698)
T KOG2314|consen  345 KISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSK  383 (698)
T ss_pred             CCccccCcccCCCcceEEEEcccccCCcceEEEEecCcc
Confidence            2345788899999888876543     124555555543

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.68  E-value=9.6e-06  Score=61.55  Aligned_cols=178  Identities=10%  Similarity=0.078  Sum_probs=91.7

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCc------cceeeeccccceeEEEEeCCC
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN------CLRSFVGHINDKNFVGLATDG   87 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~------~~~~~~~~~~~v~~~~~~~~~   87 (221)
                      .|+||+..  ++++..+.-..+.|.++.|..+..|+....||.+++||+....      .+....-....+....+..+|
T Consensus        62 ~I~iys~s--G~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G  139 (410)
T PF04841_consen   62 SIQIYSSS--GKLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNG  139 (410)
T ss_pred             EEEEECCC--CCEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCC
Confidence            58888865  6666666655589999999988889999999999999986333      111111111222222333344


Q ss_pred             CEEEEecCCCeEEEEE-CCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCcee
Q psy10662         88 DYVACGSENNSLYIYY-KGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH  166 (221)
Q Consensus        88 ~~l~~~~~d~~v~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~  166 (221)
                        ++.-..++.+.+.. .......+.+. +  ...................++.+....+....++.+.+.+-...+.  
T Consensus       140 --ivvLt~~~~~~~v~n~~~~~~~~~~~-~--~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~--  212 (410)
T PF04841_consen  140 --IVVLTGNNRFYVVNNIDEPVKLRRLP-E--IPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ--  212 (410)
T ss_pred             --EEEECCCCeEEEEeCccccchhhccc-c--CCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc--
Confidence              22223344444332 22110111100 0  0000000000111000123344444444444555555433211100  


Q ss_pred             eeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        167 AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                                      . ...+++..++.||+|++||.-..+|.+.+.+..
T Consensus       213 ----------------i-~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssD  246 (410)
T PF04841_consen  213 ----------------I-DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSD  246 (410)
T ss_pred             ----------------c-cCCCCeEEEEECCCCCEEEEEECCCCEEEEECc
Confidence                            0 123468899999999999998888988877654

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG1912|consensus

Probab=98.64  E-value=1.3e-06  Score=68.53  Aligned_cols=151  Identities=13%  Similarity=0.091  Sum_probs=106.0

Q ss_pred             ceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCC------------CCEEEEecCCCeEEEEE
Q psy10662         36 AVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATD------------GDYVACGSENNSLYIYY  103 (221)
Q Consensus        36 ~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~l~~~~~d~~v~iwd  103 (221)
                      .-.++.|+|++.++-|+ ...|.+-|.++.+.++.+..|...|+.+.|.|.            .-.+|++...|.|.+||
T Consensus        17 N~~A~Dw~~~GLiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d   95 (1062)
T KOG1912|consen   17 NRNAADWSPSGLIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVD   95 (1062)
T ss_pred             cccccccCccceEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEE
Confidence            35678899998887766 456888899999999999999999999999863            12578888899999999


Q ss_pred             CCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec---CC-CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccc
Q psy10662        104 KGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT---DG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLER  179 (221)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~  179 (221)
                      ...+..+..             +..+..++..+.|-|   +. .+|++-..-..+.+|+..+++..-.+.+.        
T Consensus        96 ~~~~s~~~~-------------l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys--------  154 (1062)
T KOG1912|consen   96 FVLASVINW-------------LSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYS--------  154 (1062)
T ss_pred             ehhhhhhhh-------------hcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccC--------
Confidence            877655433             356667777788765   33 46777777789999999998765444321        


Q ss_pred             cccccccccceeEEEEcC-CCcEEEEecCCCeEEEEE
Q psy10662        180 DRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       180 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~  215 (221)
                             .....++.+.| |.+.+...+..|.+.+-+
T Consensus       155 -------~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~  184 (1062)
T KOG1912|consen  155 -------HEILSCFRVDPFDSRHFCVLGSKGFVLSCK  184 (1062)
T ss_pred             -------CcceeeeeeCCCCcceEEEEccCceEEEEe
Confidence                   22334456666 444444444455554443

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.61  E-value=3.9e-05  Score=58.25  Aligned_cols=150  Identities=11%  Similarity=-0.022  Sum_probs=91.0

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccC----------ceE-EEEEecCCcEEEecCCCcEEEEEcCCCccceee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----------AVS-YVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----------~i~-~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      +..+.+++.+|.|.-+|.. +++.+........          .+. .+.. .++.++.++.++.+..+|.++++.+-..
T Consensus        69 ~~~vy~~~~~g~l~ald~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~v~v~~~~g~l~ald~~tG~~~W~~  146 (394)
T PRK11138         69 YNKVYAADRAGLVKALDAD-TGKEIWSVDLSEKDGWFSKNKSALLSGGVTV-AGGKVYIGSEKGQVYALNAEDGEVAWQT  146 (394)
T ss_pred             CCEEEEECCCCeEEEEECC-CCcEeeEEcCCCcccccccccccccccccEE-ECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence            4566777788999999987 6776665542210          000 0111 2567888889999999999999887766


Q ss_pred             eccccceeE-EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         72 VGHINDKNF-VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        72 ~~~~~~v~~-~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      .... .+.+ ...  .+..++.+..++.+..+|..+++.+..+..+...    ....+...++    .  .+..++.++.
T Consensus       147 ~~~~-~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~----~~~~~~~sP~----v--~~~~v~~~~~  213 (394)
T PRK11138        147 KVAG-EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPS----LTLRGESAPA----T--AFGGAIVGGD  213 (394)
T ss_pred             cCCC-ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCc----ccccCCCCCE----E--ECCEEEEEcC
Confidence            4322 2221 112  2346667778899999999999988766322100    0000111111    1  1234666777


Q ss_pred             CCeEEEEEcCCCCceee
Q psy10662        151 NNSLYIYYKGLSKHMHA  167 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~  167 (221)
                      +|.+..+|..+++..-.
T Consensus       214 ~g~v~a~d~~~G~~~W~  230 (394)
T PRK11138        214 NGRVSAVLMEQGQLIWQ  230 (394)
T ss_pred             CCEEEEEEccCChhhhe
Confidence            88888888887765443

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.58  E-value=9.7e-06  Score=61.51  Aligned_cols=189  Identities=9%  Similarity=-0.032  Sum_probs=109.1

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce----
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK----   78 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v----   78 (221)
                      +..++.++.+|.+..+|.+ +++.+...+.. +.+.+--...++.++.+..++.+..+|.++++.+-.+.......    
T Consensus       120 ~~~v~v~~~~g~l~ald~~-tG~~~W~~~~~-~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~  197 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAE-DGEVAWQTKVA-GEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRG  197 (394)
T ss_pred             CCEEEEEcCCCEEEEEECC-CCCCcccccCC-CceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccC
Confidence            4466777889999999987 77777666533 22222111125677888889999999999998876654221100    


Q ss_pred             -eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec--CCCEEEEecCCCeEE
Q psy10662         79 -NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT--DGDYVACGSENNSLY  155 (221)
Q Consensus        79 -~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~  155 (221)
                       ..-..  .+..++.++.++.+..+|..+++.+...........  ..+    .....+.-+|  .+..+++++.+|.+.
T Consensus       198 ~~sP~v--~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~--~~~----~~~~~~~~sP~v~~~~vy~~~~~g~l~  269 (394)
T PRK11138        198 ESAPAT--AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGA--TEI----DRLVDVDTTPVVVGGVVYALAYNGNLV  269 (394)
T ss_pred             CCCCEE--ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCc--cch----hcccccCCCcEEECCEEEEEEcCCeEE
Confidence             01111  123566777889999999999887655422111100  000    0000011112  244666677889999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+|..+++.+-...+.                 ....+.  ..+..|+.++.+|.+..+|..+|+
T Consensus       270 ald~~tG~~~W~~~~~-----------------~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~  315 (394)
T PRK11138        270 ALDLRSGQIVWKREYG-----------------SVNDFA--VDGGRIYLVDQNDRVYALDTRGGV  315 (394)
T ss_pred             EEECCCCCEEEeecCC-----------------CccCcE--EECCEEEEEcCCCeEEEEECCCCc
Confidence            9999888754322210                 001111  134556666677778777777664

>KOG1920|consensus

Probab=98.58  E-value=1.8e-05  Score=65.14  Aligned_cols=189  Identities=11%  Similarity=0.155  Sum_probs=113.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcC----CC-----------
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNIN----KP-----------   65 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~----~~-----------   65 (221)
                      +.+.++.+..+|.|.+-|.. +. .+.....-...|.+++|+|+.. ++..+..+++.+-+-.    ..           
T Consensus        79 d~~~i~v~~~~G~iilvd~e-t~-~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~s  156 (1265)
T KOG1920|consen   79 DTNSICVITALGDIILVDPE-TL-ELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKS  156 (1265)
T ss_pred             ccceEEEEecCCcEEEEccc-cc-ceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhcccccccccccc
Confidence            35567788889999998876 32 2334444677899999998655 5556666666654320    00           


Q ss_pred             --------ccceeeec---------------------cccceeEEEEeCCCCEEEEe-----cCCCeEEEEECCCCeeeE
Q psy10662         66 --------NCLRSFVG---------------------HINDKNFVGLATDGDYVACG-----SENNSLYIYYKGLSKHMH  111 (221)
Q Consensus        66 --------~~~~~~~~---------------------~~~~v~~~~~~~~~~~l~~~-----~~d~~v~iwd~~~~~~~~  111 (221)
                              +.-..+.+                     ..+.=+++.|--||+++|+.     .....+++||-+ +..-.
T Consensus       157 k~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns  235 (1265)
T KOG1920|consen  157 KFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNS  235 (1265)
T ss_pred             ccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhc
Confidence                    00001111                     01112458899999998873     233789999865 22211


Q ss_pred             EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec---CCCeEEEEEcCCCCceeeeeeeccccccccccccccccc
Q psy10662        112 AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS---ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNE  188 (221)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (221)
                      .             -......-.+++|-|.|.++++-.   +|+.|.+|..+- -....+..           .......
T Consensus       236 ~-------------se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNG-L~hg~f~l-----------~~p~de~  290 (1265)
T KOG1920|consen  236 T-------------SEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNG-LRHGEFVL-----------PFPLDEK  290 (1265)
T ss_pred             c-------------cCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCC-cccccccc-----------CCccccc
Confidence            0             011223345789999999988754   456788886432 11111110           0111223


Q ss_pred             ceeEEEEcCCCcEEEE---ecCCCeEEEEECCc
Q psy10662        189 FVSAVCWRQLSRVLVA---ANSQGIIKIYVIPI  218 (221)
Q Consensus       189 ~v~~~~~~~~~~~l~~---~~~dg~i~iw~~~~  218 (221)
                      .|..++|+.++..|+.   ......|++|-+.+
T Consensus       291 ~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N  323 (1265)
T KOG1920|consen  291 EVEELAWNSNSDILAVVTSNLENSLVQLWTTGN  323 (1265)
T ss_pred             chheeeecCCCCceeeeecccccceEEEEEecC
Confidence            3899999999999988   44556699998764

>KOG1008|consensus

Probab=98.57  E-value=2.1e-08  Score=76.44  Aligned_cols=188  Identities=19%  Similarity=0.265  Sum_probs=118.8

Q ss_pred             ceEEEEeCCCeEEEEEecCCcee-eEEEEeccCceEEEEEec--CCcEEEec----CCCcEEEEEcCCC--ccc--eeee
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEA-LAVFKGHRKAVSYVKFLN--KEDIVSAS----TDSQLKLWNINKP--NCL--RSFV   72 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~i~~~~~~~--~~~l~s~~----~d~~v~~wd~~~~--~~~--~~~~   72 (221)
                      ..+++|..+|.|.+-.+..+... -....+|..+.++++|++  .+.|++|-    .|..+.+||+.++  .+.  ..+.
T Consensus        71 cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs  150 (783)
T KOG1008|consen   71 CILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFS  150 (783)
T ss_pred             hhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccc
Confidence            56889999999999988744332 234456788999999996  35566663    3667999999775  111  1222


Q ss_pred             c-cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecC
Q psy10662         73 G-HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSE  150 (221)
Q Consensus        73 ~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  150 (221)
                      . ......+++|..+.+++.+|.....++++|++.......              .-....+..+..+| .++++++-. 
T Consensus       151 ~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~--------------svnTk~vqG~tVdp~~~nY~cs~~-  215 (783)
T KOG1008|consen  151 SSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVS--------------SVNTKYVQGITVDPFSPNYFCSNS-  215 (783)
T ss_pred             cccccCccccccccCcchhhcccccchhhhhhhhhhhhhhh--------------hhhhhhcccceecCCCCCceeccc-
Confidence            2 233456888888888999999999999999873211000              01122455677778 677777655 


Q ss_pred             CCeEEEEEc-CCCC-ceeeeeeecccccccccccccccccceeEEEEcCCC-cEEEEec-CCCeEEEEECC
Q psy10662        151 NNSLYIYYK-GLSK-HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVAAN-SQGIIKIYVIP  217 (221)
Q Consensus       151 d~~i~~~d~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~dg~i~iw~~~  217 (221)
                      ||.|.+||. +.-+ ++..+.           .........+..++|+|.. .+|++.+ ..++|+++++.
T Consensus       216 dg~iAiwD~~rnienpl~~i~-----------~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  216 DGDIAIWDTYRNIENPLQIIL-----------RNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             cCceeeccchhhhccHHHHHh-----------hCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence            999999993 2111 111110           0001112357889999953 3444444 46788888875

>KOG3621|consensus

Probab=98.54  E-value=1.2e-06  Score=67.70  Aligned_cols=123  Identities=15%  Similarity=0.185  Sum_probs=90.4

Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      ...|.--++...+++++.|+.-|.+.+|+-..++....            ...+....+..+..+++..++|+|+..|.|
T Consensus        33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~------------~~~~~~~~~~~~~vs~~e~lvAagt~~g~V  100 (726)
T KOG3621|consen   33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKL------------KNEGATGITCVRSVSSVEYLVAAGTASGRV  100 (726)
T ss_pred             cceEEEEEeecCCceEEEecccceEEEEecCchhhhcc------------cccCccceEEEEEecchhHhhhhhcCCceE
Confidence            34455566677889999999999999998665554322            122344556667789999999999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .++.+..........+.+         ....|...|++++|++++..+++|...|+|.+-.+.+
T Consensus       101 ~v~ql~~~~p~~~~~~t~---------~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  101 SVFQLNKELPRDLDYVTP---------CDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             EeehhhccCCCcceeecc---------ccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            999887643322221111         1123788999999999999999999999999888765

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.51  E-value=8.9e-06  Score=65.49  Aligned_cols=135  Identities=17%  Similarity=0.210  Sum_probs=94.4

Q ss_pred             eCCCeEEEEEecCCceeeEEEEeccCc-eEEEEEec------CCcEEEecCCCcEEEEEcCCCc--ccee-e--eccccc
Q psy10662         10 SADHCVHYYDLRNTKEALAVFKGHRKA-VSYVKFLN------KEDIVSASTDSQLKLWNINKPN--CLRS-F--VGHIND   77 (221)
Q Consensus        10 ~~dg~i~i~~~~~~~~~~~~~~~~~~~-i~~~~~~~------~~~l~s~~~d~~v~~wd~~~~~--~~~~-~--~~~~~~   77 (221)
                      ...+.|+-.|++ .++.+..+..|... |..++-..      +...+.|-.+..+..||.+-..  .+.. .  ......
T Consensus       501 ~~~~~ly~mDLe-~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~  579 (794)
T PF08553_consen  501 NNPNKLYKMDLE-RGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNN  579 (794)
T ss_pred             CCCCceEEEecC-CCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCC
Confidence            345778888998 89999999987754 66655321      2347788888999999998643  2211 1  112335


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      ..|++-..+| +||.|+.+|.|++||- .++.-            ...+++...+|..++.+.||+++++.+. ..+.++
T Consensus       580 Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~A------------KT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi  644 (794)
T PF08553_consen  580 FSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRA------------KTALPGLGDPIIGIDVTADGKWILATCK-TYLLLI  644 (794)
T ss_pred             ceEEEecCCc-eEEEEeCCCcEEeecc-cchhh------------hhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEE
Confidence            6677776655 7999999999999983 23222            2235677889999999999999986664 567777


Q ss_pred             EcC
Q psy10662        158 YKG  160 (221)
Q Consensus       158 d~~  160 (221)
                      +..
T Consensus       645 ~t~  647 (794)
T PF08553_consen  645 DTL  647 (794)
T ss_pred             EEe
Confidence            753

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG3621|consensus

Probab=98.50  E-value=4.3e-06  Score=64.85  Aligned_cols=110  Identities=10%  Similarity=0.067  Sum_probs=82.4

Q ss_pred             cCCcEEEecCCCcEEEEEcCCCccceee-eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeeccccee
Q psy10662         44 NKEDIVSASTDSQLKLWNINKPNCLRSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML  122 (221)
Q Consensus        44 ~~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  122 (221)
                      .+.+++.|+.-|.+++|+-..++....- .+..+.+..+..+++..++|.|+..|.|.++-+....+....        .
T Consensus        44 t~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~--------~  115 (726)
T KOG3621|consen   44 TEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLD--------Y  115 (726)
T ss_pred             CCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcce--------e
Confidence            4778999999999999997665544322 223455667778888888999999999999987664332211        1


Q ss_pred             EeeE-EEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662        123 ESSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus       123 ~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      .... ..|...|++++|++++..+.+|...|+|..-.+.+
T Consensus       116 ~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  116 VTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             eccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            1111 23788999999999999999999999999887766

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.48  E-value=2.7e-05  Score=60.82  Aligned_cols=105  Identities=8%  Similarity=-0.023  Sum_probs=68.1

Q ss_pred             CCcEEEEEcCC-----CccceeeeccccceeEEEEeCCCCEEEEe-cCCCeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         54 DSQLKLWNINK-----PNCLRSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        54 d~~v~~wd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                      ++.|.+.|.++     .+.+..+. -......++++|||++++++ ..+.+|.|.|+.+.+....-+.+.+ ........
T Consensus       295 gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~-~~vvaeve  372 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPR-DAVVAEPE  372 (635)
T ss_pred             CCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCcc-ceEEEeec
Confidence            35688888877     33444443 34556899999999987555 4589999999987654221111111 11111111


Q ss_pred             EeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662        128 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus       128 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      - .......+|+++|+...+-.-|..|..||+..
T Consensus       373 v-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        373 L-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             c-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence            1 22344678999999888888999999999875

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.47  E-value=0.0002  Score=52.82  Aligned_cols=135  Identities=10%  Similarity=0.132  Sum_probs=80.6

Q ss_pred             CeEEEEEecCC---ceeeEEE--EeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCC
Q psy10662         13 HCVHYYDLRNT---KEALAVF--KGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG   87 (221)
Q Consensus        13 g~i~i~~~~~~---~~~~~~~--~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~   87 (221)
                      |.|.++++.+.   ...+..+  ...+++|++++--.+ .|++ +.++.|.+|++...+.+.....+..++........+
T Consensus        62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~~~-~lv~-~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~  139 (321)
T PF03178_consen   62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSFNG-RLVV-AVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFK  139 (321)
T ss_dssp             EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEETT-EEEE-EETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEET
T ss_pred             cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhhCC-EEEE-eecCEEEEEEccCcccchhhheecceEEEEEEeccc
Confidence            89999999842   1122222  235789999987744 4433 446899999998877222222233333333334446


Q ss_pred             CEEEEecCCCeEEEEECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         88 DYVACGSENNSLYIYYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        88 ~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      ++++.|.....+.++..+. .+.+..+           .-......++++.|-++++.++++..+|.+.++...
T Consensus       140 ~~I~vgD~~~sv~~~~~~~~~~~l~~v-----------a~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  140 NYILVGDAMKSVSLLRYDEENNKLILV-----------ARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             TEEEEEESSSSEEEEEEETTTE-EEEE-----------EEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             cEEEEEEcccCEEEEEEEccCCEEEEE-----------EecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            6888888777777774332 2212111           111224457888888777799999999999999875

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.46  E-value=0.00027  Score=53.36  Aligned_cols=167  Identities=15%  Similarity=0.154  Sum_probs=89.9

Q ss_pred             EEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee--ec------cccceeEEEEeC-----CC---CEEEEe
Q psy10662         30 FKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF--VG------HINDKNFVGLAT-----DG---DYVACG   93 (221)
Q Consensus        30 ~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~--~~------~~~~v~~~~~~~-----~~---~~l~~~   93 (221)
                      ++...++|++++.++=++++.|..+|.+.|.|++.+..+..-  ..      ....++++.|..     |+   -.+++|
T Consensus        82 ~~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   82 LDAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             E---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eeccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            344568999999998899999999999999999888776542  11      233577888862     22   367888


Q ss_pred             cCCCeEEEEECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEE-EecC-----------------C---CEEEEecCC
Q psy10662         94 SENNSLYIYYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVG-LATD-----------------G---DYVACGSEN  151 (221)
Q Consensus        94 ~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~-----------------~---~~l~~~~~d  151 (221)
                      ...|.+.+|.+.- ...-....+.       .....+.+++..+. ++.+                 +   .-+++...+
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~~~-------~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe  234 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQFA-------GATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSE  234 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEEEE-------EEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-S
T ss_pred             eCCCCEEEEEEecCCCCceEEEEe-------eccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcc
Confidence            8999999997641 1111111100       01112233333332 2111                 0   123334446


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE-----cCCCcEEEEecCCCeEEEEECCc
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW-----RQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ..++++...+.+......               ........+++     ...+..|++-..+|.|+++.++.
T Consensus       235 ~~irv~~~~~~k~~~K~~---------------~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~  291 (395)
T PF08596_consen  235 SDIRVFKPPKSKGAHKSF---------------DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPS  291 (395)
T ss_dssp             SEEEEE-TT---EEEEE----------------SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT
T ss_pred             cceEEEeCCCCcccceee---------------ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCC
Confidence            678998876655433221               11112233444     23567788888999999999985

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.46  E-value=0.00015  Score=56.65  Aligned_cols=210  Identities=13%  Similarity=0.098  Sum_probs=115.4

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccC------ceE--EEEEecCCcEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK------AVS--YVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~------~i~--~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~   74 (221)
                      +..+..++.++.|.-.|.. +++.+..+.....      .+.  .+....++.++.++.++.|.-+|.++++.+-.+...
T Consensus        61 ~g~vy~~~~~g~l~AlD~~-tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAA-TGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECC-CChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            3456677788999999987 6776665543222      010  111112277888889999999999999887665432


Q ss_pred             ccc-----e-eEEEEeCCCCEEEEec---------CCCeEEEEECCCCeeeEEEEeecccceeEeeE------EEee-Cc
Q psy10662         75 IND-----K-NFVGLATDGDYVACGS---------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSF------VGHI-ND  132 (221)
Q Consensus        75 ~~~-----v-~~~~~~~~~~~l~~~~---------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~  132 (221)
                      ...     + ....+.  +..++.++         .++.+..+|..+++.+..+.............      ..+. ..
T Consensus       140 ~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~  217 (488)
T cd00216         140 DQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT  217 (488)
T ss_pred             CCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence            210     1 111222  23444443         36789999999999887764432111100000      0000 11


Q ss_pred             e-EEEEEecCCCEEEEecCCC------------------eEEEEEcCCCCceeeeeeecccccccccccccccccce-eE
Q psy10662        133 K-NFVGLATDGDYVACGSENN------------------SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV-SA  192 (221)
Q Consensus       133 v-~~~~~~~~~~~l~~~~~d~------------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~  192 (221)
                      + ...++++.+..++.++.++                  .+.-+|+.+++..-.++......     ........++ ..
T Consensus       218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~-----~~~~~~s~p~~~~  292 (488)
T cd00216         218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDL-----WDYDGPNQPSLAD  292 (488)
T ss_pred             ccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCC-----cccccCCCCeEEe
Confidence            1 1245555566777776655                  68888888888765543211000     0000111111 11


Q ss_pred             EEEcCCCc---EEEEecCCCeEEEEECCcccC
Q psy10662        193 VCWRQLSR---VLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       193 ~~~~~~~~---~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      +. .-+|.   .++.++.+|.+...|..+|++
T Consensus       293 ~~-~~~g~~~~~V~~g~~~G~l~ald~~tG~~  323 (488)
T cd00216         293 IK-PKDGKPVPAIVHAPKNGFFYVLDRTTGKL  323 (488)
T ss_pred             cc-ccCCCeeEEEEEECCCceEEEEECCCCcE
Confidence            11 11333   677788899999999888763

The alignment model contains an 8-bladed beta-propeller.

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.39  E-value=0.00016  Score=56.78  Aligned_cols=85  Identities=7%  Similarity=0.024  Sum_probs=55.5

Q ss_pred             eCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        130 INDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      ......++++|||+++++++ .+..+.+.|+.+.+....-+.+.........    .-.......+|+++|....+..-|
T Consensus       320 GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaev----evGlGPLHTaFDg~G~aytslf~d  395 (635)
T PRK02888        320 PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEP----ELGLGPLHTAFDGRGNAYTTLFLD  395 (635)
T ss_pred             CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEee----ccCCCcceEEECCCCCEEEeEeec
Confidence            34566799999999877665 5889999999876543211111111111000    012233567899999988888889


Q ss_pred             CeEEEEECCc
Q psy10662        209 GIIKIYVIPI  218 (221)
Q Consensus       209 g~i~iw~~~~  218 (221)
                      .+|..|++..
T Consensus       396 sqv~kwn~~~  405 (635)
T PRK02888        396 SQIVKWNIEA  405 (635)
T ss_pred             ceeEEEehHH
Confidence            9999999875

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.39  E-value=0.00015  Score=55.51  Aligned_cols=163  Identities=10%  Similarity=0.049  Sum_probs=88.4

Q ss_pred             CeEEEEEecCC-----ce----eeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662         13 HCVHYYDLRNT-----KE----ALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL   83 (221)
Q Consensus        13 g~i~i~~~~~~-----~~----~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~   83 (221)
                      ..|+.+|+.+.     ++    ..+.+....-....+.++|.+.+++.+.||...++.....+..     ..+.-..+.|
T Consensus         2 ~~i~~~~~~~~~~~~dg~~~~l~~k~lg~~~~~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k-----~~G~g~~~vw   76 (443)
T PF04053_consen    2 NEIRTANLKNISEIKDGERLPLSVKELGSCEIYPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNK-----AFGSGLSFVW   76 (443)
T ss_dssp             TEEEEEE--S-----TTS-B----EEEEE-SS--SEEEE-TTSSEEEEEETTEEEEEETTTTEEE-----EEEE-SEEEE
T ss_pred             CceEEEECcCCCccCCCceeeEEeccCCCCCcCCeeEEECCCCCEEEEEcCCEEEEEEccCCccc-----ccCceeEEEE
Confidence            35666776633     21    2233444555689999999888888888999999984333221     2234567889


Q ss_pred             eCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC
Q psy10662         84 ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK  163 (221)
Q Consensus        84 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~  163 (221)
                      .+.+ .+|+-...+.|.|+.--..+....+             .. ...+..+-  + |.+|...+.+ .|.+||..+++
T Consensus        77 ~~~n-~yAv~~~~~~I~I~kn~~~~~~k~i-------------~~-~~~~~~If--~-G~LL~~~~~~-~i~~yDw~~~~  137 (443)
T PF04053_consen   77 SSRN-RYAVLESSSTIKIYKNFKNEVVKSI-------------KL-PFSVEKIF--G-GNLLGVKSSD-FICFYDWETGK  137 (443)
T ss_dssp             -TSS-EEEEE-TTS-EEEEETTEE-TT-------------------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--
T ss_pred             ecCc-cEEEEECCCeEEEEEcCccccceEE-------------cC-CcccceEE--c-CcEEEEECCC-CEEEEEhhHcc
Confidence            8854 4666666888999632211111111             00 11122221  2 7777777655 89999999998


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      .+..++.                 .+|..+.|+++|++++..+.+ .+.+++..
T Consensus       138 ~i~~i~v-----------------~~vk~V~Ws~~g~~val~t~~-~i~il~~~  173 (443)
T PF04053_consen  138 LIRRIDV-----------------SAVKYVIWSDDGELVALVTKD-SIYILKYN  173 (443)
T ss_dssp             EEEEESS------------------E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred             eeeEEec-----------------CCCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence            8877741                 238899999999999998866 56776543

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.39  E-value=0.00037  Score=51.49  Aligned_cols=175  Identities=15%  Similarity=0.160  Sum_probs=101.6

Q ss_pred             CeEEEEEecCCceeeEEEEecc-CceEEEEEe---c-----CCcEEEecC----------CCcEEEEEcCCC----ccce
Q psy10662         13 HCVHYYDLRNTKEALAVFKGHR-KAVSYVKFL---N-----KEDIVSAST----------DSQLKLWNINKP----NCLR   69 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~---~-----~~~l~s~~~----------d~~v~~wd~~~~----~~~~   69 (221)
                      +.|++.|.. +.+.+..+.-.. ..+.+++..   .     ..+++.|..          .|.|.++++...    ..+.
T Consensus         2 s~i~l~d~~-~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~   80 (321)
T PF03178_consen    2 SSIRLVDPT-TFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLK   80 (321)
T ss_dssp             -EEEEEETT-TSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEE
T ss_pred             cEEEEEeCC-CCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEE
Confidence            468888876 555555554322 345555543   2     233554432          288999999884    1222


Q ss_pred             ee--eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCe-eeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE
Q psy10662         70 SF--VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK-HMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA  146 (221)
Q Consensus        70 ~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  146 (221)
                      .+  ...+++|++++-- ++ +++++. .+.|.+|++...+ ....-            .......+.++..  .+++++
T Consensus        81 ~i~~~~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~------------~~~~~~~i~sl~~--~~~~I~  143 (321)
T PF03178_consen   81 LIHSTEVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKA------------FYDSPFYITSLSV--FKNYIL  143 (321)
T ss_dssp             EEEEEEESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEE------------EE-BSSSEEEEEE--ETTEEE
T ss_pred             EEEEEeecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhh------------eecceEEEEEEec--cccEEE
Confidence            22  2357788888776 33 444443 4679999987766 32221            1112224444444  466999


Q ss_pred             EecCCCeEEEEEcCCCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        147 CGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       147 ~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +|.....+.++..+.... +..+.-             ......++++.|-++++.++.+..+|.+.++..+.
T Consensus       144 vgD~~~sv~~~~~~~~~~~l~~va~-------------d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~  203 (321)
T PF03178_consen  144 VGDAMKSVSLLRYDEENNKLILVAR-------------DYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP  203 (321)
T ss_dssp             EEESSSSEEEEEEETTTE-EEEEEE-------------ESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred             EEEcccCEEEEEEEccCCEEEEEEe-------------cCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence            999888888885543221 222211             12345688899987767899999999999998863

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.38  E-value=2.9e-05  Score=59.22  Aligned_cols=132  Identities=14%  Similarity=0.116  Sum_probs=75.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      |+|+.++++ .+|.-.||... ..+. .    ..+.-...+|.+.+.+++-...+.|.++.--+.+....++. ...+..
T Consensus        42 pngr~v~V~-g~geY~iyt~~-~~r~-k----~~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k~i~~-~~~~~~  113 (443)
T PF04053_consen   42 PNGRFVLVC-GDGEYEIYTAL-AWRN-K----AFGSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVKSIKL-PFSVEK  113 (443)
T ss_dssp             TTSSEEEEE-ETTEEEEEETT-TTEE-E----EEEE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT------SS-EEE
T ss_pred             CCCCEEEEE-cCCEEEEEEcc-CCcc-c----ccCceeEEEEecCccEEEEECCCeEEEEEcCccccceEEcC-Ccccce
Confidence            788888884 67888888743 2222 1    12334567888877788888899999974333333334432 122333


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      +-.   |.+|+..+.+ .|.+||..+++.++.+             .  -..|..+.|++++.+++..+.+ .+.+++..
T Consensus       114 If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i-------------~--v~~vk~V~Ws~~g~~val~t~~-~i~il~~~  173 (443)
T PF04053_consen  114 IFG---GNLLGVKSSD-FICFYDWETGKLIRRI-------------D--VSAVKYVIWSDDGELVALVTKD-SIYILKYN  173 (443)
T ss_dssp             EE----SSSEEEEETT-EEEEE-TTT--EEEEE-------------S--S-E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred             EEc---CcEEEEECCC-CEEEEEhhHcceeeEE-------------e--cCCCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence            322   7777766555 7999999999888775             1  1237899999999999988866 56666543

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG2114|consensus

Probab=98.38  E-value=1e-05  Score=64.26  Aligned_cols=156  Identities=13%  Similarity=0.197  Sum_probs=98.6

Q ss_pred             cCCcEEEecCCCcEEEEEcCCCccceeeeccccc-eeEEEEeCCCCEEEEecCCC-----eEEEEECCCCeeeEEEEeec
Q psy10662         44 NKEDIVSASTDSQLKLWNINKPNCLRSFVGHIND-KNFVGLATDGDYVACGSENN-----SLYIYYKGLSKHMHAYRFDT  117 (221)
Q Consensus        44 ~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~~~~~~~~~  117 (221)
                      .++.++.|+.+|.|.+.+- .-+.+..++.+... |..+....+..+|++.++|+     .++|||++..+.-.      
T Consensus        34 ~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~------  106 (933)
T KOG2114|consen   34 STGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN------  106 (933)
T ss_pred             CCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC------
Confidence            3667999999999998873 44555667666666 55555555556788877664     48999986542110      


Q ss_pred             ccceeE--eeEEE-----eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662        118 VRSMLE--SSFVG-----HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV  190 (221)
Q Consensus       118 ~~~~~~--~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  190 (221)
                       .+.+.  .....     ...++.+++.+.+-+.+|+|-.+|.|..+.=+-..           ....+.........+|
T Consensus       107 -sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~R-----------Drgsr~~~~~~~~~pI  174 (933)
T KOG2114|consen  107 -SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILR-----------DRGSRQDYSHRGKEPI  174 (933)
T ss_pred             -CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchh-----------ccccceeeeccCCCCc
Confidence             01111  11111     24567889999999999999999999988421110           0000111122345689


Q ss_pred             eEEEEcCCCcE-EEEecCCCeEEEEECCcc
Q psy10662        191 SAVCWRQLSRV-LVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       191 ~~~~~~~~~~~-l~~~~~dg~i~iw~~~~~  219 (221)
                      +++++..++.. ++++ .-..|.+|.+..+
T Consensus       175 TgL~~~~d~~s~lFv~-Tt~~V~~y~l~gr  203 (933)
T KOG2114|consen  175 TGLALRSDGKSVLFVA-TTEQVMLYSLSGR  203 (933)
T ss_pred             eeeEEecCCceeEEEE-ecceeEEEEecCC
Confidence            99999988877 3333 3446888888743

>KOG1645|consensus

Probab=98.37  E-value=7.8e-06  Score=59.49  Aligned_cols=93  Identities=12%  Similarity=0.065  Sum_probs=72.5

Q ss_pred             EEEEEcCCCccceeeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662         57 LKLWNINKPNCLRSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF  135 (221)
Q Consensus        57 v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  135 (221)
                      +++.+..+-+....+..+...|..++|+|..+ ++..++.+..|+|.|+++...+..+             ..+ ..+.+
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy-------------~a~-~~~wS  240 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSY-------------IAY-NQIWS  240 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehe-------------ecc-CCcee
Confidence            45555444455555567778899999999877 7888999999999999988776554             333 78999


Q ss_pred             EEEecCC-CEEEEecCCCeEEEEEcCCCC
Q psy10662        136 VGLATDG-DYVACGSENNSLYIYYKGLSK  163 (221)
Q Consensus       136 ~~~~~~~-~~l~~~~~d~~i~~~d~~~~~  163 (221)
                      ++|.-+. ++|.+|...|.|.+||++..+
T Consensus       241 C~wDlde~h~IYaGl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  241 CCWDLDERHVIYAGLQNGMVLVYDMRQPE  269 (463)
T ss_pred             eeeccCCcceeEEeccCceEEEEEccCCC
Confidence            9998754 578888899999999998654

>KOG4640|consensus

Probab=98.36  E-value=3.2e-06  Score=64.80  Aligned_cols=80  Identities=11%  Similarity=0.089  Sum_probs=65.6

Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceE-EEEEecCCCEEEEecCCCe
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKN-FVGLATDGDYVACGSENNS  153 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~  153 (221)
                      ...+.-+.|+|...++|.+..+|.|.++.+. .+.+.++             +-+...++ +++|.|||++||+|-.||+
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwti-------------p~p~~~v~~sL~W~~DGkllaVg~kdG~   85 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTI-------------PIPGENVTASLCWRPDGKLLAVGFKDGT   85 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEec-------------cCCCCccceeeeecCCCCEEEEEecCCe
Confidence            3467889999999999999999999998776 4444443             33444555 9999999999999999999


Q ss_pred             EEEEEcCCCCceeee
Q psy10662        154 LYIYYKGLSKHMHAY  168 (221)
Q Consensus       154 i~~~d~~~~~~~~~~  168 (221)
                      |++-|..++..+..+
T Consensus        86 I~L~Dve~~~~l~~~  100 (665)
T KOG4640|consen   86 IRLHDVEKGGRLVSF  100 (665)
T ss_pred             EEEEEccCCCceecc
Confidence            999999998877664

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=98.35  E-value=0.00032  Score=49.27  Aligned_cols=192  Identities=11%  Similarity=0.091  Sum_probs=109.9

Q ss_pred             CCceEEEEeCCC--eEEEEEecCCceeeEEEEec-cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          2 NSCHLAFGSADH--CVHYYDLRNTKEALAVFKGH-RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      ++.++-+.+.-|  .|+.+|+. +++......-. .-.--.++...+......-.++...+||..+.+.+.++. ....=
T Consensus        55 ~g~LyESTG~yG~S~l~~~d~~-tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~~~-y~~EG  132 (264)
T PF05096_consen   55 DGTLYESTGLYGQSSLRKVDLE-TGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGTFP-YPGEG  132 (264)
T ss_dssp             TTEEEEEECSTTEEEEEEEETT-TSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE--SSS-
T ss_pred             CCEEEEeCCCCCcEEEEEEECC-CCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEEEe-cCCcc
Confidence            455666666666  78888988 56655444322 122334555555556666788999999999988888774 34555


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      +.++  .+++.|+.+.....+..+|..+.+..+.+.... .+.       .-..++.+.+- +|...|=.=....|...|
T Consensus       133 WGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~-~g~-------pv~~LNELE~i-~G~IyANVW~td~I~~Id  201 (264)
T PF05096_consen  133 WGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTD-NGR-------PVSNLNELEYI-NGKIYANVWQTDRIVRID  201 (264)
T ss_dssp             -EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EE-TTE-------E---EEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred             eEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEE-CCE-------ECCCcEeEEEE-cCEEEEEeCCCCeEEEEe
Confidence            6666  456777777777789999998887777653221 111       12234445554 555555444566777788


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      ..+++....+++..................-.+.++++|..+.|...+
T Consensus       202 p~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  202 PETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             TTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             CCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            888888887776543322211111112245679999998665544443

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.30  E-value=0.00094  Score=52.29  Aligned_cols=160  Identities=15%  Similarity=0.146  Sum_probs=88.9

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCc--eEEEEEec---CCcEEEec---------CCCcEEEEEcCCCccce
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKA--VSYVKFLN---KEDIVSAS---------TDSQLKLWNINKPNCLR   69 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~--i~~~~~~~---~~~l~s~~---------~d~~v~~wd~~~~~~~~   69 (221)
                      ..++.++.+|.|+-+|.+ +++.+..+......  -..+.-+|   ++.++.++         .++.+..+|..+++.+-
T Consensus       111 ~~V~v~~~~g~v~AlD~~-TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W  189 (488)
T cd00216         111 RKVFFGTFDGRLVALDAE-TGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLW  189 (488)
T ss_pred             CeEEEecCCCeEEEEECC-CCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceee
Confidence            577778889999999998 77777766533221  00111112   35555553         36789999999998776


Q ss_pred             eeecccc--------------------ce-eEEEEeCCCCEEEEecCCC------------------eEEEEECCCCeee
Q psy10662         70 SFVGHIN--------------------DK-NFVGLATDGDYVACGSENN------------------SLYIYYKGLSKHM  110 (221)
Q Consensus        70 ~~~~~~~--------------------~v-~~~~~~~~~~~l~~~~~d~------------------~v~iwd~~~~~~~  110 (221)
                      .+.....                    .+ ...++.+.+..++.++.++                  .|.-+|..+++.+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~  269 (488)
T cd00216         190 RFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVK  269 (488)
T ss_pred             EeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEE
Confidence            6532111                    01 1234455566777776554                  7889999999988


Q ss_pred             EEEEeecccceeEeeEEEeeCc-eEEEEEecCCC---EEEEecCCCeEEEEEcCCCCceeee
Q psy10662        111 HAYRFDTVRSMLESSFVGHIND-KNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHAY  168 (221)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~  168 (221)
                      ..++.......   .+.....+ +..+. .-++.   .+++++.+|.+...|.++++.+-..
T Consensus       270 W~~~~~~~~~~---~~~~~s~p~~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~  327 (488)
T cd00216         270 WFYQTTPHDLW---DYDGPNQPSLADIK-PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISAR  327 (488)
T ss_pred             EEeeCCCCCCc---ccccCCCCeEEecc-ccCCCeeEEEEEECCCceEEEEECCCCcEeeEe
Confidence            77632111000   00000000 00000 01222   4666677777777777777655443

The alignment model contains an 8-bladed beta-propeller.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.27  E-value=8.1e-05  Score=44.80  Aligned_cols=90  Identities=16%  Similarity=0.169  Sum_probs=64.2

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL   83 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~   83 (221)
                      +.|++|+.|..|++|+-   ...+..+. ..+.|++++-...+.++.+-.+|+|-+|+-.  +.+-..+. +..+.++.+
T Consensus        16 ~eLlvGs~D~~IRvf~~---~e~~~Ei~-e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~--~RlWRiKS-K~~~~~~~~   88 (111)
T PF14783_consen   16 NELLVGSDDFEIRVFKG---DEIVAEIT-ETDKVTSLCSLGGGRFAYALANGTVGVYDRS--QRLWRIKS-KNQVTSMAF   88 (111)
T ss_pred             ceEEEecCCcEEEEEeC---CcEEEEEe-cccceEEEEEcCCCEEEEEecCCEEEEEeCc--ceeeeecc-CCCeEEEEE
Confidence            67899999999999974   45667776 4567889988877889999999999999853  22223332 333555554


Q ss_pred             e-CCC--C-EEEEecCCCeEE
Q psy10662         84 A-TDG--D-YVACGSENNSLY  100 (221)
Q Consensus        84 ~-~~~--~-~l~~~~~d~~v~  100 (221)
                      . .++  . -|++|-.+|.|-
T Consensus        89 ~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   89 YDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             EcCCCCCceEEEEEecCCeEE
Confidence            3 332  2 588888888764

>KOG4649|consensus

Probab=98.27  E-value=0.00049  Score=47.86  Aligned_cols=109  Identities=14%  Similarity=0.093  Sum_probs=76.4

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL   83 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~   83 (221)
                      .+++.|+..+.+.--|.. +++....-. -...|.+-+.--+++++.|+..|.+++.+.+++..+..+.....-=.....
T Consensus        24 T~v~igSHs~~~~avd~~-sG~~~We~i-lg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~  101 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQ-SGNLIWEAI-LGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQC  101 (354)
T ss_pred             eEEEEecCCceEEEecCC-CCcEEeehh-hCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEE
Confidence            456677788888877876 555443321 223344433334677999999999999999999877766533322223345


Q ss_pred             eCCCCEEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662         84 ATDGDYVACGSENNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        84 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  114 (221)
                      .+++.++..++.|+.....|.++..++...+
T Consensus       102 d~~~glIycgshd~~~yalD~~~~~cVyksk  132 (354)
T KOG4649|consen  102 DFDGGLIYCGSHDGNFYALDPKTYGCVYKSK  132 (354)
T ss_pred             cCCCceEEEecCCCcEEEecccccceEEecc
Confidence            6788899999999999999998887777654

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.25  E-value=0.00022  Score=42.99  Aligned_cols=99  Identities=10%  Similarity=0.159  Sum_probs=65.6

Q ss_pred             eEEEEEec---C--CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeE
Q psy10662         37 VSYVKFLN---K--EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH  111 (221)
Q Consensus        37 i~~~~~~~---~--~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~  111 (221)
                      |++|++.+   +  ..|++|+.|..|++|+-  .+.+.++.. .+.|.++.-... ..|+.+-.+|+|-+|+-.....  
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlW--   75 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLW--   75 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCcceee--
Confidence            67788763   2  45999999999999974  466666653 455777776655 5789999999999997532211  


Q ss_pred             EEEeecccceeEeeEEEeeCceEEEEEe-cC--C-CEEEEecCCCeEE
Q psy10662        112 AYRFDTVRSMLESSFVGHINDKNFVGLA-TD--G-DYVACGSENNSLY  155 (221)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~--~-~~l~~~~~d~~i~  155 (221)
                      .              ......+.++.+. .+  | .-|++|=.+|.|-
T Consensus        76 R--------------iKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   76 R--------------IKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             e--------------eccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            1              1123345555543 23  3 2578888888764

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.22  E-value=0.0007  Score=47.67  Aligned_cols=197  Identities=8%  Similarity=0.039  Sum_probs=103.1

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEec-cCceEEEEEecCCcEEEec-CCCcEEEEEcCCCcc------ceeee--
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH-RKAVSYVKFLNKEDIVSAS-TDSQLKLWNINKPNC------LRSFV--   72 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~l~s~~-~d~~v~~wd~~~~~~------~~~~~--   72 (221)
                      +.++++....+.|..++.  .++.++.+.-. .+..-.|++..++.++... .++.+.++++.....      ...+.  
T Consensus        34 ~tLfaV~d~~~~i~els~--~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~  111 (248)
T PF06977_consen   34 GTLFAVQDEPGEIYELSL--DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLG  111 (248)
T ss_dssp             TEEEEEETTTTEEEEEET--T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE--
T ss_pred             CeEEEEECCCCEEEEEcC--CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecc
Confidence            457777777888877775  46777776543 3568889998666666555 488999998843211      11111  


Q ss_pred             ---ccccceeEEEEeCCCCEEEEecCCCeEEEEECCC---CeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEE
Q psy10662         73 ---GHINDKNFVGLATDGDYVACGSENNSLYIYYKGL---SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYV  145 (221)
Q Consensus        73 ---~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l  145 (221)
                         .++..+-.++|.|.++.|+.+-+..-..+|.+..   ...+........     .........+.++.++|. +.++
T Consensus       112 ~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~S~l~~~p~t~~ll  186 (248)
T PF06977_consen  112 FPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDL-----DDDKLFVRDLSGLSYDPRTGHLL  186 (248)
T ss_dssp             -S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHH-----H-HT--SS---EEEEETTTTEEE
T ss_pred             cccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecccccc-----ccccceeccccceEEcCCCCeEE
Confidence               2345688999999888777776666666665543   111111100000     001122334678889984 5677


Q ss_pred             EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEE
Q psy10662        146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIY  214 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  214 (221)
                      +.+.....|..+| ..++.+..+.......-      +...-...-.++|.++|++.++. .-+..+++
T Consensus       187 iLS~es~~l~~~d-~~G~~~~~~~L~~g~~g------l~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~f  247 (248)
T PF06977_consen  187 ILSDESRLLLELD-RQGRVVSSLSLDRGFHG------LSKDIPQPEGIAFDPDGNLYIVS-EPNLFYRF  247 (248)
T ss_dssp             EEETTTTEEEEE--TT--EEEEEE-STTGGG-------SS---SEEEEEE-TT--EEEEE-TTTEEEEE
T ss_pred             EEECCCCeEEEEC-CCCCEEEEEEeCCcccC------cccccCCccEEEECCCCCEEEEc-CCceEEEe
Confidence            7788888899998 66766666654331110      01111235679999999765554 56655554

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>smart00320 WD40 WD40 repeats

Probab=98.19  E-value=6.1e-06  Score=39.49  Aligned_cols=38  Identities=24%  Similarity=0.535  Sum_probs=32.7

Q ss_pred             ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEE
Q psy10662         66 NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  103 (221)
Q Consensus        66 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd  103 (221)
                      ++...+..|...|.++.|++++..+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34556667888999999999999999999999999995

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG3617|consensus

Probab=98.18  E-value=4.4e-06  Score=66.47  Aligned_cols=110  Identities=10%  Similarity=0.098  Sum_probs=82.8

Q ss_pred             eeEEEEeCCCCEEEEec----CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         78 KNFVGLATDGDYVACGS----ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      -+-..|+|...+++.++    ..|.|.|| ..+|++.+..              ..+-.+++++|+|..-.|+.|=..|.
T Consensus        18 sti~SWHPsePlfAVA~fS~er~GSVtIf-adtGEPqr~V--------------t~P~hatSLCWHpe~~vLa~gwe~g~   82 (1416)
T KOG3617|consen   18 STISSWHPSEPLFAVASFSPERGGSVTIF-ADTGEPQRDV--------------TYPVHATSLCWHPEEFVLAQGWEMGV   82 (1416)
T ss_pred             ccccccCCCCceeEEEEecCCCCceEEEE-ecCCCCCccc--------------ccceehhhhccChHHHHHhhccccce
Confidence            35567999998887765    35788887 3455443221              11223567999999888999999999


Q ss_pred             EEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        154 LYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +.+|...+.+.....               ..|..+|..+.|||+|..|+++..-|.+.+|...
T Consensus        83 ~~v~~~~~~e~htv~---------------~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   83 SDVQKTNTTETHTVV---------------ETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eEEEecCCceeeeec---------------cCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            999987655432111               2588899999999999999999999999999876

>KOG4640|consensus

Probab=98.17  E-value=1.4e-05  Score=61.37  Aligned_cols=77  Identities=12%  Similarity=0.132  Sum_probs=65.3

Q ss_pred             CceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee-EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEE
Q psy10662         35 KAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN-FVGLATDGDYVACGSENNSLYIYYKGLSKHMHA  112 (221)
Q Consensus        35 ~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~  112 (221)
                      ..+.-+.|+|. ..+|.+..+|.+.+..+. .+.+.++.-+...++ +++|.|||+.+|.|-.||+|++.|+.++..+..
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~   99 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS   99 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence            45778899984 568899999999999887 667777765666666 999999999999999999999999999887765

>smart00320 WD40 WD40 repeats

Probab=98.15  E-value=1.3e-05  Score=38.32  Aligned_cols=35  Identities=23%  Similarity=0.524  Sum_probs=30.9

Q ss_pred             eeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662        124 SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus       124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ..+..|...+.++.|.|++.++++++.|+.+++|+
T Consensus         6 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        6 KTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34567888999999999999999999999999995

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.14  E-value=0.00015  Score=58.71  Aligned_cols=138  Identities=16%  Similarity=0.222  Sum_probs=90.1

Q ss_pred             cCCCcEEEEEcCCCccceeeeccccceeEEEEeCCC-------CEEEEecCCCeEEEEECCCCe-eeEEEEeecccceeE
Q psy10662         52 STDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG-------DYVACGSENNSLYIYYKGLSK-HMHAYRFDTVRSMLE  123 (221)
Q Consensus        52 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~-------~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~  123 (221)
                      .....|+-.|++.|+.+.....+... .-..+.|+.       .-.+.|-.++.+..||.+... .+..   ..     .
T Consensus       501 ~~~~~ly~mDLe~GKVV~eW~~~~~~-~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~---~~-----~  571 (794)
T PF08553_consen  501 NNPNKLYKMDLERGKVVEEWKVHDDI-PVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVD---SQ-----S  571 (794)
T ss_pred             CCCCceEEEecCCCcEEEEeecCCCc-ceeEecccccccccCCCceEEEECCCceEEeccCCCCCceee---cc-----c
Confidence            45678999999999999988776643 233444432       235566677789999998543 1110   00     0


Q ss_pred             eeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE
Q psy10662        124 SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV  203 (221)
Q Consensus       124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  203 (221)
                      +. ........|++-+.+| +||+|+.+|.|++||. .+..              ....+.+-..+|..++.+.||+||+
T Consensus       572 k~-Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~--------------AKT~lp~lG~pI~~iDvt~DGkwil  634 (794)
T PF08553_consen  572 KQ-YSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKR--------------AKTALPGLGDPIIGIDVTADGKWIL  634 (794)
T ss_pred             cc-cccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchh--------------hhhcCCCCCCCeeEEEecCCCcEEE
Confidence            01 1234456677777676 7899999999999983 2211              1112234567899999999999998


Q ss_pred             EecCCCeEEEEEC
Q psy10662        204 AANSQGIIKIYVI  216 (221)
Q Consensus       204 ~~~~dg~i~iw~~  216 (221)
                      +.+. ..+.+++.
T Consensus       635 aTc~-tyLlLi~t  646 (794)
T PF08553_consen  635 ATCK-TYLLLIDT  646 (794)
T ss_pred             Eeec-ceEEEEEE
Confidence            8764 45666665

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.14  E-value=0.0012  Score=47.51  Aligned_cols=148  Identities=14%  Similarity=0.262  Sum_probs=81.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee----------
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF----------   71 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~----------   71 (221)
                      .++.|+.|..+| |.+++............  ...|..+...++-.++..=.|+.+.++++.........          
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~~~~~   82 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFPKSRS   82 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEcCCccEEEEchhhcccccccccccccccc
Confidence            478899999998 89999842333333333  33499999987544444445699999998764433310          


Q ss_pred             ----eccccceeEEE--EeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE
Q psy10662         72 ----VGHINDKNFVG--LATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV  145 (221)
Q Consensus        72 ----~~~~~~v~~~~--~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  145 (221)
                          ......+..++  -.+.+...+.......|.+|..........        ...+. ..-...+..++|.  ++.+
T Consensus        83 ~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~--------~~~ke-~~lp~~~~~i~~~--~~~i  151 (275)
T PF00780_consen   83 LPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFS--------KLLKE-ISLPDPPSSIAFL--GNKI  151 (275)
T ss_pred             ccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCccccc--------ceeEE-EEcCCCcEEEEEe--CCEE
Confidence                01122344444  112333333333444788876644211000        11111 1234667788887  4466


Q ss_pred             EEecCCCeEEEEEcCCCCc
Q psy10662        146 ACGSENNSLYIYYKGLSKH  164 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~~~~~  164 (221)
                      +.|..++ ..+.|+.++..
T Consensus       152 ~v~~~~~-f~~idl~~~~~  169 (275)
T PF00780_consen  152 CVGTSKG-FYLIDLNTGSP  169 (275)
T ss_pred             EEEeCCc-eEEEecCCCCc
Confidence            6666444 66677775544

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.05  E-value=0.00046  Score=52.62  Aligned_cols=133  Identities=14%  Similarity=0.131  Sum_probs=74.6

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCc--EEEecCCCc--EEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED--IVSASTDSQ--LKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--l~s~~~d~~--v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .+.+++++ .++...... ..+.-..-+|+|++.  +++...||.  |.++|+...... .+....+.-..=.|+|+|++
T Consensus       219 ~i~~~~l~-~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~-~Lt~~~gi~~~Ps~spdG~~  295 (425)
T COG0823         219 RIYYLDLN-TGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-RLTNGFGINTSPSWSPDGSK  295 (425)
T ss_pred             eEEEEecc-CCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcce-ecccCCccccCccCCCCCCE
Confidence            57788887 443333333 333445567888554  556666776  556677666533 34333333346678999997


Q ss_pred             EEE-ecCCCe--EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-CCe--EEEEEcCCCC
Q psy10662         90 VAC-GSENNS--LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-NNS--LYIYYKGLSK  163 (221)
Q Consensus        90 l~~-~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~~~d~~~~~  163 (221)
                      ++- .+..|.  |.+++.+..... .+             ......-..-.|+|+|++|+..+. +|.  |.+.|+.++.
T Consensus       296 ivf~Sdr~G~p~I~~~~~~g~~~~-ri-------------T~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~  361 (425)
T COG0823         296 IVFTSDRGGRPQIYLYDLEGSQVT-RL-------------TFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG  361 (425)
T ss_pred             EEEEeCCCCCcceEEECCCCCcee-Ee-------------eccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence            654 445554  555555544331 11             111111125678999999887664 344  5566665544

>KOG1920|consensus

Probab=98.04  E-value=0.00075  Score=56.18  Aligned_cols=165  Identities=14%  Similarity=0.182  Sum_probs=99.4

Q ss_pred             CceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEE
Q psy10662         35 KAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        35 ~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  113 (221)
                      +.|.++.|.- ...++.+..+|.|.+-|.++..... ...-...|.+++|+||++.++..+..+++.+-. ....++...
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~ei-vg~vd~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~i~E~  146 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEI-VGNVDNGISAASWSPDEELLALITGRQTLLFMT-KDFEPIAEK  146 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccccceee-eeeccCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccchhcc
Confidence            5799999984 5668888889999998887654332 222456799999999999988887777665432 222121111


Q ss_pred             Eee-----------cccceeEeeEEE---------------------eeCceEEEEEecCCCEEEEe-----cCCCeEEE
Q psy10662        114 RFD-----------TVRSMLESSFVG---------------------HINDKNFVGLATDGDYVACG-----SENNSLYI  156 (221)
Q Consensus       114 ~~~-----------~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~l~~~-----~~d~~i~~  156 (221)
                      ..+           ..-++....+.+                     ..+.-+.+.|--||+++|+.     ...+.|++
T Consensus       147 ~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV  226 (1265)
T KOG1920|consen  147 PLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRV  226 (1265)
T ss_pred             ccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEE
Confidence            110           000011111111                     11223468899999999983     33378999


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec---CCCeEEEEECC
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN---SQGIIKIYVIP  217 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iw~~~  217 (221)
                      ||.+ +.. ...     ..         .....=.+++|-|.|.++++-.   .|+.|.+++-.
T Consensus       227 ~drE-g~L-ns~-----se---------~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN  274 (1265)
T KOG1920|consen  227 YDRE-GAL-NST-----SE---------PVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN  274 (1265)
T ss_pred             eccc-chh-hcc-----cC---------cccccccceeecCCCCeEeeeeecCCCCcEEEEecC
Confidence            9975 221 110     00         1111224689999999998854   46678887643

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.03  E-value=0.0014  Score=46.25  Aligned_cols=178  Identities=9%  Similarity=0.062  Sum_probs=91.9

Q ss_pred             EEEeccCceEEEEEecC-CcEE-EecCCCcEEEEEcCCCccceeeecc-ccceeEEEEeCCCCEEEEecCCCeEEEEECC
Q psy10662         29 VFKGHRKAVSYVKFLNK-EDIV-SASTDSQLKLWNINKPNCLRSFVGH-INDKNFVGLATDGDYVACGSENNSLYIYYKG  105 (221)
Q Consensus        29 ~~~~~~~~i~~~~~~~~-~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~  105 (221)
                      .+.+-...+..|+|+|+ +.|+ +....+.|..++. +++.++.+.-. .+..-.+++..++.++++.-.++.+.++++.
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~   94 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID   94 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence            34444556999999974 5444 5566788888886 57777766422 3457788888777777777678999988874


Q ss_pred             CCee-eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC---CCceeeeeeecccccccccc
Q psy10662        106 LSKH-MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL---SKHMHAYRFDTVRSMLERDR  181 (221)
Q Consensus       106 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~  181 (221)
                      .... +..-.   ...........++..+-.++|+|.++.|+++-+..-..+|.+..   ...........       ..
T Consensus        95 ~~~~~~~~~~---~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~-------~~  164 (248)
T PF06977_consen   95 DDTTSLDRAD---VQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQD-------LD  164 (248)
T ss_dssp             ---TT--EEE---EEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HH-------HH
T ss_pred             ccccccchhh---ceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccc-------cc
Confidence            3211 10000   00000000113445678899999888777777777777776654   11111111000       00


Q ss_pred             cccccccceeEEEEcCC-CcEEEEecCCCeEEEEECC
Q psy10662        182 NEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       182 ~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~  217 (221)
                      ........+.+++++|. +.+++.......|..+|..
T Consensus       165 ~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~  201 (248)
T PF06977_consen  165 DDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQ  201 (248)
T ss_dssp             -HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT
T ss_pred             cccceeccccceEEcCCCCeEEEEECCCCeEEEECCC
Confidence            01112234678899985 4566666667777777743

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG1008|consensus

Probab=98.00  E-value=1.5e-06  Score=66.71  Aligned_cols=154  Identities=16%  Similarity=0.163  Sum_probs=104.6

Q ss_pred             CceEEEEEe-c-C-CcEEEecCCCcEEEEEcCCCccc--eeeeccccceeEEEEeCC-CCEEEEec----CCCeEEEEEC
Q psy10662         35 KAVSYVKFL-N-K-EDIVSASTDSQLKLWNINKPNCL--RSFVGHINDKNFVGLATD-GDYVACGS----ENNSLYIYYK  104 (221)
Q Consensus        35 ~~i~~~~~~-~-~-~~l~s~~~d~~v~~wd~~~~~~~--~~~~~~~~~v~~~~~~~~-~~~l~~~~----~d~~v~iwd~  104 (221)
                      ..+.|+++. . + ..++.|..+|.|.+-.++...--  ....++..++++++|++- .+.||+|-    .|..+.|||+
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi  136 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI  136 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence            356777765 2 3 34778899999999988765332  233567889999999885 34566653    2567999999


Q ss_pred             CCC--eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCc-eeeeeeecccccccccc
Q psy10662        105 GLS--KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLERDR  181 (221)
Q Consensus       105 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~  181 (221)
                      .+.  .+.....+..          +......+++|..+.+++.+|...+.+.++|++.... ...              
T Consensus       137 ~s~ltvPke~~~fs~----------~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~s--------------  192 (783)
T KOG1008|consen  137 NSLLTVPKESPLFSS----------STLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSS--------------  192 (783)
T ss_pred             ccccCCCcccccccc----------ccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhh--------------
Confidence            876  2222211110          1233445788888889999999999999999873321 111              


Q ss_pred             cccccccceeEEEEcC-CCcEEEEecCCCeEEEEEC
Q psy10662        182 NEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       182 ~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~  216 (221)
                         -.+..+..+..+| .+.|+++-. ||.|.+||.
T Consensus       193 ---vnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~  224 (783)
T KOG1008|consen  193 ---VNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDT  224 (783)
T ss_pred             ---hhhhhcccceecCCCCCceeccc-cCceeeccc
Confidence               1233567788888 788888876 999999993

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.91  E-value=0.0051  Score=46.62  Aligned_cols=190  Identities=12%  Similarity=0.049  Sum_probs=119.8

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEe-c--CCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSA-S--TDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~-~--~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      ..+....++.|.+.|.. ..........- .....+++.+++ .+..+ .  .++++.+.|-.+.+.......-..+ ..
T Consensus        88 vyv~~~~~~~v~vid~~-~~~~~~~~~vG-~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~  164 (381)
T COG3391          88 VYVTTGDSNTVSVIDTA-TNTVLGSIPVG-LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TG  164 (381)
T ss_pred             EEEecCCCCeEEEEcCc-ccceeeEeeec-cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ce
Confidence            45555556889999976 44444444322 256788888744 44444 3  3788999998888887775433344 88


Q ss_pred             EEEeCCCCEEEEe-cCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC---CeEEE
Q psy10662         81 VGLATDGDYVACG-SENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN---NSLYI  156 (221)
Q Consensus        81 ~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~  156 (221)
                      +++.|+|+.+... ..++.|.+.|........ -.        .............+.++|+|+.+.+....   +.+..
T Consensus       165 ~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~--------~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~  235 (381)
T COG3391         165 VAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GS--------VGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLK  235 (381)
T ss_pred             EEECCCCCeEEEEecCCCeEEEEeCCCcceec-cc--------cccccccCCCCceEEECCCCCEEEEEeccCCCceEEE
Confidence            9999999965444 578899999976554432 00        00001222344568899999976655544   58888


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEECCccc
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVIPIRV  220 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~  220 (221)
                      .|..++.....-.            . .+.. ....+..+|+|+.+.+... .+.+.+.|..+.+
T Consensus       236 id~~~~~v~~~~~------------~-~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~  286 (381)
T COG3391         236 IDTATGNVTATDL------------P-VGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDR  286 (381)
T ss_pred             EeCCCceEEEecc------------c-cccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCc
Confidence            8887765543210            0 0111 3456788999998888744 4778877776543

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.89  E-value=0.0014  Score=50.01  Aligned_cols=162  Identities=12%  Similarity=0.117  Sum_probs=90.1

Q ss_pred             eeEEEEeccCceEEEEEecCCc-EE--EecC-C-CcEEEEEcCCCccceeeeccccceeEEEEeCCCCEE-EEecCCCeE
Q psy10662         26 ALAVFKGHRKAVSYVKFLNKED-IV--SAST-D-SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYV-ACGSENNSL   99 (221)
Q Consensus        26 ~~~~~~~~~~~i~~~~~~~~~~-l~--s~~~-d-~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v   99 (221)
                      ..+.+......+..-+|+|++. ++  +-.. . ..+.++|+.+++...... ..+.-..-+|+|+|+.+ ++...||..
T Consensus       184 ~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~  262 (425)
T COG0823         184 NQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSP  262 (425)
T ss_pred             ceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCc
Confidence            3344444445666777887443 22  2122 2 469999998887655443 33344567899999876 455667754


Q ss_pred             --EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCe--EEEEEcCCCCceeeeeeeccc
Q psy10662        100 --YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNS--LYIYYKGLSKHMHAYRFDTVR  174 (221)
Q Consensus       100 --~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~--i~~~d~~~~~~~~~~~~~~~~  174 (221)
                        .+.|+..++..+              +....+.-..=.|+|+|+.|+-.+ ..|.  |.+++.+.... ..+.+.   
T Consensus       263 ~iy~~dl~~~~~~~--------------Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~---  324 (425)
T COG0823         263 DIYLMDLDGKNLPR--------------LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFS---  324 (425)
T ss_pred             cEEEEcCCCCccee--------------cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeecc---
Confidence              455666554221              122222222556899999876554 4554  44455444332 222111   


Q ss_pred             ccccccccccccccceeEEEEcCCCcEEEEecC-CCe--EEEEECCc
Q psy10662        175 SMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGI--IKIYVIPI  218 (221)
Q Consensus       175 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~--i~iw~~~~  218 (221)
                                ...  -....|+|||++|+..+. +|.  |.+.++.+
T Consensus       325 ----------~~~--~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~  359 (425)
T COG0823         325 ----------GGG--NSNPVWSPDGDKIVFESSSGGQWDIDKNDLAS  359 (425)
T ss_pred             ----------CCC--CcCccCCCCCCEEEEEeccCCceeeEEeccCC
Confidence                      111  115678999999887764 344  55555543

>KOG2444|consensus

Probab=97.88  E-value=5.3e-05  Score=51.33  Aligned_cols=140  Identities=11%  Similarity=0.061  Sum_probs=81.1

Q ss_pred             EEEecCCCcEEEEEcCCCccceee-eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeE
Q psy10662         48 IVSASTDSQLKLWNINKPNCLRSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSF  126 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~  126 (221)
                      +...+.||.|+-++++.-+....- .-+...   .....-+..+++|+.+|.|.+|..........            ..
T Consensus        33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d------------~~   97 (238)
T KOG2444|consen   33 LRATSADGLVRERKVRKHKESCRSERFIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSD------------RV   97 (238)
T ss_pred             hccccCCcccccchhhhhhhhhhhhhhhhcc---eeecccCceEEeecccceEEEecCCccchHHH------------hh
Confidence            556788999998888654432211 112111   11122345799999999999997652111000            00


Q ss_pred             EEeeCce-EEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccc-cceeEEEEcCCCcEEEE
Q psy10662        127 VGHINDK-NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN-EFVSAVCWRQLSRVLVA  204 (221)
Q Consensus       127 ~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~  204 (221)
                      ......+ ..+.-..++.+..+++.+|.|+.|+....+.+....               .|+ .++..+..+..++.++.
T Consensus        98 ~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g---------------~h~~~~~e~~ivv~sd~~i~~  162 (238)
T KOG2444|consen   98 CSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVG---------------QHNFESGEELIVVGSDEFLKI  162 (238)
T ss_pred             hcccccceeccccccccceeEEeccCCceeeeccccCceeeeec---------------cccCCCcceeEEecCCceEEe
Confidence            1111112 222223456688999999999999987665543332               233 34445555556677777


Q ss_pred             e--cCCCeEEEEECC
Q psy10662        205 A--NSQGIIKIYVIP  217 (221)
Q Consensus       205 ~--~~dg~i~iw~~~  217 (221)
                      +  |.|..++.|++.
T Consensus       163 a~~S~d~~~k~W~ve  177 (238)
T KOG2444|consen  163 ADTSHDRVLKKWNVE  177 (238)
T ss_pred             eccccchhhhhcchh
Confidence            7  777788888775

>KOG2395|consensus

Probab=97.87  E-value=0.00054  Score=52.21  Aligned_cols=145  Identities=11%  Similarity=0.188  Sum_probs=91.4

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCE-------EEEecCCCeEEEEECCCCeeeEEEEeecccc
Q psy10662         48 IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY-------VACGSENNSLYIYYKGLSKHMHAYRFDTVRS  120 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  120 (221)
                      |.++.....++-.|++.|+.+...+-+.. |+-+.+.|+.+.       -+.|=.++.|.-||++-...- .+.+.... 
T Consensus       349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~-kl~~~q~k-  425 (644)
T KOG2395|consen  349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN-KLAVVQSK-  425 (644)
T ss_pred             eeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc-eeeeeecc-
Confidence            44666677888899999999988876665 778888887542       234445777888998732220 11111000 


Q ss_pred             eeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662        121 MLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR  200 (221)
Q Consensus       121 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  200 (221)
                          .+ .......|++-..+| +|++|+.+|.|++||. .+....              ..+.+-..+|..+..+.+|+
T Consensus       426 ----qy-~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AK--------------TAlPgLG~~I~hVdvtadGK  484 (644)
T KOG2395|consen  426 ----QY-STKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAK--------------TALPGLGDAIKHVDVTADGK  484 (644)
T ss_pred             ----cc-ccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhh--------------hcccccCCceeeEEeeccCc
Confidence                00 112233445444454 8999999999999985 222111              12235677899999999999


Q ss_pred             EEEEecCCCeEEEEECC
Q psy10662        201 VLVAANSQGIIKIYVIP  217 (221)
Q Consensus       201 ~l~~~~~dg~i~iw~~~  217 (221)
                      +|++.+ +..+.+.++.
T Consensus       485 wil~Tc-~tyLlLi~t~  500 (644)
T KOG2395|consen  485 WILATC-KTYLLLIDTL  500 (644)
T ss_pred             EEEEec-ccEEEEEEEe
Confidence            988876 4456655543

>PHA02713 hypothetical protein; Provisional

Probab=97.84  E-value=0.0025  Score=50.79  Aligned_cols=23  Identities=0%  Similarity=0.002  Sum_probs=18.0

Q ss_pred             CCcEEEEecCCC--eEEEEECCccc
Q psy10662        198 LSRVLVAANSQG--IIKIYVIPIRV  220 (221)
Q Consensus       198 ~~~~l~~~~~dg--~i~iw~~~~~~  220 (221)
                      +|++.++|+.||  .+..||..+.+
T Consensus       512 ~~~iyv~Gg~~~~~~~e~yd~~~~~  536 (557)
T PHA02713        512 DNTIMMLHCYESYMLQDTFNVYTYE  536 (557)
T ss_pred             CCEEEEEeeecceeehhhcCccccc
Confidence            678888888888  77788877654

>KOG2395|consensus

Probab=97.82  E-value=0.00054  Score=52.24  Aligned_cols=139  Identities=12%  Similarity=0.177  Sum_probs=92.3

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC--------cEEEecCCCcEEEEEcCCCcc--ceeeecc
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE--------DIVSASTDSQLKLWNINKPNC--LRSFVGH   74 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~l~s~~~d~~v~~wd~~~~~~--~~~~~~~   74 (221)
                      +|.++.....++--|++ .++.+..+.-+.+ |.-+.+.|+.        .-+.|-.|..|.-||.+-...  +..-..|
T Consensus       348 il~~~~~~~~l~klDIE-~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~k  425 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIE-RGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSK  425 (644)
T ss_pred             EeeCCCCcCcceeeecc-cceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecc
Confidence            34455556677778888 7899999987766 6667776532        244566688899999874322  1111222


Q ss_pred             ----ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         75 ----INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        75 ----~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                          ...-.|++-..+ .++++|+.+|.|++||- .+..-++            .+++...+|..+..+.+|++|++.+ 
T Consensus       426 qy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdr-i~~~AKT------------AlPgLG~~I~hVdvtadGKwil~Tc-  490 (644)
T KOG2395|consen  426 QYSTKNNFSCFATTES-GYIVVGSLKGDIRLYDR-IGRRAKT------------ALPGLGDAIKHVDVTADGKWILATC-  490 (644)
T ss_pred             ccccccccceeeecCC-ceEEEeecCCcEEeehh-hhhhhhh------------cccccCCceeeEEeeccCcEEEEec-
Confidence                123345554444 48999999999999985 3333222            3677888999999999999988655 


Q ss_pred             CCeEEEEEcC
Q psy10662        151 NNSLYIYYKG  160 (221)
Q Consensus       151 d~~i~~~d~~  160 (221)
                      +..+.+-++.
T Consensus       491 ~tyLlLi~t~  500 (644)
T KOG2395|consen  491 KTYLLLIDTL  500 (644)
T ss_pred             ccEEEEEEEe
Confidence            4566666653

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.80  E-value=0.011  Score=46.86  Aligned_cols=159  Identities=14%  Similarity=0.152  Sum_probs=90.7

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCc-eEEEEEec---CCcEEEec------CCCcEEEEEcCCCccceeeec
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKA-VSYVKFLN---KEDIVSAS------TDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~-i~~~~~~~---~~~l~s~~------~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      ..++.++.|+.|.-.|.. +++.+......... -..+.-+|   ++.++.+.      .+|.|..+|.++++.+-.+..
T Consensus       121 ~~v~v~t~dg~l~ALDa~-TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~  199 (527)
T TIGR03075       121 GKVFFGTLDARLVALDAK-TGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYT  199 (527)
T ss_pred             CEEEEEcCCCEEEEEECC-CCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence            456777889999999987 67776654421100 00111112   45666553      268999999999877654321


Q ss_pred             cc-------------------------------cce-eEEEEeCCCCEEEEecCC-----C-----------eEEEEECC
Q psy10662         74 HI-------------------------------NDK-NFVGLATDGDYVACGSEN-----N-----------SLYIYYKG  105 (221)
Q Consensus        74 ~~-------------------------------~~v-~~~~~~~~~~~l~~~~~d-----~-----------~v~iwd~~  105 (221)
                      -.                               ..+ ..+.+.|+..++..+..+     +           .|.-.|++
T Consensus       200 ~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~  279 (527)
T TIGR03075       200 VPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPD  279 (527)
T ss_pred             cCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccc
Confidence            10                               011 133566666655554422     1           56677888


Q ss_pred             CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC---EEEEecCCCeEEEEEcCCCCceee
Q psy10662        106 LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHA  167 (221)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~  167 (221)
                      +++....++.-....-   .+.. .....-+.+..+|+   .++.+..+|.+++.|.++++.+..
T Consensus       280 TG~~~W~~Q~~~~D~w---D~d~-~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~  340 (527)
T TIGR03075       280 TGKIKWHYQTTPHDEW---DYDG-VNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSA  340 (527)
T ss_pred             cCCEEEeeeCCCCCCc---cccC-CCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceecc
Confidence            8888776642110000   0000 01112233334665   788999999999999999988643

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG4649|consensus

Probab=97.79  E-value=0.0052  Score=42.98  Aligned_cols=108  Identities=14%  Similarity=0.168  Sum_probs=77.7

Q ss_pred             CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEee
Q psy10662         46 EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESS  125 (221)
Q Consensus        46 ~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~  125 (221)
                      ..++.|+..+.+.--|..+++.+-+-. ...++.+-+.- -|++++.|+..|.+.+.+..+++....+.           
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~-----------   90 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFV-----------   90 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeee-----------
Confidence            457788889999999998887765431 22333333332 36789999999999999999997776551           


Q ss_pred             EEEeeCceE-EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee
Q psy10662        126 FVGHINDKN-FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       126 ~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~  169 (221)
                        . ...|. .....+++.+|..|+.|+..+..|.++...+...+
T Consensus        91 --~-~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk  132 (354)
T KOG4649|consen   91 --I-LETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK  132 (354)
T ss_pred             --e-hhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence              1 12222 23457889999999999999999998887765543

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.77  E-value=0.0023  Score=48.41  Aligned_cols=133  Identities=13%  Similarity=0.133  Sum_probs=79.7

Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeE------EEEe---------------e------cc---cceeEeeE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH------AYRF---------------D------TV---RSMLESSF  126 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~------~~~~---------------~------~~---~~~~~~~~  126 (221)
                      .|+.+.|.++..-|+++...|.|.+|.....+.-.      ..+.               +      ..   ...+..-+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            47889999998899999999999999654433221      0000               0      00   01112223


Q ss_pred             EEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-----CC--
Q psy10662        127 VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-----LS--  199 (221)
Q Consensus       127 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~--  199 (221)
                      ....++|++++.+.- -++++|.++|.+.|.|++....++.-....       ..........|+++.|+.     |+  
T Consensus        83 ~~~~g~vtal~~S~i-GFvaigy~~G~l~viD~RGPavI~~~~i~~-------~~~~~~~~~~vt~ieF~vm~~~~D~yS  154 (395)
T PF08596_consen   83 DAKQGPVTALKNSDI-GFVAIGYESGSLVVIDLRGPAVIYNENIRE-------SFLSKSSSSYVTSIEFSVMTLGGDGYS  154 (395)
T ss_dssp             ---S-SEEEEEE-BT-SEEEEEETTSEEEEEETTTTEEEEEEEGGG---------T-SS----EEEEEEEEEE-TTSSSE
T ss_pred             eccCCcEeEEecCCC-cEEEEEecCCcEEEEECCCCeEEeeccccc-------cccccccccCeeEEEEEEEecCCCccc
Confidence            345788999998754 499999999999999998887776543222       001112344577777762     33  


Q ss_pred             -cEEEEecCCCeEEEEECC
Q psy10662        200 -RVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       200 -~~l~~~~~dg~i~iw~~~  217 (221)
                       -.|++|+..|.+.+|.+.
T Consensus       155 Si~L~vGTn~G~v~~fkIl  173 (395)
T PF08596_consen  155 SICLLVGTNSGNVLTFKIL  173 (395)
T ss_dssp             EEEEEEEETTSEEEEEEEE
T ss_pred             ceEEEEEeCCCCEEEEEEe
Confidence             478888999999999874

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG2444|consensus

Probab=97.75  E-value=0.00011  Score=49.90  Aligned_cols=103  Identities=12%  Similarity=0.090  Sum_probs=62.3

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccc-ccee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHI-NDKN   79 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~   79 (221)
                      +..+++|+.+|.|.+|.....+........-...|-++--.-  +....+++.||.|+.|++.-.+.+...-.|. .++.
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e  149 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGE  149 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcc
Confidence            356889999999999987633332222222233344433222  3357788999999999998777766555555 3444


Q ss_pred             EEEEeCCCCEEEEe--cCCCeEEEEECC
Q psy10662         80 FVGLATDGDYVACG--SENNSLYIYYKG  105 (221)
Q Consensus        80 ~~~~~~~~~~l~~~--~~d~~v~iwd~~  105 (221)
                      .......+.+++.+  |.|..++.|++.
T Consensus       150 ~~ivv~sd~~i~~a~~S~d~~~k~W~ve  177 (238)
T KOG2444|consen  150 ELIVVGSDEFLKIADTSHDRVLKKWNVE  177 (238)
T ss_pred             eeEEecCCceEEeeccccchhhhhcchh
Confidence            44444444555555  555556666554

>KOG2079|consensus

Probab=97.72  E-value=0.00038  Score=57.23  Aligned_cols=98  Identities=13%  Similarity=0.199  Sum_probs=68.1

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeeccccceeEEE-
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG-   82 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~-   82 (221)
                      .++.|+..|.|-..|+..+-.+...-..-.++|++++|+.++ .++.|-.+|.|.+||+..++.++.+..|..+.+.+- 
T Consensus       101 ~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~  180 (1206)
T KOG2079|consen  101 PIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIF  180 (1206)
T ss_pred             eEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEE
Confidence            477788888888888763222222222345789999999654 566777899999999999999988877766555443 


Q ss_pred             --EeCCCCEEEEecCCCeEEEEEC
Q psy10662         83 --LATDGDYVACGSENNSLYIYYK  104 (221)
Q Consensus        83 --~~~~~~~l~~~~~d~~v~iwd~  104 (221)
                        +..++..+.++...|.  +|.+
T Consensus       181 v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  181 VGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             EEEeCCCcEEEEccCCCc--eEEE
Confidence              3345556777777775  5654

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.72  E-value=0.00021  Score=36.10  Aligned_cols=33  Identities=15%  Similarity=0.342  Sum_probs=29.2

Q ss_pred             ccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        187 NEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       187 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ...|..++|+|...+||.++.+|.|.++.+.-.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~q   43 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLNWQ   43 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEECCCc
Confidence            456899999999999999999999999999543

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.69  E-value=0.013  Score=44.86  Aligned_cols=40  Identities=10%  Similarity=0.290  Sum_probs=32.5

Q ss_pred             eCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee
Q psy10662        130 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~  169 (221)
                      .+++..+++||+++++|.-..+|.+.+....-.+....++
T Consensus       216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~  255 (410)
T PF04841_consen  216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFD  255 (410)
T ss_pred             CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEee
Confidence            4579999999999999999999999998766655555544

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG2079|consensus

Probab=97.69  E-value=0.00038  Score=57.19  Aligned_cols=105  Identities=10%  Similarity=0.026  Sum_probs=72.8

Q ss_pred             CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCce
Q psy10662         86 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHM  165 (221)
Q Consensus        86 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~  165 (221)
                      .+..++.|+..|.+...|+...-..  +          ..-....++|++++|+.+|+.++.|-.+|.|.+||...++..
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL~~--~----------~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l  165 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNLGP--L----------HQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKIL  165 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcccch--h----------hcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcce
Confidence            3557888888898988887643110  0          011234578999999999999999999999999999998887


Q ss_pred             eeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        166 HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      ..+....            .....|..+.+..++..++++...|.  +|++
T Consensus       166 ~~i~e~~------------ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  166 KVITEHG------------APVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             eeeeecC------------CccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            7775322            11223444555556667777777775  5654

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.68  E-value=0.013  Score=44.50  Aligned_cols=158  Identities=11%  Similarity=0.030  Sum_probs=102.0

Q ss_pred             eEEEEEec-CC-cEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecC---CCeEEEEECCCCeeeE
Q psy10662         37 VSYVKFLN-KE-DIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSE---NNSLYIYYKGLSKHMH  111 (221)
Q Consensus        37 i~~~~~~~-~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~~~~~  111 (221)
                      -..++.++ +. .++....++.|.+.|..+.+.......-. ....++++|+++.+..+..   ++.+.+.|..+.+...
T Consensus        76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~  154 (381)
T COG3391          76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTA  154 (381)
T ss_pred             ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEE
Confidence            34556664 33 35566667999999987777666553222 5678999999987655443   6889999888877765


Q ss_pred             EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662        112 AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV  190 (221)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  190 (221)
                      ..             ..-..+ ..++++|+|+.+++.. .++.|.+.|........ -.          ......-....
T Consensus       155 ~~-------------~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~----------~~~~~~~~~~P  209 (381)
T COG3391         155 TI-------------PVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GS----------VGSLVGVGTGP  209 (381)
T ss_pred             EE-------------ecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cc----------cccccccCCCC
Confidence            53             111122 7899999999666555 78899999965544331 00          00000112234


Q ss_pred             eEEEEcCCCcEEEEecCC---CeEEEEECCccc
Q psy10662        191 SAVCWRQLSRVLVAANSQ---GIIKIYVIPIRV  220 (221)
Q Consensus       191 ~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~  220 (221)
                      ..+.++|+|.+++.....   +.+...|..++.
T Consensus       210 ~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~  242 (381)
T COG3391         210 AGIAVDPDGNRVYVANDGSGSNNVLKIDTATGN  242 (381)
T ss_pred             ceEEECCCCCEEEEEeccCCCceEEEEeCCCce
Confidence            578899999977665543   588888877654

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.64  E-value=0.00027  Score=35.74  Aligned_cols=30  Identities=17%  Similarity=0.299  Sum_probs=27.9

Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEEC
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYK  104 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~  104 (221)
                      ...|.+++|+|..+++|.++.+|.|.+|.+
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl   40 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL   40 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence            456999999999999999999999999987

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.61  E-value=0.014  Score=42.76  Aligned_cols=149  Identities=9%  Similarity=0.008  Sum_probs=84.9

Q ss_pred             ceEEEEEecCCcEEEecCCC----------cEEEEEcC-CCccceeeeccccceeEEEEeCCCCEEEEe-cCCCeEEEEE
Q psy10662         36 AVSYVKFLNKEDIVSASTDS----------QLKLWNIN-KPNCLRSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYY  103 (221)
Q Consensus        36 ~i~~~~~~~~~~l~s~~~d~----------~v~~wd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd  103 (221)
                      ..+.+...|++.+..+....          .=.+|-+. .+..++.+..+-..-+.++|+|+++.+..+ +..+.|.-|+
T Consensus       112 r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~  191 (307)
T COG3386         112 RPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYD  191 (307)
T ss_pred             CCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEe
Confidence            34556666666666654440          11344443 444554444445556889999999876555 4457888887


Q ss_pred             CCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-eEEEEEcCCCCceeeeeeeccccccccccc
Q psy10662        104 KGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-SLYIYYKGLSKHMHAYRFDTVRSMLERDRN  182 (221)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  182 (221)
                      +.....      ...............+..-.++...+|.+.+++..+| .|.+|+.+ ++.+..+...           
T Consensus       192 ~d~~~g------~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP-----------  253 (307)
T COG3386         192 LDPATG------PIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLP-----------  253 (307)
T ss_pred             cCcccC------ccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECC-----------
Confidence            653000      0011111112223445666788888888775555554 89999887 7777666522           


Q ss_pred             ccccccceeEEEEc-CCCcEEEEec
Q psy10662        183 EDDTNEFVSAVCWR-QLSRVLVAAN  206 (221)
Q Consensus       183 ~~~~~~~v~~~~~~-~~~~~l~~~~  206 (221)
                          ...+++++|- |+.+.|+..+
T Consensus       254 ----~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         254 ----VKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             ----CCCCccceEeCCCcCEEEEEe
Confidence                1356677774 3445554444

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.56  E-value=0.019  Score=43.12  Aligned_cols=93  Identities=15%  Similarity=0.137  Sum_probs=59.1

Q ss_pred             CCCceEEEEe---------CCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee
Q psy10662          1 MNSCHLAFGS---------ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~---------~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      ||+++++...         ..+.+.|||++ +++... +......+....|+|++..++--.++.|.+++..+++..+..
T Consensus         2 ~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~-~~~~~~-l~~~~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~~lT   79 (353)
T PF00930_consen    2 PDGKFVLFATNYTKQWRHSFKGDYYIYDIE-TGEITP-LTPPPPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQETQLT   79 (353)
T ss_dssp             TTSSEEEEEEEEEEESSSEEEEEEEEEETT-TTEEEE-SS-EETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEEESE
T ss_pred             CCCCeEEEEECcEEeeeeccceeEEEEecC-CCceEE-CcCCccccccceeecCCCeeEEEecCceEEEECCCCCeEEec
Confidence            6777777632         24678899998 444333 222267789999999877666667889999998766443221


Q ss_pred             -ec-------c---------ccceeEEEEeCCCCEEEEecC
Q psy10662         72 -VG-------H---------INDKNFVGLATDGDYVACGSE   95 (221)
Q Consensus        72 -~~-------~---------~~~v~~~~~~~~~~~l~~~~~   95 (221)
                       .+       -         -+.-..+.|+|++++|+....
T Consensus        80 ~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~  120 (353)
T PF00930_consen   80 TDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRF  120 (353)
T ss_dssp             S--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred             cccceeEEcCccceeccccccccccceEECCCCCEEEEEEE
Confidence             11       0         112367889999998877654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.55  E-value=0.011  Score=47.28  Aligned_cols=161  Identities=11%  Similarity=0.078  Sum_probs=81.0

Q ss_pred             CceEEEEEecCCc-EEEec------CCC--cEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCC-CeEEEEEC
Q psy10662         35 KAVSYVKFLNKED-IVSAS------TDS--QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSEN-NSLYIYYK  104 (221)
Q Consensus        35 ~~i~~~~~~~~~~-l~s~~------~d~--~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~v~iwd~  104 (221)
                      ..+.+.+.+|++. ++..-      .|+  .+.+++. .+.. ..+.. ......-.|+|+|+.+++.... ..+++.+-
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~-~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~  426 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVA-VQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIRD  426 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcc-eeeec-CCCCCCceECCCCCceEEEecCcceEEEecc
Confidence            3577888887554 33322      244  4445454 2222 33322 2237888999998887776543 22333332


Q ss_pred             CCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE---EEcCCCCceeeeeeecccccccccc
Q psy10662        105 GLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI---YYKGLSKHMHAYRFDTVRSMLERDR  181 (221)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~---~d~~~~~~~~~~~~~~~~~~~~~~~  181 (221)
                      .....+.....+  ......   .....|..+.|+|||..++... ++.|++   -....+.  ..+         ....
T Consensus       427 ~~~gql~~~~vd--~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~--~~l---------~~~~  489 (591)
T PRK13616        427 PATGQLARTPVD--ASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ--YAL---------TNPR  489 (591)
T ss_pred             CCCceEEEEecc--Cchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc--eee---------cccE
Confidence            222222221111  111111   2245699999999999887655 466766   3322222  111         0000


Q ss_pred             cc-cccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        182 NE-DDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       182 ~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      .+ ..-...+.++.|..++.++ .+..++.-.+|.+
T Consensus       490 ~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v  524 (591)
T PRK13616        490 EVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV  524 (591)
T ss_pred             EeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence            01 1122335778999998865 4444444445554

>KOG4441|consensus

Probab=97.48  E-value=0.021  Score=45.69  Aligned_cols=103  Identities=20%  Similarity=0.215  Sum_probs=59.0

Q ss_pred             CceEEEEeCCC------eEEEEEecCCc-eeeEEEEeccCceEEEEEecCCcEEEecCC------CcEEEEEcCCCccce
Q psy10662          3 SCHLAFGSADH------CVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNKEDIVSASTD------SQLKLWNINKPNCLR   69 (221)
Q Consensus         3 ~~~l~~~~~dg------~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d------~~v~~wd~~~~~~~~   69 (221)
                      +.+++.|+.++      .+..||..+.. .....+. ....-.+++..++..+++|+.|      .++..||..+.+-..
T Consensus       285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~  363 (571)
T KOG4441|consen  285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP  363 (571)
T ss_pred             CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceec
Confidence            45677777773      67788877331 2222233 2333556666677778899988      357788887765332


Q ss_pred             --eeeccccceeEEEEeCCCCEEEEecCCCe-----EEEEECCCCe
Q psy10662         70 --SFVGHINDKNFVGLATDGDYVACGSENNS-----LYIYYKGLSK  108 (221)
Q Consensus        70 --~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----v~iwd~~~~~  108 (221)
                        .+...........+  +|...+.|+.||.     +-.||..+.+
T Consensus       364 ~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~  407 (571)
T KOG4441|consen  364 VAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNK  407 (571)
T ss_pred             cCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCc
Confidence              11111111122222  5778889998863     6667766544

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.42  E-value=0.026  Score=41.34  Aligned_cols=186  Identities=12%  Similarity=0.058  Sum_probs=93.9

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCccceeeec-----ccccee
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPNCLRSFVG-----HINDKN   79 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~-----~~~~v~   79 (221)
                      +.+--..+.|.-|+.. +++ ...+. +.+.+.++... .++.|+++..  -+.+++.+++..+..+..     .....+
T Consensus        40 ~w~DI~~~~i~r~~~~-~g~-~~~~~-~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~~~~~r~N  114 (307)
T COG3386          40 LWVDILGGRIHRLDPE-TGK-KRVFP-SPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPEDGLPLNRPN  114 (307)
T ss_pred             EEEeCCCCeEEEecCC-cCc-eEEEE-CCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccCCCCcCCCC
Confidence            3344445566666665 221 23333 33334444433 4566666543  345556555544222211     123457


Q ss_pred             EEEEeCCCCEEEEecCC---------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         80 FVGLATDGDYVACGSEN---------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d---------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      .....|+|.+.++....         ..-.+|-+.           + ....++....+-...+.++||||++.+.....
T Consensus       115 D~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~-----------p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT  182 (307)
T COG3386         115 DGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVD-----------P-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADT  182 (307)
T ss_pred             ceeEcCCCCEEEeCCCccccCccccCCcceEEEEc-----------C-CCCEEEeecCcEEecCceEECCCCCEEEEEeC
Confidence            78888998877665441         001222222           1 12222223344455678999999987776655


Q ss_pred             -CCeEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC-eEEEEECC
Q psy10662        151 -NNSLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG-IIKIYVIP  217 (221)
Q Consensus       151 -d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iw~~~  217 (221)
                       .+.|.-|++.. .....       ...  ............-.++...+|.+-+++-.+| .|..|+.+
T Consensus       183 ~~~~i~r~~~d~~~g~~~-------~~~--~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd  243 (307)
T COG3386         183 PANRIHRYDLDPATGPIG-------GRR--GFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD  243 (307)
T ss_pred             CCCeEEEEecCcccCccC-------Ccc--eEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC
Confidence             47788887653 11000       000  0001111233445677777887775544443 78888776

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.41  E-value=0.025  Score=40.82  Aligned_cols=154  Identities=10%  Similarity=0.164  Sum_probs=84.4

Q ss_pred             cCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeeccccee-
Q psy10662         44 NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML-  122 (221)
Q Consensus        44 ~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-  122 (221)
                      .++.|+.|..+| +.++++........+. +...|..+...|+-+.+++-+ |+.+.++++..-....... ....... 
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~-~~~~~~~~   81 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSA-PLAFPKSR   81 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccc-cccccccc
Confidence            356788998888 9999984333333332 333499999999888776665 4899999987655443210 0000000 


Q ss_pred             -EeeEEEeeCceEEEE--EecCCCEEEEecCCCeEEEEEcCCCC-----ceeeeeeecccccccccccccccccceeEEE
Q psy10662        123 -ESSFVGHINDKNFVG--LATDGDYVACGSENNSLYIYYKGLSK-----HMHAYRFDTVRSMLERDRNEDDTNEFVSAVC  194 (221)
Q Consensus       123 -~~~~~~~~~~v~~~~--~~~~~~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  194 (221)
                       ..........+..++  -.+.+...++....+.|.+|......     ....+                .-...+.+++
T Consensus        82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~----------------~lp~~~~~i~  145 (275)
T PF00780_consen   82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEI----------------SLPDPPSSIA  145 (275)
T ss_pred             cccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEE----------------EcCCCcEEEE
Confidence             000011122233333  12233344444455588888765531     11122                1234678888


Q ss_pred             EcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        195 WRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       195 ~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |.  ++.++.|..++ ..+.|+.++.
T Consensus       146 ~~--~~~i~v~~~~~-f~~idl~~~~  168 (275)
T PF00780_consen  146 FL--GNKICVGTSKG-FYLIDLNTGS  168 (275)
T ss_pred             Ee--CCEEEEEeCCc-eEEEecCCCC
Confidence            87  55677765444 6777877543

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PHA03098 kelch-like protein; Provisional

Probab=97.40  E-value=0.04  Score=43.93  Aligned_cols=64  Identities=9%  Similarity=0.095  Sum_probs=32.5

Q ss_pred             cCCcEEEecCC-----CcEEEEEcCCCccce--eeeccccceeEEEEeCCCCEEEEecCC------CeEEEEECCCCee
Q psy10662         44 NKEDIVSASTD-----SQLKLWNINKPNCLR--SFVGHINDKNFVGLATDGDYVACGSEN------NSLYIYYKGLSKH  109 (221)
Q Consensus        44 ~~~~l~s~~~d-----~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~  109 (221)
                      .+..++.||.+     ..+..||..+.+...  .+. +...-.+++ .-++..++.||.+      ..+..||+.+.+.
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp-~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W  418 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLI-FPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKW  418 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcC-cCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCee
Confidence            45556677765     346778876654321  111 111111222 2245666666632      3577888776554

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.39  E-value=0.025  Score=40.45  Aligned_cols=178  Identities=10%  Similarity=0.081  Sum_probs=105.0

Q ss_pred             eccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecc-ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee
Q psy10662         32 GHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGH-INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH  109 (221)
Q Consensus        32 ~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  109 (221)
                      +-...+.++.|+|+ +.|++....+.-.++=-.+|+.++.+.-. -.....+.+..++.+.++--.++.+.++.+.....
T Consensus        83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~  162 (316)
T COG3204          83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTT  162 (316)
T ss_pred             cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCcc
Confidence            33455999999985 56888888888888877788888876311 22345677777788888877888888887665533


Q ss_pred             eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662        110 MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF  189 (221)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (221)
                      .....  .. ...+......+...-.++|+|....|..+-+..-+.||..................   .  ...-.-..
T Consensus       163 ~~~~~--~~-~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~---~--~~~~f~~D  234 (316)
T COG3204         163 VISAK--VQ-KIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPT---A--DRDLFVLD  234 (316)
T ss_pred             EEecc--ce-EEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcc---c--ccceEeec
Confidence            32210  00 11111111224456679999999888888888888888765332111110000000   0  00001224


Q ss_pred             eeEEEEcCC-CcEEEEecCCCeEEEEECC
Q psy10662        190 VSAVCWRQL-SRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       190 v~~~~~~~~-~~~l~~~~~dg~i~iw~~~  217 (221)
                      |.++.|++. +.+|+-+.+++.+.-.+..
T Consensus       235 vSgl~~~~~~~~LLVLS~ESr~l~Evd~~  263 (316)
T COG3204         235 VSGLEFNAITNSLLVLSDESRRLLEVDLS  263 (316)
T ss_pred             cccceecCCCCcEEEEecCCceEEEEecC
Confidence            677788864 4555555566666555554

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=97.25  E-value=0.054  Score=43.49  Aligned_cols=118  Identities=13%  Similarity=0.084  Sum_probs=69.8

Q ss_pred             eEEEEEecCCcEEEec-CCCcEEEEEcCCCccceeee-ccccceeEEEEe--CCCCEEEEecCCCeEEEEECCCCeeeEE
Q psy10662         37 VSYVKFLNKEDIVSAS-TDSQLKLWNINKPNCLRSFV-GHINDKNFVGLA--TDGDYVACGSENNSLYIYYKGLSKHMHA  112 (221)
Q Consensus        37 i~~~~~~~~~~l~s~~-~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~d~~v~iwd~~~~~~~~~  112 (221)
                      +.-+.-+.-+.++... ....+.|||.+.+.....-. ...+.|..+.|.  |+++.+++.|..+.|.+|--....... 
T Consensus        32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~-  110 (631)
T PF12234_consen   32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN-  110 (631)
T ss_pred             cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc-
Confidence            3333333334444444 34579999998876433221 346789999994  788888888899999998532110000 


Q ss_pred             EEeecccceeEee--EEEee-CceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662        113 YRFDTVRSMLESS--FVGHI-NDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus       113 ~~~~~~~~~~~~~--~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                         .......++.  +..+. .+|....|.++|.+++.++  +.+.++|-.
T Consensus       111 ---~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~  156 (631)
T PF12234_consen  111 ---KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW  156 (631)
T ss_pred             ---CCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence               0001111111  22333 5788899999998776554  468888743

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.23  E-value=0.029  Score=42.18  Aligned_cols=100  Identities=14%  Similarity=0.162  Sum_probs=57.5

Q ss_pred             CCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE-----E
Q psy10662         54 DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV-----G  128 (221)
Q Consensus        54 d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~  128 (221)
                      .+.+.+||+++++...... ....+....|+|+|+.++... ++.|.+.+..+++..+ +..+-... ......     .
T Consensus        22 ~~~y~i~d~~~~~~~~l~~-~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~-lT~dg~~~-i~nG~~dwvyeE   97 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTP-PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQ-LTTDGEPG-IYNGVPDWVYEE   97 (353)
T ss_dssp             EEEEEEEETTTTEEEESS--EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEE-SES--TTT-EEESB--HHHHH
T ss_pred             ceeEEEEecCCCceEECcC-CccccccceeecCCCeeEEEe-cCceEEEECCCCCeEE-ecccccee-EEcCccceeccc
Confidence            4578899998876544333 256789999999999988775 5679999887774432 21121111 000000     0


Q ss_pred             e-eCceEEEEEecCCCEEEEecCC-CeEEEE
Q psy10662        129 H-INDKNFVGLATDGDYVACGSEN-NSLYIY  157 (221)
Q Consensus       129 ~-~~~v~~~~~~~~~~~l~~~~~d-~~i~~~  157 (221)
                      . -..-..+-||||+++|+....| ..|..+
T Consensus        98 Ev~~~~~~~~WSpd~~~la~~~~d~~~v~~~  128 (353)
T PF00930_consen   98 EVFDRRSAVWWSPDSKYLAFLRFDEREVPEY  128 (353)
T ss_dssp             HTSSSSBSEEE-TTSSEEEEEEEE-TTS-EE
T ss_pred             cccccccceEECCCCCEEEEEEECCcCCceE
Confidence            0 1123468899999998876543 344443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.22  E-value=0.078  Score=42.70  Aligned_cols=141  Identities=13%  Similarity=0.084  Sum_probs=74.5

Q ss_pred             CCCceEEEEe------CCC--eEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCC------------CcEEE
Q psy10662          1 MNSCHLAFGS------ADH--CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTD------------SQLKL   59 (221)
Q Consensus         1 ~~~~~l~~~~------~dg--~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d------------~~v~~   59 (221)
                      |||+.+|...      .|+  .|.+++..  +.......+  ...+.-.|+|+ +.+++....            +.+.+
T Consensus       359 pdG~~vA~v~~~~~~~~d~~s~Lwv~~~g--g~~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~  434 (591)
T PRK13616        359 RSGRQVAAVVTLGRGAPDPASSLWVGPLG--GVAVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLAR  434 (591)
T ss_pred             CCCCEEEEEEeecCCCCCcceEEEEEeCC--CcceeeecC--CCCCCceECCCCCceEEEecCcceEEEeccCCCceEEE
Confidence            5677666554      243  44444532  222222222  23778889986 555555322            33444


Q ss_pred             EEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEE---EECCCCeeeEEEEeecccceeEeeEE-EeeCceEE
Q psy10662         60 WNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYI---YYKGLSKHMHAYRFDTVRSMLESSFV-GHINDKNF  135 (221)
Q Consensus        60 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i---wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~  135 (221)
                      .++..++...   ...+.|..+.|+|||..++... ++.|.+   -....++  ..+    .   ....+. .....+..
T Consensus       435 ~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~--~~l----~---~~~~l~~~l~~~~~~  501 (591)
T PRK13616        435 TPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ--YAL----T---NPREVGPGLGDTAVS  501 (591)
T ss_pred             EeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc--eee----c---ccEEeecccCCcccc
Confidence            4554443322   2355799999999999877655 466665   3323332  111    0   001111 22233578


Q ss_pred             EEEecCCCEEEEecCCCeEEEEEc
Q psy10662        136 VGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus       136 ~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +.|.+++.++ ++..++...+|.+
T Consensus       502 l~W~~~~~L~-V~~~~~~~~v~~v  524 (591)
T PRK13616        502 LDWRTGDSLV-VGRSDPEHPVWYV  524 (591)
T ss_pred             ceEecCCEEE-EEecCCCCceEEE
Confidence            8999998855 5555554555544

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.19  E-value=0.031  Score=42.99  Aligned_cols=116  Identities=15%  Similarity=0.114  Sum_probs=67.8

Q ss_pred             eeEEEEeCCCCEEEEe-cC----CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC-
Q psy10662         78 KNFVGLATDGDYVACG-SE----NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN-  151 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~-~~----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  151 (221)
                      +....++|+++++|.+ +.    ...++++|+.+++.+...            +....  ...+.|.++++.|+....+ 
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~------------i~~~~--~~~~~W~~d~~~~~y~~~~~  191 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDG------------IENPK--FSSVSWSDDGKGFFYTRFDE  191 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEE------------EEEEE--SEEEEECTTSSEEEEEECST
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCc------------ccccc--cceEEEeCCCCEEEEEEeCc
Confidence            4467889999987644 22    246999999999765431            12211  2239999998876554422 


Q ss_pred             ----------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC---C-CeEEEEECC
Q psy10662        152 ----------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS---Q-GIIKIYVIP  217 (221)
Q Consensus       152 ----------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d-g~i~iw~~~  217 (221)
                                ..|+.|.+.+......+-|..           .........+..++|+++|+..+.   + ..+.+.++.
T Consensus       192 ~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~-----------~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~  260 (414)
T PF02897_consen  192 DQRTSDSGYPRQVYRHKLGTPQSEDELVFEE-----------PDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLD  260 (414)
T ss_dssp             TTSS-CCGCCEEEEEEETTS-GGG-EEEEC------------TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECC
T ss_pred             ccccccCCCCcEEEEEECCCChHhCeeEEee-----------cCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecc
Confidence                      236777776654432222221           111122567889999999876442   3 456777766


Q ss_pred             c
Q psy10662        218 I  218 (221)
Q Consensus       218 ~  218 (221)
                      .
T Consensus       261 ~  261 (414)
T PF02897_consen  261 D  261 (414)
T ss_dssp             C
T ss_pred             c
Confidence            5

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=97.18  E-value=0.038  Score=44.31  Aligned_cols=118  Identities=9%  Similarity=0.085  Sum_probs=69.5

Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe--cCCCEEEEecCCCeEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA--TDGDYVACGSENNSLY  155 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~  155 (221)
                      ..-+.-+.-++..++-+....+.|||.+.+..-.+-           .+ .....|..++|.  |+++.+++.|..+.|.
T Consensus        32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~-----------~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~   99 (631)
T PF12234_consen   32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEE-----------SF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVL   99 (631)
T ss_pred             cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEee-----------ee-cCCCceeeceeeecCCCCEEEEEEcCcEEE
Confidence            334444444444444444557999999877643321           12 346778889884  7999999999999999


Q ss_pred             EEEcCCCCceeeeeeeccccccccccc--cccc-ccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRN--EDDT-NEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      +|.-....      +......+..+..  ...+ ..+|.+.+|.++|.++++++  +.+.+++
T Consensus       100 l~~Q~R~d------y~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~d  154 (631)
T PF12234_consen  100 LYTQLRYD------YTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFD  154 (631)
T ss_pred             EEEccchh------hhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEEC
Confidence            98532111      0011111111111  1122 24789999999998776653  4677765

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG2280|consensus

Probab=97.16  E-value=0.014  Score=46.85  Aligned_cols=150  Identities=9%  Similarity=0.153  Sum_probs=83.2

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcccee--e--eccccceeEEEEeCCCCE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRS--F--VGHINDKNFVGLATDGDY   89 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~--~--~~~~~~v~~~~~~~~~~~   89 (221)
                      .|+||+..  ++++..+....+.+..+.|+.+..|+....+|++++|++-. +.+..  .  ......|..+.+..+|-.
T Consensus        65 ~I~If~~s--G~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~g-e~ie~~svg~e~~~~~I~ec~~f~~GVa  141 (829)
T KOG2280|consen   65 YIRIFNIS--GQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLLG-EFIESNSVGFESQMSDIVECRFFHNGVA  141 (829)
T ss_pred             eEEEEecc--ccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecch-hhhcccccccccccCceeEEEEecCceE
Confidence            36666654  55555554445588999999999999999999999999843 22222  1  112223444444444433


Q ss_pred             EEEecCCCeEEEE-ECCCCeeeEEE-----------Eeec----ccceeE---------------------eeEEEeeCc
Q psy10662         90 VACGSENNSLYIY-YKGLSKHMHAY-----------RFDT----VRSMLE---------------------SSFVGHIND  132 (221)
Q Consensus        90 l~~~~~d~~v~iw-d~~~~~~~~~~-----------~~~~----~~~~~~---------------------~~~~~~~~~  132 (221)
                      +.+.  +|.+.+- +..... ++..           .|..    .+...+                     ..+....+.
T Consensus       142 vlt~--~g~v~~i~~~~~~~-~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~~~  218 (829)
T KOG2280|consen  142 VLTV--SGQVILINGVEEPK-LRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPNSS  218 (829)
T ss_pred             EEec--CCcEEEEcCCCcch-hhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCCce
Confidence            3332  3333222 211100 0000           0100    000000                     111112245


Q ss_pred             eEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee
Q psy10662        133 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~  169 (221)
                      +..+..||+.++|+--...|.|.+-+.+..+....++
T Consensus       219 ~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~  255 (829)
T KOG2280|consen  219 VVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN  255 (829)
T ss_pred             EEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence            6678889999999999999999998877666555443

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.10  E-value=0.098  Score=41.62  Aligned_cols=210  Identities=13%  Similarity=0.043  Sum_probs=114.5

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEecc-CceEE----------EEEecCCcEEEecCCCcEEEEEcCCCccceee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-KAVSY----------VKFLNKEDIVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~i~~----------~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      +..+.+++.++.|+-+|.. +++.+..+.... ..+..          +++. ++.++.++.|+.+.-.|.++++.+-..
T Consensus        69 ~g~vyv~s~~g~v~AlDa~-TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~-~~~v~v~t~dg~l~ALDa~TGk~~W~~  146 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAK-TGKELWKYDPKLPDDVIPVMCCDVVNRGVALY-DGKVFFGTLDARLVALDAKTGKVVWSK  146 (527)
T ss_pred             CCEEEEECCCCcEEEEECC-CCceeeEecCCCCcccccccccccccccceEE-CCEEEEEcCCCEEEEEECCCCCEEeec
Confidence            3466677778888888987 677776654211 11111          1222 456788888999999999999887655


Q ss_pred             ec--ccc--ceeEEEEeCCCCEEEEec------CCCeEEEEECCCCeeeEEEEeecccceeE-------------e----
Q psy10662         72 VG--HIN--DKNFVGLATDGDYVACGS------ENNSLYIYYKGLSKHMHAYRFDTVRSMLE-------------S----  124 (221)
Q Consensus        72 ~~--~~~--~v~~~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-------------~----  124 (221)
                      ..  +..  .+.+--.-.++ .++.+.      .+|.|..+|.++++.+..+..........             .    
T Consensus       147 ~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~  225 (527)
T TIGR03075       147 KNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPG  225 (527)
T ss_pred             ccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCC
Confidence            32  110  11111001133 444443      26899999999999987764332211100             0    


Q ss_pred             -eEEEeeCceE-EEEEecCCCEEEEecCC-----C-----------eEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662        125 -SFVGHINDKN-FVGLATDGDYVACGSEN-----N-----------SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT  186 (221)
Q Consensus       125 -~~~~~~~~v~-~~~~~~~~~~l~~~~~d-----~-----------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (221)
                       ........+. .++++|...++..+..+     +           .|.-.|+++++..-.++......     -.+...
T Consensus       226 ~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~-----wD~d~~  300 (527)
T TIGR03075       226 DAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDE-----WDYDGV  300 (527)
T ss_pred             CccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCC-----ccccCC
Confidence             0000011121 34667766666555522     1           45555667776654443211100     001111


Q ss_pred             ccceeEEEEcCCCc---EEEEecCCCeEEEEECCcccC
Q psy10662        187 NEFVSAVCWRQLSR---VLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       187 ~~~v~~~~~~~~~~---~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      ..+ .-+....+|+   .++.++.+|.+.+.|-.+|++
T Consensus       301 ~~p-~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~  337 (527)
T TIGR03075       301 NEM-ILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL  337 (527)
T ss_pred             CCc-EEEEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence            111 1223334665   788899999999999998863

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.09  E-value=0.079  Score=40.34  Aligned_cols=205  Identities=12%  Similarity=0.061  Sum_probs=87.1

Q ss_pred             CceEEEEe-CCCeEEEEEecCC---ceeeEEEEe---cc-C---ceEEEEEecCC-cEEEe--cC----CCcEEEEEcCC
Q psy10662          3 SCHLAFGS-ADHCVHYYDLRNT---KEALAVFKG---HR-K---AVSYVKFLNKE-DIVSA--ST----DSQLKLWNINK   64 (221)
Q Consensus         3 ~~~l~~~~-~dg~i~i~~~~~~---~~~~~~~~~---~~-~---~i~~~~~~~~~-~l~s~--~~----d~~v~~wd~~~   64 (221)
                      .++|+..+ ..+.|+|+|+.+.   -+..++++.   +. .   ....+..-|++ .++++  ..    -|-+.+.|-++
T Consensus        87 Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~t  166 (461)
T PF05694_consen   87 RRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGET  166 (461)
T ss_dssp             S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT
T ss_pred             CCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCcc
Confidence            34555555 6789999998732   234444442   11 1   11222222544 56654  22    24577777766


Q ss_pred             Cccceeeecc---ccceeEEEEeCCCCEEEEecC--------------------CCeEEEEECCCCeeeEEEEeecccce
Q psy10662         65 PNCLRSFVGH---INDKNFVGLATDGDYVACGSE--------------------NNSLYIYYKGLSKHMHAYRFDTVRSM  121 (221)
Q Consensus        65 ~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~--------------------d~~v~iwd~~~~~~~~~~~~~~~~~~  121 (221)
                      .+........   ..--+.+-+.|..+.++|...                    ...+++||+.+.+.++++......  
T Consensus       167 f~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g--  244 (461)
T PF05694_consen  167 FEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEG--  244 (461)
T ss_dssp             --EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTE--
T ss_pred             ccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCC--
Confidence            5555444321   223456777887777776532                    357999999999999887432211  


Q ss_pred             eEeeEEEeeCceEEEEEe--cCCCEEEE-ecCCCeEEEEEc-CCCCce--eeeeeecc---cccc-ccccccccccccee
Q psy10662        122 LESSFVGHINDKNFVGLA--TDGDYVAC-GSENNSLYIYYK-GLSKHM--HAYRFDTV---RSML-ERDRNEDDTNEFVS  191 (221)
Q Consensus       122 ~~~~~~~~~~~v~~~~~~--~~~~~l~~-~~~d~~i~~~d~-~~~~~~--~~~~~~~~---~~~~-~~~~~~~~~~~~v~  191 (221)
                               ..+..+.|.  |+..+=.+ +--...|..|-. ..++-.  ..+.....   ...+ ..+..+..-..-|+
T Consensus       245 ---------~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~Lit  315 (461)
T PF05694_consen  245 ---------QMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLIT  315 (461)
T ss_dssp             ---------EEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE-----
T ss_pred             ---------CceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceE
Confidence                     123344453  43333222 223344444433 322211  11111111   0101 11222233345689


Q ss_pred             EEEEcCCCcEEEEec-CCCeEEEEECCc
Q psy10662        192 AVCWRQLSRVLVAAN-SQGIIKIYVIPI  218 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~-~dg~i~iw~~~~  218 (221)
                      .+..|.|.++|+..+ .+|.|+.||+..
T Consensus       316 DI~iSlDDrfLYvs~W~~GdvrqYDISD  343 (461)
T PF05694_consen  316 DILISLDDRFLYVSNWLHGDVRQYDISD  343 (461)
T ss_dssp             -EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred             eEEEccCCCEEEEEcccCCcEEEEecCC
Confidence            999999999998877 599999999964

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.05  E-value=0.073  Score=39.23  Aligned_cols=159  Identities=9%  Similarity=0.080  Sum_probs=87.7

Q ss_pred             CCcEEEecCCCcEEEEEcC-CCccceee----eccccce-eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecc
Q psy10662         45 KEDIVSASTDSQLKLWNIN-KPNCLRSF----VGHINDK-NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV  118 (221)
Q Consensus        45 ~~~l~s~~~d~~v~~wd~~-~~~~~~~~----~~~~~~v-~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  118 (221)
                      +..+.+-|.||.+.-..+. .|+.....    .....++ ..-++...+..++-.+.+|.|+--|+........-.|...
T Consensus       147 ~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~  226 (342)
T PF06433_consen  147 NRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLL  226 (342)
T ss_dssp             TTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS
T ss_pred             CCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCccccc
Confidence            4558888999999998887 44443221    1112222 2223344444444467889898888876654433333322


Q ss_pred             ccee-EeeEEEeeCceEEEEEecCCCEEEEec--------CCC--eEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662        119 RSML-ESSFVGHINDKNFVGLATDGDYVACGS--------ENN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN  187 (221)
Q Consensus       119 ~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (221)
                      .... ...+  ..+.-.-+++++..+.|.+--        .|+  .|-++|+.+++.+..+..                .
T Consensus       227 t~~e~~~~W--rPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l----------------~  288 (342)
T PF06433_consen  227 TDAEKADGW--RPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL----------------E  288 (342)
T ss_dssp             -HHHHHTTE--EE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE----------------E
T ss_pred             CccccccCc--CCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC----------------C
Confidence            1100 0011  122223466666444443321        122  466778888887776653                2


Q ss_pred             cceeEEEEcCCCc-EEEEe-cCCCeEEEEECCcccC
Q psy10662        188 EFVSAVCWRQLSR-VLVAA-NSQGIIKIYVIPIRVL  221 (221)
Q Consensus       188 ~~v~~~~~~~~~~-~l~~~-~~dg~i~iw~~~~~~l  221 (221)
                      .++.++..+.+.+ +|++. ..++.+.+||..+|++
T Consensus       289 ~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~  324 (342)
T PF06433_consen  289 HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKL  324 (342)
T ss_dssp             EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--E
T ss_pred             CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcE
Confidence            3577899988765 66554 4689999999999874

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.04  E-value=0.074  Score=39.18  Aligned_cols=152  Identities=6%  Similarity=0.040  Sum_probs=89.4

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEe----ccCceE-EEEEe-cCCcEEEecCCCcEEEEEcCCCccce--eeec--
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKG----HRKAVS-YVKFL-NKEDIVSASTDSQLKLWNINKPNCLR--SFVG--   73 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~----~~~~i~-~~~~~-~~~~l~s~~~d~~v~~wd~~~~~~~~--~~~~--   73 (221)
                      +.+.+-+.||.+.-..+...++.......    -.+++. .-++. .++.++-.+.+|.|+--|+.......  ....  
T Consensus       148 ~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t  227 (342)
T PF06433_consen  148 RGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLT  227 (342)
T ss_dssp             TEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-
T ss_pred             CceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccC
Confidence            34677789999999999866665433211    112221 22333 24556667889999998886553211  1110  


Q ss_pred             --------cccceeEEEEeCCCCEEEEecC--------CC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662         74 --------HINDKNFVGLATDGDYVACGSE--------NN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF  135 (221)
Q Consensus        74 --------~~~~v~~~~~~~~~~~l~~~~~--------d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  135 (221)
                              -.+.-.-+++++..+.|.....        |+  .|.++|+.+++.+..+             . -..++.+
T Consensus       228 ~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri-------------~-l~~~~~S  293 (342)
T PF06433_consen  228 DAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARI-------------P-LEHPIDS  293 (342)
T ss_dssp             HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEE-------------E-EEEEESE
T ss_pred             ccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEE-------------e-CCCccce
Confidence                    1233456778776655444321        21  4777788888887765             2 1234678


Q ss_pred             EEEecCCC-EEEE-ecCCCeEEEEEcCCCCceeeee
Q psy10662        136 VGLATDGD-YVAC-GSENNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       136 ~~~~~~~~-~l~~-~~~d~~i~~~d~~~~~~~~~~~  169 (221)
                      ++.+.+.+ +|++ ...++.+.+||..+++.+..++
T Consensus       294 i~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~  329 (342)
T PF06433_consen  294 IAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE  329 (342)
T ss_dssp             EEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred             EEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence            88988766 4543 4568999999999998876664

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG4441|consensus

Probab=96.93  E-value=0.15  Score=40.95  Aligned_cols=187  Identities=13%  Similarity=0.120  Sum_probs=90.7

Q ss_pred             CCceEEEEeCC------CeEEEEEecCCc-eeeEEEEeccCceEEEEEecCCcEEEecCCCc-----EEEEEcCCCccc-
Q psy10662          2 NSCHLAFGSAD------HCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQ-----LKLWNINKPNCL-   68 (221)
Q Consensus         2 ~~~~l~~~~~d------g~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~-----v~~wd~~~~~~~-   68 (221)
                      ++.+.++|+.|      ..+..||..... ..+..+...+. -.+++...+...+.|+.||.     +-.||..+.+.- 
T Consensus       332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~-~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~  410 (571)
T KOG4441|consen  332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRS-DFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTP  410 (571)
T ss_pred             CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccc-cceeEEECCEEEEEeccccccccccEEEecCCCCcccc
Confidence            45678889888      356777776222 11111221111 12233334566788888864     667777664332 


Q ss_pred             -eeeeccccceeEEEEeCCCCEEEEecCCC------eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662         69 -RSFVGHINDKNFVGLATDGDYVACGSENN------SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD  141 (221)
Q Consensus        69 -~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  141 (221)
                       ............+.  -+|...++||.++      .+..||..+.+....-           .+........ ++ .-+
T Consensus       411 va~m~~~r~~~gv~~--~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~-----------~M~~~R~~~g-~a-~~~  475 (571)
T KOG4441|consen  411 VAPMLTRRSGHGVAV--LGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIA-----------PMNTRRSGFG-VA-VLN  475 (571)
T ss_pred             cCCCCcceeeeEEEE--ECCEEEEEcCcCCCccccceEEEEcCCCCceeecC-----------Ccccccccce-EE-EEC
Confidence             11111111122222  2577778887554      4677777766543211           1111111111 22 235


Q ss_pred             CCEEEEecCCCe-----EEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC-----eE
Q psy10662        142 GDYVACGSENNS-----LYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG-----II  211 (221)
Q Consensus       142 ~~~l~~~~~d~~-----i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i  211 (221)
                      +.+.+.||.|+.     |..||..+.+.             ............+..+.+  +++..+.|+.||     +|
T Consensus       476 ~~iYvvGG~~~~~~~~~VE~ydp~~~~W-------------~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~~~l~~v  540 (571)
T KOG4441|consen  476 GKIYVVGGFDGTSALSSVERYDPETNQW-------------TMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGNNNLNTV  540 (571)
T ss_pred             CEEEEECCccCCCccceEEEEcCCCCce-------------eEcccCccccccccEEEE--CCEEEEEecccCcccccee
Confidence            678888887762     44555544332             222111122222222222  566777777765     46


Q ss_pred             EEEECCcc
Q psy10662        212 KIYVIPIR  219 (221)
Q Consensus       212 ~iw~~~~~  219 (221)
                      ..||..+.
T Consensus       541 e~ydp~~d  548 (571)
T KOG4441|consen  541 ECYDPETD  548 (571)
T ss_pred             EEcCCCCC
Confidence            66665544

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.89  E-value=0.099  Score=38.24  Aligned_cols=157  Identities=10%  Similarity=0.120  Sum_probs=73.9

Q ss_pred             ccCceEEEEEecCCcEEEecCCCcE-EEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEEC-CCCeee
Q psy10662         33 HRKAVSYVKFLNKEDIVSASTDSQL-KLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK-GLSKHM  110 (221)
Q Consensus        33 ~~~~i~~~~~~~~~~l~s~~~d~~v-~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~-~~~~~~  110 (221)
                      -.+.+..+.-++++.+++.+..|.+ .-||--...-...-..-...|..+.|.|++.+.+.+ ..|.|+.=+. ...+. 
T Consensus       143 ~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~-  220 (302)
T PF14870_consen  143 TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGET-  220 (302)
T ss_dssp             ----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEE-
T ss_pred             CcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccc-
Confidence            3456778777777776666666665 466643222222222345689999999998765544 7888887661 11111 


Q ss_pred             EEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662        111 HAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV  190 (221)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  190 (221)
                        +  ..    ...........+..++|.+++...++|+.. .+. ...+.++            .+++......-...+
T Consensus       221 --w--~~----~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G-~l~-~S~DgGk------------tW~~~~~~~~~~~n~  278 (302)
T PF14870_consen  221 --W--SE----PIIPIKTNGYGILDLAYRPPNEIWAVGGSG-TLL-VSTDGGK------------TWQKDRVGENVPSNL  278 (302)
T ss_dssp             --E---------B-TTSS--S-EEEEEESSSS-EEEEESTT--EE-EESSTTS------------S-EE-GGGTTSSS--
T ss_pred             --c--cc----ccCCcccCceeeEEEEecCCCCEEEEeCCc-cEE-EeCCCCc------------cceECccccCCCCce
Confidence              1  00    000001122346788999888777766654 332 2222222            222222222334457


Q ss_pred             eEEEEcCCCcEEEEecCCCeEEEE
Q psy10662        191 SAVCWRQLSRVLVAANSQGIIKIY  214 (221)
Q Consensus       191 ~~~~~~~~~~~l~~~~~dg~i~iw  214 (221)
                      +.+.|.+..+-++.| .+|.|.-|
T Consensus       279 ~~i~f~~~~~gf~lG-~~G~ll~~  301 (302)
T PF14870_consen  279 YRIVFVNPDKGFVLG-QDGVLLRY  301 (302)
T ss_dssp             -EEEEEETTEEEEE--STTEEEEE
T ss_pred             EEEEEcCCCceEEEC-CCcEEEEe
Confidence            888887765656655 68887665

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=96.86  E-value=0.13  Score=39.17  Aligned_cols=205  Identities=10%  Similarity=-0.015  Sum_probs=82.9

Q ss_pred             CCCceEEEEeC------CCeEEEEEecCCceeeEEEEeccC---ceEEEEEecC-CcEEEec------------------
Q psy10662          1 MNSCHLAFGSA------DHCVHYYDLRNTKEALAVFKGHRK---AVSYVKFLNK-EDIVSAS------------------   52 (221)
Q Consensus         1 ~~~~~l~~~~~------dg~i~i~~~~~~~~~~~~~~~~~~---~i~~~~~~~~-~~l~s~~------------------   52 (221)
                      |+|+.++++-.      -|-+.++|-+ +.+.........+   .-..+.|.|. +.++|..                  
T Consensus       139 p~G~imIS~lGd~~G~g~Ggf~llD~~-tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~  217 (461)
T PF05694_consen  139 PDGRIMISALGDADGNGPGGFVLLDGE-TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEA  217 (461)
T ss_dssp             SS--EEEEEEEETTS-S--EEEEE-TT-T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHH
T ss_pred             CCccEEEEeccCCCCCCCCcEEEEcCc-cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhc
Confidence            45666666432      2456666655 4555555543222   2345555553 3344432                  


Q ss_pred             --CCCcEEEEEcCCCccceeeeccc--cceeEEEEe--CCCCE-EEEecCCCeEEEE-ECCCCeeeEEEEeecccc----
Q psy10662         53 --TDSQLKLWNINKPNCLRSFVGHI--NDKNFVGLA--TDGDY-VACGSENNSLYIY-YKGLSKHMHAYRFDTVRS----  120 (221)
Q Consensus        53 --~d~~v~~wd~~~~~~~~~~~~~~--~~v~~~~~~--~~~~~-l~~~~~d~~v~iw-d~~~~~~~~~~~~~~~~~----  120 (221)
                        ...++.+||+.+.+.++++.-..  .....+.|.  |+..+ ++.+.-...|..| ....++....--.+....    
T Consensus       218 ~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~  297 (461)
T PF05694_consen  218 GKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEG  297 (461)
T ss_dssp             H-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--S
T ss_pred             ccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCc
Confidence              24679999999999998885332  235567775  44444 3333334445444 323333222111111000    


Q ss_pred             ----eeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeee-eeccccccc---cccccccccccee
Q psy10662        121 ----MLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYR-FDTVRSMLE---RDRNEDDTNEFVS  191 (221)
Q Consensus       121 ----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~v~  191 (221)
                          ..++.+..-..-++.|..|.|.++|..++ .+|.|+.||+.......... ....+....   +...-..-.+...
T Consensus       298 ~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPq  377 (461)
T PF05694_consen  298 WILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQ  377 (461)
T ss_dssp             S---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S---
T ss_pred             ccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCC
Confidence                00111222245678899999999987766 58999999998754332221 111010000   0000001122345


Q ss_pred             EEEEcCCCcEEEEec
Q psy10662        192 AVCWRQLSRVLVAAN  206 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~  206 (221)
                      -+..|.||+.|+..+
T Consensus       378 MvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  378 MVQLSLDGKRLYVTN  392 (461)
T ss_dssp             -EEE-TTSSEEEEE-
T ss_pred             eEEEccCCeEEEEEe
Confidence            678888998887654

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=96.81  E-value=0.23  Score=41.32  Aligned_cols=162  Identities=10%  Similarity=0.100  Sum_probs=90.2

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceE-------------EEEEec---CCcEEEecC----------CCc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVS-------------YVKFLN---KEDIVSAST----------DSQ   56 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~-------------~~~~~~---~~~l~s~~~----------d~~   56 (221)
                      +.+++.++.|+.|.-.|.+ +++.+..+.. .+.|.             .+.-.|   ++.++.++.          +|.
T Consensus       260 ~~rV~~~T~Dg~LiALDA~-TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~  337 (764)
T TIGR03074       260 ARRIILPTSDARLIALDAD-TGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGV  337 (764)
T ss_pred             CCEEEEecCCCeEEEEECC-CCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcE
Confidence            3477788889999999987 6777765532 22110             111123   566666643          688


Q ss_pred             EEEEEcCCCccceeeecc---------cc--------ce-eEEEEeCCCCEEEEecC------------------CCeEE
Q psy10662         57 LKLWNINKPNCLRSFVGH---------IN--------DK-NFVGLATDGDYVACGSE------------------NNSLY  100 (221)
Q Consensus        57 v~~wd~~~~~~~~~~~~~---------~~--------~v-~~~~~~~~~~~l~~~~~------------------d~~v~  100 (221)
                      |+-+|.++++.+-.+..-         .+        .+ ...++.|+..+++.+..                  .+.|.
T Consensus       338 I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slv  417 (764)
T TIGR03074       338 IRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLV  417 (764)
T ss_pred             EEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEE
Confidence            999999999887655310         00        01 22344444444333211                  23455


Q ss_pred             EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCC---EEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGD---YVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      -.|.++++....++.-....-   .+.. .....-+.+.. +|+   .++.++.+|.++++|.++++.+...++
T Consensus       418 ALD~~TGk~~W~~Q~~~hD~W---D~D~-~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~e  487 (764)
T TIGR03074       418 ALDATTGKERWVFQTVHHDLW---DMDV-PAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVEE  487 (764)
T ss_pred             EEeCCCCceEEEecccCCccc---cccc-cCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeecee
Confidence            566777766655431000000   0000 11112223322 553   789999999999999999998876554

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PHA02713 hypothetical protein; Provisional

Probab=96.78  E-value=0.031  Score=44.76  Aligned_cols=23  Identities=4%  Similarity=-0.135  Sum_probs=16.0

Q ss_pred             CCCEEEEecCCC--eEEEEEcCCCC
Q psy10662        141 DGDYVACGSENN--SLYIYYKGLSK  163 (221)
Q Consensus       141 ~~~~l~~~~~d~--~i~~~d~~~~~  163 (221)
                      ++++.++|+.++  .+..||..+.+
T Consensus       512 ~~~iyv~Gg~~~~~~~e~yd~~~~~  536 (557)
T PHA02713        512 DNTIMMLHCYESYMLQDTFNVYTYE  536 (557)
T ss_pred             CCEEEEEeeecceeehhhcCccccc
Confidence            678888999888  55566655443

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.73  E-value=0.17  Score=39.95  Aligned_cols=155  Identities=8%  Similarity=0.033  Sum_probs=86.6

Q ss_pred             CceEEEEEecCCcEEEec---CCCcEEEEEcCCCccceeeeccccceeEEEEeCCC----CEEEEecCCCeEEEEECCC-
Q psy10662         35 KAVSYVKFLNKEDIVSAS---TDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG----DYVACGSENNSLYIYYKGL-  106 (221)
Q Consensus        35 ~~i~~~~~~~~~~l~s~~---~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~v~iwd~~~-  106 (221)
                      .++..++|-+++.++-..   .+|.+++=|   .+.+..    -..|..+.|.|-+    .-+.+......|.||.+.. 
T Consensus        20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGd---s~viGq----FEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s   92 (671)
T PF15390_consen   20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGD---SKVIGQ----FEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPS   92 (671)
T ss_pred             ccccceEecCCCEEEEEeeeeeCCccccCC---ccEeec----cceeeeeeecCcccCCCCceEEEeccceEEEEEeccC
Confidence            478899999877644322   234333322   122323    3358899998853    2455666777899998742 


Q ss_pred             ----CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccc
Q psy10662        107 ----SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRN  182 (221)
Q Consensus       107 ----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  182 (221)
                          ++.+..-..+.     .   ....--...+.|+|....|++-.....-.+++.+.....-..+.            
T Consensus        93 ~~e~~K~l~sQtcEi-----~---e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi------------  152 (671)
T PF15390_consen   93 TTERNKLLMSQTCEI-----R---EPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI------------  152 (671)
T ss_pred             ccccccceeeeeeec-----c---CCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEec------------
Confidence                22211110000     0   00011123578999988887766655555666554433222211            


Q ss_pred             ccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCc
Q psy10662        183 EDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPI  218 (221)
Q Consensus       183 ~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~  218 (221)
                        ...+.|.+.||.+||+.|+.+- ..=.-++||-..
T Consensus       153 --~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  153 --KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             --cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence              2345799999999998876653 333456777543

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.73  E-value=0.14  Score=37.51  Aligned_cols=112  Identities=13%  Similarity=0.092  Sum_probs=58.4

Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      ...+.+..+.-+++|.++++++.-....-||........             .-......+..+.|.|++.+.+++ ..|
T Consensus       142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~-------------~~r~~~~riq~~gf~~~~~lw~~~-~Gg  207 (302)
T PF14870_consen  142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQP-------------HNRNSSRRIQSMGFSPDGNLWMLA-RGG  207 (302)
T ss_dssp             S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EE-------------EE--SSS-EEEEEE-TTS-EEEEE-TTT
T ss_pred             CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceE-------------EccCccceehhceecCCCCEEEEe-CCc
Confidence            345678888889999999988777777788754321111             112335678999999998876644 888


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      .|++=+...  ....+.  .      .........-.+..++|.+++...++|+..
T Consensus       208 ~~~~s~~~~--~~~~w~--~------~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G  253 (302)
T PF14870_consen  208 QIQFSDDPD--DGETWS--E------PIIPIKTNGYGILDLAYRPPNEIWAVGGSG  253 (302)
T ss_dssp             EEEEEE-TT--EEEEE-----------B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred             EEEEccCCC--Cccccc--c------ccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence            888766111  111111  0      111111223357899999988877776543

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.72  E-value=0.13  Score=42.36  Aligned_cols=85  Identities=13%  Similarity=0.146  Sum_probs=52.5

Q ss_pred             ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCcee-------eeeeecccccccccccccccccceeEEEEcCC---CcE
Q psy10662        132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH-------AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL---SRV  201 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~  201 (221)
                      .|..+.++|+|++++..|..|...+.=-+......       .+....  ...........+...|..+.|+|.   +..
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt--~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRT--VPVDERFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEE--EEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence            57889999999999999887755443221110000       000000  000000011234567999999996   588


Q ss_pred             EEEecCCCeEEEEECCc
Q psy10662        202 LVAANSQGIIKIYVIPI  218 (221)
Q Consensus       202 l~~~~~dg~i~iw~~~~  218 (221)
                      |+.-+.|+.+|+||+..
T Consensus       164 l~vLtsdn~lR~y~~~~  180 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDISD  180 (717)
T ss_pred             EEEEecCCEEEEEecCC
Confidence            99999999999999964

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.71  E-value=0.13  Score=36.90  Aligned_cols=160  Identities=10%  Similarity=0.045  Sum_probs=88.6

Q ss_pred             CCCceEEEEeC-----CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCC-------------------Cc
Q psy10662          1 MNSCHLAFGSA-----DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTD-------------------SQ   56 (221)
Q Consensus         1 ~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d-------------------~~   56 (221)
                      |||.+|...-.     .|.|-|||.....+.+..+..|.-....+.+.+++.++.....                   .+
T Consensus       123 ~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePS  202 (366)
T COG3490         123 PDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPS  202 (366)
T ss_pred             CCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCcc
Confidence            56777765433     3789999998666778888888877888889887665443322                   12


Q ss_pred             EEEEEcCCCccceee--e--ccccceeEEEEeCCCCEEEEecCCCe-----EEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         57 LKLWNINKPNCLRSF--V--GHINDKNFVGLATDGDYVACGSENNS-----LYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        57 v~~wd~~~~~~~~~~--~--~~~~~v~~~~~~~~~~~l~~~~~d~~-----v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                      +.+.|-.+++.+...  .  .+.-.|..++..++|..++.+-..|.     -.+=-...++++.-+....      .+..
T Consensus       203 lvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pe------e~~~  276 (366)
T COG3490         203 LVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPE------EQTA  276 (366)
T ss_pred             EEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCH------HHHH
Confidence            333343344433221  1  23345777777777766555433221     1111112233322221100      0111


Q ss_pred             EeeCceEEEEEecCCCEE-EEecCCCeEEEEEcCCCCcee
Q psy10662        128 GHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMH  166 (221)
Q Consensus       128 ~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~  166 (221)
                      ...+.+-+++.+.+..++ +++-..+...+||..++....
T Consensus       277 ~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~  316 (366)
T COG3490         277 AFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVS  316 (366)
T ss_pred             HHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEe
Confidence            233456677877544444 555566678899999887653

>PHA02790 Kelch-like protein; Provisional

Probab=96.69  E-value=0.21  Score=39.31  Aligned_cols=104  Identities=7%  Similarity=0.012  Sum_probs=48.1

Q ss_pred             CceEEEEeCCC-----eEEEEEecCCc-eeeEEEEeccCceEEEEEecCCcEEEecCC--CcEEEEEcCCCccc--eeee
Q psy10662          3 SCHLAFGSADH-----CVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNKEDIVSASTD--SQLKLWNINKPNCL--RSFV   72 (221)
Q Consensus         3 ~~~l~~~~~dg-----~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d--~~v~~wd~~~~~~~--~~~~   72 (221)
                      +.++++|+.++     .+..||..... ..+..+...... .+++...+..++.|+.+  ..+..||..+.+..  ..+.
T Consensus       272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~-~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~  350 (480)
T PHA02790        272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLY-ASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLL  350 (480)
T ss_pred             CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhc-ceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCCCC
Confidence            44567776543     46667766221 111112111111 22222344556677653  35778887654322  1221


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCC---eEEEEECCCCee
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENN---SLYIYYKGLSKH  109 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~  109 (221)
                      ........+  .-+++..+.||.++   .+..||.++.+.
T Consensus       351 ~~r~~~~~~--~~~g~IYviGG~~~~~~~ve~ydp~~~~W  388 (480)
T PHA02790        351 KPRCNPAVA--SINNVIYVIGGHSETDTTTEYLLPNHDQW  388 (480)
T ss_pred             CCCcccEEE--EECCEEEEecCcCCCCccEEEEeCCCCEE
Confidence            111111122  22567777777543   466777765543

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=96.68  E-value=0.29  Score=40.73  Aligned_cols=110  Identities=14%  Similarity=0.154  Sum_probs=69.4

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCc--------eEEEEEec-----------------CCcEEEecCCCcE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKA--------VSYVKFLN-----------------KEDIVSASTDSQL   57 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~--------i~~~~~~~-----------------~~~l~s~~~d~~v   57 (221)
                      +..|..++.++.|.-.|.. +++.+..+......        ...+.+..                 +++++.++.|+.+
T Consensus       194 gg~lYv~t~~~~V~ALDa~-TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L  272 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAA-TGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL  272 (764)
T ss_pred             CCEEEEECCCCeEEEEECC-CCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence            4566777788888888987 67777666432210        12233321                 2468888899999


Q ss_pred             EEEEcCCCccceeeecccccee-------------EEEEeC--CCCEEEEecC----------CCeEEEEECCCCeeeEE
Q psy10662         58 KLWNINKPNCLRSFVGHINDKN-------------FVGLAT--DGDYVACGSE----------NNSLYIYYKGLSKHMHA  112 (221)
Q Consensus        58 ~~wd~~~~~~~~~~~~~~~~v~-------------~~~~~~--~~~~l~~~~~----------d~~v~iwd~~~~~~~~~  112 (221)
                      .-.|.++++....+. ..+.+.             .+.-.|  .+..++.|+.          +|.|+-+|.++++.+..
T Consensus       273 iALDA~TGk~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~  351 (764)
T TIGR03074       273 IALDADTGKLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA  351 (764)
T ss_pred             EEEECCCCCEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence            999999998886653 111110             011111  1345555532          68899999999999887


Q ss_pred             EE
Q psy10662        113 YR  114 (221)
Q Consensus       113 ~~  114 (221)
                      +.
T Consensus       352 ~~  353 (764)
T TIGR03074       352 WD  353 (764)
T ss_pred             Ee
Confidence            64

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=96.56  E-value=0.02  Score=28.10  Aligned_cols=31  Identities=10%  Similarity=0.085  Sum_probs=25.9

Q ss_pred             cceeEEEEeCCC---CEEEEecCCCeEEEEECCC
Q psy10662         76 NDKNFVGLATDG---DYVACGSENNSLYIYYKGL  106 (221)
Q Consensus        76 ~~v~~~~~~~~~---~~l~~~~~d~~v~iwd~~~  106 (221)
                      +.+.++.|+|+.   ++|+.+-..+.|.|+|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            358899999754   4888888889999999985

It contains a characteristic DLL sequence motif.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.54  E-value=0.18  Score=36.34  Aligned_cols=128  Identities=10%  Similarity=0.195  Sum_probs=84.7

Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      +....+.++.|+|+.+.|++......-.++=...|+.++++.           +.+ -...-.+++..++++.++--.++
T Consensus        83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiP-----------L~g-~~DpE~Ieyig~n~fvi~dER~~  150 (316)
T COG3204          83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIP-----------LTG-FSDPETIEYIGGNQFVIVDERDR  150 (316)
T ss_pred             cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEec-----------ccc-cCChhHeEEecCCEEEEEehhcc
Confidence            444559999999999999888888777777667777777652           122 22344577778888888877888


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      .+.++.+.........+     ....++......+...-.++|+|....|..+-+-.=+.||.+.
T Consensus       151 ~l~~~~vd~~t~~~~~~-----~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~  210 (316)
T COG3204         151 ALYLFTVDADTTVISAK-----VQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT  210 (316)
T ss_pred             eEEEEEEcCCccEEecc-----ceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence            99988876654332221     0011111111225567789999988888887766666776654

>KOG3630|consensus

Probab=96.51  E-value=0.082  Score=44.78  Aligned_cols=133  Identities=17%  Similarity=0.050  Sum_probs=78.8

Q ss_pred             EEEecCCCcEEEEEcCCCccce-----eee------ccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEe
Q psy10662         48 IVSASTDSQLKLWNINKPNCLR-----SFV------GHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRF  115 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~-----~~~------~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~  115 (221)
                      ++..+.+-.|..||+++-..-.     -+.      .......++.|+|.-. ..+....|+.|++..+........   
T Consensus       117 v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~---  193 (1405)
T KOG3630|consen  117 VVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVT---  193 (1405)
T ss_pred             EEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhc---
Confidence            4444555678999997532211     111      1123456778887654 356667788888876543222110   


Q ss_pred             ecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE
Q psy10662        116 DTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW  195 (221)
Q Consensus       116 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  195 (221)
                               . .......++++|+|.|+.+++|-..|++.-|...-.. ...+         .+....  ....|.+++|
T Consensus       194 ---------s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~lei-k~~i---------p~Pp~~--e~yrvl~v~W  251 (1405)
T KOG3630|consen  194 ---------S-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEI-KSEI---------PEPPVE--ENYRVLSVTW  251 (1405)
T ss_pred             ---------c-cCcccceeeEEeccccceeeEecCCCeEEEeecccce-eecc---------cCCCcC--CCcceeEEEE
Confidence                     0 1234568899999999999999999999888532211 0000         001111  1467899999


Q ss_pred             cCCCcEEEEe
Q psy10662        196 RQLSRVLVAA  205 (221)
Q Consensus       196 ~~~~~~l~~~  205 (221)
                      -....+|+.-
T Consensus       252 l~t~eflvvy  261 (1405)
T KOG3630|consen  252 LSTQEFLVVY  261 (1405)
T ss_pred             ecceeEEEEe
Confidence            8877777654

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=96.48  E-value=0.15  Score=34.83  Aligned_cols=188  Identities=10%  Similarity=0.013  Sum_probs=95.6

Q ss_pred             CCceEEEEeCC--CeEEEEEecCCceeeEEEEeccCceEE--EEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          2 NSCHLAFGSAD--HCVHYYDLRNTKEALAVFKGHRKAVSY--VKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         2 ~~~~l~~~~~d--g~i~i~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      +|.++.+.+.-  ..|++||+. +++.+..-.-....+..  +.-..+....-.-.+|.-..+|.++.+++..+. ..+.
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~-~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y~Ge  132 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLT-TGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-YEGE  132 (262)
T ss_pred             CCEEEEeccccccceeEEEecc-CceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-cCCc
Confidence            34555555543  369999998 56655443321111111  110112334455678888999998888876653 3444


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      -+.++-  +++.++.+....++..-|.++-....+++... .+.++.       .++.+.|- +|...|-.=.+..|...
T Consensus       133 GWgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v~VT~-~g~pv~-------~LNELE~V-dG~lyANVw~t~~I~rI  201 (262)
T COG3823         133 GWGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTVQVTD-DGVPVS-------KLNELEWV-DGELYANVWQTTRIARI  201 (262)
T ss_pred             ceeeec--CCcceEeeCCceEEEecCHHHhhhcceEEEEE-CCeecc-------cccceeee-ccEEEEeeeeecceEEE
Confidence            455443  56667777767778777776655444432110 111111       11222222 33333322233344444


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC-cEEEEe
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVAA  205 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~  205 (221)
                      +..+++...-++.+.......   ....+..-.+.+++.|++ +++++|
T Consensus       202 ~p~sGrV~~widlS~L~~~~~---~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         202 DPDSGRVVAWIDLSGLLKELN---LDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             cCCCCcEEEEEEccCCchhcC---ccccccccccceeecCcCCeEEEec
Confidence            555555554444333222221   222345567899999987 555665

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.45  E-value=0.2  Score=35.97  Aligned_cols=180  Identities=9%  Similarity=0.003  Sum_probs=96.1

Q ss_pred             CCeEEEEEecCCceeeEEEEeccCceEEEEEecC--CcEEEecCCCc-EEEEEcCCCccceeeeccccc--eeEEEEeCC
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQ-LKLWNINKPNCLRSFVGHIND--KNFVGLATD   86 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~-v~~wd~~~~~~~~~~~~~~~~--v~~~~~~~~   86 (221)
                      ||.-.+--+.+.++++.... -...-..|+|+|.  ..++.+-.-|+ ..++|....+....+...++.  --.-.|+|+
T Consensus        46 dgs~g~a~~~eaGk~v~~~~-lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~d  124 (366)
T COG3490          46 DGSFGAATLSEAGKIVFATA-LPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPD  124 (366)
T ss_pred             CCceeEEEEccCCceeeeee-cccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCC
Confidence            34433333333455554433 2334456777762  23445544444 568898887766655432221  123468999


Q ss_pred             CCEEEEecC-----CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE----
Q psy10662         87 GDYVACGSE-----NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY----  157 (221)
Q Consensus        87 ~~~l~~~~~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~----  157 (221)
                      |.+|...-.     -|.|-|||.+.+-            +.+..+..|.-....+.+.+||+.++.+..  -|..-    
T Consensus       125 G~~LYATEndfd~~rGViGvYd~r~~f------------qrvgE~~t~GiGpHev~lm~DGrtlvvanG--GIethpdfg  190 (366)
T COG3490         125 GRLLYATENDFDPNRGVIGVYDAREGF------------QRVGEFSTHGIGPHEVTLMADGRTLVVANG--GIETHPDFG  190 (366)
T ss_pred             CcEEEeecCCCCCCCceEEEEeccccc------------ceecccccCCcCcceeEEecCCcEEEEeCC--ceecccccC
Confidence            998876543     3689999987321            112234556666677899999998887643  23322    


Q ss_pred             ----EcCCCCceeeeeeeccccccccccccc--ccccceeEEEEcCCCcEEEEecC
Q psy10662        158 ----YKGLSKHMHAYRFDTVRSMLERDRNED--DTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       158 ----d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                          ++.+-++...+--...+..+++. .+.  .+...|..++..+||..++.+-.
T Consensus       191 R~~lNldsMePSlvlld~atG~liekh-~Lp~~l~~lSiRHld~g~dgtvwfgcQy  245 (366)
T COG3490         191 RTELNLDSMEPSLVLLDAATGNLIEKH-TLPASLRQLSIRHLDIGRDGTVWFGCQY  245 (366)
T ss_pred             ccccchhhcCccEEEEeccccchhhhc-cCchhhhhcceeeeeeCCCCcEEEEEEe
Confidence                22222222221111112222211 111  34556888888888887666543

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=96.45  E-value=0.018  Score=28.24  Aligned_cols=30  Identities=20%  Similarity=0.133  Sum_probs=25.4

Q ss_pred             ceeEEEEcCCC---cEEEEecCCCeEEEEECCc
Q psy10662        189 FVSAVCWRQLS---RVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       189 ~v~~~~~~~~~---~~l~~~~~dg~i~iw~~~~  218 (221)
                      .|+++.|+|..   .+|+.+-.-|.|.++|+++
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            57899999854   5888888899999999984

It contains a characteristic DLL sequence motif.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.43  E-value=0.2  Score=35.70  Aligned_cols=132  Identities=11%  Similarity=0.121  Sum_probs=78.5

Q ss_pred             eeEEEEecc--CceEEEEEecCCc-EEEecCCC--cEEEEEcCCCccceeeecccc-ceeEEEEeCCCCEEEEecCCCeE
Q psy10662         26 ALAVFKGHR--KAVSYVKFLNKED-IVSASTDS--QLKLWNINKPNCLRSFVGHIN-DKNFVGLATDGDYVACGSENNSL   99 (221)
Q Consensus        26 ~~~~~~~~~--~~i~~~~~~~~~~-l~s~~~d~--~v~~wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~v   99 (221)
                      .+.++. |.  .....+.|.+++. +-+.+.-|  .|+.+|+.+++......-... ---.++... ++...-.=.++..
T Consensus        35 vv~~yp-Hd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~  112 (264)
T PF05096_consen   35 VVETYP-HDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEGTG  112 (264)
T ss_dssp             EEEEEE---TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSSEE
T ss_pred             EEEECC-CCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCCeE
Confidence            344444 33  3467788855444 55777666  699999999987655432211 112333432 3344445578899


Q ss_pred             EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccc
Q psy10662        100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS  175 (221)
Q Consensus       100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~  175 (221)
                      .+||..+.+.+.++.+              ...-..++  .+++.|+.+.....++++|..+.+....+.....+.
T Consensus       113 f~yd~~tl~~~~~~~y--------------~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~  172 (264)
T PF05096_consen  113 FVYDPNTLKKIGTFPY--------------PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGR  172 (264)
T ss_dssp             EEEETTTTEEEEEEE---------------SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTE
T ss_pred             EEEccccceEEEEEec--------------CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCE
Confidence            9999999888877632              23444555  567777777778899999988877777666544333

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.41  E-value=0.28  Score=37.21  Aligned_cols=163  Identities=13%  Similarity=0.078  Sum_probs=75.1

Q ss_pred             CceEEEEEecCCcEEEecC------------CC-cEEEEEcCC--Ccc--ceeeeccccceeEEEEeCCCCEEEEecCCC
Q psy10662         35 KAVSYVKFLNKEDIVSAST------------DS-QLKLWNINK--PNC--LRSFVGHINDKNFVGLATDGDYVACGSENN   97 (221)
Q Consensus        35 ~~i~~~~~~~~~~l~s~~~------------d~-~v~~wd~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~   97 (221)
                      .....|+|.+++.|+++..            .+ .|.+++-.+  ++.  ...+.........+++.+++ +++ ++...
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~   91 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPD   91 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCe
Confidence            3467788888777666532            23 676665432  222  22333233346789998888 444 34443


Q ss_pred             eEEEEECCCCeeeEEEEeecccceeEeeEEE----eeCceEEEEEecCCCEEEEecCCCeEEEEEc-C--C---CCceee
Q psy10662         98 SLYIYYKGLSKHMHAYRFDTVRSMLESSFVG----HINDKNFVGLATDGDYVACGSENNSLYIYYK-G--L---SKHMHA  167 (221)
Q Consensus        98 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~-~--~---~~~~~~  167 (221)
                      ..++.|.......     +.........+..    +......++|.|+|.+.++-+..+.-..-.. .  .   ...-..
T Consensus        92 i~~~~d~~gdg~a-----d~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i  166 (367)
T TIGR02604        92 ILFLRDKDGDDKA-----DGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGL  166 (367)
T ss_pred             EEEEeCCCCCCCC-----CCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceE
Confidence            3334344321000     0000011111211    2344678999999987665553211000000 0  0   000112


Q ss_pred             eeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        168 YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      +.+++.....+.+.  .++ .....++|+|+|+++++-..
T Consensus       167 ~r~~pdg~~~e~~a--~G~-rnp~Gl~~d~~G~l~~tdn~  203 (367)
T TIGR02604       167 FRYNPDGGKLRVVA--HGF-QNPYGHSVDSWGDVFFCDND  203 (367)
T ss_pred             EEEecCCCeEEEEe--cCc-CCCccceECCCCCEEEEccC
Confidence            23333222222211  122 23468999999998776543

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG4499|consensus

Probab=96.32  E-value=0.21  Score=34.82  Aligned_cols=100  Identities=5%  Similarity=-0.030  Sum_probs=62.5

Q ss_pred             CceEEEEEecC--CcEEEecCCCcEEEEE--cCCCc-----cceeeec----cccceeEEEEeCCCCEEEEecCCCeEEE
Q psy10662         35 KAVSYVKFLNK--EDIVSASTDSQLKLWN--INKPN-----CLRSFVG----HINDKNFVGLATDGDYVACGSENNSLYI  101 (221)
Q Consensus        35 ~~i~~~~~~~~--~~l~s~~~d~~v~~wd--~~~~~-----~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~v~i  101 (221)
                      +--+.++|+.+  .+.++-+.+-+|.-||  ..++.     .+..++.    .....-.+++..+|++.++.-..++|..
T Consensus       158 ~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~  237 (310)
T KOG4499|consen  158 GISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQK  237 (310)
T ss_pred             cCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEE
Confidence            33467788743  3366778888888887  44442     2222221    0111234455667888888878888999


Q ss_pred             EECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe-cCCCEEEE
Q psy10662        102 YYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA-TDGDYVAC  147 (221)
Q Consensus       102 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~  147 (221)
                      .|..+++.+.++             .-....+++++|- |+-..+++
T Consensus       238 ~dp~tGK~L~ei-------------klPt~qitsccFgGkn~d~~yv  271 (310)
T KOG4499|consen  238 VDPTTGKILLEI-------------KLPTPQITSCCFGGKNLDILYV  271 (310)
T ss_pred             ECCCCCcEEEEE-------------EcCCCceEEEEecCCCccEEEE
Confidence            999999888776             3346778999995 33334443

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.22  E-value=0.27  Score=35.15  Aligned_cols=156  Identities=13%  Similarity=0.067  Sum_probs=83.6

Q ss_pred             ceEEEEEecCCc-EEEec-CCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEE-CCCCeeeEE
Q psy10662         36 AVSYVKFLNKED-IVSAS-TDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY-KGLSKHMHA  112 (221)
Q Consensus        36 ~i~~~~~~~~~~-l~s~~-~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd-~~~~~~~~~  112 (221)
                      .+.+.+.++++. ++... .++.-.+|-...+....... ....+..-.|++++...+....+...+++. ...++....
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~  103 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPV  103 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeE
Confidence            688888997554 44333 24444444444443333322 223677788999977766666566566653 222222110


Q ss_pred             EEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec---CCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662        113 YRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS---ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF  189 (221)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (221)
                      -          -........|..++++|||..++.-.   .++.|.+--+.....-..      ................
T Consensus       104 ~----------v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~------~~l~~~~~~~~~~~~~  167 (253)
T PF10647_consen  104 E----------VDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVP------RRLTGPRRVAPPLLSD  167 (253)
T ss_pred             E----------ecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCc------ceeccceEecccccCc
Confidence            0          01111112799999999999876555   356777765432211100      0000111111123457


Q ss_pred             eeEEEEcCCCcEEEEecCC
Q psy10662        190 VSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~d  208 (221)
                      +.++.|.+++.+++.+...
T Consensus       168 v~~v~W~~~~~L~V~~~~~  186 (253)
T PF10647_consen  168 VTDVAWSDDSTLVVLGRSA  186 (253)
T ss_pred             ceeeeecCCCEEEEEeCCC
Confidence            8999999999988777653

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=96.20  E-value=0.34  Score=36.08  Aligned_cols=176  Identities=11%  Similarity=0.104  Sum_probs=94.5

Q ss_pred             CceEEEEEe-cCCcEEEecCCCc------EEEEEcCCC----ccce-----eeecccc--------ceeEEEEeCCCCEE
Q psy10662         35 KAVSYVKFL-NKEDIVSASTDSQ------LKLWNINKP----NCLR-----SFVGHIN--------DKNFVGLATDGDYV   90 (221)
Q Consensus        35 ~~i~~~~~~-~~~~l~s~~~d~~------v~~wd~~~~----~~~~-----~~~~~~~--------~v~~~~~~~~~~~l   90 (221)
                      +.+..|.+. +++.+++.+.+|.      +..+++...    ..+.     .+....+        ..-++++.+++.++
T Consensus        20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~   99 (326)
T PF13449_consen   20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW   99 (326)
T ss_pred             CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence            457888888 4677888888888      666665431    1110     1111111        23477887788877


Q ss_pred             EEecCC------CeEEEEECCCCeeeEEEEeecccceeE--eeEEEeeCceEEEEEecCCCEEEEecCCC-------e--
Q psy10662         91 ACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLE--SSFVGHINDKNFVGLATDGDYVACGSENN-------S--  153 (221)
Q Consensus        91 ~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~--  153 (221)
                      ++.-.+      ..|..++.. ++.+..+..........  ..-...+...-+++++|+|+.|+++.+..       .  
T Consensus       100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~  178 (326)
T PF13449_consen  100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANP  178 (326)
T ss_pred             EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccccc
Confidence            777667      778888866 66655542111000000  01123345677899999999666655422       1  


Q ss_pred             -----EEEE--EcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-----CCCeEEEEECC
Q psy10662        154 -----LYIY--YKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-----SQGIIKIYVIP  217 (221)
Q Consensus       154 -----i~~~--d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~dg~i~iw~~~  217 (221)
                           ++++  |..+ +.....+.+.......      ......|..+.+-+++++|+.==     ....++++.+.
T Consensus       179 ~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~------~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~  249 (326)
T PF13449_consen  179 DNGSPLRILRYDPKTPGEPVAEYAYPLDPPPT------APGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVD  249 (326)
T ss_pred             ccCceEEEEEecCCCCCccceEEEEeCCcccc------ccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEE
Confidence                 4444  3333 2223333222111000      00345688899999998776521     23455555543

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=96.14  E-value=0.3  Score=38.06  Aligned_cols=136  Identities=9%  Similarity=0.082  Sum_probs=81.1

Q ss_pred             EEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCC--------EEEEecCCCeEEEEECCC-CeeeEEEEeeccc
Q psy10662         49 VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD--------YVACGSENNSLYIYYKGL-SKHMHAYRFDTVR  119 (221)
Q Consensus        49 ~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~  119 (221)
                      ..++....++-.|++.|+.+.....|...  -+.|.|..+        .|+-.+..+..+ .|.+. +..+..       
T Consensus       484 ~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFr-IDPR~~gNKi~v-------  553 (776)
T COG5167         484 LDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFR-IDPRARGNKIKV-------  553 (776)
T ss_pred             ecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEE-ecccccCCceee-------
Confidence            35566677888888889988888766653  577777532        344444444333 34432 211111       


Q ss_pred             ceeEeeEEEeeCceEEEEEec----CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE
Q psy10662        120 SMLESSFVGHINDKNFVGLAT----DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW  195 (221)
Q Consensus       120 ~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  195 (221)
                             .......+.-.|+.    ..-++|+++..|-|++||.-......               .+.+-...|..+..
T Consensus       554 -------~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKt---------------alP~lG~aIk~idv  611 (776)
T COG5167         554 -------VESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKT---------------ALPGLGDAIKHIDV  611 (776)
T ss_pred             -------eeehhccccccccccccccCceEEEecCCCceeeehhhcchhhh---------------cCcccccceeeeEe
Confidence                   11222222223332    34589999999999999842211110               12244567889999


Q ss_pred             cCCCcEEEEecCCCeEEEEECC
Q psy10662        196 RQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       196 ~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +.+|+++++.+. ..+.+-|++
T Consensus       612 ta~Gk~ilaTCk-~yllL~d~~  632 (776)
T COG5167         612 TANGKHILATCK-NYLLLTDVP  632 (776)
T ss_pred             ecCCcEEEEeec-ceEEEEecc
Confidence            999999887765 467777765

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=96.13  E-value=0.45  Score=36.86  Aligned_cols=31  Identities=19%  Similarity=0.240  Sum_probs=25.3

Q ss_pred             cceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        188 EFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       188 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ..|.+++..+..+.|++.+.+|.|.+|++..
T Consensus       190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~  220 (422)
T PF08801_consen  190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP  220 (422)
T ss_dssp             --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred             hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence            4499999999889999999999999999963

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=96.13  E-value=0.071  Score=37.09  Aligned_cols=78  Identities=13%  Similarity=0.215  Sum_probs=51.8

Q ss_pred             EecCCCEEEEecCCCeEEEEEcCCCCceeee-eeecccccccccc-cccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        138 LATDGDYVACGSENNSLYIYYKGLSKHMHAY-RFDTVRSMLERDR-NEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       138 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      +..++.++++-+.+|.+++||+.+.+....- .+.   ..+.... .-......|..+.++.+|.-|++-+ +|..+.|+
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~---pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~   93 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIA---PLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYS   93 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHH---HHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEec
Confidence            5567889999999999999999987754322 100   0000000 0003456789999999998888765 57788888


Q ss_pred             CCcc
Q psy10662        216 IPIR  219 (221)
Q Consensus       216 ~~~~  219 (221)
                      ..-+
T Consensus        94 ~~L~   97 (219)
T PF07569_consen   94 PDLG   97 (219)
T ss_pred             cccc
Confidence            7643

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.09  E-value=0.34  Score=36.20  Aligned_cols=56  Identities=7%  Similarity=0.021  Sum_probs=32.6

Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD  141 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  141 (221)
                      .+.|+|.|+++++++ ...|.|.+++ ..+.....+... .     ............++++|+
T Consensus         4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~-~-----~v~~~~~~gllgia~~p~   59 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADL-P-----EVFADGERGLLGIAFHPD   59 (331)
T ss_dssp             EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE--T-----TTBTSTTBSEEEEEE-TT
T ss_pred             ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceeccc-c-----cccccccCCcccceeccc
Confidence            578999999877665 5599999998 333331111000 0     001223345778999984

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG1900|consensus

Probab=96.03  E-value=0.15  Score=43.93  Aligned_cols=161  Identities=14%  Similarity=0.147  Sum_probs=90.3

Q ss_pred             EEecCCCcEEEEEcCCCccceeeeccccceeEEEE--------eCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccc
Q psy10662         49 VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL--------ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS  120 (221)
Q Consensus        49 ~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  120 (221)
                      +-.+.|..+.+|+.+++.....+.+....|..+..        .|.=+++...+.--.|.++-+.-.+....      ..
T Consensus        93 aWiTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~------~~  166 (1311)
T KOG1900|consen   93 AWITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGE------LS  166 (1311)
T ss_pred             eEEEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCc------cc
Confidence            33466899999999998777777766666666654        22233444444444466654321111000      00


Q ss_pred             eeE--eeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC--CCce-----eeeeeec--cccccccccccc-cccc
Q psy10662        121 MLE--SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL--SKHM-----HAYRFDT--VRSMLERDRNED-DTNE  188 (221)
Q Consensus       121 ~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~--~~~~-----~~~~~~~--~~~~~~~~~~~~-~~~~  188 (221)
                      ...  ..+.-....|.++....+|+.+.+|-. |  .+|.+.-  ....     ..+....  .......+.... .+..
T Consensus       167 ~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~d-g--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~d  243 (1311)
T KOG1900|consen  167 IFNTSFKISVDGVSVNCITYTENGRIFFAGRD-G--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKD  243 (1311)
T ss_pred             ccccceeeecCCceEEEEEeccCCcEEEeecC-C--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCC
Confidence            000  112223456788887788988876654 4  3454321  1100     0000000  001111122222 5667


Q ss_pred             ceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +|..+.....-+.|++-+..|+|.+|++.+
T Consensus       244 pI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  244 PIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             cceeeEeccccceeeeeccCceEEEEEccC
Confidence            899999998889999999999999999976

>PHA03098 kelch-like protein; Provisional

Probab=96.03  E-value=0.26  Score=39.40  Aligned_cols=105  Identities=14%  Similarity=0.065  Sum_probs=48.5

Q ss_pred             CCceEEEEeCC-----CeEEEEEecCCc-eeeEEEEeccCceEEEEEecCCcEEEecCC------CcEEEEEcCCCccce
Q psy10662          2 NSCHLAFGSAD-----HCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNKEDIVSASTD------SQLKLWNINKPNCLR   69 (221)
Q Consensus         2 ~~~~l~~~~~d-----g~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d------~~v~~wd~~~~~~~~   69 (221)
                      ++.+++.|+.+     ..+..||..+.. .....+..... -.+++...+..++.|+.+      ..+..||..+.+-..
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~-~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~  420 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRY-NPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSK  420 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCc-cceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeee
Confidence            45566777665     246667765221 11111111111 112233345556666632      457888987654322


Q ss_pred             e--eeccccceeEEEEeCCCCEEEEecCC--------CeEEEEECCCCee
Q psy10662         70 S--FVGHINDKNFVGLATDGDYVACGSEN--------NSLYIYYKGLSKH  109 (221)
Q Consensus        70 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~iwd~~~~~~  109 (221)
                      .  +...... .++. ..++..++.|+.+        ..+.+||..+.+.
T Consensus       421 ~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W  468 (534)
T PHA03098        421 GSPLPISHYG-GCAI-YHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKW  468 (534)
T ss_pred             cCCCCccccC-ceEE-EECCEEEEECCccCCCCCcccceEEEecCCCCce
Confidence            1  1111111 1222 2245566666643        2377888776654

>KOG3630|consensus

Probab=95.94  E-value=0.04  Score=46.50  Aligned_cols=104  Identities=10%  Similarity=-0.030  Sum_probs=67.1

Q ss_pred             CceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEE
Q psy10662         35 KAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA  112 (221)
Q Consensus        35 ~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~  112 (221)
                      ....++.|+|  ....+.+..|+.|++..+........--......++++|+|.|+.++.|-..|++.-|-..-. ....
T Consensus       156 vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~le-ik~~  234 (1405)
T KOG3630|consen  156 VFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLE-IKSE  234 (1405)
T ss_pred             cccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccc-eeec
Confidence            3456788886  345677788999999877543332222234557899999999999999999999998864322 1111


Q ss_pred             EEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe
Q psy10662        113 YRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG  148 (221)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  148 (221)
                      +.    ..    .. .....|.++.|-....++++-
T Consensus       235 ip----~P----p~-~e~yrvl~v~Wl~t~eflvvy  261 (1405)
T KOG3630|consen  235 IP----EP----PV-EENYRVLSVTWLSTQEFLVVY  261 (1405)
T ss_pred             cc----CC----Cc-CCCcceeEEEEecceeEEEEe
Confidence            10    00    00 114678889987766666543

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=95.90  E-value=0.054  Score=43.34  Aligned_cols=81  Identities=6%  Similarity=0.072  Sum_probs=43.2

Q ss_pred             cCCCEEEEecCCCeEEEEEcCC----CCceeeeeeecccc--cccccc-----cccccccceeEEEEcC----CCcEEEE
Q psy10662        140 TDGDYVACGSENNSLYIYYKGL----SKHMHAYRFDTVRS--MLERDR-----NEDDTNEFVSAVCWRQ----LSRVLVA  204 (221)
Q Consensus       140 ~~~~~l~~~~~d~~i~~~d~~~----~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~v~~~~~~~----~~~~l~~  204 (221)
                      ++...++.+..||.+.......    +.......+.....  .+....     ........+..++++.    +..+|++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4667888888999888887764    22222222222110  011110     0111223445566666    6789999


Q ss_pred             ecCCCeEEEEECCccc
Q psy10662        205 ANSQGIIKIYVIPIRV  220 (221)
Q Consensus       205 ~~~dg~i~iw~~~~~~  220 (221)
                      .+.|+++|+||+.+++
T Consensus       236 l~~D~~LRiW~l~t~~  251 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQ  251 (547)
T ss_dssp             EETTSEEEEEETTTTC
T ss_pred             EeCCCeEEEEECCCCe
Confidence            9999999999999876

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=95.81  E-value=0.71  Score=36.45  Aligned_cols=153  Identities=8%  Similarity=0.011  Sum_probs=73.1

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeecccc---ceeEEEEeCCC
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHIN---DKNFVGLATDG   87 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~---~v~~~~~~~~~   87 (221)
                      ..+...++|..  +.....+.........+...+++.|+.++. ..++.+|+. |+.+..+.....   .-..+...|+|
T Consensus       126 ~~~~~~~iD~~--G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~-~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nG  201 (477)
T PF05935_consen  126 SSSYTYLIDNN--GDVRWYLPLDSGSDNSFKQLPNGNLLIGSG-NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNG  201 (477)
T ss_dssp             BEEEEEEEETT--S-EEEEE-GGGT--SSEEE-TTS-EEEEEB-TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS
T ss_pred             CCceEEEECCC--ccEEEEEccCccccceeeEcCCCCEEEecC-CceEEEcCC-CCEEEeeecCCcccccccccEECCCC
Confidence            34455566643  555555543322222245557777666555 788888874 555554432221   13567778999


Q ss_pred             CEEEEecC-------------CCeEEEEECCCCeeeEEEEeecccceeEe---------eEEE-----eeCceEEEEEec
Q psy10662         88 DYVACGSE-------------NNSLYIYYKGLSKHMHAYRFDTVRSMLES---------SFVG-----HINDKNFVGLAT  140 (221)
Q Consensus        88 ~~l~~~~~-------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~---------~~~~-----~~~~v~~~~~~~  140 (221)
                      ++|+.+..             .-.|..+| .+++.+..+.+...-.....         ...+     .=--++++.+.+
T Consensus       202 n~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~  280 (477)
T PF05935_consen  202 NLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDP  280 (477)
T ss_dssp             -EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEET
T ss_pred             CEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeC
Confidence            98877661             22466778 88988888753221100000         0000     002367889988


Q ss_pred             -CCCEEEEecCCCeEEEEEcCCCCceeee
Q psy10662        141 -DGDYVACGSENNSLYIYYKGLSKHMHAY  168 (221)
Q Consensus       141 -~~~~l~~~~~d~~i~~~d~~~~~~~~~~  168 (221)
                       ++.+++++-....|...|.++++....+
T Consensus       281 ~dd~iivSsR~~s~V~~Id~~t~~i~Wil  309 (477)
T PF05935_consen  281 SDDSIIVSSRHQSAVIKIDYRTGKIKWIL  309 (477)
T ss_dssp             TTTEEEEEETTT-EEEEEE-TTS-EEEEE
T ss_pred             CCCeEEEEcCcceEEEEEECCCCcEEEEe
Confidence             5555555555568888887777765444

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>KOG1916|consensus

Probab=95.68  E-value=0.0039  Score=50.90  Aligned_cols=57  Identities=23%  Similarity=0.268  Sum_probs=33.3

Q ss_pred             cEEEecCCCcEEEEEcCCCccceeeeccccceeEE-----------EEeCCCCEEEEecCCCeEEEEEC
Q psy10662         47 DIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV-----------GLATDGDYVACGSENNSLYIYYK  104 (221)
Q Consensus        47 ~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~d~~v~iwd~  104 (221)
                      ++..+-.++.+++..+.+... ..+..|...+..+           .++|||..++.++.||.++.|.+
T Consensus       197 ~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi  264 (1283)
T KOG1916|consen  197 YICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI  264 (1283)
T ss_pred             eeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence            344445566666655543222 2223344333222           26789999999999998888864

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=95.67  E-value=0.46  Score=37.15  Aligned_cols=135  Identities=12%  Similarity=0.151  Sum_probs=79.9

Q ss_pred             EEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC--------CcEEEecCCCcEEEEEcCC-Cccceeeeccccce
Q psy10662          8 FGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK--------EDIVSASTDSQLKLWNINK-PNCLRSFVGHINDK   78 (221)
Q Consensus         8 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~~~~v   78 (221)
                      .|.....++--|++ .++.+..+..|..-  -+.|.|.        ..-+.|-.+..|.-.|.+- +..+.. ...+..+
T Consensus       485 dg~~~~kLykmDIE-rGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v-~esKdY~  560 (776)
T COG5167         485 DGGERDKLYKMDIE-RGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKV-VESKDYK  560 (776)
T ss_pred             cCCCcccceeeecc-cceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceee-eeehhcc
Confidence            45555566666776 67888888877654  4566652        2233444455555456543 222211 1122222


Q ss_pred             eEEEEeC----CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         79 NFVGLAT----DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        79 ~~~~~~~----~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      +--.|+.    ...++|+++..|.|++||--.. .            ....+++....|..+..+.+|+++++.+. ..+
T Consensus       561 tKn~Fss~~tTesGyIa~as~kGDirLyDRig~-r------------AKtalP~lG~aIk~idvta~Gk~ilaTCk-~yl  626 (776)
T COG5167         561 TKNKFSSGMTTESGYIAAASRKGDIRLYDRIGK-R------------AKTALPGLGDAIKHIDVTANGKHILATCK-NYL  626 (776)
T ss_pred             ccccccccccccCceEEEecCCCceeeehhhcc-h------------hhhcCcccccceeeeEeecCCcEEEEeec-ceE
Confidence            2223332    3458999999999999984211 1            11124566778889999999999887665 456


Q ss_pred             EEEEcC
Q psy10662        155 YIYYKG  160 (221)
Q Consensus       155 ~~~d~~  160 (221)
                      .+-|+.
T Consensus       627 lL~d~~  632 (776)
T COG5167         627 LLTDVP  632 (776)
T ss_pred             EEEecc
Confidence            677764

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.61  E-value=1  Score=36.99  Aligned_cols=125  Identities=10%  Similarity=0.133  Sum_probs=73.3

Q ss_pred             eeEEEEeC--CCCEEEEecCCCeEEEEECCC-------C-eeeEEEEeecccceeEeeEEEeeCceEEEEEe--cCCCEE
Q psy10662         78 KNFVGLAT--DGDYVACGSENNSLYIYYKGL-------S-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLA--TDGDYV  145 (221)
Q Consensus        78 v~~~~~~~--~~~~l~~~~~d~~v~iwd~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l  145 (221)
                      |+.+....  +...|+.+.+||.|.+|.+++       . +..... .......+ .-...-....++++++  ...++|
T Consensus       103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~-~~r~~i~P-~f~~~v~~SaWGLdIh~~~~~rlI  180 (717)
T PF08728_consen  103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSG-FSRLKIKP-FFHLRVGASAWGLDIHDYKKSRLI  180 (717)
T ss_pred             eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccc-cccccCCC-CeEeecCCceeEEEEEecCcceEE
Confidence            44444332  345788999999999997521       1 000000 00000000 0112234578899998  888899


Q ss_pred             EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC---c---EEEEecCCCeEEEEEC
Q psy10662        146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS---R---VLVAANSQGIIKIYVI  216 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~---~l~~~~~dg~i~iw~~  216 (221)
                      |++++...|.||-..........         .+   ...+...|.+++|-++.   .   +|++++-.|.+.+|++
T Consensus       181 AVSsNs~~VTVFaf~l~~~r~~~---------~~---s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  181 AVSSNSQEVTVFAFALVDERFYH---------VP---SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEecCCceEEEEEEecccccccc---------cc---ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            99999999999865432111000         00   11244568889987643   2   7888888999999887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.53  E-value=0.76  Score=34.89  Aligned_cols=136  Identities=13%  Similarity=0.099  Sum_probs=63.3

Q ss_pred             eEEEEEecC-Cce--eeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCC-----c--cce-eeec----cccce
Q psy10662         14 CVHYYDLRN-TKE--ALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP-----N--CLR-SFVG----HINDK   78 (221)
Q Consensus        14 ~i~i~~~~~-~~~--~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~-----~--~~~-~~~~----~~~~v   78 (221)
                      .|.+++-.+ .++  ....+...-.....+++.+++ |+.++.....++.|....     +  .+. .+..    +....
T Consensus        48 rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~  126 (367)
T TIGR02604        48 RILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSL  126 (367)
T ss_pred             EEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEeCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccc
Confidence            666665421 222  223443334456889988877 555555544444454321     1  111 1211    12347


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEEC-CC-----CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYK-GL-----SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      ..+.|.|+|.+.++-+..+.-..-.. ..     ...-..+++++...... .+.........++|+|+|+++++-..+
T Consensus       127 ~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e-~~a~G~rnp~Gl~~d~~G~l~~tdn~~  204 (367)
T TIGR02604       127 NSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLR-VVAHGFQNPYGHSVDSWGDVFFCDNDD  204 (367)
T ss_pred             cCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEE-EEecCcCCCccceECCCCCEEEEccCC
Confidence            78999999987665553211000000 00     00001222233322221 111122335679999999887765433

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=95.41  E-value=0.41  Score=36.78  Aligned_cols=41  Identities=7%  Similarity=0.082  Sum_probs=34.0

Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEE
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  113 (221)
                      .....+.++..+|++.+.|+...-|.|.++|+.++..++.+
T Consensus       305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmW  345 (415)
T PF14655_consen  305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMW  345 (415)
T ss_pred             cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhh
Confidence            34456889999999998888878899999999988777655

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.37  E-value=0.12  Score=36.02  Aligned_cols=61  Identities=7%  Similarity=0.089  Sum_probs=36.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeE-E------EE-------eccCceEEEEEecCCcEEEecCCCcEEEEEcC
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALA-V------FK-------GHRKAVSYVKFLNKEDIVSASTDSQLKLWNIN   63 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~-~------~~-------~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~   63 (221)
                      ++++|++-..+|.+++||+. .++.+. .      +.       .....|..+....++..+..-.+|..+.|+..
T Consensus        21 ~~~~Ll~iT~~G~l~vWnl~-~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~   95 (219)
T PF07569_consen   21 NGSYLLAITSSGLLYVWNLK-KGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPD   95 (219)
T ss_pred             CCCEEEEEeCCCeEEEEECC-CCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccc
Confidence            56788888999999999998 443321 1      11       13344566666554543333344666666654

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG4499|consensus

Probab=95.36  E-value=0.6  Score=32.66  Aligned_cols=48  Identities=8%  Similarity=0.165  Sum_probs=38.6

Q ss_pred             EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC
Q psy10662        135 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ  197 (221)
Q Consensus       135 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  197 (221)
                      .++...+|++.++.-+.++|...|..+++.+.++.+.               ...|+++||--
T Consensus       216 Gm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklP---------------t~qitsccFgG  263 (310)
T KOG4499|consen  216 GMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLP---------------TPQITSCCFGG  263 (310)
T ss_pred             cceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcC---------------CCceEEEEecC
Confidence            4555668888888889999999999999999888743               34688899853

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.26  E-value=1  Score=34.74  Aligned_cols=104  Identities=17%  Similarity=0.186  Sum_probs=59.5

Q ss_pred             CCCceEEEE-eCCC----eEEEEEecCCceeeE-EEEeccCceEEEEEecCC-cEEEecC-----------CCcEEEEEc
Q psy10662          1 MNSCHLAFG-SADH----CVHYYDLRNTKEALA-VFKGHRKAVSYVKFLNKE-DIVSAST-----------DSQLKLWNI   62 (221)
Q Consensus         1 ~~~~~l~~~-~~dg----~i~i~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~-~l~s~~~-----------d~~v~~wd~   62 (221)
                      ||++++|.+ +..|    .|+++|++ +++.+. .+...  ....+.|.+++ .|+....           ...|+.|.+
T Consensus       133 pdg~~la~~~s~~G~e~~~l~v~Dl~-tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~  209 (414)
T PF02897_consen  133 PDGKRLAYSLSDGGSEWYTLRVFDLE-TGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKL  209 (414)
T ss_dssp             TTSSEEEEEEEETTSSEEEEEEEETT-TTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEET
T ss_pred             CCCCEEEEEecCCCCceEEEEEEECC-CCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEEC
Confidence            688888865 3334    59999998 555443 33322  12348999753 3443322           223788888


Q ss_pred             CCCccc--eeeeccccc--eeEEEEeCCCCEEEEec---CC-CeEEEEECCCC
Q psy10662         63 NKPNCL--RSFVGHIND--KNFVGLATDGDYVACGS---EN-NSLYIYYKGLS  107 (221)
Q Consensus        63 ~~~~~~--~~~~~~~~~--v~~~~~~~~~~~l~~~~---~d-~~v~iwd~~~~  107 (221)
                      .+...-  ..+......  ...+..++++++++...   .+ ..+.+.|+..+
T Consensus       210 gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~  262 (414)
T PF02897_consen  210 GTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG  262 (414)
T ss_dssp             TS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred             CCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence            765433  333333332  56788899999865432   23 45788888764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG4460|consensus

Probab=95.26  E-value=0.56  Score=36.77  Aligned_cols=26  Identities=19%  Similarity=0.056  Sum_probs=20.7

Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIY  102 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iw  102 (221)
                      .|..+..++.|..++-.+.+|.+.++
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMe  130 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVME  130 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEE
Confidence            46677788999999988899966654

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=95.15  E-value=0.81  Score=36.43  Aligned_cols=114  Identities=8%  Similarity=0.058  Sum_probs=68.9

Q ss_pred             CceEEEEEecC----C-cEEEecCCCcEEEEEcCC-----Cccceeeeccc---c--ceeEEEEeCCCCEEEEecCCCeE
Q psy10662         35 KAVSYVKFLNK----E-DIVSASTDSQLKLWNINK-----PNCLRSFVGHI---N--DKNFVGLATDGDYVACGSENNSL   99 (221)
Q Consensus        35 ~~i~~~~~~~~----~-~l~s~~~d~~v~~wd~~~-----~~~~~~~~~~~---~--~v~~~~~~~~~~~l~~~~~d~~v   99 (221)
                      ..|..+.|.|-    . .|++......|.||.+..     .+.+.....+-   -  --..+.|+|....++.-.....-
T Consensus        57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvS  136 (671)
T PF15390_consen   57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVS  136 (671)
T ss_pred             ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCcee
Confidence            35899999962    2 488889999999999852     22222211111   1  12567899998887666554433


Q ss_pred             EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcC
Q psy10662        100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKG  160 (221)
Q Consensus       100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~  160 (221)
                      .++++.....           +....+ ...+.|.|.+|.+||+.|+++- ..=.-++||-.
T Consensus       137 V~~sV~~d~s-----------rVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  137 VLPSVHCDSS-----------RVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA  186 (671)
T ss_pred             EeeeeeeCCc-----------eEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence            4444432211           111112 3456799999999998776543 33346788743

>KOG1916|consensus

Probab=95.13  E-value=0.073  Score=44.04  Aligned_cols=23  Identities=26%  Similarity=0.283  Sum_probs=20.8

Q ss_pred             EecCCCEEEEecCCCeEEEEEcC
Q psy10662        138 LATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus       138 ~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      ++|||+.+++.+.||.+++|.+.
T Consensus       243 lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  243 LSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             eCCCCcEEEEeecCCccceeeee
Confidence            79999999999999999999753

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.09  E-value=1.7  Score=36.23  Aligned_cols=33  Identities=12%  Similarity=0.002  Sum_probs=27.8

Q ss_pred             ccceeEEEEeCCC---CEEEEecCCCeEEEEECCCC
Q psy10662         75 INDKNFVGLATDG---DYVACGSENNSLYIYYKGLS  107 (221)
Q Consensus        75 ~~~v~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~  107 (221)
                      ...|..+.|+|.+   ..|+.-..|+.+++||+...
T Consensus       146 ~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  146 SLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP  181 (717)
T ss_pred             CceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence            4478899999974   68999999999999999754

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=95.07  E-value=1.1  Score=34.01  Aligned_cols=196  Identities=13%  Similarity=0.119  Sum_probs=103.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEE--EEe---cCCc--EEEecC-C---CcEEEEEcCCC-ccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYV--KFL---NKED--IVSAST-D---SQLKLWNINKP-NCL   68 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~--~~~---~~~~--l~s~~~-d---~~v~~wd~~~~-~~~   68 (221)
                      |..++++...+++-+.+||+.  ++.++.+.  .+.+..+  .+.   .++.  |+.++. +   .+|++|.+... ..+
T Consensus        66 p~kSlIigTdK~~GL~VYdL~--Gk~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L  141 (381)
T PF02333_consen   66 PAKSLIIGTDKKGGLYVYDLD--GKELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGEL  141 (381)
T ss_dssp             GGG-EEEEEETTTEEEEEETT--S-EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEE
T ss_pred             cccceEEEEeCCCCEEEEcCC--CcEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcc
Confidence            345678888889999999997  56666664  2333333  322   2322  444442 2   46999987531 122


Q ss_pred             eeeec-------cccceeEEEE--eC-CCC-EEEEecCCCeEEEEECC---CCeeeEEEEeecccceeEeeEEEeeCceE
Q psy10662         69 RSFVG-------HINDKNFVGL--AT-DGD-YVACGSENNSLYIYYKG---LSKHMHAYRFDTVRSMLESSFVGHINDKN  134 (221)
Q Consensus        69 ~~~~~-------~~~~v~~~~~--~~-~~~-~l~~~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  134 (221)
                      ..+..       ....++.+++  +| ++. +++....+|.+..|.+.   .+...         ...++.+.. ...+-
T Consensus       142 ~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~---------~~lVR~f~~-~sQ~E  211 (381)
T PF02333_consen  142 TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVS---------ATLVREFKV-GSQPE  211 (381)
T ss_dssp             EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEE---------EEEEEEEE--SS-EE
T ss_pred             eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEe---------eEEEEEecC-CCcce
Confidence            22211       1123566666  33 344 56777889988888663   22111         122333332 44788


Q ss_pred             EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc--CCC-cEEEEec-CCCe
Q psy10662        135 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR--QLS-RVLVAAN-SQGI  210 (221)
Q Consensus       135 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~l~~~~-~dg~  210 (221)
                      .|........|..+-++.-|.-|+.+............       . .-......|-.+++-  +++ .||+..+ .+++
T Consensus       212 GCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~-------~-~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~s  283 (381)
T PF02333_consen  212 GCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVAS-------A-DGDGLVADVEGLALYYGSDGKGYLIVSSQGDNS  283 (381)
T ss_dssp             EEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEE-------B-SSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTE
T ss_pred             EEEEecccCCEEEecCccEEEEEecCCCCCCcceeeec-------c-cccccccCccceEEEecCCCCeEEEEEcCCCCe
Confidence            88888888899999999888888776433211100000       0 001123345555553  333 3555544 6889


Q ss_pred             EEEEECCc
Q psy10662        211 IKIYVIPI  218 (221)
Q Consensus       211 i~iw~~~~  218 (221)
                      ..+|+.+.
T Consensus       284 f~Vy~r~~  291 (381)
T PF02333_consen  284 FAVYDREG  291 (381)
T ss_dssp             EEEEESST
T ss_pred             EEEEecCC
Confidence            99999764

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=95.07  E-value=0.79  Score=35.28  Aligned_cols=85  Identities=7%  Similarity=0.140  Sum_probs=56.3

Q ss_pred             EEEeccCceEEEEEecCCcEEEe-cCCCcEEEEEcCCCccceeeeccccc-eeEEEEeCC-----------------CC-
Q psy10662         29 VFKGHRKAVSYVKFLNKEDIVSA-STDSQLKLWNINKPNCLRSFVGHIND-KNFVGLATD-----------------GD-   88 (221)
Q Consensus        29 ~~~~~~~~i~~~~~~~~~~l~s~-~~d~~v~~wd~~~~~~~~~~~~~~~~-v~~~~~~~~-----------------~~-   88 (221)
                      .+...+..+.+++.+|.+.+++. ..-|.|.++|+.++..++..++..+. +.-+.....                 .. 
T Consensus       302 ~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~  381 (415)
T PF14655_consen  302 GLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALF  381 (415)
T ss_pred             eeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEE
Confidence            34445566889999997776655 44689999999999888777765442 111111110                 11 


Q ss_pred             EEEEecCCCeEEEEECCCCeeeEEE
Q psy10662         89 YVACGSENNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        89 ~l~~~~~d~~v~iwd~~~~~~~~~~  113 (221)
                      +++-+..-|.|.||.++.+..+..+
T Consensus       382 LvIyaprRg~lEvW~~~~g~Rv~a~  406 (415)
T PF14655_consen  382 LVIYAPRRGILEVWSMRQGPRVAAF  406 (415)
T ss_pred             EEEEeccCCeEEEEecCCCCEEEEE
Confidence            2455667899999999988877665

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=95.04  E-value=0.55  Score=31.40  Aligned_cols=31  Identities=23%  Similarity=0.374  Sum_probs=25.9

Q ss_pred             cceeEEEEcCCC------cEEEEecCCCeEEEEECCc
Q psy10662        188 EFVSAVCWRQLS------RVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       188 ~~v~~~~~~~~~------~~l~~~~~dg~i~iw~~~~  218 (221)
                      ..+.+++|||.|      -+|++.+.+|.|.+|.-..
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            378999999954      4788999999999998763

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=94.91  E-value=0.63  Score=34.79  Aligned_cols=50  Identities=8%  Similarity=0.097  Sum_probs=34.4

Q ss_pred             ceEEEEEecCCcEEEecCCCcEEEEEcCCCcc---ceee----eccccceeEEEEeCC
Q psy10662         36 AVSYVKFLNKEDIVSASTDSQLKLWNINKPNC---LRSF----VGHINDKNFVGLATD   86 (221)
Q Consensus        36 ~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~---~~~~----~~~~~~v~~~~~~~~   86 (221)
                      ..++|+|.|++.++.+...|.|++++ ..+..   +..+    .........++++|+
T Consensus         3 ~P~~~a~~pdG~l~v~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~   59 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVAERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD   59 (331)
T ss_dssp             SEEEEEEETTSCEEEEETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred             CceEEEEeCCCcEEEEeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence            35789999988888888899999999 33332   2122    123456789999995

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=94.83  E-value=0.26  Score=39.57  Aligned_cols=70  Identities=13%  Similarity=0.283  Sum_probs=42.5

Q ss_pred             CCceEEEEeCCCeEEEEEecC---CceeeEE--EEec--------------------cCceEEEEEec-----CCcEEEe
Q psy10662          2 NSCHLAFGSADHCVHYYDLRN---TKEALAV--FKGH--------------------RKAVSYVKFLN-----KEDIVSA   51 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~---~~~~~~~--~~~~--------------------~~~i~~~~~~~-----~~~l~s~   51 (221)
                      +...++.+..||.+.......   .+.....  +..+                    ......++.+.     +.++++.
T Consensus       157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl  236 (547)
T PF11715_consen  157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL  236 (547)
T ss_dssp             SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred             CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence            567788888999988887763   1211111  1111                    12334444433     5668899


Q ss_pred             cCCCcEEEEEcCCCccceee
Q psy10662         52 STDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus        52 ~~d~~v~~wd~~~~~~~~~~   71 (221)
                      +.|+++|+||+.+++++...
T Consensus       237 ~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  237 SRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             ETTSEEEEEETTTTCEEEEE
T ss_pred             eCCCeEEEEECCCCeEEEEe
Confidence            99999999999999885544

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>KOG2377|consensus

Probab=94.81  E-value=1.4  Score=34.05  Aligned_cols=145  Identities=11%  Similarity=0.006  Sum_probs=84.0

Q ss_pred             eEEEEEecCCcEEEecCCCcEEEEEcCCCc--cceee-eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEE
Q psy10662         37 VSYVKFLNKEDIVSASTDSQLKLWNINKPN--CLRSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        37 i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  113 (221)
                      -+.+-|.+.+..+.+-..|.+.-|-+....  ...++ -..+++|.++.|++|.+.+|.--.+..|.+++....+.... 
T Consensus        25 sngvFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~-  103 (657)
T KOG2377|consen   25 SNGVFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLE-  103 (657)
T ss_pred             ccceeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhH-
Confidence            345556655555555556667777665432  22222 23466999999999999999999999999987643222111 


Q ss_pred             EeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEE
Q psy10662        114 RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAV  193 (221)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  193 (221)
                              .....+.....|....|+.+ .-+|.-...| +-+|.....+              ..+...+.|...|+-.
T Consensus       104 --------~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pek--------------rslRlVks~~~nvnWy  159 (657)
T KOG2377|consen  104 --------YTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEK--------------RSLRLVKSHNLNVNWY  159 (657)
T ss_pred             --------HHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhh--------------hhhhhhhhcccCccEE
Confidence                    11112233445777888765 3444444444 5555442221              1122233566678888


Q ss_pred             EEcCCCcEEEEec
Q psy10662        194 CWRQLSRVLVAAN  206 (221)
Q Consensus       194 ~~~~~~~~l~~~~  206 (221)
                      .|+++.+.+.-++
T Consensus       160 ~yc~et~v~LL~t  172 (657)
T KOG2377|consen  160 MYCPETAVILLST  172 (657)
T ss_pred             EEccccceEeeec
Confidence            8888877544433

>PRK13684 Ycf48-like protein; Provisional

Probab=94.64  E-value=1.4  Score=33.07  Aligned_cols=158  Identities=11%  Similarity=0.027  Sum_probs=83.1

Q ss_pred             cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee-eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEE
Q psy10662         34 RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA  112 (221)
Q Consensus        34 ~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~  112 (221)
                      ...+.++.+.|++.++..+..|.+..-.-..++.-... ..-...++.+.+.+++..++.+ ..|.+.+=....+..-..
T Consensus       172 ~g~~~~i~~~~~g~~v~~g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~  250 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVSSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSK  250 (334)
T ss_pred             cceEEEEEECCCCeEEEEeCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCcccc
Confidence            34678888888877777777786654211122211111 2234578899999998876655 557654322233222111


Q ss_pred             EEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeE
Q psy10662        113 YRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSA  192 (221)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  192 (221)
                      .     .    .........+..+.+.|++..+++ +.+|.+.. ....++.-...            .....-....+.
T Consensus       251 ~-----~----~~~~~~~~~l~~v~~~~~~~~~~~-G~~G~v~~-S~d~G~tW~~~------------~~~~~~~~~~~~  307 (334)
T PRK13684        251 P-----I----IPEITNGYGYLDLAYRTPGEIWAG-GGNGTLLV-SKDGGKTWEKD------------PVGEEVPSNFYK  307 (334)
T ss_pred             c-----c----CCccccccceeeEEEcCCCCEEEE-cCCCeEEE-eCCCCCCCeEC------------CcCCCCCcceEE
Confidence            0     0    000011234677888888776554 45665543 22322221111            100111235677


Q ss_pred             EEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        193 VCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       193 ~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      +.|..+++.+++ +..|.|.-|+-
T Consensus       308 ~~~~~~~~~~~~-G~~G~il~~~~  330 (334)
T PRK13684        308 IVFLDPEKGFVL-GQRGVLLRYVG  330 (334)
T ss_pred             EEEeCCCceEEE-CCCceEEEecC
Confidence            887777666665 46788877753

>PHA02790 Kelch-like protein; Provisional

Probab=94.64  E-value=1.8  Score=34.33  Aligned_cols=102  Identities=11%  Similarity=-0.023  Sum_probs=47.2

Q ss_pred             CCceEEEEeCCC--eEEEEEecCCc-eeeEEEEeccCceEEEEEecCCcEEEecCCC---cEEEEEcCCCccce--eeec
Q psy10662          2 NSCHLAFGSADH--CVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNKEDIVSASTDS---QLKLWNINKPNCLR--SFVG   73 (221)
Q Consensus         2 ~~~~l~~~~~dg--~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~---~v~~wd~~~~~~~~--~~~~   73 (221)
                      ++.+.+.|+.++  .+..||..... ..+..+..... -.+++...+...+.|+.++   .+..||.++.+-..  .+..
T Consensus       318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~-~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~  396 (480)
T PHA02790        318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRC-NPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYY  396 (480)
T ss_pred             CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCc-ccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCC
Confidence            456667776543  56677765211 11111111111 1122333455566776543   46778876653322  1111


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH  109 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  109 (221)
                      ..... +++ .-++...+.|+   .+.+||.++.+.
T Consensus       397 ~r~~~-~~~-~~~~~IYv~GG---~~e~ydp~~~~W  427 (480)
T PHA02790        397 PHYKS-CAL-VFGRRLFLVGR---NAEFYCESSNTW  427 (480)
T ss_pred             ccccc-eEE-EECCEEEEECC---ceEEecCCCCcE
Confidence            11111 222 23455666664   467788776544

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=94.57  E-value=1.2  Score=31.95  Aligned_cols=111  Identities=13%  Similarity=0.068  Sum_probs=64.2

Q ss_pred             ceeEEEEeCCCCEEEEec---CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         77 DKNFVGLATDGDYVACGS---ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      .+.+.+++++++.++...   ....+.++...  ......            .  ....+..-.|++++...+....+..
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~------------~--~g~~l~~PS~d~~g~~W~v~~~~~~   88 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPV------------L--TGGSLTRPSWDPDGWVWTVDDGSGG   88 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Ccceee------------c--cCCccccccccCCCCEEEEEcCCCc
Confidence            678999999999776655   23345555432  222111            1  2235667789999877777666666


Q ss_pred             EEEEE-cCCCCce-eeeeeecccccccccccccccccceeEEEEcCCCcEEEEec---CCCeEEEEEC
Q psy10662        154 LYIYY-KGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN---SQGIIKIYVI  216 (221)
Q Consensus       154 i~~~d-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iw~~  216 (221)
                      .+++. ...+... .....             ......|..+.+||||..++...   .++.|.+=-+
T Consensus        89 ~~~~~~~~~g~~~~~~v~~-------------~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V  143 (253)
T PF10647_consen   89 VRVVRDSASGTGEPVEVDW-------------PGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV  143 (253)
T ss_pred             eEEEEecCCCcceeEEecc-------------cccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence            66663 2222211 11110             01111799999999998876655   3566665443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=94.52  E-value=0.45  Score=31.82  Aligned_cols=30  Identities=17%  Similarity=0.078  Sum_probs=25.0

Q ss_pred             ceEEEEEecCC------CEEEEecCCCeEEEEEcCC
Q psy10662        132 DKNFVGLATDG------DYVACGSENNSLYIYYKGL  161 (221)
Q Consensus       132 ~v~~~~~~~~~------~~l~~~~~d~~i~~~d~~~  161 (221)
                      .+..++|||.|      -+|++-+.++.|.+|....
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            68899999944      3789999999999998663

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=94.13  E-value=2.1  Score=33.21  Aligned_cols=34  Identities=9%  Similarity=0.055  Sum_probs=26.2

Q ss_pred             CceEEEEEecCCCEEEEecCCCeEEEEEcCCCCc
Q psy10662        131 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH  164 (221)
Q Consensus       131 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~  164 (221)
                      ..+..++..+..+.+++...+|.|.+|++..+..
T Consensus       190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~~~  223 (422)
T PF08801_consen  190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGPGGS  223 (422)
T ss_dssp             --EEEEEEETTTTEEEEEESSE-EEEEEE-SS-E
T ss_pred             hceeeEEecCCcCEEEEEeCCCcEEEEEEeCCCC
Confidence            3488999999889999999999999999986433

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=94.10  E-value=0.4  Score=36.89  Aligned_cols=149  Identities=11%  Similarity=0.138  Sum_probs=80.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEE-EeccC----ceE-EEEEecC-CcEEEecCCCcEEEE-EcCCCcc-----
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVF-KGHRK----AVS-YVKFLNK-EDIVSASTDSQLKLW-NINKPNC-----   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-~~~~~----~i~-~~~~~~~-~~l~s~~~d~~v~~w-d~~~~~~-----   67 (221)
                      |||+.|..-+. .++.++++.+..-..+.+ ....+    .|+ ++..-.+ ..++.++.||.|.-| |++....     
T Consensus       230 Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~~~p~l~h  308 (733)
T COG4590         230 PDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRRDGQPHLNH  308 (733)
T ss_pred             CCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeeecCCCCccee
Confidence            67887776654 688889887322111111 11111    122 1111123 348888999999877 5543321     


Q ss_pred             ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         68 LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                      ++.++-...++..+.-..+.+-+++-+.+|++..+.....+.+-              +......+.-+++||.+.++++
T Consensus       309 ~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL--------------~~~~~~~~~~~~~Sp~~~~Ll~  374 (733)
T COG4590         309 IRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL--------------FERAYQAPQLVAMSPNQAYLLS  374 (733)
T ss_pred             eeccccCcccceeeccccccceEEEEcCCCceeeeecccCccee--------------hhhhhcCcceeeeCcccchhee
Confidence            11121112333333323334457777788888777544333221              1112234566889999998885


Q ss_pred             ecCCCeEEEEEcCCCCce
Q psy10662        148 GSENNSLYIYYKGLSKHM  165 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~  165 (221)
                      - +.|.++++.+++..+.
T Consensus       375 e-~~gki~~~~l~Nr~Pe  391 (733)
T COG4590         375 E-DQGKIRLAQLENRNPE  391 (733)
T ss_pred             e-cCCceEEEEecCCCCC
Confidence            4 4577999988766543

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=94.00  E-value=1.7  Score=31.75  Aligned_cols=162  Identities=10%  Similarity=0.022  Sum_probs=80.3

Q ss_pred             CcEEEEEcCCCccceeeec------cccceeEEEEeCCC-----CEE-EEecCCCeEEEEECCCCeeeEEEEeecccce-
Q psy10662         55 SQLKLWNINKPNCLRSFVG------HINDKNFVGLATDG-----DYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVRSM-  121 (221)
Q Consensus        55 ~~v~~wd~~~~~~~~~~~~------~~~~v~~~~~~~~~-----~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-  121 (221)
                      -.|.+||+.+.+.++.+.-      ..+.+..+.+....     .++ ++=+..+-+.|+|+.+++..+...-...... 
T Consensus        34 pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~  113 (287)
T PF03022_consen   34 PKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPD  113 (287)
T ss_dssp             -EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-S
T ss_pred             cEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceecc
Confidence            3678889998887776532      23457777776522     232 3444456799999999987665532111110 


Q ss_pred             -eEe----eEEEeeCceEEEEEec---CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEE
Q psy10662        122 -LES----SFVGHINDKNFVGLAT---DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAV  193 (221)
Q Consensus       122 -~~~----~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  193 (221)
                       ...    ........+..++.+|   +++.|.-....+ -++|.+.+......-.... ......+..+.........+
T Consensus       114 ~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss-~~ly~v~T~~L~~~~~~~~-~~~~~~v~~lG~k~~~s~g~  191 (287)
T PF03022_consen  114 AGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSS-RKLYRVPTSVLRDPSLSDA-QALASQVQDLGDKGSQSDGM  191 (287)
T ss_dssp             SEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT--SEEEEEEHHHHCSTT--HH-H-HHHT-EEEEE---SECEE
T ss_pred             ccceeccCceEecCCCccccccCCCCCCccEEEEEeCCC-CcEEEEEHHHhhCcccccc-ccccccceeccccCCCCceE
Confidence             000    0111223366666655   555555443222 1122222111000000000 00001111111112345678


Q ss_pred             EEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        194 CWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       194 ~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +++++|.++++--..+.|..|+..+
T Consensus       192 ~~D~~G~ly~~~~~~~aI~~w~~~~  216 (287)
T PF03022_consen  192 AIDPNGNLYFTDVEQNAIGCWDPDG  216 (287)
T ss_dssp             EEETTTEEEEEECCCTEEEEEETTT
T ss_pred             EECCCCcEEEecCCCCeEEEEeCCC
Confidence            8999999999998999999999875

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>KOG4460|consensus

Probab=93.81  E-value=2.7  Score=33.26  Aligned_cols=25  Identities=8%  Similarity=-0.056  Sum_probs=14.4

Q ss_pred             eEEEEEec-CCcEEEecCCCcEEEEE
Q psy10662         37 VSYVKFLN-KEDIVSASTDSQLKLWN   61 (221)
Q Consensus        37 i~~~~~~~-~~~l~s~~~d~~v~~wd   61 (221)
                      |..+..++ +..++..+.+|.+.++=
T Consensus       106 V~~vl~s~~GS~VaL~G~~Gi~vMeL  131 (741)
T KOG4460|consen  106 VYQVLLSPTGSHVALIGIKGLMVMEL  131 (741)
T ss_pred             EEEEEecCCCceEEEecCCeeEEEEc
Confidence            44444455 44466667777766654

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=93.79  E-value=1.7  Score=35.89  Aligned_cols=101  Identities=11%  Similarity=0.086  Sum_probs=64.4

Q ss_pred             CceEEEEeCCCeEEEEEecC-------C---c---------eeeEEEEeccCceEEEEEe--cCCc-EEEecCCCcEEEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRN-------T---K---------EALAVFKGHRKAVSYVKFL--NKED-IVSASTDSQLKLW   60 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~-------~---~---------~~~~~~~~~~~~i~~~~~~--~~~~-l~s~~~d~~v~~w   60 (221)
                      ...|+.|..||.|.+|..+.       .   .         ++...+. -...+++++++  .... +|+++....|.||
T Consensus       114 ~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF  192 (717)
T PF08728_consen  114 EEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVF  192 (717)
T ss_pred             eeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence            46789999999999997631       0   0         1122222 34578999998  5555 5555556667776


Q ss_pred             EcCCC--cccee-eeccccceeEEEEeCCC-----C-EEEEecCCCeEEEEEC
Q psy10662         61 NINKP--NCLRS-FVGHINDKNFVGLATDG-----D-YVACGSENNSLYIYYK  104 (221)
Q Consensus        61 d~~~~--~~~~~-~~~~~~~v~~~~~~~~~-----~-~l~~~~~d~~v~iwd~  104 (221)
                      -....  +.... -..+...|.+++|-++.     . .+++++-.|.+.+|++
T Consensus       193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            55432  11111 11256678999997643     2 6788888999998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG1897|consensus

Probab=93.70  E-value=4  Score=34.85  Aligned_cols=153  Identities=14%  Similarity=0.102  Sum_probs=90.9

Q ss_pred             eEEEEEec--CCcEEEec----------CCCcEEEEEcCCCccceeeecc--ccceeEEEEeCCCCEEEEecCCCeEEEE
Q psy10662         37 VSYVKFLN--KEDIVSAS----------TDSQLKLWNINKPNCLRSFVGH--INDKNFVGLATDGDYVACGSENNSLYIY  102 (221)
Q Consensus        37 i~~~~~~~--~~~l~s~~----------~d~~v~~wd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~iw  102 (221)
                      |.++.|.+  +.+++.|.          ..|.|.+|.+...+.+.....+  ++.+.++..- +|+++|.  -+..|++|
T Consensus       777 i~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~--In~~vrLy  853 (1096)
T KOG1897|consen  777 IISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAG--INQSVRLY  853 (1096)
T ss_pred             eeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEe--cCcEEEEE
Confidence            45555763  44555553          2577888887764443333222  3344444332 4555553  45679999


Q ss_pred             ECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccc
Q psy10662        103 YKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRN  182 (221)
Q Consensus       103 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  182 (221)
                      +..+.+.++.             -..+...+..+...-.|..+++|.--+.+.+...+..+.....           . .
T Consensus       854 e~t~~~eLr~-------------e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~e-----------v-A  908 (1096)
T KOG1897|consen  854 EWTTERELRI-------------ECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEE-----------V-A  908 (1096)
T ss_pred             Eccccceehh-------------hhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEE-----------e-e
Confidence            9887755432             2355667888888889999999999988887654433311111           0 1


Q ss_pred             ccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        183 EDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       183 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ..-+..+.+++.+-.+.. ++.+..+|.+.+-..++
T Consensus       909 rD~~p~Wmtaveil~~d~-ylgae~~gNlf~v~~d~  943 (1096)
T KOG1897|consen  909 RDYNPNWMTAVEILDDDT-YLGAENSGNLFTVRKDS  943 (1096)
T ss_pred             hhhCccceeeEEEecCce-EEeecccccEEEEEecC
Confidence            123566777887765544 44455677777766553

>KOG2377|consensus

Probab=93.56  E-value=2.4  Score=32.95  Aligned_cols=76  Identities=13%  Similarity=0.209  Sum_probs=49.5

Q ss_pred             eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       129 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      ..++|.++.|++|.+.+|+--.+..|.+++....+...           .........+..|...+|+.+ .-+|.-+..
T Consensus        65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l-----------~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~  132 (657)
T KOG2377|consen   65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQL-----------EYTQECKTKNANILGFCWTSS-TEIAFITDQ  132 (657)
T ss_pred             CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhh-----------HHHHHhccCcceeEEEEEecC-eeEEEEecC
Confidence            45689999999999999999999999999864332221           111222334556888888766 445554444


Q ss_pred             CeEEEEECC
Q psy10662        209 GIIKIYVIP  217 (221)
Q Consensus       209 g~i~iw~~~  217 (221)
                      | +.+|.+.
T Consensus       133 G-~e~y~v~  140 (657)
T KOG2377|consen  133 G-IEFYQVL  140 (657)
T ss_pred             C-eEEEEEc
Confidence            4 4555543

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=93.50  E-value=2.4  Score=31.68  Aligned_cols=128  Identities=9%  Similarity=0.070  Sum_probs=64.5

Q ss_pred             cceeEEEEeCCCCEEEEecCCCe------EEEEECCCC-eeeEEEEeecccceeEee-----EEEeeCceEEEEEecCCC
Q psy10662         76 NDKNFVGLATDGDYVACGSENNS------LYIYYKGLS-KHMHAYRFDTVRSMLESS-----FVGHINDKNFVGLATDGD  143 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~------v~iwd~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~  143 (221)
                      +.+..+.+.|++..+++.+.+|.      +...++... ........  .....+..     +.......-++++.+++.
T Consensus        20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~   97 (326)
T PF13449_consen   20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTI--LDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS   97 (326)
T ss_pred             CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEe--ccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence            45788888876666777777776      554444330 01111000  00000000     000111333677777887


Q ss_pred             EEEEecCC------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        144 YVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       144 ~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      ++++.=.+      ..|..++.. +.....+.....-............+...-+++++|+|+.|+++.
T Consensus        98 ~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~  165 (326)
T PF13449_consen   98 FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM  165 (326)
T ss_pred             EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence            77766556      678888766 555444422110000000001123456688999999999766654

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=93.32  E-value=0.52  Score=36.29  Aligned_cols=165  Identities=14%  Similarity=0.041  Sum_probs=83.1

Q ss_pred             EEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccc-eee-ecccc----cee-EEEEeCCCCEEEEecCCCeEEEE
Q psy10662         30 FKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL-RSF-VGHIN----DKN-FVGLATDGDYVACGSENNSLYIY  102 (221)
Q Consensus        30 ~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~-~~~-~~~~~----~v~-~~~~~~~~~~l~~~~~d~~v~iw  102 (221)
                      +......+..+-..|++..+-.-....+.++++.+.... +.+ ....+    .|+ .+..-..|..+..++.||.|.-|
T Consensus       216 L~~~~~~v~qllL~Pdg~~LYv~~g~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQW  295 (733)
T COG4590         216 LSVPFSDVSQLLLTPDGKTLYVRTGSELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQW  295 (733)
T ss_pred             cCCCccchHhhEECCCCCEEEEecCCeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeee
Confidence            333445566666667766433333377888887553221 111 11111    222 22223356678889999999888


Q ss_pred             -ECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccc
Q psy10662        103 -YKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDR  181 (221)
Q Consensus       103 -d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~  181 (221)
                       |.+..... .+       ..++.+.-...++..+.-..+.+-+++-...|.+.++.....+.+-.-             
T Consensus       296 Fdvr~~~~p-~l-------~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~-------------  354 (733)
T COG4590         296 FDVRRDGQP-HL-------NHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFE-------------  354 (733)
T ss_pred             eeeecCCCC-cc-------eeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehh-------------
Confidence             44322110 00       001111111122222222223445566666666666643322221100             


Q ss_pred             cccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        182 NEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       182 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                         .--..+.-+++||.+.+|++- ..|.|+++.++++
T Consensus       355 ---~~~~~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr  388 (733)
T COG4590         355 ---RAYQAPQLVAMSPNQAYLLSE-DQGKIRLAQLENR  388 (733)
T ss_pred             ---hhhcCcceeeeCcccchheee-cCCceEEEEecCC
Confidence               111245568999999999886 4678999998765

>KOG2280|consensus

Probab=93.23  E-value=4.2  Score=33.65  Aligned_cols=69  Identities=13%  Similarity=0.105  Sum_probs=44.2

Q ss_pred             CceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECC
Q psy10662         35 KAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  105 (221)
Q Consensus        35 ~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~  105 (221)
                      +...++..+|.+..=..+.-..|+||+. +|+.+..+.-....+-.+.|+.+. .|++...+|++++|++-
T Consensus        44 gGpIAV~r~p~~~~~~~~a~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~  112 (829)
T KOG2280|consen   44 GGPIAVTRSPSKLVPLYSARPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLL  112 (829)
T ss_pred             CCceEEEecccccccccccceeEEEEec-cccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecc
Confidence            3344555555332111144567889987 566655553334478889998664 56777899999999874

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=93.22  E-value=2.2  Score=30.35  Aligned_cols=147  Identities=14%  Similarity=0.061  Sum_probs=69.6

Q ss_pred             EEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCC---CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCce
Q psy10662         57 LKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSEN---NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDK  133 (221)
Q Consensus        57 v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  133 (221)
                      -.+||+.+.+....-....--+.+-.+-|+|+++.+|+..   ..+++++.........  |....    ..+ .....-
T Consensus        48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~--w~e~~----~~m-~~~RWY  120 (243)
T PF07250_consen   48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCD--WTESP----NDM-QSGRWY  120 (243)
T ss_pred             EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCC--ceECc----ccc-cCCCcc
Confidence            4588988765432211122234445677899999988752   3467776433000000  00000    001 111112


Q ss_pred             EEEEEecCCCEEEEecCCCe-EEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662        134 NFVGLATDGDYVACGSENNS-LYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       134 ~~~~~~~~~~~l~~~~~d~~-i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  211 (221)
                      .....-|||+.|+.|+.... ..+|..... .....+.+-.      .... ......---+...|+|++++.+..+.  
T Consensus       121 pT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~------~~~~-~~~~nlYP~~~llPdG~lFi~an~~s--  191 (243)
T PF07250_consen  121 PTATTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLS------QTSD-TLPNNLYPFVHLLPDGNLFIFANRGS--  191 (243)
T ss_pred             ccceECCCCCEEEEeCcCCCcccccCCccCCCCceeeecch------hhhc-cCccccCceEEEcCCCCEEEEEcCCc--
Confidence            23445689999999988742 333332111 1111111000      0000 00111122466789999999987765  


Q ss_pred             EEEECCcc
Q psy10662        212 KIYVIPIR  219 (221)
Q Consensus       212 ~iw~~~~~  219 (221)
                      .+||..+.
T Consensus       192 ~i~d~~~n  199 (243)
T PF07250_consen  192 IIYDYKTN  199 (243)
T ss_pred             EEEeCCCC
Confidence            45566554

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=93.21  E-value=0.48  Score=22.81  Aligned_cols=40  Identities=15%  Similarity=0.044  Sum_probs=26.0

Q ss_pred             CCCceEEEEe-CCCeEEEEEecCCceeeEEEEeccCceEEEEE
Q psy10662          1 MNSCHLAFGS-ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKF   42 (221)
Q Consensus         1 ~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~   42 (221)
                      |++++|.++. .++.|.++|.. +.+.+..+.. ......++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~-~~~~~~~i~v-g~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTA-TNKVIATIPV-GGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECC-CCeEEEEEEC-CCCCceEEe
Confidence            6777666654 57899999997 6776666664 233334443

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PRK13684 Ycf48-like protein; Provisional

Probab=93.07  E-value=2.9  Score=31.38  Aligned_cols=112  Identities=11%  Similarity=0.008  Sum_probs=61.0

Q ss_pred             cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec----cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee
Q psy10662         34 RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG----HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH  109 (221)
Q Consensus        34 ~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  109 (221)
                      ...++++.+.+++.++..+..|.+++=....++.-.....    ....+..+.+.|++..++ ++.+|.+. .....++.
T Consensus       214 ~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~t  291 (334)
T PRK13684        214 SRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGKT  291 (334)
T ss_pred             cccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCCC
Confidence            4568899998877777777788775422333332221111    123477888998777555 44566554 33333332


Q ss_pred             eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662        110 MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      -...          .....-....+.+.|..+++.++ .+..|.|.-|+
T Consensus       292 W~~~----------~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~  329 (334)
T PRK13684        292 WEKD----------PVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYV  329 (334)
T ss_pred             CeEC----------CcCCCCCcceEEEEEeCCCceEE-ECCCceEEEec
Confidence            1111          00011123466677776666655 55677776664

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=92.95  E-value=3.7  Score=32.23  Aligned_cols=61  Identities=8%  Similarity=-0.080  Sum_probs=36.6

Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                      ...+.|+|.|++++|++--..|.|++++...+......  ..  ....  ..........++++|+-
T Consensus        30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~--~l--~~v~--~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVF--TL--PEIV--NDAQHNGLLGLALHPDF   90 (454)
T ss_pred             CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeee--cC--Ccee--ccCCCCceeeEEECCCc
Confidence            34688999999987776655699999876544321111  00  0000  01125667889999874

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=92.77  E-value=0.41  Score=22.78  Aligned_cols=26  Identities=15%  Similarity=0.310  Sum_probs=18.3

Q ss_pred             ceeEEEEcCCCcEEEEec-CC--CeEEEE
Q psy10662        189 FVSAVCWRQLSRVLVAAN-SQ--GIIKIY  214 (221)
Q Consensus       189 ~v~~~~~~~~~~~l~~~~-~d--g~i~iw  214 (221)
                      .-....|+|||+.|+-.+ .+  |...||
T Consensus        10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen   10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             cccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            456789999998887665 35  666666

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=92.59  E-value=3.6  Score=31.31  Aligned_cols=180  Identities=14%  Similarity=0.188  Sum_probs=74.7

Q ss_pred             EEEEEecCCceeeEEEEeccCceEEEEEec-C-CcEEEecC---CCc-EEEEEcCC-Cccceeeeccc--cceeEEEEeC
Q psy10662         15 VHYYDLRNTKEALAVFKGHRKAVSYVKFLN-K-EDIVSAST---DSQ-LKLWNINK-PNCLRSFVGHI--NDKNFVGLAT   85 (221)
Q Consensus        15 i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~---d~~-v~~wd~~~-~~~~~~~~~~~--~~v~~~~~~~   85 (221)
                      |.--|+. +++....+. -...+.-+.|+| + ..|+-|-+   +.. -+||-+++ +...+.+..+.  ..+..=-|.|
T Consensus       170 i~~idl~-tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~  247 (386)
T PF14583_consen  170 IFTIDLK-TGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVP  247 (386)
T ss_dssp             EEEEETT-T--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-T
T ss_pred             EEEEECC-CCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccC
Confidence            3344554 444433333 566788899997 3 33444432   222 36776653 33333332222  2345556789


Q ss_pred             CCCEEEE-----ecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC--------
Q psy10662         86 DGDYVAC-----GSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN--------  152 (221)
Q Consensus        86 ~~~~l~~-----~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------  152 (221)
                      +|..+.-     ++.+..|.-+|+.+++.....               ......-+--+++|++++-=+.|.        
T Consensus       248 DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~---------------~~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~  312 (386)
T PF14583_consen  248 DGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLM---------------EMPWCSHFMSSPDGKLFVGDGGDAPVDVADAG  312 (386)
T ss_dssp             TSS-EEEEEEETTT--EEEEEE-TTT--EEEEE---------------EE-SEEEEEE-TTSSEEEEEE-----------
T ss_pred             CCCEEEEEeecCCCCceEEEeeCCCCCCceEEE---------------eCCceeeeEEcCCCCEEEecCCCCCccccccc
Confidence            9986543     223445666777766542211               111222344467888776433332        


Q ss_pred             --------eEEEEEcCCCCceeeeeeeccccccccccccccccc-ceeEEEEcCCCcEEEEec-CCCeEEEEECC
Q psy10662        153 --------SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNE-FVSAVCWRQLSRVLVAAN-SQGIIKIYVIP  217 (221)
Q Consensus       153 --------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~  217 (221)
                              .|++++...+.......... .  +.   ...++.. .=....|+|||++++-.| ..|...||-++
T Consensus       313 ~~~~~~~p~i~~~~~~~~~~~~l~~h~~-s--w~---v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~  381 (386)
T PF14583_consen  313 GYKIENDPWIYLFDVEAGRFRKLARHDT-S--WK---VLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVE  381 (386)
T ss_dssp             --------EEEEEETTTTEEEEEEE-------------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred             cceecCCcEEEEeccccCceeeeeeccC-c--ce---eecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEEe
Confidence                    45556665544322111110 0  00   0011110 113578999999876554 57777776543

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=92.49  E-value=1.8  Score=27.48  Aligned_cols=106  Identities=9%  Similarity=0.010  Sum_probs=66.9

Q ss_pred             ceEEEEeCCCeEEEEEecCCc-------eeeEEEEeccCceEEEEEec-----CCcEEEecCCCcEEEEEcCCCccceee
Q psy10662          4 CHLAFGSADHCVHYYDLRNTK-------EALAVFKGHRKAVSYVKFLN-----KEDIVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~-------~~~~~~~~~~~~i~~~~~~~-----~~~l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      ..|+.+..-|.|.|++.....       ..+..+. -...|++|+-.+     +.-++.-+....+..||+.+...+.. 
T Consensus        11 pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~Fy-   88 (136)
T PF14781_consen   11 PCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLFY-   88 (136)
T ss_pred             eeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhhh-
Confidence            468888899999999876321       2334444 566788887653     22255555677899999987766543 


Q ss_pred             eccccceeEEEEeCC---CCEEEEecCCCeEEEEECCCCeeeE
Q psy10662         72 VGHINDKNFVGLATD---GDYVACGSENNSLYIYYKGLSKHMH  111 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~iwd~~~~~~~~  111 (221)
                      +.-.+.|+++.+-.-   ..-++..+.+..|.-||.+-.+...
T Consensus        89 ke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fW  131 (136)
T PF14781_consen   89 KEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFW  131 (136)
T ss_pred             hhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEE
Confidence            334566777777321   2235555566678888766555443

>KOG1900|consensus

Probab=92.48  E-value=7.2  Score=34.48  Aligned_cols=149  Identities=11%  Similarity=0.121  Sum_probs=86.5

Q ss_pred             EeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-c--C------CcEEEecCCCcEEEEEcCC----Cccc-----ee
Q psy10662          9 GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-N--K------EDIVSASTDSQLKLWNINK----PNCL-----RS   70 (221)
Q Consensus         9 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~--~------~~l~s~~~d~~v~~wd~~~----~~~~-----~~   70 (221)
                      .+.|+.+.+|+.++ +.....+.+-+..|..+..- |  +      ++++..+.--.|.++-+.-    +...     ..
T Consensus        95 iTiDn~L~lWny~~-~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~  173 (1311)
T KOG1900|consen   95 ITIDNNLFLWNYES-DNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFK  173 (1311)
T ss_pred             EEeCCeEEEEEcCC-CCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCccccccccee
Confidence            45689999999984 45556666666667776654 2  2      2344444445555554422    1111     11


Q ss_pred             eeccccceeEEEEeCCCCEEEEecCCCeEEEEEC----CCC---eeeEEEEeecccc---ee---EeeEE-EeeCceEEE
Q psy10662         71 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYK----GLS---KHMHAYRFDTVRS---ML---ESSFV-GHINDKNFV  136 (221)
Q Consensus        71 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~----~~~---~~~~~~~~~~~~~---~~---~~~~~-~~~~~v~~~  136 (221)
                      +....-.|.|+....+|+.+++| .||  .+|.+    ..+   +....+  ....+   ..   .-.+. .+..+|..+
T Consensus       174 i~~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Ki--clt~s~ls~lvPs~~~~~~~~~dpI~qi  248 (1311)
T KOG1900|consen  174 ISVDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAEDGWFGSRCRKI--CLTKSVLSSLVPSLLSVPGSSKDPIRQI  248 (1311)
T ss_pred             eecCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccCchhhcccccc--cCchhHHHHhhhhhhcCCCCCCCcceee
Confidence            22224467888877788776666 455  45543    111   000000  00000   00   11222 556789999


Q ss_pred             EEecCCCEEEEecCCCeEEEEEcCCCC
Q psy10662        137 GLATDGDYVACGSENNSLYIYYKGLSK  163 (221)
Q Consensus       137 ~~~~~~~~l~~~~~d~~i~~~d~~~~~  163 (221)
                      +.....+.+.+-++.|.|.+||+....
T Consensus       249 ~ID~SR~IlY~lsek~~v~~Y~i~~~G  275 (1311)
T KOG1900|consen  249 TIDNSRNILYVLSEKGTVSAYDIGGNG  275 (1311)
T ss_pred             EeccccceeeeeccCceEEEEEccCCC
Confidence            999988999999999999999998743

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=92.48  E-value=4.6  Score=32.24  Aligned_cols=101  Identities=17%  Similarity=0.140  Sum_probs=56.3

Q ss_pred             CCceEEEEeCCCeEEEEEecCCce-eeEEEEec-cCceEEEEEecCC--cEEEecC--CCcEEEEEcCCCccceeeeccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKE-ALAVFKGH-RKAVSYVKFLNKE--DIVSAST--DSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~-~~~~~~~~-~~~i~~~~~~~~~--~l~s~~~--d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      ++..++.+..+|.+....+...+. .....-+. .....++.+..++  .++.|+.  |+.+..|.....+.+..+. .-
T Consensus       221 ~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~-N~  299 (504)
T PF10433_consen  221 DGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLP-NW  299 (504)
T ss_dssp             TSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE----
T ss_pred             CCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEecc-Cc
Confidence            456788889999999888874332 11222223 5566788888777  8888877  4455555544444444443 34


Q ss_pred             cceeEEEEeCC----CC------EEEEec---CCCeEEEEE
Q psy10662         76 NDKNFVGLATD----GD------YVACGS---ENNSLYIYY  103 (221)
Q Consensus        76 ~~v~~~~~~~~----~~------~l~~~~---~d~~v~iwd  103 (221)
                      ++|..+++.+.    ..      .+++++   .+|.+++..
T Consensus       300 ~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr  340 (504)
T PF10433_consen  300 GPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILR  340 (504)
T ss_dssp             -SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEE
T ss_pred             CCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEe
Confidence            67888877532    11      344332   467787763

...

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=92.33  E-value=4.2  Score=31.39  Aligned_cols=147  Identities=16%  Similarity=0.167  Sum_probs=73.1

Q ss_pred             EEecCCcEEEecCCCcEEE-EEcCCCcc--ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeE--EEEe
Q psy10662         41 KFLNKEDIVSASTDSQLKL-WNINKPNC--LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH--AYRF  115 (221)
Q Consensus        41 ~~~~~~~l~s~~~d~~v~~-wd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~  115 (221)
                      ..++++.++..+..|.+.. ||  .++.  ...-......+..+.+.+++..++++ ..|.+. +....++.-.  .+  
T Consensus       245 ~~~~dG~~~~vg~~G~~~~s~d--~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G~~~~~~~f--  318 (398)
T PLN00033        245 NRSPDGDYVAVSSRGNFYLTWE--PGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLY-VSKGTGLTEEDFDF--  318 (398)
T ss_pred             EEcCCCCEEEEECCccEEEecC--CCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEE-EecCCCCcccccce--
Confidence            3345555555555554432 33  2221  11112234568899999998877665 555543 3333332110  11  


Q ss_pred             ecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE
Q psy10662        116 DTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW  195 (221)
Q Consensus       116 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  195 (221)
                      ..      .........+..+.|.+++..+++ +..|.+..-. ..++.            +........-....+.+.|
T Consensus       319 ~~------~~~~~~~~~l~~v~~~~d~~~~a~-G~~G~v~~s~-D~G~t------------W~~~~~~~~~~~~ly~v~f  378 (398)
T PLN00033        319 EE------ADIKSRGFGILDVGYRSKKEAWAA-GGSGILLRST-DGGKS------------WKRDKGADNIAANLYSVKF  378 (398)
T ss_pred             ee------cccCCCCcceEEEEEcCCCcEEEE-ECCCcEEEeC-CCCcc------------eeEccccCCCCcceeEEEE
Confidence            00      000111234788889888776554 4567665542 22221            1111111122345778999


Q ss_pred             cCCCcEEEEecCCCeEEEE
Q psy10662        196 RQLSRVLVAANSQGIIKIY  214 (221)
Q Consensus       196 ~~~~~~l~~~~~dg~i~iw  214 (221)
                      .++++.+++| .+|.|.-|
T Consensus       379 ~~~~~g~~~G-~~G~il~~  396 (398)
T PLN00033        379 FDDKKGFVLG-NDGVLLRY  396 (398)
T ss_pred             cCCCceEEEe-CCcEEEEe
Confidence            8777766665 67877655

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=92.30  E-value=4  Score=31.08  Aligned_cols=107  Identities=15%  Similarity=0.039  Sum_probs=63.9

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEec--cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccc-cceeEE
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGH--RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHI-NDKNFV   81 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~~~   81 (221)
                      .+.++..+|.|.-.|.+ +++.+.....-  ...+..-.+..++.++.++.++.+..+|.++++.+-...... -.+..-
T Consensus        70 ~v~~~~~~G~i~A~d~~-~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~  148 (370)
T COG1520          70 TVYVGTRDGNIFALNPD-TGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASP  148 (370)
T ss_pred             eEEEecCCCcEEEEeCC-CCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEecC
Confidence            34455678877777777 45444322211  112222222336779999999999999998888877665443 111111


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEE
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  113 (221)
                      ..-.++ .+..++.++.+...|..+++.....
T Consensus       149 ~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~  179 (370)
T COG1520         149 PVVGDG-TVYVGTDDGHLYALNADTGTLKWTY  179 (370)
T ss_pred             cEEcCc-EEEEecCCCeEEEEEccCCcEEEEE
Confidence            222233 3444447788888888888887665

>PRK10115 protease 2; Provisional

Probab=92.06  E-value=6.4  Score=32.91  Aligned_cols=110  Identities=7%  Similarity=-0.051  Sum_probs=0.0

Q ss_pred             eeEEEEeCCCCEEEEecCCC-----eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         78 KNFVGLATDGDYVACGSENN-----SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      +..+.++|++++++.+...+     .+++.|+.+++.+               .......-..++|.+|++.|+....+.
T Consensus       129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l---------------~~~i~~~~~~~~w~~D~~~~~y~~~~~  193 (686)
T PRK10115        129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWY---------------PELLDNVEPSFVWANDSWTFYYVRKHP  193 (686)
T ss_pred             EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCC---------------CccccCcceEEEEeeCCCEEEEEEecC


Q ss_pred             ------eEEEEEcCCC--CceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecC---CCeEEEEECC
Q psy10662        153 ------SLYIYYKGLS--KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANS---QGIIKIYVIP  217 (221)
Q Consensus       153 ------~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~---dg~i~iw~~~  217 (221)
                            .|+.+++.++  +....+.               .......-..+.+ ++++++..+.   ++.+.+++.+
T Consensus       194 ~~~~~~~v~~h~lgt~~~~d~lv~~---------------e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~  255 (686)
T PRK10115        194 VTLLPYQVWRHTIGTPASQDELVYE---------------EKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE  255 (686)
T ss_pred             CCCCCCEEEEEECCCChhHCeEEEe---------------eCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=91.69  E-value=5.2  Score=31.08  Aligned_cols=143  Identities=12%  Similarity=0.109  Sum_probs=0.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc----eeeEEEEeccCceEEEEEec-----CCcEEEecCCCcEEEEEcCCCccc---
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK----EALAVFKGHRKAVSYVKFLN-----KEDIVSASTDSQLKLWNINKPNCL---   68 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~~~i~~~~~~~-----~~~l~s~~~d~~v~~wd~~~~~~~---   68 (221)
                      .+...|++|+..|.++||+.....    ..+-..+ -+.+|..++..+     +...++.=.-..+.+|.+......   
T Consensus        35 ~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~-l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~  113 (418)
T PF14727_consen   35 SGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQ-LKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEH  113 (418)
T ss_pred             CCccEEEEeccccEEEEEccCCCCCCCccEEEEEe-cCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCccc


Q ss_pred             ------eeeeccccceeEEEEe-------CCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662         69 ------RSFVGHINDKNFVGLA-------TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF  135 (221)
Q Consensus        69 ------~~~~~~~~~v~~~~~~-------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  135 (221)
                            ..+..|.-.-.+..+.       ....++..-+.||.+.+|+-+.--....+             .. .--...
T Consensus       114 g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~l-------------p~-~llPgP  179 (418)
T PF14727_consen  114 GNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFL-------------PD-FLLPGP  179 (418)
T ss_pred             CcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEc-------------CC-CCCCcC


Q ss_pred             EEEecCCCEEEEecCCCeEEEEE
Q psy10662        136 VGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus       136 ~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      +.+.|.-..+++++.+..+.-|.
T Consensus       180 l~Y~~~tDsfvt~sss~~l~~Yk  202 (418)
T PF14727_consen  180 LCYCPRTDSFVTASSSWTLECYK  202 (418)
T ss_pred             eEEeecCCEEEEecCceeEEEec

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=91.55  E-value=5.9  Score=31.47  Aligned_cols=154  Identities=10%  Similarity=0.035  Sum_probs=70.6

Q ss_pred             CCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc
Q psy10662         53 TDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND  132 (221)
Q Consensus        53 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (221)
                      ......++|. +|..+..+.........+...++|.+++...  ..+..+|+. |+.+..+.++...          ...
T Consensus       126 ~~~~~~~iD~-~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~----------~~~  191 (477)
T PF05935_consen  126 SSSYTYLIDN-NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGY----------YDF  191 (477)
T ss_dssp             BEEEEEEEET-TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTE----------E-B
T ss_pred             CCceEEEECC-CccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcc----------ccc
Confidence            3556666774 4444444432222222266778888776555  678888874 5555444221100          001


Q ss_pred             eEEEEEecCCCEEEEecC-------------CCeEEEEEcCCCCceeeeeeecccccccc----------ccc--ccccc
Q psy10662        133 KNFVGLATDGDYVACGSE-------------NNSLYIYYKGLSKHMHAYRFDTVRSMLER----------DRN--EDDTN  187 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~----------~~~--~~~~~  187 (221)
                      =..+...|+|++|+.+..             .-.|...| .+++.+..+++...-.....          ...  ....=
T Consensus       192 HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW  270 (477)
T PF05935_consen  192 HHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDW  270 (477)
T ss_dssp             -S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS
T ss_pred             ccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCc
Confidence            123566788888877762             22355566 67776666653321100000          000  00111


Q ss_pred             cceeEEEEcC-CCcEEEEecCCCeEEEEECCcccC
Q psy10662        188 EFVSAVCWRQ-LSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       188 ~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      .-++++.+.+ ++.+|+++-.-..|...|..++++
T Consensus       271 ~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i  305 (477)
T PF05935_consen  271 LHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKI  305 (477)
T ss_dssp             --EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-E
T ss_pred             cccCccEEeCCCCeEEEEcCcceEEEEEECCCCcE
Confidence            2378999999 667777766566787788766653

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=91.18  E-value=1.8  Score=29.95  Aligned_cols=51  Identities=14%  Similarity=0.114  Sum_probs=35.1

Q ss_pred             CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        143 DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      ..|..+...+.|.+|++..........|.+              -+.|..+.+++.|+||+|--.
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T--------------v~~V~~l~y~~~GDYlvTlE~   79 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFST--------------VGRVLQLVYSEAGDYLVTLEE   79 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcc--------------hhheeEEEeccccceEEEEEe
Confidence            344444667789999998555444343332              356889999999999999653

>KOG2247|consensus

Probab=90.81  E-value=0.024  Score=43.44  Aligned_cols=127  Identities=16%  Similarity=0.245  Sum_probs=77.9

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      +.-++.++.+..+..||-.  ++...... -.+....++|..  +..++.+-..+.+.+||+.+...-..-.+....-.-
T Consensus        46 ~~nlavaca~tiv~~YD~a--gq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~sl  122 (615)
T KOG2247|consen   46 GHNLAVACANTIVIYYDKA--GQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSL  122 (615)
T ss_pred             CCceehhhhhhHHHhhhhh--cceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHHH
Confidence            3346666677777777754  33333332 344556777774  233667778899999999654221111111122223


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV  145 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  145 (221)
                      +.|++....++.+-..|.+.|++..+.+.+..             ...|...++++++.+.+..+
T Consensus       123 l~wsKg~~el~ig~~~gn~viynhgtsR~iiv-------------~Gkh~RRgtq~av~lEd~vi  174 (615)
T KOG2247|consen  123 LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIV-------------MGKHQRRGTQIAVTLEDYVI  174 (615)
T ss_pred             HhhccCCccccccccccceEEEeccchhhhhh-------------hcccccceeEEEecccceee
Confidence            67888888888888889999998776544322             12366778888888765433

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=90.75  E-value=6.9  Score=30.79  Aligned_cols=58  Identities=7%  Similarity=-0.068  Sum_probs=38.6

Q ss_pred             EEeccCceEEEEEecCCcEEEecC-CCcEEEEEcCCCcc--ceeee-----ccccceeEEEEeCCC
Q psy10662         30 FKGHRKAVSYVKFLNKEDIVSAST-DSQLKLWNINKPNC--LRSFV-----GHINDKNFVGLATDG   87 (221)
Q Consensus        30 ~~~~~~~i~~~~~~~~~~l~s~~~-d~~v~~wd~~~~~~--~~~~~-----~~~~~v~~~~~~~~~   87 (221)
                      +...-...+.|+|.|++.++.+-. .|.|++++..++..  +..+.     ........++++|+-
T Consensus        25 va~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        25 LLSGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF   90 (454)
T ss_pred             EECCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence            333445678999999888777776 59999998654422  11111     124567899999874

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>KOG2247|consensus

Probab=90.71  E-value=0.032  Score=42.76  Aligned_cols=134  Identities=9%  Similarity=0.177  Sum_probs=84.9

Q ss_pred             EEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEee
Q psy10662         39 YVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFD  116 (221)
Q Consensus        39 ~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~  116 (221)
                      ...|-+ +..++.++.+..+..||-. ++.+.... .++....++|..+++.+ +.+-..+.+.+||+.+......    
T Consensus        39 ~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqL----  112 (615)
T KOG2247|consen   39 IHRWRPEGHNLAVACANTIVIYYDKA-GQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQL----  112 (615)
T ss_pred             eeeEecCCCceehhhhhhHHHhhhhh-cceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHH----
Confidence            334555 5558889999999999953 33333332 34456678888887754 4556678899999875432110    


Q ss_pred             cccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc
Q psy10662        117 TVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR  196 (221)
Q Consensus       117 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  196 (221)
                              . .+....-.-+.|++....++.+...|.+.+++-.+.......               ..|...+.++++.
T Consensus       113 --------E-~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~---------------Gkh~RRgtq~av~  168 (615)
T KOG2247|consen  113 --------E-SGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVM---------------GKHQRRGTQIAVT  168 (615)
T ss_pred             --------h-ccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhh---------------cccccceeEEEec
Confidence                    0 011111112678888888999999999999986654432111               1267778888888


Q ss_pred             CCCcEE
Q psy10662        197 QLSRVL  202 (221)
Q Consensus       197 ~~~~~l  202 (221)
                      +.+..+
T Consensus       169 lEd~vi  174 (615)
T KOG2247|consen  169 LEDYVI  174 (615)
T ss_pred             ccceee
Confidence            876543

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=90.44  E-value=5.9  Score=29.50  Aligned_cols=66  Identities=15%  Similarity=0.215  Sum_probs=33.1

Q ss_pred             ecCCcEEEecC-----CCcEEEEEcCCCccce--eeeccccceeEEEEeCCCCEEEEecCCC----eEEEEECCCCee
Q psy10662         43 LNKEDIVSAST-----DSQLKLWNINKPNCLR--SFVGHINDKNFVGLATDGDYVACGSENN----SLYIYYKGLSKH  109 (221)
Q Consensus        43 ~~~~~l~s~~~-----d~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~  109 (221)
                      ..+..++.|+.     ...+..||+.+.+-..  .+... ..........++++.+.|+.++    .+.+||+++.+.
T Consensus       122 ~~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W  198 (323)
T TIGR03548       122 KDGTLYVGGGNRNGKPSNKSYLFNLETQEWFELPDFPGE-PRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW  198 (323)
T ss_pred             ECCEEEEEeCcCCCccCceEEEEcCCCCCeeECCCCCCC-CCCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence            34555566654     2357888887654322  11111 1112222233566777777653    245677766543

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>KOG1983|consensus

Probab=90.30  E-value=12  Score=32.85  Aligned_cols=25  Identities=8%  Similarity=0.113  Sum_probs=23.2

Q ss_pred             cCCCcEEEEecCCCeEEEEECCccc
Q psy10662        196 RQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       196 ~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++++..++++-.||.+.+||+..++
T Consensus       243 ~~~~~~~v~~h~Dgs~~fWd~s~g~  267 (993)
T KOG1983|consen  243 SRDGSHFVSYHTDGSYAFWDVSSGK  267 (993)
T ss_pred             ccCCceEEEEEecCCEEeeecCCCc
Confidence            7889999999999999999999875

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=90.17  E-value=7.2  Score=30.14  Aligned_cols=110  Identities=9%  Similarity=-0.077  Sum_probs=61.8

Q ss_pred             cCceEEEEEecCCcEEEecCCCcEEEEEcCCCc-----cceeeec--cccceeEEEEeCCCCEEEEecCCCeEEEEECCC
Q psy10662         34 RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN-----CLRSFVG--HINDKNFVGLATDGDYVACGSENNSLYIYYKGL  106 (221)
Q Consensus        34 ~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~-----~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~  106 (221)
                      ...++++.|.+++.++.++.+|.+..= ...++     .......  ....+..+.|.+++..+++ +..|.+... ...
T Consensus       280 ~~~l~~v~~~~dg~l~l~g~~G~l~~S-~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~-G~~G~v~~s-~D~  356 (398)
T PLN00033        280 ARRIQNMGWRADGGLWLLTRGGGLYVS-KGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAA-GGSGILLRS-TDG  356 (398)
T ss_pred             ccceeeeeEcCCCCEEEEeCCceEEEe-cCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEE-ECCCcEEEe-CCC
Confidence            456889999888887777788876543 33332     1121211  1134788999887765554 467766554 233


Q ss_pred             CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662        107 SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      ++.-...          ..-..-....+.+.|.++++.++ .+.+|.|.-|
T Consensus       357 G~tW~~~----------~~~~~~~~~ly~v~f~~~~~g~~-~G~~G~il~~  396 (398)
T PLN00033        357 GKSWKRD----------KGADNIAANLYSVKFFDDKKGFV-LGNDGVLLRY  396 (398)
T ss_pred             CcceeEc----------cccCCCCcceeEEEEcCCCceEE-EeCCcEEEEe
Confidence            3321110          00012234577888877766655 4566766544

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=90.04  E-value=4.8  Score=27.91  Aligned_cols=165  Identities=11%  Similarity=0.115  Sum_probs=86.4

Q ss_pred             EEEEEecCCcEEEecCCCcEEEEEcCC--CccceeeeccccceeEEEEeCCCCEEEEecCC---C---eEEEE---ECC-
Q psy10662         38 SYVKFLNKEDIVSASTDSQLKLWNINK--PNCLRSFVGHINDKNFVGLATDGDYVACGSEN---N---SLYIY---YKG-  105 (221)
Q Consensus        38 ~~~~~~~~~~l~s~~~d~~v~~wd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~---~v~iw---d~~-  105 (221)
                      ..++-...+.|+.+...+.|.+|++.+  .+....+.. -+.|..+.++..|+|+++--++   .   .+++|   ... 
T Consensus        21 ~~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~   99 (215)
T PF14761_consen   21 TAVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQK   99 (215)
T ss_pred             ceeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhc
Confidence            333333435566657788899999983  344455543 3789999999999999986432   2   56666   221 


Q ss_pred             -CCeeeEEEEe----ec-----cc-ceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCc-e---eeee
Q psy10662        106 -LSKHMHAYRF----DT-----VR-SMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKH-M---HAYR  169 (221)
Q Consensus       106 -~~~~~~~~~~----~~-----~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~-~---~~~~  169 (221)
                       ..+++...-.    ..     .. ...+-.+ .....+.+++-.| .|++++ |+ ++.+.+|.+..... .   ..++
T Consensus       100 ~~~~~v~vRiaG~~v~~~~~~~~~~qleiiEl-Pl~~~p~ciaCC~~tG~LlV-g~-~~~l~lf~l~~~~~~~~~~~~lD  176 (215)
T PF14761_consen  100 EENSPVRVRIAGHRVTPSFNESSKDQLEIIEL-PLSEPPLCIACCPVTGNLLV-GC-GNKLVLFTLKYQTIQSEKFSFLD  176 (215)
T ss_pred             ccCCcEEEEEcccccccCCCCccccceEEEEe-cCCCCCCEEEecCCCCCEEE-Ec-CCEEEEEEEEEEEEecccccEEe
Confidence             1222221100    00     00 0111111 2244567777777 555544 44 45788887754332 1   1122


Q ss_pred             eeccccccccccccccc-ccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        170 FDTVRSMLERDRNEDDT-NEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       170 ~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      |..  .      ....| .-....+++.  +.|+|..+ +-.+++..+.
T Consensus       177 Fe~--~------l~~~~~~~~p~~v~ic--~~yiA~~s-~~ev~Vlkl~  214 (215)
T PF14761_consen  177 FER--S------LIDHIDNFKPTQVAIC--EGYIAVMS-DLEVLVLKLE  214 (215)
T ss_pred             chh--h------hhheecCceEEEEEEE--eeEEEEec-CCEEEEEEEe
Confidence            211  0      00111 2224566664  66888876 4467776653

>KOG2109|consensus

Probab=89.93  E-value=2.8  Score=34.02  Aligned_cols=46  Identities=11%  Similarity=0.223  Sum_probs=34.7

Q ss_pred             EEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCC-eEEEE
Q psy10662         57 LKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENN-SLYIY  102 (221)
Q Consensus        57 v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~iw  102 (221)
                      +.+=|+.+...+..++.|..++..++|.+.+..+++++-.| .|.++
T Consensus       297 vivkdf~S~a~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvf  343 (788)
T KOG2109|consen  297 VIVKDFDSFADIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVF  343 (788)
T ss_pred             EEeecccchhhhhheeeecCcccccccccCceEEEEEeeccceeeeE
Confidence            44456666677778889999999999999999888887665 34444

>KOG3522|consensus

Probab=89.55  E-value=5.6  Score=33.38  Aligned_cols=148  Identities=10%  Similarity=0.068  Sum_probs=83.4

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEE---EEeccCceEEEEEecCCcEEEecCCCcEEE--------EEcCCCccceeee
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAV---FKGHRKAVSYVKFLNKEDIVSASTDSQLKL--------WNINKPNCLRSFV   72 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~--------wd~~~~~~~~~~~   72 (221)
                      ..+..|..++.+.++.-..+......   .......+.++.++++ .+..|.-||++-.        ||.+   +-..+.
T Consensus       548 PTic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~-Slgagl~dgt~a~y~rap~gSwd~e---p~~~~~  623 (925)
T KOG3522|consen  548 PTICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSG-SLGAGLIDGTLAVYGRAPSGSWDGE---PNISIP  623 (925)
T ss_pred             CcccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhcccc-ccccCccCCccccccCCCCCCCCCC---Cccccc
Confidence            35677888999999876511111111   1122345666666643 2333444444433        5543   222333


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      ....+|...++..+   ++.++.+|.|.++...+.......          .....|...|+++....++-+++-.+.| 
T Consensus       624 ~g~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~~~l----------eahqee~~~Vthm~~~~~gVwvafasG~-  689 (925)
T KOG3522|consen  624 TGSLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRSWDL----------EAHQEEAHSVTHMLYLDNGVWVAFASGD-  689 (925)
T ss_pred             cCCccccchhhhhc---eeeeecCCceEEEechhccccchh----------HHHHhhcceEEEEEeeCCceEEEEcCCC-
Confidence            34567888888654   566778999999987654333221          1123455678888888777666555444 


Q ss_pred             eEEEEEcCCCCceeeee
Q psy10662        153 SLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~  169 (221)
                      .++.++..+....+.++
T Consensus       690 ~~rlfhtetl~hlqd~n  706 (925)
T KOG3522|consen  690 EERLFHTETLWHLQDSN  706 (925)
T ss_pred             EEEEecccccCCccccc
Confidence            45555666655554443

>KOG1897|consensus

Probab=88.92  E-value=14  Score=31.82  Aligned_cols=133  Identities=16%  Similarity=0.119  Sum_probs=82.7

Q ss_pred             CCeEEEEEecCCceeeEEEEec--cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGH--RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .|.|.||.+.. .+.++....+  ++.+.++.--++..  .++-+..|++|++.+.+.++.-..+..++..+...-.++.
T Consensus       806 ~GRIivfe~~e-~~~L~~v~e~~v~Gav~aL~~fngkl--lA~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gde  882 (1096)
T KOG1897|consen  806 NGRIIVFEFEE-LNSLELVAETVVKGAVYALVEFNGKL--LAGINQSVRLYEWTTERELRIECNISNPIIALDLQVKGDE  882 (1096)
T ss_pred             cceEEEEEEec-CCceeeeeeeeeccceeehhhhCCeE--EEecCcEEEEEEccccceehhhhcccCCeEEEEEEecCcE
Confidence            57888888874 3333333322  34555554444433  3356789999999888777766677888999999989999


Q ss_pred             EEEecCCCeEEEEECCCCe--eeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         90 VACGSENNSLYIYYKGLSK--HMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        90 l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      ++.|.--+.+.+.-.+..+  ....            .-..+....+++.+-.+ ..++.+..+|.+.+-...
T Consensus       883 I~VgDlm~Sitll~y~~~eg~f~ev------------ArD~~p~Wmtaveil~~-d~ylgae~~gNlf~v~~d  942 (1096)
T KOG1897|consen  883 IAVGDLMRSITLLQYKGDEGNFEEV------------ARDYNPNWMTAVEILDD-DTYLGAENSGNLFTVRKD  942 (1096)
T ss_pred             EEEeeccceEEEEEEeccCCceEEe------------ehhhCccceeeEEEecC-ceEEeecccccEEEEEec
Confidence            9999887777665433222  1110            11234455666666544 445556677777776544

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=88.63  E-value=14  Score=31.37  Aligned_cols=82  Identities=13%  Similarity=0.009  Sum_probs=53.1

Q ss_pred             eCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeee----eeec-ccccccccccccccccceeEEEEcCCCcEEEE
Q psy10662        130 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY----RFDT-VRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA  204 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  204 (221)
                      ...|.++....-+.+++..-.||.|.++|..+-+.+...    .... .......-..+ .....+..++|||.+..++.
T Consensus       259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~f-p~~~~~~~vafSPt~c~~v~  337 (753)
T PF11635_consen  259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHF-PCIQPPLHVAFSPTMCSLVQ  337 (753)
T ss_pred             CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCcccccccccccccc-ccCCCCceEEECcccceEEE
Confidence            345677777777789999999999999998887665544    1110 00010000011 11124556899999999999


Q ss_pred             ecCCCeEE
Q psy10662        205 ANSQGIIK  212 (221)
Q Consensus       205 ~~~dg~i~  212 (221)
                      -..+|.+.
T Consensus       338 ~~~~~~~~  345 (753)
T PF11635_consen  338 IDEDGKTK  345 (753)
T ss_pred             EecCCCce
Confidence            98888855

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=88.57  E-value=9.4  Score=29.24  Aligned_cols=88  Identities=11%  Similarity=0.035  Sum_probs=41.0

Q ss_pred             CCCceEEE-EeCCC--eEEEEEecCCceeeEEEEecc-CceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662          1 MNSCHLAF-GSADH--CVHYYDLRNTKEALAVFKGHR-KAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         1 ~~~~~l~~-~~~dg--~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      +||+.|+. +..||  .+.+.|+. +++ +..+.... ........++ +..++-...+..|+-.|+++.+....+....
T Consensus        45 ~dG~kllF~s~~dg~~nly~lDL~-t~~-i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~  122 (386)
T PF14583_consen   45 DDGRKLLFASDFDGNRNLYLLDLA-TGE-ITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPD  122 (386)
T ss_dssp             TTS-EEEEEE-TTSS-EEEEEETT-T-E-EEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--T
T ss_pred             CCCCEEEEEeccCCCcceEEEEcc-cCE-EEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCc
Confidence            36655554 44455  55556665 444 34444333 2222344455 4445555556788888998887655555455


Q ss_pred             cceeEEEEe--CCCCEE
Q psy10662         76 NDKNFVGLA--TDGDYV   90 (221)
Q Consensus        76 ~~v~~~~~~--~~~~~l   90 (221)
                      ..+-...|.  .++..+
T Consensus       123 ~~~g~gt~v~n~d~t~~  139 (386)
T PF14583_consen  123 DWKGYGTWVANSDCTKL  139 (386)
T ss_dssp             TEEEEEEEEE-TTSSEE
T ss_pred             ccccccceeeCCCccEE
Confidence            555445553  344443

>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]

Probab=87.94  E-value=8.2  Score=32.92  Aligned_cols=159  Identities=14%  Similarity=0.125  Sum_probs=82.3

Q ss_pred             cCCCcEEEEEcCCCccceeeeccccceeEEEE-eCCCC--------EEEEecCCCeEEEEECCCCeeeEEEE-eecccce
Q psy10662         52 STDSQLKLWNINKPNCLRSFVGHINDKNFVGL-ATDGD--------YVACGSENNSLYIYYKGLSKHMHAYR-FDTVRSM  121 (221)
Q Consensus        52 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~~--------~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~  121 (221)
                      +.|+.+.+|+..++...+.+......|..+.. -|..+        +++.+ ....+.++-+...+...++. +++.-  
T Consensus        99 T~dnkLiLWnynn~neyq~idd~shtIlkVkLvrPkantFvs~i~hlL~vA-T~~e~~ilgvs~d~~T~Els~fnTgl--  175 (1263)
T COG5308          99 TNDNKLILWNYNNSNEYQEIDDFSHTILKVKLVRPKANTFVSRISHLLFVA-TEKEVMILGVSKDTKTGELSLFNTGL--  175 (1263)
T ss_pred             EcCCEEEEEecCCCcchhhhhhhhhheeEEEEeccCCcccHHhhhhhhhhh-hhheeeEEEEEeccccceeEEEecce--
Confidence            56889999999987776666554555554443 33322        12222 22234444222111111110 00000  


Q ss_pred             eEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee-----eeccc----ccccccccccccccceeE
Q psy10662        122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-----FDTVR----SMLERDRNEDDTNEFVSA  192 (221)
Q Consensus       122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~v~~  192 (221)
                         ...-..-.|.++.-+.+|+.+.+|-.|  +.+|.+.-.....-+.     ....+    ..+.......-|...|..
T Consensus       176 ---~vsvqGinV~civs~e~GrIFf~g~~d--~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Q  250 (1263)
T COG5308         176 ---VVSVQGINVRCIVSEEDGRIFFGGEND--PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQ  250 (1263)
T ss_pred             ---EEeccCceeEEEEeccCCcEEEecCCC--CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhh
Confidence               011122356777777789999988777  6777654221110000     00000    111111122345577888


Q ss_pred             EEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        193 VCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       193 ~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++.......|.+-+.-..|+-|.+..
T Consensus       251 l~vDqsRg~ly~Lr~kS~Vray~itk  276 (1263)
T COG5308         251 LAVDQSRGLLYVLRKKSAVRAYSITK  276 (1263)
T ss_pred             eeecccccceeeecccceeeeEeeec
Confidence            99988888888888888888888754

>smart00564 PQQ beta-propeller repeat

Probab=87.43  E-value=1.7  Score=19.49  Aligned_cols=24  Identities=21%  Similarity=0.273  Sum_probs=19.8

Q ss_pred             EEEEecCCCeEEEEECCCCeeeEE
Q psy10662         89 YVACGSENNSLYIYYKGLSKHMHA  112 (221)
Q Consensus        89 ~l~~~~~d~~v~iwd~~~~~~~~~  112 (221)
                      .++.++.++.+..+|.++++.+..
T Consensus         8 ~v~~~~~~g~l~a~d~~~G~~~W~   31 (33)
T smart00564        8 TVYVGSTDGTLYALDAKTGEILWT   31 (33)
T ss_pred             EEEEEcCCCEEEEEEcccCcEEEE
Confidence            577788899999999988887654

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PLN02153 epithiospecifier protein

Probab=87.24  E-value=11  Score=28.41  Aligned_cols=23  Identities=13%  Similarity=0.151  Sum_probs=14.2

Q ss_pred             cCCcEEEecCC-----CcEEEEEcCCCc
Q psy10662         44 NKEDIVSASTD-----SQLKLWNINKPN   66 (221)
Q Consensus        44 ~~~~l~s~~~d-----~~v~~wd~~~~~   66 (221)
                      .+..++.|+.+     ..+.+||..+.+
T Consensus        85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~  112 (341)
T PLN02153         85 GTKLYIFGGRDEKREFSDFYSYDTVKNE  112 (341)
T ss_pred             CCEEEEECCCCCCCccCcEEEEECCCCE
Confidence            45556666653     347788887653

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=87.11  E-value=1.7  Score=19.00  Aligned_cols=25  Identities=12%  Similarity=0.215  Sum_probs=20.3

Q ss_pred             eeEEEEcCCCcEEEEecCCCeEEEE
Q psy10662        190 VSAVCWRQLSRVLVAANSQGIIKIY  214 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~dg~i~iw  214 (221)
                      ...++.+++|+++++=+....|.++
T Consensus         4 P~gvav~~~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    4 PHGVAVDSDGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred             CcEEEEeCCCCEEEEECCCCEEEEC
Confidence            4678888999998888888888764

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=87.07  E-value=9.9  Score=27.83  Aligned_cols=55  Identities=13%  Similarity=0.112  Sum_probs=38.2

Q ss_pred             CcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec------CCCeEEEEECCCCee
Q psy10662         55 SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS------ENNSLYIYYKGLSKH  109 (221)
Q Consensus        55 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~  109 (221)
                      ..|++||..+.+-..--.+-.+.|+.+.|..+.++++.|.      ....+..||..+...
T Consensus        16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w   76 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW   76 (281)
T ss_pred             CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee
Confidence            4589999877665544444567899999986666666663      345677888776543

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=86.82  E-value=8.4  Score=26.77  Aligned_cols=131  Identities=8%  Similarity=0.044  Sum_probs=71.3

Q ss_pred             eEEEEEecCCcEEEecC--CCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEE
Q psy10662         37 VSYVKFLNKEDIVSAST--DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        37 i~~~~~~~~~~l~s~~~--d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~  113 (221)
                      -..+.+..+..+.+.+.  ...|++||+++++.+.+..-....+..--...-++++ .-.-.+|.-..+|.++-+.+..+
T Consensus        48 TQGL~~~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~  127 (262)
T COG3823          48 TQGLEYLDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRF  127 (262)
T ss_pred             hcceeeeCCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccc
Confidence            34555555545666665  3469999999998876553221222211111123333 23346777788888877776654


Q ss_pred             EeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662        114 RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE  183 (221)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
                      .+              .+.-..++  .|++-|+.++...+++.-|..+-.....+.....+.....+..+
T Consensus       128 ~y--------------~GeGWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNEL  181 (262)
T COG3823         128 SY--------------EGEGWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNEL  181 (262)
T ss_pred             cc--------------CCcceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccce
Confidence            21              22233333  34555666666667777777666655555544444443333333

>PLN02193 nitrile-specifier protein

Probab=86.23  E-value=15  Score=29.15  Aligned_cols=65  Identities=9%  Similarity=-0.031  Sum_probs=31.8

Q ss_pred             cCCcEEEecCC-----CcEEEEEcCCCccceeee----ccccceeEEEEeCCCCEEEEecCCC-----eEEEEECCCCee
Q psy10662         44 NKEDIVSASTD-----SQLKLWNINKPNCLRSFV----GHINDKNFVGLATDGDYVACGSENN-----SLYIYYKGLSKH  109 (221)
Q Consensus        44 ~~~~l~s~~~d-----~~v~~wd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~  109 (221)
                      .+..++.|+.+     ..+..||+.+.+-...-.    .....-.++.. -++++++.|+.++     .+..||+.+.+.
T Consensus       228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W  306 (470)
T PLN02193        228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKW  306 (470)
T ss_pred             CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCEE
Confidence            44556666654     357788887654322111    01111122222 2455666666543     456777766543

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=85.68  E-value=21  Score=30.40  Aligned_cols=84  Identities=12%  Similarity=0.096  Sum_probs=50.5

Q ss_pred             ceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCce--eeeeeeccccccccc-ccccccccceeEEEEcCCCcEEEEecC
Q psy10662        132 DKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHM--HAYRFDTVRSMLERD-RNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       132 ~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      +...++|+| +.+.||+....|...||++......  ..+...  ......+ .....+ ..-..+.|.++...|+.++ 
T Consensus       147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~--~~~~gsi~~d~~e~-s~w~rI~W~~~~~~lLv~~-  222 (765)
T PF10214_consen  147 PHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLS--RNISGSIIFDPEEL-SNWKRILWVSDSNRLLVCN-  222 (765)
T ss_pred             ccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeec--cCCCccccCCCccc-CcceeeEecCCCCEEEEEc-
Confidence            556789998 4568999999999999999221111  111111  0010111 111112 2345789988877787775 


Q ss_pred             CCeEEEEECCcc
Q psy10662        208 QGIIKIYVIPIR  219 (221)
Q Consensus       208 dg~i~iw~~~~~  219 (221)
                      ...+.++|+++.
T Consensus       223 r~~l~~~d~~~~  234 (765)
T PF10214_consen  223 RSKLMLIDFESN  234 (765)
T ss_pred             CCceEEEECCCC
Confidence            456888888765

These proteins are found in fungi.

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=85.39  E-value=12  Score=27.35  Aligned_cols=95  Identities=14%  Similarity=0.190  Sum_probs=53.4

Q ss_pred             CeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEec-------CCCcEEEEEcCCCccceeeec-----cccceeE
Q psy10662         13 HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAS-------TDSQLKLWNINKPNCLRSFVG-----HINDKNF   80 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~-------~d~~v~~wd~~~~~~~~~~~~-----~~~~v~~   80 (221)
                      ..|++||.. ..+=...-.+-.+.|++|.|..++.|+.++       ....+..||..+.... .+..     -.++|..
T Consensus        16 ~~lC~yd~~-~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~-~~~~~~s~~ipgpv~a   93 (281)
T PF12768_consen   16 PGLCLYDTD-NSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWS-SLGGGSSNSIPGPVTA   93 (281)
T ss_pred             CEEEEEECC-CCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeee-ecCCcccccCCCcEEE
Confidence            469999987 332111112345679999998655544433       3556888998766432 2222     2467888


Q ss_pred             EEEeC-CCC-EEEEec---CCCeEEEEECCCCee
Q psy10662         81 VGLAT-DGD-YVACGS---ENNSLYIYYKGLSKH  109 (221)
Q Consensus        81 ~~~~~-~~~-~l~~~~---~d~~v~iwd~~~~~~  109 (221)
                      +.+.. ++. ..+.|.   .+..|..||=.+...
T Consensus        94 ~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~  127 (281)
T PF12768_consen   94 LTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSS  127 (281)
T ss_pred             EEeeccCCceEEEeceecCCCceEEEEcCCceEe
Confidence            77743 333 343433   234577776544433

>PF01011 PQQ: PQQ enzyme repeat family

Probab=85.13  E-value=2.8  Score=19.79  Aligned_cols=26  Identities=19%  Similarity=0.295  Sum_probs=21.7

Q ss_pred             EEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662         89 YVACGSENNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        89 ~l~~~~~d~~v~iwd~~~~~~~~~~~  114 (221)
                      .++.++.+|.+.-.|.++++.+..++
T Consensus         2 ~v~~~~~~g~l~AlD~~TG~~~W~~~   27 (38)
T PF01011_consen    2 RVYVGTPDGYLYALDAKTGKVLWKFQ   27 (38)
T ss_dssp             EEEEETTTSEEEEEETTTTSEEEEEE
T ss_pred             EEEEeCCCCEEEEEECCCCCEEEeee
Confidence            35566899999999999999987764

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=85.10  E-value=14  Score=27.79  Aligned_cols=13  Identities=15%  Similarity=0.110  Sum_probs=8.9

Q ss_pred             cCCCcEEEEecCC
Q psy10662        196 RQLSRVLVAANSQ  208 (221)
Q Consensus       196 ~~~~~~l~~~~~d  208 (221)
                      .-++++++.|+.+
T Consensus       319 ~~~~~iyv~GG~~  331 (346)
T TIGR03547       319 SWNNGVLLIGGEN  331 (346)
T ss_pred             EcCCEEEEEeccC
Confidence            3467888888754

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=84.64  E-value=8.1  Score=24.62  Aligned_cols=79  Identities=13%  Similarity=0.144  Sum_probs=45.5

Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-----CCCEEEEecCCCeE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-----DGDYVACGSENNSL  154 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i  154 (221)
                      .-.|......|++++.-|+|.|++..........     .... ..+..-...|++++-.|     ....|+.|+. ..+
T Consensus         3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~-----~~~~-i~~LNin~~italaaG~l~~~~~~D~LliGt~-t~l   75 (136)
T PF14781_consen    3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGR-----QDSD-ISFLNINQEITALAAGRLKPDDGRDCLLIGTQ-TSL   75 (136)
T ss_pred             EEEeCCCceeEEEEecCCEEEEECCCcccccccc-----ccCc-eeEEECCCceEEEEEEecCCCCCcCEEEEecc-ceE
Confidence            3456555567888888899999986543321110     0011 11233455677765433     3446666665 468


Q ss_pred             EEEEcCCCCce
Q psy10662        155 YIYYKGLSKHM  165 (221)
Q Consensus       155 ~~~d~~~~~~~  165 (221)
                      ..||......+
T Consensus        76 laYDV~~N~d~   86 (136)
T PF14781_consen   76 LAYDVENNSDL   86 (136)
T ss_pred             EEEEcccCchh
Confidence            89998766544

>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides

Probab=84.40  E-value=3  Score=24.26  Aligned_cols=30  Identities=17%  Similarity=0.186  Sum_probs=24.5

Q ss_pred             ceeEEEEcCCCcEEEEec-CCCeEEEEECCc
Q psy10662        189 FVSAVCWRQLSRVLVAAN-SQGIIKIYVIPI  218 (221)
Q Consensus       189 ~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~  218 (221)
                      ..+.+.++|++++|+.++ ..+.|++|+...
T Consensus        55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~   85 (86)
T PF01731_consen   55 FANGIAISPDKKYLYVASSLAHSIHVYKRHK   85 (86)
T ss_pred             CCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence            357899999999988876 488999998753

The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=83.94  E-value=14  Score=26.91  Aligned_cols=107  Identities=7%  Similarity=-0.015  Sum_probs=59.2

Q ss_pred             ccceeEEEEeCCCCEEEEecCC---------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE
Q psy10662         75 INDKNFVGLATDGDYVACGSEN---------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV  145 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d---------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  145 (221)
                      ........|.+.|.+-+++...         +.|++|+.                       ......+.|+..|+|..-
T Consensus       147 ~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpa-----------------------PqG~gpyGi~atpdGsvw  203 (353)
T COG4257         147 DANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPA-----------------------PQGGGPYGICATPDGSVW  203 (353)
T ss_pred             CCcccceeeCCCccEEEeeccccceecCcccCceeeecc-----------------------CCCCCCcceEECCCCcEE
Confidence            3456778888888887777521         22333332                       122345678888999888


Q ss_pred             EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ++.-.+..|-..|..++... .+.            .-......-+.+--+|.|+.-++-...+.++-+|-.
T Consensus       204 yaslagnaiaridp~~~~ae-v~p------------~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs  262 (353)
T COG4257         204 YASLAGNAIARIDPFAGHAE-VVP------------QPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPS  262 (353)
T ss_pred             EEeccccceEEcccccCCcc-eec------------CCCcccccccccccCccCcEEEeccCCceeeEeCcc
Confidence            87777777777775544221 110            001111122334445666666665556666655543

>TIGR03032 conserved hypothetical protein TIGR03032

Probab=83.87  E-value=16  Score=27.27  Aligned_cols=88  Identities=14%  Similarity=0.070  Sum_probs=50.3

Q ss_pred             EEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCC--------------------CeE
Q psy10662         40 VKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSEN--------------------NSL   99 (221)
Q Consensus        40 ~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------------~~v   99 (221)
                      -.|+.+...++-+..|.+.-+|.++++..... .-.+....++|.  |.+++++...                    .-|
T Consensus       208 PRWhdgrLwvldsgtGev~~vD~~~G~~e~Va-~vpG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv  284 (335)
T TIGR03032       208 PRWYQGKLWLLNSGRGELGYVDPQAGKFQPVA-FLPGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGV  284 (335)
T ss_pred             CcEeCCeEEEEECCCCEEEEEcCCCCcEEEEE-ECCCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccE
Confidence            34444555666677788888887766443322 233456777777  6666554321                    124


Q ss_pred             EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662        100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD  141 (221)
Q Consensus       100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  141 (221)
                      .+.|++++..+..++           +.+.-.++..+++-|.
T Consensus       285 ~vidl~tG~vv~~l~-----------feg~v~EifdV~vLPg  315 (335)
T TIGR03032       285 AVIDLNSGDVVHWLR-----------FEGVIEEIYDVAVLPG  315 (335)
T ss_pred             EEEECCCCCEEEEEE-----------eCCceeEEEEEEEecC
Confidence            556666666665552           3344445666666664

This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=82.50  E-value=17  Score=26.72  Aligned_cols=177  Identities=10%  Similarity=0.054  Sum_probs=90.0

Q ss_pred             eEEEEEecCCceeeEEEEec------cCceEEEEEec--C----Cc-EEEecCCCcEEEEEcCCCccceeeeccccce--
Q psy10662         14 CVHYYDLRNTKEALAVFKGH------RKAVSYVKFLN--K----ED-IVSASTDSQLKLWNINKPNCLRSFVGHINDK--   78 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~------~~~i~~~~~~~--~----~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v--   78 (221)
                      .|.+||+. +.+.++++.-.      .+.+..+.+..  +    ++ +++=+..+-|.|+|+.+++..+.+..+...-  
T Consensus        35 KLv~~Dl~-t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~  113 (287)
T PF03022_consen   35 KLVAFDLK-TNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPD  113 (287)
T ss_dssp             EEEEEETT-TTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-S
T ss_pred             EEEEEECC-CCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceecc
Confidence            67888998 66676666432      34678888873  2    23 4455556789999999887655443221110  


Q ss_pred             ------eEEEEe-CCCCEE-EEe---cCCCeEEEEECCCCeeeEEEEeec---------c-cceeEeeEEEe-eCceEEE
Q psy10662         79 ------NFVGLA-TDGDYV-ACG---SENNSLYIYYKGLSKHMHAYRFDT---------V-RSMLESSFVGH-INDKNFV  136 (221)
Q Consensus        79 ------~~~~~~-~~~~~l-~~~---~~d~~v~iwd~~~~~~~~~~~~~~---------~-~~~~~~~~~~~-~~~v~~~  136 (221)
                            ....|. ++| .+ ++.   +.|+....|..-++..+..+.-..         . .....+.+ +. ......+
T Consensus       114 ~~~~~i~g~~~~~~dg-~~gial~~~~~d~r~LYf~~lss~~ly~v~T~~L~~~~~~~~~~~~~~v~~l-G~k~~~s~g~  191 (287)
T PF03022_consen  114 AGPFTIGGESFQWPDG-IFGIALSPISPDGRWLYFHPLSSRKLYRVPTSVLRDPSLSDAQALASQVQDL-GDKGSQSDGM  191 (287)
T ss_dssp             SEEEEETTEEEEETTS-EEEEEE-TTSTTS-EEEEEETT-SEEEEEEHHHHCSTT--HHH-HHHT-EEE-EE---SECEE
T ss_pred             ccceeccCceEecCCC-ccccccCCCCCCccEEEEEeCCCCcEEEEEHHHhhCccccccccccccceec-cccCCCCceE
Confidence                  001111 112 11 111   224444444444444443332110         0 00111122 22 2356678


Q ss_pred             EEecCCCEEEEecCCCeEEEEEcCCCCce---eeeeeecccccccccccccccccceeEEEEcC--CCcEEEEe
Q psy10662        137 GLATDGDYVACGSENNSLYIYYKGLSKHM---HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ--LSRVLVAA  205 (221)
Q Consensus       137 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~  205 (221)
                      +++++|.++++--..+.|..|+....-..   ..+.-+            ...-.++.++.+.+  +|.+.+..
T Consensus       192 ~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d------------~~~l~~pd~~~i~~~~~g~L~v~s  253 (287)
T PF03022_consen  192 AIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQD------------PRTLQWPDGLKIDPEGDGYLWVLS  253 (287)
T ss_dssp             EEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-------------CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred             EECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEc------------CceeeccceeeeccccCceEEEEE
Confidence            89999999999999999999998753211   111101            01134678889988  77655544

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A

Probab=82.41  E-value=3.7  Score=19.57  Aligned_cols=21  Identities=5%  Similarity=-0.013  Sum_probs=15.9

Q ss_pred             CCcEEEEecCCCeEEEEECCc
Q psy10662        198 LSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       198 ~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+..++.++.||.+..+|.++
T Consensus        20 ~~g~vyv~~~dg~l~ald~~t   40 (40)
T PF13570_consen   20 AGGRVYVGTGDGNLYALDAAT   40 (40)
T ss_dssp             CTSEEEEE-TTSEEEEEETT-
T ss_pred             ECCEEEEEcCCCEEEEEeCCC
Confidence            356788888999999998764

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=82.24  E-value=20  Score=27.43  Aligned_cols=12  Identities=25%  Similarity=0.277  Sum_probs=7.9

Q ss_pred             CCCcEEEEecCC
Q psy10662        197 QLSRVLVAANSQ  208 (221)
Q Consensus       197 ~~~~~l~~~~~d  208 (221)
                      .++++++.|+.+
T Consensus       278 ~~~~iyv~GG~~  289 (376)
T PRK14131        278 SNGVLLVAGGAN  289 (376)
T ss_pred             ECCEEEEeeccC
Confidence            466777777653

>PF14779 BBS1: Ciliary BBSome complex subunit 1

Probab=82.08  E-value=14  Score=26.66  Aligned_cols=55  Identities=16%  Similarity=0.065  Sum_probs=0.0

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe--c-CCc-EEEecCCCcEEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL--N-KED-IVSASTDSQLKL   59 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~~-l~s~~~d~~v~~   59 (221)
                      ..|+.|.++|.|.|.|.. ....+..++-..-++.-.+..  . -++ ++.++.||.|++
T Consensus       196 scLViGTE~~~i~iLd~~-af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~iy~  254 (257)
T PF14779_consen  196 SCLVIGTESGEIYILDPQ-AFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGKIYT  254 (257)
T ss_pred             ceEEEEecCCeEEEECch-hheeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCEEEE

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=81.80  E-value=19  Score=26.71  Aligned_cols=130  Identities=14%  Similarity=0.157  Sum_probs=69.9

Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      ++++...++|++|++.-.-..|.+.|-++++.+..+.-....     .+.-   .-...++-.+-+++-.+..++.|.++
T Consensus       146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~-----df~~---~~~~f~~QHdar~~~~~~~~~~IslF  217 (299)
T PF14269_consen  146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNS-----DFTL---PATNFSWQHDARFLNESNDDGTISLF  217 (299)
T ss_pred             eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCC-----cccc---cCCcEeeccCCEEeccCCCCCEEEEE
Confidence            677777788999999988889999999999888765211000     0000   11123333444455455667778888


Q ss_pred             EcCCC-------Cceeeeeeeccccccccccccccc-----ccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        158 YKGLS-------KHMHAYRFDTVRSMLERDRNEDDT-----NEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       158 d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      |-...       ..-..+.++..............+     ...--++..-|+|+.|++=+..+.+.-++
T Consensus       218 DN~~~~~~~~~~s~~~v~~ld~~~~~~~~~~~~~~~~~~~~s~~~G~~Q~L~nGn~li~~g~~g~~~E~~  287 (299)
T PF14269_consen  218 DNANSDFNGTEPSRGLVLELDPETMTVTLVREYSDHPDGFYSPSQGSAQRLPNGNVLIGWGNNGRISEFT  287 (299)
T ss_pred             cCCCCCCCCCcCCCceEEEEECCCCEEEEEEEeecCCCcccccCCCcceECCCCCEEEecCCCceEEEEC
Confidence            76311       111122222222221111111111     11223455678899888877777655444

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=81.70  E-value=3.4  Score=18.07  Aligned_cols=24  Identities=17%  Similarity=0.337  Sum_probs=18.4

Q ss_pred             ceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662        132 DKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      .|.+++..+  .+++++...+.+++|
T Consensus         3 ~i~aia~g~--~~vavaTS~~~lRif   26 (27)
T PF12341_consen    3 EIEAIAAGD--SWVAVATSAGYLRIF   26 (27)
T ss_pred             eEEEEEccC--CEEEEEeCCCeEEec
Confidence            456666654  489999999999987

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=80.85  E-value=23  Score=27.06  Aligned_cols=103  Identities=13%  Similarity=0.020  Sum_probs=59.8

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe-----cCCcEEEecCCCcEEEEEcCCCccceeeeccc---c
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-----NKEDIVSASTDSQLKLWNINKPNCLRSFVGHI---N   76 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~---~   76 (221)
                      .+..++.+|.++.+|.. +++.+....... .   ..+.     .++.+..++.++.+...|..+++..-......   .
T Consensus       113 ~i~~g~~~g~~y~ld~~-~G~~~W~~~~~~-~---~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~  187 (370)
T COG1520         113 KIYVGSWDGKLYALDAS-TGTLVWSRNVGG-S---PYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSL  187 (370)
T ss_pred             eEEEecccceEEEEECC-CCcEEEEEecCC-C---eEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCcccc
Confidence            36677788877778875 677777766544 1   3332     24556666678999888888887755432211   1


Q ss_pred             ceeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~  113 (221)
                      .+..--...+ ..+..+..  ++.+.-.|..+++.....
T Consensus       188 ~~~~~~~~~~-~~vy~~~~~~~~~~~a~~~~~G~~~w~~  225 (370)
T COG1520         188 SIYGSPAIAS-GTVYVGSDGYDGILYALNAEDGTLKWSQ  225 (370)
T ss_pred             ccccCceeec-ceEEEecCCCcceEEEEEccCCcEeeee
Confidence            1111111122 23444444  556777788777776553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	221
2g99_A	308	Structural Basis For The Specific Recognition Of Me		3e-08
2gnq_A	336	Structure Of Wdr5 Length = 336		3e-08
2h9l_A	329	Wdr5delta23 Length = 329		3e-08
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		3e-08
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		3e-08
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		3e-08
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		3e-08
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		3e-08
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		3e-08
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		3e-08
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		3e-08
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		3e-08
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		3e-08
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		3e-08
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		3e-08
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		5e-08
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		8e-08
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		9e-08
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		9e-07
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		9e-07
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		9e-07
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		9e-07
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		9e-07
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		1e-06
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		7e-04
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		1e-06
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-06
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-06
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		1e-06
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		1e-06
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		3e-06
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		1e-05
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		1e-05
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		2e-05
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-05
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		2e-05
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		2e-05
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		2e-05
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		4e-05
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		6e-05
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		6e-05
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		8e-05
3cfs_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		9e-05
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		1e-04
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		1e-04
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		1e-04
3cfv_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		2e-04
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		2e-04
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		3e-04
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		6e-04
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		7e-04
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		7e-04

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 34  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 92
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 93  GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 152
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 153 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 212
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 213 KLWDYSKGKCLKTY 226

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 62  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 120
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 121 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 180
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 181 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 240
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 241 KLWDYSKGKCLKTY 254

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 55  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 113
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 114 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 173
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 174 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 233
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 234 KLWDYSKGKCLKTY 247

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 60  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 178
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 239 KLWDYSKGKCLKTY 252

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 44  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 102
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 103 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 162
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 163 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 222
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 223 KLWDYSKGKCLKTY 236

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 38  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 97  GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 156
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 157 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 216
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 217 KLWDYSKGKCLKTY 230

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 38  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 97  GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 156
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 157 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 216
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 217 KLWDYSKGKCLKTY 230

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 41  LAASSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 100 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 159
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 160 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 219
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 220 KLWDYSKGKCLKTY 233

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 37  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 95
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 96  GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 155
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 156 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 215
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 216 KLWDYSKGKCLKTY 229

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 39  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 97
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 98  GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 157
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 158 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 217
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 218 KLWDYSKGKCLKTY 231

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 44  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 102
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 103 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 162
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 163 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 222
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 223 KLWDYSKGKCLKTY 236

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 44  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 102
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 103 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 162
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 163 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 222
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 223 KLWDYSKGKCLKTY 236

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 43  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 101
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 102 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 161
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 162 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 221
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 222 KLWDYSKGKCLKTY 235

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 41  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 100 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 159
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 160 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 219
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 220 KLWDYSKGKCLKTY 233

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 41  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY-------YKGLSKH---MHAYR 114
             CL++  GH N           + +  GS + S+ I+        K L  H   + A  
Sbjct: 100 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 159
Query: 115 FDTVRSMLESS----------------FVGHINDKN----FVGLATDGDYVACGSENNSL 154
           F+   S++ SS                    I+D N    FV  + +G Y+   + +N+L
Sbjct: 160 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 219
Query: 155 YIYYKGLSKHMHAY 168
            ++     K +  Y
Sbjct: 220 KLWDYSKGKCLKTY 233

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 41  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
             CL++  GH N           + +  GS + S+ I+             D    M   
Sbjct: 100 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW-------------DVKTGMCLK 146
Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
           +   H +  + V    DG  +   S        Y GL +         +++++      D
Sbjct: 147 TLPAHSDPVSAVHFNRDGSLIVSSS--------YDGLCRIWDTASGQCLKTLI------D 192
Query: 185 DTNEFVSAVCWRQLSRVLVAANSQGIIKIY 214
           D N  VS V +    + ++AA     +K++
Sbjct: 193 DDNPPVSFVKFSPNGKYILAATLDNTLKLW 222

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKF-LNKEDIVSASTDSQLKLWNINK 64
           +A  S D  V  ++ RN  + L    GH  +V  V F  + + I SAS D  +KLWN N 
Sbjct: 154 IASASDDKTVKLWN-RN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG 211
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
              L++  GH +    V  + DG  +A  S++ ++ ++ +                 L  
Sbjct: 212 -QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR--------------NGQLLQ 256
Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159
           +  GH +  N V    DG  +A  S++ ++ ++ +
Sbjct: 257 TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR 291

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINK 64
           LA  SAD  +  +   + K    +  GH+  +S V + +  ++ VSAS D  LK+W+++ 
Sbjct: 41  LASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124
             CL++  GH N           + +  GS + S+ I+             D    M   
Sbjct: 100 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW-------------DVKTGMCLK 146
Query: 125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184
           +   H +  + V    DG  +   S        Y GL +         +++++      D
Sbjct: 147 TLPAHSDPVSAVHFNRDGSLIVSSS--------YDGLCRIWDTASGQCLKTLI------D 192
Query: 185 DTNEFVSAVCWRQLSRVLVAANSQGIIKIY 214
           D N  VS V +    + ++AA     +K++
Sbjct: 193 DDNPPVSFVKFSPNGKYILAATLDNDLKLW 222

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 5   HLAFGSADHCVHYYDLRNTKEALAV---FKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           ++A G  D+    Y+L+  +  + V     GH   +S  +FL+   IV++S D+   LW+
Sbjct: 122 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 181
Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
           I       +F GH  D   + LA D      G+ + S  ++             D    M
Sbjct: 182 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW-------------DVREGM 228
Query: 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV 173
              +F GH +D N +    +G+  A GS++ +  ++     + +  Y  D +
Sbjct: 229 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 280

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 5   HLAFGSADHCVHYYDLRNTKEALAV---FKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           ++A G  D+    Y+L+  +  + V     GH   +S  +FL+   IV++S D+   LW+
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170
Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
           I       +F GH  D   + LA D      G+ + S  ++             D    M
Sbjct: 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW-------------DVREGM 217
Query: 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV 173
              +F GH +D N +    +G+  A GS++ +  ++     + +  Y  D +
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 5   HLAFGSADHCVHYYDLRNTKEALAV---FKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           ++A G  D+    Y+L+  +  + V     GH   +S  +FL+   IV++S D+   LW+
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170
Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
           I       +F GH  D   + LA D      G+ + S  ++             D    M
Sbjct: 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW-------------DVREGM 217
Query: 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV 173
              +F GH +D N +    +G+  A GS++ +  ++     + +  Y  D +
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 5   HLAFGSADHCVHYYDLRNTKEALAV---FKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           ++A G  D+    Y+L+  +  + V     GH   +S  +FL+   IV++S D+   LW+
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170
Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
           I       +F GH  D   + LA D      G+ + S  ++             D    M
Sbjct: 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW-------------DVREGM 217
Query: 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV 173
              +F GH +D N +    +G+  A GS++ +  ++     + +  Y  D +
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 5   HLAFGSADHCVHYYDLRNTKEALAV---FKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
           ++A G  D+    Y+L+  +  + V     GH   +S  +FL+   IV++S D+   LW+
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170
Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
           I       +F GH  D   + LA D      G+ + S  ++             D    M
Sbjct: 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW-------------DVREGM 217
Query: 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV 173
              +F GH +D N +    +G+  A GS++ +  ++     + +  Y  D +
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINK 64
           LA  SAD  +  +D +   E +    GH   VS V  + N + IVSAS D  +K+W +  
Sbjct: 165 LASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 65  PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
             C+++F GH      V    DG  +A  S + ++ ++
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 21  RNTKEALA------VFKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINKPNCLRSFVG 73
           R+ KE +          GHR  V+ V F     + VSAS D+ +K+W+    +  R+  G
Sbjct: 89  RDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 148
Query: 74  HINDKNFVGLATDGDYVACGSENNSLYIY-YKGLSKHMHAYRFDTVRSMLESSFVGHIND 132
           H +    +     G  +A  S + ++ ++ ++G         F+ +R+M      GH ++
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG---------FECIRTMH-----GHDHN 194
Query: 133 KNFVGLATDGDYVACGSENNSLYIY 157
            + V +  +GD++   S + ++ ++
Sbjct: 195 VSSVSIMPNGDHIVSASRDKTIKMW 219

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 9   GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNC 67
            S D  +  +D+  T E    F GH+  V  V    K   I+S S D  +K+W I K  C
Sbjct: 83  ASWDKTLRLWDVA-TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI-KGQC 140
Query: 68  LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV 127
           L + +GH +  + V +  +       ++++S+ I   G  K + A+  +  +  +E+ F+
Sbjct: 141 LATLLGHNDWVSQVRVVPNEK-----ADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFI 193
Query: 128 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH 166
           GH ++ N +  + DG  +A   ++  + ++     K M+
Sbjct: 194 GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 10  SADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCL 68
           S D  +  +D+  T E    F GH+  V  V    K   I+S S D  +K+W I K  CL
Sbjct: 84  SWDKTLRLWDVA-TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI-KGQCL 141
Query: 69  RSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG 128
            + +GH +  + V +  +       ++++S+ I   G  K + A+  +  +  +E+ F+G
Sbjct: 142 ATLLGHNDWVSQVRVVPNEK-----ADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFIG 194
Query: 129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH 166
           H ++ N +  + DG  +A   ++  + ++     K M+
Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 10  SADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCL 68
           S D  +  +D+  T E    F GH+  V  V    K   I+S S D  +K+W I K  CL
Sbjct: 84  SWDKTLRLWDVA-TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI-KGQCL 141
Query: 69  RSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG 128
            + +GH +  + V +  +       ++++S+ I   G  K + A+  +  +  +E+ F+G
Sbjct: 142 ATLLGHNDWVSQVRVVPNEK-----ADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFIG 194
Query: 129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH 166
           H ++ N +  + DG  +A   ++  + ++     K M+
Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 9   GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNC 67
            S D  +  +D+  T E    F GH+  V  V    K   I+S S D  +K+W I K  C
Sbjct: 77  ASWDKTLRLWDVA-TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI-KGQC 134
Query: 68  LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV 127
           L + +GH +  + V +  +       ++++S+ I   G  K + A+  +  +  +E+ F+
Sbjct: 135 LATLLGHNDWVSQVRVVPNEK-----ADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFI 187
Query: 128 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH 166
           GH ++ N +  + DG  +A   ++  + ++     K M+
Sbjct: 188 GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 226

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 9   GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNC 67
            S D  +  +D+  T E    F GH+  V  V    K   I+S S D  +K+W I K  C
Sbjct: 83  ASWDKTLRLWDVA-TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI-KGQC 140
Query: 68  LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV 127
           L + +GH +  + V +  +       ++++S+ I   G  K + A+  +  +  +E+ F+
Sbjct: 141 LATLLGHNDWVSQVRVVPNEK-----ADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFI 193
Query: 128 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH 166
           GH ++ N +  + DG  +A   ++  + ++     K M+
Sbjct: 194 GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 9   GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNC 67
            S D  +  +D+  T E    F GH+  V  V    K   I+S S D  +K+W I K  C
Sbjct: 83  ASWDKTLRLWDVA-TGETYQRFVGHKSDVXSVDIDKKASXIISGSRDKTIKVWTI-KGQC 140
Query: 68  LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV 127
           L + +GH +  + V +  +       ++++S+ I   G  K + A+  +  +  +E+ F+
Sbjct: 141 LATLLGHNDWVSQVRVVPNEK-----ADDDSVTIISAGNDKXVKAWNLNQFQ--IEADFI 193
Query: 128 GHINDKNFVGLATDGDYVACGSENNSLYIY 157
           GH ++ N +  + DG  +A   ++  + ++
Sbjct: 194 GHNSNINTLTASPDGTLIASAGKDGEIXLW 223

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED---IVSASTDSQLKLWNI 62
            A G  D  V  + L  +     +  G  + V+YV +    D   +++AS D  +K+W+ 
Sbjct: 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215
Query: 63  NKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
              +C+ +  GH+++ +F         +  GSE+ +L I+
Sbjct: 216 QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED---IVSASTDSQLKLWNI 62
            A G  D  V  + L  +     +  G  + V+YV +    D   +++AS D  +K+W+ 
Sbjct: 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215
Query: 63  NKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
              +C+ +  GH+++ +F         +  GSE+ +L I+
Sbjct: 216 QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED---IVSASTDSQLK 58
           +    A G  D  V  + L  +     +  G  + V+YV +    D   +++AS D  +K
Sbjct: 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211
Query: 59  LWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
           +W+    +C+ +  GH+++ +F         +  GSE+ +L I+
Sbjct: 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 30  FKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD 88
            +GH   VS V   N  +  VSAS D  L+LWN+    C   F+GH  D   V  + D  
Sbjct: 63  LEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNR 122
Query: 89  YVACGSENNSLYIY-YKG-----LSKHMHAYRFDTVR 119
            +  G  +N+L ++  KG     LS+  H      VR
Sbjct: 123 QIVSGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVR 159

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 9   GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL 68
           G+ D  +  YD  N K+ L    GH   V  +K+ +   +VS STD  +++W+I K  C 
Sbjct: 138 GADDKMIRVYDSIN-KKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCT 196
Query: 69  RSFVGHINDKNFVGLAT--DGDYVACGSENNSLYIY----YKGLSKHMHAYRFDTVRSML 122
             F GH +    + +    +  Y+  GS +N+L+++       +  H   + +  V    
Sbjct: 197 HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP 256
Query: 123 ESS--FVGHIND--KNFVGLATDGDYVACGSENNSLYIY 157
           E +  FVG +     +   ++  G+ V  GS +N+L ++
Sbjct: 257 EENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVW 295

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED---IVSASTDSQLK 58
           +    A G  D  V  + L  +     +  G  + V+YV +    D   +++AS D  +K
Sbjct: 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211
Query: 59  LWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
           +W+    +C+ +  GH+++ +F         +  GSE+ +L I+
Sbjct: 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 9   GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL 68
           G+ D  +  YD  N K+ L    GH   V  +K+ +   +VS STD  +++W+I K  C 
Sbjct: 138 GADDKXIRVYDSIN-KKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCT 196
Query: 69  RSFVGHINDKNFVGLA--TDGDYVACGSENNSLYIY----YKGLSKHMHAYRFDTVRSML 122
             F GH +    + +    +  Y+  GS +N+L+++       +  H   + +  V    
Sbjct: 197 HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP 256
Query: 123 ESS--FVGHI--NDKNFVGLATDGDYVACGSENNSLYIY 157
           E +  FVG +  +  +   ++  G+ V  GS +N+L ++
Sbjct: 257 EENPYFVGVLRGHXASVRTVSGHGNIVVSGSYDNTLIVW 295

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 86/215 (40%), Gaps = 30/215 (13%)
Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALA-VFKGHRKAVSYVKFLNKEDIV-SASTDSQLKL 59
           NS  +  GS D  V  +  R+ +  L    +GH+  V  V   +   I  S+S D+ ++L
Sbjct: 47  NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 106
Query: 60  WNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVR 119
           W++     ++S      D   +  + D  Y+A G+    + I+  G+      Y  DT  
Sbjct: 107 WDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIF--GVESGKKEYSLDTRG 164
Query: 120 SMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLER 179
             + S           +  + DG Y+A G+ +  + I+     K +H      +      
Sbjct: 165 KFILS-----------IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP----- 208
Query: 180 DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIY 214
                     + ++ +   S++LV A+  G IKIY
Sbjct: 209 ----------IRSLTFSPDSQLLVTASDDGYIKIY 233

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED---IVSASTDSQLKLWN 61
           ++A  SAD  V  +D   T + +  +  H + V+   F NK +   + + S D  LKLW+
Sbjct: 678 YIATCSADKKVKIWD-SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 736
Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
           +N+  C  +  GH N  N    + D + +A  S + +L ++
Sbjct: 737 LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 777

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED---IVSASTDSQLKLWN 61
           ++A  SAD  V  +D   T + +  +  H + V+   F NK +   + + S D  LKLW+
Sbjct: 671 YIATCSADKKVKIWD-SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729
Query: 62  INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
           +N+  C  +  GH N  N    + D + +A  S + +L ++
Sbjct: 730 LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL--NKEDIVSASTDSQLKLWNIN 63
           LA GSAD  V  +DLRN K  L  F+ H+  +  V++   N+  + S+ TD +L +W+++
Sbjct: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Query: 64  K 64
           K
Sbjct: 349 K 349

>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 17/114 (14%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL--NKEDIVSASTDSQLKLWNIN 63
           LA GSAD  V  +DLRN K  L  F+ H+  +  V +   N+  + S+ TD +L +W+++
Sbjct: 291 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 350
Query: 64  K--------------PNCLRSFVGHINDKNFVGLATDGDYVACG-SENNSLYIY 102
           K              P  L    GH    +      +  +V C  SE+N + I+
Sbjct: 351 KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 404

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL--NKEDIVSASTDSQLKLWNIN 63
           LA GSAD  V  +DLRN K  L  F+ H+  +  V++   N+  + S+ TD +L +W+++
Sbjct: 297 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 356
Query: 64  K 64
           K
Sbjct: 357 K 357

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL--NKEDIVSASTDSQLKLWNIN 63
           LA GSAD  V  +DLRN K  L  F+ H+  +  V++   N+  + S+ TD +L +W+++
Sbjct: 295 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 354
Query: 64  K 64
           K
Sbjct: 355 K 355

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL--NKEDIVSASTDSQLKLWNIN 63
           LA GSAD  V  +DLRN K  L  F+ H+  +  V++   N+  + S+ TD +L +W+++
Sbjct: 293 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352
Query: 64  K 64
           K
Sbjct: 353 K 353

>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 6   LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL--NKEDIVSASTDSQLKLWNIN 63
           LA GSAD  V  +DLRN K  L  F+ H+  +  V +   N+  + S+ TD +L +W+++
Sbjct: 291 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 350
Query: 64  K 64
           K
Sbjct: 351 K 351

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 31  KGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG 87
           +GHR  VS V+F     +  IVSAS D  +K+WN++      +  GH    + V ++ DG
Sbjct: 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 573
Query: 88  DYVACGSENNSLYIYYKGLSKHMHAYRFDTV 118
              A G ++  + ++     K +++   ++V
Sbjct: 574 SLCASGGKDGVVLLWDLAEGKKLYSLEANSV 604

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 9   GSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL 68
           GS D  +  ++   T E +    GH   V  +  L+++ +VS S D+ L++W+I    CL
Sbjct: 175 GSTDRTLKVWNA-ETGECIHTLYGHTSTVRCM-HLHEKRVVSGSRDATLRVWDIETGQCL 232
Query: 69  RSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG 128
              +GH+     V    DG  V  G+ +  + ++       +H  +             G
Sbjct: 233 HVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTLQ-------------G 277
Query: 129 HINDKNFVGLATDGDYVACGSENNSLYIY 157
           H N      L  DG +V  GS + S+ ++
Sbjct: 278 HTN--RVYSLQFDGIHVVSGSLDTSIRVW 304

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 4/155 (2%)
Query: 4   CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKF-LNKEDIVSASTDSQLKLWNI 62
           C     S D  +  +DLR T      F GH+  V  V F  +   I+SA  + ++KLWNI
Sbjct: 89  CFAISSSWDKTLRLWDLR-TGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147
Query: 63  NKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML 122
               C  S     N  ++V        +   ++      Y+  +        ++T    +
Sbjct: 148 LG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQI 205
Query: 123 ESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157
             +F  H ++ N + ++ +G Y+A G ++  L I+
Sbjct: 206 RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIW 240

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/225 (20%), Positives = 87/225 (38%), Gaps = 50/225 (22%)
Query: 30  FKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD 88
            +GH   VS V   +     +S S D  L+LW++      R FVGH  D   V  ++D  
Sbjct: 82  LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 141
Query: 89  YVACGSENNSLYIYYK-GLSKHM-----HAYRFDTVR----------------------- 119
            +  GS + ++ ++   G+ K+      H+     VR                       
Sbjct: 142 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201
Query: 120 ---SMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 176
                L+++ +GH    N V ++ DG   A G ++    ++     KH++          
Sbjct: 202 LANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-------- 253
Query: 177 LERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL 221
                   D  + ++A+C+   +R  + A +   IKI+ +  +++
Sbjct: 254 --------DGGDIINALCFSP-NRYWLCAATGPSIKIWDLEGKII 289

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/225 (20%), Positives = 87/225 (38%), Gaps = 50/225 (22%)
Query: 30  FKGHRKAVSYVKFLNKEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD 88
            +GH   VS V   +     +S S D  L+LW++      R FVGH  D   V  ++D  
Sbjct: 59  LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 89  YVACGSENNSLYIYYK-GLSKHM-----HAYRFDTVR----------------------- 119
            +  GS + ++ ++   G+ K+      H+     VR                       
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 178
Query: 120 ---SMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 176
                L+++ +GH    N V ++ DG   A G ++    ++     KH++          
Sbjct: 179 LANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-------- 230
Query: 177 LERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL 221
                   D  + ++A+C+   +R  + A +   IKI+ +  +++
Sbjct: 231 --------DGGDIINALCFSP-NRYWLCAATGPSIKIWDLEGKII 266

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.98
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.98
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.98
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.98
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.98
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.98
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.97
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.97
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.97
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.96
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.96
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.96
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.95
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.94
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.94
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.93
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.92
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.91
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.91
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.91
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.91
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.91
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.91
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.9
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.9
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.9
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.9
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.9
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.9
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.89
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.89
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.88
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.87
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.87
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.86
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.86
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.86
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.86
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.85
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.85
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.85
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.85
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.85
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.85
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.84
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.84
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.81
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.8
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.8
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.8
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.8
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.8
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.78
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.77
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.77
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.76
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.76
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.74
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.74
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.73
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.73
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.72
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.72
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.72
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.7
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.7
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.7
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.69
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.69
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.68
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.68
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.68
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.67
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.64
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.62
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.62
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.62
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.6
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.59
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.59
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.59
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.59
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.58
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.58
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.57
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.57
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.57
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.56
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.54
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.53
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.53
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.52
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.5
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.5
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.49
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.48
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.47
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.47
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.44
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.41
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.41
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.41
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.38
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.37
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.37
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.35
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.34
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.34
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.31
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.31
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.29
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.28
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.25
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.25
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.24
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.21
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.21
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.2
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.19
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.16
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.15
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.14
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.14
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.11
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.11
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.1
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.1
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.09
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.08
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.06
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.03
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.0
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.99
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.96
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.95
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.93
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.87
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.77
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.75
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.74
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.73
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.72
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.69
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.63
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.63
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.61
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.6
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.6
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.58
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.54
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.54
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.53
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.53
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.52
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.49
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.48
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.41
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.39
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.36
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.34
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.34
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.32
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.32
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.29
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.28
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.27
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	98.24
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.24
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.23
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.17
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.16
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	98.11
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.1
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.09
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	98.06
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.06
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.96
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.94
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.93
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.92
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.9
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.88
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.85
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.85
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.83
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.79
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.75
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.75
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.74
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.72
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.67
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.65
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.63
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.55
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.53
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.47
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.47
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.44
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.44
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.35
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.26
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.26
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.2
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.17
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.14
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.07
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.05
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.02
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	96.94
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.87
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	96.75
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.74
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.57
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	96.57
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.33
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	96.31
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	96.23
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	96.11
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.08
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.05
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.02
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.0
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	95.74
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	95.53
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	95.51
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	95.48
3ott_A	758	Two-component system sensor histidine kinase; beta	95.25
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	95.15
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	94.89
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	94.38
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	94.12
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	93.13
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	93.04
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	92.01
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	91.02
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	90.91
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	90.7
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	90.47
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	90.43
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	90.03
3ott_A	758	Two-component system sensor histidine kinase; beta	90.03
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	89.95
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	89.95
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	85.02
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	84.07
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	83.86
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	83.24
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	82.63

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=5.4e-42  Score=251.61  Aligned_cols=200  Identities=22%  Similarity=0.268  Sum_probs=168.1

Q ss_pred             ceEEEEeCCCeEEEEEecCCceee----EEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEAL----AVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~----~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      +.|++|+.||.|+|||+. +++.+    ..+.+|.+.|++++|+|+ .+|++++.|++|++||+++++++..+.+|...|
T Consensus        94 ~~l~~~s~dg~v~lWd~~-~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V  172 (344)
T 4gqb_B           94 RGILVASDSGAVELWELD-ENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV  172 (344)
T ss_dssp             TEEEEEETTSEEEEEEEC-TTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred             CeEEEEECCCEEEEEecc-CCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence            568899999999999998 44333    234579999999999985 569999999999999999999999999999999


Q ss_pred             eEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEE--------------------------------eecccceeEee
Q psy10662         79 NFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYR--------------------------------FDTVRSMLESS  125 (221)
Q Consensus        79 ~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~  125 (221)
                      .+++|+|++. ++++++.|+.|++||+++++....+.                                |+......+..
T Consensus       173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~  252 (344)
T 4gqb_B          173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS  252 (344)
T ss_dssp             EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE
T ss_pred             EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE
Confidence            9999999885 78999999999999999887665442                                45555666677


Q ss_pred             EEEeeCceEEEEEecCC-CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEE
Q psy10662        126 FVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLV  203 (221)
Q Consensus       126 ~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~  203 (221)
                      +.+|...|++++|+|++ ++|++|+.|+.|++||+++++...                ..+|...|++++|+|+++ +|+
T Consensus       253 ~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~----------------~~~H~~~V~~v~~sp~~~~lla  316 (344)
T 4gqb_B          253 SAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR----------------SQAHRDFVRDATWSPLNHSLLT  316 (344)
T ss_dssp             EECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE----------------ECCCSSCEEEEEECSSSTTEEE
T ss_pred             EcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE----------------EcCCCCCEEEEEEeCCCCeEEE
Confidence            88999999999999998 579999999999999998765321                237899999999999986 567


Q ss_pred             EecCCCeEEEEECCccc
Q psy10662        204 AANSQGIIKIYVIPIRV  220 (221)
Q Consensus       204 ~~~~dg~i~iw~~~~~~  220 (221)
                      +++.|++|++|++++..
T Consensus       317 s~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          317 TVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             EEETTSCEEEEECCC--
T ss_pred             EEcCCCeEEEEECCCCC
Confidence            89999999999998764

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=2.5e-41  Score=253.79  Aligned_cols=204  Identities=15%  Similarity=0.311  Sum_probs=182.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++.+|++|+.||.|++||+. +++....+.+|.+.|.+++|+|+ ..|++|+.|++|++||+.+++++..+.+|...|.
T Consensus       118 p~~~~l~s~s~Dg~i~vwd~~-~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~  196 (410)
T 1vyh_C          118 PVFSVMVSASEDATIKVWDYE-TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS  196 (410)
T ss_dssp             SSSSEEEEEESSSCEEEEETT-TCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE
T ss_pred             CCCCEEEEEeCCCeEEEEECC-CCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE
Confidence            678999999999999999998 77888899999999999999974 5689999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------------eecccceeEeeEEEee
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRSMLESSFVGHI  130 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~  130 (221)
                      +++|+|+++++++++.|+.|++||+++++.+..+.                             |+.........+.+|.
T Consensus       197 ~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~  276 (410)
T 1vyh_C          197 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR  276 (410)
T ss_dssp             EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred             EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCC
Confidence            99999999999999999999999999988776654                             4444555566777889


Q ss_pred             CceEEEEEecC--------------------CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662        131 NDKNFVGLATD--------------------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV  190 (221)
Q Consensus       131 ~~v~~~~~~~~--------------------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  190 (221)
                      ..|.+++|+|+                    +.+|++|+.|+.|++||++++..+..+.               +|...|
T Consensus       277 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~---------------~h~~~v  341 (410)
T 1vyh_C          277 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---------------GHDNWV  341 (410)
T ss_dssp             SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE---------------CCSSCE
T ss_pred             ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE---------------CCCCcE
Confidence            99999999996                    6789999999999999999887665553               688899


Q ss_pred             eEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        191 SAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       191 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+++|+|+|++|++++.||.|++||+.+++
T Consensus       342 ~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~  371 (410)
T 1vyh_C          342 RGVLFHSGGKFILSCADDKTLRVWDYKNKR  371 (410)
T ss_dssp             EEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence            999999999999999999999999998764

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=4.2e-41  Score=243.31  Aligned_cols=207  Identities=15%  Similarity=0.181  Sum_probs=175.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.||.|++||+. ++..+..+..|..+|.+++|+| ++.|++++.|+.|++||+++++.+..+.+|...|.
T Consensus        23 p~~~~l~s~~~dg~v~lWd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~  101 (304)
T 2ynn_A           23 PTEPWVLTTLYSGRVELWNYE-TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR  101 (304)
T ss_dssp             SSSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             CCCCEEEEEcCCCcEEEEECC-CCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEE
Confidence            789999999999999999998 7788899999999999999997 56699999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d  158 (221)
                      +++|+|+++++++++.|+.|++||++++..+.            ..+.+|...|.+++|+| ++.+|++|+.|+.|++||
T Consensus       102 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~------------~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd  169 (304)
T 2ynn_A          102 SIAVHPTKPYVLSGSDDLTVKLWNWENNWALE------------QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS  169 (304)
T ss_dssp             EEEECSSSSEEEEEETTSCEEEEEGGGTTEEE------------EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred             EEEEcCCCCEEEEECCCCeEEEEECCCCcchh------------hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999999999999998764332            23578999999999999 678999999999999999


Q ss_pred             cCCCCceeeee-----------eec--ccc-----------------cccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        159 KGLSKHMHAYR-----------FDT--VRS-----------------MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       159 ~~~~~~~~~~~-----------~~~--~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      +++......+.           +.+  ...                 .......+.+|...|.+++|+|++++|++++.|
T Consensus       170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~D  249 (304)
T 2ynn_A          170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSED  249 (304)
T ss_dssp             TTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred             CCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCC
Confidence            87654432221           111  000                 111234456889999999999999999999999


Q ss_pred             CeEEEEECCccc
Q psy10662        209 GIIKIYVIPIRV  220 (221)
Q Consensus       209 g~i~iw~~~~~~  220 (221)
                      |.|++||+.+++
T Consensus       250 g~i~iWd~~~~~  261 (304)
T 2ynn_A          250 GTLKIWNSSTYK  261 (304)
T ss_dssp             SCEEEEETTTCC
T ss_pred             CeEEEEECCCCc
Confidence            999999998765

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=8.4e-41  Score=243.40  Aligned_cols=188  Identities=17%  Similarity=0.237  Sum_probs=172.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.||.|++|++. .++....+..|...|.+++|+|+ ..|++++.|+.|++||+++++.+..+.+|..+|.
T Consensus       132 pdg~~l~~g~~dg~v~i~~~~-~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~  210 (321)
T 3ow8_A          132 PDSQYLATGTHVGKVNIFGVE-SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR  210 (321)
T ss_dssp             TTSSEEEEECTTSEEEEEETT-TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCC
T ss_pred             CCCCEEEEEcCCCcEEEEEcC-CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCcee
Confidence            689999999999999999998 67777888889999999999985 5689999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++|+|++++|++++.|+.|++||+++++....             +.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus       211 ~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~-------------~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~  277 (321)
T 3ow8_A          211 SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-------------LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV  277 (321)
T ss_dssp             EEEECTTSCEEEEECTTSCEEEEETTTCCEEEE-------------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             EEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE-------------EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence            999999999999999999999999988776554             4788999999999999999999999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      .+++.+..+.               +|...|.+++|+|++++|++++.||.|++||++
T Consensus       278 ~~~~~~~~~~---------------~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          278 GTRTCVHTFF---------------DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             TTTEEEEEEC---------------CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             CCCEEEEEEc---------------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            9887766553               688899999999999999999999999999986

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.1e-40  Score=239.77  Aligned_cols=191  Identities=14%  Similarity=0.191  Sum_probs=173.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++.++++|+.|+.|++||+. +++.+..+..|...+.+++|+|+ ..|++++.|+.|++||+++++....+..|...+.
T Consensus        90 ~~~~~l~s~s~D~~i~lWd~~-~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~  168 (321)
T 3ow8_A           90 HTLPIAASSSLDAHIRLWDLE-NGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL  168 (321)
T ss_dssp             SSSSEEEEEETTSEEEEEETT-TTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEE
T ss_pred             CCCCEEEEEeCCCcEEEEECC-CCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEE
Confidence            467899999999999999998 77888889999999999999985 5688999999999999999998888888889999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++|+|++++|++++.|+.|++||+++++.+..+             .+|...|.+++|+|++++|++++.|+.|++||+
T Consensus       169 ~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~-------------~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~  235 (321)
T 3ow8_A          169 SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-------------EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV  235 (321)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-------------CCCSSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred             EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-------------cccCCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence            9999999999999999999999999988876553             678899999999999999999999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++.+....+               .+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus       236 ~~~~~~~~~---------------~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~  281 (321)
T 3ow8_A          236 QHANLAGTL---------------SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT  281 (321)
T ss_dssp             TTCCEEEEE---------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred             CCcceeEEE---------------cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence            887765444               3788899999999999999999999999999998764

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=3.3e-40  Score=247.76  Aligned_cols=201  Identities=22%  Similarity=0.380  Sum_probs=178.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.|+.|++||+. +.+++..+.+|...|.+++|+|+ ..|++++.|++|++||++++.++..+.+|...|.
T Consensus       160 ~~~~~l~sgs~D~~i~iwd~~-~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~  238 (410)
T 1vyh_C          160 HSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR  238 (410)
T ss_dssp             TTSSEEEEEETTSCCCEEETT-SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             CCCCEEEEEeCCCeEEEEeCC-CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEE
Confidence            678999999999999999998 77888889999999999999985 5699999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------------------------------------------
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------------------------------------------  114 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------------------------------------------  114 (221)
                      ++.++|++.++++++.|+.|++||+.+++....+.                                             
T Consensus       239 ~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~  318 (410)
T 1vyh_C          239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK  318 (410)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred             EEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence            99999999999999999999999998776544331                                             


Q ss_pred             ----eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662        115 ----FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV  190 (221)
Q Consensus       115 ----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  190 (221)
                          |+.........+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.               +|...|
T Consensus       319 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~---------------~h~~~v  383 (410)
T 1vyh_C          319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN---------------AHEHFV  383 (410)
T ss_dssp             EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE---------------CCSSCE
T ss_pred             eEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc---------------CCCCcE
Confidence                3445556667788899999999999999999999999999999998877665553               688899


Q ss_pred             eEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        191 SAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       191 ~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ++++|+|++.+|++|+.||.|++|+++
T Consensus       384 ~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          384 TSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             EEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence            999999999999999999999999874

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=4.4e-39  Score=236.16  Aligned_cols=194  Identities=21%  Similarity=0.332  Sum_probs=172.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc---eeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK---EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |++++|++|+.|+.|++|++....   .....+.+|.+.|.++.|++++.+++++.|+.|++||+++++.+..+.+|...
T Consensus       107 ~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~  186 (340)
T 1got_B          107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGD  186 (340)
T ss_dssp             TTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred             CCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCc
Confidence            688999999999999999997322   45667889999999999999889999999999999999999999999999999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      |.+++|+|++.++++++.|+.|++||+++++.+..             +.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus       187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~-------------~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iw  253 (340)
T 1got_B          187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT-------------FTGHESDINAICFFPNGNAFATGSDDATCRLF  253 (340)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE-------------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE-------------EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence            99999999999999999999999999998877655             46889999999999999999999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |+++.+.+..+.             ...+...|.+++|+|+|++|++|+.||.|++||+.+++
T Consensus       254 d~~~~~~~~~~~-------------~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~  303 (340)
T 1got_B          254 DLRADQELMTYS-------------HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD  303 (340)
T ss_dssp             ETTTTEEEEEEC-------------CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred             ECCCCcEEEEEc-------------cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence            998876554432             11234579999999999999999999999999997653

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.9e-39  Score=238.11  Aligned_cols=185  Identities=18%  Similarity=0.303  Sum_probs=165.5

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG   82 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~   82 (221)
                      ..+++++.|+.|++||+. +++.+..+.+|.+.|.+++|+|+ ..+++++.|+.|++||+++++.+..+.+|...|.+++
T Consensus       155 ~~l~s~s~d~~i~~wd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~  233 (340)
T 1got_B          155 NQIVTSSGDTTCALWDIE-TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC  233 (340)
T ss_dssp             TEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE
T ss_pred             CcEEEEECCCcEEEEECC-CCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEE
Confidence            458899999999999998 78888899999999999999985 4588999999999999999999999999999999999


Q ss_pred             EeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC
Q psy10662         83 LATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS  162 (221)
Q Consensus        83 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~  162 (221)
                      |+|++++|++++.|+.|++||+++++.+..+.           ...+...+.+++|+|++++|++|+.|+.|++||+.+.
T Consensus       234 ~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-----------~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~  302 (340)
T 1got_B          234 FFPNGNAFATGSDDATCRLFDLRADQELMTYS-----------HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA  302 (340)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----------CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             EcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-----------cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence            99999999999999999999999888765541           1123347899999999999999999999999999887


Q ss_pred             CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        163 KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      +....+.               +|...|.+++|+|+|++|++|+.|+.|++||
T Consensus       303 ~~~~~~~---------------~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          303 DRAGVLA---------------GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             CEEEEEE---------------CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             cEeeEee---------------cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            7655543               7889999999999999999999999999996

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3e-39  Score=238.21  Aligned_cols=188  Identities=16%  Similarity=0.276  Sum_probs=167.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |++..|++|+.|++|++||++ +++.+..+.+|...|.+++|+|   +..|++++.||.|++||+++++++..+..|...
T Consensus       164 ~~~~~l~t~s~D~~v~lwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~  242 (354)
T 2pbi_B          164 NSDMQILTASGDGTCALWDVE-SGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESD  242 (354)
T ss_dssp             SSSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred             CCCCEEEEEeCCCcEEEEeCC-CCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC
Confidence            567899999999999999998 7888899999999999999986   357999999999999999999999999999999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      |.+++|+|++.++++++.|+.|++||++..+.+..+.           ...+...+.+++|+|++++|++|+.|+.|++|
T Consensus       243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~-----------~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vw  311 (354)
T 2pbi_B          243 VNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS-----------KESIIFGASSVDFSLSGRLLFAGYNDYTINVW  311 (354)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----------CTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             eEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-----------CCCcccceeEEEEeCCCCEEEEEECCCcEEEE
Confidence            9999999999999999999999999999887665431           11223468899999999999999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      |+.+++.+..+               .+|...|.+++|+|+|++|++++.||.|++|+
T Consensus       312 d~~~~~~~~~l---------------~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          312 DVLKGSRVSIL---------------FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             ETTTCSEEEEE---------------CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             ECCCCceEEEE---------------ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            99887765444               37889999999999999999999999999996

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.3e-38  Score=231.76  Aligned_cols=219  Identities=19%  Similarity=0.325  Sum_probs=171.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCC------ceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNT------KEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~------~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~   74 (221)
                      |+++|++|+.|++|++||+...      +.+...+.+|...|.+++|+|+ ..+++++.|++|++||+++++.+..+.+|
T Consensus        38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h  117 (343)
T 2xzm_R           38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH  117 (343)
T ss_dssp             CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred             CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence            7889999999999999999732      3456778899999999999985 55889999999999999999999999999


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee------------eEEEEeec-------------------------
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH------------MHAYRFDT-------------------------  117 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~------------~~~~~~~~-------------------------  117 (221)
                      ...|.+++|+|+++++++++.|+.|++||+.....            +..+.+.+                         
T Consensus       118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~  197 (343)
T 2xzm_R          118 QSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK  197 (343)
T ss_dssp             CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred             CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence            99999999999999999999999999999863221            12222211                         


Q ss_pred             ---ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC-Cc---------eeeeeeecccccc-------
Q psy10662        118 ---VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS-KH---------MHAYRFDTVRSML-------  177 (221)
Q Consensus       118 ---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~---------~~~~~~~~~~~~~-------  177 (221)
                         ........+.+|...|.+++|+|++++|++|+.||.|++||+... ..         +..+.|.+....+       
T Consensus       198 iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~  277 (343)
T 2xzm_R          198 VWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQG  277 (343)
T ss_dssp             EEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSC
T ss_pred             EEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCC
Confidence               122334566788999999999999999999999999999998432 22         1222232221100       


Q ss_pred             -----------c---cc--------ccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        178 -----------E---RD--------RNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       178 -----------~---~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                                 .   .+        ....+|...|.+++|+|+|++|++|+.||.|++|+++++.
T Consensus       278 v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~  342 (343)
T 2xzm_R          278 VKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA  342 (343)
T ss_dssp             EEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred             EEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence                       0   00        0112577789999999999999999999999999998763

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1.5e-38  Score=231.46  Aligned_cols=204  Identities=19%  Similarity=0.330  Sum_probs=169.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.|+.|++||+. +++.+..+.+|...|.+++|+|+ ..+++++.|++|++||++ ++.+..+.+|...|.
T Consensus        75 ~dg~~l~s~s~D~~v~~wd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~  152 (319)
T 3frx_A           75 ADGAYALSASWDKTLRLWDVA-TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVS  152 (319)
T ss_dssp             TTSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEE
T ss_pred             CCCCEEEEEeCCCEEEEEECC-CCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEE
Confidence            689999999999999999998 78888999999999999999974 569999999999999996 556677888999999


Q ss_pred             EEEEeCCC------CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         80 FVGLATDG------DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        80 ~~~~~~~~------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      ++.|.|..      ..+++++.|+.|++||+++.+....             +.+|...|.+++|+|++++|++++.||.
T Consensus       153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-------------~~~h~~~v~~~~~sp~g~~l~s~~~dg~  219 (319)
T 3frx_A          153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD-------------FIGHNSNINTLTASPDGTLIASAGKDGE  219 (319)
T ss_dssp             EEEECCC------CCEEEEEETTSCEEEEETTTTEEEEE-------------ECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred             EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhee-------------ecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence            99999854      4899999999999999988776544             4789999999999999999999999999


Q ss_pred             EEEEEcCCCCceeeee---------eeccccccc-------------------cc-----ccccccccceeEEEEcCCCc
Q psy10662        154 LYIYYKGLSKHMHAYR---------FDTVRSMLE-------------------RD-----RNEDDTNEFVSAVCWRQLSR  200 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~---------~~~~~~~~~-------------------~~-----~~~~~~~~~v~~~~~~~~~~  200 (221)
                      |++||+.+++.+..+.         |.+.+..+.                   ..     .....+...+.+++|+|+|+
T Consensus       220 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~  299 (319)
T 3frx_A          220 IMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ  299 (319)
T ss_dssp             EEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS
T ss_pred             EEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC
Confidence            9999998877655443         222111100                   00     01123456789999999999


Q ss_pred             EEEEecCCCeEEEEECCcc
Q psy10662        201 VLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       201 ~l~~~~~dg~i~iw~~~~~  219 (221)
                      +|++|+.||.|++|++.++
T Consensus       300 ~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          300 TLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             EEEEEETTSCEEEEEEEEC
T ss_pred             EEEEeecCceEEEEEEeec
Confidence            9999999999999999875

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=2.8e-39  Score=238.60  Aligned_cols=188  Identities=17%  Similarity=0.250  Sum_probs=164.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCccceee--ecccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPNCLRSF--VGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~--~~~~~   76 (221)
                      ||+++|++|+.||.|++||+. +++.+..+.+|...|.+++|+++  ..+++++.|+.|++||++++++...+  ..+..
T Consensus       149 pdg~~l~sgs~dg~v~iwd~~-~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~  227 (357)
T 4g56_B          149 SDGTQAVSGGKDFSVKVWDLS-QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDT  227 (357)
T ss_dssp             SSSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCS
T ss_pred             CCCCEEEEEeCCCeEEEEECC-CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccc
Confidence            689999999999999999998 78889999999999999999974  46889999999999999998877655  34667


Q ss_pred             ceeEEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC-CEEEEecCCCeE
Q psy10662         77 DKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG-DYVACGSENNSL  154 (221)
Q Consensus        77 ~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i  154 (221)
                      .+.+++|+|++ .++++|+.|+.|++||+++++.+..             +.+|...|++++|+|++ ++|++|+.|+.|
T Consensus       228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~-------------~~~~~~~v~~l~~sp~~~~~lasgs~D~~i  294 (357)
T 4g56_B          228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQT-------------SAVHSQNITGLAYSYHSSPFLASISEDCTV  294 (357)
T ss_dssp             CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEE-------------ECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred             cccchhhhhcccceEEEeecccceeEEECCCCcEeEE-------------EeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence            89999999975 5789999999999999998877655             46788999999999987 579999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEECCc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++||+++++.+..+                +|...|++++|+| ++++|++++.||.|++|++++
T Consensus       295 ~iwd~~~~~~~~~~----------------~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~  343 (357)
T 4g56_B          295 AVLDADFSEVFRDL----------------SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS  343 (357)
T ss_dssp             EEECTTSCEEEEEC----------------CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred             EEEECCCCcEeEEC----------------CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence            99999877654322                5888999999998 799999999999999999975

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.9e-38  Score=230.15  Aligned_cols=192  Identities=22%  Similarity=0.316  Sum_probs=172.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.||.|++|++. .++....+.+|...|.+++|+|+ ..|++++.|+.|++||+++++.+..+.+|...|.
T Consensus        33 ~~~~~l~s~~~dg~i~iw~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~  111 (312)
T 4ery_A           33 PNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF  111 (312)
T ss_dssp             TTSSEEEEEETTSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             CCCCEEEEeeCCCeEEEEeCC-CcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence            689999999999999999997 67778889999999999999985 5689999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++|+|+++++++++.|+.|++||+++++.+..+             ..|...+.+++|+|+++++++++.||.|++||+
T Consensus       112 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~  178 (312)
T 4ery_A          112 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-------------PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT  178 (312)
T ss_dssp             EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-------------cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence            9999999999999999999999999988776553             678889999999999999999999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++++.+..+.              ..+...+..++|+|++++|++++.||.|++||+.+++
T Consensus       179 ~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~  225 (312)
T 4ery_A          179 ASGQCLKTLI--------------DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK  225 (312)
T ss_dssp             TTCCEEEEEC--------------CSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred             CCCceeeEEe--------------ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence            8877654432              1355678999999999999999999999999998764

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.1e-38  Score=229.85  Aligned_cols=196  Identities=14%  Similarity=0.194  Sum_probs=164.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecC-CceeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCc--cceeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN-TKEALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPN--CLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~   74 (221)
                      |+|++||+|+.|+.|+|||+.. ..+.+..+.+|.++|.+++|++   +..|++++.|++|++||+++++  .+..+..|
T Consensus        19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h   98 (297)
T 2pm7_B           19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH   98 (297)
T ss_dssp             TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC
T ss_pred             CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC
Confidence            6899999999999999999973 2467788999999999999974   5679999999999999998874  45567789


Q ss_pred             ccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-----------
Q psy10662         75 INDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-----------  141 (221)
Q Consensus        75 ~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------  141 (221)
                      ...|.+++|+|+  +.+|++++.|+.|++||++.+....           ...+.+|...|.+++|+|+           
T Consensus        99 ~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-----------~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~  167 (297)
T 2pm7_B           99 SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-----------PIIIDAHAIGVNSASWAPATIEEDGEHNGT  167 (297)
T ss_dssp             SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-----------CEEEECCSSCEEEEEECCCC----------
T ss_pred             CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-----------eeeeecccCccceEeecCCcccccccCCCC
Confidence            999999999997  7899999999999999998653211           1235688899999999997           


Q ss_pred             --CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC---cEEEEecCCCeEEEEEC
Q psy10662        142 --GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS---RVLVAANSQGIIKIYVI  216 (221)
Q Consensus       142 --~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iw~~  216 (221)
                        +++|++|+.|+.|++||++++......           ...+.+|...|.+++|+|++   ++|++++.|+.|++|++
T Consensus       168 ~~~~~l~sgs~D~~v~lwd~~~~~~~~~~-----------~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~  236 (297)
T 2pm7_B          168 KESRKFVTGGADNLVKIWKYNSDAQTYVL-----------ESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ  236 (297)
T ss_dssp             --CCEEEEEETTSCEEEEEEETTTTEEEE-----------EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred             CCcceEEEEcCCCcEEEEEEcCCCceEEE-----------EEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence              579999999999999998776532211           11234789999999999984   89999999999999998


Q ss_pred             Cc
Q psy10662        217 PI  218 (221)
Q Consensus       217 ~~  218 (221)
                      .+
T Consensus       237 ~~  238 (297)
T 2pm7_B          237 DN  238 (297)
T ss_dssp             SS
T ss_pred             CC
Confidence            75

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=5e-39  Score=235.85  Aligned_cols=204  Identities=12%  Similarity=0.132  Sum_probs=161.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecC----------CceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN----------TKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRS   70 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~   70 (221)
                      |||++|++++ |+++++||...          ..........+...|.+++|+|++.|++++.||+|++||+++++.+..
T Consensus        40 ~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~  118 (344)
T 4gqb_B           40 SDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIV  118 (344)
T ss_dssp             TTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEE
T ss_pred             CCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeE
Confidence            6899999887 67778776320          111122334477889999999999999999999999999998876654


Q ss_pred             e----eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE------------------------------ee
Q psy10662         71 F----VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR------------------------------FD  116 (221)
Q Consensus        71 ~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------------------------------~~  116 (221)
                      +    .+|.+.|++++|+|++++|++++.|+.|++||+++++.+..+.                              |+
T Consensus       119 ~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd  198 (344)
T 4gqb_B          119 SKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWD  198 (344)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             eeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccc
Confidence            3    4799999999999999999999999999999999998887764                              33


Q ss_pred             cccceeEeeE--EEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEE
Q psy10662        117 TVRSMLESSF--VGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAV  193 (221)
Q Consensus       117 ~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  193 (221)
                      ....+....+  ..+...+.+++|+| +++++++|+.||.|++||+++++.+..+.               +|...|+++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~---------------~h~~~v~~v  263 (344)
T 4gqb_B          199 TRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA---------------VHSQCVTGL  263 (344)
T ss_dssp             TTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE---------------CCSSCEEEE
T ss_pred             ccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc---------------CCCCCEEEE
Confidence            3333333333  23455688999998 45788999999999999999887766554               788899999


Q ss_pred             EEcCCC-cEEEEecCCCeEEEEECCccc
Q psy10662        194 CWRQLS-RVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       194 ~~~~~~-~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +|+|++ ++|++++.|+.|++||+.+++
T Consensus       264 ~fsp~g~~~lasgs~D~~i~vwd~~~~~  291 (344)
T 4gqb_B          264 VFSPHSVPFLASLSEDCSLAVLDSSLSE  291 (344)
T ss_dssp             EECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred             EEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence            999998 589999999999999998875

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=2.7e-38  Score=230.08  Aligned_cols=189  Identities=16%  Similarity=0.258  Sum_probs=165.6

Q ss_pred             CceEEEEeCCCeEEEEEecCC----ceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNT----KEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      +++|++|+.|++|++|++...    +.++..+.+|...|.+++|+|+ .+|++++.|++|++||+++++.+..+.+|...
T Consensus        30 ~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~  109 (319)
T 3frx_A           30 PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD  109 (319)
T ss_dssp             TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred             ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc
Confidence            479999999999999998632    3457788999999999999975 56899999999999999999999999999999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC------CCEEEEecCC
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD------GDYVACGSEN  151 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d  151 (221)
                      |.+++|+|++.++++++.|+.|++||++.. .+             ..+.+|...+.+++|+|.      +..+++++.|
T Consensus       110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~-------------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d  175 (319)
T 3frx_A          110 VMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CL-------------ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGND  175 (319)
T ss_dssp             EEEEEECTTSCEEEEEETTSCEEEEETTSC-EE-------------EEECCCSSCEEEEEECCC------CCEEEEEETT
T ss_pred             EEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eE-------------EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCC
Confidence            999999999999999999999999998643 32             234688899999999985      4589999999


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.|++||+++.+....+               .+|...|.+++|+|+|++|++++.||.|++||+.+++
T Consensus       176 ~~i~~wd~~~~~~~~~~---------------~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~  229 (319)
T 3frx_A          176 KMVKAWNLNQFQIEADF---------------IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK  229 (319)
T ss_dssp             SCEEEEETTTTEEEEEE---------------CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred             CEEEEEECCcchhheee---------------cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence            99999999876654433               3788899999999999999999999999999998764

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=234.30  Aligned_cols=192  Identities=17%  Similarity=0.279  Sum_probs=162.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceee--E-EEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC--ccceeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEAL--A-VFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP--NCLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~--~-~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~--~~~~~~~~~   74 (221)
                      |+|++||+|+.|+.|+|||+. .+...  . ...+|...|.+++|+|+ .+|++++.|+.+++||+..+  +.+..+.+|
T Consensus        26 p~g~~las~~~D~~i~iw~~~-~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h  104 (345)
T 3fm0_A           26 PAGTLLASCGGDRRIRIWGTE-GDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGH  104 (345)
T ss_dssp             TTSSCEEEEETTSCEEEEEEE-TTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCC
T ss_pred             CCCCEEEEEcCCCeEEEEEcC-CCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCC
Confidence            789999999999999999998 44322  2 22579999999999985 56999999999999999776  456778899


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      ...|.+++|+|++++|++++.|+.|++||++.++...          ....+.+|...|.+++|+|++++|++++.|+.|
T Consensus       105 ~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~----------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i  174 (345)
T 3fm0_A          105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE----------CVSVLNSHTQDVKHVVWHPSQELLASASYDDTV  174 (345)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE----------EEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred             CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE----------EEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence            9999999999999999999999999999998664322          223457888999999999999999999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      ++||.+.......             ..+.+|...|.+++|+|+|++|++++.|+.|++|+.
T Consensus       175 ~~w~~~~~~~~~~-------------~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~  223 (345)
T 3fm0_A          175 KLYREEEDDWVCC-------------ATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ  223 (345)
T ss_dssp             EEEEEETTEEEEE-------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred             EEEEecCCCEEEE-------------EEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence            9999876543221             123478899999999999999999999999999996

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=9.5e-38  Score=225.76  Aligned_cols=202  Identities=18%  Similarity=0.251  Sum_probs=169.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC-ccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP-NCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~~~~v   78 (221)
                      |++++|++|+.|+.|++||+. +++.+..+.+|.+.|.+++|+|+ ..|++++.|++|++||++++ .....+.+|...|
T Consensus        65 ~~~~~l~s~s~d~~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v  143 (304)
T 2ynn_A           65 ARKNWIIVGSDDFRIRVFNYN-TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV  143 (304)
T ss_dssp             GGGTEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCE
T ss_pred             CCCCEEEEECCCCEEEEEECC-CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcE
Confidence            578899999999999999998 77888899999999999999985 56899999999999999887 4456678899999


Q ss_pred             eEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------------------eecccceeEee
Q psy10662         79 NFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------------FDTVRSMLESS  125 (221)
Q Consensus        79 ~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~  125 (221)
                      .+++|+| ++.++++++.|+.|++||+++.+....+.                                |+......+..
T Consensus       144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~  223 (304)
T 2ynn_A          144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT  223 (304)
T ss_dssp             EEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             EEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcccee
Confidence            9999999 57899999999999999987654332221                                55566677788


Q ss_pred             EEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc--EEE
Q psy10662        126 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR--VLV  203 (221)
Q Consensus       126 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~  203 (221)
                      +.+|...|.+++|+|++++|++|+.||.|++||+.+.+.+..+.               .|...+.+++|+|++.  +++
T Consensus       224 ~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~a  288 (304)
T 2ynn_A          224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN---------------VGLERSWCIATHPTGRKNYIA  288 (304)
T ss_dssp             EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC---------------CSSSSEEEEEECTTCGGGCEE
T ss_pred             eCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc---------------CCCccEEEEEECCCCCceEEE
Confidence            88999999999999999999999999999999999888766553               5667899999999875  577


Q ss_pred             EecCCCeEEEEECCcc
Q psy10662        204 AANSQGIIKIYVIPIR  219 (221)
Q Consensus       204 ~~~~dg~i~iw~~~~~  219 (221)
                      +|+.|| +.+|++...
T Consensus       289 sg~~~g-~~~~~~~~~  303 (304)
T 2ynn_A          289 SGFDNG-FTVLSLGND  303 (304)
T ss_dssp             EEETTE-EEEEECC--
T ss_pred             EecCCc-eEEEEeccC
Confidence            776555 788887653

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=4.4e-38  Score=234.09  Aligned_cols=199  Identities=19%  Similarity=0.325  Sum_probs=167.2

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEE-----EeccCceEEEEEec--CCcEEEecCCCcEEEEEcC-CCccceeeecc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVF-----KGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNIN-KPNCLRSFVGH   74 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~-----~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~-~~~~~~~~~~~   74 (221)
                      +..|++|+.|+.|++||+. +++.+..+     .+|...|.+++|++  +..+++|+.|+.|++||++ ..+.+..+.+|
T Consensus       170 ~~~l~s~s~D~~i~~wd~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h  248 (380)
T 3iz6_a          170 ETRLITGSGDQTCVLWDVT-TGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH  248 (380)
T ss_dssp             SSCEEEECTTSCEEEECTT-TCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC
T ss_pred             CCEEEEECCCCcEEEEEcC-CCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc
Confidence            4579999999999999998 67777666     57889999999985  4669999999999999998 45777888899


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      ...|.+++|+|++++|++++.|+.|++||+++++.+..+......      ...+...+++++|+|+|++|++|+.||.|
T Consensus       249 ~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~~g~~dg~i  322 (380)
T 3iz6_a          249 EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR------NDNELPIVTSVAFSISGRLLFAGYSNGDC  322 (380)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS------SCCSSCSCSEEEECSSSSEEEEECTTSCE
T ss_pred             CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc------cccccCceEEEEECCCCCEEEEEECCCCE
Confidence            999999999999999999999999999999999887765322111      01223358899999999999999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++||+..++....+.           ....+|...|++++|+|+|++|++|+.|+.|++|++...
T Consensus       323 ~vwd~~~~~~~~~~~-----------~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~  376 (380)
T 3iz6_a          323 YVWDTLLAEMVLNLG-----------TLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH  376 (380)
T ss_dssp             EEEETTTCCEEEEEC-----------CSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred             EEEECCCCceEEEEe-----------cccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence            999998777654432           012368889999999999999999999999999999865

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=4.8e-38  Score=230.28  Aligned_cols=220  Identities=19%  Similarity=0.247  Sum_probs=172.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc---eeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCC---------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK---EALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKP---------   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~---------   65 (221)
                      |++++|++|+.||.|++||+....   +....+.+|...|.+++|+|   +..|++++.||.|++||++++         
T Consensus        21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~  100 (351)
T 3f3f_A           21 FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW  100 (351)
T ss_dssp             SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred             CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence            688999999999999999998322   46777889999999999997   567999999999999999876         


Q ss_pred             ccceeeeccccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------eec---
Q psy10662         66 NCLRSFVGHINDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------FDT---  117 (221)
Q Consensus        66 ~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------~~~---  117 (221)
                      +.+..+..|...|.+++|+|+  +.++++++.|+.|++||+++++.+..+.                       |.+   
T Consensus       101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  180 (351)
T 3f3f_A          101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRF  180 (351)
T ss_dssp             EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSS
T ss_pred             ceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCC
Confidence            446677789999999999999  9999999999999999997765433221                       111   


Q ss_pred             -------------------ccc--eeEeeEEEeeCceEEEEEecCC----CEEEEecCCCeEEEEEcCCCCceeeeeeec
Q psy10662        118 -------------------VRS--MLESSFVGHINDKNFVGLATDG----DYVACGSENNSLYIYYKGLSKHMHAYRFDT  172 (221)
Q Consensus       118 -------------------~~~--~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~  172 (221)
                                         ...  .....+.+|...|.+++|+|++    ++|++++.||.|++||++............
T Consensus       181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  260 (351)
T 3f3f_A          181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESL  260 (351)
T ss_dssp             SCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------
T ss_pred             CCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcc
Confidence                               111  2245566789999999999998    899999999999999998653322110000


Q ss_pred             -------------------------------ccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        173 -------------------------------VRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       173 -------------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                                                     ..........+.+|...|++++|+|++++|++++.||.|++|++.+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~  339 (351)
T 3f3f_A          261 TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN  339 (351)
T ss_dssp             ------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred             cceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence                                           000112334456788999999999999999999999999999998764

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1e-37  Score=244.87  Aligned_cols=214  Identities=18%  Similarity=0.196  Sum_probs=169.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCC-ceeeEE--------------------------------------------EEeccC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNT-KEALAV--------------------------------------------FKGHRK   35 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~--------------------------------------------~~~~~~   35 (221)
                      |||++||+|+.||+|+|||+.+. ......                                            +.+|..
T Consensus        69 pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~  148 (611)
T 1nr0_A           69 PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR  148 (611)
T ss_dssp             TTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSS
T ss_pred             CCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCC
Confidence            79999999999999999998521 111122                                            234666


Q ss_pred             ceEEEEEecCC--cEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEE
Q psy10662         36 AVSYVKFLNKE--DIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        36 ~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  113 (221)
                      .|.+++|+|++  .|++++.|++|++||..+++....+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+
T Consensus       149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~  228 (611)
T 1nr0_A          149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF  228 (611)
T ss_dssp             CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred             CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence            77777777753  4899999999999999998888889999999999999999999999999999999999988876654


Q ss_pred             EeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccc-------------------
Q psy10662        114 RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVR-------------------  174 (221)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-------------------  174 (221)
                      ....      ....+|...|.+++|+|++++|++++.|+.|++||+.+++....+......                   
T Consensus       229 ~~~~------~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~  302 (611)
T 1nr0_A          229 EDDS------LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA  302 (611)
T ss_dssp             BCTT------SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEET
T ss_pred             cccc------ccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeC
Confidence            1000      001268899999999999999999999999999999988776555321000                   


Q ss_pred             ---------ccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        175 ---------SMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       175 ---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                               ........+.+|...|.+++|+|+|++|++++.|+.|++||+.+++
T Consensus       303 d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~  357 (611)
T 1nr0_A          303 NGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI  357 (611)
T ss_dssp             TCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred             CCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence                     0001122345789999999999999999999999999999998753

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.4e-37  Score=230.12  Aligned_cols=194  Identities=11%  Similarity=0.092  Sum_probs=158.1

Q ss_pred             CCCceEEEE--eCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcccee--eecccc
Q psy10662          1 MNSCHLAFG--SADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRS--FVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~--~~~~~~   76 (221)
                      |||++|++|  +.|++|+|||+. +++++..+. |...|.+++|+|++.+++.+.++.+++|+..+++.+..  ...|..
T Consensus       143 pDg~~la~as~~~d~~i~iwd~~-~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~  220 (365)
T 4h5i_A          143 REGTVAAIASSKVPAIMRIIDPS-DLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNW  220 (365)
T ss_dssp             TTSSCEEEEESCSSCEEEEEETT-TTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTE
T ss_pred             CCCCEEEEEECCCCCEEEEeECC-CCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCC
Confidence            789987654  478999999998 777777776 78899999999976655444466777888777765543  356788


Q ss_pred             ceeEEEEeCCCCEEEEecCCC----eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         77 DKNFVGLATDGDYVACGSENN----SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      .|.+++|+|+++++++++.|+    .+++|++........         ....+.+|...|++++|+|+|++||+|+.|+
T Consensus       221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~  291 (365)
T 4h5i_A          221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL---------RSKQVTNRFKGITSMDVDMKGELAVLASNDN  291 (365)
T ss_dssp             EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE---------EEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred             CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce---------eeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence            899999999999999998877    688888766543221         1234567888999999999999999999999


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .|+|||+++++.+..+              +.+|...|++++|+|||++|+++|.|++|+||+++..
T Consensus       292 ~V~iwd~~~~~~~~~~--------------~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          292 SIALVKLKDLSMSKIF--------------KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             CEEEEETTTTEEEEEE--------------TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred             EEEEEECCCCcEEEEe--------------cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence            9999999988766543              2379999999999999999999999999999999753

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=9.1e-38  Score=229.59  Aligned_cols=208  Identities=15%  Similarity=0.245  Sum_probs=165.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCc---cceeeeccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPN---CLRSFVGHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~---~~~~~~~~~   75 (221)
                      |++++|++|+.|+.|++|++.... +.+..+.+|...|.+++|+|+ ..|++++.|+.|++||++++.   .+..+..|.
T Consensus        71 p~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~  150 (345)
T 3fm0_A           71 PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT  150 (345)
T ss_dssp             TTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC
T ss_pred             CCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC
Confidence            689999999999999999987332 567788999999999999984 569999999999999998764   345667899


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      ..|.+++|+|++++|++++.|+.|++||.+.++...           ...+.+|...|.+++|+|++++|++++.|+.|+
T Consensus       151 ~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~-----------~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~  219 (345)
T 3fm0_A          151 QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC-----------CATLEGHESTVWSLAFDPSGQRLASCSDDRTVR  219 (345)
T ss_dssp             SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE-----------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE-----------EEEecCCCCceEEEEECCCCCEEEEEeCCCeEE
Confidence            999999999999999999999999999987765432           234578999999999999999999999999999


Q ss_pred             EEEcCCCCceeeeeeeccccccccccccc-ccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNED-DTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      +||.........+..............+. .|...|.+++|+|++..|++++.|+.|++|+..++
T Consensus       220 iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~  284 (345)
T 3fm0_A          220 IWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN  284 (345)
T ss_dssp             EEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred             EeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence            99975433221111100001111111222 37788999999999999999999999999998653

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=4.5e-37  Score=226.60  Aligned_cols=190  Identities=13%  Similarity=0.141  Sum_probs=168.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC------ccceeeec
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP------NCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~------~~~~~~~~   73 (221)
                      ||+++|++|+.||.|++||.. +.+....+..|...|.+++|+|+ ..+++++.|+.+++|++...      .....+..
T Consensus        74 ~d~~~l~s~s~Dg~v~vWd~~-~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~  152 (354)
T 2pbi_B           74 KDKRRIVSSSQDGKVIVWDSF-TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM  152 (354)
T ss_dssp             TTSSEEEEEETTSEEEEEETT-TCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEE
T ss_pred             CCCCEEEEEeCCCeEEEEECC-CCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeec
Confidence            688999999999999999997 66777888889999999999985 56899999999999998643      34456678


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec--CCCEEEEecCC
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT--DGDYVACGSEN  151 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d  151 (221)
                      |...|.+++|+|++..+++++.|+.|++||+++++.+..             +.+|...+.+++|+|  ++++|++|+.|
T Consensus       153 h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~-------------~~~h~~~v~~~~~~~~~~g~~l~sgs~D  219 (354)
T 2pbi_B          153 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQS-------------FHGHGADVLCLDLAPSETGNTFVSGGCD  219 (354)
T ss_dssp             CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEE-------------EECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred             cCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEE-------------EcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence            999999999999999999999999999999998887665             478899999999987  57899999999


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      |.|++||+++++.+..+.               .|...|++++|+|++++|++++.|+.|++||++++
T Consensus       220 g~v~~wd~~~~~~~~~~~---------------~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~  272 (354)
T 2pbi_B          220 KKAMVWDMRSGQCVQAFE---------------THESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD  272 (354)
T ss_dssp             SCEEEEETTTCCEEEEEC---------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             CeEEEEECCCCcEEEEec---------------CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence            999999999887665543               68889999999999999999999999999999764

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=4.2e-37  Score=229.75  Aligned_cols=209  Identities=16%  Similarity=0.286  Sum_probs=167.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ||+++|++|+.|+.|++||+. +++.+..+.+|...|.+++|+|+ ..|++++.|++|++||+++++....+. +...+.
T Consensus       133 ~dg~~l~s~~~d~~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~  210 (393)
T 1erj_A          133 PDGKFLATGAEDRLIRIWDIE-NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVT  210 (393)
T ss_dssp             TTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEE
T ss_pred             CCCCEEEEEcCCCeEEEEECC-CCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcE
Confidence            689999999999999999998 77888899999999999999974 569999999999999999998877765 567799


Q ss_pred             EEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         80 FVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      +++|+| +++++++++.|+.|++||+++++.+..+...      .....+|...|.+++|+|++++|++|+.|+.|++||
T Consensus       211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~------~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd  284 (393)
T 1erj_A          211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE------NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN  284 (393)
T ss_dssp             EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccc------ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence            999999 8899999999999999999998876654211      112246888999999999999999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++...........   ........+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus       285 ~~~~~~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~  343 (393)
T 1erj_A          285 LQNANNKSDSKTP---NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN  343 (393)
T ss_dssp             C------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred             CCCCCCcccccCC---CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe
Confidence            9865432221100   0011122345788899999999999999999999999999998764

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.8e-37  Score=228.98  Aligned_cols=205  Identities=14%  Similarity=0.188  Sum_probs=159.3

Q ss_pred             CCCceEEEEeC------CCeEEEEEecCCc---eeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccce--
Q psy10662          1 MNSCHLAFGSA------DHCVHYYDLRNTK---EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLR--   69 (221)
Q Consensus         1 ~~~~~l~~~~~------dg~i~i~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~--   69 (221)
                      |||++||+|+.      |+.|++|+.....   ........|...|.+++|+|++.+++++.||+|++||+.+++...  
T Consensus        52 pDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~  131 (357)
T 4g56_B           52 RDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVN  131 (357)
T ss_dssp             SSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCC
T ss_pred             CCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEE
Confidence            79999999997      7889999876221   223445679999999999999999999999999999998876543  


Q ss_pred             --eeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE------------------------------eec
Q psy10662         70 --SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR------------------------------FDT  117 (221)
Q Consensus        70 --~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------------------------------~~~  117 (221)
                        ...+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.                              |+.
T Consensus       132 ~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~  211 (357)
T 4g56_B          132 KFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDT  211 (357)
T ss_dssp             CEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCT
T ss_pred             eeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEEC
Confidence              234788999999999999999999999999999999998877664                              122


Q ss_pred             ccceeEee--EEEeeCceEEEEEecC-CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEE
Q psy10662        118 VRSMLESS--FVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVC  194 (221)
Q Consensus       118 ~~~~~~~~--~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  194 (221)
                      ........  ...+...+.+++|+|+ +.+|++|+.|+.|++||+++++.+..+.               +|...|++++
T Consensus       212 ~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~---------------~~~~~v~~l~  276 (357)
T 4g56_B          212 RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA---------------VHSQNITGLA  276 (357)
T ss_dssp             TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC---------------CCSSCEEEEE
T ss_pred             CCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe---------------ccceeEEEEE
Confidence            22221111  1235567899999997 5688999999999999998877665543               6788999999


Q ss_pred             EcCCC-cEEEEecCCCeEEEEECCccc
Q psy10662        195 WRQLS-RVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       195 ~~~~~-~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |+|++ ++|++++.|+.|++||+++++
T Consensus       277 ~sp~~~~~lasgs~D~~i~iwd~~~~~  303 (357)
T 4g56_B          277 YSYHSSPFLASISEDCTVAVLDADFSE  303 (357)
T ss_dssp             ECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred             EcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence            99987 689999999999999999875

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1.3e-37  Score=226.18  Aligned_cols=196  Identities=20%  Similarity=0.273  Sum_probs=161.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCc--cceeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPN--CLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~   74 (221)
                      |+|++||+|+.|+.|+|||+.+.. ..+..+.+|.++|.+++|++   +..|++++.|++|++||+++++  ....+.+|
T Consensus        23 ~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h  102 (316)
T 3bg1_A           23 YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGH  102 (316)
T ss_dssp             GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCC
T ss_pred             CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCC
Confidence            578999999999999999998432 35678899999999999973   5779999999999999998874  45567789


Q ss_pred             ccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-----------
Q psy10662         75 INDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-----------  141 (221)
Q Consensus        75 ~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------  141 (221)
                      ...|.+++|+|+  +.+|++++.|+.|++||++......          ....+.+|...+.+++|+|+           
T Consensus       103 ~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~----------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~  172 (316)
T 3bg1_A          103 DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE----------VKKINNAHTIGCNAVSWAPAVVPGSLIDHPS  172 (316)
T ss_dssp             SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE----------ECCBTTSSSSCBCCCEECCCCCC------CC
T ss_pred             CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc----------eeeeeccccCCcceEEEccccCCcccccccc
Confidence            999999999998  7899999999999999987653211          11223567788999999987           


Q ss_pred             ------CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC----cEEEEecCCCeE
Q psy10662        142 ------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS----RVLVAANSQGII  211 (221)
Q Consensus       142 ------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i  211 (221)
                            +++|++|+.|+.|++||++......            ....+.+|...|.+++|+|++    ++|++++.|+.|
T Consensus       173 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~------------~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v  240 (316)
T 3bg1_A          173 GQKPNYIKRFASGGCDNLIKLWKEEEDGQWK------------EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV  240 (316)
T ss_dssp             SCCCCCCCBEECCBTTSBCCEEEECTTSCEE------------EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred             ccCccccceEEEecCCCeEEEEEeCCCCccc------------eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeE
Confidence                  4789999999999999986542211            112345789999999999987    899999999999


Q ss_pred             EEEECCc
Q psy10662        212 KIYVIPI  218 (221)
Q Consensus       212 ~iw~~~~  218 (221)
                      ++|++.+
T Consensus       241 ~iw~~~~  247 (316)
T 3bg1_A          241 FIWTCDD  247 (316)
T ss_dssp             EEEECSS
T ss_pred             EEEEccC
Confidence            9999875

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.8e-36  Score=221.81  Aligned_cols=220  Identities=20%  Similarity=0.334  Sum_probs=173.5

Q ss_pred             CC-CceEEEEeCCCeEEEEEecCC----ceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662          1 MN-SCHLAFGSADHCVHYYDLRNT----KEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         1 ~~-~~~l~~~~~dg~i~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~   74 (221)
                      |+ +++|++|+.||+|+|||+...    ..+...+.+|...|.+++|+|+ ..|++++.|+.|++|+............+
T Consensus        48 p~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~  127 (340)
T 4aow_A           48 PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGH  127 (340)
T ss_dssp             TTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCC
Confidence            55 689999999999999999732    2456778899999999999985 55889999999999999988888777778


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEE-----------EE---------------------eeccccee
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA-----------YR---------------------FDTVRSML  122 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-----------~~---------------------~~~~~~~~  122 (221)
                      ...+....+++++.++++++.|+.+++||+........           ..                     |+......
T Consensus       128 ~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~  207 (340)
T 4aow_A          128 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL  207 (340)
T ss_dssp             SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE
T ss_pred             CCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce
Confidence            88889999999999999999999999999765433211           11                     34455566


Q ss_pred             EeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee---------eecccccc----------------
Q psy10662        123 ESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------FDTVRSML----------------  177 (221)
Q Consensus       123 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~---------~~~~~~~~----------------  177 (221)
                      ...+.+|...|++++|+|++++|++|+.|+.|++||+++.+.+..+.         +.+.+..+                
T Consensus       208 ~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~  287 (340)
T 4aow_A          208 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGK  287 (340)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred             eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCC
Confidence            67778899999999999999999999999999999998877665443         11111000                


Q ss_pred             ---------cccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        178 ---------ERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       178 ---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                               ........|...|++++|+|+|++|++|+.||.|++||+.+|+
T Consensus       288 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          288 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence                     0011234678899999999999999999999999999999885

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=2.8e-37  Score=232.26  Aligned_cols=205  Identities=15%  Similarity=0.222  Sum_probs=173.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.||.|++||+. .++....+.+|.+.|.+++|+|+ ..|++++.|+.|++||+++++.+..+.+|...|.
T Consensus       107 ~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~  185 (420)
T 3vl1_A          107 LQMRRFILGTTEGDIKVLDSN-FNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVT  185 (420)
T ss_dssp             SSSCEEEEEETTSCEEEECTT-SCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEE
T ss_pred             cCCCEEEEEECCCCEEEEeCC-CcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEE
Confidence            588999999999999999998 67777777889999999999985 5699999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE-----------EeeCceEEEEEecCCCEEEEe
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV-----------GHINDKNFVGLATDGDYVACG  148 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~  148 (221)
                      +++|+|+++++++++.|+.|++||+++++.+..+.........+..+.           .+...+.+++|+|++++|+++
T Consensus       186 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  265 (420)
T 3vl1_A          186 DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG  265 (420)
T ss_dssp             EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE
T ss_pred             EEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE
Confidence            999999999999999999999999999998887743221111111111           124567778889999999999


Q ss_pred             cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECCccc
Q psy10662        149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.||.|++||+++++....+.              ..|...|.+++|+|+++ +|++++.||.|++||+.+++
T Consensus       266 ~~dg~i~i~d~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~  324 (420)
T 3vl1_A          266 HVSGVITVHNVFSKEQTIQLP--------------SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE  324 (420)
T ss_dssp             ETTSCEEEEETTTCCEEEEEC--------------CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred             cCCCeEEEEECCCCceeEEcc--------------cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence            999999999998877654442              25778899999999999 99999999999999998753

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=4.3e-37  Score=228.73  Aligned_cols=198  Identities=18%  Similarity=0.290  Sum_probs=156.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-----------------------------------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-----------------------------------   45 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------------------------   45 (221)
                      |++++|++|+.||+|+|||+. +++....+..|...|.+++|+|+                                   
T Consensus        76 p~~~~l~s~s~D~~v~iWd~~-~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  154 (380)
T 3iz6_a           76 PEKNWIVSASQDGRLIVWNAL-TSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLT  154 (380)
T ss_dssp             TTSSCEEEEETTSEEEEEETT-TTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCC
T ss_pred             CCCCEEEEEeCCCeEEEEECC-CCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeecc
Confidence            689999999999999999997 66666777766666666666542                                   


Q ss_pred             ----------------CcEEEecCCCcEEEEEcCCCccceee-----eccccceeEEEEeC-CCCEEEEecCCCeEEEEE
Q psy10662         46 ----------------EDIVSASTDSQLKLWNINKPNCLRSF-----VGHINDKNFVGLAT-DGDYVACGSENNSLYIYY  103 (221)
Q Consensus        46 ----------------~~l~s~~~d~~v~~wd~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd  103 (221)
                                      ..|++++.|++|++||+++++.+..+     .+|...|.+++|+| +++++++|+.|+.|++||
T Consensus       155 gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd  234 (380)
T 3iz6_a          155 GHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWD  234 (380)
T ss_dssp             CCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEE
T ss_pred             CCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEE
Confidence                            23666666777777777666665554     46788899999977 788999999999999999


Q ss_pred             CCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccc
Q psy10662        104 KGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRN  182 (221)
Q Consensus       104 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  182 (221)
                      ++.. +.+.             .+.+|...|.+++|+|++++|++|+.|+.|++||++++..+..+.....        .
T Consensus       235 ~~~~~~~~~-------------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~--------~  293 (380)
T 3iz6_a          235 LRITSRAVR-------------TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD--------R  293 (380)
T ss_dssp             TTTTCCCCE-------------EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCS--------S
T ss_pred             CCCCCcceE-------------EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccc--------c
Confidence            9743 4333             3578999999999999999999999999999999999887766542211        1


Q ss_pred             ccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        183 EDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       183 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ...+...|.+++|+|+|++|++|+.||.|++||+.+++
T Consensus       294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~  331 (380)
T 3iz6_a          294 NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE  331 (380)
T ss_dssp             SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC
T ss_pred             cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc
Confidence            11234468999999999999999999999999987653

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9e-37  Score=223.01  Aligned_cols=194  Identities=19%  Similarity=0.203  Sum_probs=153.1

Q ss_pred             ceEEEEeCCCeEEEEEecCC-ceeeEEE-Ee-ccCceEEEEEecC-CcEEEecCCCcEEEEEcCC-------Cccceeee
Q psy10662          4 CHLAFGSADHCVHYYDLRNT-KEALAVF-KG-HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINK-------PNCLRSFV   72 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~-~~~~~~~-~~-~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~-------~~~~~~~~   72 (221)
                      .+||+|+.|+.|++||+... ......+ .. |...|.+++|+|+ ..|++++.|++|++||++.       .+.+..+.
T Consensus        25 ~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~  104 (330)
T 2hes_X           25 GILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE  104 (330)
T ss_dssp             TEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC
T ss_pred             CEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc
Confidence            48999999999999999732 2445555 34 9999999999985 5588999999999999853       34556678


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      +|...|.+++|+|++++|++++.|+.|++||++....         ....+..+.+|...|.+++|+|++++|++++.|+
T Consensus       105 ~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~---------~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~  175 (330)
T 2hes_X          105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE---------EYECISVLQEHSQDVKHVIWHPSEALLASSSYDD  175 (330)
T ss_dssp             ----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC---------CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC---------CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence            8999999999999999999999999999999953211         0112334578999999999999999999999999


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC--CcEEEEecCCCeEEEEECCcc
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL--SRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .|++||...+...             ....+.+|...|.+++|+|+  +.+|++++.|+.|++|++.++
T Consensus       176 ~i~iW~~~~~~~~-------------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~  231 (330)
T 2hes_X          176 TVRIWKDYDDDWE-------------CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD  231 (330)
T ss_dssp             CEEEEEEETTEEE-------------EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred             eEEEEECCCCCee-------------EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence            9999998654211             11233478899999999998  778999999999999998653

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-37  Score=238.81  Aligned_cols=190  Identities=12%  Similarity=0.083  Sum_probs=161.0

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc----------eeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCc-ccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK----------EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN-CLRS   70 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~-~~~~   70 (221)
                      ++.+||+|+.||+|++||+....          ++...+.+|...|++++|++++.|++|+.||+|++||+++++ +...
T Consensus       224 ~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~  303 (524)
T 2j04_B          224 LVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFY  303 (524)
T ss_dssp             SSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEE
T ss_pred             CCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEE
Confidence            36799999999999999997321          123467889999999999987889999999999999998764 4456


Q ss_pred             eeccccceeEE--EEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC--ceEEEEEecCCCEE
Q psy10662         71 FVGHINDKNFV--GLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN--DKNFVGLATDGDYV  145 (221)
Q Consensus        71 ~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l  145 (221)
                      +.+|...|.++  .|+|++ .+|++++.|++|++||+++++.+..+             .+|..  .+.+++|+|+++.+
T Consensus       304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~-------------~~~~~~~~v~~v~fsp~~~~l  370 (524)
T 2j04_B          304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT-------------VSRFRGSNLVPVVYCPQIYSY  370 (524)
T ss_dssp             EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE-------------EEECSCCSCCCEEEETTTTEE
T ss_pred             eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc-------------ccccccCcccceEeCCCcCeE
Confidence            78899999999  578887 89999999999999999887665443             44543  47889999999999


Q ss_pred             EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++++.|+.|++||++++..+..+.               +|...|++++|+|+|++|++|+.||+|++|++..+
T Consensus       371 ~s~~~d~tv~lwd~~~~~~~~~l~---------------gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~  429 (524)
T 2j04_B          371 IYSDGASSLRAVPSRAAFAVHPLV---------------SRETTITAIGVSRLHPMVLAGSADGSLIITNAARR  429 (524)
T ss_dssp             EEECSSSEEEEEETTCTTCCEEEE---------------ECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred             EEeCCCCcEEEEECcccccceeee---------------cCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence            999999999999998876654443               68899999999999999999999999999998654

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=5.1e-36  Score=223.92  Aligned_cols=201  Identities=18%  Similarity=0.256  Sum_probs=164.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCccceee-------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPNCLRSF-------   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~~~~~~-------   71 (221)
                      |++++|++|+.|+.|++||+. +++....+. +...+.+++|+| + ..+++++.|+.|++||+++++.+..+       
T Consensus       175 p~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~  252 (393)
T 1erj_A          175 PSGDKLVSGSGDRTVRIWDLR-TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG  252 (393)
T ss_dssp             TTSSEEEEEETTSEEEEEETT-TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------
T ss_pred             CCCCEEEEecCCCcEEEEECC-CCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCC
Confidence            688999999999999999998 677766666 677899999997 4 56899999999999999998877665       


Q ss_pred             eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         72 VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      .+|...|.+++|+|+++++++++.|+.|++||++......... ..........+.+|...|.+++|+|++++|++|+.|
T Consensus       253 ~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D  331 (393)
T 1erj_A          253 TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK-TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD  331 (393)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT
T ss_pred             CCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc-CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC
Confidence            5688899999999999999999999999999998765432211 112233455677899999999999999999999999


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC------CCcEEEEecCCCeEEEEECCcc
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ------LSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      +.|++||+.+++.+..+.               +|...|.+++|++      ++++|++|+.||.|++|+++..
T Consensus       332 ~~v~iwd~~~~~~~~~l~---------------~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~  390 (393)
T 1erj_A          332 RGVLFWDKKSGNPLLMLQ---------------GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI  390 (393)
T ss_dssp             SEEEEEETTTCCEEEEEE---------------CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred             CeEEEEECCCCeEEEEEC---------------CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence            999999999887765553               7888999999986      6899999999999999998653

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-36  Score=222.14  Aligned_cols=200  Identities=16%  Similarity=0.210  Sum_probs=155.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecC------CceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC----ccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN------TKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP----NCLR   69 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~------~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~----~~~~   69 (221)
                      |++++|++|+.|+.|++||+..      ..+.+..+.+|...|.+++|+|+ .+|++++.|++|++||++..    +++.
T Consensus        68 p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~  147 (330)
T 2hes_X           68 PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECIS  147 (330)
T ss_dssp             TTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEE
T ss_pred             CCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEE
Confidence            6889999999999999999852      23566788899999999999985 56999999999999999532    4556


Q ss_pred             eeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC--CCEEEE
Q psy10662         70 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD--GDYVAC  147 (221)
Q Consensus        70 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~  147 (221)
                      .+.+|...|.+++|+|++.+|++++.|+.|++||..++..           ..+..+.+|...|.+++|+|+  +.+|++
T Consensus       148 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~-----------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s  216 (330)
T 2hes_X          148 VLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW-----------ECVAVLNGHEGTVWSSDFDKTEGVFRLCS  216 (330)
T ss_dssp             EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-----------EEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred             EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe-----------eEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence            7788999999999999999999999999999999865521           123346789999999999998  678999


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeeccccccccccccc-ccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED-DTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++.|+.|++||+..........       ......+. .|...|.+++|++++ +|++++.||.|++|+..++
T Consensus       217 ~s~D~~v~iw~~~~~~~~~~~~-------~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~  281 (330)
T 2hes_X          217 GSDDSTVRVWKYMGDDEDDQQE-------WVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG  281 (330)
T ss_dssp             EETTSCEEEEEEEEECTTSCEE-------EEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred             EeCCCeEEEEEecCCCccccce-------eEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence            9999999999986543211000       00111122 378899999999765 8999999999999998654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=5.8e-36  Score=217.05  Aligned_cols=192  Identities=19%  Similarity=0.341  Sum_probs=165.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.||.|++||+. +++.+..+.+|...|.+++|+|+ ..+++++.|+.|++||+++++.+..+..|..+|.
T Consensus        75 ~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~  153 (312)
T 4ery_A           75 SDSNLLVSASDDKTLKIWDVS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS  153 (312)
T ss_dssp             TTSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred             CCCCEEEEECCCCEEEEEECC-CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEE
Confidence            688999999999999999998 77888899999999999999984 5689999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++|+|+++++++++.|+.|++||+++++.+..+            ...+...+..++|+|++++|++++.|+.|++||+
T Consensus       154 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~  221 (312)
T 4ery_A          154 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------------IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY  221 (312)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE------------CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred             EEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE------------eccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence            9999999999999999999999999988776553            2344567889999999999999999999999999


Q ss_pred             CCCCceeeeeeeccccccccccccccccc---ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNE---FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++++.+..+.               +|..   .+......+++.+|++++.||.|++||+.+++
T Consensus       222 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~  270 (312)
T 4ery_A          222 SKGKCLKTYT---------------GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE  270 (312)
T ss_dssp             TTTEEEEEEC---------------SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred             CCCcEEEEEE---------------ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence            9887665543               2222   22233344688999999999999999998765

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=9.3e-38  Score=231.87  Aligned_cols=208  Identities=14%  Similarity=0.129  Sum_probs=159.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCc---cceeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPN---CLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~---~~~~~~~~   74 (221)
                      |++++|++|+.||.|++||+. ++  +.+..+.+|...|.+++|+|+ ..|++++.|+.|++||+.+++   ....+..|
T Consensus        21 ~~g~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~   99 (377)
T 3dwl_C           21 SQRTEFVTTTATNQVELYEQD-GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL   99 (377)
T ss_dssp             SSSSEEECCCSSSCBCEEEEE-TTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC
T ss_pred             CCCCEEEEecCCCEEEEEEcc-CCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc
Confidence            689999999999999999998 45  777888899999999999984 679999999999999999877   56667789


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEecCCCe
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      ...|.+++|+|++++|++++.|+.|++||+++++...          ....+.. |...|.+++|+|++++|++++.|+.
T Consensus       100 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~----------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~  169 (377)
T 3dwl_C          100 NRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW----------VSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK  169 (377)
T ss_dssp             SSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC----------CCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred             CCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce----------eeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence            9999999999999999999999999999998776310          1122345 8899999999999999999999999


Q ss_pred             EEEEEcCCCCceeeeeeeccc---ccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        154 LYIYYKGLSKHMHAYRFDTVR---SMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |++||+...+...........   ........+ +|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus       170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~  238 (377)
T 3dwl_C          170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE  238 (377)
T ss_dssp             EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred             EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence            999999754422111100000   011122233 788899999999999999999999999999998764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=3.6e-36  Score=234.59  Aligned_cols=182  Identities=21%  Similarity=0.384  Sum_probs=161.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ||+++|++++.|+.|++||..  ++.+..+.+|...|++++|+|+ ..|++++.|+.|++||. +++.+..+.+|...|.
T Consensus       395 ~dg~~l~~~~~d~~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~  471 (577)
T 2ymu_A          395 PDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVR  471 (577)
T ss_dssp             TTSSCEEEEETTSEEEEECTT--CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEE
T ss_pred             CCCCEEEEEeCCCEEEEEeCC--CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEE
Confidence            689999999999999999964  6778889999999999999985 56889999999999996 5677788889999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++|+|++++|++++.|+.|++||. +++.+..             +.+|...|++++|+|++++|++++.||.|++||.
T Consensus       472 ~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~-------------~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~  537 (577)
T 2ymu_A          472 GVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT-------------LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR  537 (577)
T ss_dssp             EEEECTTSCEEEEEETTSEEEEEET-TSCEEEE-------------EECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred             EEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEE-------------EeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence            9999999999999999999999995 4554443             5789999999999999999999999999999995


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                       +++.+..+               .+|...|++++|+|||++|++++.|+.|++||
T Consensus       538 -~~~~~~~~---------------~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          538 -NGQLLQTL---------------TGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             -TSCEEEEE---------------ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             -CCCEEEEE---------------cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence             44444433               37899999999999999999999999999997

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=5.9e-36  Score=215.71  Aligned_cols=197  Identities=17%  Similarity=0.167  Sum_probs=159.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCcc--ceeeeccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPNC--LRSFVGHI   75 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~~--~~~~~~~~   75 (221)
                      ++++|++|+.||+|++||+.+.. ..+..+..|...|.+++|+|   +..|++++.|+.|++||++++..  ...+.+|.
T Consensus        66 ~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~  145 (297)
T 2pm7_B           66 FGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA  145 (297)
T ss_dssp             GCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS
T ss_pred             cCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc
Confidence            37899999999999999998322 35667788999999999997   45699999999999999987632  34567899


Q ss_pred             cceeEEEEeCC-------------CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         76 NDKNFVGLATD-------------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        76 ~~v~~~~~~~~-------------~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                      ..|.+++|+|+             +++|++++.|+.|++||+++++....         ....+.+|...|.+++|+|++
T Consensus       146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~---------~~~~l~~H~~~V~~v~~sp~~  216 (297)
T 2pm7_B          146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV---------LESTLEGHSDWVRDVAWSPTV  216 (297)
T ss_dssp             SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE---------EEEEECCCSSCEEEEEECCCC
T ss_pred             CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE---------EEEEecCCCCceEEEEECCCC
Confidence            99999999997             46899999999999999876542211         223467899999999999984


Q ss_pred             ---CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        143 ---DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       143 ---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                         ++|++++.|+.|++||++.........          ......|...|.+++|+|+|++|++++.||.|++|+..
T Consensus       217 ~~~~~las~s~D~~v~iWd~~~~~~~~~~~----------~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          217 LLRSYMASVSQDRTCIIWTQDNEQGPWKKT----------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             SSSEEEEEEETTSCEEEEEESSTTSCCEEE----------ESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred             CCceEEEEEECCCcEEEEEeCCCCCcccee----------eeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence               899999999999999987643211000          00113567789999999999999999999999999986

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1.3e-35  Score=232.97  Aligned_cols=203  Identities=14%  Similarity=0.126  Sum_probs=172.9

Q ss_pred             CCCc-eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeee------
Q psy10662          1 MNSC-HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFV------   72 (221)
Q Consensus         1 ~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~------   72 (221)
                      |++. +|++|+.|+.|++||.. ..+....+.+|...|.+++|+|+ ..|++++.|++|++||+.+++.+..+.      
T Consensus       157 p~~~~~l~s~s~D~~v~lwd~~-~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~  235 (611)
T 1nr0_A          157 PSRPFRIISGSDDNTVAIFEGP-PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN  235 (611)
T ss_dssp             SSSSCEEEEEETTSCEEEEETT-TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS
T ss_pred             CCCCeEEEEEeCCCeEEEEECC-CCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccc
Confidence            4555 69999999999999987 67888899999999999999985 458999999999999999988877773      


Q ss_pred             -ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe------------------------------ecccce
Q psy10662         73 -GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF------------------------------DTVRSM  121 (221)
Q Consensus        73 -~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~------------------------------~~~~~~  121 (221)
                       +|.+.|.+++|+|++++|++++.|++|++||+++++.+..+..                              +.....
T Consensus       236 ~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~  315 (611)
T 1nr0_A          236 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGS  315 (611)
T ss_dssp             CSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTE
T ss_pred             cccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCC
Confidence             7999999999999999999999999999999999988776532                              222333


Q ss_pred             eEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE
Q psy10662        122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV  201 (221)
Q Consensus       122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  201 (221)
                      ....+.+|...|.+++|+|++++|++++.|+.|++||+.++.....+              ..+|...|.+++|++++ .
T Consensus       316 ~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~--------------~~~h~~~v~~~~~s~~~-~  380 (611)
T 1nr0_A          316 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF--------------PDVHATMITGIKTTSKG-D  380 (611)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS--------------SCSCSSCEEEEEECTTS-C
T ss_pred             cceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeec--------------ccCCcceEEEEEECCCC-c
Confidence            45566789999999999999999999999999999999877653322              13578899999999876 6


Q ss_pred             EEEecCCCeEEEEECCcc
Q psy10662        202 LVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       202 l~~~~~dg~i~iw~~~~~  219 (221)
                      |++++.|+.+++|++.++
T Consensus       381 l~s~s~d~~v~~w~~~~~  398 (611)
T 1nr0_A          381 LFTVSWDDHLKVVPAGGS  398 (611)
T ss_dssp             EEEEETTTEEEEECSSSS
T ss_pred             EEEEEcCCceEEeecCCc
Confidence            788899999999998754

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=5.6e-36  Score=238.25  Aligned_cols=193  Identities=17%  Similarity=0.219  Sum_probs=166.1

Q ss_pred             CceEEEEeCCCeEEEEEecCC----ceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNT----KEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      +++|++|+.|+.|++|++...    +.....+.+|...|.+++|+|+ ..|++|+.|++|++||+.+++.+..+.+|...
T Consensus       395 ~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~  474 (694)
T 3dm0_A          395 ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD  474 (694)
T ss_dssp             CSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred             CCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC
Confidence            578999999999999999732    2456678899999999999975 56899999999999999999999999999999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC--CEEEEecCCCeEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG--DYVACGSENNSLY  155 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~  155 (221)
                      |.+++|+|++++|++++.|+.|++||+.........          ....+|...|.+++|+|++  ..+++++.|+.|+
T Consensus       475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~----------~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~  544 (694)
T 3dm0_A          475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS----------EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK  544 (694)
T ss_dssp             EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC----------SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred             EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec----------cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEE
Confidence            999999999999999999999999998654332111          1123678889999999986  5899999999999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +||+++.+....+               .+|...|++++|+|++++|++++.||.|++||+.+++
T Consensus       545 vwd~~~~~~~~~~---------------~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~  594 (694)
T 3dm0_A          545 VWNLSNCKLRSTL---------------AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK  594 (694)
T ss_dssp             EEETTTCCEEEEE---------------CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred             EEECCCCcEEEEE---------------cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence            9999887665444               3788899999999999999999999999999998764

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=3.1e-35  Score=223.89  Aligned_cols=201  Identities=19%  Similarity=0.280  Sum_probs=177.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      ++++|++|+.||.|++||+. +++.+..+.+|.+.|.+++|+|++.+++++.||+|++||+++++.+..+.+|...|.++
T Consensus       131 ~~~~l~sgs~dg~i~vwd~~-~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l  209 (464)
T 3v7d_B          131 EDNYVITGADDKMIRVYDSI-NKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL  209 (464)
T ss_dssp             ETTEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred             CCCEEEEEcCCCcEEEEECC-CCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE
Confidence            57899999999999999998 78889999999999999999988899999999999999999999999999999999999


Q ss_pred             EEe--CCCCEEEEecCCCeEEEEECCCCeeeEE-----------------------E-----------------------
Q psy10662         82 GLA--TDGDYVACGSENNSLYIYYKGLSKHMHA-----------------------Y-----------------------  113 (221)
Q Consensus        82 ~~~--~~~~~l~~~~~d~~v~iwd~~~~~~~~~-----------------------~-----------------------  113 (221)
                      +|+  +++.++++++.|+.|++||+++.+....                       +                       
T Consensus       210 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  289 (464)
T 3v7d_B          210 DIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD  289 (464)
T ss_dssp             EEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred             EEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC
Confidence            998  5778999999999999999987653211                       0                       


Q ss_pred             ----EeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662        114 ----RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF  189 (221)
Q Consensus       114 ----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (221)
                          -|+......+..+.+|...+.+++|+|+++++++|+.||.|++||+++++.+..+.               +|...
T Consensus       290 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~---------------~h~~~  354 (464)
T 3v7d_B          290 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ---------------GHTAL  354 (464)
T ss_dssp             SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC---------------CCSSC
T ss_pred             CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe---------------CCCCc
Confidence                05556667777888899999999999999999999999999999999887665553               68889


Q ss_pred             eeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        190 VSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |.+++|+  +++|++++.||.|++||+.+++
T Consensus       355 v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~  383 (464)
T 3v7d_B          355 VGLLRLS--DKFLVSAAADGSIRGWDANDYS  383 (464)
T ss_dssp             EEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred             EEEEEEc--CCEEEEEeCCCcEEEEECCCCc
Confidence            9999997  5899999999999999998753

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=2.3e-35  Score=217.70  Aligned_cols=204  Identities=17%  Similarity=0.226  Sum_probs=168.4

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCccceee---eccccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPNCLRSF---VGHIND   77 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~~~~~~---~~~~~~   77 (221)
                      +.+|++|+.||.|++||+. +++.+..+.+|...|.+++|+| + ..|++++.||.|++||+++++.+..+   ..|...
T Consensus        85 ~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  163 (366)
T 3k26_A           85 HPLLAVAGSRGIIRIINPI-TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE  163 (366)
T ss_dssp             CEEEEEEETTCEEEEECTT-TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred             CCEEEEecCCCEEEEEEch-hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence            6799999999999999998 6788889999999999999998 4 45889999999999999999888877   679999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeE--------------------------------------EE------
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH--------------------------------------AY------  113 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--------------------------------------~~------  113 (221)
                      |.+++|+|+++++++++.|+.|++||+++++...                                      .+      
T Consensus       164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  243 (366)
T 3k26_A          164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDL  243 (366)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTE
T ss_pred             eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCE
Confidence            9999999999999999999999999998653221                                      01      


Q ss_pred             -----------Eeecccc--------------eeEeeEEEeeCceEEEEEecC--CCEEEEecCCCeEEEEEcCCCCcee
Q psy10662        114 -----------RFDTVRS--------------MLESSFVGHINDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMH  166 (221)
Q Consensus       114 -----------~~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~  166 (221)
                                 -|+....              .....+..|...+.+++|+|+  +++|++++.||.|++||+.+++...
T Consensus       244 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  323 (366)
T 3k26_A          244 ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHK  323 (366)
T ss_dssp             EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGG
T ss_pred             EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcc
Confidence                       0222221              335666778888999999999  9999999999999999998876543


Q ss_pred             eeeeeccccccccccccccc--ccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        167 AYRFDTVRSMLERDRNEDDT--NEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ...           ..+..|  ...|.+++|+|++++|++++.||.|++||+.+
T Consensus       324 ~~~-----------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  366 (366)
T 3k26_A          324 AKC-----------TTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR  366 (366)
T ss_dssp             CEE-----------EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             ccc-----------eEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence            111           011234  68899999999999999999999999999864

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=2e-36  Score=228.88  Aligned_cols=193  Identities=12%  Similarity=0.108  Sum_probs=156.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeee--cccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFV--GHIN   76 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~--~~~~   76 (221)
                      ++++||+|+.||.|+|||+.... .....+.+|.+.|++|+|+|  +..|++++.||+|++||+++........  .+..
T Consensus       131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~  210 (435)
T 4e54_B          131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINI  210 (435)
T ss_dssp             CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSC
T ss_pred             CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCc
Confidence            56799999999999999997322 23344568999999999997  4579999999999999997654433322  2334


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EEEEecCCCeEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YVACGSENNSLY  155 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~  155 (221)
                      .+.+++|+|++.+|++|+.||.|++||++.. .+             ..+.+|...|.+++|+|++. ++++++.|+.|+
T Consensus       211 ~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~-------------~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~  276 (435)
T 4e54_B          211 WFCSLDVSASSRMVVTGDNVGNVILLNMDGK-EL-------------WNLRMHKKKVTHVALNPCCDWFLATASVDQTVK  276 (435)
T ss_dssp             CCCCEEEETTTTEEEEECSSSBEEEEESSSC-BC-------------CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred             cEEEEEECCCCCEEEEEeCCCcEeeeccCcc-ee-------------EEEecccceEEeeeecCCCceEEEEecCcceee
Confidence            6789999999999999999999999998643 22             23568899999999999876 788999999999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +||+++.+....+            ....+|...|++++|+|+|++|++++.||.|++|++.++.
T Consensus       277 iwd~~~~~~~~~~------------~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~  329 (435)
T 4e54_B          277 IWDLRQVRGKASF------------LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD  329 (435)
T ss_dssp             EEETTTCCSSSCC------------SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred             EEecccccccceE------------EEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence            9999876543222            1224688899999999999999999999999999998754

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.9e-35  Score=220.77  Aligned_cols=219  Identities=10%  Similarity=0.097  Sum_probs=168.4

Q ss_pred             CCCce-EEEEeCCCeEEEEEecCC------ceeeE-----EEEe-------ccCceEEEEEecCCcEEEecCCCcEEEEE
Q psy10662          1 MNSCH-LAFGSADHCVHYYDLRNT------KEALA-----VFKG-------HRKAVSYVKFLNKEDIVSASTDSQLKLWN   61 (221)
Q Consensus         1 ~~~~~-l~~~~~dg~i~i~~~~~~------~~~~~-----~~~~-------~~~~i~~~~~~~~~~l~s~~~d~~v~~wd   61 (221)
                      |++++ |++|+.||.|++||+. .      .+.+.     .+.+       |...|.+++|+|++.+++++.|+.|++||
T Consensus       135 ~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d  213 (397)
T 1sq9_A          135 RLLSHRLVATDVKGTTYIWKFH-PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISE  213 (397)
T ss_dssp             ---CEEEEEEETTSCEEEEEEE-SSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEE
T ss_pred             CCCceEEEEEeCCCcEEEEeCC-ccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEE
Confidence            46788 9999999999999998 4      44555     6644       88999999999855888999999999999


Q ss_pred             cCCCccceeeec---c---ccceeEEEEeCCCCEEEEecCC---CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc
Q psy10662         62 INKPNCLRSFVG---H---INDKNFVGLATDGDYVACGSEN---NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND  132 (221)
Q Consensus        62 ~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (221)
                      +++++.+..+..   |   ...|.+++|+|++++|++++.|   +.|++||+++++.+..+...............|...
T Consensus       214 ~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (397)
T 1sq9_A          214 LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW  293 (397)
T ss_dssp             TTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred             CCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc
Confidence            999999988888   8   8999999999999999999999   999999999888776652100000000001118889


Q ss_pred             eEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccc------ccccccccccccccceeEEEEcCCC-------
Q psy10662        133 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVR------SMLERDRNEDDTNEFVSAVCWRQLS-------  199 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~-------  199 (221)
                      |.+++|+|++++|++++.||.|++||+++++.+..+......      ...........|...|.+++|+|++       
T Consensus       294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~  373 (397)
T 1sq9_A          294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA  373 (397)
T ss_dssp             EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTC
T ss_pred             EEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccc
Confidence            999999999999999999999999999998877766521100      0000011112348899999999998       


Q ss_pred             ---cEEEEecCCCeEEEEECCccc
Q psy10662        200 ---RVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       200 ---~~l~~~~~dg~i~iw~~~~~~  220 (221)
                         ++|++++.||.|++|++.+|+
T Consensus       374 ~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          374 DLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             TTSCEEEEEETTTEEEEEEEEC--
T ss_pred             cccceEEEecCCCcEEEEEcCCCC
Confidence               799999999999999998874

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.7e-34  Score=216.25  Aligned_cols=204  Identities=15%  Similarity=0.181  Sum_probs=170.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcC-CCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNIN-KPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~-~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.||.|++||+. +++.+..+..|...|.+++|+ +..+++++.||.|++||++ ....+..+..|...|.
T Consensus       144 ~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~  221 (401)
T 4aez_A          144 HDGSFLSVGLGNGLVDIYDVE-SQTKLRTMAGHQARVGCLSWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC  221 (401)
T ss_dssp             TTSSEEEEEETTSCEEEEETT-TCCEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred             CCCCEEEEECCCCeEEEEECc-CCeEEEEecCCCCceEEEEEC-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee
Confidence            688999999999999999998 678888999999999999995 4689999999999999998 4566777888999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------------------eecccceeEeeEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------------FDTVRSMLESSFV  127 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~  127 (221)
                      +++|+|++.++++++.|+.|++||+++++.+..+.                                |+.........+ 
T Consensus       222 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~-  300 (401)
T 4aez_A          222 GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV-  300 (401)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE-
T ss_pred             EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE-
Confidence            99999999999999999999999999887766553                                222222233333 


Q ss_pred             EeeCceEEEEEecCCCEEEE--ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662        128 GHINDKNFVGLATDGDYVAC--GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       128 ~~~~~v~~~~~~~~~~~l~~--~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                      .+...+.+++|+|+++++++  |+.||.|++||+.++.......             +.+|...|.+++|+|++++|+++
T Consensus       301 ~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~-------------~~~h~~~v~~~~~s~dg~~l~s~  367 (401)
T 4aez_A          301 DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVD-------------IPAHDTRVLYSALSPDGRILSTA  367 (401)
T ss_dssp             ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEE-------------EECCSSCCCEEEECTTSSEEEEE
T ss_pred             eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEE-------------ecCCCCCEEEEEECCCCCEEEEE
Confidence            35677999999999999998  5589999999998765444332             23678899999999999999999


Q ss_pred             cCCCeEEEEECCccc
Q psy10662        206 NSQGIIKIYVIPIRV  220 (221)
Q Consensus       206 ~~dg~i~iw~~~~~~  220 (221)
                      +.||.|++|++.+++
T Consensus       368 ~~dg~i~iw~~~~~~  382 (401)
T 4aez_A          368 ASDENLKFWRVYDGD  382 (401)
T ss_dssp             CTTSEEEEEECCC--
T ss_pred             eCCCcEEEEECCCCc
Confidence            999999999998765

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.2e-35  Score=217.28  Aligned_cols=197  Identities=15%  Similarity=0.201  Sum_probs=168.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecC-CceeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCc--cceeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN-TKEALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPN--CLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~   74 (221)
                      |++++|++|+.||.|++||+.. ..+.+..+.+|...|++++|++   +..|++++.||.|++||+++++  .+..+..|
T Consensus        21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  100 (379)
T 3jrp_A           21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH  100 (379)
T ss_dssp             SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred             CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCC
Confidence            6899999999999999999973 3466778889999999999974   5679999999999999999886  66777789


Q ss_pred             ccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec------------
Q psy10662         75 INDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT------------  140 (221)
Q Consensus        75 ~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------  140 (221)
                      ...|.+++|+|+  +.++++++.|+.|++||++..+....           ..+..|...+.+++|+|            
T Consensus       101 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~  169 (379)
T 3jrp_A          101 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-----------IIIDAHAIGVNSASWAPATIEEDGEHNGT  169 (379)
T ss_dssp             SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE-----------EEEECCTTCEEEEEECCCC----------
T ss_pred             CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee-----------EEecCCCCceEEEEEcCccccccccccCC
Confidence            999999999999  89999999999999999987644322           23467888999999999            


Q ss_pred             -CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC---CcEEEEecCCCeEEEEEC
Q psy10662        141 -DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL---SRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       141 -~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iw~~  216 (221)
                       ++.++++++.|+.|++||+++........           ..+.+|...|.+++|+|+   +++|++++.||.|++|++
T Consensus       170 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----------~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~  238 (379)
T 3jrp_A          170 KESRKFVTGGADNLVKIWKYNSDAQTYVLE-----------STLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ  238 (379)
T ss_dssp             CTTCEEEEEETTSCEEEEEEETTTTEEEEE-----------EEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred             CCCCEEEEEeCCCeEEEEEecCCCcceeeE-----------EEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence             69999999999999999998765432221           123468889999999999   899999999999999999


Q ss_pred             Ccc
Q psy10662        217 PIR  219 (221)
Q Consensus       217 ~~~  219 (221)
                      .++
T Consensus       239 ~~~  241 (379)
T 3jrp_A          239 DNE  241 (379)
T ss_dssp             SST
T ss_pred             CCC
Confidence            875

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.8e-36  Score=229.91  Aligned_cols=204  Identities=13%  Similarity=0.130  Sum_probs=161.2

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEE--EEecC--CcEEEecCCCcEEEEEcCCCccceeeecccc--
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYV--KFLNK--EDIVSASTDSQLKLWNINKPNCLRSFVGHIN--   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~--~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~--   76 (221)
                      +..|++|+.||+|++||+.....+...+.+|...|.++  +|+|+  ..|++++.|++|++||++++++...+.+|..  
T Consensus       277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~  356 (524)
T 2j04_B          277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS  356 (524)
T ss_dssp             SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred             CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC
Confidence            35799999999999999984445566788999999999  45664  4689999999999999999888887777754  


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      .|.+++|+|++..+++++.|+.|++||+++++.+..             +.+|...|++++|+|++++|++|+.||.|++
T Consensus       357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~-------------l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~l  423 (524)
T 2j04_B          357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHP-------------LVSRETTITAIGVSRLHPMVLAGSADGSLII  423 (524)
T ss_dssp             SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEE-------------EEECSSCEEEEECCSSCCBCEEEETTTEEEC
T ss_pred             cccceEeCCCcCeEEEeCCCCcEEEEECccccccee-------------eecCCCceEEEEeCCCCCeEEEEECCCEEEE
Confidence            488999999999999999999999999998776544             4689999999999999999999999999999


Q ss_pred             EEcCCCCc--------------eeeeeeecccc---------------cccccccccccccceeEEEEcCCCc---EEEE
Q psy10662        157 YYKGLSKH--------------MHAYRFDTVRS---------------MLERDRNEDDTNEFVSAVCWRQLSR---VLVA  204 (221)
Q Consensus       157 ~d~~~~~~--------------~~~~~~~~~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~  204 (221)
                      ||+.....              +..+.+.+.+.               .......+.+|...|.+++|+|++.   +|++
T Consensus       424 wd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAs  503 (524)
T 2j04_B          424 TNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAF  503 (524)
T ss_dssp             CBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEE
T ss_pred             EechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHh
Confidence            99754211              11233333221               0122345667899999999999954   9999


Q ss_pred             ecCCCeEEEEECCcc
Q psy10662        205 ANSQGIIKIYVIPIR  219 (221)
Q Consensus       205 ~~~dg~i~iw~~~~~  219 (221)
                      |+.||.|+||++...
T Consensus       504 g~~~g~vrlw~l~~~  518 (524)
T 2j04_B          504 SNSAGLLTLEYLSLE  518 (524)
T ss_dssp             ECTTSEEEEEECSCC
T ss_pred             hccCceEEEEEcccc
Confidence            999999999999753

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=3.1e-34  Score=209.46  Aligned_cols=189  Identities=14%  Similarity=0.287  Sum_probs=167.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |++++|++++.||.|++||+. .++  ....+..|...|.+++|+|+ ..+++++.|+.|++||+++++.+..+..|...
T Consensus       107 ~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~  185 (337)
T 1gxr_A          107 PDGCTLIVGGEASTLSIWDLA-APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG  185 (337)
T ss_dssp             TTSSEEEEEESSSEEEEEECC-CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred             CCCCEEEEEcCCCcEEEEECC-CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCc
Confidence            678999999999999999998 444  56677889999999999985 56889999999999999999999999889999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      +.+++|+|+++++++++.|+.|++||+++++.+..+              .+...+.+++|+|+++++++++.++.|++|
T Consensus       186 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~--------------~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~  251 (337)
T 1gxr_A          186 ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH--------------DFTSQIFSLGYCPTGEWLAVGMESSNVEVL  251 (337)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--------------ECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             eEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee--------------cCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence            999999999999999999999999999988876543              456789999999999999999999999999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |++..+...                ...|...|.+++|+|++++|++++.||.|++|++++++
T Consensus       252 ~~~~~~~~~----------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~  298 (337)
T 1gxr_A          252 HVNKPDKYQ----------------LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA  298 (337)
T ss_dssp             ETTSSCEEE----------------ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred             ECCCCCeEE----------------EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence            998765321                12577889999999999999999999999999998764

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.2e-35  Score=215.19  Aligned_cols=201  Identities=15%  Similarity=0.195  Sum_probs=170.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.||.|++||+. +++.+..+.+|...|.+++|+| +..|++++.||.|++||+.+++.+..+. +...+.
T Consensus        42 ~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~  119 (369)
T 3zwl_B           42 KEGDLLFSCSKDSSASVWYSL-NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVK  119 (369)
T ss_dssp             TTSCEEEEEESSSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEE
T ss_pred             CCCCEEEEEeCCCEEEEEeCC-CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeE
Confidence            689999999999999999998 7788899999999999999997 4569999999999999999999888887 888999


Q ss_pred             EEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC--ceEEEEEecCCCEEEEecCCC
Q psy10662         80 FVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN--DKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      +++|+|+++++++++.+     +.|.+||+...+....+..  ........+..+..  .+.+++|+|+++++++++.||
T Consensus       120 ~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg  197 (369)
T 3zwl_B          120 RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK--VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG  197 (369)
T ss_dssp             EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE--ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred             EEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc--cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence            99999999999999998     9999999876654333211  11122233455555  899999999999999999999


Q ss_pred             eEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        153 SLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       153 ~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .|++||+++ ......+.               .|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus       198 ~i~i~d~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  251 (369)
T 3zwl_B          198 KISKYDVSNNYEYVDSID---------------LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ  251 (369)
T ss_dssp             EEEEEETTTTTEEEEEEE---------------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred             EEEEEECCCCcEeEEEEe---------------cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc
Confidence            999999987 44444332               577889999999999999999999999999998764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=2.3e-34  Score=224.45  Aligned_cols=185  Identities=20%  Similarity=0.361  Sum_probs=162.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++|+.||.|++||..  ++.+..+.+|...|.+++|+|+ ..|++++.|+.|++||. +++.+..+.+|...|.
T Consensus       354 ~~g~~l~~~~~dg~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~  430 (577)
T 2ymu_A          354 PDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVW  430 (577)
T ss_dssp             TTSSEEEEEETTSEEEEEETT--CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEE
T ss_pred             CCCCEEEEEeCCCEEEEEcCC--CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeE
Confidence            689999999999999999964  6778889999999999999975 56899999999999995 6677888889999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++|+|+++++++++.|+.|++||.. ++.+.             .+.+|...|.+++|+|++++|++++.|+.|++||.
T Consensus       431 ~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~-------------~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~  496 (577)
T 2ymu_A          431 GVAFSPDDQTIASASDDKTVKLWNRN-GQLLQ-------------TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR  496 (577)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETT-SCEEE-------------EEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred             EEEECCCCCEEEEEcCCCEEEEEECC-CCEEE-------------EEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC
Confidence            99999999999999999999999964 33333             35788999999999999999999999999999995


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                       +++.+..+               .+|...|++++|+|+|++|++++.||.|++||...
T Consensus       497 -~~~~~~~~---------------~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~  539 (577)
T 2ymu_A          497 -NGQLLQTL---------------TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG  539 (577)
T ss_dssp             -TSCEEEEE---------------ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred             -CCCEEEEE---------------eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence             44444443               36888999999999999999999999999999754

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=3e-34  Score=213.51  Aligned_cols=192  Identities=14%  Similarity=0.158  Sum_probs=158.4

Q ss_pred             CCC-ceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCccceeeecc-
Q psy10662          1 MNS-CHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPNCLRSFVGH-   74 (221)
Q Consensus         1 ~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~-   74 (221)
                      |++ ++|++|+.||.|++||+. +++....+.  +|...|.+++|+| + ..|++++.|+.|++||+++ +.+..+..+ 
T Consensus        83 ~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~  160 (383)
T 3ei3_B           83 PTHPTTVAVGSKGGDIILWDYD-VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTD  160 (383)
T ss_dssp             SSCTTEEEEEEBTSCEEEEETT-STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCC
T ss_pred             CCCCCEEEEEcCCCeEEEEeCC-CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccC
Confidence            566 899999999999999998 555555554  6999999999998 3 5699999999999999986 444455433 


Q ss_pred             --ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EEEEecCC
Q psy10662         75 --INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YVACGSEN  151 (221)
Q Consensus        75 --~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d  151 (221)
                        ...|.+++|+|+++++++++.|+.|++||++ ++.+..             +.+|...|.+++|+|+++ ++++++.|
T Consensus       161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~-------------~~~h~~~v~~~~~~~~~~~~l~s~~~d  226 (383)
T 3ei3_B          161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFK-------------EKLHKAKVTHAEFNPRCDWLMATSSVD  226 (383)
T ss_dssp             CSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEE-------------EECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred             CCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEE-------------eccCCCcEEEEEECCCCCCEEEEEeCC
Confidence              4789999999999999999999999999984 444433             467889999999999999 99999999


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEECCccc
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.|++||+++.+......           .. .+|...|.+++|+| ++++|++++.|+.|++||+.+++
T Consensus       227 ~~i~iwd~~~~~~~~~~~-----------~~-~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~  284 (383)
T 3ei3_B          227 ATVKLWDLRNIKDKNSYI-----------AE-MPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS  284 (383)
T ss_dssp             SEEEEEEGGGCCSTTCEE-----------EE-EECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred             CEEEEEeCCCCCcccceE-----------EE-ecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence            999999998743211110           01 14778999999999 99999999999999999998754

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1.9e-35  Score=214.75  Aligned_cols=195  Identities=17%  Similarity=0.129  Sum_probs=156.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCcc---ceeeecc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPNC---LRSFVGH   74 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~---~~~~~~~   74 (221)
                      ++++|++|+.|++|++||+++.. +....+.+|...|.+++|+|+   ..|++++.|+.|++||++.+..   ...+.+|
T Consensus        70 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h  149 (316)
T 3bg1_A           70 YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH  149 (316)
T ss_dssp             GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS
T ss_pred             CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc
Confidence            47899999999999999998322 456677889999999999974   4699999999999999987632   3445678


Q ss_pred             ccceeEEEEeCC-----------------CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662         75 INDKNFVGLATD-----------------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG  137 (221)
Q Consensus        75 ~~~v~~~~~~~~-----------------~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  137 (221)
                      ...|.+++|+|+                 +++|++++.|+.|++||++.....          .....+.+|...|.+++
T Consensus       150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~----------~~~~~l~~h~~~V~~v~  219 (316)
T 3bg1_A          150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW----------KEEQKLEAHSDWVRDVA  219 (316)
T ss_dssp             SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE----------EEEECCBCCSSCEEEEE
T ss_pred             cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc----------ceeeecccCCCceEEEE
Confidence            889999999997                 468999999999999998754211          12234578999999999


Q ss_pred             EecCC----CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEE
Q psy10662        138 LATDG----DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI  213 (221)
Q Consensus       138 ~~~~~----~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  213 (221)
                      |+|++    ++|++++.|+.|++|+++......           .....+..|...|.+++|+|++++|++++.|+.|++
T Consensus       220 ~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~-----------~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~l  288 (316)
T 3bg1_A          220 WAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT-----------WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTL  288 (316)
T ss_dssp             CCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC-----------CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEE
T ss_pred             ecCCCCCCCceEEEEcCCCeEEEEEccCccccc-----------hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEE
Confidence            99986    789999999999999987632100           000011256788999999999999999999999999


Q ss_pred             EECC
Q psy10662        214 YVIP  217 (221)
Q Consensus       214 w~~~  217 (221)
                      |+..
T Consensus       289 w~~~  292 (316)
T 3bg1_A          289 WKES  292 (316)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            9975

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.7e-34  Score=216.17  Aligned_cols=193  Identities=15%  Similarity=0.207  Sum_probs=164.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc------eeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCccceee--
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK------EALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPNCLRSF--   71 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~------~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~--   71 (221)
                      ++++|++|+.||.|++||+....      +++..+.+|...|.+++|+|+  ..|++++.|+.|++||+++++.+..+  
T Consensus        93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  172 (402)
T 2aq5_A           93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP  172 (402)
T ss_dssp             CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred             CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence            78999999999999999998332      567889999999999999986  46899999999999999999998888  


Q ss_pred             eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc-eEEEEEecCCCEEEEe--
Q psy10662         72 VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND-KNFVGLATDGDYVACG--  148 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~--  148 (221)
                      ..|...|.+++|+|++++|++++.|+.|++||+++++.+..+            ...|... +.++.|+|+++++++|  
T Consensus       173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~g~~  240 (402)
T 2aq5_A          173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEK------------DRPHEGTRPVHAVFVSEGKILTTGFS  240 (402)
T ss_dssp             TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE------------ECSSCSSSCCEEEECSTTEEEEEEEC
T ss_pred             CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeee------------ccCCCCCcceEEEEcCCCcEEEEecc
Confidence            789999999999999999999999999999999988876553            1345554 8899999999999999  


Q ss_pred             -cCCCeEEEEEcCCCCce-eeeeeecccccccccccccccccceeEEEEcCCCcEEE-EecCCCeEEEEECCccc
Q psy10662        149 -SENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV-AANSQGIIKIYVIPIRV  220 (221)
Q Consensus       149 -~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~  220 (221)
                       +.|+.|++||+++.+.. ....              ..+...+.+++|+|++++|+ +++.||.|++|++.+++
T Consensus       241 ~~~d~~i~iwd~~~~~~~~~~~~--------------~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~  301 (402)
T 2aq5_A          241 RMSERQVALWDTKHLEEPLSLQE--------------LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA  301 (402)
T ss_dssp             TTCCEEEEEEETTBCSSCSEEEE--------------CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred             CCCCceEEEEcCccccCCceEEe--------------ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence             79999999999876542 1111              13556789999999999996 45579999999998764

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=2.4e-34  Score=212.85  Aligned_cols=210  Identities=14%  Similarity=0.149  Sum_probs=165.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCcccee--eeccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRS--FVGHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~--~~~~~   75 (221)
                      |++++|++|+.||.|++||+. +++  .+..+.+|...|.+++|+|+ ..|++++.|+.|++||+++++....  +..|.
T Consensus        18 ~~~~~l~~~~~d~~v~i~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~   96 (372)
T 1k8k_C           18 KDRTQIAICPNNHEVHIYEKS-GNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN   96 (372)
T ss_dssp             TTSSEEEEECSSSEEEEEEEE-TTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCS
T ss_pred             CCCCEEEEEeCCCEEEEEeCC-CCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCC
Confidence            689999999999999999998 555  78889999999999999974 5688999999999999988765443  35688


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      ..|.+++|+|+++++++++.|+.|++||++..+.....         ......|...+.+++|+|++++|++++.||.|+
T Consensus        97 ~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  167 (372)
T 1k8k_C           97 RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC---------KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCR  167 (372)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE---------EEECTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceee---------eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEE
Confidence            89999999999999999999999999998876532211         111245678999999999999999999999999


Q ss_pred             EEEcCCCCceeeee---eecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKHMHAYR---FDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +||++.........   +............+..|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus       168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  235 (372)
T 1k8k_C          168 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM  235 (372)
T ss_dssp             EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT
T ss_pred             EEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence            99975332111000   000000111222334688899999999999999999999999999998754

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=6.2e-34  Score=206.51  Aligned_cols=198  Identities=14%  Similarity=0.205  Sum_probs=154.5

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeee--------
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFV--------   72 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~--------   72 (221)
                      ++||+| .|++|+|||+. ++++++.+.  .|...|++++|+|+ ..|++|+.||+|++||+++++.+..+.        
T Consensus        37 ~~lAvg-~D~tV~iWd~~-tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~  114 (318)
T 4ggc_A           37 NVLAVA-LDNSVYLWSAS-SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS  114 (318)
T ss_dssp             SEEEEE-ETTEEEEEETT-TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred             CEEEEE-eCCEEEEEECC-CCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEE
Confidence            467776 59999999998 677777665  57788999999984 568999999999999998776544332        


Q ss_pred             ---------------------------------ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeee---------
Q psy10662         73 ---------------------------------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHM---------  110 (221)
Q Consensus        73 ---------------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~---------  110 (221)
                                                       +|...+..+.++++++++++++.|+.|++||+++++..         
T Consensus       115 ~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~  194 (318)
T 4ggc_A          115 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ  194 (318)
T ss_dssp             EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECC
T ss_pred             eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecc
Confidence                                             45666788888899999999999999999999865421         


Q ss_pred             -----EEEEe----------------------ecccceeEeeEEEeeCceEEEEEecCCCEEEEe--cCCCeEEEEEcCC
Q psy10662        111 -----HAYRF----------------------DTVRSMLESSFVGHINDKNFVGLATDGDYVACG--SENNSLYIYYKGL  161 (221)
Q Consensus       111 -----~~~~~----------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~~~d~~~  161 (221)
                           ....+                      +..... ......+...+..+.|+|+++.++++  +.|+.|++||+++
T Consensus       195 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~  273 (318)
T 4ggc_A          195 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT  273 (318)
T ss_dssp             CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred             cCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence                 11111                      111111 12233456678899999999887664  4799999999998


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++.+..+.               +|...|++++|+|+|++|++++.||+|++||+...
T Consensus       274 ~~~~~~l~---------------gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          274 MAKVAELK---------------GHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             CCEEEEEC---------------CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred             CcEEEEEc---------------CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence            88776653               78999999999999999999999999999998653

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=3.2e-34  Score=228.15  Aligned_cols=189  Identities=23%  Similarity=0.294  Sum_probs=161.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCcccee---eecccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRS---FVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~---~~~~~~   76 (221)
                      |++++|++|+.||.|+|||+. ++.....+.+|...|.+++|+| +..|++++.|++|++||+........   ..+|..
T Consensus       440 ~~g~~l~sgs~Dg~v~vwd~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~  518 (694)
T 3dm0_A          440 SDGQFALSGSWDGELRLWDLA-AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD  518 (694)
T ss_dssp             TTSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS
T ss_pred             CCCCEEEEEeCCCcEEEEECC-CCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC
Confidence            689999999999999999998 7788889999999999999997 45699999999999999865433222   146888


Q ss_pred             ceeEEEEeCCC--CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662         77 DKNFVGLATDG--DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus        77 ~v~~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      .|.+++|+|++  ..+++++.|+.|++||+++.+....             +.+|...|++++|+|++++|++|+.||.|
T Consensus       519 ~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~-------------~~~h~~~v~~v~~spdg~~l~sg~~Dg~i  585 (694)
T 3dm0_A          519 WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRST-------------LAGHTGYVSTVAVSPDGSLCASGGKDGVV  585 (694)
T ss_dssp             CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEE-------------ECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred             cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEE-------------EcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence            99999999987  5799999999999999988776544             47899999999999999999999999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++||+++++.+..+.                +...|.+++|+|++.+|++++ |+.|++||+.+++
T Consensus       586 ~iwd~~~~~~~~~~~----------------~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~  634 (694)
T 3dm0_A          586 LLWDLAEGKKLYSLE----------------ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS  634 (694)
T ss_dssp             EEEETTTTEEEECCB----------------CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTE
T ss_pred             EEEECCCCceEEEec----------------CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCC
Confidence            999999887654432                345689999999999888775 5669999998764

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.7e-35  Score=214.17  Aligned_cols=187  Identities=11%  Similarity=0.062  Sum_probs=153.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcC---------CCccceeee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNIN---------KPNCLRSFV   72 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~---------~~~~~~~~~   72 (221)
                      ++.+|++|+.||.|++||+. +++.+..+.  ...|.++.|+|.  +++++.|++|++|+..         +++.+..+.
T Consensus        47 d~~~l~sg~~Dg~v~iwd~~-~~~~~~~~~--~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~  121 (343)
T 3lrv_A           47 DKWVCMCRCEDGALHFTQLK-DSKTITTIT--TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE  121 (343)
T ss_dssp             EEEEEEEEEETTEEEEEEES-SSSCEEEEE--EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred             CCCEEEEECCCCcEEEEECC-CCcEEEEEe--cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence            57789999999999999998 666666666  466888888887  9999999999999765         344343332


Q ss_pred             -ccccceeEEEEeC--CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662         73 -GHINDKNFVGLAT--DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        73 -~~~~~v~~~~~~~--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                       .|..+|.+++|+|  +++++++++.||.|++||+++++.....            ...+...+.+++|+|++++|++|+
T Consensus       122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~------------~~~~~~~i~~~~~~pdg~~lasg~  189 (343)
T 3lrv_A          122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH------------SAKSDVEYSSGVLHKDSLLLALYS  189 (343)
T ss_dssp             CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE------------CCCSSCCCCEEEECTTSCEEEEEC
T ss_pred             cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE------------ecCCCCceEEEEECCCCCEEEEEc
Confidence             5668899999999  9999999999999999999988775432            123455799999999999999999


Q ss_pred             CCCeEEEEEcCCCCce-eeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        150 ENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       150 ~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .||.|++||+++++.. ..+.              ..|...|.+++|+|+|.+|++++ |+.|++||+++++
T Consensus       190 ~dg~i~iwd~~~~~~~~~~~~--------------~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~  246 (343)
T 3lrv_A          190 PDGILDVYNLSSPDQASSRFP--------------VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDV  246 (343)
T ss_dssp             TTSCEEEEESSCTTSCCEECC--------------CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSST
T ss_pred             CCCEEEEEECCCCCCCccEEe--------------ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCC
Confidence            9999999999887654 3332              13888999999999999999999 5599999998764

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.2e-33  Score=206.34  Aligned_cols=185  Identities=14%  Similarity=0.201  Sum_probs=165.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++|++++.||.|++||+. +++.+..+..|...|.+++|+|+ ..+++++.|+.|++||+++++.+..+. +...+.
T Consensus       151 ~~~~~l~~~~~dg~v~~~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~  228 (337)
T 1gxr_A          151 PDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIF  228 (337)
T ss_dssp             TTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEE
T ss_pred             CCCCEEEEEeCCCcEEEEeCC-CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceE
Confidence            578999999999999999998 67888889999999999999975 568899999999999999998877764 778899


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++|+|+++++++++.++.|++||+++++..              .+..|...+.+++|+|++++|++++.||.|++||+
T Consensus       229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~  294 (337)
T 1gxr_A          229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDKY--------------QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT  294 (337)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTSSCEE--------------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             EEEECCCCCEEEEEcCCCcEEEEECCCCCeE--------------EEcCCccceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence            9999999999999999999999999877643              23578889999999999999999999999999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      .+++.....                .|...|.+++|+|++++|++++.||.|++|++.
T Consensus       295 ~~~~~~~~~----------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  336 (337)
T 1gxr_A          295 PYGASIFQS----------------KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI  336 (337)
T ss_dssp             TTCCEEEEE----------------ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred             CCCeEEEEe----------------cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence            888765332                366789999999999999999999999999973

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-34  Score=216.35  Aligned_cols=205  Identities=12%  Similarity=0.197  Sum_probs=170.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecC---CceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCc------cce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN---TKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPN------CLR   69 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~---~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~------~~~   69 (221)
                      |++++|++|+.||.|++||+..   ..+.+..+..|...|.+++|+|+  ..|++++.|+.|++||+++++      ...
T Consensus        77 ~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  156 (416)
T 2pm9_A           77 HNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPL  156 (416)
T ss_dssp             SSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCB
T ss_pred             CCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccc
Confidence            6889999999999999999984   13577888899999999999974  569999999999999998876      332


Q ss_pred             e---eeccccceeEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEe----------------ecc-----------
Q psy10662         70 S---FVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRF----------------DTV-----------  118 (221)
Q Consensus        70 ~---~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----------------~~~-----------  118 (221)
                      .   +..|...|.+++|+|+ +.++++++.|+.|++||+++++.+..+..                .+.           
T Consensus       157 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  236 (416)
T 2pm9_A          157 TPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS  236 (416)
T ss_dssp             CCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred             ccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC
Confidence            2   3568889999999999 78999999999999999988776554432                111           


Q ss_pred             ------------cc-eeEeeEE-EeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662        119 ------------RS-MLESSFV-GHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE  183 (221)
Q Consensus       119 ------------~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
                                  .. .....+. +|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.              
T Consensus       237 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~--------------  302 (416)
T 2pm9_A          237 DNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP--------------  302 (416)
T ss_dssp             SSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE--------------
T ss_pred             CCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec--------------
Confidence                        10 2223344 6888999999999 99999999999999999999887766554              


Q ss_pred             cccccceeEEEEcCCC-cEEEEecCCCeEEEEECCccc
Q psy10662        184 DDTNEFVSAVCWRQLS-RVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       184 ~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~  220 (221)
                       .|...|.+++|+|++ ++|++++.||.|++|++.+++
T Consensus       303 -~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~  339 (416)
T 2pm9_A          303 -ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT  339 (416)
T ss_dssp             -CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred             -CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence             678889999999999 899999999999999998754

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=1e-33  Score=202.78  Aligned_cols=191  Identities=11%  Similarity=0.062  Sum_probs=147.9

Q ss_pred             CCceEEEEe--CCCeEEEEEecCCceeeEEEEeccCceEEEEEec----CCcEEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662          2 NSCHLAFGS--ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN----KEDIVSASTDSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         2 ~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      +++++.+++  .|+.|++|++.+.++.+..+..|...+..++|++    +..|++++.|++|++||++++++++.+.+|.
T Consensus       144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~  223 (356)
T 2w18_A          144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD  223 (356)
T ss_dssp             TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred             CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence            455555533  5999999999767888888899999999999986    2458899999999999999999999997654


Q ss_pred             ---cceeEEEEeCCCCEE------------EEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         76 ---NDKNFVGLATDGDYV------------ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        76 ---~~v~~~~~~~~~~~l------------~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                         ..+.+++|+|++.++            ++|+.|++|++||..+++.+..+.+...        .+|.....+.  +.
T Consensus       224 ~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p--------~Gh~~~~lsg--~~  293 (356)
T 2w18_A          224 SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLP--------PGQAGRFLEG--DV  293 (356)
T ss_dssp             ---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCC--------TTCCCCEEEE--EE
T ss_pred             cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeecc--------CCCcceeEcc--cc
Confidence               357778999999876            5678899999999999988765422210        1333333333  33


Q ss_pred             CCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccccee-EEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        141 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVS-AVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       141 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ++.++++++.|++|+|||+.+++.+..+.               +|...+. .++|+|||++|++|+.|++|++||+.
T Consensus       294 sg~~lASgS~DgTIkIWDl~tGk~l~tL~---------------gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~  356 (356)
T 2w18_A          294 KDHCAAAILTSGTIAIWDLLLGQCTALLP---------------PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS  356 (356)
T ss_dssp             ETTEEEEEETTSCEEEEETTTCSEEEEEC---------------CC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred             CCCEEEEEcCCCcEEEEECCCCcEEEEec---------------CCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence            47899999999999999999999887764               5655544 58999999999999999999999963

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=7.2e-34  Score=215.20  Aligned_cols=206  Identities=11%  Similarity=0.180  Sum_probs=159.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce-----------eeEEEEecc------------CceEEEEEecC---CcEEEecCC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE-----------ALAVFKGHR------------KAVSYVKFLNK---EDIVSASTD   54 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~-----------~~~~~~~~~------------~~i~~~~~~~~---~~l~s~~~d   54 (221)
                      |++++||+|+.||.|+|||+. ..+           ....+.+|.            +.|.+++|+|+   ..|++++.|
T Consensus        38 ~~g~~la~g~~dg~v~iw~~~-~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d  116 (447)
T 3dw8_B           38 HSGELLATGDKGGRVVIFQQE-QENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND  116 (447)
T ss_dssp             SSSSEEEEEETTSEEEEEEEC-C-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred             CCCCEEEEEcCCCeEEEEEec-CCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence            689999999999999999998 333           577888998            88999999985   469999999


Q ss_pred             CcEEEEEcCCCccc---------------------------------------ee-eeccccceeEEEEeCCCCEEEEec
Q psy10662         55 SQLKLWNINKPNCL---------------------------------------RS-FVGHINDKNFVGLATDGDYVACGS   94 (221)
Q Consensus        55 ~~v~~wd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~~~~~~l~~~~   94 (221)
                      +.|++||+.+++..                                       .. ..+|...|.+++|+|++++|+++ 
T Consensus       117 ~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-  195 (447)
T 3dw8_B          117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-  195 (447)
T ss_dssp             SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-
T ss_pred             CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-
Confidence            99999999764331                                       12 35789999999999999999998 


Q ss_pred             CCCeEEEEECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC-CEEEEecCCCeEEEEEcCCCCc----eeee
Q psy10662         95 ENNSLYIYYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKH----MHAY  168 (221)
Q Consensus        95 ~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~----~~~~  168 (221)
                      .|+.|++||+++ .+.+..+....      ..+.+|...|.+++|+|++ ++|++|+.||.|++||+++++.    ...+
T Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  269 (447)
T 3dw8_B          196 DDLRINLWHLEITDRSFNIVDIKP------ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLF  269 (447)
T ss_dssp             CSSEEEEEETTEEEEEEEEEECCC------SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEE
T ss_pred             CCCeEEEEECCCCCceeeeeeccc------ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEe
Confidence            799999999984 33333221110      1245788899999999998 9999999999999999998775    3333


Q ss_pred             eeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        169 RFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .....   ......+..|...|.+++|+|+|++|++++. +.|++||+++
T Consensus       270 ~~~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~  315 (447)
T 3dw8_B          270 EEPED---PSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM  315 (447)
T ss_dssp             CCC--------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred             ccCCC---ccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence            21110   0001112234458999999999999999998 9999999986

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-33  Score=211.57  Aligned_cols=202  Identities=13%  Similarity=0.254  Sum_probs=168.0

Q ss_pred             CCCc-eEEEEeCCCeEEEEEe----cCCce------eeEEEEe----------ccCceEEEEEecC-CcEEEecCCCcEE
Q psy10662          1 MNSC-HLAFGSADHCVHYYDL----RNTKE------ALAVFKG----------HRKAVSYVKFLNK-EDIVSASTDSQLK   58 (221)
Q Consensus         1 ~~~~-~l~~~~~dg~i~i~~~----~~~~~------~~~~~~~----------~~~~i~~~~~~~~-~~l~s~~~d~~v~   58 (221)
                      |+++ +||+|+.||.|++|++    . +++      ....+..          |.+.|++++|+|+ ..|++++.||.|+
T Consensus        55 ~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~  133 (425)
T 1r5m_A           55 PLDESILAYGEKNSVARLARIVETDQ-EGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELR  133 (425)
T ss_dssp             SSCTTEEEEEETBTEEEEEEEEEC-------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCCCcEEEEecCCceEEEEEEecccC-CccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEE
Confidence            6788 9999999999999999    6 444      4455554          6789999999985 5689999999999


Q ss_pred             EEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEee----------------------
Q psy10662         59 LWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD----------------------  116 (221)
Q Consensus        59 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~----------------------  116 (221)
                      +|| .+++.+..+..|...|.+++|+|+++++++++.|+.|++||+.+++.+..+...                      
T Consensus       134 i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (425)
T 1r5m_A          134 LWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDV  212 (425)
T ss_dssp             EEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCC
T ss_pred             EEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEE
Confidence            999 677888888889999999999999999999999999999999998877655322                      


Q ss_pred             ---------------------cccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccc
Q psy10662        117 ---------------------TVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS  175 (221)
Q Consensus       117 ---------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~  175 (221)
                                           .........+..|...+.+++|+|++++|++++.|+.|++||+++++....+.      
T Consensus       213 ~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------  286 (425)
T 1r5m_A          213 EWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFY------  286 (425)
T ss_dssp             EEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEEC------
T ss_pred             EEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEec------
Confidence                                 22223334566788899999999999999999999999999998876655442      


Q ss_pred             cccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        176 MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                               .|...|.+++|+|++ +|++++.|+.|++||+.+++
T Consensus       287 ---------~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~  321 (425)
T 1r5m_A          287 ---------GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT  321 (425)
T ss_dssp             ---------CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE
T ss_pred             ---------CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc
Confidence                     577889999999999 99999999999999998764

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=5.6e-34  Score=212.75  Aligned_cols=200  Identities=13%  Similarity=0.227  Sum_probs=163.6

Q ss_pred             ceEEEEeCCCeEEEEEecCCcee-----eEEEEec-----cCceEEEEEe----c-CCc-EEEecCCCcEEEEEcCC---
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEA-----LAVFKGH-----RKAVSYVKFL----N-KED-IVSASTDSQLKLWNINK---   64 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~-----~~~~~~~-----~~~i~~~~~~----~-~~~-l~s~~~d~~v~~wd~~~---   64 (221)
                      ++|++++.||.|++|++. .++.     ...+..|     ...|.+++|+    | +.. |++++.||.|++||+++   
T Consensus        82 ~~l~s~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  160 (397)
T 1sq9_A           82 CLVATTSFSGDLLFYRIT-REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD  160 (397)
T ss_dssp             EEEEEEETTSCEEEEEEE-ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred             cEEEEEcCCCCEEEEEcc-CCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccc
Confidence            899999999999999998 4554     7778888     5899999999    7 456 88999999999999998   


Q ss_pred             ---Cccce-----eee-------ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEE-
Q psy10662         65 ---PNCLR-----SFV-------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG-  128 (221)
Q Consensus        65 ---~~~~~-----~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-  128 (221)
                         ++.+.     .+.       .|...|.+++|+|++ ++++++.|+.|++||+++++.+..+             .. 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-------------~~~  226 (397)
T 1sq9_A          161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF-------------ESQ  226 (397)
T ss_dssp             HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE-------------ECC
T ss_pred             ccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE-------------ecc
Confidence               77776     663       378899999999999 9999999999999999988877654             45 


Q ss_pred             --e---eCceEEEEEecCCCEEEEecCC---CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662        129 --H---INDKNFVGLATDGDYVACGSEN---NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR  200 (221)
Q Consensus       129 --~---~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  200 (221)
                        |   ...+.+++|+|++++|++++.|   +.|++||+++++.+..+.......  ........|...|.+++|+|+++
T Consensus       227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~  304 (397)
T 1sq9_A          227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS--QASLGEFAHSSWVMSLSFNDSGE  304 (397)
T ss_dssp             C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC----------CCBSBSSCEEEEEECSSSS
T ss_pred             ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccc--cccccccccCCcEEEEEECCCCC
Confidence              7   8899999999999999999999   999999999887766553110000  00000112788999999999999


Q ss_pred             EEEEecCCCeEEEEECCccc
Q psy10662        201 VLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       201 ~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +|++++.||.|++||+.+++
T Consensus       305 ~l~~~~~dg~i~iwd~~~~~  324 (397)
T 1sq9_A          305 TLCSAGWDGKLRFWDVKTKE  324 (397)
T ss_dssp             EEEEEETTSEEEEEETTTTE
T ss_pred             EEEEEeCCCeEEEEEcCCCc
Confidence            99999999999999998764

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=3e-34  Score=211.79  Aligned_cols=198  Identities=16%  Similarity=0.193  Sum_probs=160.8

Q ss_pred             CceEEEEeCCCeEEEEEecCCcee-eEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEA-LAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      |++|++|+.||.|++||+...+.. ...+.+|...|.+++|+|+ ..|++++.||.|++||+++++.+. +..|...|.+
T Consensus        54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~  132 (368)
T 3mmy_A           54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKT  132 (368)
T ss_dssp             SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEE
T ss_pred             ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEE
Confidence            799999999999999999852444 4788899999999999985 569999999999999999888766 4569999999


Q ss_pred             EEE--eCCCCEEEEecCCCeEEEEECCCCeeeEEEEee------------------------------------------
Q psy10662         81 VGL--ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD------------------------------------------  116 (221)
Q Consensus        81 ~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------------------------------------------  116 (221)
                      ++|  +|++.++++++.|+.|++||+++++.+..+...                                          
T Consensus       133 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  212 (368)
T 3mmy_A          133 IHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLK  212 (368)
T ss_dssp             EEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCS
T ss_pred             EEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhcccccc
Confidence            999  899999999999999999999888765544311                                          


Q ss_pred             --------------------------------cccc---eeEeeEEEeeC------------ceEEEEEecCCCEEEEec
Q psy10662        117 --------------------------------TVRS---MLESSFVGHIN------------DKNFVGLATDGDYVACGS  149 (221)
Q Consensus       117 --------------------------------~~~~---~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~  149 (221)
                                                      ....   .....+..|..            .|.+++|+|++++|++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~  292 (368)
T 3mmy_A          213 HQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG  292 (368)
T ss_dssp             SCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE
T ss_pred             CCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc
Confidence                                            0000   11123334443            699999999999999999


Q ss_pred             CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        150 ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       150 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      .||.|++||+.+++.+..+               ..|...|.+++|+|+|++|++++.|+..+.|++
T Consensus       293 ~dg~i~iwd~~~~~~~~~~---------------~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~  344 (368)
T 3mmy_A          293 SDGRFSFWDKDARTKLKTS---------------EQLDQPISACCFNHNGNIFAYASSYDWSKGHEF  344 (368)
T ss_dssp             TTSCEEEEETTTTEEEEEC---------------CCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred             cCCeEEEEECCCCcEEEEe---------------cCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence            9999999999887765544               267889999999999999999998875555443

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-33  Score=209.86  Aligned_cols=196  Identities=17%  Similarity=0.177  Sum_probs=163.3

Q ss_pred             CceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCcc--ceeeeccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPNC--LRSFVGHI   75 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~--~~~~~~~~   75 (221)
                      +++|++|+.||.|++||+. .++  .+..+..|...|.+++|+|+   ..+++++.|+.|++||+++...  ...+..|.
T Consensus        69 ~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~  147 (379)
T 3jrp_A           69 GTILASCSYDGKVLIWKEE-NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA  147 (379)
T ss_dssp             CSEEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT
T ss_pred             CCEEEEeccCCEEEEEEcC-CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC
Confidence            8999999999999999998 554  66777889999999999974   5699999999999999988743  34556789


Q ss_pred             cceeEEEEeC-------------CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-
Q psy10662         76 NDKNFVGLAT-------------DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-  141 (221)
Q Consensus        76 ~~v~~~~~~~-------------~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-  141 (221)
                      ..|.+++|+|             ++.++++++.|+.|++||+++++....         ....+.+|...|.+++|+|+ 
T Consensus       148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~h~~~v~~~~~sp~~  218 (379)
T 3jrp_A          148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV---------LESTLEGHSDWVRDVAWSPTV  218 (379)
T ss_dssp             TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEE---------EEEEECCCSSCEEEEEECCCC
T ss_pred             CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCccee---------eEEEEecccCcEeEEEECCCC
Confidence            9999999999             689999999999999999976543322         23345788999999999999 


Q ss_pred             --CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        142 --GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       142 --~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                        +++|++++.||.|++||++++.......          ......|...|.+++|+|++++|++++.||.|++|++..
T Consensus       219 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          219 LLRSYLASVSQDRTCIIWTQDNEQGPWKKT----------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             SSSEEEEEEETTSCEEEEEESSTTSCCEEE----------ESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred             CCCCeEEEEeCCCEEEEEeCCCCCccceee----------eeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence              8999999999999999998765322111          112235778899999999999999999999999999873

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-34  Score=215.48  Aligned_cols=217  Identities=10%  Similarity=0.142  Sum_probs=174.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCc---------------eEEEEEecCCcEEEecCCCcEEEEEcCCC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKA---------------VSYVKFLNKEDIVSASTDSQLKLWNINKP   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~---------------i~~~~~~~~~~l~s~~~d~~v~~wd~~~~   65 (221)
                      |++++|++++.||.|++||+. +++.+..+..+...               +.+++|+|++.+++++.|+.|++||++++
T Consensus       159 ~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~  237 (425)
T 1r5m_A          159 KDGTHIISMDVENVTILWNVI-SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK  237 (425)
T ss_dssp             TTSSEEEEEETTCCEEEEETT-TTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS
T ss_pred             CCCCEEEEEecCCeEEEEECC-CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC
Confidence            688999999999999999998 67788888877776               99999999999999999999999999999


Q ss_pred             ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE----------------------------eec
Q psy10662         66 NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR----------------------------FDT  117 (221)
Q Consensus        66 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------------------------~~~  117 (221)
                      +.+..+..|...|.+++|+|+++++++++.|+.|++||+++++.+..+.                            |+.
T Consensus       238 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~  317 (425)
T 1r5m_A          238 TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSL  317 (425)
T ss_dssp             SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEET
T ss_pred             ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEEC
Confidence            9998888999999999999999999999999999999998776555443                            444


Q ss_pred             ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc-----ccccccccccccccc--ce
Q psy10662        118 VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV-----RSMLERDRNEDDTNE--FV  190 (221)
Q Consensus       118 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~v  190 (221)
                      ........+..|...+.+++|+|++++|++++.||.|++||+.+............     .........+..|..  .|
T Consensus       318 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  397 (425)
T 1r5m_A          318 KQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYI  397 (425)
T ss_dssp             TTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCE
T ss_pred             CCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCce
Confidence            55556666777888999999999999999999999999999976651110000000     000112233446655  89


Q ss_pred             eEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        191 SAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       191 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+++|+|++++|++++.||.|++|+++.
T Consensus       398 ~~~~~s~~~~~l~~~~~dg~i~iw~~~g  425 (425)
T 1r5m_A          398 FDLSWNCAGNKISVAYSLQEGSVVAIPG  425 (425)
T ss_dssp             EEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred             EEEEccCCCceEEEEecCceEEEEeecC
Confidence            9999999999999999999999999863

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=3e-34  Score=215.74  Aligned_cols=190  Identities=17%  Similarity=0.246  Sum_probs=159.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecc---c-
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGH---I-   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~---~-   75 (221)
                      |++++|++|+.||.|++||+. +++.+..+.+|...|.+++|+|+ ..|++++.|+.|++||+++++.+..+..+   . 
T Consensus       149 ~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  227 (420)
T 3vl1_A          149 PSGEALISSSQDMQLKIWSVK-DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHD  227 (420)
T ss_dssp             TTSSEEEEEETTSEEEEEETT-TCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTC
T ss_pred             CCCCEEEEEeCCCeEEEEeCC-CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCC
Confidence            688999999999999999998 67788889999999999999985 56999999999999999999888877642   2 


Q ss_pred             --------------------cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662         76 --------------------NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF  135 (221)
Q Consensus        76 --------------------~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  135 (221)
                                          ..+.+++|+|+++++++++.||.|++||+++++.+..+            ...|...+.+
T Consensus       228 ~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~------------~~~~~~~v~~  295 (420)
T 3vl1_A          228 GVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQL------------PSKFTCSCNS  295 (420)
T ss_dssp             CEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEE------------CCTTSSCEEE
T ss_pred             CccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEc------------ccccCCCcee
Confidence                                34455556789999999999999999999988776553            2356788999


Q ss_pred             EEEecCCC-EEEEecCCCeEEEEEcCCCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEE
Q psy10662        136 VGLATDGD-YVACGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI  213 (221)
Q Consensus       136 ~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  213 (221)
                      ++|+|+++ +|++|+.||.|++||+++++. +..+.              ..|...|..+.+ +++++|++++.||.|++
T Consensus       296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~--------------~~~~~~v~~~~~-~~~~~l~s~~~d~~v~i  360 (420)
T 3vl1_A          296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL--------------INEGTPINNVYF-AAGALFVSSGFDTSIKL  360 (420)
T ss_dssp             EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE--------------ESTTSCEEEEEE-ETTEEEEEETTTEEEEE
T ss_pred             EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh--------------ccCCCCceEEEe-CCCCEEEEecCCccEEE
Confidence            99999999 999999999999999988653 33332              125667887755 57899999999999999


Q ss_pred             EECCc
Q psy10662        214 YVIPI  218 (221)
Q Consensus       214 w~~~~  218 (221)
                      |++..
T Consensus       361 w~~~~  365 (420)
T 3vl1_A          361 DIISD  365 (420)
T ss_dssp             EEECC
T ss_pred             EeccC
Confidence            99875

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=2.2e-33  Score=226.61  Aligned_cols=204  Identities=14%  Similarity=0.193  Sum_probs=173.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++.+|++|+.||.|+|||+. +++.+..+..|..+|.+++|+|+ ..|++++.||.|++||+.+++.+..+.+|...|.
T Consensus        23 p~~~~la~~~~~g~v~iwd~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~  101 (814)
T 3mkq_A           23 PTEPWVLTTLYSGRVEIWNYE-TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR  101 (814)
T ss_dssp             SSSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             CCCCEEEEEeCCCEEEEEECC-CCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE
Confidence            789999999999999999998 78888999999999999999984 5699999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCC-eeeEEEE----------eec--------------------ccceeEeeEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLS-KHMHAYR----------FDT--------------------VRSMLESSFVG  128 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~----------~~~--------------------~~~~~~~~~~~  128 (221)
                      +++|+|+++++++++.||.|++||+.++ .....+.          |.+                    ........+..
T Consensus       102 ~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~  181 (814)
T 3mkq_A          102 SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT  181 (814)
T ss_dssp             EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred             EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence            9999999999999999999999999876 3333322          222                    11111222233


Q ss_pred             e-eCceEEEEEec--CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662        129 H-INDKNFVGLAT--DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       129 ~-~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                      + ...+.+++|+|  ++.++++++.||.|++||+.+++....+.               +|...|.+++|+|++++|+++
T Consensus       182 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~  246 (814)
T 3mkq_A          182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE---------------GHMSNVSFAVFHPTLPIIISG  246 (814)
T ss_dssp             CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE---------------CCSSCEEEEEECSSSSEEEEE
T ss_pred             CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc---------------CCCCCEEEEEEcCCCCEEEEE
Confidence            3 37789999999  99999999999999999998877655553               577889999999999999999


Q ss_pred             cCCCeEEEEECCccc
Q psy10662        206 NSQGIIKIYVIPIRV  220 (221)
Q Consensus       206 ~~dg~i~iw~~~~~~  220 (221)
                      +.||.|++||+.+++
T Consensus       247 ~~dg~v~vwd~~~~~  261 (814)
T 3mkq_A          247 SEDGTLKIWNSSTYK  261 (814)
T ss_dssp             ETTSCEEEEETTTCS
T ss_pred             eCCCeEEEEECCCCc
Confidence            999999999998754

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-34  Score=234.76  Aligned_cols=213  Identities=11%  Similarity=0.118  Sum_probs=168.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      |++++||+|+.||.|+||+.. ..+....+ .|..+|.+++|+|+.+|++++.|++|++||+++++.+..+. |...|++
T Consensus        27 pdg~~lAsgs~Dg~I~lw~~~-~~~~~~~~-~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~  103 (902)
T 2oaj_A           27 FTQNLLAIATVTGEVHIYGQQ-QVEVVIKL-EDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITS  103 (902)
T ss_dssp             TTTTEEEEEETTSEEEEECST-TCEEEEEC-SSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEE
T ss_pred             CCCCEEEEEeCCCEEEEEeCC-CcEEEEEc-CCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEE
Confidence            789999999999999999987 55554444 47889999999996669999999999999999999888875 7788999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeE-eeEEEeeCceEEEEEecC-CCEEEEecCCCeEEEEE
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE-SSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYY  158 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d  158 (221)
                      ++|+|+++++++|+.||.|++||+++++.. .+....  .... ..+.+|...|.+++|+|+ +..+++|+.||.| +||
T Consensus       104 v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~--~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd  179 (902)
T 2oaj_A          104 IDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDN--LQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYS  179 (902)
T ss_dssp             EECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECC--HHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEE
T ss_pred             EEECCCCCEEEEEcCCCcEEEEECCCCccc-cceecc--ccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEE
Confidence            999999999999999999999999988753 221100  0000 123568889999999996 5789999999999 999


Q ss_pred             cCCCCceeeeeeeccccccc---ccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLE---RDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +++++....+..........   .......|...|.+++|+|+|++|++++.||.|++||+.+++
T Consensus       180 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~  244 (902)
T 2oaj_A          180 LVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH  244 (902)
T ss_dssp             TTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred             CCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence            99988776654321000000   001223566789999999999999999999999999998764

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-34  Score=217.23  Aligned_cols=206  Identities=13%  Similarity=0.169  Sum_probs=167.1

Q ss_pred             CC-CceEEEEeCCCeEEEEEecCCceeeEEEEec------cCceEEEEEecCC--cEEEecCCC---cEEEEEcCCC-cc
Q psy10662          1 MN-SCHLAFGSADHCVHYYDLRNTKEALAVFKGH------RKAVSYVKFLNKE--DIVSASTDS---QLKLWNINKP-NC   67 (221)
Q Consensus         1 ~~-~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~--~l~s~~~d~---~v~~wd~~~~-~~   67 (221)
                      |+ +.+|++++.||.|++||+. .++.+..+..|      ...|.+++|+|++  .+++++.|+   .|++||++++ +.
T Consensus       175 ~~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~  253 (416)
T 2pm9_A          175 QSLAHVFASAGSSNFASIWDLK-AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP  253 (416)
T ss_dssp             SSCTTEEEEESSSSCEEEEETT-TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC
T ss_pred             CCCCcEEEEEcCCCCEEEEECC-CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC
Confidence            45 6899999999999999998 67777888766      7899999999854  588999998   9999999986 56


Q ss_pred             ceeee-ccccceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC-CE
Q psy10662         68 LRSFV-GHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG-DY  144 (221)
Q Consensus        68 ~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~  144 (221)
                      +..+. +|...|.+++|+| ++.++++++.|+.|++||+++++.+..+             ..|...+.+++|+|++ .+
T Consensus       254 ~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~-------------~~~~~~v~~~~~s~~~~~~  320 (416)
T 2pm9_A          254 LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF-------------PARGNWCFKTKFAPEAPDL  320 (416)
T ss_dssp             SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE-------------ECSSSCCCCEEECTTCTTE
T ss_pred             cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee-------------cCCCCceEEEEECCCCCCE
Confidence            67777 8999999999999 8999999999999999999988776654             6788899999999998 89


Q ss_pred             EEEecCCCeEEEEEcCCCCceeeeee-------------eccc-------ccccccccccccccceeEEEEcCCCcEEEE
Q psy10662        145 VACGSENNSLYIYYKGLSKHMHAYRF-------------DTVR-------SMLERDRNEDDTNEFVSAVCWRQLSRVLVA  204 (221)
Q Consensus       145 l~~~~~d~~i~~~d~~~~~~~~~~~~-------------~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  204 (221)
                      |++++.|+.|++||+..........-             ....       ...........|..++.+++|+|+|++|++
T Consensus       321 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~  400 (416)
T 2pm9_A          321 FACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQI  400 (416)
T ss_dssp             EEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECB
T ss_pred             EEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEE
Confidence            99999999999999987664332210             0000       000001122236777889999999999999


Q ss_pred             ecCCCeEEEEECCccc
Q psy10662        205 ANSQGIIKIYVIPIRV  220 (221)
Q Consensus       205 ~~~dg~i~iw~~~~~~  220 (221)
                      ++.|+.|++|++.+.+
T Consensus       401 ~~~d~~v~~w~~~~~~  416 (416)
T 2pm9_A          401 TPDGKGVSITNPKISG  416 (416)
T ss_dssp             CTTSSCBCCBCCCCC-
T ss_pred             eCCCCeEEEEEeccCC
Confidence            9999999999998753

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=5.3e-34  Score=213.56  Aligned_cols=190  Identities=12%  Similarity=0.150  Sum_probs=160.3

Q ss_pred             EEEEeCCCeEEEEEecCCce---eeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCC-------ccceeeec
Q psy10662          6 LAFGSADHCVHYYDLRNTKE---ALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKP-------NCLRSFVG   73 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~---~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~-------~~~~~~~~   73 (221)
                      +++++.||.|+||++...++   .+..+.+|.+.|.+++|+| + ..|++++.||.|++||+.++       +.+..+.+
T Consensus        50 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~  129 (402)
T 2aq5_A           50 ICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG  129 (402)
T ss_dssp             EBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC
T ss_pred             EEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC
Confidence            44578899999999974443   3446778999999999998 4 56899999999999999887       56778889


Q ss_pred             cccceeEEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         74 HINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        74 ~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      |...|.+++|+|++ .++++++.|+.|++||+++++.+..+.           ...|...|.+++|+|++++|++++.|+
T Consensus       130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~l~~~~~d~  198 (402)
T 2aq5_A          130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG-----------PDVHPDTIYSVDWSRDGALICTSCRDK  198 (402)
T ss_dssp             CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-----------TTTCCSCEEEEEECTTSSCEEEEETTS
T ss_pred             CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-----------cCCCCCceEEEEECCCCCEEEEEecCC
Confidence            99999999999998 699999999999999999887765430           046788999999999999999999999


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccc-eeEEEEcCCCcEEEEe---cCCCeEEEEECCccc
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF-VSAVCWRQLSRVLVAA---NSQGIIKIYVIPIRV  220 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~---~~dg~i~iw~~~~~~  220 (221)
                      .|++||+++++.+..+.              ..|... +..++|+|++++|+++   +.|+.|++||+.+++
T Consensus       199 ~i~iwd~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~  256 (402)
T 2aq5_A          199 RVRVIEPRKGTVVAEKD--------------RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE  256 (402)
T ss_dssp             EEEEEETTTTEEEEEEE--------------CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred             cEEEEeCCCCceeeeec--------------cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence            99999999877665542              134443 8899999999999999   799999999998753

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.6e-34  Score=214.43  Aligned_cols=203  Identities=12%  Similarity=0.119  Sum_probs=153.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce---eeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCc---cceeeec
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE---ALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPN---CLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~---~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~---~~~~~~~   73 (221)
                      |++++|++|+.||.|++||+. .++   ....+..|...|.+++|+|+ ..|++++.|+.|++||+++++   ....+..
T Consensus        65 ~~~~~l~s~s~d~~v~vwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  143 (377)
T 3dwl_C           65 PKSNRIVTCSQDRNAYVYEKR-PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR  143 (377)
T ss_dssp             TTTCCEEEEETTSSEEEC-------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS
T ss_pred             CCCCEEEEEeCCCeEEEEEcC-CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec
Confidence            688999999999999999998 444   56667789999999999974 569999999999999999876   3666766


Q ss_pred             -cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---ee--cccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         74 -HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---FD--TVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        74 -~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                       |...|.+++|+|+++++++++.|+.|++||+...+......   +.  .........+ +|...|.+++|+|++++|++
T Consensus       144 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~  222 (377)
T 3dwl_C          144 PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAY  222 (377)
T ss_dssp             SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEE
T ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEE
Confidence             99999999999999999999999999999986443211100   00  0112334445 88899999999999999999


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ++.|+.|++||+.+++....           ....+..|...|.+++|+|++++|++++.++.+ +|+..
T Consensus       223 ~~~d~~i~iwd~~~~~~~~~-----------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~  280 (377)
T 3dwl_C          223 AGHDSSVTIAYPSAPEQPPR-----------ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN  280 (377)
T ss_dssp             EETTTEEC-CEECSTTSCEE-----------ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred             EeCCCcEEEEECCCCCCcce-----------eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence            99999999999988765111           012234688899999999999999999877766 66664

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6e-34  Score=215.32  Aligned_cols=207  Identities=12%  Similarity=0.124  Sum_probs=161.9

Q ss_pred             CCCceEEEEeCCCeEEEEEec--CCceeeEEEEe------------ccCceEEEEEe--c-CCcEEEecCCCcEEEEEcC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLR--NTKEALAVFKG------------HRKAVSYVKFL--N-KEDIVSASTDSQLKLWNIN   63 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~------------~~~~i~~~~~~--~-~~~l~s~~~d~~v~~wd~~   63 (221)
                      |++++|++|+.||.|++||+.  ..++....+..            +...+.++.+.  + +..+++++.|+.|++||++
T Consensus       121 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~  200 (437)
T 3gre_A          121 PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR  200 (437)
T ss_dssp             TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred             CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence            578999999999999999995  12333333332            34456666643  3 5569999999999999999


Q ss_pred             CCccceeeec--cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe--
Q psy10662         64 KPNCLRSFVG--HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA--  139 (221)
Q Consensus        64 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--  139 (221)
                      +++.+..+..  |...|.+++|+|+++++++++.||.|++||+++++.+..+.            ..|...|.+++|+  
T Consensus       201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------~~~~~~v~~~~~~~~  268 (437)
T 3gre_A          201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS------------FGDHAPITHVEVCQF  268 (437)
T ss_dssp             TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB------------CTTCEEEEEEEECTT
T ss_pred             CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe------------cCCCCceEEEEeccc
Confidence            9999998887  88999999999999999999999999999999988876641            1455678999655  


Q ss_pred             --cCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccc---------ccccccc--cccceeEEEEcCCCcEEEEec
Q psy10662        140 --TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE---------RDRNEDD--TNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       140 --~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~~~v~~~~~~~~~~~l~~~~  206 (221)
                        |++++|++++.||.|++||+++++.+..+.-........         ....+.+  |...|.+++|+ ++++|++++
T Consensus       269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~  347 (437)
T 3gre_A          269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE  347 (437)
T ss_dssp             TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred             cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecC
Confidence              568899999999999999999988777665221111000         0011233  88899999999 789999999


Q ss_pred             CCCeEEEEECCccc
Q psy10662        207 SQGIIKIYVIPIRV  220 (221)
Q Consensus       207 ~dg~i~iw~~~~~~  220 (221)
                      .||.|++||+.+++
T Consensus       348 ~d~~i~~wd~~~~~  361 (437)
T 3gre_A          348 ATSSIVMFSLNELS  361 (437)
T ss_dssp             GGTEEEEEETTCGG
T ss_pred             CCCeEEEEECCCcc
Confidence            99999999998765

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=7e-33  Score=206.14  Aligned_cols=203  Identities=12%  Similarity=0.043  Sum_probs=158.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEecc---CceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR---KAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~---~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      ++++|++++.|+.|++||+. . ..+..+..+.   ..|.+++|+|+ ..|++++.|+.|++||+ +++.+..+..|...
T Consensus       130 ~~~~l~s~~~d~~i~iwd~~-~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~  206 (383)
T 3ei3_B          130 NTNQLFVSSIRGATTLRDFS-G-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAK  206 (383)
T ss_dssp             EEEEEEEEETTTEEEEEETT-S-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSC
T ss_pred             CCCEEEEEeCCCEEEEEECC-C-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCc
Confidence            57899999999999999998 3 4455555444   78999999974 56999999999999999 57778888899999


Q ss_pred             eeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEE
Q psy10662         78 KNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLY  155 (221)
Q Consensus        78 v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~  155 (221)
                      |.+++|+|+++ ++++++.|+.|++||+++.+..         ...... .+|...+.+++|+| ++++|++++.|+.|+
T Consensus       207 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---------~~~~~~-~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~  276 (383)
T 3ei3_B          207 VTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK---------NSYIAE-MPHEKPVNAAYFNPTDSTKLLTTDQRNEIR  276 (383)
T ss_dssp             EEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST---------TCEEEE-EECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred             EEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc---------cceEEE-ecCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence            99999999999 8999999999999999873211         111122 36889999999999 999999999999999


Q ss_pred             EEEcCCCCceeeeeeecc----------------------------------cc--------cccccccccc--ccccee
Q psy10662        156 IYYKGLSKHMHAYRFDTV----------------------------------RS--------MLERDRNEDD--TNEFVS  191 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~----------------------------------~~--------~~~~~~~~~~--~~~~v~  191 (221)
                      +||+++.+....+.....                                  ..        .......+.+  |...+.
T Consensus       277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~  356 (383)
T 3ei3_B          277 VYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIIS  356 (383)
T ss_dssp             EEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCC
T ss_pred             EEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEE
Confidence            999988766444331100                                  00        0011122222  456677


Q ss_pred             EEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        192 AVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .++|+|++++|++++ ||.|++|++++
T Consensus       357 ~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          357 LNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             EEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             EEEEecCccEEEEec-CCcEEEEecCC
Confidence            789999999999997 99999999975

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=5.8e-34  Score=209.68  Aligned_cols=211  Identities=10%  Similarity=0.100  Sum_probs=164.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEEEE----Eec-CCcEEEecCCCcEEEEEcCCCccceee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSYVK----FLN-KEDIVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~~~----~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      |++++|++|+.||.|++||+.....++..+..|.+    .+.+++    |+| +..+++++.|+.|++||+++++.... 
T Consensus       127 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-  205 (357)
T 3i2n_A          127 EGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-  205 (357)
T ss_dssp             -CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-
T ss_pred             CCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-
Confidence            57889999999999999999844447777776655    899999    455 45688999999999999999887544 


Q ss_pred             eccccceeEEEEeC---CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EEEE
Q psy10662         72 VGHINDKNFVGLAT---DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YVAC  147 (221)
Q Consensus        72 ~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~  147 (221)
                      ..|...|.+++|+|   ++.++++++.||.|++||+++++....+.        ...+.+|...|.+++|+|+++ ++++
T Consensus       206 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~l~~  277 (357)
T 3i2n_A          206 TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFA--------SVSEKAHKSTVWQVRHLPQNRELFLT  277 (357)
T ss_dssp             EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEE--------EEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred             cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccccee--------eeccCCCcCCEEEEEECCCCCcEEEE
Confidence            56888999999999   89999999999999999998766544331        123457899999999999998 8999


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeec----ccccccccccccccccceeEEEEcCCCcEEE-EecCCCeEEEEECCccc
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDT----VRSMLERDRNEDDTNEFVSAVCWRQLSRVLV-AANSQGIIKIYVIPIRV  220 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~  220 (221)
                      ++.||.|++||++............    .......+..+..|...|.+++|+|++++|+ +++.||.|++|++.+.+
T Consensus       278 ~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~  355 (357)
T 3i2n_A          278 AGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN  355 (357)
T ss_dssp             EETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred             EeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence            9999999999998765432211100    0001123334557889999999999999998 79999999999998754

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=5.4e-33  Score=203.55  Aligned_cols=212  Identities=13%  Similarity=0.117  Sum_probs=164.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEecC-C-cEEEecCCCcEEEEEc-CCCccceeeec--
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLNK-E-DIVSASTDSQLKLWNI-NKPNCLRSFVG--   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~~-~-~l~s~~~d~~v~~wd~-~~~~~~~~~~~--   73 (221)
                      |++++|++|+.||.|++|++....  .....+..|...|.+++|+|+ . .|++++.||.|++||+ .+++. ..+..  
T Consensus        21 ~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~   99 (342)
T 1yfq_A           21 PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNE   99 (342)
T ss_dssp             GGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCC
T ss_pred             CCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccC
Confidence            578999999999999999998433  234556689999999999974 5 5999999999999999 77655 56777  


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCC---------CeeeE---------EEE-----------------eecc
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGL---------SKHMH---------AYR-----------------FDTV  118 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~---------~~~~~---------~~~-----------------~~~~  118 (221)
                      |...|.+++|+| ++++++++.|+.|++||+++         ++++.         .+.                 |+..
T Consensus       100 ~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~  178 (342)
T 1yfq_A          100 ANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLP  178 (342)
T ss_dssp             CCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESS
T ss_pred             CCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECC
Confidence            999999999999 99999999999999999876         44221         111                 2333


Q ss_pred             c---ceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCC------Cceeeeeeeccccccccccccccccc
Q psy10662        119 R---SMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLS------KHMHAYRFDTVRSMLERDRNEDDTNE  188 (221)
Q Consensus       119 ~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (221)
                      .   .........+...+.+++|+| +++++++++.||.|++|+++..      +....+......      .....|..
T Consensus       179 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  252 (342)
T 1yfq_A          179 LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN------LKDTNLAY  252 (342)
T ss_dssp             CCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCC------TTCCSSCC
T ss_pred             ccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccc------ccccccce
Confidence            2   112223345677899999999 9999999999999999999876      444444311100      00113456


Q ss_pred             ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .|.+++|+|++++|++++.||.|++||+.+++
T Consensus       253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~  284 (342)
T 1yfq_A          253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK  284 (342)
T ss_dssp             CEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred             eEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence            89999999999999999999999999998765

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=7.6e-33  Score=207.01  Aligned_cols=204  Identities=15%  Similarity=0.192  Sum_probs=165.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEE-------------eccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFK-------------GHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPN   66 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-------------~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~   66 (221)
                      ++++|++|+.||.|++||+. .......+.             +|...|.+++|+| + ..|++++.|+.|++||+++++
T Consensus        55 ~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~  133 (408)
T 4a11_B           55 EGRYMLSGGSDGVIVLYDLE-NSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ  133 (408)
T ss_dssp             TCCEEEEEETTSCEEEEECC-CCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE
T ss_pred             CCCEEEEEcCCCeEEEEECC-CCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc
Confidence            88999999999999999998 443333332             4899999999997 4 469999999999999999998


Q ss_pred             cceeeeccccceeEEEEeCCC---CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662         67 CLRSFVGHINDKNFVGLATDG---DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD  143 (221)
Q Consensus        67 ~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  143 (221)
                      ....+. +...+.++.++|.+   .++++++.++.|++||+++++.+..             +..|...|.+++|+|+++
T Consensus       134 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~-------------~~~~~~~v~~~~~~~~~~  199 (408)
T 4a11_B          134 TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI-------------LQGHRQEILAVSWSPRYD  199 (408)
T ss_dssp             EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE-------------ECCCCSCEEEEEECSSCT
T ss_pred             cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee-------------ecCCCCcEEEEEECCCCC
Confidence            887775 77789999999854   4999999999999999998876654             367889999999999998


Q ss_pred             -EEEEecCCCeEEEEEcCCCC-ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        144 -YVACGSENNSLYIYYKGLSK-HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       144 -~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                       ++++++.||.|++||++... ....+.................|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus       200 ~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  278 (408)
T 4a11_B          200 YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE  278 (408)
T ss_dssp             TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred             cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence             58999999999999998775 333332111122222333345788999999999999999999999999999998754

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=5.7e-33  Score=205.51  Aligned_cols=201  Identities=10%  Similarity=0.034  Sum_probs=161.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEE--EEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCcc---cee-eec
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAV--FKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNC---LRS-FVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~--~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~---~~~-~~~   73 (221)
                      |++++|++++.||.|++||+. .++....  +..|...|.+++|+|+ ..|++++.|+.|++||++.++.   ... ...
T Consensus        62 ~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~  140 (372)
T 1k8k_C           62 PDSNRIVTCGTDRNAYVWTLK-GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKP  140 (372)
T ss_dssp             TTTTEEEEEETTSCEEEEEEE-TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTT
T ss_pred             CCCCEEEEEcCCCeEEEEECC-CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecc
Confidence            688999999999999999998 5543333  3568899999999974 5689999999999999988763   222 356


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEE-----EEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA-----YRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG  148 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  148 (221)
                      |...|.+++|+|+++++++++.|+.|++||++.......     +............+..|...+.+++|+|++++|+++
T Consensus       141 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  220 (372)
T 1k8k_C          141 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV  220 (372)
T ss_dssp             CCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE
T ss_pred             cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE
Confidence            788999999999999999999999999999652211000     000011223344556888999999999999999999


Q ss_pred             cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +.|+.|++||+++++.+..+.               .|...|.+++|+|++++|+++ .|+.|++|++.+
T Consensus       221 ~~d~~i~i~d~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~  274 (372)
T 1k8k_C          221 SHDSTVCLADADKKMAVATLA---------------SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS  274 (372)
T ss_dssp             ETTTEEEEEEGGGTTEEEEEE---------------CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred             eCCCEEEEEECCCCceeEEEc---------------cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence            999999999999887766554               567789999999999999888 899999999976

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-32  Score=196.98  Aligned_cols=198  Identities=13%  Similarity=0.152  Sum_probs=158.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC---ccceeeecccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP---NCLRSFVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~---~~~~~~~~~~~   76 (221)
                      |++++|++|+.||.|++||+. +.+....+..|...|.+++|+|+ ..+++++.|+.+++|++...   +.+..+..|..
T Consensus        27 ~~~~~l~s~~~dg~v~vw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~  105 (313)
T 3odt_A           27 VDDSKVASVSRDGTVRLWSKD-DQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQG  105 (313)
T ss_dssp             EETTEEEEEETTSEEEEEEES-SSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSS
T ss_pred             cCCCEEEEEEcCCcEEEEECC-CCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhccc
Confidence            478899999999999999997 77788888999999999999984 56899999999999998764   55667788999


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE----------eec-c-----------------cceeEeeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR----------FDT-V-----------------RSMLESSFVG  128 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------~~~-~-----------------~~~~~~~~~~  128 (221)
                      .|.++.|  +++++++++.|+.|++||  .++....+.          +.+ .                 .......+..
T Consensus       106 ~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  181 (313)
T 3odt_A          106 NVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSG  181 (313)
T ss_dssp             CEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECS
T ss_pred             CEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEec
Confidence            9999999  467899999999999999  444433332          111 0                 1112223333


Q ss_pred             -eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        129 -HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       129 -~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                       +...+.+++|+|++. +++++.||.|++||+++++.+..+.               .|...|.+++|+|++ .|++++.
T Consensus       182 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~---------------~~~~~i~~~~~~~~~-~l~~~~~  244 (313)
T 3odt_A          182 IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE---------------GHESFVYCIKLLPNG-DIVSCGE  244 (313)
T ss_dssp             SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE---------------CCSSCEEEEEECTTS-CEEEEET
T ss_pred             cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh---------------cCCceEEEEEEecCC-CEEEEec
Confidence             677888899998887 8888889999999988777665553               678899999999999 5889999


Q ss_pred             CCeEEEEECCccc
Q psy10662        208 QGIIKIYVIPIRV  220 (221)
Q Consensus       208 dg~i~iw~~~~~~  220 (221)
                      ||.|++||+.+++
T Consensus       245 dg~v~iwd~~~~~  257 (313)
T 3odt_A          245 DRTVRIWSKENGS  257 (313)
T ss_dssp             TSEEEEECTTTCC
T ss_pred             CCEEEEEECCCCc
Confidence            9999999998765

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-33  Score=224.92  Aligned_cols=197  Identities=15%  Similarity=0.205  Sum_probs=168.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecC-CceeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCc--cceeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN-TKEALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPN--CLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~   74 (221)
                      |++++|++|+.||.|++||+.. +.+....+.+|.++|++++|+|   +..|++++.||.|++||+.+++  .+..+..|
T Consensus        19 ~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h   98 (753)
T 3jro_A           19 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH   98 (753)
T ss_dssp             SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred             CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCC
Confidence            6899999999999999999973 3466778889999999999985   4669999999999999999886  66677889


Q ss_pred             ccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec------------
Q psy10662         75 INDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT------------  140 (221)
Q Consensus        75 ~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------  140 (221)
                      ...|.+++|+|+  ++++++++.||.|++||++.+.....           ..+.+|...|.+++|+|            
T Consensus        99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~-----------~~~~~~~~~v~~l~~~p~~~~~~~~~~~~  167 (753)
T 3jro_A           99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-----------IIIDAHAIGVNSASWAPATIEEDGEHNGT  167 (753)
T ss_dssp             SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC-----------EEEECCSSCEEEEEECCCC---------C
T ss_pred             CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce-----------eEeecCCCceEEEEecCcccccccccccC
Confidence            999999999999  99999999999999999987643222           23467889999999999            


Q ss_pred             -CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC---CcEEEEecCCCeEEEEEC
Q psy10662        141 -DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL---SRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       141 -~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iw~~  216 (221)
                       +++++++|+.||.|++||++++......           ...+.+|...|.+++|+|+   +++|++++.||.|++||+
T Consensus       168 ~d~~~l~sgs~dg~I~iwd~~~~~~~~~~-----------~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~  236 (753)
T 3jro_A          168 KESRKFVTGGADNLVKIWKYNSDAQTYVL-----------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ  236 (753)
T ss_dssp             GGGCCEEEEETTSCEEEEEEETTTTEEEE-----------EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred             CCCCEEEEEECCCeEEEEeccCCccccee-----------eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence             5899999999999999999876543222           1123478889999999999   999999999999999999


Q ss_pred             Ccc
Q psy10662        217 PIR  219 (221)
Q Consensus       217 ~~~  219 (221)
                      .++
T Consensus       237 ~~~  239 (753)
T 3jro_A          237 DNE  239 (753)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            875

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=6.5e-34  Score=212.49  Aligned_cols=199  Identities=13%  Similarity=0.097  Sum_probs=141.3

Q ss_pred             CCceEEEEeCCCeEEEEEecCCcee-----eEEEEeccCceEEEEEec---------CCcEEEecCCCcEEEEEcCCCcc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEA-----LAVFKGHRKAVSYVKFLN---------KEDIVSASTDSQLKLWNINKPNC   67 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~-----~~~~~~~~~~i~~~~~~~---------~~~l~s~~~d~~v~~wd~~~~~~   67 (221)
                      ++.+|++|+.|++|+|||.. .+..     +..+.+|.+.|.+++|+|         +..|++++.|++|++||++++.+
T Consensus       100 ~~~~las~~~d~~v~lw~~~-~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~  178 (393)
T 4gq1_A          100 YSLFLACVCQDNTVRLIITK-NETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP  178 (393)
T ss_dssp             EEEEEEEEETTSCEEEEEEE-TTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred             CCCEEEEEeCCCcEEEEECC-CCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence            45689999999999999998 4432     233568999999999986         34699999999999999998888


Q ss_pred             ceeeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEE--------------------------------
Q psy10662         68 LRSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYR--------------------------------  114 (221)
Q Consensus        68 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------  114 (221)
                      +..+..|..++.+++|+|++. +|++++.|+.|++||+++++......                                
T Consensus       179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~  258 (393)
T 4gq1_A          179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA  258 (393)
T ss_dssp             EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred             eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence            888888999999999999875 79999999999999998775543221                                


Q ss_pred             ---e--------------------ecccceeEeeEEEeeCceEEE------------------EEec--CCCEEEEecCC
Q psy10662        115 ---F--------------------DTVRSMLESSFVGHINDKNFV------------------GLAT--DGDYVACGSEN  151 (221)
Q Consensus       115 ---~--------------------~~~~~~~~~~~~~~~~~v~~~------------------~~~~--~~~~l~~~~~d  151 (221)
                         |                    +.........+..+...+..+                  .++|  ++.++++|+.|
T Consensus       259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~D  338 (393)
T 4gq1_A          259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQH  338 (393)
T ss_dssp             EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTT
T ss_pred             eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCC
Confidence               1                    111111111112222222222                  2222  34467788899


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      |.|++||+.+++......               .|..+|.+++|+|||++||+++.+| +.+|.+.
T Consensus       339 g~V~lwd~~~~~~~~~~~---------------~~~~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          339 GLIQLINTYEKDSNSIPI---------------QLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             TEEEEEETTCTTCCEEEE---------------ECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             CEEEEEECCCCcEEEEec---------------CCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence            999999998877654432               5677899999999999999998776 5666553

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-32  Score=197.45  Aligned_cols=183  Identities=16%  Similarity=0.250  Sum_probs=159.0

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeec-cccce
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVG-HINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~-~~~~v   78 (221)
                      ++++|++++.||.|++||   ..+....+..|...+.+++|.|  ++.+++++.|+.|++||  ..+....+.. |...+
T Consensus       113 ~~~~l~~~~~d~~i~~~d---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i  187 (313)
T 3odt_A          113 QDGVVISGSWDKTAKVWK---EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVV  187 (313)
T ss_dssp             ETTEEEEEETTSEEEEEE---TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCE
T ss_pred             cCCEEEEEeCCCCEEEEc---CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccE
Confidence            467899999999999999   4667788889999999999986  56799999999999999  4455555655 88899


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      .+++|+|++. +++++.|+.|++||+++++.+..+             ..|...+.+++|+|++ .+++++.||.|++||
T Consensus       188 ~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~-------------~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd  252 (313)
T 3odt_A          188 RHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTY-------------EGHESFVYCIKLLPNG-DIVSCGEDRTVRIWS  252 (313)
T ss_dssp             EEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEE-------------ECCSSCEEEEEECTTS-CEEEEETTSEEEEEC
T ss_pred             EEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhh-------------hcCCceEEEEEEecCC-CEEEEecCCEEEEEE
Confidence            9999999988 999999999999999988776654             6788999999999999 588999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +++++....+.               .|...|.+++|+|+++ +++++.||.|++|++++++
T Consensus       253 ~~~~~~~~~~~---------------~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~  298 (313)
T 3odt_A          253 KENGSLKQVIT---------------LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSR  298 (313)
T ss_dssp             TTTCCEEEEEE---------------CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGG
T ss_pred             CCCCceeEEEe---------------ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCc
Confidence            99887766654               5677899999999998 5668899999999999875

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1.3e-32  Score=205.78  Aligned_cols=217  Identities=12%  Similarity=0.107  Sum_probs=170.2

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC----CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK----EDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      ++++|++++.||.|++||+. .++....+. +...+.++.|++.    ..+++++.|+.|++||+++++.+..+..|...
T Consensus       111 ~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~  188 (408)
T 4a11_B          111 DTGMFTSSSFDKTLKVWDTN-TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQE  188 (408)
T ss_dssp             CTTCEEEEETTSEEEEEETT-TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSC
T ss_pred             CCcEEEEEeCCCeEEEeeCC-CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCc
Confidence            66799999999999999998 677777776 7889999999862    26899999999999999999999999999999


Q ss_pred             eeEEEEeCCCC-EEEEecCCCeEEEEECCCCe-eeEEEEeec--ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         78 KNFVGLATDGD-YVACGSENNSLYIYYKGLSK-HMHAYRFDT--VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        78 v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      |.+++|+|+++ ++++++.||.|++||+++++ .+..+....  ...........|...|.+++|+|++++|++++.||.
T Consensus       189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  268 (408)
T 4a11_B          189 ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR  268 (408)
T ss_dssp             EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence            99999999998 58999999999999998765 332221000  011111223578889999999999999999999999


Q ss_pred             EEEEEcCCCCceeeeeeecc--------------------------------cccccccccccccccceeEEEEcCCCcE
Q psy10662        154 LYIYYKGLSKHMHAYRFDTV--------------------------------RSMLERDRNEDDTNEFVSAVCWRQLSRV  201 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~  201 (221)
                      |++||+.+++....+.....                                -........+.+|...|.+++|+|++++
T Consensus       269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~  348 (408)
T 4a11_B          269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE  348 (408)
T ss_dssp             EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTE
T ss_pred             EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCE
Confidence            99999988765432210000                                0011223345678899999999999999


Q ss_pred             EEEecCCCeEEEEECCccc
Q psy10662        202 LVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       202 l~~~~~dg~i~iw~~~~~~  220 (221)
                      |++++.||.|++|++.+++
T Consensus       349 l~s~~~dg~i~iw~~~~~~  367 (408)
T 4a11_B          349 LYSGSRDCNILAWVPSLYE  367 (408)
T ss_dssp             EEEEETTSCEEEEEECC--
T ss_pred             EEEECCCCeEEEEeCCCCC
Confidence            9999999999999998764

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=6.3e-33  Score=204.15  Aligned_cols=194  Identities=14%  Similarity=0.170  Sum_probs=161.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEE------ec-CCcEEEecCCCcEEEEEcCCCc-cceeeec
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKF------LN-KEDIVSASTDSQLKLWNINKPN-CLRSFVG   73 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~------~~-~~~l~s~~~d~~v~~wd~~~~~-~~~~~~~   73 (221)
                      ++++|++|+.||.|++||+......+..+.+|...|.+++|      +| +..|++++.|+.|++||+++++ .+..+..
T Consensus        79 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~  158 (357)
T 3i2n_A           79 QQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP  158 (357)
T ss_dssp             TTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred             CCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc
Confidence            47999999999999999998433378889999999999976      44 4569999999999999999887 6667765


Q ss_pred             ccc----ceeEEE----EeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec---CC
Q psy10662         74 HIN----DKNFVG----LATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT---DG  142 (221)
Q Consensus        74 ~~~----~v~~~~----~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~  142 (221)
                      |..    .+.+++    |+|++.++++++.|+.|++||+++++....              ..|...+.+++|+|   ++
T Consensus       159 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~  224 (357)
T 3i2n_A          159 VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE--------------TNIKNGVCSLEFDRKDISM  224 (357)
T ss_dssp             CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE--------------EECSSCEEEEEESCSSSSC
T ss_pred             cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee--------------cCCCCceEEEEcCCCCCCC
Confidence            544    788888    788999999999999999999998876432              56788999999999   99


Q ss_pred             CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECCcc
Q psy10662        143 DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~  219 (221)
                      +++++++.||.|++||+++.+....+...          ...+|...|.+++|+|+++ +|++++.||.|++|++.++
T Consensus       225 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  292 (357)
T 3i2n_A          225 NKLVATSLEGKFHVFDMRTQHPTKGFASV----------SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP  292 (357)
T ss_dssp             CEEEEEESTTEEEEEEEEEEETTTEEEEE----------EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred             CEEEEECCCCeEEEEeCcCCCcccceeee----------ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence            99999999999999999876554443211          1236888999999999998 8999999999999998753

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-33  Score=213.31  Aligned_cols=213  Identities=17%  Similarity=0.216  Sum_probs=165.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEe--ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeee-cccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG--HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFV-GHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~-~~~~   76 (221)
                      |++.+|++|+.||.|++||+. +++++..+..  |.+.|++++|+|+ ..|++++.||.|++||+++++++..+. .|..
T Consensus       180 ~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  258 (437)
T 3gre_A          180 EEKSLLVALTNLSRVIIFDIR-TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA  258 (437)
T ss_dssp             SSCEEEEEEETTSEEEEEETT-TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred             CCCCEEEEEeCCCeEEEEeCC-CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence            468899999999999999998 7888888888  8999999999985 568999999999999999999888775 6788


Q ss_pred             ceeEEEEe----CCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccce-----e------EeeEEE--eeCceEEEEEe
Q psy10662         77 DKNFVGLA----TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM-----L------ESSFVG--HINDKNFVGLA  139 (221)
Q Consensus        77 ~v~~~~~~----~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-----~------~~~~~~--~~~~v~~~~~~  139 (221)
                      +|.+++|+    |++.++++++.|+.|++||+++++.+..+........     .      ...+.+  |...|.+++|+
T Consensus       259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~  338 (437)
T 3gre_A          259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS  338 (437)
T ss_dssp             EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred             ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence            99999665    4677999999999999999999998887742211000     0      001233  77889999999


Q ss_pred             cCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc----------------------cccccccccccccccceeEEEEcC
Q psy10662        140 TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV----------------------RSMLERDRNEDDTNEFVSAVCWRQ  197 (221)
Q Consensus       140 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~v~~~~~~~  197 (221)
                       ++++|++|+.|+.|++||+.+++....+.-...                      ............|...|++++|++
T Consensus       339 -~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~  417 (437)
T 3gre_A          339 -NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCE  417 (437)
T ss_dssp             -TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEE
T ss_pred             -CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeec
Confidence             779999999999999999999887766542100                      000011122334889999999999


Q ss_pred             C--CcEEEEecCCCeEEEEE
Q psy10662        198 L--SRVLVAANSQGIIKIYV  215 (221)
Q Consensus       198 ~--~~~l~~~~~dg~i~iw~  215 (221)
                      +  +.+|++|+.||.|++|+
T Consensus       418 ~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          418 VDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             SSSSEEEEEEETTSCEEEEC
T ss_pred             cCCceEEEEEcCCceEEEeC
Confidence            8  88999999999999995

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=9.3e-33  Score=208.53  Aligned_cols=205  Identities=17%  Similarity=0.249  Sum_probs=162.3

Q ss_pred             CCCc-eEEEEeCCCeEEEEEecCCc------eeeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCC---ccc
Q psy10662          1 MNSC-HLAFGSADHCVHYYDLRNTK------EALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKP---NCL   68 (221)
Q Consensus         1 ~~~~-~l~~~~~dg~i~i~~~~~~~------~~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~---~~~   68 (221)
                      |++. +|++|+.||.|++|++....      .....+..|...|.+++|+| + ..|++++.|+.|++||++++   +.+
T Consensus       191 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~  270 (430)
T 2xyi_A          191 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS  270 (430)
T ss_dssp             TTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred             CCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence            4556 99999999999999998421      12456778999999999998 3 45789999999999999987   566


Q ss_pred             eeeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EE
Q psy10662         69 RSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YV  145 (221)
Q Consensus        69 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l  145 (221)
                      ..+..|...|++++|+|++. ++++++.||.|++||++.. +++.             .+..|...|.+++|+|+++ +|
T Consensus       271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~-------------~~~~h~~~v~~i~~sp~~~~~l  337 (430)
T 2xyi_A          271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH-------------SFESHKDEIFQVQWSPHNETIL  337 (430)
T ss_dssp             EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE-------------EEECCSSCEEEEEECSSCTTEE
T ss_pred             eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeE-------------EeecCCCCEEEEEECCCCCCEE
Confidence            77778999999999999987 6889999999999999873 3333             3467889999999999985 69


Q ss_pred             EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECCcc
Q psy10662        146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++++.|+.|++||+.......... ............+.+|...|++++|+|+++ +|++++.||.|++|++...
T Consensus       338 ~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          338 ASSGTDRRLHVWDLSKIGEEQSTE-DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             EEEETTSCCEEEEGGGTTCCCCHH-HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             EEEeCCCcEEEEeCCCCccccCcc-ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence            999999999999997643211100 000011122334457888999999999999 8999999999999998753

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=2.6e-32  Score=205.52  Aligned_cols=200  Identities=13%  Similarity=0.167  Sum_probs=165.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCC-ccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP-NCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~~~~v~   79 (221)
                      |||++||+|+.||.|+|||+. +++.+..+.+|...+.++.++ +..+++++.|+.+++||.... ..+..+.+|...+.
T Consensus       157 pdg~~lasgs~Dg~v~iWd~~-~~~~~~~~~~h~~~v~~~s~~-~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~  234 (420)
T 4gga_A          157 KEGNYLAVGTSSAEVQLWDVQ-QQKRLRNMTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVC  234 (420)
T ss_dssp             TTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred             CCCCEEEEEECCCeEEEEEcC-CCcEEEEEeCCCCceEEEeeC-CCEEEEEeCCCceeEeeecccceeeEEeccccccee
Confidence            689999999999999999998 788899999999999999886 467999999999999999764 44566788999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCee--------------eEEEE----------------------eecccceeE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKH--------------MHAYR----------------------FDTVRSMLE  123 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--------------~~~~~----------------------~~~~~~~~~  123 (221)
                      .+.++|++.++++++.|+.+++||..+++.              +..+.                      |+.......
T Consensus       235 ~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~  314 (420)
T 4gga_A          235 GLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL  314 (420)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred             eeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence            999999999999999999999999876532              11111                      233333333


Q ss_pred             eeEEEeeCceEEEEEecCCCEEEEec--CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE
Q psy10662        124 SSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV  201 (221)
Q Consensus       124 ~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  201 (221)
                      ..+. +...+.++.|+|+++.+++++  .|+.|++||+.+++.+..+.               +|...|++++|+|+|++
T Consensus       315 ~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~---------------gH~~~V~~l~~spdg~~  378 (420)
T 4gga_A          315 SAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---------------GHTSRVLSLTMSPDGAT  378 (420)
T ss_dssp             EEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---------------CCSSCEEEEEECTTSSC
T ss_pred             eeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc---------------CCCCCEEEEEEcCCCCE
Confidence            3333 345688899999999887654  79999999999888766553               79999999999999999


Q ss_pred             EEEecCCCeEEEEECCc
Q psy10662        202 LVAANSQGIIKIYVIPI  218 (221)
Q Consensus       202 l~~~~~dg~i~iw~~~~  218 (221)
                      |++|+.|++|++|++..
T Consensus       379 l~S~s~D~tvriWdv~~  395 (420)
T 4gga_A          379 VASAAADETLRLWRCFE  395 (420)
T ss_dssp             EEEEETTTEEEEECCSC
T ss_pred             EEEEecCCeEEEEECCC
Confidence            99999999999999864

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=9.5e-33  Score=208.48  Aligned_cols=191  Identities=16%  Similarity=0.269  Sum_probs=158.5

Q ss_pred             CceEEEEeCCCeEEEEEecCC---------ceeeEEEEeccCceEEEEEecC-C-cEEEecCCCcEEEEEcCCCcc----
Q psy10662          3 SCHLAFGSADHCVHYYDLRNT---------KEALAVFKGHRKAVSYVKFLNK-E-DIVSASTDSQLKLWNINKPNC----   67 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~---------~~~~~~~~~~~~~i~~~~~~~~-~-~l~s~~~d~~v~~wd~~~~~~----   67 (221)
                      +.+|++++.||.|++|++...         ..++..+.+|...|.+++|+|. . .|++++.||.|++||+..+..    
T Consensus       141 ~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~  220 (430)
T 2xyi_A          141 ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV  220 (430)
T ss_dssp             EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred             CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence            679999999999999999831         5677888999999999999974 3 699999999999999987422    


Q ss_pred             ---ceeeeccccceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662         68 ---LRSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD  143 (221)
Q Consensus        68 ---~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  143 (221)
                         ...+..|...|.+++|+| ++.+|++++.|+.|++||+++++..          .....+..|...|++++|+|++.
T Consensus       221 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~----------~~~~~~~~~~~~v~~i~~~p~~~  290 (430)
T 2xyi_A          221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS----------KPSHTVDAHTAEVNCLSFNPYSE  290 (430)
T ss_dssp             EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS----------SCSEEEECCSSCEEEEEECSSCT
T ss_pred             eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC----------cceeEeecCCCCeEEEEeCCCCC
Confidence               345668999999999999 6778999999999999999876310          11223467889999999999887


Q ss_pred             -EEEEecCCCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECCc
Q psy10662        144 -YVACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       144 -~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~  218 (221)
                       ++++|+.||.|++||++.. ..+..+               ..|...|.+++|+|+++ +|++++.||.|++||+..
T Consensus       291 ~~l~tg~~dg~v~vwd~~~~~~~~~~~---------------~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~  353 (430)
T 2xyi_A          291 FILATGSADKTVALWDLRNLKLKLHSF---------------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK  353 (430)
T ss_dssp             TEEEEEETTSEEEEEETTCTTSCSEEE---------------ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred             CEEEEEeCCCeEEEEeCCCCCCCeEEe---------------ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence             6889999999999999874 333333               36788999999999985 689999999999999976

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.5e-32  Score=207.71  Aligned_cols=196  Identities=16%  Similarity=0.339  Sum_probs=155.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      +++++|++|+.||.|++||+. +++....+.+|.+.|.+++| .++.+++|+.||.|++||+++++.+..+..|...|.+
T Consensus       141 ~d~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~  218 (435)
T 1p22_A          141 YDDQKIVSGLRDNTIKIWDKN-TLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH  218 (435)
T ss_dssp             CCSSEEEEEESSSCEEEEESS-SCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEE
T ss_pred             ECCCEEEEEeCCCeEEEEeCC-CCeEEEEEcCCCCcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEE
Confidence            368899999999999999998 78888899999999999999 5678999999999999999999999999999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE------------------------------eecccceeEeeEEEee
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR------------------------------FDTVRSMLESSFVGHI  130 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~  130 (221)
                      ++|++  .++++++.||.|++||+++++......                              |+......+..+.+|.
T Consensus       219 l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~  296 (435)
T 1p22_A          219 LRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK  296 (435)
T ss_dssp             EECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred             EEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC
Confidence            99974  599999999999999998776542110                              3444444455555666


Q ss_pred             CceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCe
Q psy10662        131 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGI  210 (221)
Q Consensus       131 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  210 (221)
                      ..+.+++++  ++++++|+.||.|++||+++++.+..+               .+|...|.+++|  ++++|++|+.||.
T Consensus       297 ~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~---------------~~h~~~v~~~~~--~~~~l~sg~~dg~  357 (435)
T 1p22_A          297 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL---------------EGHEELVRCIRF--DNKRIVSGAYDGK  357 (435)
T ss_dssp             SCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEE---------------CCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred             CcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEE---------------eCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence            666666653  456666666666666666665544433               367888999988  7889999999999


Q ss_pred             EEEEECCcc
Q psy10662        211 IKIYVIPIR  219 (221)
Q Consensus       211 i~iw~~~~~  219 (221)
                      |++||+.++
T Consensus       358 i~vwd~~~~  366 (435)
T 1p22_A          358 IKVWDLVAA  366 (435)
T ss_dssp             EEEEEHHHH
T ss_pred             EEEEECCCC
Confidence            999998654

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=4.2e-33  Score=211.00  Aligned_cols=214  Identities=10%  Similarity=0.196  Sum_probs=151.5

Q ss_pred             CCC--ceEEEEeCCCeEEEEEecCCcee---------------------------------------eEE-EEeccCceE
Q psy10662          1 MNS--CHLAFGSADHCVHYYDLRNTKEA---------------------------------------LAV-FKGHRKAVS   38 (221)
Q Consensus         1 ~~~--~~l~~~~~dg~i~i~~~~~~~~~---------------------------------------~~~-~~~~~~~i~   38 (221)
                      |++  .+|++++.||.|++||+. .+..                                       ... ..+|...|.
T Consensus       103 ~~~~~~~l~s~s~d~~i~iw~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~  181 (447)
T 3dw8_B          103 PQKNAAQFLLSTNDKTIKLWKIS-ERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN  181 (447)
T ss_dssp             CCCSSSEEEEEECSSCEEEEEEE-EEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred             CCCCcceEEEeCCCCeEEEEecc-cccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence            455  789999999999999997 3222                                       112 257999999


Q ss_pred             EEEEecCCc-EEEecCCCcEEEEEcCC-Cccce-------eeeccccceeEEEEeCCC-CEEEEecCCCeEEEEECCCCe
Q psy10662         39 YVKFLNKED-IVSASTDSQLKLWNINK-PNCLR-------SFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSK  108 (221)
Q Consensus        39 ~~~~~~~~~-l~s~~~d~~v~~wd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~  108 (221)
                      +++|+|++. |+++ .|+.|++||+++ .+.+.       .+..|...|.+++|+|++ .++++++.||.|++||+++++
T Consensus       182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  260 (447)
T 3dw8_B          182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA  260 (447)
T ss_dssp             EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred             EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence            999998654 6676 899999999984 33333       255788999999999998 899999999999999999877


Q ss_pred             e----eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC-CCceeeeeeeccccccccccc-
Q psy10662        109 H----MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL-SKHMHAYRFDTVRSMLERDRN-  182 (221)
Q Consensus       109 ~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~-  182 (221)
                      .    +..+..... ......+.+|...|.+++|+|++++|++++. +.|++||+++ ++.+..+.....  ....+.. 
T Consensus       261 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~--~~~~l~~~  336 (447)
T 3dw8_B          261 LCDRHSKLFEEPED-PSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEY--LRSKLCSL  336 (447)
T ss_dssp             SSCTTCEEECCC------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGG--GTTTHHHH
T ss_pred             cccceeeEeccCCC-ccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccc--cccccccc
Confidence            5    333310000 0000011122248999999999999999999 9999999987 665555532110  0000000 


Q ss_pred             -ccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        183 -EDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       183 -~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                       ....-..+..++|+|++++|++++.||.|++||+.+++
T Consensus       337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~  375 (447)
T 3dw8_B          337 YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR  375 (447)
T ss_dssp             HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred             ccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence             00000113459999999999999999999999998764

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-32  Score=202.41  Aligned_cols=188  Identities=11%  Similarity=0.041  Sum_probs=147.9

Q ss_pred             EEEEeCCCeEEEEEecC--------CceeeEEEE-eccCceEEEEEec--CC-cEEEecCCCcEEEEEcCCCccceeee-
Q psy10662          6 LAFGSADHCVHYYDLRN--------TKEALAVFK-GHRKAVSYVKFLN--KE-DIVSASTDSQLKLWNINKPNCLRSFV-   72 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~--------~~~~~~~~~-~~~~~i~~~~~~~--~~-~l~s~~~d~~v~~wd~~~~~~~~~~~-   72 (221)
                      +++|+.|+.|++|+...        ..+.+..+. .|.++|.+++|+|  ++ .+++++.||.|++||+++++.+.... 
T Consensus        88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~  167 (343)
T 3lrv_A           88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA  167 (343)
T ss_dssp             EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred             eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence            89999999999997652        223233333 5668899999998  54 58889999999999999998866553 


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeee-EEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEecC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHM-HAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      .+...+.+++|+|++.++++|+.||.|++||+++++.+ ..             +.. |...|++++|+|++.+|++++.
T Consensus       168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~-------------~~~~h~~~v~~l~fs~~g~~l~s~~~  234 (343)
T 3lrv_A          168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSR-------------FPVDEEAKIKEVKFADNGYWMVVECD  234 (343)
T ss_dssp             CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEE-------------CCCCTTSCEEEEEECTTSSEEEEEES
T ss_pred             CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccE-------------EeccCCCCEEEEEEeCCCCEEEEEeC
Confidence            34558999999999999999999999999999988765 33             345 8899999999999999999995


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccce--eEEEEcCCCcEEEEecC-CCeEEEEECCcc
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV--SAVCWRQLSRVLVAANS-QGIIKIYVIPIR  219 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~  219 (221)
                       +.|++||+++.+....+.            .+..|...+  .+++|+|+|++|++++. |+.|++|++..+
T Consensus       235 -~~v~iwd~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~  293 (343)
T 3lrv_A          235 -QTVVCFDLRKDVGTLAYP------------TYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK  293 (343)
T ss_dssp             -SBEEEEETTSSTTCBSSC------------CCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             -CeEEEEEcCCCCcceeec------------ccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence             499999998876544332            111222333  46999999999999988 999999998643

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.8e-32  Score=204.23  Aligned_cols=188  Identities=14%  Similarity=0.214  Sum_probs=159.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ++..+++++.||.|++||+. +++....+.. |...|.+++|+|+ ..|++++.||.|++||+.+++.+..+..|...|.
T Consensus       102 s~~~l~~~~~d~~v~lw~~~-~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~  180 (401)
T 4aez_A          102 SNLNVVAVALERNVYVWNAD-SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVG  180 (401)
T ss_dssp             CTTSEEEEEETTEEEEEETT-TCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred             cCCCEEEEECCCeEEEeeCC-CCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceE
Confidence            35678889999999999998 6666666665 7899999999975 5688999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      +++|+  ++++++++.||.|++||++.. +.+.             .+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus       181 ~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd  245 (401)
T 4aez_A          181 CLSWN--RHVLSSGSRSGAIHHHDVRIANHQIG-------------TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWD  245 (401)
T ss_dssp             EEEEE--TTEEEEEETTSEEEEEETTSSSCEEE-------------EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEC--CCEEEEEcCCCCEEEEecccCcceee-------------EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEcc
Confidence            99995  569999999999999999843 3332             3578899999999999999999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCC-cEEEEec--CCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVAAN--SQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~dg~i~iw~~~~~~  220 (221)
                      +++.+....+.               .|...|.+++|+|++ .++++++  .|+.|++||+.+++
T Consensus       246 ~~~~~~~~~~~---------------~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~  295 (401)
T 4aez_A          246 ARSSIPKFTKT---------------NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA  295 (401)
T ss_dssp             TTCSSEEEEEC---------------CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred             CCCCCccEEec---------------CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence            98876655442               578889999999976 4556654  79999999998764

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.3e-32  Score=208.08  Aligned_cols=204  Identities=19%  Similarity=0.268  Sum_probs=167.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccc---eeeeccccce
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL---RSFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~---~~~~~~~~~v   78 (221)
                      ++++|++|+.||.|++||+. +++.+..+..|...|.+++|++ +.+++++.||.|++||+++++..   ..+.+|...|
T Consensus       182 ~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v  259 (435)
T 1p22_A          182 DERVIITGSSDSTVRVWDVN-TGEMLNTLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV  259 (435)
T ss_dssp             CSSEEEEEETTSCEEEEESS-SCCEEEEECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCE
T ss_pred             CCCEEEEEcCCCeEEEEECC-CCcEEEEEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcE
Confidence            67899999999999999998 7788899999999999999974 58999999999999999988766   5667899999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------------------------eecccceeEeeEEEeeC
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------------------------FDTVRSMLESSFVGHIN  131 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~  131 (221)
                      .+++|  +++++++++.||.|++||+++++.+..+.                           |+......+..+.+|..
T Consensus       260 ~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~  337 (435)
T 1p22_A          260 NVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE  337 (435)
T ss_dssp             EEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred             EEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcC
Confidence            99999  67899999999999999999988877665                           55566667778888999


Q ss_pred             ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662        132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  211 (221)
                      .|.+++|  ++++|++|+.||.|++||+.++.....      .........+.+|...|.+++|  ++++|++++.||.|
T Consensus       338 ~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~------~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i  407 (435)
T 1p22_A          338 LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRA------PAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTI  407 (435)
T ss_dssp             CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTS------CTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEE
T ss_pred             cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccc------cccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEE
Confidence            9999998  788999999999999999875541100      0000012233578889999999  78899999999999


Q ss_pred             EEEECCcc
Q psy10662        212 KIYVIPIR  219 (221)
Q Consensus       212 ~iw~~~~~  219 (221)
                      ++||+.++
T Consensus       408 ~iwd~~~~  415 (435)
T 1p22_A          408 LIWDFLND  415 (435)
T ss_dssp             EEEC----
T ss_pred             EEEECCCC
Confidence            99999764

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=1.7e-32  Score=230.18  Aligned_cols=206  Identities=17%  Similarity=0.237  Sum_probs=175.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ||+++|++|+.||.|++||+. +++.+..+.+|.+.|.+++|+|+ ..+++++.|+.|++||+.+++.+..+.+|...|.
T Consensus       625 ~~~~~l~s~~~d~~i~vw~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~  703 (1249)
T 3sfz_A          625 QDGQRIASCGADKTLQVFKAE-TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVN  703 (1249)
T ss_dssp             TTSSEEEEEETTSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             CCCCEEEEEeCCCeEEEEECC-CCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEE
Confidence            689999999999999999998 77888899999999999999985 5689999999999999999999999999999999


Q ss_pred             EEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         80 FVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        80 ~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      +++|+|+  +.++++++.|+.|++||+++++.+..             +.+|...|.+++|+|+++++++++.||.|++|
T Consensus       704 ~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~-------------~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw  770 (1249)
T 3sfz_A          704 CCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNT-------------MFGHTNSVNHCRFSPDDELLASCSADGTLRLW  770 (1249)
T ss_dssp             EEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEE-------------ECCCSSCEEEEEECSSTTEEEEEESSSEEEEE
T ss_pred             EEEEecCCCceEEEEEeCCCeEEEEECCCcchhhe-------------ecCCCCCEEEEEEecCCCEEEEEECCCeEEEE
Confidence            9999994  55899999999999999998887655             36899999999999999999999999999999


Q ss_pred             EcCCCCceeeeeeec-----------------------ccccc-----------------cccccccccccceeEEEEcC
Q psy10662        158 YKGLSKHMHAYRFDT-----------------------VRSML-----------------ERDRNEDDTNEFVSAVCWRQ  197 (221)
Q Consensus       158 d~~~~~~~~~~~~~~-----------------------~~~~~-----------------~~~~~~~~~~~~v~~~~~~~  197 (221)
                      |+.++.....+....                       .+..+                 .......+|...|.+++|+|
T Consensus       771 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp  850 (1249)
T 3sfz_A          771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP  850 (1249)
T ss_dssp             EGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred             eCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence            998876655443211                       00000                 00001126788899999999


Q ss_pred             CCcEEEEecCCCeEEEEECCccc
Q psy10662        198 LSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       198 ~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +++++++++.||.|++|++.+++
T Consensus       851 ~~~~l~~~~~dg~v~vwd~~~~~  873 (1249)
T 3sfz_A          851 YDHLAVIALSQYCVELWNIDSRL  873 (1249)
T ss_dssp             STTEEEEECSSSCEEEEETTTTE
T ss_pred             CCCEEEEEeCCCeEEEEEcCCCc
Confidence            99999999999999999998754

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.7e-32  Score=199.61  Aligned_cols=181  Identities=13%  Similarity=0.191  Sum_probs=146.1

Q ss_pred             ceeeEEEEeccCceEEEEE-----ec--CCcEEEecCCCcEEEEEcCCC-------ccceeeeccccceeEEEEeCCCCE
Q psy10662         24 KEALAVFKGHRKAVSYVKF-----LN--KEDIVSASTDSQLKLWNINKP-------NCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        24 ~~~~~~~~~~~~~i~~~~~-----~~--~~~l~s~~~d~~v~~wd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      ......+.+|.+.|++++|     ++  +..|++|+.|++|++||+.+.       .+...+.+|...|.+++|+|++.+
T Consensus        11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~   90 (343)
T 2xzm_R           11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF   90 (343)
T ss_dssp             EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred             eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence            3456788999999999999     54  456999999999999999753       345567889999999999999999


Q ss_pred             EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC------
Q psy10662         90 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK------  163 (221)
Q Consensus        90 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~------  163 (221)
                      +++++.|+.|++||+++++.+..             +.+|...|.+++|+|++++|++++.|+.|++||+....      
T Consensus        91 l~s~s~D~~v~lwd~~~~~~~~~-------------~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~  157 (343)
T 2xzm_R           91 AISSSWDKTLRLWDLRTGTTYKR-------------FVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAE  157 (343)
T ss_dssp             EEEEETTSEEEEEETTSSCEEEE-------------EECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCT
T ss_pred             EEEEcCCCcEEEEECCCCcEEEE-------------EcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeec
Confidence            99999999999999998877655             47899999999999999999999999999999986321      


Q ss_pred             ------ceeeeeeecccc--------------------------cccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662        164 ------HMHAYRFDTVRS--------------------------MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       164 ------~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  211 (221)
                            .+..+.+.+...                          .......+.+|...|.+++|+|+|++|++++.||.|
T Consensus       158 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v  237 (343)
T 2xzm_R          158 KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL  237 (343)
T ss_dssp             TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred             ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence                  112222222110                          001122345788899999999999999999999999


Q ss_pred             EEEECC
Q psy10662        212 KIYVIP  217 (221)
Q Consensus       212 ~iw~~~  217 (221)
                      ++||+.
T Consensus       238 ~iwd~~  243 (343)
T 2xzm_R          238 LIWDIL  243 (343)
T ss_dssp             EEEESS
T ss_pred             EEEECC
Confidence            999994

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=2e-33  Score=212.51  Aligned_cols=205  Identities=14%  Similarity=0.104  Sum_probs=154.0

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEe---ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKG---HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      ++++|++|+.||+|++||++ .+. ...+..   +...+.+++|+|+ ..|++|+.||.|++||++ ++.+..+.+|...
T Consensus       176 ~~~~l~s~s~D~~v~iwd~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~  252 (435)
T 4e54_B          176 NTNQFYASSMEGTTRLQDFK-GNI-LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKK  252 (435)
T ss_dssp             CTTEEEEECSSSCEEEEETT-SCE-EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSC
T ss_pred             CCCEEEEEeCCCEEEEeecc-CCc-eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccce
Confidence            67899999999999999997 443 333332   2345789999975 568899999999999986 4566778899999


Q ss_pred             eeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         78 KNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        78 v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      |.+++|+|++. ++++++.|+.|++||+++.+....+          ....+|...|++++|+|++++|++++.||.|++
T Consensus       253 v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~----------~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~i  322 (435)
T 4e54_B          253 VTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF----------LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRV  322 (435)
T ss_dssp             EEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC----------SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEE
T ss_pred             EEeeeecCCCceEEEEecCcceeeEEecccccccceE----------EEeeeccccccceeECCCCCeeEEEcCCCEEEE
Confidence            99999999986 6889999999999999876543322          123578899999999999999999999999999


Q ss_pred             EEcCCCCceeeeee----------------eccc---------------------cccc--------ccc-cccccccce
Q psy10662        157 YYKGLSKHMHAYRF----------------DTVR---------------------SMLE--------RDR-NEDDTNEFV  190 (221)
Q Consensus       157 ~d~~~~~~~~~~~~----------------~~~~---------------------~~~~--------~~~-~~~~~~~~v  190 (221)
                      ||+.++.....+..                .+..                     ....        ... ...+|...|
T Consensus       323 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v  402 (435)
T 4e54_B          323 YSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGI  402 (435)
T ss_dssp             EESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCC
T ss_pred             EECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcE
Confidence            99987664433211                0000                     0000        000 123566778


Q ss_pred             eEE-EEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        191 SAV-CWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       191 ~~~-~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .++ +|+|+|++|++|+ |+.|++|++++++
T Consensus       403 ~s~~~fspdg~~lasg~-d~~i~iW~~~~gk  432 (435)
T 4e54_B          403 SSLNEFNPMGDTLASAM-GYHILIWSQQEAR  432 (435)
T ss_dssp             CCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred             EEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence            877 6999999999986 8899999999875

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.8e-32  Score=199.28  Aligned_cols=190  Identities=10%  Similarity=0.136  Sum_probs=165.6

Q ss_pred             CCCceEEEEeCC-----CeEEEEEecCCc----------eeeEEEEeccC--ceEEEEEec-CCcEEEecCCCcEEEEEc
Q psy10662          1 MNSCHLAFGSAD-----HCVHYYDLRNTK----------EALAVFKGHRK--AVSYVKFLN-KEDIVSASTDSQLKLWNI   62 (221)
Q Consensus         1 ~~~~~l~~~~~d-----g~i~i~~~~~~~----------~~~~~~~~~~~--~i~~~~~~~-~~~l~s~~~d~~v~~wd~   62 (221)
                      |++++|++++.+     |.|++||+....          .....+..|..  .+.+++|+| +..+++++.||.|++||+
T Consensus       125 ~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~  204 (369)
T 3zwl_B          125 PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDV  204 (369)
T ss_dssp             TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred             cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence            678999999999     999999997332          24455566666  899999997 456889999999999999


Q ss_pred             CC-CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662         63 NK-PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD  141 (221)
Q Consensus        63 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  141 (221)
                      ++ .+.+..+..|...|.+++|+|++.+|++++.|+.|++||+++++.+..+              .+...+..++|+|+
T Consensus       205 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--------------~~~~~~~~~~~~~~  270 (369)
T 3zwl_B          205 SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY--------------ETDCPLNTAVITPL  270 (369)
T ss_dssp             TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--------------ECSSCEEEEEECSS
T ss_pred             CCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee--------------cCCCCceeEEecCC
Confidence            98 6788888889999999999999999999999999999999998877654              26678999999999


Q ss_pred             CCEEEEecCCC--------------eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        142 GDYVACGSENN--------------SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       142 ~~~l~~~~~d~--------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      ++++++++.++              .+++||+.+++....+.               +|...|.+++|+|++++|++++.
T Consensus       271 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------------~~~~~v~~~~~s~~~~~l~s~~~  335 (369)
T 3zwl_B          271 KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ---------------GHFGPLNTVAISPQGTSYASGGE  335 (369)
T ss_dssp             SSEEEEEECCC-------------CEEEEEETTTCCEEEEEE---------------CCSSCEEEEEECTTSSEEEEEET
T ss_pred             CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee---------------cccCcEEEEEECCCCCEEEEEcC
Confidence            99999999988              89999988887665553               68889999999999999999999


Q ss_pred             CCeEEEEECCcc
Q psy10662        208 QGIIKIYVIPIR  219 (221)
Q Consensus       208 dg~i~iw~~~~~  219 (221)
                      ||.|++|+++++
T Consensus       336 dg~v~iw~~~~~  347 (369)
T 3zwl_B          336 DGFIRLHHFEKS  347 (369)
T ss_dssp             TSEEEEEEECHH
T ss_pred             CCeEEEEECccc
Confidence            999999999865

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.6e-32  Score=205.39  Aligned_cols=203  Identities=13%  Similarity=0.163  Sum_probs=164.6

Q ss_pred             CCCceE-EEEeCCCeEEEEEecC-CceeeEEEE--eccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccce----ee
Q psy10662          1 MNSCHL-AFGSADHCVHYYDLRN-TKEALAVFK--GHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLR----SF   71 (221)
Q Consensus         1 ~~~~~l-~~~~~dg~i~i~~~~~-~~~~~~~~~--~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~----~~   71 (221)
                      |++++| ++|+.||.|++||+.. .++.+..+.  .|...|.+++|+|+ ..|++++.+|.+++|++.+++...    .+
T Consensus       112 ~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~  191 (450)
T 2vdu_B          112 SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPI  191 (450)
T ss_dssp             TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCS
T ss_pred             CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceee
Confidence            678886 8999999999999972 355666665  56789999999985 568899999999999998877554    67


Q ss_pred             eccccceeEEEEeCC---CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe
Q psy10662         72 VGHINDKNFVGLATD---GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG  148 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  148 (221)
                      .+|...|.+++|+|+   +++|++++.|+.|++||+++++.+..+            +.+|...|.+++|+ ++++|+++
T Consensus       192 ~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~------------~~~h~~~v~~~~~s-d~~~l~s~  258 (450)
T 2vdu_B          192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW------------LFGHKHFVSSICCG-KDYLLLSA  258 (450)
T ss_dssp             EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE------------CCCCSSCEEEEEEC-STTEEEEE
T ss_pred             ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee------------ecCCCCceEEEEEC-CCCEEEEE
Confidence            789999999999999   899999999999999999888766543            35788999999999 99999999


Q ss_pred             cCCCeEEEEEcCCCCceeeeeeecccccccc----------cccccccccceeEEEEcCCCcEEEEec-CCCeEEEEEC
Q psy10662        149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLER----------DRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVI  216 (221)
Q Consensus       149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~  216 (221)
                      +.|+.|++||+++++.+..+...........          ..........|.+++|+|++++|++++ .|+.|++|++
T Consensus       259 ~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~  337 (450)
T 2vdu_B          259 GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM  337 (450)
T ss_dssp             ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred             eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence            9999999999999988777653221000000          000012345789999999999999998 8999999999

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=8.4e-32  Score=205.00  Aligned_cols=183  Identities=18%  Similarity=0.313  Sum_probs=150.7

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--C-CcEEEecCCCcEEEEEcC------------------
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--K-EDIVSASTDSQLKLWNIN------------------   63 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~l~s~~~d~~v~~wd~~------------------   63 (221)
                      +|++|+.||.|++||+. +++.+..+.+|.+.|.+++|++  + ..+++++.|+.|++||++                  
T Consensus       175 ~l~s~s~dg~i~vwd~~-~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~  253 (464)
T 3v7d_B          175 ILVSGSTDRTVRVWDIK-KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF  253 (464)
T ss_dssp             EEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred             EEEEEeCCCCEEEEECC-CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence            88999999999999998 6778888888999999998873  2 346666666666666654                  


Q ss_pred             ---------------------------------------------CCccceeeeccccceeEEEEeCCCCEEEEecCCCe
Q psy10662         64 ---------------------------------------------KPNCLRSFVGHINDKNFVGLATDGDYVACGSENNS   98 (221)
Q Consensus        64 ---------------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~   98 (221)
                                                                   +++.+..+.+|...|.+++|+|+++++++++.|+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~  333 (464)
T 3v7d_B          254 HTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT  333 (464)
T ss_dssp             SCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred             eccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc
Confidence                                                         33444455578889999999999999999999999


Q ss_pred             EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccc
Q psy10662         99 LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE  178 (221)
Q Consensus        99 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~  178 (221)
                      |++||+++++.+..+             .+|...|.+++|+  ++++++++.||.|++||+.+.......          
T Consensus       334 i~vwd~~~~~~~~~~-------------~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~----------  388 (464)
T 3v7d_B          334 IRIWDLENGELMYTL-------------QGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY----------  388 (464)
T ss_dssp             EEEEETTTTEEEEEE-------------CCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE----------
T ss_pred             EEEEECCCCcEEEEE-------------eCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee----------
Confidence            999999988877654             6788999999997  579999999999999999887654333          


Q ss_pred             ccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        179 RDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       179 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                            .+...+..++|+|++++|++++ ||.|++||+++++
T Consensus       389 ------~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~  423 (464)
T 3v7d_B          389 ------HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK  423 (464)
T ss_dssp             ------ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred             ------cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc
Confidence                  2455677889999999999998 8999999999876

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=4.2e-32  Score=205.74  Aligned_cols=183  Identities=20%  Similarity=0.343  Sum_probs=140.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      +++++|++|+.||.|++||+. +++.+..+.+|.+.|.+++|+ ++.+++++.||.|++||+.+++.+..+.+|...|.+
T Consensus       127 ~~g~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~  204 (445)
T 2ovr_B          127 FCGNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC  204 (445)
T ss_dssp             EETTEEEEEETTSCEEEEETT-TCCEEEECCCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred             EcCCEEEEEECCCcEEEEECC-CCcEEEEEcCCCCCEEEEEec-CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEE
Confidence            367899999999999999998 778888999999999999998 568999999999999999999999999999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      +.|+  ++.+++++.||.|++||+.+++.+..+             .+|...+.+++|  +++++++++.||.|++||++
T Consensus       205 ~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~-------------~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~  267 (445)
T 2ovr_B          205 MHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-------------MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE  267 (445)
T ss_dssp             EEEE--TTEEEEEETTSEEEEEESSSCCEEEEE-------------ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGG
T ss_pred             EEec--CCEEEEEeCCCEEEEEECCCCcEEEEE-------------cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECC
Confidence            9996  568999999999999999988776554             456666666666  45666666667777777666


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      +++.+..+.               +|...|.+++|  +++++++++.||.|++||+.++
T Consensus       268 ~~~~~~~~~---------------~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~  309 (445)
T 2ovr_B          268 TETCLHTLQ---------------GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG  309 (445)
T ss_dssp             GTEEEEEEC---------------CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC
T ss_pred             CCcEeEEec---------------CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC
Confidence            554443332               34444555554  4445555555555555555443

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.3e-32  Score=203.07  Aligned_cols=204  Identities=12%  Similarity=0.195  Sum_probs=162.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEecC-----CcEEEecCCCcEEEEEcCCCccceeee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLNK-----EDIVSASTDSQLKLWNINKPNCLRSFV   72 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~-----~~l~s~~~d~~v~~wd~~~~~~~~~~~   72 (221)
                      ...+++++.++.|++||+. .++.+..+..     |...|.+++|+|+     ..|++++.||.|++||+.+++.+..+.
T Consensus        34 ~~~~~~~~~~~~v~vw~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~  112 (366)
T 3k26_A           34 DPLVFATVGSNRVTLYECH-SQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV  112 (366)
T ss_dssp             SCEEEEEEETTEEEEEEEC-GGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE
T ss_pred             CceEEEECCCCEEEEEEcC-CCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec
Confidence            3456666677799999998 5555566654     4477999999975     359999999999999999999999999


Q ss_pred             ccccceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         73 GHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        73 ~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      +|...|.+++|+| ++.++++++.||.|++||+++++.+..+          ..+.+|...|.+++|+|++++|++++.|
T Consensus       113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~l~~~~~d  182 (366)
T 3k26_A          113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF----------GGVEGHRDEVLSADYDLLGEKIMSCGMD  182 (366)
T ss_dssp             SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE----------CSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe----------cccccccCceeEEEECCCCCEEEEecCC
Confidence            9999999999999 8999999999999999999988776553          1124688899999999999999999999


Q ss_pred             CeEEEEEcCCCCceeeeee----eccc---------ccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        152 NSLYIYYKGLSKHMHAYRF----DTVR---------SMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~----~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      |.|++||+++++....+..    .+..         ...........|...|.+++|+  +++|++++.||.|++||+.+
T Consensus       183 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~  260 (366)
T 3k26_A          183 HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGK  260 (366)
T ss_dssp             SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESS
T ss_pred             CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCC
Confidence            9999999987765433221    0000         0011112233588899999998  78999999999999999876


Q ss_pred             c
Q psy10662        219 R  219 (221)
Q Consensus       219 ~  219 (221)
                      +
T Consensus       261 ~  261 (366)
T 3k26_A          261 M  261 (366)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=8.2e-32  Score=225.97  Aligned_cols=202  Identities=18%  Similarity=0.289  Sum_probs=175.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |++++|++|+.||.|++||+. +++.+..+.+|...|.+++|+|+   ..+++++.|+.|++||+++++.+..+.+|...
T Consensus       667 ~~~~~l~s~~~d~~v~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~  745 (1249)
T 3sfz_A          667 SDDSYIATCSADKKVKIWDSA-TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNS  745 (1249)
T ss_dssp             TTSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSC
T ss_pred             cCCCEEEEEeCCCeEEEEECC-CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCC
Confidence            689999999999999999998 78889999999999999999973   24889999999999999999999999999999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe-----------------------------------------e
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF-----------------------------------------D  116 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----------------------------------------~  116 (221)
                      |.+++|+|+++++++++.||.|++||+.+++....+..                                         +
T Consensus       746 v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d  825 (1249)
T 3sfz_A          746 VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD  825 (1249)
T ss_dssp             EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred             EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence            99999999999999999999999999988877665531                                         1


Q ss_pred             cccceeEeeE-EEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE
Q psy10662        117 TVRSMLESSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW  195 (221)
Q Consensus       117 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  195 (221)
                      .........+ .+|...+.+++|+|+++++++++.|+.|++||+.++.....+               .+|...|.+++|
T Consensus       826 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~---------------~~h~~~v~~v~~  890 (1249)
T 3sfz_A          826 IHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADC---------------RGHLSWVHGVMF  890 (1249)
T ss_dssp             TTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEE---------------CCCSSCEEEEEE
T ss_pred             ecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeec---------------CCCccceEEEEE
Confidence            1222222222 267788999999999999999999999999999887665544               378889999999


Q ss_pred             cCCCcEEEEecCCCeEEEEECCc
Q psy10662        196 RQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       196 ~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +|+|++|++++.||.|++|++.+
T Consensus       891 spdg~~l~s~s~dg~v~vw~~~~  913 (1249)
T 3sfz_A          891 SPDGSSFLTASDDQTIRVWETKK  913 (1249)
T ss_dssp             CTTSSEEEEEETTSCEEEEEHHH
T ss_pred             CCCCCEEEEEeCCCeEEEEEccc
Confidence            99999999999999999999754

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.5e-32  Score=205.41  Aligned_cols=162  Identities=15%  Similarity=0.198  Sum_probs=137.7

Q ss_pred             CceEEEEEecCC-cE-EEecCCCcEEEEEcC--CCccceeee--ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCe
Q psy10662         35 KAVSYVKFLNKE-DI-VSASTDSQLKLWNIN--KPNCLRSFV--GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK  108 (221)
Q Consensus        35 ~~i~~~~~~~~~-~l-~s~~~d~~v~~wd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~  108 (221)
                      +.|.+++|+|++ .| ++++.||.|++||+.  +++.+..+.  .|...|.+++|+|++++|++++.+|.+.+|++.+++
T Consensus       103 ~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~  182 (450)
T 2vdu_B          103 SYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIP  182 (450)
T ss_dssp             CCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred             CceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence            369999999855 44 788899999999999  888887775  456889999999999999999999999999998765


Q ss_pred             eeEEEEeecccceeEeeEEEeeCceEEEEEecC---CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccc
Q psy10662        109 HMHAYRFDTVRSMLESSFVGHINDKNFVGLATD---GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD  185 (221)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (221)
                      ....         ....+.+|...|.+++|+|+   +++|++++.|+.|++||+++++.+..+              ..+
T Consensus       183 ~~~~---------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~--------------~~~  239 (450)
T 2vdu_B          183 EEKF---------TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW--------------LFG  239 (450)
T ss_dssp             CSSC---------CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE--------------CCC
T ss_pred             cccc---------cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee--------------ecC
Confidence            4320         11235688999999999999   999999999999999999887765442              136


Q ss_pred             cccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        186 TNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       186 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |...|.+++|+ ++++|++++.|+.|++||+.+++
T Consensus       240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~  273 (450)
T 2vdu_B          240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK  273 (450)
T ss_dssp             CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred             CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence            88899999999 99999999999999999998875

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.7e-32  Score=217.86  Aligned_cols=196  Identities=17%  Similarity=0.186  Sum_probs=163.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCc--cceeeeccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPN--CLRSFVGHI   75 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~~   75 (221)
                      +++|++|+.||.|++||+. +++  .+..+..|...|.+++|+|+   ..+++++.||.|++||++++.  ....+..|.
T Consensus        67 ~~~l~s~s~Dg~I~vwd~~-~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~  145 (753)
T 3jro_A           67 GTILASCSYDGKVLIWKEE-NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA  145 (753)
T ss_dssp             CSEEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCS
T ss_pred             CCEEEEEeCCCeEEEEECC-CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCC
Confidence            8999999999999999998 454  66778889999999999974   569999999999999998873  344567889


Q ss_pred             cceeEEEEeC-------------CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-
Q psy10662         76 NDKNFVGLAT-------------DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-  141 (221)
Q Consensus        76 ~~v~~~~~~~-------------~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-  141 (221)
                      ..|.+++|+|             ++.++++++.||.|++||++++....         .....+.+|...|++++|+|+ 
T Consensus       146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~---------~~~~~~~~h~~~V~~l~~sp~~  216 (753)
T 3jro_A          146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY---------VLESTLEGHSDWVRDVAWSPTV  216 (753)
T ss_dssp             SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE---------EEEEEECCCSSCEEEEEECCCC
T ss_pred             CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc---------eeeeeecCCCCcEEEEEeccCC
Confidence            9999999999             58899999999999999998764321         123446788999999999999 


Q ss_pred             --CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        142 --GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       142 --~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                        ++++++++.||.|++||+.++.....          ........|...|.+++|+|+|++|++++.||.|++|++.+
T Consensus       217 ~~~~~l~s~s~Dg~I~iwd~~~~~~~~~----------~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          217 LLRSYLASVSQDRTCIIWTQDNEQGPWK----------KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             SSSEEEEEEESSSCEEEEEESSSSSCCB----------CCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred             CCCCEEEEEecCCEEEEecCCCCCCcce----------eEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence              89999999999999999987642111          11223345788899999999999999999999999999984

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=7e-31  Score=199.05  Aligned_cols=202  Identities=18%  Similarity=0.316  Sum_probs=165.7

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      +++.|++|+.||.|++||+. +++.+..+.+|...|.+++| .+..+++++.||.|++||+++++.+..+.+|...|.++
T Consensus       208 ~~~~l~s~s~dg~i~~wd~~-~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~  285 (445)
T 2ovr_B          208 HEKRVVSGSRDATLRVWDIE-TGQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL  285 (445)
T ss_dssp             ETTEEEEEETTSEEEEEESS-SCCEEEEEECCSSCEEEEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE
T ss_pred             cCCEEEEEeCCCEEEEEECC-CCcEEEEEcCCcccEEEEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEE
Confidence            35678888899999999987 67777888888888999888 56678888999999999998888888888888889998


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------------------------eecccceeEeeEEE---eeC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------------------------FDTVRSMLESSFVG---HIN  131 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~---~~~  131 (221)
                      .|  ++.++++++.|+.|++||+++++.+..+.                           |+.........+..   |..
T Consensus       286 ~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~  363 (445)
T 2ovr_B          286 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS  363 (445)
T ss_dssp             EE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS
T ss_pred             EE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC
Confidence            88  67889999999999999998887776553                           44445555555554   778


Q ss_pred             ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCe-
Q psy10662        132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGI-  210 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-  210 (221)
                      .|.+++|+  ++++++|+.||.|++||+.+++.+..+...          ....|...|.+++|+|++.+|++++.||. 
T Consensus       364 ~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~v~~~~~s~~~~~la~~~~dg~~  431 (445)
T 2ovr_B          364 AVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTL----------ESGGSGGVVWRIRASNTKLVCAVGSRNGTE  431 (445)
T ss_dssp             CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEEC----------TTGGGTCEEEEEEECSSEEEEEEECSSSSS
T ss_pred             CEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeecc----------ccCCCCceEEEEEecCCEEEEEEcccCCCC
Confidence            89999986  579999999999999999998877665311          11257788999999999999999999997 


Q ss_pred             ---EEEEECCcc
Q psy10662        211 ---IKIYVIPIR  219 (221)
Q Consensus       211 ---i~iw~~~~~  219 (221)
                         |.+||+...
T Consensus       432 ~~~l~v~df~~~  443 (445)
T 2ovr_B          432 ETKLLVLDFDVD  443 (445)
T ss_dssp             CCEEEEEECCCC
T ss_pred             ccEEEEEECCCC
Confidence               999999753

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=4.5e-31  Score=194.66  Aligned_cols=203  Identities=15%  Similarity=0.116  Sum_probs=152.4

Q ss_pred             CCceE-EEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC----------------------------------
Q psy10662          2 NSCHL-AFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE----------------------------------   46 (221)
Q Consensus         2 ~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------------------------   46 (221)
                      +++.+ ++|+.|+.|++||+. +++++..+. +...|.+++|+++.                                  
T Consensus        69 ~~~~~~~~~~~d~~v~iWd~~-~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s  146 (355)
T 3vu4_A           69 RTNYVAFVTGVKEVVHIWDDV-KKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFS  146 (355)
T ss_dssp             TSSEEEEECSSTTEEEEEETT-TTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEE
T ss_pred             CCCEEEEEECCccEEEEEECC-CCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEE
Confidence            34445 577888999999998 677777776 67788888887532                                  


Q ss_pred             --cEEE--ecCCCcEEEEEcCCCc----------------cceeeeccccceeEEEEeCCCCEEEEecCCCe-EEEEECC
Q psy10662         47 --DIVS--ASTDSQLKLWNINKPN----------------CLRSFVGHINDKNFVGLATDGDYVACGSENNS-LYIYYKG  105 (221)
Q Consensus        47 --~l~s--~~~d~~v~~wd~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-v~iwd~~  105 (221)
                        .++.  ++.||.|++||+++++                .+..+.+|...|.+++|+|++++|++++.|++ |++||++
T Consensus       147 ~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~  226 (355)
T 3vu4_A          147 NGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE  226 (355)
T ss_dssp             TTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred             ccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence              2333  5789999999998765                26778899999999999999999999999998 9999999


Q ss_pred             CCeeeEEEEeecccceeEeeEE-E-eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc--------cc
Q psy10662        106 LSKHMHAYRFDTVRSMLESSFV-G-HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV--------RS  175 (221)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--------~~  175 (221)
                      +++.+..+             . + |...|.+++|+|++++|++++.|+.|++||++.........+...        ..
T Consensus       227 ~~~~~~~~-------------~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (355)
T 3vu4_A          227 DGVLVREF-------------RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEW  293 (355)
T ss_dssp             TCCEEEEE-------------ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSS
T ss_pred             CCcEEEEE-------------EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccc
Confidence            98887664             4 4 889999999999999999999999999999976543221111000        00


Q ss_pred             cccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        176 MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .................++|++++++|++++.||.+++|++..+
T Consensus       294 ~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~  337 (355)
T 3vu4_A          294 SLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD  337 (355)
T ss_dssp             CSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred             ceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence            00000001112233467999999999999999999999998754

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=9.1e-32  Score=210.94  Aligned_cols=188  Identities=15%  Similarity=0.158  Sum_probs=162.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc----eeeEEEEeccCc-eEEEEEec--CC-cEEEecCCCcEEEEEcCCC-------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK----EALAVFKGHRKA-VSYVKFLN--KE-DIVSASTDSQLKLWNINKP-------   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~~~-i~~~~~~~--~~-~l~s~~~d~~v~~wd~~~~-------   65 (221)
                      ||+++|++++ ++.|++||+. ++    +....+.+|... |++++|+|  ++ .|++++.||.|++||+.++       
T Consensus        28 pdg~~l~~~~-~~~v~v~~~~-~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~  105 (615)
T 1pgu_A           28 PTTNAIAYPC-GKSAFVRCLD-DGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVE  105 (615)
T ss_dssp             TTTTEEEEEE-TTEEEEEECC-SSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEE
T ss_pred             CCCCEEEEec-CCeEEEEECC-CCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccccc
Confidence            6899999998 8899999998 66    778889999999 99999998  65 4889999999999999754       


Q ss_pred             -ccceeeeccccceeEEEEeCCCCEEEEecCC----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         66 -NCLRSFVGHINDKNFVGLATDGDYVACGSEN----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        66 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                       +....+..|...|.+++|+|+++++++++.+    +.|.+||  .++.+.             .+.+|...|.+++|+|
T Consensus       106 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~-------------~~~~~~~~v~~~~~~~  170 (615)
T 1pgu_A          106 VNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLG-------------EVSGHSQRINACHLKQ  170 (615)
T ss_dssp             EEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEE-------------ECCSCSSCEEEEEECS
T ss_pred             ccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcce-------------eeecCCccEEEEEECC
Confidence             6666777899999999999999999999887    6888888  344433             3468899999999999


Q ss_pred             CCC-EEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccc---ceeEEEEcCC-CcEEEEecCCCeEEEEE
Q psy10662        141 DGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNE---FVSAVCWRQL-SRVLVAANSQGIIKIYV  215 (221)
Q Consensus       141 ~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~dg~i~iw~  215 (221)
                      +++ .+++++.|+.|++||+.+.+....+.               .|..   .|.+++|+|+ +++|++++.||.|++||
T Consensus       171 ~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---------------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd  235 (615)
T 1pgu_A          171 SRPMRSMTVGDDGSVVFYQGPPFKFSASDR---------------THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD  235 (615)
T ss_dssp             SSSCEEEEEETTTEEEEEETTTBEEEEEEC---------------SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred             CCCcEEEEEeCCCcEEEEeCCCcceeeeec---------------ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence            998 89999999999999988776655443               5666   8999999999 99999999999999999


Q ss_pred             CCccc
Q psy10662        216 IPIRV  220 (221)
Q Consensus       216 ~~~~~  220 (221)
                      +.+++
T Consensus       236 ~~~~~  240 (615)
T 1pgu_A          236 GKSGE  240 (615)
T ss_dssp             TTTCC
T ss_pred             CCCCC
Confidence            98764

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=8e-31  Score=191.79  Aligned_cols=199  Identities=13%  Similarity=0.176  Sum_probs=148.4

Q ss_pred             EEEeCCCe--EEEEEecC-CceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCc-----cceeeecccc
Q psy10662          7 AFGSADHC--VHYYDLRN-TKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPN-----CLRSFVGHIN   76 (221)
Q Consensus         7 ~~~~~dg~--i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~-----~~~~~~~~~~   76 (221)
                      .+|...|+  ++++...+ +..+..++++|.+.|++|+|+|+  ..|+||+.|++|++||+.+.+     +...+.+|..
T Consensus         8 ~~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~   87 (340)
T 4aow_A            8 SSGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH   87 (340)
T ss_dssp             ------------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSS
T ss_pred             ccccCCCCccEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCC
Confidence            44544454  33334331 23455689999999999999984  468899999999999997654     3456788999


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------------eecccc-eeEeeE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRS-MLESSF  126 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~-~~~~~~  126 (221)
                      .|.+++|+|+++++++++.|+.|++|+...........                             |+.... ......
T Consensus        88 ~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~  167 (340)
T 4aow_A           88 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD  167 (340)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred             CEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEe
Confidence            99999999999999999999999999998876655443                             111111 112233


Q ss_pred             EEeeCceEEEEEecCC--CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE
Q psy10662        127 VGHINDKNFVGLATDG--DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA  204 (221)
Q Consensus       127 ~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  204 (221)
                      .+|...+..++|++++  .++++++.|+.|++||+++.+....+.               +|...|++++|+|++++|++
T Consensus       168 ~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~---------------~h~~~v~~~~~s~~~~~l~s  232 (340)
T 4aow_A          168 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI---------------GHTGYLNTVTVSPDGSLCAS  232 (340)
T ss_dssp             SSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC---------------CCSSCEEEEEECTTSSEEEE
T ss_pred             ccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec---------------CCCCcEEEEEECCCCCEEEE
Confidence            4677889999998764  578899999999999998877655443               68889999999999999999


Q ss_pred             ecCCCeEEEEECCccc
Q psy10662        205 ANSQGIIKIYVIPIRV  220 (221)
Q Consensus       205 ~~~dg~i~iw~~~~~~  220 (221)
                      ++.||.|++||+.+++
T Consensus       233 ~s~Dg~i~iwd~~~~~  248 (340)
T 4aow_A          233 GGKDGQAMLWDLNEGK  248 (340)
T ss_dssp             EETTCEEEEEETTTTE
T ss_pred             EeCCCeEEEEEeccCc
Confidence            9999999999998754

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=4.5e-31  Score=206.99  Aligned_cols=192  Identities=13%  Similarity=0.143  Sum_probs=164.1

Q ss_pred             CCceEEEEeCCCeEEEEEecCC-------ceeeEEEEeccCceEEEEEecCC-cEEEecCC----CcEEEEEcCCCccce
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNT-------KEALAVFKGHRKAVSYVKFLNKE-DIVSASTD----SQLKLWNINKPNCLR   69 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d----~~v~~wd~~~~~~~~   69 (221)
                      ++++|++|+.||.|++||+.+.       .+....+..|..+|.+++|+|++ .|++++.+    +.|++||  .++.+.
T Consensus        77 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~  154 (615)
T 1pgu_A           77 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLG  154 (615)
T ss_dssp             TCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEE
T ss_pred             CCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcce
Confidence            8999999999999999999622       36677888899999999999854 57788777    6888888  567778


Q ss_pred             eeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC---ceEEEEEecC-CCE
Q psy10662         70 SFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN---DKNFVGLATD-GDY  144 (221)
Q Consensus        70 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~  144 (221)
                      .+.+|...|.+++|+|+++ .+++++.|+.|++||+.+++.+..+             .+|..   .|.+++|+|+ +++
T Consensus       155 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~-------------~~~~~~~~~v~~~~~~~~~~~~  221 (615)
T 1pgu_A          155 EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD-------------RTHHKQGSFVRDVEFSPDSGEF  221 (615)
T ss_dssp             ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE-------------CSSSCTTCCEEEEEECSTTCCE
T ss_pred             eeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee-------------cccCCCCceEEEEEECCCCCCE
Confidence            8889999999999999998 7999999999999999888776554             56777   8999999999 999


Q ss_pred             EEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        145 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       145 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |++++.|+.|++||+++++.+..+..           ....|...|.+++|+ ++++|++++.|+.|++||+.+++
T Consensus       222 l~~~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~  285 (615)
T 1pgu_A          222 VITVGSDRKISCFDGKSGEFLKYIED-----------DQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSK  285 (615)
T ss_dssp             EEEEETTCCEEEEETTTCCEEEECCB-----------TTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTE
T ss_pred             EEEEeCCCeEEEEECCCCCEeEEecc-----------cccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCc
Confidence            99999999999999988776554410           001577899999999 99999999999999999998764

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=8.5e-31  Score=193.19  Aligned_cols=197  Identities=12%  Similarity=0.151  Sum_probs=146.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcE-EEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      |||++|++|+.++ +++|++. ..+......  ...+..+++.+ ++.+ ++++.|+.|++||+.+++.+..+. +...|
T Consensus        29 ~dg~~la~g~~~~-~~iw~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v  103 (355)
T 3vu4_A           29 QDQSCLILSTLKS-FEIYNVH-PVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPV  103 (355)
T ss_dssp             TTSSEEEEECSSE-EEEEEET-TEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCE
T ss_pred             CCCCEEEEEcCCE-EEEEecC-Ccceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCce
Confidence            6899999998775 7899997 555444433  23577778875 3444 578889999999999999888876 66789


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCC-eeeEEE--------------------------Eeecccce----------
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLS-KHMHAY--------------------------RFDTVRSM----------  121 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~--------------------------~~~~~~~~----------  121 (221)
                      .+++|+++.  ++++ .++.|++||+.+. +.+..+                          -|+.....          
T Consensus       104 ~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~  180 (355)
T 3vu4_A          104 KDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQ  180 (355)
T ss_dssp             EEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------
T ss_pred             EEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccccccccc
Confidence            999998753  2222 2445666665544 111100                          01222111          


Q ss_pred             -----e-EeeEEEeeCceEEEEEecCCCEEEEecCCCe-EEEEEcCCCCceeeeeeecccccccccccccc-cccceeEE
Q psy10662        122 -----L-ESSFVGHINDKNFVGLATDGDYVACGSENNS-LYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD-TNEFVSAV  193 (221)
Q Consensus       122 -----~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~  193 (221)
                           + ...+.+|...|.+++|+|++++|++|+.|+. |++||+++++.+..+.              .+ |...|.++
T Consensus       181 ~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~--------------~g~h~~~v~~~  246 (355)
T 3vu4_A          181 QKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR--------------RGLDRADVVDM  246 (355)
T ss_dssp             ------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE--------------CTTCCSCEEEE
T ss_pred             ccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE--------------cCCCCCcEEEE
Confidence                 1 4567889999999999999999999999998 9999999888776653              13 78899999


Q ss_pred             EEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        194 CWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       194 ~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      +|+|+|++|++++.|+.|++||++.+
T Consensus       247 ~~s~~~~~l~s~s~d~~v~iw~~~~~  272 (355)
T 3vu4_A          247 KWSTDGSKLAVVSDKWTLHVFEIFND  272 (355)
T ss_dssp             EECTTSCEEEEEETTCEEEEEESSCC
T ss_pred             EECCCCCEEEEEECCCEEEEEEccCC
Confidence            99999999999999999999999754

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-31  Score=217.58  Aligned_cols=202  Identities=9%  Similarity=0.094  Sum_probs=149.3

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEE-----------------------------------------EEeccCceEEEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAV-----------------------------------------FKGHRKAVSYVK   41 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~-----------------------------------------~~~~~~~i~~~~   41 (221)
                      +..+++++.||.|++|++. ++.....                                         +.+|...+.+++
T Consensus       364 ~~~l~~~s~dg~l~~~~~~-~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~  442 (902)
T 2oaj_A          364 PGLILLILGNGEIETMLYP-SGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKL  442 (902)
T ss_dssp             CSEEEEEETTSCEEEEETT-TCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCC
T ss_pred             ceeEEEEcCCCcEEEEECC-CCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccc
Confidence            3478888899999999985 3322111                                         123334444555


Q ss_pred             Eec-CCcEEEecCCCcEEEEEcCCCccc--eee---------eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee
Q psy10662         42 FLN-KEDIVSASTDSQLKLWNINKPNCL--RSF---------VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH  109 (221)
Q Consensus        42 ~~~-~~~l~s~~~d~~v~~wd~~~~~~~--~~~---------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  109 (221)
                      |+| ++.|++|+.|++|++||+.++...  ..+         .+|...|.+++|+|++++||+|+.||+|++||+.+++.
T Consensus       443 ~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~  522 (902)
T 2oaj_A          443 PAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQF  522 (902)
T ss_dssp             CCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC
T ss_pred             ccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccc
Confidence            566 456999999999999999887432  111         16888999999999999999999999999999976632


Q ss_pred             eEE----------EEee---c-------------------ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662        110 MHA----------YRFD---T-------------------VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus       110 ~~~----------~~~~---~-------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      ...          +.+.   .                   ...+++..+.+|...|++++|+|+| +||+|+.|+.|++|
T Consensus       523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lw  601 (902)
T 2oaj_A          523 YSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLI  601 (902)
T ss_dssp             ---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEE
T ss_pred             cCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEE
Confidence            100          0000   0                   0013456677899999999999999 99999999999999


Q ss_pred             EcCCCCceeeeeeeccccccccccccc-ccccceeEEEEc-----CCC---cEEEEecCCCeEEEEEC
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNED-DTNEFVSAVCWR-----QLS---RVLVAANSQGIIKIYVI  216 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~-----~~~---~~l~~~~~dg~i~iw~~  216 (221)
                      |+++...+....          ...+. +|...|++++|+     |||   ++|++|+.|++|++|++
T Consensus       602 d~~~~~~~~~~~----------~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~  659 (902)
T 2oaj_A          602 DRRGPAIIYMEN----------IREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI  659 (902)
T ss_dssp             ETTTTEEEEEEE----------GGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred             ECCCCeEEEEee----------hhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence            987665432211          12333 789999999999     885   89999999999999999

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.98  E-value=2.1e-30  Score=209.35  Aligned_cols=201  Identities=17%  Similarity=0.238  Sum_probs=169.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCC-ccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKP-NCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~-~~~~~~~~~~~~v   78 (221)
                      |++++|++|+.||.|++||+. +++.+..+.+|.+.|++++|+|++ .|++++.||.|++||++++ .....+.+|...|
T Consensus        65 ~~~~~l~~~~~dg~i~vw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v  143 (814)
T 3mkq_A           65 ARKNWIIVGSDDFRIRVFNYN-TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV  143 (814)
T ss_dssp             GGGTEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCE
T ss_pred             CCCCEEEEEeCCCeEEEEECC-CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcE
Confidence            678999999999999999998 778888999999999999999854 6999999999999999887 6667778899999


Q ss_pred             eEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------------------eecccceeEee
Q psy10662         79 NFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------------FDTVRSMLESS  125 (221)
Q Consensus        79 ~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~  125 (221)
                      .+++|+| ++..+++++.||.|++||+.+++....+.                                |+.........
T Consensus       144 ~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~  223 (814)
T 3mkq_A          144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT  223 (814)
T ss_dssp             EEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEE
T ss_pred             EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence            9999999 88899999999999999987665444332                                34444555666


Q ss_pred             EEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc--EEE
Q psy10662        126 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR--VLV  203 (221)
Q Consensus       126 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~  203 (221)
                      +.+|...+.+++|+|+++++++++.||.|++||+.+++....+.               .|...+.+++|+|+++  +++
T Consensus       224 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~~~~~  288 (814)
T 3mkq_A          224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN---------------VGLERSWCIATHPTGRKNYIA  288 (814)
T ss_dssp             EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEEC---------------CSSSSEEEEEECTTCGGGEEE
T ss_pred             EcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee---------------cCCCcEEEEEEccCCCceEEE
Confidence            77888999999999999999999999999999998887665553               4667899999999987  355


Q ss_pred             EecCCCeEEEEECCc
Q psy10662        204 AANSQGIIKIYVIPI  218 (221)
Q Consensus       204 ~~~~dg~i~iw~~~~  218 (221)
                      ++ .++.+.+|++..
T Consensus       289 ~~-~~~~~~~~~~~~  302 (814)
T 3mkq_A          289 SG-FDNGFTVLSLGN  302 (814)
T ss_dssp             EE-ETTEEEEEECSC
T ss_pred             EE-eCCCEEEEEcCC
Confidence            54 567788898764

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.98  E-value=3.3e-31  Score=196.01  Aligned_cols=189  Identities=8%  Similarity=0.029  Sum_probs=143.9

Q ss_pred             EEeCCCeEEEEEecCCceeeEEEE--------eccCceEEEEEecCCc-EE--EecCCCcEEEEEcCCCccceeeecccc
Q psy10662          8 FGSADHCVHYYDLRNTKEALAVFK--------GHRKAVSYVKFLNKED-IV--SASTDSQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         8 ~~~~dg~i~i~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~-l~--s~~~d~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      +|+.|+.+++|++......+....        .+...+.+++|+|++. ++  +++.|++|++||+++++++..+. |..
T Consensus        99 s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~  177 (365)
T 4h5i_A           99 QGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRG  177 (365)
T ss_dssp             HTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSS
T ss_pred             EecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCC
Confidence            345678899999874433332222        2345689999998655 44  45579999999999999888875 778


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC----
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN----  152 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----  152 (221)
                      .|.+++|+|+|+++++++.++ +.+|+..+++.+...           ....|...+.+++|+|+++++++++.|+    
T Consensus       178 ~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~  245 (365)
T 4h5i_A          178 EVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARK-----------TDFDKNWSLSKINFIADDTVLIAASLKKGKGI  245 (365)
T ss_dssp             CCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEE-----------CCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred             ceEEEEEccCCceEEecccee-EEEEEeccCcceeee-----------ecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence            899999999999999998665 667777666654332           2345677899999999999999998887    


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+++|++.........           ...+.+|...|++++|+|+|++|++|+.|+.|++||+++++
T Consensus       246 ~i~~~~~~~~~~~~~~-----------~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~  302 (365)
T 4h5i_A          246 VLTKISIKSGNTSVLR-----------SKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS  302 (365)
T ss_dssp             EEEEEEEETTEEEEEE-----------EEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred             EEeecccccceeccee-----------eeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc
Confidence            6788887655432111           11234678899999999999999999999999999998865

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.98  E-value=1.1e-30  Score=191.19  Aligned_cols=188  Identities=15%  Similarity=0.223  Sum_probs=147.8

Q ss_pred             EEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC----ccceeeeccccceeEEEEeC--CCCEEEEecCCCeEE
Q psy10662         28 AVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP----NCLRSFVGHINDKNFVGLAT--DGDYVACGSENNSLY  100 (221)
Q Consensus        28 ~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~  100 (221)
                      ..+.+|.+.|++++|+|+ ..|++++.||.|++||+.++    +....+.+|...|.+++|+|  ++++|++++.||.|+
T Consensus         5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~   84 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK   84 (351)
T ss_dssp             CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred             ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence            456789999999999985 56999999999999999876    35566678999999999999  589999999999999


Q ss_pred             EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC--CCEEEEecCCCeEEEEEcCCCCceeeeeee-------
Q psy10662        101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFD-------  171 (221)
Q Consensus       101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-------  171 (221)
                      +||+++++...    ..........+..|...+.+++|+|+  ++++++++.||.|++||+++.+.+..+...       
T Consensus        85 vwd~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~  160 (351)
T 3f3f_A           85 LWEEDPDQEEC----SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS  160 (351)
T ss_dssp             EEEECTTSCTT----SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred             EEecCCCcccc----cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence            99998764210    00011233445788999999999999  999999999999999999877654433211       


Q ss_pred             ----------------c----------------------ccccccccccccccccceeEEEEcCCC----cEEEEecCCC
Q psy10662        172 ----------------T----------------------VRSMLERDRNEDDTNEFVSAVCWRQLS----RVLVAANSQG  209 (221)
Q Consensus       172 ----------------~----------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg  209 (221)
                                      +                      ..........+.+|...|.+++|+|++    ++|++++.||
T Consensus       161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg  240 (351)
T 3f3f_A          161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG  240 (351)
T ss_dssp             CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred             cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence                            0                      001111234456788999999999998    8999999999


Q ss_pred             eEEEEECCcc
Q psy10662        210 IIKIYVIPIR  219 (221)
Q Consensus       210 ~i~iw~~~~~  219 (221)
                      .|++||+.++
T Consensus       241 ~i~iwd~~~~  250 (351)
T 3f3f_A          241 RIRIFKITEK  250 (351)
T ss_dssp             CEEEEEEEEC
T ss_pred             eEEEEeCCCC
Confidence            9999999764

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.98  E-value=9.7e-31  Score=193.01  Aligned_cols=184  Identities=13%  Similarity=0.168  Sum_probs=149.2

Q ss_pred             CceeeEEEEeccCceEEEEEecC----CcEEEecCCCcEEEEEcCC-Cccc-eeeeccccceeEEEEeCCCCEEEEecCC
Q psy10662         23 TKEALAVFKGHRKAVSYVKFLNK----EDIVSASTDSQLKLWNINK-PNCL-RSFVGHINDKNFVGLATDGDYVACGSEN   96 (221)
Q Consensus        23 ~~~~~~~~~~~~~~i~~~~~~~~----~~l~s~~~d~~v~~wd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d   96 (221)
                      ..+.+..+.+|.+.|++++|+|+    ..|++++.||.|++||+.+ +..+ ..+.+|...|.+++|+|++++|++++.|
T Consensus        28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d  107 (368)
T 3mmy_A           28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD  107 (368)
T ss_dssp             TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred             CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence            45567778899999999999986    5699999999999999987 5444 6678899999999999999999999999


Q ss_pred             CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEE--ecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc-
Q psy10662         97 NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL--ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV-  173 (221)
Q Consensus        97 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-  173 (221)
                      |.|++||+++++.+.              ...|...|.+++|  +|++++|++++.||.|++||+++++.+..+..... 
T Consensus       108 g~v~iwd~~~~~~~~--------------~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~  173 (368)
T 3mmy_A          108 KTAKMWDLSSNQAIQ--------------IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERC  173 (368)
T ss_dssp             SEEEEEETTTTEEEE--------------EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCE
T ss_pred             CcEEEEEcCCCCcee--------------eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCc
Confidence            999999999887654              3578899999999  88999999999999999999988776544431100 


Q ss_pred             ---------------------------------------------------------------cc---cc--------cc
Q psy10662        174 ---------------------------------------------------------------RS---ML--------ER  179 (221)
Q Consensus       174 ---------------------------------------------------------------~~---~~--------~~  179 (221)
                                                                                     ..   .+        ..
T Consensus       174 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~  253 (368)
T 3mmy_A          174 YCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD  253 (368)
T ss_dssp             EEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred             eEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence                                                                           00   00        11


Q ss_pred             ccccccccc------------ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        180 DRNEDDTNE------------FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       180 ~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ...+..|..            .|.+++|+|++++|++++.||.|++||+.+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~  306 (368)
T 3mmy_A          254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART  306 (368)
T ss_dssp             SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred             ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc
Confidence            112233443            69999999999999999999999999998764

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.98  E-value=2.1e-30  Score=196.65  Aligned_cols=182  Identities=14%  Similarity=0.068  Sum_probs=148.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC-----ceEEEEEecC-CcEEEecCCCcEEEEEcCCCcc-------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK-----AVSYVKFLNK-EDIVSASTDSQLKLWNINKPNC-------   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~-------   67 (221)
                      |||.+||+++.||.|++||..  . ++..+. |..     .|.+++|+|+ +.|++|+.||+|++||+.++..       
T Consensus        95 PdG~~LAs~s~dg~V~iwd~~--~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~  170 (588)
T 2j04_A           95 PIDDWMAVLSNNGNVSVFKDN--K-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF  170 (588)
T ss_dssp             SSSSCEEEEETTSCEEEEETT--E-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE
T ss_pred             CCCCEEEEEeCCCcEEEEeCC--c-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee
Confidence            799999999999999999965  2 566666 665     4999999984 5699999999999999988753       


Q ss_pred             ceee----eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeE-EEeeCceEEEEEecCC
Q psy10662         68 LRSF----VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSF-VGHINDKNFVGLATDG  142 (221)
Q Consensus        68 ~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~  142 (221)
                      +..+    .+|.+.|.+++|+|+|  +++++.|+.|++||+..++...          ....+ .+|...|.+++|+  +
T Consensus       171 l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~----------~~~tL~~~h~~~V~svaFs--g  236 (588)
T 2j04_A          171 ESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP----------VSRMIQNASRRKITDLKIV--D  236 (588)
T ss_dssp             EEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC----------CEEEEECCCSSCCCCEEEE--T
T ss_pred             eeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc----------ceeeecccccCcEEEEEEE--C
Confidence            4555    5677899999999999  8888899999999998766310          01123 3677899999999  6


Q ss_pred             CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE--cCCCcEEEEecCCCeEEEEECC
Q psy10662        143 DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW--RQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +.||+++ ++.|++||+..++.....               .+|...|..+.|  +|++..|++++.||+ ++|..+
T Consensus       237 ~~LASa~-~~tIkLWd~~~~~~~~~~---------------~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d  296 (588)
T 2j04_A          237 YKVVLTC-PGYVHKIDLKNYSISSLK---------------TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED  296 (588)
T ss_dssp             TEEEEEC-SSEEEEEETTTTEEEEEE---------------CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred             CEEEEEe-CCeEEEEECCCCeEEEEE---------------cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence            8888887 699999998876542111               168889999999  999999999999999 999874

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.98  E-value=1.5e-29  Score=190.55  Aligned_cols=191  Identities=17%  Similarity=0.273  Sum_probs=156.4

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      +++||+|. |++|+|||.. +++....+.  .|...|++++|+|+ .+|++|+.||.|++||+++++.+..+.+|...+.
T Consensus       116 ~n~lAvgl-d~tV~lWd~~-tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~  193 (420)
T 4gga_A          116 GNVLAVAL-DNSVYLWSAS-SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG  193 (420)
T ss_dssp             TSEEEEEE-TTEEEEEETT-TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred             CCEEEEEe-CCEEEEEECC-CCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE
Confidence            45777774 9999999998 677666665  57778999999985 5689999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      ++.++  +.++++++.|+.+++||.......            +..+.+|...+..+.++|+++++++++.|+.+++|+.
T Consensus       194 ~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~------------~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~  259 (420)
T 4gga_A          194 SLSWN--SYILSSGSRSGHIHHHDVRVAEHH------------VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS  259 (420)
T ss_dssp             EEEEE--TTEEEEEETTSEEEEEETTSSSCE------------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred             EEeeC--CCEEEEEeCCCceeEeeeccccee------------eEEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence            88775  579999999999999998765432            2346789999999999999999999999999999998


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCC-cEEEE--ecCCCeEEEEECCccc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVA--ANSQGIIKIYVIPIRV  220 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~--~~~dg~i~iw~~~~~~  220 (221)
                      .+++....           .......|...|.+++|+|++ .++++  |+.|+.|++||+.+++
T Consensus       260 ~~~~~~~~-----------~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~  312 (420)
T 4gga_A          260 APGEGGWV-----------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA  312 (420)
T ss_dssp             SCCSSCSC-----------CSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE
T ss_pred             ccccccce-----------eeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc
Confidence            77653211           112234678889999999965 45554  4579999999998865

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.3e-30  Score=197.74  Aligned_cols=177  Identities=12%  Similarity=0.115  Sum_probs=138.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      |||+++|+++.|++|+  |.. ..+   .+.+|...|.+++|+|++      .++.+.+|+.+.. ....+ .|...|.+
T Consensus        25 pDG~~iASas~D~TV~--d~~-~~~---~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~-~~~~~-~~~~~V~~   90 (588)
T 2j04_A           25 RDGTLYLTTFPDISIG--QPK-YAK---DINCNSKNLFHVKEFPLE------FENKLDFELAQQN-GLLNS-QPVCYPRV   90 (588)
T ss_dssp             TTSCEEEECSSSEEEE--EEC-CCS---CCSSBGGGTEEEEEECCC------CCCTTTTSCCCSS-CSSTT-SCSCCEEE
T ss_pred             CCCCEEEEEcCCceee--ccc-ccc---eecCCCccEEEEEECCCC------CcceEEEEeCCCc-eEeec-CCCCcEEE
Confidence            7999999999999999  754 333   336899999999999977      5666666654322 23333 45788999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC-----ceEEEEEecCCCEEEEecCCCeEE
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN-----DKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      ++|+|+|.++|+++.||.|++||...  .+.             .+. |..     .+.+++|+|+|++|++|+.||.|+
T Consensus        91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~-------------~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk  154 (588)
T 2j04_A           91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLT-------------NLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ  154 (588)
T ss_dssp             EEECSSSSCEEEEETTSCEEEEETTE--EEE-------------ECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred             EEECCCCCEEEEEeCCCcEEEEeCCc--eee-------------ecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence            99999999999999999999999543  222             223 443     499999999999999999999999


Q ss_pred             EEEcCCCCc-------eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKH-------MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +||+..+..       +..+.           ....+|..+|.+++|+|+|  +++++.|+.|++|++.+++
T Consensus       155 IWd~~~~~l~~~~~i~l~ti~-----------~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~  213 (588)
T 2j04_A          155 FFSIRKNSENTPEFYFESSIR-----------LSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS  213 (588)
T ss_dssp             EEECCCCTTTCCCCEEEEEEE-----------CSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred             EEECCCCccccccceeeeeee-----------cccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence            999987643       12221           0113678899999999999  7888889999999998764

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.97  E-value=2e-29  Score=184.52  Aligned_cols=175  Identities=13%  Similarity=0.123  Sum_probs=148.0

Q ss_pred             CceEEEEeCCCeEEEEEecCC---------ceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-Ccc--cee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNT---------KEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-PNC--LRS   70 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-~~~--~~~   70 (221)
                      +++|++++.|+.|++||+. .         .+++..+. |...|.+++|+|+. +++++.|+.|++||+++ +..  ...
T Consensus       112 ~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~  188 (342)
T 1yfq_A          112 DDKLIAASWDGLIEVIDPR-NYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIE  188 (342)
T ss_dssp             TTEEEEEETTSEEEEECHH-HHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEE
T ss_pred             CCEEEEEcCCCeEEEEccc-ccccccccccCCeeeEEe-eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceee
Confidence            6789999999999999998 4         55555666 88999999999877 99999999999999988 543  223


Q ss_pred             eeccccceeEEEEeC-CCCEEEEecCCCeEEEEECCCC------eeeEEEEeecccceeEeeEEEe---------eCceE
Q psy10662         71 FVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLS------KHMHAYRFDTVRSMLESSFVGH---------INDKN  134 (221)
Q Consensus        71 ~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~v~  134 (221)
                      ...|...+.+++|+| +++++++++.||.|++|+++..      +....             +..|         ...|.
T Consensus       189 ~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~  255 (342)
T 1yfq_A          189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA-------------FRCHRLNLKDTNLAYPVN  255 (342)
T ss_dssp             ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE-------------EECCCCCTTCCSSCCCEE
T ss_pred             ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee-------------eecccccccccccceeEE
Confidence            456788999999999 9999999999999999999876      44433             3444         34899


Q ss_pred             EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccc-ccceeEEEEcCCCcEEEEecCCCe
Q psy10662        135 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT-NEFVSAVCWRQLSRVLVAANSQGI  210 (221)
Q Consensus       135 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~  210 (221)
                      +++|+|++++|++++.||.|++||+.+++.+..+.               .| ...|.+++  |++++|++++.||.
T Consensus       256 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---------------~~h~~~v~~~~--~~~~~l~s~s~Dg~  315 (342)
T 1yfq_A          256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA---------------KFNEDSVVKIA--CSDNILCLATSDDT  315 (342)
T ss_dssp             EEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC---------------CCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred             EEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh---------------cccCCCceEec--CCCCeEEEEecCCc
Confidence            99999999999999999999999998887655442               56 88899999  99999999999998

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=1.3e-28  Score=183.95  Aligned_cols=203  Identities=13%  Similarity=0.068  Sum_probs=142.7

Q ss_pred             ceEEEEeCCCeEEEEEecCCc---------eeeEEEEeccCceEEEEEec---------------------CCcEEEecC
Q psy10662          4 CHLAFGSADHCVHYYDLRNTK---------EALAVFKGHRKAVSYVKFLN---------------------KEDIVSAST   53 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~---------~~~~~~~~~~~~i~~~~~~~---------------------~~~l~s~~~   53 (221)
                      ..|++++.++.|.+|+.....         ..+..+ .+..++..+.|++                     ...+++++.
T Consensus        31 ~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~  109 (393)
T 4gq1_A           31 SNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTI-QTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQ  109 (393)
T ss_dssp             TTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEE-ECSSCEEEEEECTTCEEECC----------CCEEEEEEEEEET
T ss_pred             CCEEEEECCCCEEEEECCCCCcccccccceeeeEEE-ecCCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEeC
Confidence            344555568889999875221         112222 2445555555542                     234889999


Q ss_pred             CCcEEEEEcCCCccc-----eeeeccccceeEEEEeC--------CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccc
Q psy10662         54 DSQLKLWNINKPNCL-----RSFVGHINDKNFVGLAT--------DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS  120 (221)
Q Consensus        54 d~~v~~wd~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  120 (221)
                      |++|++||+++++..     ..+.+|.+.|++++|+|        ++++|++++.|++|+|||++++.++..        
T Consensus       110 d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~--------  181 (393)
T 4gq1_A          110 DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA--------  181 (393)
T ss_dssp             TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE--------
T ss_pred             CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee--------
Confidence            999999999887543     34578999999999998        788999999999999999987766544        


Q ss_pred             eeEeeEEEeeCceEEEEEecCCC-EEEEecCCCeEEEEEcCCCCceeeeeeec----------ccccccccccccccccc
Q psy10662        121 MLESSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDT----------VRSMLERDRNEDDTNEF  189 (221)
Q Consensus       121 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~  189 (221)
                           +..|...+.+++|+|++. +|++++.|+.|++||+++++.........          ............+|...
T Consensus       182 -----~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  256 (393)
T 4gq1_A          182 -----GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS  256 (393)
T ss_dssp             -----EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred             -----ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence                 367889999999999874 89999999999999998876544332111          01111112223467888


Q ss_pred             eeEEEEc-CCCcEEEEecCCCeEEEEECCccc
Q psy10662        190 VSAVCWR-QLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       190 v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +.++.|+ |+++.|++++.|+.+++||+.+++
T Consensus       257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~  288 (393)
T 4gq1_A          257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANN  288 (393)
T ss_dssp             CSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred             ceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence            9999987 799999999999999999997654

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.97  E-value=5.4e-27  Score=174.76  Aligned_cols=200  Identities=10%  Similarity=0.063  Sum_probs=156.2

Q ss_pred             CCCceE-EEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHL-AFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |++++| ++++.|+.|++||+. +++.+..+..+. .+.+++|+|++. + ++++.++.|++||+.+++.+..+.. ...
T Consensus        41 ~dg~~l~~~~~~d~~i~v~d~~-~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~  117 (391)
T 1l0q_A           41 PDGTKVYVANAHSNDVSIIDTA-TNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKS  117 (391)
T ss_dssp             TTSSEEEEEEGGGTEEEEEETT-TTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSS
T ss_pred             CCCCEEEEECCCCCeEEEEECC-CCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCC
Confidence            577766 677799999999998 778888887554 899999998554 5 4556789999999999988877764 456


Q ss_pred             eeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEE-----------------------------eecccceeEeeEE
Q psy10662         78 KNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRSMLESSFV  127 (221)
Q Consensus        78 v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~  127 (221)
                      +.+++|+|+++++ ++++.++.|++||+.+++.+..+.                             |+.........+ 
T Consensus       118 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-  196 (391)
T 1l0q_A          118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV-  196 (391)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-
T ss_pred             cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE-
Confidence            8999999999977 788889999999999888766554                             222222222222 


Q ss_pred             EeeCceEEEEEecCCCEEEEec---CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-E
Q psy10662        128 GHINDKNFVGLATDGDYVACGS---ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-V  203 (221)
Q Consensus       128 ~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~  203 (221)
                      .+...+.+++|+|+++++++++   .++.|++||+.+++.+..+.               .+ ..+.+++|+|++++| +
T Consensus       197 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~---------------~~-~~~~~~~~s~dg~~l~~  260 (391)
T 1l0q_A          197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP---------------VG-PDPAGIAVTPDGKKVYV  260 (391)
T ss_dssp             ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE---------------CC-SSEEEEEECTTSSEEEE
T ss_pred             ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe---------------cC-CCccEEEEccCCCEEEE
Confidence            3455788999999999998888   68999999998887655543               22 246889999999877 6


Q ss_pred             EecCCCeEEEEECCccc
Q psy10662        204 AANSQGIIKIYVIPIRV  220 (221)
Q Consensus       204 ~~~~dg~i~iw~~~~~~  220 (221)
                      +++.|+.|++||+.+++
T Consensus       261 s~~~d~~v~v~d~~~~~  277 (391)
T 1l0q_A          261 ALSFXNTVSVIDTATNT  277 (391)
T ss_dssp             EETTTTEEEEEETTTTE
T ss_pred             EcCCCCEEEEEECCCCc
Confidence            67889999999998765

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.97  E-value=2.1e-27  Score=177.04  Aligned_cols=185  Identities=9%  Similarity=0.040  Sum_probs=151.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      +.++++++.|+.|++||+. +++.+..+..|. .+.+++|+|++. + ++++.|+.|++||+.+++.+..+..+. .+.+
T Consensus         2 ~~l~vs~~~d~~v~v~d~~-~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~   78 (391)
T 1l0q_A            2 TFAYIANSESDNISVIDVT-SNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQG   78 (391)
T ss_dssp             EEEEEEETTTTEEEEEETT-TTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEE
T ss_pred             CEEEEEcCCCCEEEEEECC-CCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccc
Confidence            4678899999999999998 778888888664 589999998654 4 677799999999999999888876544 8999


Q ss_pred             EEEeCCCCEEE-EecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EEecCCCeEEEEE
Q psy10662         81 VGLATDGDYVA-CGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYY  158 (221)
Q Consensus        81 ~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d  158 (221)
                      ++|+|++++++ +++.++.|++||+.+++.+..+              .+...+.+++|+|+++.+ ++++.++.|++||
T Consensus        79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~--------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d  144 (391)
T 1l0q_A           79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV--------------KTGKSPLGLALSPDGKKLYVTNNGDKTVSVIN  144 (391)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE--------------ECSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE--------------eCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence            99999999775 5557799999999998876553              234568899999999977 6888899999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~  220 (221)
                      +.+++....+.                ....+..++|+|++++| ++++.|+.|++||+.+++
T Consensus       145 ~~~~~~~~~~~----------------~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~  191 (391)
T 1l0q_A          145 TVTKAVINTVS----------------VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS  191 (391)
T ss_dssp             TTTTEEEEEEE----------------CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred             CCCCcEEEEEe----------------cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence            98887665543                12346899999999887 577789999999998764

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.96  E-value=5.5e-27  Score=176.94  Aligned_cols=199  Identities=15%  Similarity=0.124  Sum_probs=158.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cE-EEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DI-VSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      |++.++++++.|+.|++||+. +++.+..+..|...+.+++|+|++ .+ ++++.|+.|++||+++++.+..+.. ...+
T Consensus       179 ~~~~~~~s~~~d~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~  256 (433)
T 3bws_A          179 EHNELWVSQMQANAVHVFDLK-TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLP  256 (433)
T ss_dssp             GGTEEEEEEGGGTEEEEEETT-TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEE
T ss_pred             CCCEEEEEECCCCEEEEEECC-CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCc
Confidence            468899999999999999998 677788888899999999999855 45 4566899999999999888777754 4458


Q ss_pred             eEEEEeCCCCEEEEec--------CCCeEEEEECCCCeeeEEEE-----------------------------eecccce
Q psy10662         79 NFVGLATDGDYVACGS--------ENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRSM  121 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~--------~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~  121 (221)
                      .+++|+|+++++++++        .|+.|++||+.+++.+..+.                             |+.....
T Consensus       257 ~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~  336 (433)
T 3bws_A          257 RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK  336 (433)
T ss_dssp             EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred             eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence            9999999999988887        58899999999887665442                             2223333


Q ss_pred             eEeeEEEeeCceEEEEEecCCCEEEEecC---------------CCeEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662        122 LESSFVGHINDKNFVGLATDGDYVACGSE---------------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT  186 (221)
Q Consensus       122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (221)
                      ....+ .+...+.+++|+|+++++++++.               ||.|++||+.+++.+..+.                .
T Consensus       337 ~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~----------------~  399 (433)
T 3bws_A          337 VQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE----------------A  399 (433)
T ss_dssp             EEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE----------------C
T ss_pred             EEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec----------------C
Confidence            33333 35667889999999998888776               5799999998887665553                2


Q ss_pred             ccceeEEEEcCCCcEEEEecC-CCeEEEEECCc
Q psy10662        187 NEFVSAVCWRQLSRVLVAANS-QGIIKIYVIPI  218 (221)
Q Consensus       187 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~  218 (221)
                      ...+.+++|+|+|++|++++. |+.|++|++..
T Consensus       400 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          400 GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred             CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence            345889999999999988764 99999999863

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.96  E-value=1.4e-27  Score=180.22  Aligned_cols=189  Identities=11%  Similarity=0.034  Sum_probs=154.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeE-----EEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALA-----VFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~   74 (221)
                      |++.++++++.++.|++||+. +++...     .+.+|...|.+++|+|++ .+++++.|+.|++||+++++.+..+..|
T Consensus       132 ~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~  210 (433)
T 3bws_A          132 DNTRLAIPLLEDEGMDVLDIN-SGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLT  210 (433)
T ss_dssp             SSSEEEEEBTTSSSEEEEETT-TCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS
T ss_pred             CCCeEEEEeCCCCeEEEEECC-CCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCC
Confidence            467788888889999999998 566555     334678899999998754 5788899999999999999988888888


Q ss_pred             ccceeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec----
Q psy10662         75 INDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS----  149 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----  149 (221)
                      ...+.+++|+|+++++ ++++.++.|++||+++++.+..+             . ....+.+++|+|+++++++++    
T Consensus       211 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~-------------~-~~~~~~~~~~~~~g~~l~~~~~~~~  276 (433)
T 3bws_A          211 GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT-------------D-KIGLPRGLLLSKDGKELYIAQFSAS  276 (433)
T ss_dssp             SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC-------------C-CCSEEEEEEECTTSSEEEEEEEESC
T ss_pred             CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe-------------c-CCCCceEEEEcCCCCEEEEEECCCC
Confidence            8899999999999987 45558999999999988776543             1 234588999999999999888    


Q ss_pred             ----CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EEecCCCeEEEEECCccc
Q psy10662        150 ----ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       150 ----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~  220 (221)
                          .|+.|++||+.+++....+                .+...+..++|+|+++.+ ++++.|+.|++||+.+++
T Consensus       277 ~~~~~dg~i~~~d~~~~~~~~~~----------------~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~  336 (433)
T 3bws_A          277 NQESGGGRLGIYSMDKEKLIDTI----------------GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK  336 (433)
T ss_dssp             TTCSCCEEEEEEETTTTEEEEEE----------------EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred             ccccCCCeEEEEECCCCcEEeec----------------cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence                5889999999887655443                234467899999999755 666889999999998764

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.96  E-value=8.4e-27  Score=167.15  Aligned_cols=192  Identities=8%  Similarity=0.009  Sum_probs=136.5

Q ss_pred             eEEEEeCCCeEEEEEecCCc---eeeEEEEeccCc-------------------------eEEEEEecC----Cc-EEEe
Q psy10662          5 HLAFGSADHCVHYYDLRNTK---EALAVFKGHRKA-------------------------VSYVKFLNK----ED-IVSA   51 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~-------------------------i~~~~~~~~----~~-l~s~   51 (221)
                      .+++++ ...|++|+.. ..   +.+++++.|+.+                         |.+++|+|+    +. ++++
T Consensus        56 ~~~~~~-~~~v~lw~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~  133 (356)
T 2w18_A           56 CIITAC-EDVVSLWKAL-DAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKS  133 (356)
T ss_dssp             EEEEEE-SSEEEEEEES-SSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEE
T ss_pred             EEEEec-cceEEEcccC-CCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeC
Confidence            455665 4589999998 45   778888877754                         445555554    22 4443


Q ss_pred             c--------------------CCCcEEEEEcC-CCccceeeeccccceeEEEEeC---CCCEEEEecCCCeEEEEECCCC
Q psy10662         52 S--------------------TDSQLKLWNIN-KPNCLRSFVGHINDKNFVGLAT---DGDYVACGSENNSLYIYYKGLS  107 (221)
Q Consensus        52 ~--------------------~d~~v~~wd~~-~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~  107 (221)
                      +                    .|+.|++|++. +++.+..+..|...+..++|+|   ++.+|++++.|++|+|||+.++
T Consensus       134 g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG  213 (356)
T 2w18_A          134 GNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG  213 (356)
T ss_dssp             EEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC
T ss_pred             CCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCC
Confidence            3                    38889999984 4777777788888899999998   6789999999999999999999


Q ss_pred             eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE------------EEecCCCeEEEEEcCCCCceeeeeeecccc
Q psy10662        108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV------------ACGSENNSLYIYYKGLSKHMHAYRFDTVRS  175 (221)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l------------~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~  175 (221)
                      +.++++.-          -..+...+.+++|+|+|+++            ++|+.|++|++||..+++.+..+.+..   
T Consensus       214 k~l~tL~g----------~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~---  280 (356)
T 2w18_A          214 QLLKKMHI----------DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL---  280 (356)
T ss_dssp             CEEEEEEC----------CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC---
T ss_pred             cEEEEEcC----------CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec---
Confidence            98887610          01123467788999999876            567889999999999887765443211   


Q ss_pred             cccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        176 MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                             ..+|...+.+.++  ++.++++++.|++|++||+.+++
T Consensus       281 -------p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk  316 (356)
T 2w18_A          281 -------PPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQ  316 (356)
T ss_dssp             -------CTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCS
T ss_pred             -------cCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCc
Confidence                   1244444444444  48899999999999999999876

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.95  E-value=1.3e-25  Score=162.66  Aligned_cols=172  Identities=16%  Similarity=0.222  Sum_probs=136.4

Q ss_pred             eEEEEEecCCcEEEecCCCcEEEEEcCCCccceeee--ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662         37 VSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV--GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        37 i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  114 (221)
                      ..+|+|++++.|++ +.|++|++||+.+++.+..+.  +|...|.+++|+|+++++++|+.|+.|++||+++++.+..+.
T Consensus        28 ~~~l~WS~~~~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~  106 (318)
T 4ggc_A           28 LNLVDWSSGNVLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT  106 (318)
T ss_dssp             CBCEEECTTSEEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             ceEEEECCCCEEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence            57899998875555 569999999999999887664  567789999999999999999999999999999999887765


Q ss_pred             ee----------------------------cccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCcee
Q psy10662        115 FD----------------------------TVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH  166 (221)
Q Consensus       115 ~~----------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~  166 (221)
                      ..                            .........+.+|...+..+.++++++++++++.|+.|++||+++++...
T Consensus       107 ~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~  186 (318)
T 4ggc_A          107 SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW  186 (318)
T ss_dssp             CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBS
T ss_pred             CccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccc
Confidence            11                            11223445667888999999999999999999999999999998765432


Q ss_pred             eeeeecccccccccccccccccceeEEEEcCCCcEE---EEecCCCeEEEEECCccc
Q psy10662        167 AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL---VAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~dg~i~iw~~~~~~  220 (221)
                      ..           ......+...|..++++|++..+   ++++.++.|++|+.....
T Consensus       187 ~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~  232 (318)
T 4ggc_A          187 VP-----------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA  232 (318)
T ss_dssp             CC-----------SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC
T ss_pred             cc-----------eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc
Confidence            21           11223567789999999976533   466789999999987653

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.95  E-value=5.6e-26  Score=171.42  Aligned_cols=195  Identities=11%  Similarity=0.075  Sum_probs=143.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCC----------ce-----eeEEEEeccCceEEEEEecC-CcEE----EecCCCcEEEE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNT----------KE-----ALAVFKGHRKAVSYVKFLNK-EDIV----SASTDSQLKLW   60 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~----------~~-----~~~~~~~~~~~i~~~~~~~~-~~l~----s~~~d~~v~~w   60 (221)
                      +++.++++++.++ +++|+....          ..     ....+ .+...|.+++|+|+ ..|+    +++.|+.|++|
T Consensus        46 ~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iw  123 (434)
T 2oit_A           46 NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFF  123 (434)
T ss_dssp             TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEE
T ss_pred             cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEE
Confidence            3567888888887 888876411          00     01112 25678999999985 4577    78889999999


Q ss_pred             EcCCC--------cc---ceeeeccccceeEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEE
Q psy10662         61 NINKP--------NC---LRSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG  128 (221)
Q Consensus        61 d~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  128 (221)
                      |+++.        +.   +..+.+|...|.+++|+|+ +.++++++.||.|++||+++++.+..             ..+
T Consensus       124 d~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~-------------~~~  190 (434)
T 2oit_A          124 DVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCA-------------TLP  190 (434)
T ss_dssp             EHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEE-------------EEC
T ss_pred             EccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceee-------------ccC
Confidence            98765        22   3445678999999999998 78999999999999999988754432             245


Q ss_pred             eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-C
Q psy10662        129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-S  207 (221)
Q Consensus       129 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~  207 (221)
                      |...+.+++|+|+|++|++|+.||.|++||.+ ++....+....        .....|...|.+++|++++.++++.+ .
T Consensus       191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~--------~~~~~~~~~v~~v~w~~~~~~l~~~~~~  261 (434)
T 2oit_A          191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPP--------FYESDHPVRVLDVLWIGTYVFAIVYAAA  261 (434)
T ss_dssp             GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCT--------TCCTTSCEEEEEEEEEETTEEEEEEEET
T ss_pred             CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCc--------ccCCCCceeEEEEEEecCceEEEEEccC
Confidence            77899999999999999999999999999987 44333322100        00113455899999999988886543 4


Q ss_pred             CC------eEEEEECCcc
Q psy10662        208 QG------IIKIYVIPIR  219 (221)
Q Consensus       208 dg------~i~iw~~~~~  219 (221)
                      ||      .+++|+++..
T Consensus       262 dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          262 DGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             TCCSSSCCEEEEEECCCT
T ss_pred             CCccCCCCceEEEEeccC
Confidence            43      3899999754

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.94  E-value=7.2e-25  Score=164.68  Aligned_cols=185  Identities=10%  Similarity=0.022  Sum_probs=143.2

Q ss_pred             CceEEEEeCC------CeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCC---cEEEEEcCCCccceeee
Q psy10662          3 SCHLAFGSAD------HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDS---QLKLWNINKPNCLRSFV   72 (221)
Q Consensus         3 ~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~---~v~~wd~~~~~~~~~~~   72 (221)
                      +..++.++.+      +.|++||+. . .....+..|...+.+++|+|++ .|++++.++   .|++||+++++.. .+.
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~  219 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYD-G-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA  219 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETT-S-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred             CCEEEEEEecCCCCccceEEEEcCC-C-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence            5566666654      799999997 3 4467778899999999999865 588888775   9999999988765 456


Q ss_pred             ccccceeEEEEeCCCCEEE-EecCCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662         73 GHINDKNFVGLATDGDYVA-CGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~-~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                      .|...+.+++|+|+|++|+ +++.++  .|.+||+.+++..              .+..+...+.+++|+|+|++|+.++
T Consensus       220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~--------------~l~~~~~~~~~~~~spdg~~l~~~s  285 (415)
T 2hqs_A          220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR--------------QVTDGRSNNTEPTWFPDSQNLAFTS  285 (415)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--------------ECCCCSSCEEEEEECTTSSEEEEEE
T ss_pred             cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE--------------eCcCCCCcccceEECCCCCEEEEEE
Confidence            6788899999999999877 666555  4999999877642              2345667889999999999988877


Q ss_pred             C-CC--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC---CeEEEEECCccc
Q psy10662        150 E-NN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ---GIIKIYVIPIRV  220 (221)
Q Consensus       150 ~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~  220 (221)
                      . ++  .|++||+.+++... +               ..+...+..++|+|+|++|++++.+   ..|++||+.+++
T Consensus       286 ~~~g~~~i~~~d~~~~~~~~-l---------------~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~  346 (415)
T 2hqs_A          286 DQAGRPQVYKVNINGGAPQR-I---------------TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG  346 (415)
T ss_dssp             CTTSSCEEEEEETTSSCCEE-C---------------CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred             CCCCCcEEEEEECCCCCEEE-E---------------ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence            6 44  67777887664321 1               1244568899999999999988764   689999998765

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.94  E-value=1.8e-24  Score=162.58  Aligned_cols=186  Identities=11%  Similarity=0.083  Sum_probs=144.4

Q ss_pred             CCCceEEEEeCCC---eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EE-EecCCCc--EEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSADH---CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IV-SASTDSQ--LKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg---~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~-s~~~d~~--v~~wd~~~~~~~~~~~~   73 (221)
                      |||+.|++++.++   .|++||+. +++.. .+..|...+.+++|+|++. |+ +++.++.  |++||+.+++. ..+..
T Consensus       188 pdg~~la~~s~~~~~~~i~~~d~~-tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~  264 (415)
T 2hqs_A          188 PDGSKLAYVTFESGRSALVIQTLA-NGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTD  264 (415)
T ss_dssp             TTSSEEEEEECTTSSCEEEEEETT-TCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCC
T ss_pred             CCCCEEEEEEecCCCcEEEEEECC-CCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcC
Confidence            7899999999885   99999998 55543 5667888999999998665 55 6666655  99999988765 45667


Q ss_pred             cccceeEEEEeCCCCEEEEecC-CC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         74 HINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      |...+.+++|+|+|++|++++. ++  .|.+||+.+++...              +..+...+..++|+|+|++|+.++.
T Consensus       265 ~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~--------------l~~~~~~~~~~~~spdG~~l~~~~~  330 (415)
T 2hqs_A          265 GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR--------------ITWEGSQNQDADVSSDGKFMVMVSS  330 (415)
T ss_dssp             CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE--------------CCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred             CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE--------------EecCCCcccCeEECCCCCEEEEEEC
Confidence            8888999999999998887775 44  67788887765321              2334557788999999999988876


Q ss_pred             C---CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC---eEEEEECCccc
Q psy10662        151 N---NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG---IIKIYVIPIRV  220 (221)
Q Consensus       151 d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~  220 (221)
                      +   ..|++||+.+++... +               ..+. .+.+++|+|+|++|++++.++   .|++|++.++.
T Consensus       331 ~~g~~~i~~~d~~~~~~~~-l---------------~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~  389 (415)
T 2hqs_A          331 NGGQQHIAKQDLATGGVQV-L---------------SSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF  389 (415)
T ss_dssp             CSSCEEEEEEETTTCCEEE-C---------------CCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred             cCCceEEEEEECCCCCEEE-e---------------cCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence            4   589999998765421 1               1232 688999999999999988776   89999987653

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.93  E-value=3.4e-23  Score=160.23  Aligned_cols=201  Identities=9%  Similarity=0.079  Sum_probs=152.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEc--CCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNI--NKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~--~~~~~~~~~~~~~~~   77 (221)
                      |++.++++++.|+.|.+||.. +++++.++..+.. +..++|+|+ ++|++++.|+.|++||+  .+++.+..+. +...
T Consensus       147 p~~~~~vs~~~d~~V~v~D~~-t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~  223 (543)
T 1nir_A          147 LPNLFSVTLRDAGQIALVDGD-SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIE  223 (543)
T ss_dssp             GGGEEEEEEGGGTEEEEEETT-TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSE
T ss_pred             CCCEEEEEEcCCCeEEEEECC-CceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCC
Confidence            467889999999999999998 7888888884333 899999985 56889999999999999  7888888776 4456


Q ss_pred             eeEEEEeC----CCCEEEEecC-CCeEEEEECCCCeeeEEEEeecccceeEeeEEEee-CceEEEEEecCCC-EEEEecC
Q psy10662         78 KNFVGLAT----DGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHI-NDKNFVGLATDGD-YVACGSE  150 (221)
Q Consensus        78 v~~~~~~~----~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~-~l~~~~~  150 (221)
                      +..++|+|    +|+++++++. ++.|.+||..+++++..+......   ......|. ..+..+.++|++. ++++...
T Consensus       224 p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~---~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~  300 (543)
T 1nir_A          224 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT---VDTQTYHPEPRVAAIIASHEHPEFIVNVKE  300 (543)
T ss_dssp             EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC---SSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred             cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc---cCccccccCCceEEEEECCCCCEEEEEECC
Confidence            79999999    9999988874 899999999999988776311000   00000122 3688999999765 5667778


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCcccC
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPIRVL  221 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~l  221 (221)
                      ++.|.+||+.+.+.+.....              .+...+..+.|+|+|++|+++ ..++.|.+||+.++++
T Consensus       301 ~g~i~vvd~~~~~~l~~~~i--------------~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l  358 (543)
T 1nir_A          301 TGKVLLVNYKDIDNLTVTSI--------------GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL  358 (543)
T ss_dssp             TTEEEEEECTTSSSCEEEEE--------------ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred             CCeEEEEEecCCCcceeEEe--------------ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE
Confidence            89999999987664431111              123456789999999987655 4689999999998763

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.92  E-value=5.8e-22  Score=144.51  Aligned_cols=198  Identities=9%  Similarity=-0.041  Sum_probs=146.4

Q ss_pred             CCCceE-EEEeCCCeEEEEEecCCceeeEEEEe-c----cCceEEEEEecCC-cEEEec------------CCCcEEEEE
Q psy10662          1 MNSCHL-AFGSADHCVHYYDLRNTKEALAVFKG-H----RKAVSYVKFLNKE-DIVSAS------------TDSQLKLWN   61 (221)
Q Consensus         1 ~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~-~----~~~i~~~~~~~~~-~l~s~~------------~d~~v~~wd   61 (221)
                      ||++.+ +++..++.|.+||+. +++.+..+.. +    ...+..++|+|++ .++++.            .++.|.+||
T Consensus        43 ~dg~~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d  121 (337)
T 1pby_B           43 PGGRIAYATVNKSESLVKIDLV-TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD  121 (337)
T ss_dssp             TTSSEEEEEETTTTEEEEEETT-TCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred             CCCCEEEEEeCCCCeEEEEECC-CCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEE
Confidence            577655 556667899999997 6666666653 1    2267789999865 566664            579999999


Q ss_pred             cCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeec------------------------
Q psy10662         62 INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDT------------------------  117 (221)
Q Consensus        62 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~------------------------  117 (221)
                      +.+++.+..+.. ...+.+++|+|++++++++  ++.|.+||+.+++....+....                        
T Consensus       122 ~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~  198 (337)
T 1pby_B          122 AETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVM  198 (337)
T ss_dssp             TTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEE
T ss_pred             CCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCce
Confidence            998887776653 4567889999999988777  5789999999888776553211                        


Q ss_pred             ----------------------------cccee-EeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeee
Q psy10662        118 ----------------------------VRSML-ESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY  168 (221)
Q Consensus       118 ----------------------------~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~  168 (221)
                                                  ..... ...+..+...+..++|+|++++++++  ++.|.+||+.+++.+..+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~  276 (337)
T 1pby_B          199 ATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV  276 (337)
T ss_dssp             EEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE
T ss_pred             eeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCccee
Confidence                                        11100 11122334456789999999999888  789999999887765544


Q ss_pred             eeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        169 RFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .                ....+.+++|+|+|++|++++.++.|.+||+.+++
T Consensus       277 ~----------------~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~  312 (337)
T 1pby_B          277 P----------------LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE  312 (337)
T ss_dssp             E----------------CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred             c----------------CCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence            3                12346789999999999999999999999998765

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.91  E-value=1.2e-21  Score=142.78  Aligned_cols=191  Identities=8%  Similarity=-0.019  Sum_probs=140.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecC-CCcEEEEEcCCCcc-ceeeecccccee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAST-DSQLKLWNINKPNC-LRSFVGHINDKN   79 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~-d~~v~~wd~~~~~~-~~~~~~~~~~v~   79 (221)
                      +..+++++.++.|.+||+. +++....+..+...+ .++|+|++. +++++. ++.|.+||+.+++. ...+..+..+..
T Consensus        10 ~~~~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~   87 (331)
T 3u4y_A           10 NFGIVVEQHLRRISFFSTD-TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA   87 (331)
T ss_dssp             CEEEEEEGGGTEEEEEETT-TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred             CEEEEEecCCCeEEEEeCc-ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence            4457888889999999998 677777777666667 999998654 555544 89999999999887 666666666665


Q ss_pred             EEEEeCCCCEEEEecCCC---eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCe-E
Q psy10662         80 FVGLATDGDYVACGSENN---SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNS-L  154 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i  154 (221)
                      +++|+|++++++++..++   .|.+||+.+++.+..+              .....+..++|+|+|++++++ ..++. |
T Consensus        88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~--------------~~~~~~~~~~~spdg~~l~~~~~~~~~~i  153 (331)
T 3u4y_A           88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI--------------PIPYDAVGIAISPNGNGLILIDRSSANTV  153 (331)
T ss_dssp             CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE--------------ECCTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred             ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEE--------------ECCCCccceEECCCCCEEEEEecCCCceE
Confidence            599999999988665553   8999999988876553              223456899999999865554 55578 9


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE-ecCCCeEEEEECCccc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA-ANSQGIIKIYVIPIRV  220 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iw~~~~~~  220 (221)
                      .+|++.....+......    .   .    .....+..++|+|+|++|+. +..++.|.+||+.+++
T Consensus       154 ~~~~~~~~g~~~~~~~~----~---~----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~  209 (331)
T 3u4y_A          154 RRFKIDADGVLFDTGQE----F---I----SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE  209 (331)
T ss_dssp             EEEEECTTCCEEEEEEE----E---E----CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred             EEEEECCCCcEeecCCc----c---c----cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence            99998865433222100    0   0    12334688999999996655 4568999999998765

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.91  E-value=1.9e-22  Score=152.22  Aligned_cols=156  Identities=10%  Similarity=0.068  Sum_probs=118.5

Q ss_pred             CCCceEE----EEeCCCeEEEEEecCC-----c--ee---eEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCC
Q psy10662          1 MNSCHLA----FGSADHCVHYYDLRNT-----K--EA---LAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~----~~~~dg~i~i~~~~~~-----~--~~---~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~   64 (221)
                      |++++|+    +|+.|+.|+|||+.+.     .  ++   +..+.+|...|.+++|+|+  ..|++++.||+|++||+++
T Consensus       102 pdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~  181 (434)
T 2oit_A          102 CDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE  181 (434)
T ss_dssp             TTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS
T ss_pred             CCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC
Confidence            6788999    7889999999998732     0  22   3455679999999999984  4588999999999999999


Q ss_pred             CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662         65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY  144 (221)
Q Consensus        65 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  144 (221)
                      +..+....+|...|.+++|+|+|++|++|+.||.|++||++ ++....+......      ...|...+.+++|++++.+
T Consensus       182 ~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~------~~~~~~~v~~v~w~~~~~~  254 (434)
T 2oit_A          182 TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY------ESDHPVRVLDVLWIGTYVF  254 (434)
T ss_dssp             SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC------CTTSCEEEEEEEEEETTEE
T ss_pred             CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCccc------CCCCceeEEEEEEecCceE
Confidence            87766667788999999999999999999999999999998 4444333110000      0012347899999998887


Q ss_pred             EEEec-CCC------eEEEEEcCCCC
Q psy10662        145 VACGS-ENN------SLYIYYKGLSK  163 (221)
Q Consensus       145 l~~~~-~d~------~i~~~d~~~~~  163 (221)
                      +++.+ .+|      .+++|+++..+
T Consensus       255 l~~~~~~dg~~~~~~~v~i~~l~~~~  280 (434)
T 2oit_A          255 AIVYAAADGTLETSPDVVMALLPKKE  280 (434)
T ss_dssp             EEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred             EEEEccCCCccCCCCceEEEEeccCC
Confidence            75433 332      38999998654

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.91  E-value=1.1e-21  Score=144.06  Aligned_cols=194  Identities=10%  Similarity=0.016  Sum_probs=148.9

Q ss_pred             CCCceEEEEeC-------CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc--EEEecCCCcEEEEEcCCCccceee
Q psy10662          1 MNSCHLAFGSA-------DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED--IVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      |+++++++++.       ++.|.+||.. +++.+..+.. ...+..++|+|++.  +++...++.|.+||..+++.+..+
T Consensus        50 ~dg~~l~~~~~~~~~~~~~~~v~~~d~~-~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~  127 (353)
T 3vgz_A           50 QQENALWLATSQSRKLDKGGVVYRLDPV-TLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRL  127 (353)
T ss_dssp             TTTTEEEEEECCCTTTEESEEEEEECTT-TCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             CCCCEEEEEcCCCcCCCCCccEEEEcCC-CCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEE
Confidence            57777777764       5689999998 6777777764 45578899998554  445566899999999999887777


Q ss_pred             ecccc---------ceeEEEEeCCCCEEEEec--CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         72 VGHIN---------DKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        72 ~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                      ..+..         .+.+++|+|+++++++++  .++.|.+||+.+++.+..+             ..+...+..++|+|
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~-------------~~~~~~~~~~~~s~  194 (353)
T 3vgz_A          128 VLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI-------------QNTGKMSTGLALDS  194 (353)
T ss_dssp             ESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE-------------CCCCTTCCCCEEET
T ss_pred             ecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe-------------cCCCCccceEEECC
Confidence            54432         268899999999776665  5789999999988876554             22344577899999


Q ss_pred             CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEECCcc
Q psy10662        141 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVIPIR  219 (221)
Q Consensus       141 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~  219 (221)
                      +++++++++.++.|.+||+.+++....+....           .++...+..++|+|+|++|++++. ++.|.+||+.++
T Consensus       195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~  263 (353)
T 3vgz_A          195 EGKRLYTTNADGELITIDTADNKILSRKKLLD-----------DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG  263 (353)
T ss_dssp             TTTEEEEECTTSEEEEEETTTTEEEEEEECCC-----------SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred             CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCC-----------CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence            99999999999999999999887766554211           123446788999999997777664 599999999876


Q ss_pred             c
Q psy10662        220 V  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus       264 ~  264 (353)
T 3vgz_A          264 N  264 (353)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.91  E-value=2.1e-21  Score=141.48  Aligned_cols=193  Identities=8%  Similarity=0.081  Sum_probs=138.7

Q ss_pred             CCCceEEEEeC-CCeEEEEEecCCcee-eEEEEeccCceEEEEEecCCc-EEEecCCC---cEEEEEcCCCccceeeecc
Q psy10662          1 MNSCHLAFGSA-DHCVHYYDLRNTKEA-LAVFKGHRKAVSYVKFLNKED-IVSASTDS---QLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~-dg~i~i~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~---~v~~wd~~~~~~~~~~~~~   74 (221)
                      ||++++++++. ++.|.+||+. +++. ...+..+..+..+++|+|++. ++++..++   .|.+||+.+++.+..+.. 
T Consensus        49 ~dg~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-  126 (331)
T 3u4y_A           49 SDCSNVVVTSDFCQTLVQIETQ-LEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-  126 (331)
T ss_dssp             SSSCEEEEEESTTCEEEEEECS-SSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-
T ss_pred             CCCCEEEEEeCCCCeEEEEECC-CCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-
Confidence            67886666555 8899999998 5555 667776776666699998655 66444442   899999999988777654 


Q ss_pred             ccceeEEEEeCCCCEEE-EecCCCe-EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE-EecCC
Q psy10662         75 INDKNFVGLATDGDYVA-CGSENNS-LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA-CGSEN  151 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~-~~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d  151 (221)
                      .....+++|+|++++++ +...++. |.+|++.....+....         .........+..++|+|+|++++ ++..+
T Consensus       127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~spdg~~l~v~~~~~  197 (331)
T 3u4y_A          127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG---------QEFISGGTRPFNITFTPDGNFAFVANLIG  197 (331)
T ss_dssp             CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE---------EEEECSSSSEEEEEECTTSSEEEEEETTT
T ss_pred             CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC---------CccccCCCCccceEECCCCCEEEEEeCCC
Confidence            34568999999998654 4455577 9999987644332210         01112334578899999999654 45568


Q ss_pred             CeEEEEEcCCCCc---eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662        152 NSLYIYYKGLSKH---MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       152 ~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~  220 (221)
                      +.|.+||+.+++.   +..+.                ....+..++|+|+|++|+.++ .++.|.+||+.+++
T Consensus       198 ~~v~v~d~~~~~~~~~~~~~~----------------~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~  254 (331)
T 3u4y_A          198 NSIGILETQNPENITLLNAVG----------------TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGT  254 (331)
T ss_dssp             TEEEEEECSSTTSCEEEEEEE----------------CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTE
T ss_pred             CeEEEEECCCCcccceeeecc----------------CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCc
Confidence            9999999988776   43332                224567899999999776655 58899999998765

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.91  E-value=2.5e-21  Score=142.18  Aligned_cols=193  Identities=8%  Similarity=-0.032  Sum_probs=146.4

Q ss_pred             CCCceE-EEEeCCCeEEEEEecCCceeeEEEEeccCc---------eEEEEEecCC-cEEEec--CCCcEEEEEcCCCcc
Q psy10662          1 MNSCHL-AFGSADHCVHYYDLRNTKEALAVFKGHRKA---------VSYVKFLNKE-DIVSAS--TDSQLKLWNINKPNC   67 (221)
Q Consensus         1 ~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~---------i~~~~~~~~~-~l~s~~--~d~~v~~wd~~~~~~   67 (221)
                      ||++++ ++...++.|.+||.. +++.+..+..+...         +.+++|+|++ .+++++  .++.|.+||..+++.
T Consensus        98 ~dg~~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~  176 (353)
T 3vgz_A           98 NTTQTLWFGNTVNSAVTAIDAK-TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL  176 (353)
T ss_dssp             TTTTEEEEEETTTTEEEEEETT-TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE
T ss_pred             CCCCEEEEEecCCCEEEEEeCC-CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce
Confidence            577744 455557999999998 67777777654422         7889999854 455554  588999999999988


Q ss_pred             ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         68 LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                      +..+..+...+..++|+|+++++++++.++.|.+||+.+++....+...         ..++...+..++|+|+++++++
T Consensus       177 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~s~dg~~l~~  247 (353)
T 3vgz_A          177 KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLL---------DDGKEHFFINISLDTARQRAFI  247 (353)
T ss_dssp             EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECC---------CSSSCCCEEEEEEETTTTEEEE
T ss_pred             EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcC---------CCCCCcccceEEECCCCCEEEE
Confidence            8877655566889999999999999999999999999998887665211         0123446778999999997766


Q ss_pred             ecC-CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662        148 GSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       148 ~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~  220 (221)
                      ++. ++.|.+||..+++....+..              +.   ...++|+|+|++++.++ .++.|.+||+.+++
T Consensus       248 ~~~~~~~v~~~d~~~~~~~~~~~~--------------~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~  305 (353)
T 3vgz_A          248 TDSKAAEVLVVDTRNGNILAKVAA--------------PE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK  305 (353)
T ss_dssp             EESSSSEEEEEETTTCCEEEEEEC--------------SS---CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred             EeCCCCEEEEEECCCCcEEEEEEc--------------CC---CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence            665 59999999988877665541              11   14689999999665554 69999999998765

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.91  E-value=1.7e-22  Score=144.61  Aligned_cols=187  Identities=10%  Similarity=0.044  Sum_probs=134.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCC-ceeeEEEEec-cCceEEEEEecCC-cEEEec--CCCcEEEEEc--CCCccceeeec
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNT-KEALAVFKGH-RKAVSYVKFLNKE-DIVSAS--TDSQLKLWNI--NKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~-~~~i~~~~~~~~~-~l~s~~--~d~~v~~wd~--~~~~~~~~~~~   73 (221)
                      ||+++|++++ ++.|++||+. + ++.......+ ...+.+++|+|++ .|++++  .++...+|.+  .+++ ...+..
T Consensus        51 pdg~~l~~~~-~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~  127 (297)
T 2ojh_A           51 PDGKYLLLNS-EGLLYRLSLA-GDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK  127 (297)
T ss_dssp             TTSSEEEEEE-TTEEEEEESS-SCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS
T ss_pred             CCCCEEEEEc-CCeEEEEeCC-CCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec
Confidence            6899999986 7899999998 5 5555555444 3678999999865 477766  3345555554  4444 334433


Q ss_pred             cccceeEEEEeCCCCEEE-EecCCCeEEEEECC--CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-
Q psy10662         74 HINDKNFVGLATDGDYVA-CGSENNSLYIYYKG--LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-  149 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  149 (221)
                      + ..+..++|+|++++++ +++.++.+.+|++.  +++.              ..+..+...+.+++|+|++++|+.++ 
T Consensus       128 ~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~s~dg~~l~~~~~  192 (297)
T 2ojh_A          128 N-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE--------------TRLTHGEGRNDGPDYSPDGRWIYFNSS  192 (297)
T ss_dssp             S-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE--------------EECCCSSSCEEEEEECTTSSEEEEEEC
T ss_pred             C-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc--------------eEcccCCCccccceECCCCCEEEEEec
Confidence            3 3488899999999876 77789999999853  2222              12345567789999999999887665 


Q ss_pred             CCCeEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----------CeEEEEECC
Q psy10662        150 ENNSLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----------GIIKIYVIP  217 (221)
Q Consensus       150 ~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~i~iw~~~  217 (221)
                      .++.+.+|++.. ......+               ..+...+..++|+|+|++|++++.+           +.|.+||+.
T Consensus       193 ~~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~  257 (297)
T 2ojh_A          193 RTGQMQIWRVRVDGSSVERI---------------TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD  257 (297)
T ss_dssp             TTSSCEEEEEETTSSCEEEC---------------CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred             CCCCccEEEECCCCCCcEEE---------------ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence            588999998752 2222211               2455678899999999999988765           579999998


Q ss_pred             ccc
Q psy10662        218 IRV  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus       258 ~~~  260 (297)
T 2ojh_A          258 GGN  260 (297)
T ss_dssp             SCS
T ss_pred             CCC
Confidence            765

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.90  E-value=2.4e-21  Score=141.99  Aligned_cols=201  Identities=8%  Similarity=-0.048  Sum_probs=144.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEecc-CceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeeecc---
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-KAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFVGH---   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~~~---   74 (221)
                      +++.++++++.++.|++||+. +++.+..+..+. ..+..++|+|++. + ++...++.|.+||+.+++.+..+...   
T Consensus         9 ~~~~~~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~   87 (349)
T 1jmx_B            9 AGHEYMIVTNYPNNLHVVDVA-SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP   87 (349)
T ss_dssp             TTCEEEEEEETTTEEEEEETT-TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST
T ss_pred             CCCEEEEEeCCCCeEEEEECC-CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc
Confidence            367889999999999999998 677777776443 2578999998654 4 45667899999999988877666432   


Q ss_pred             ---ccceeEEEEeCCCCEEEEecCC------------CeEEEEECCCCe---eeEEEE----------------------
Q psy10662         75 ---INDKNFVGLATDGDYVACGSEN------------NSLYIYYKGLSK---HMHAYR----------------------  114 (221)
Q Consensus        75 ---~~~v~~~~~~~~~~~l~~~~~d------------~~v~iwd~~~~~---~~~~~~----------------------  114 (221)
                         ...+..++|+|+++++++++.+            +.|.+||+.+++   .+..+.                      
T Consensus        88 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~~  167 (349)
T 1jmx_B           88 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPD  167 (349)
T ss_dssp             TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSS
T ss_pred             ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEccCc
Confidence               2237889999999999888765            899999987632   222211                      


Q ss_pred             ---eecccceeEeeEEEe--------------------------------------------------------------
Q psy10662        115 ---FDTVRSMLESSFVGH--------------------------------------------------------------  129 (221)
Q Consensus       115 ---~~~~~~~~~~~~~~~--------------------------------------------------------------  129 (221)
                         ++.........+...                                                              
T Consensus       168 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (349)
T 1jmx_B          168 IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT  247 (349)
T ss_dssp             EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE
T ss_pred             EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEe
Confidence               111122222211111                                                              


Q ss_pred             ------eCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE
Q psy10662        130 ------INDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL  202 (221)
Q Consensus       130 ------~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  202 (221)
                            ...+..++|+| ++++++++  ++.|.+||+.+++....+.                ....+.+++|+|+|++|
T Consensus       248 ~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~----------------~~~~~~~~~~s~dg~~l  309 (349)
T 1jmx_B          248 QEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN----------------LDHTYYCVAFDKKGDKL  309 (349)
T ss_dssp             EEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE----------------CSSCCCEEEECSSSSCE
T ss_pred             cccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc----------------CCCCccceEECCCCCEE
Confidence                  01344667789 99998888  8899999998877655543                12246789999999999


Q ss_pred             EEecCCCeEEEEECCccc
Q psy10662        203 VAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       203 ~~~~~dg~i~iw~~~~~~  220 (221)
                      ++++.++.|.+||+.+++
T Consensus       310 ~~~~~~~~v~v~d~~~~~  327 (349)
T 1jmx_B          310 YLGGTFNDLAVFNPDTLE  327 (349)
T ss_dssp             EEESBSSEEEEEETTTTE
T ss_pred             EEecCCCeEEEEeccccc
Confidence            988889999999998765

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.90  E-value=4.5e-21  Score=148.42  Aligned_cols=209  Identities=9%  Similarity=-0.002  Sum_probs=140.6

Q ss_pred             CCCceEEEEeCCCeEEEEEe--cCCceeeEEEEeccCceEEEEEec----CCc-EEEec-CCCcEEEEEcCCCccceeee
Q psy10662          1 MNSCHLAFGSADHCVHYYDL--RNTKEALAVFKGHRKAVSYVKFLN----KED-IVSAS-TDSQLKLWNINKPNCLRSFV   72 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~--~~~~~~~~~~~~~~~~i~~~~~~~----~~~-l~s~~-~d~~v~~wd~~~~~~~~~~~   72 (221)
                      |||++|++++.|+.|++||+  . +.+.+..+. +...+..++|+|    ++. +++++ .+++|.+||..+++++..+.
T Consensus       188 pdg~~l~v~~~d~~V~v~D~~~~-t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~  265 (543)
T 1nir_A          188 ASGRYLLVIGRDARIDMIDLWAK-EPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS  265 (543)
T ss_dssp             TTSCEEEEEETTSEEEEEETTSS-SCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred             CCCCEEEEECCCCeEEEEECcCC-CCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence            78999999999999999999  5 677788887 456789999998    654 66666 48999999999988877664


Q ss_pred             c----------ccc-ceeEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeE--EEE------------------------
Q psy10662         73 G----------HIN-DKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMH--AYR------------------------  114 (221)
Q Consensus        73 ~----------~~~-~v~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~--~~~------------------------  114 (221)
                      .          |.. .+..+.++|++.. +++...++.|.+||+.+.+.+.  .+.                        
T Consensus       266 ~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~  345 (543)
T 1nir_A          266 TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS  345 (543)
T ss_dssp             CCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGG
T ss_pred             ccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCC
Confidence            3          222 5677777776553 4556667777777776543322  110                        


Q ss_pred             -----eecccceeEeeEEE----eeCceEEEEEecC-CCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662        115 -----FDTVRSMLESSFVG----HINDKNFVGLATD-GDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE  183 (221)
Q Consensus       115 -----~~~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
                           ++....+++..+..    |......+ ++|+ +.+++++. .|+.|.+||+.+....        ...+..+..+
T Consensus       346 ~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~--------~~~~~~v~~l  416 (543)
T 1nir_A          346 NKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP--------QYAWKKVAEL  416 (543)
T ss_dssp             TEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT--------TTBTSEEEEE
T ss_pred             CeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc--------hhcCeEEEEE
Confidence                 22233333333332    33322222 4676 56666665 5799999999872110        0011122233


Q ss_pred             cccccceeEEEEcCCCcEEEEec-------CCCeEEEEECCccc
Q psy10662        184 DDTNEFVSAVCWRQLSRVLVAAN-------SQGIIKIYVIPIRV  220 (221)
Q Consensus       184 ~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~iw~~~~~~  220 (221)
                      ..|...+..++|+|++++|++++       .++.|.+||+.+++
T Consensus       417 ~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~  460 (543)
T 1nir_A          417 QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD  460 (543)
T ss_dssp             ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred             EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence            35666778899999999999987       27799999999765

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.90  E-value=2.6e-21  Score=141.06  Aligned_cols=198  Identities=9%  Similarity=-0.021  Sum_probs=144.0

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccC--ceEEEEEecCC-cE-EEecCCCcEEEEEcCCCccceeeec-c----
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRK--AVSYVKFLNKE-DI-VSASTDSQLKLWNINKPNCLRSFVG-H----   74 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~-~l-~s~~~d~~v~~wd~~~~~~~~~~~~-~----   74 (221)
                      ++|++++.++.|.+||+. +++.+..+.....  .+..++|+|++ .+ +++..++.|.+||+.+++.+..+.. +    
T Consensus         2 ~~~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~   80 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTE-KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER   80 (337)
T ss_dssp             EEEEEEETTTEEEEEETT-TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred             cEEEEcCCCCeEEEEECC-CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence            578999999999999998 6777777763322  58899999865 44 5666789999999999888766642 1    


Q ss_pred             ccceeEEEEeCCCCEEEEec------------CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         75 INDKNFVGLATDGDYVACGS------------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                      ...+..++|+|++++++++.            .++.|.+||+.+++.+..+             . ....+..++|+|++
T Consensus        81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-------------~-~~~~~~~~~~s~dg  146 (337)
T 1pby_B           81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF-------------E-APRQITMLAWARDG  146 (337)
T ss_dssp             EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE-------------E-CCSSCCCEEECTTS
T ss_pred             cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE-------------e-CCCCcceeEECCCC
Confidence            22678899999999888875            5799999999988776543             1 23456788999999


Q ss_pred             CEEEEecCCCeEEEEEcCCCCceeeeeeec---------cccccc---------------------------------c-
Q psy10662        143 DYVACGSENNSLYIYYKGLSKHMHAYRFDT---------VRSMLE---------------------------------R-  179 (221)
Q Consensus       143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---------~~~~~~---------------------------------~-  179 (221)
                      ++++++  ++.|++||+.+++....+....         .+..+.                                 . 
T Consensus       147 ~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  224 (337)
T 1pby_B          147 SKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM  224 (337)
T ss_dssp             SCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEE
T ss_pred             CEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEE
Confidence            988877  6889999998877654443211         000000                                 0 


Q ss_pred             --------cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        180 --------DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       180 --------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                              ......+...+.+++|+|+|++|+++  ++.|.+||+.+++
T Consensus       225 d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~  271 (337)
T 1pby_B          225 DLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA  271 (337)
T ss_dssp             ETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE
T ss_pred             eCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc
Confidence                    00011223346679999999999988  7999999998764

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.90  E-value=6.1e-23  Score=164.06  Aligned_cols=203  Identities=12%  Similarity=0.113  Sum_probs=140.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC---ceEEEEEecCCc-EEEecCC---------CcEEEEEcCCCcc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK---AVSYVKFLNKED-IVSASTD---------SQLKLWNINKPNC   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~-l~s~~~d---------~~v~~wd~~~~~~   67 (221)
                      |||+++++ +.||.|++||+. +++....+..|..   .|.+++|+|++. |++++.+         +.+.+||+.+++.
T Consensus        26 pdg~~~~~-~~dg~i~~~d~~-~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~  103 (723)
T 1xfd_A           26 SDTEFIYR-EQKGTVRLWNVE-TNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP  103 (723)
T ss_dssp             SSSCBCCC-CSSSCEEEBCGG-GCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred             CCCcEEEE-eCCCCEEEEECC-CCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence            68887776 689999999998 6666666666654   499999998655 7777654         7788999998876


Q ss_pred             ceee---eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC---------ceEE
Q psy10662         68 LRSF---VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN---------DKNF  135 (221)
Q Consensus        68 ~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~  135 (221)
                       ..+   ..|...+..++|+|+|+.|+.++. +.|.+||+.+++......... ...   .+.++..         .+..
T Consensus       104 -~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~-~~~---~~~g~~~~v~~ee~~~~~~~  177 (723)
T 1xfd_A          104 -QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK-EGV---IYNGLSDWLYEEEILKTHIA  177 (723)
T ss_dssp             -EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB-TTT---EEEEECCHHHHHTTSSSSEE
T ss_pred             -EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC-CCc---eECcccceeEEEEeccCcce
Confidence             233   234445889999999999998876 789999998877654321100 000   0111111         2378


Q ss_pred             EEEecCCCEEEEecCCC----------------------------------eEEEEEcCCCCceeeeeeecccccccccc
Q psy10662        136 VGLATDGDYVACGSENN----------------------------------SLYIYYKGLSKHMHAYRFDTVRSMLERDR  181 (221)
Q Consensus       136 ~~~~~~~~~l~~~~~d~----------------------------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~  181 (221)
                      ++|+|||+.|+.++.++                                  .|++||+.+++....+..         ..
T Consensus       178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~---------~~  248 (723)
T 1xfd_A          178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP---------PD  248 (723)
T ss_dssp             EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC---------CC
T ss_pred             EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC---------Cc
Confidence            99999999999887543                                  677777766553222210         00


Q ss_pred             cccccccceeEEEEcCCCcEEEEecC----CCeEEEEECCccc
Q psy10662        182 NEDDTNEFVSAVCWRQLSRVLVAANS----QGIIKIYVIPIRV  220 (221)
Q Consensus       182 ~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~~  220 (221)
                      ....+...+..++|+|||++|++.+.    +..|++||+.+++
T Consensus       249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~  291 (723)
T 1xfd_A          249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV  291 (723)
T ss_dssp             CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred             cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence            11124567899999999999877643    4689999998765

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.90  E-value=2.2e-21  Score=141.83  Aligned_cols=189  Identities=6%  Similarity=0.043  Sum_probs=130.2

Q ss_pred             eEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEecCCc-EEEecCC-CcEEEEEcC--CCc--cceeeecccc
Q psy10662          5 HLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLNKED-IVSASTD-SQLKLWNIN--KPN--CLRSFVGHIN   76 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d-~~v~~wd~~--~~~--~~~~~~~~~~   76 (221)
                      ++++++.++.|++|++...+  +.+..+ .+...+.+++|+|++. |++++.+ +.|.+|++.  +++  .+..+..+ .
T Consensus         7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~   84 (343)
T 1ri6_A            7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-G   84 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-S
T ss_pred             EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-C
Confidence            44454789999999996333  333343 4778899999998654 7777765 999999997  444  33344333 3


Q ss_pred             ceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeE
Q psy10662         77 DKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSL  154 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i  154 (221)
                      .+..++|+|+++++++++ .++.|.+||+..+......          ..+ .....+.+++|+|+++++++++ .++.|
T Consensus        85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~----------~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v  153 (343)
T 1ri6_A           85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV----------DVV-EGLDGCHSANISPDNRTLWVPALKQDRI  153 (343)
T ss_dssp             CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE----------EEE-CCCTTBCCCEECTTSSEEEEEEGGGTEE
T ss_pred             CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccc----------ccc-cCCCCceEEEECCCCCEEEEecCCCCEE
Confidence            789999999999776555 5889999998433221111          111 2234578899999999888777 89999


Q ss_pred             EEEEcCC-CCceeee--eeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        155 YIYYKGL-SKHMHAY--RFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       155 ~~~d~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      .+||+.+ ++.....  ....            .....+..++|+|++++|+++ ..++.|.+|++..
T Consensus       154 ~~~d~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~  209 (343)
T 1ri6_A          154 CLFTVSDDGHLVAQDPAEVTT------------VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD  209 (343)
T ss_dssp             EEEEECTTSCEEEEEEEEEEC------------STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred             EEEEecCCCceeeeccccccc------------CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence            9999987 4332211  1100            123457789999999977655 4799999999953

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.90  E-value=1.9e-22  Score=161.72  Aligned_cols=198  Identities=10%  Similarity=0.114  Sum_probs=142.3

Q ss_pred             CCCceEEEEeC-CC-----eEEEEEecCCceeeEEEEeccC------------------------ceEEEEEecCCc-EE
Q psy10662          1 MNSCHLAFGSA-DH-----CVHYYDLRNTKEALAVFKGHRK------------------------AVSYVKFLNKED-IV   49 (221)
Q Consensus         1 ~~~~~l~~~~~-dg-----~i~i~~~~~~~~~~~~~~~~~~------------------------~i~~~~~~~~~~-l~   49 (221)
                      |||++|++++. |+     .|++||+. +++....+..+..                        .+.+++|+|++. |+
T Consensus        46 pdG~~la~~~~~d~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~  124 (741)
T 2ecf_A           46 PDGSRVTFLRGKDSDRNQLDLWSYDIG-SGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLL  124 (741)
T ss_dssp             TTSSEEEEEECCSSCTTEEEEEEEETT-TCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEE
T ss_pred             cCCCEEEEEeccCCCCcccEEEEEECC-CCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEE
Confidence            79999999998 88     89999998 5666555554433                        378999998765 56


Q ss_pred             EecCCCcEEEEEcCCCc--cceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         50 SASTDSQLKLWNINKPN--CLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        50 s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                      +++. +.|++||+.+++  ....+..+...+..++|+|+|++|+.++. +.|.+||+.+++.......  .....   ..
T Consensus       125 ~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~--~~~~~---~~  197 (741)
T 2ecf_A          125 FPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTAD--GSTTI---GN  197 (741)
T ss_dssp             EEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCC--CCSSE---EE
T ss_pred             EEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccC--Cccce---ec
Confidence            5554 999999998873  44456667788999999999999988874 5899999988766432100  00000   00


Q ss_pred             Ee--------eCceEEEEEecCCCEEEEecCCC---------------------------------eEEEEEcCC-CCce
Q psy10662        128 GH--------INDKNFVGLATDGDYVACGSENN---------------------------------SLYIYYKGL-SKHM  165 (221)
Q Consensus       128 ~~--------~~~v~~~~~~~~~~~l~~~~~d~---------------------------------~i~~~d~~~-~~~~  165 (221)
                      +.        ...+..++|+|||++|++++.|+                                 .|.+||+.+ ++..
T Consensus       198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~  277 (741)
T 2ecf_A          198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQ  277 (741)
T ss_dssp             SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCE
T ss_pred             cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceE
Confidence            00        11246799999999999987765                                 778888776 5432


Q ss_pred             eeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-----CCeEEEEECCccc
Q psy10662        166 HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-----QGIIKIYVIPIRV  220 (221)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~  220 (221)
                      ....             ...|...+..++| |||++|+.++.     +..|++||+.+++
T Consensus       278 ~~~~-------------~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~  323 (741)
T 2ecf_A          278 WIDL-------------GKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ  323 (741)
T ss_dssp             EECC-------------CSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred             EecC-------------CCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence            2110             0136678899999 99999987653     6789999998764

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.89  E-value=9e-20  Score=133.83  Aligned_cols=206  Identities=12%  Similarity=0.156  Sum_probs=131.6

Q ss_pred             CCCceEEEEeC---CCeEEEEEecCCce--eeEEEEeccCceEEEEEecCCc-EEEec-CCCcEEEEEcCC-C--cccee
Q psy10662          1 MNSCHLAFGSA---DHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKED-IVSAS-TDSQLKLWNINK-P--NCLRS   70 (221)
Q Consensus         1 ~~~~~l~~~~~---dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~-l~s~~-~d~~v~~wd~~~-~--~~~~~   70 (221)
                      |||+ |++++.   ++.|++|++. .++  .+..+..+...+..++|+|++. |++++ .++.+.+|++.. +  +.+..
T Consensus        49 pdg~-l~~~~~~~~~~~v~~~~~~-~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~  126 (347)
T 3hfq_A           49 AKDC-LYSVDKEDDEGGIAAWQID-GQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDT  126 (347)
T ss_dssp             TTCE-EEEEEEETTEEEEEEEEEE-TTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred             cCCe-EEEEEecCCCceEEEEEec-CCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecce
Confidence            6788 554444   6899999997 443  4445556778899999998654 66666 689999999963 2  22222


Q ss_pred             eec---------cccceeEEEEeCCCCEEEEecCCCeEEEEECC-CCeeeEE-------------EEeeccccee-----
Q psy10662         71 FVG---------HINDKNFVGLATDGDYVACGSENNSLYIYYKG-LSKHMHA-------------YRFDTVRSML-----  122 (221)
Q Consensus        71 ~~~---------~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~~~~-------------~~~~~~~~~~-----  122 (221)
                      +..         ....+.+++|+|+++++++...++.|.+||+. .++....             +.+.+.....     
T Consensus       127 ~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~  206 (347)
T 3hfq_A          127 VQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE  206 (347)
T ss_dssp             EECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred             eecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC
Confidence            211         11247889999999977777778999999998 4432211             1121111100     


Q ss_pred             -------------------EeeEEEee------CceEEEEEecCCCEEE-EecCCCeEEEEEcCCCCceeeeeeeccccc
Q psy10662        123 -------------------ESSFVGHI------NDKNFVGLATDGDYVA-CGSENNSLYIYYKGLSKHMHAYRFDTVRSM  176 (221)
Q Consensus       123 -------------------~~~~~~~~------~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~  176 (221)
                                         ...+....      ..+..++|+|+|++|+ +...++.|.+|++........+.       
T Consensus       207 ~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~-------  279 (347)
T 3hfq_A          207 LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQ-------  279 (347)
T ss_dssp             TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEE-------
T ss_pred             CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeE-------
Confidence                               00011011      2366799999999774 55568999999986432211111       


Q ss_pred             ccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEEC--Cccc
Q psy10662        177 LERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVI--PIRV  220 (221)
Q Consensus       177 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~--~~~~  220 (221)
                           ....+...+..++|+|+|++|++++. ++.|.+|++  .+++
T Consensus       280 -----~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~  321 (347)
T 3hfq_A          280 -----QISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK  321 (347)
T ss_dssp             -----EEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred             -----EEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence                 11123445789999999998888775 589999954  4554

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.89  E-value=2.1e-20  Score=136.52  Aligned_cols=199  Identities=8%  Similarity=0.087  Sum_probs=132.9

Q ss_pred             CCCceEEEEeCC-CeEEEEEecC-Cc--eeeEEEEeccCceEEEEEecCCc-EEEec-CCCcEEEEEcC---CCccceee
Q psy10662          1 MNSCHLAFGSAD-HCVHYYDLRN-TK--EALAVFKGHRKAVSYVKFLNKED-IVSAS-TDSQLKLWNIN---KPNCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~d-g~i~i~~~~~-~~--~~~~~~~~~~~~i~~~~~~~~~~-l~s~~-~d~~v~~wd~~---~~~~~~~~   71 (221)
                      |++++|++++.+ +.|.+|++.. ++  +.+..+..+ ..+..++|+|++. +++++ .++.|.+||+.   ..+.+..+
T Consensus        47 pdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~  125 (343)
T 1ri6_A           47 PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV  125 (343)
T ss_dssp             TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE
T ss_pred             CCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc
Confidence            688888888876 9999999962 12  334455543 3789999998654 55544 58899999994   33444444


Q ss_pred             eccccceeEEEEeCCCCEEEEec-CCCeEEEEECCC-CeeeEEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEe
Q psy10662         72 VGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGL-SKHMHAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACG  148 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~  148 (221)
                      .. ...+.+++|+|+++++++++ .++.|.+||+.+ ++......         ..... ....+..++|+|++++++++
T Consensus       126 ~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~pdg~~l~~~  195 (343)
T 1ri6_A          126 EG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP---------AEVTTVEGAGPRHMVFHPNEQYAYCV  195 (343)
T ss_dssp             CC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE---------EEEECSTTCCEEEEEECTTSSEEEEE
T ss_pred             cC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc---------cccccCCCCCcceEEECCCCCEEEEE
Confidence            43 34588999999999877776 889999999987 44322110         00111 22367789999999976554


Q ss_pred             -cCCCeEEEEEcCC--CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE-EecCCCeEEEEECC
Q psy10662        149 -SENNSLYIYYKGL--SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV-AANSQGIIKIYVIP  217 (221)
Q Consensus       149 -~~d~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~  217 (221)
                       ..++.|.+|++..  +..........       ..........+..++|+|+|++|+ +...++.|.+|++.
T Consensus       196 ~~~~~~i~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~  261 (343)
T 1ri6_A          196 NELNSSVDVWELKDPHGNIECVQTLDM-------MPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS  261 (343)
T ss_dssp             ETTTTEEEEEESSCTTSCCEEEEEEEC-------SCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             eCCCCEEEEEEecCCCCcEEEEeeccc-------cCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence             5889999999964  32211111110       000001233567899999998877 45579999999997

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.88  E-value=6.6e-21  Score=136.26  Aligned_cols=179  Identities=15%  Similarity=0.173  Sum_probs=128.1

Q ss_pred             EEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-Cccceeeecc-ccceeEEEEeC
Q psy10662          8 FGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-PNCLRSFVGH-INDKNFVGLAT   85 (221)
Q Consensus         8 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~-~~~v~~~~~~~   85 (221)
                      .++.++.|++||+. +++.. .+..|...|.+++|+|++..+..+.++.|++||+.+ ++.......+ ...+.+++|+|
T Consensus        17 ~~~~~~~i~~~d~~-~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp   94 (297)
T 2ojh_A           17 GGSMRSSIEIFNIR-TRKMR-VVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP   94 (297)
T ss_dssp             -CCCCEEEEEEETT-TTEEE-EEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred             CCCcceeEEEEeCC-CCcee-eeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence            34578899999998 55544 455689999999999876644444589999999998 7776655555 36789999999


Q ss_pred             CCCEEEEec--CCCeEEEE--ECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE-EecCCCeEEEEEcC
Q psy10662         86 DGDYVACGS--ENNSLYIY--YKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA-CGSENNSLYIYYKG  160 (221)
Q Consensus        86 ~~~~l~~~~--~d~~v~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~  160 (221)
                      +++++++++  .++...+|  ++.+++. ..             +. ....+..++|+|+++.|+ +++.++.+.+|+++
T Consensus        95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~-------------~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~  159 (297)
T 2ojh_A           95 DGALYAISDKVEFGKSAIYLLPSTGGTP-RL-------------MT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD  159 (297)
T ss_dssp             TSSEEEEEECTTTSSCEEEEEETTCCCC-EE-------------CC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred             CCCEEEEEEeCCCCcceEEEEECCCCce-EE-------------ee-cCCCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence            999999888  33444454  5444332 11             11 223478899999999877 78889999999864


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECC
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIP  217 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~  217 (221)
                      ......              ..+..+...+.+++|+|+|++|+.++ .++.+++|++.
T Consensus       160 ~~~~~~--------------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~  203 (297)
T 2ojh_A          160 IDSGVE--------------TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR  203 (297)
T ss_dssp             TTTCCE--------------EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             CCCCcc--------------eEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence            322110              01124556789999999999887766 58999999875

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.87  E-value=2.8e-21  Score=154.92  Aligned_cols=191  Identities=10%  Similarity=0.010  Sum_probs=138.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |||++|++++. +.|++||+. ++.  ....+..|...+..++|+|++. |+.++ ++.|++||+.+++.......+...
T Consensus       118 pDg~~l~~~~~-~~i~~~d~~-~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~  194 (741)
T 2ecf_A          118 PDAQRLLFPLG-GELYLYDLK-QEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTT  194 (741)
T ss_dssp             TTSSEEEEEET-TEEEEEESS-SCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSS
T ss_pred             CCCCEEEEEeC-CcEEEEECC-CCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccc
Confidence            78999999886 899999998 441  3445666888899999999766 55554 679999999887765544333322


Q ss_pred             ----------------eeEEEEeCCCCEEEEecCCC---------------------------------eEEEEECCC-C
Q psy10662         78 ----------------KNFVGLATDGDYVACGSENN---------------------------------SLYIYYKGL-S  107 (221)
Q Consensus        78 ----------------v~~~~~~~~~~~l~~~~~d~---------------------------------~v~iwd~~~-~  107 (221)
                                      +..++|+|||++|++++.|+                                 .|.+||+.+ +
T Consensus       195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~  274 (741)
T 2ecf_A          195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA  274 (741)
T ss_dssp             EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred             eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence                            47899999999998887665                                 778888877 6


Q ss_pred             eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-----CCeEEEEEcCCCCceeeeeeeccccccccccc
Q psy10662        108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-----NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRN  182 (221)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  182 (221)
                      +.....           ....+...+..++| |||+.|++++.     +..|++||+.+++....+.....         
T Consensus       275 ~~~~~~-----------~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~---------  333 (741)
T 2ecf_A          275 QTQWID-----------LGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP---------  333 (741)
T ss_dssp             CCEEEC-----------CCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS---------
T ss_pred             ceEEec-----------CCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC---------
Confidence            543221           00135567889999 99999987653     57899999988876544431110         


Q ss_pred             ccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        183 EDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       183 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                        ..-..+..++|+|||+++++++.||.+++|.++
T Consensus       334 --~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~  366 (741)
T 2ecf_A          334 --TWVPLHNSLRFLDDGSILWSSERTGFQHLYRID  366 (741)
T ss_dssp             --SCCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred             --CcCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence              000134678999999999999999988888765

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.87  E-value=1.1e-20  Score=147.78  Aligned_cols=184  Identities=11%  Similarity=0.022  Sum_probs=130.1

Q ss_pred             CCCceEEEEeC-CCeEEEEEecCCceeeEEEEecc-CceEEEEEecCCcEEEecC---CCcEEEEEcCC--Cccceeeec
Q psy10662          1 MNSCHLAFGSA-DHCVHYYDLRNTKEALAVFKGHR-KAVSYVKFLNKEDIVSAST---DSQLKLWNINK--PNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~l~s~~~---d~~v~~wd~~~--~~~~~~~~~   73 (221)
                      |||+.||+++. ||+++||++. +++..+ +..|. ..+..++|+|+..+++++.   +....+|.+..  ......+..
T Consensus        31 ~DG~~la~~s~~~g~~~lw~~~-~g~~~~-lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~  108 (582)
T 3o4h_A           31 VDGDKLLVVGFSEGSVNAYLYD-GGETVK-LNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA  108 (582)
T ss_dssp             ETTTEEEEEEEETTEEEEEEEE-TTEEEE-CCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCEECTT
T ss_pred             CCCCeEEEEEccCCceeEEEEc-CCCcEe-eecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccccccC
Confidence            68999999887 9999999996 555444 44455 6899999999855555554   45566665543  222223322


Q ss_pred             cccceeEEEEeCCCC--EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         74 HINDKNFVGLATDGD--YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      . ..+...+|+|+++  .+++++.++ +.+||+.+++....              ..+..  .+++|+|||++|+.++.+
T Consensus       109 ~-~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l--------------~~~~~--~~~~~spDG~~la~~~~~  170 (582)
T 3o4h_A          109 V-KPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGLREL--------------ARLPG--FGFVSDIRGDLIAGLGFF  170 (582)
T ss_dssp             S-CSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEE--------------EEESS--CEEEEEEETTEEEEEEEE
T ss_pred             C-CCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEe--------------ecCCC--ceEEECCCCCEEEEEEEc
Confidence            2 2344668888886  344444454 55999988765432              22222  789999999999988777


Q ss_pred             ----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC--eEEEEECCccc
Q psy10662        152 ----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG--IIKIYVIPIRV  220 (221)
Q Consensus       152 ----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~  220 (221)
                          +.|++||+.+++.. .+               ..|...+..++|+|||++|+++..++  .|++||+.+++
T Consensus       171 ~~~~~~i~~~d~~~g~~~-~l---------------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~  229 (582)
T 3o4h_A          171 GGGRVSLFTSNLSSGGLR-VF---------------DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS  229 (582)
T ss_dssp             ETTEEEEEEEETTTCCCE-EE---------------CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred             CCCCeEEEEEcCCCCCce-Ee---------------ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence                78999998877643 11               24666789999999999999888888  89999998765

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.86  E-value=1.3e-20  Score=150.41  Aligned_cols=196  Identities=13%  Similarity=0.102  Sum_probs=133.1

Q ss_pred             CceEEEEeCCCeEEEEEecCCceee-EEEEecc-----------------CceEEEEEecCCcEEEecCCCcEEEEEcCC
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEAL-AVFKGHR-----------------KAVSYVKFLNKEDIVSASTDSQLKLWNINK   64 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~-~~~~~~~-----------------~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~   64 (221)
                      ++.+++++.++ | +||+. +++.+ ..+..+.                 ..|.+++|+|++.++.+ .++.+++||+.+
T Consensus        35 g~~~~~~~~~~-i-~~d~~-tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~-~~~~i~~~d~~~  110 (706)
T 2z3z_A           35 GDNYVFIEGDD-L-VFNKA-NGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLF-TQGGLVGFDMLA  110 (706)
T ss_dssp             TTEEEEEETTE-E-EEEC--------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEE-ETTEEEEEETTT
T ss_pred             CCeEEEEeCCc-E-EEECC-CCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEE-ECCEEEEEECCC
Confidence            45677777788 8 99998 56552 3444443                 46999999998555544 569999999988


Q ss_pred             CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCC-----CeeeEEEEeecccceeEe---eEEEeeCceEEE
Q psy10662         65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL-----SKHMHAYRFDTVRSMLES---SFVGHINDKNFV  136 (221)
Q Consensus        65 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~  136 (221)
                      ++... +..+...+.+++|+|+|++++++ .++.|.+||+.+     ++........  ......   ....+...+.++
T Consensus       111 ~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~--~~~~~~g~~~~~ee~~~~~~~  186 (706)
T 2z3z_A          111 RKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDG--TETLVYGQAVHQREFGIEKGT  186 (706)
T ss_dssp             TEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCC--BTTEEESSCCGGGCTTCCCSE
T ss_pred             CceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCC--CCCeEcccchhhhhcCCCceE
Confidence            76544 34466778999999999999885 678999999987     6554321000  000000   000011225789


Q ss_pred             EEecCCCEEEEec---------------------------------CCCeEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662        137 GLATDGDYVACGS---------------------------------ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE  183 (221)
Q Consensus       137 ~~~~~~~~l~~~~---------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
                      +|+|||++|++++                                 .+..|++||+.+++.....             ..
T Consensus       187 ~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~-------------~~  253 (706)
T 2z3z_A          187 FWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ-------------TG  253 (706)
T ss_dssp             EECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC-------------CC
T ss_pred             EECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec-------------cC
Confidence            9999999999887                                 4467999998776532211             11


Q ss_pred             cccccceeEEEEcCCCcEEEEecCCC-----eEEEEECCcc
Q psy10662        184 DDTNEFVSAVCWRQLSRVLVAANSQG-----IIKIYVIPIR  219 (221)
Q Consensus       184 ~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~  219 (221)
                      ..+...+..++|+|||++|++++.++     .|.+||+.++
T Consensus       254 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g  294 (706)
T 2z3z_A          254 EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG  294 (706)
T ss_dssp             SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred             CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence            23566789999999999999887665     9999999887

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.86  E-value=2.6e-20  Score=148.63  Aligned_cols=192  Identities=9%  Similarity=0.054  Sum_probs=136.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-----Cccceeeeccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-----PNCLRSFVGHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-----~~~~~~~~~~~   75 (221)
                      || +.++.+ .++.|++||+. +++.. .+..+...+.+++|+|++..++...++.|++||+.+     ++.......+.
T Consensus        91 pd-~~~~~~-~~~~i~~~d~~-~~~~~-~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~  166 (706)
T 2z3z_A           91 GR-GLVVLF-TQGGLVGFDML-ARKVT-YLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGT  166 (706)
T ss_dssp             TT-TEEEEE-ETTEEEEEETT-TTEEE-EEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCB
T ss_pred             CC-CeEEEE-ECCEEEEEECC-CCceE-EccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCC
Confidence            56 455554 45999999997 55543 445577789999999976533335789999999988     76655443333


Q ss_pred             cc--------------eeEEEEeCCCCEEEEec---------------------------------CCCeEEEEECCCCe
Q psy10662         76 ND--------------KNFVGLATDGDYVACGS---------------------------------ENNSLYIYYKGLSK  108 (221)
Q Consensus        76 ~~--------------v~~~~~~~~~~~l~~~~---------------------------------~d~~v~iwd~~~~~  108 (221)
                      ..              +.++.|+|||++|++++                                 .+..|.+||+.+++
T Consensus       167 ~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~  246 (706)
T 2z3z_A          167 ETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK  246 (706)
T ss_dssp             TTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE
T ss_pred             CCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc
Confidence            32              48999999999998887                                 44679999998876


Q ss_pred             eeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-----eEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662        109 HMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-----SLYIYYKGLSKHMHAYRFDTVRSMLERDRNE  183 (221)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
                      .....           ....+...+..++|+|+|+.|++++.++     .|++||+.+++....+.....          
T Consensus       247 ~~~~~-----------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~----------  305 (706)
T 2z3z_A          247 TVYLQ-----------TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD----------  305 (706)
T ss_dssp             EEECC-----------CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC----------
T ss_pred             eEeec-----------cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC----------
Confidence            53221           0113456788999999999999887765     899999988743332211100          


Q ss_pred             cccccceeEEEEcC--CCcEEEEecCCCeEEEEECC
Q psy10662        184 DDTNEFVSAVCWRQ--LSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       184 ~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ......+..++|+|  ||++|++++.|+.+++|.++
T Consensus       306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~  341 (706)
T 2z3z_A          306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD  341 (706)
T ss_dssp             SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred             CCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence            01111246789999  99999999999999999875

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.86  E-value=1.7e-20  Score=155.46  Aligned_cols=183  Identities=9%  Similarity=0.047  Sum_probs=145.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC-ceEEEEEecCC-cEEEecCCCcEE-EEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK-AVSYVKFLNKE-DIVSASTDSQLK-LWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~-~l~s~~~d~~v~-~wd~~~~~~~~~~~~~~~~   77 (221)
                      |||+.|++++ ++.|.+|++. .+.. ..+..|.. .+..++|+ ++ .++.++.++.+. +||+.+++... +..|...
T Consensus       306 pdG~~la~~~-~~~i~~~~~~-~~~~-~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~  380 (1045)
T 1k32_A          306 LDGDLIAFVS-RGQAFIQDVS-GTYV-LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGN  380 (1045)
T ss_dssp             CGGGCEEEEE-TTEEEEECTT-SSBE-EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCS
T ss_pred             CCCCEEEEEE-cCEEEEEcCC-CCce-EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccc
Confidence            6899999987 7899999987 4443 34556777 89999999 54 577777788888 99988766543 3467788


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-----
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-----  152 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----  152 (221)
                      +..++|+|+|+++++++.++.|++||+.+++....             ..+|...+..++|+|+|++|++++.++     
T Consensus       381 ~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~-------------~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~  447 (1045)
T 1k32_A          381 VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI-------------ERSREAMITDFTISDNSRFIAYGFPLKHGETD  447 (1045)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-------------EECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred             eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe-------------ccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence            99999999999999999999999999998876543             246777889999999999998887654     


Q ss_pred             -----eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        153 -----SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       153 -----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                           .|++||+.+++ ...+               ..|...+..++|+|||++|+.++.++...+|+..
T Consensus       448 ~~~~~~i~l~d~~~g~-~~~l---------------~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~  501 (1045)
T 1k32_A          448 GYVMQAIHVYDMEGRK-IFAA---------------TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV  501 (1045)
T ss_dssp             SCCEEEEEEEETTTTE-EEEC---------------SCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred             CCCCCeEEEEECCCCc-EEEe---------------eCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence                 89999998765 2211               2455667889999999999999988877777653

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.86  E-value=1.7e-20  Score=155.37  Aligned_cols=185  Identities=12%  Similarity=0.125  Sum_probs=144.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEe-----------ccCceEEEEEe-cCCc-EEEecCCCcEEEEEcCCCcc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG-----------HRKAVSYVKFL-NKED-IVSASTDSQLKLWNINKPNC   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~-l~s~~~d~~v~~wd~~~~~~   67 (221)
                      |||+.|+.+ .++.|++|++. ... +..+..           |...+.+++|+ |++. +++++ ++.+.+|++..++.
T Consensus       254 pDG~~la~~-~~~~i~~~d~~-~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~  329 (1045)
T 1k32_A          254 TDGRRILFS-KGGSIYIFNPD-TEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYV  329 (1045)
T ss_dssp             ESSSCEEEE-ETTEEEEECTT-TCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBE
T ss_pred             CCCCEEEEE-eCCEEEEecCC-ceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCce
Confidence            588888887 58999999984 333 234433           44579999999 8765 66655 88999999987765


Q ss_pred             ceeeecccc-ceeEEEEeCCCCEEEEecCCCeEE-EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE
Q psy10662         68 LRSFVGHIN-DKNFVGLATDGDYVACGSENNSLY-IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV  145 (221)
Q Consensus        68 ~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~v~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  145 (221)
                      .. +..|.. .+..++|+ +++.++.++.++.+. +||+..++..              .+.++...+..++|+|+|++|
T Consensus       330 ~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~--------------~l~~~~~~~~~~~~SpDG~~l  393 (1045)
T 1k32_A          330 LK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE--------------KFEENLGNVFAMGVDRNGKFA  393 (1045)
T ss_dssp             EE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE--------------ECCCCCCSEEEEEECTTSSEE
T ss_pred             EE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce--------------EecCCccceeeeEECCCCCEE
Confidence            43 555666 89999999 999999888888888 8998766432              123566788999999999999


Q ss_pred             EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC----------eEEEEE
Q psy10662        146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG----------IIKIYV  215 (221)
Q Consensus       146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------~i~iw~  215 (221)
                      ++++.++.|++||+.+++......               .|...+..++|+|||++|++++.++          .|++||
T Consensus       394 a~~~~~~~v~~~d~~tg~~~~~~~---------------~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d  458 (1045)
T 1k32_A          394 VVANDRFEIMTVDLETGKPTVIER---------------SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD  458 (1045)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEE---------------CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred             EEECCCCeEEEEECCCCceEEecc---------------CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence            999999999999998877554432               4666788999999999998887644          999999


Q ss_pred             CCccc
Q psy10662        216 IPIRV  220 (221)
Q Consensus       216 ~~~~~  220 (221)
                      +.+++
T Consensus       459 ~~~g~  463 (1045)
T 1k32_A          459 MEGRK  463 (1045)
T ss_dssp             TTTTE
T ss_pred             CCCCc
Confidence            98764

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.85  E-value=6.4e-21  Score=152.43  Aligned_cols=205  Identities=13%  Similarity=0.153  Sum_probs=135.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC---ceEEEEEecCCc-EEEecC---------CCcEEEEEcCCCcc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK---AVSYVKFLNKED-IVSAST---------DSQLKLWNINKPNC   67 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~-l~s~~~---------d~~v~~wd~~~~~~   67 (221)
                      |||+++++ +.|+.|++||+. +++....+..|..   .+.+++|+|++. |++++.         ++.|++||+.+++.
T Consensus        25 ~dg~~~~~-~~d~~i~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~  102 (719)
T 1z68_A           25 SGQEYLHQ-SADNNIVLYNIE-TGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF  102 (719)
T ss_dssp             SSSEEEEE-CTTSCEEEEESS-SCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred             CCCeEEEE-cCCCCEEEEEcC-CCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence            57765555 469999999998 6666666655543   389999998655 666655         68999999998876


Q ss_pred             ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc---------eEEEEE
Q psy10662         68 LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND---------KNFVGL  138 (221)
Q Consensus        68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------v~~~~~  138 (221)
                      +.... ....+..++|+|||+.|+.+. ++.|++||+.+++..... .+....   ..+.++...         ...++|
T Consensus       103 ~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~-~~~~~~---~v~~g~~~~v~~ee~~~~~~~~~w  176 (719)
T 1z68_A          103 VRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT-FNGREN---KIFNGIPDWVYEEEMLATKYALWW  176 (719)
T ss_dssp             CCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC-CCCBTT---TEEESSCCHHHHHHTTCSSCCEEE
T ss_pred             cccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe-cCCCcC---CeEcccccceeeeecccCcccEEE
Confidence            31111 124688999999999998885 779999999887664321 000000   011122211         247999


Q ss_pred             ecCCCEEEEecCCC----------------------------------eEEEEEcCCCCceeeeeeeccccccccccccc
Q psy10662        139 ATDGDYVACGSENN----------------------------------SLYIYYKGLSKHMHAYRFDTVRSMLERDRNED  184 (221)
Q Consensus       139 ~~~~~~l~~~~~d~----------------------------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (221)
                      +|||+.|+.++.|.                                  .|++||+.+++....+...       ....+.
T Consensus       177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~-------~~~~~~  249 (719)
T 1z68_A          177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP-------VPAMIA  249 (719)
T ss_dssp             CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC-------CCHHHH
T ss_pred             CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc-------CCccCC
Confidence            99999999887652                                  6777877665432101100       001123


Q ss_pred             ccccceeEEEEcCCCcEEEEecCC----CeEEEEE----CCccc
Q psy10662        185 DTNEFVSAVCWRQLSRVLVAANSQ----GIIKIYV----IPIRV  220 (221)
Q Consensus       185 ~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iw~----~~~~~  220 (221)
                      +|...+..++|+||++++++....    ..|.+||    +.+++
T Consensus       250 ~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~  293 (719)
T 1z68_A          250 SSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD  293 (719)
T ss_dssp             TSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred             CCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence            567789999999999888774432    3588899    76654

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.85  E-value=1.2e-20  Score=150.80  Aligned_cols=191  Identities=10%  Similarity=-0.021  Sum_probs=129.0

Q ss_pred             CCCceEEEEeCC---------CeEEEEEecCCceeeEEEE---eccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCcc
Q psy10662          1 MNSCHLAFGSAD---------HCVHYYDLRNTKEALAVFK---GHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNC   67 (221)
Q Consensus         1 ~~~~~l~~~~~d---------g~i~i~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~   67 (221)
                      |||++|++++.+         +.|++||+. +++. ..+.   .|...+..++|+|++ .|+.++. +.|++||+.+++.
T Consensus        70 pDg~~l~~~~~~~~~~~~~~~~~i~~~d~~-~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~  146 (723)
T 1xfd_A           70 PDREYALFSYNVEPIYQHSYTGYYVLSKIP-HGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA  146 (723)
T ss_dssp             TTSSEEEEEESCCCCSSSCCCSEEEEEESS-SCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC
T ss_pred             CCCCEEEEEecCccceeecceeeEEEEECC-CCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce
Confidence            799999999774         788899998 4543 3333   344458899999866 4666654 8999999998877


Q ss_pred             ceeeeccccce------------------eEEEEeCCCCEEEEecCCC--------------------------------
Q psy10662         68 LRSFVGHINDK------------------NFVGLATDGDYVACGSENN--------------------------------   97 (221)
Q Consensus        68 ~~~~~~~~~~v------------------~~~~~~~~~~~l~~~~~d~--------------------------------   97 (221)
                      ......+...+                  .+++|+|||++|++++.++                                
T Consensus       147 ~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  226 (723)
T 1xfd_A          147 IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENP  226 (723)
T ss_dssp             EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCC
T ss_pred             EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCC
Confidence            66554433333                  7899999999998877542                                


Q ss_pred             --eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC----CCeEEEEEcCCCCceeeeeee
Q psy10662         98 --SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE----NNSLYIYYKGLSKHMHAYRFD  171 (221)
Q Consensus        98 --~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~~~~~~~~~  171 (221)
                        .|.+||+.+++....+...       .....+...+..++|+|||+++++...    +..|++||+.+++....+.. 
T Consensus       227 ~~~l~~~d~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-  298 (723)
T 1xfd_A          227 SISLHVIGLNGPTHDLEMMPP-------DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-  298 (723)
T ss_dssp             EEEEEEEESSSSCCCEECCCC-------CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-
T ss_pred             eeEEEEEECCCCceeEEeeCC-------ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-
Confidence              6777777666543222000       000112456889999999998876643    35799999988875544321 


Q ss_pred             cccccccccccccccccce----eEEEEcCCCcEEEEe--cCCC------eEEEEE
Q psy10662        172 TVRSMLERDRNEDDTNEFV----SAVCWRQLSRVLVAA--NSQG------IIKIYV  215 (221)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~--~~dg------~i~iw~  215 (221)
                                   .+...+    ..++|+|||+.|+..  ..++      .|.+|+
T Consensus       299 -------------~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d  341 (723)
T 1xfd_A          299 -------------ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS  341 (723)
T ss_dssp             -------------ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred             -------------ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence                         112222    368999999977754  4566      567777

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.85  E-value=2.7e-18  Score=126.64  Aligned_cols=200  Identities=11%  Similarity=0.108  Sum_probs=130.0

Q ss_pred             CCCceEEEEeCC----CeEEEEEecCC-ce--eeEEEEeccCceEEEEEecCCcEEEec-CCCcEEEEEcCCCccceeee
Q psy10662          1 MNSCHLAFGSAD----HCVHYYDLRNT-KE--ALAVFKGHRKAVSYVKFLNKEDIVSAS-TDSQLKLWNINKPNCLRSFV   72 (221)
Q Consensus         1 ~~~~~l~~~~~d----g~i~i~~~~~~-~~--~~~~~~~~~~~i~~~~~~~~~~l~s~~-~d~~v~~wd~~~~~~~~~~~   72 (221)
                      ||+++|++++.+    +.|.+|++... ++  .+.....+......+++ +++.|++++ .++.+.+|++.....+..+.
T Consensus        59 pdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~  137 (361)
T 3scy_A           59 ADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPAS  137 (361)
T ss_dssp             TTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCS
T ss_pred             CCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccc
Confidence            688989998886    79999999743 33  33334445566778888 666666554 68899999997543332211


Q ss_pred             ---cc-----------ccceeEEEEeCCCCEEEE-ecCCCeEEEEECCCCee------eEEEEeecccceeEeeEEEeeC
Q psy10662         73 ---GH-----------INDKNFVGLATDGDYVAC-GSENNSLYIYYKGLSKH------MHAYRFDTVRSMLESSFVGHIN  131 (221)
Q Consensus        73 ---~~-----------~~~v~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  131 (221)
                         .+           ...+.+++|+|+++++++ ...++.|.+|++.....      +...      ............
T Consensus       138 ~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~  211 (361)
T 3scy_A          138 DVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK------GTPEAFKVAPGS  211 (361)
T ss_dssp             EEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE------EEEEEEECCTTC
T ss_pred             eeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec------ccccceecCCCC
Confidence               11           223578999999996654 45588999998875431      1100      000000112234


Q ss_pred             ceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC--C
Q psy10662        132 DKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS--Q  208 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d  208 (221)
                      .+..++|+|+|+++++++ .++.|.+|++.++.........          ....+......++|+|||++|+++..  +
T Consensus       212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~----------~~~~~~~~~~~i~~spdg~~l~v~~~~~~  281 (361)
T 3scy_A          212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA----------ADTVNAQGSGDIHLSPDGKYLYASNRLKA  281 (361)
T ss_dssp             CEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE----------SCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred             CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe----------cCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence            567899999999887776 6899999999865432211111          11123344679999999999877654  5


Q ss_pred             CeEEEEECC
Q psy10662        209 GIIKIYVIP  217 (221)
Q Consensus       209 g~i~iw~~~  217 (221)
                      +.|.+|++.
T Consensus       282 ~~i~v~~~~  290 (361)
T 3scy_A          282 DGVAIFKVD  290 (361)
T ss_dssp             CEEEEEEEC
T ss_pred             CEEEEEEEc
Confidence            899999995

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.85  E-value=7.1e-19  Score=129.75  Aligned_cols=197  Identities=9%  Similarity=0.069  Sum_probs=126.4

Q ss_pred             CCceEEEEe-CCCeEEEEEecCCcee--eEEEEec-----------cCceEEEEEecCCc-EEE-ecCCCcEEEEEcCCC
Q psy10662          2 NSCHLAFGS-ADHCVHYYDLRNTKEA--LAVFKGH-----------RKAVSYVKFLNKED-IVS-ASTDSQLKLWNINKP   65 (221)
Q Consensus         2 ~~~~l~~~~-~dg~i~i~~~~~~~~~--~~~~~~~-----------~~~i~~~~~~~~~~-l~s-~~~d~~v~~wd~~~~   65 (221)
                      ++++|++++ .++.|.+|++...+..  +.....+           ...+.+++|+|++. +++ ...++.|.+|++...
T Consensus       108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~  187 (361)
T 3scy_A          108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN  187 (361)
T ss_dssp             CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence            456666665 5789999999743321  1111112           22358899998664 544 445899999998754


Q ss_pred             cc------c-------eeeeccccceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC
Q psy10662         66 NC------L-------RSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN  131 (221)
Q Consensus        66 ~~------~-------~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (221)
                      ..      +       .....+......++|+|+|+++++++ .++.|.+||+.+++.......        .....+..
T Consensus       188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~--------~~~~~~~~  259 (361)
T 3scy_A          188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV--------AADTVNAQ  259 (361)
T ss_dssp             CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE--------ESCSSCCC
T ss_pred             CCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE--------ecCCCCCC
Confidence            31      1       11122344578999999999876666 689999999886644221100        01112233


Q ss_pred             ceEEEEEecCCCEEEEecCC--CeEEEEEcCC--CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-
Q psy10662        132 DKNFVGLATDGDYVACGSEN--NSLYIYYKGL--SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-  206 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d--~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  206 (221)
                      .+..++|+|+|++|+++..+  +.|.+|++..  ++......+             .. ...+..++|+|+|++|++++ 
T Consensus       260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~-------------~~-g~~~~~~~~spdg~~l~~~~~  325 (361)
T 3scy_A          260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ-------------LT-GIHPRNFIITPNGKYLLVACR  325 (361)
T ss_dssp             CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE-------------EC-SSCCCEEEECTTSCEEEEEET
T ss_pred             CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe-------------cC-CCCCceEEECCCCCEEEEEEC
Confidence            46789999999998776654  8999999862  332111110             01 23567899999999888877 


Q ss_pred             CCCeEEEEECC--ccc
Q psy10662        207 SQGIIKIYVIP--IRV  220 (221)
Q Consensus       207 ~dg~i~iw~~~--~~~  220 (221)
                      .++.|.+|++.  +++
T Consensus       326 ~~~~v~v~~~d~~~g~  341 (361)
T 3scy_A          326 DTNVIQIFERDQATGL  341 (361)
T ss_dssp             TTTEEEEEEECTTTCC
T ss_pred             CCCCEEEEEEECCCCc
Confidence            67999996554  554

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.85  E-value=7.1e-19  Score=130.03  Aligned_cols=202  Identities=9%  Similarity=0.068  Sum_probs=131.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEec-cCceEEEEEecCCc---EEEec-------------CCCcEEEEEcC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH-RKAVSYVKFLNKED---IVSAS-------------TDSQLKLWNIN   63 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~---l~s~~-------------~d~~v~~wd~~   63 (221)
                      ||+++|++++.+ .|.+|++..+++........ .+.+..++|+|++.   ++++.             .++.+.+|++.
T Consensus        49 pdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~  127 (365)
T 1jof_A           49 HERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVS  127 (365)
T ss_dssp             TTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEEC
T ss_pred             CCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccC
Confidence            688989988887 99999986345544333211 13356688898765   33543             68999999997


Q ss_pred             -CCccceeee----ccccceeEEEEeCCCCEEEEec-CCCeEEEEECC-CCeeeEEEEeecccceeEeeEE--EeeCceE
Q psy10662         64 -KPNCLRSFV----GHINDKNFVGLATDGDYVACGS-ENNSLYIYYKG-LSKHMHAYRFDTVRSMLESSFV--GHINDKN  134 (221)
Q Consensus        64 -~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~  134 (221)
                       +++....+.    .+...+.+++|+|+|++++++. .++.|.+||+. +++....           ..+.  .+...+.
T Consensus       128 ~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~-----------~~~~~~~~g~~p~  196 (365)
T 1jof_A          128 ETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELV-----------GSVDAPDPGDHPR  196 (365)
T ss_dssp             TTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEE-----------EEEECSSTTCCEE
T ss_pred             CCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEe-----------eeEecCCCCCCCC
Confidence             455443332    2445789999999999877664 46799999997 5654211           1111  1235688


Q ss_pred             EEEEecCCCEEEEecC-CCeEEEEEcCC--CCceeee-eeeccccccccccccccccc------ceeEEE-EcCCCcEEE
Q psy10662        135 FVGLATDGDYVACGSE-NNSLYIYYKGL--SKHMHAY-RFDTVRSMLERDRNEDDTNE------FVSAVC-WRQLSRVLV  203 (221)
Q Consensus       135 ~~~~~~~~~~l~~~~~-d~~i~~~d~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~v~~~~-~~~~~~~l~  203 (221)
                      .++|+|+|+++++++. ++.|.+|++..  ++..... .....      .....++..      .+..++ |+|||++|+
T Consensus       197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~  270 (365)
T 1jof_A          197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI------PPGIPDRDPETGKGLYRADVCALTFSGKYMF  270 (365)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS------CTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred             EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC------CCCcCCcccccccccccccEEEECCCCCEEE
Confidence            9999999999887765 68999998753  3322100 00000      000112222      578899 999999988


Q ss_pred             EecCC-C-----eEEEEECC-ccc
Q psy10662        204 AANSQ-G-----IIKIYVIP-IRV  220 (221)
Q Consensus       204 ~~~~d-g-----~i~iw~~~-~~~  220 (221)
                      +++.+ +     .|.+|++. +++
T Consensus       271 v~~~~~~~~~~~~i~v~~~~~~g~  294 (365)
T 1jof_A          271 ASSRANKFELQGYIAGFKLRDCGS  294 (365)
T ss_dssp             EEEEESSTTSCCEEEEEEECTTSC
T ss_pred             EECCCCCCCCCCeEEEEEECCCCC
Confidence            77643 2     89999985 443

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.85  E-value=2.7e-18  Score=125.95  Aligned_cols=200  Identities=9%  Similarity=0.097  Sum_probs=128.8

Q ss_pred             eEEEEe----CCCeEEEEEecC-CceeeE-EEEeccCceEEEEEecCCcEEEecC---CCcEEEEEcCCCc--cceeeec
Q psy10662          5 HLAFGS----ADHCVHYYDLRN-TKEALA-VFKGHRKAVSYVKFLNKEDIVSAST---DSQLKLWNINKPN--CLRSFVG   73 (221)
Q Consensus         5 ~l~~~~----~dg~i~i~~~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~l~s~~~---d~~v~~wd~~~~~--~~~~~~~   73 (221)
                      .+++|+    .++.|.+|+++. +++... ....+...+..++|+|++.|++++.   ++.|.+|++.+++  .+..+..
T Consensus         4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~   83 (347)
T 3hfq_A            4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA   83 (347)
T ss_dssp             EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred             EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeec
Confidence            455553    356788888873 333322 2334567788999999776766654   6899999997665  3334445


Q ss_pred             cccceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEE-eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         74 HINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYR-FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      +...+..++|+|+++++++++ .++.|.+|++........+. .........  .......+.+++|+|+|+++++...+
T Consensus        84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~spdg~l~v~~~~~  161 (347)
T 3hfq_A           84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPR--PEQDGSHIHYTDLTPDNRLAVIDLGS  161 (347)
T ss_dssp             ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSS--TTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred             CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCC--ccccCCCceEEEECCCCcEEEEeCCC
Confidence            667789999999999887776 78999999986322221110 000000000  00012347889999999977777778


Q ss_pred             CeEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE-ecCCCeEEEEECCc
Q psy10662        152 NSLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA-ANSQGIIKIYVIPI  218 (221)
Q Consensus       152 ~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iw~~~~  218 (221)
                      +.|.+|++.. ++......+..            .....+..++|+|||++|++ ...++.|.+|++..
T Consensus       162 ~~v~~~~~~~~g~~~~~~~~~~------------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~  218 (347)
T 3hfq_A          162 DKVYVYNVSDAGQLSEQSVLTM------------EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT  218 (347)
T ss_dssp             TEEEEEEECTTSCEEEEEEEEC------------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             CEEEEEEECCCCcEEEeeeEEc------------CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence            9999999983 33221111100            11224678999999996666 55789999999873

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.84  E-value=7.7e-20  Score=142.98  Aligned_cols=180  Identities=9%  Similarity=-0.003  Sum_probs=126.3

Q ss_pred             CCCceEEEEeC---CCeEEEEEecC--CceeeEEEEeccCceEEEEEecCC--cEEEecCCCcEEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSA---DHCVHYYDLRN--TKEALAVFKGHRKAVSYVKFLNKE--DIVSASTDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~---dg~i~i~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      || +++++++.   +....+|.+..  .+... .+.. ...+...+|+|++  .+++.+.++.+.+||+.+++...... 
T Consensus        74 pd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-  149 (582)
T 3o4h_A           74 VG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-  149 (582)
T ss_dssp             CS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-
T ss_pred             CC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-
Confidence            45 66777665   45567766653  33322 3322 2234456777643  44555555556699998887654443 


Q ss_pred             cccceeEEEEeCCCCEEEEecCC----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662         74 HINDKNFVGLATDGDYVACGSEN----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                      +..  .+++|+|||+++++++.+    +.|.+||+.+++..              .+..+...+..++|+|||+.|+++.
T Consensus       150 ~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~--------------~l~~~~~~~~~~~~SpDG~~l~~~~  213 (582)
T 3o4h_A          150 LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR--------------VFDSGEGSFSSASISPGMKVTAGLE  213 (582)
T ss_dssp             ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE--------------EECCSSCEEEEEEECTTSCEEEEEE
T ss_pred             CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce--------------EeecCCCccccceECCCCCEEEEcc
Confidence            333  889999999999988776    78999999877653              2355667789999999999999888


Q ss_pred             CCC--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEE--------EcCCCcEEEEecCCCeEEEEEC
Q psy10662        150 ENN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVC--------WRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       150 ~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      .++  .|++||+.+++.. .+.               .|...+..++        |+|||.++++++.|+.+++|++
T Consensus       214 ~~~~~~i~~~d~~~~~~~-~~~---------------~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          214 TAREARLVTVDPRDGSVE-DLE---------------LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID  274 (582)
T ss_dssp             CSSCEEEEEECTTTCCEE-ECC---------------CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             CCCeeEEEEEcCCCCcEE-Ecc---------------CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence            888  8999999877654 221               2333344444        9999998999999999999998

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.84  E-value=3.7e-18  Score=126.22  Aligned_cols=193  Identities=12%  Similarity=0.079  Sum_probs=125.1

Q ss_pred             CCCeEEEEEecCCceeeEEEEe----ccCceEEEEEecCCc-EEEec-CCCcEEEEEcC-CCccc--eeee--cccccee
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKG----HRKAVSYVKFLNKED-IVSAS-TDSQLKLWNIN-KPNCL--RSFV--GHINDKN   79 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~-l~s~~-~d~~v~~wd~~-~~~~~--~~~~--~~~~~v~   79 (221)
                      .+|.+.+|++...++....+..    +...+.+++|+|++. ++++. .++.|++||+. +++..  ..+.  .+...+.
T Consensus       117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~  196 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR  196 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred             CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence            6899999999744554443332    456799999998664 65554 46899999998 66543  2232  2345689


Q ss_pred             EEEEeCCCCEEEEecC-CCeEEEEECC--CCeeeEEEE-eecccceeEeeEEEeeC------ceEEEE-EecCCCEEEEe
Q psy10662         80 FVGLATDGDYVACGSE-NNSLYIYYKG--LSKHMHAYR-FDTVRSMLESSFVGHIN------DKNFVG-LATDGDYVACG  148 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~-d~~v~iwd~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~------~v~~~~-~~~~~~~l~~~  148 (221)
                      .++|+|+|+++++++. ++.|.+|++.  +++...... .....    ..+.++..      .+..++ |+|+|++|+++
T Consensus       197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~  272 (365)
T 1jof_A          197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP----PGIPDRDPETGKGLYRADVCALTFSGKYMFAS  272 (365)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC----TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred             EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC----CCcCCcccccccccccccEEEECCCCCEEEEE
Confidence            9999999998877664 7899999765  444321100 00000    00012222      478899 99999988877


Q ss_pred             cCCC------eEEEEEcC-CCCceeeeeeecccccccccccccccccceeEEEEcC---CCcEEEEecC-CCeEEEEECC
Q psy10662        149 SENN------SLYIYYKG-LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ---LSRVLVAANS-QGIIKIYVIP  217 (221)
Q Consensus       149 ~~d~------~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~-dg~i~iw~~~  217 (221)
                      +.+.      .|.+|++. +++........            ..+...+..++|+|   +|++|++++. ++.|.+|++.
T Consensus       273 ~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~------------~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~  340 (365)
T 1jof_A          273 SRANKFELQGYIAGFKLRDCGSIEKQLFLS------------PTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK  340 (365)
T ss_dssp             EEESSTTSCCEEEEEEECTTSCEEEEEEEE------------ECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred             CCCCCCCCCCeEEEEEECCCCCEEEeeeee------------ecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence            6432      89999986 34322111000            01223456789999   8999999886 5899999986


Q ss_pred             cc
Q psy10662        218 IR  219 (221)
Q Consensus       218 ~~  219 (221)
                      ..
T Consensus       341 ~~  342 (365)
T 1jof_A          341 DE  342 (365)
T ss_dssp             TT
T ss_pred             hh
Confidence            54

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.81  E-value=2e-17  Score=117.55  Aligned_cols=191  Identities=10%  Similarity=0.030  Sum_probs=148.2

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEecc-CceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccc-ccee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-KAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHI-NDKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~   79 (221)
                      .+++|++++.++.|.+||.+ +++.+..+..+. ..+.++.+.|++.++. +.++.|..||. +++.+..+..+. ..+.
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~-tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~   80 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKD-TKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQ   80 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETT-TTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred             CCcEEEeeCCCCEEEEEECC-CCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence            46889999999999999986 788888888765 4788999998777666 56888999998 888888886543 4788


Q ss_pred             EEEEeCCCCEEEEecC-CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         80 FVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ++.+.|+|+++++.+. ++.|..+|. .++.+..+......       ..+......+++.++|+++++...++.|..||
T Consensus        81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~-------~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d  152 (276)
T 3no2_A           81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGI-------ERPHAQFRQINKNKKGNYLVPLFATSEVREIA  152 (276)
T ss_dssp             EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSC-------SSGGGSCSCCEECTTSCEEEEETTTTEEEEEC
T ss_pred             ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC-------CcccccccCceECCCCCEEEEecCCCEEEEEC
Confidence            9999999999998877 778888875 67777665332110       11112344567889999999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .. ++.+..+..                ...+.++.+.++|+++++++.++.|..+|..+|+
T Consensus       153 ~~-G~~~w~~~~----------------~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~  197 (276)
T 3no2_A          153 PN-GQLLNSVKL----------------SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR  197 (276)
T ss_dssp             TT-SCEEEEEEC----------------SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred             CC-CCEEEEEEC----------------CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence            87 877666541                1234567788999999999888899999988765

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.80  E-value=1.4e-17  Score=123.79  Aligned_cols=191  Identities=12%  Similarity=0.004  Sum_probs=132.2

Q ss_pred             CCCceEEEEeC-CC--eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeecccc
Q psy10662          1 MNSCHLAFGSA-DH--CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~-dg--~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      |||++|+.++. +|  .|.+||+. +++.......+...+..++|+|++ .|+.++.++.|++||+.+++....+..+..
T Consensus        45 pDg~~l~~~~~~~g~~~l~~~d~~-~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~  123 (388)
T 3pe7_A           45 RDGSKLLFGGAFDGPWNYYLLDLN-TQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE  123 (388)
T ss_dssp             TTSCEEEEEECTTSSCEEEEEETT-TCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT
T ss_pred             CCCCEEEEEEcCCCCceEEEEeCC-CCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh
Confidence            78999998887 66  48888887 566655555555555577899865 588888889999999999887665555555


Q ss_pred             ceeEEE--EeCCCCEEEE----------------------ecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc
Q psy10662         77 DKNFVG--LATDGDYVAC----------------------GSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND  132 (221)
Q Consensus        77 ~v~~~~--~~~~~~~l~~----------------------~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (221)
                      .+....  ++|++.+++.                      ...+..|.+||+.+++...              +..+...
T Consensus       124 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~--------------l~~~~~~  189 (388)
T 3pe7_A          124 WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV--------------ILQENQW  189 (388)
T ss_dssp             EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE--------------EEEESSC
T ss_pred             cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE--------------eecCCcc
Confidence            444333  4899988763                      2345679999998876432              2345667


Q ss_pred             eEEEEEec-CCCEEEEecCC------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662        133 KNFVGLAT-DGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       133 v~~~~~~~-~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                      +..++|+| +|+.|+....+      ..|.++|...+......             . ......+..++|+|||+.|+..
T Consensus       190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-------------~-~~~~~~~~~~~~spdg~~l~~~  255 (388)
T 3pe7_A          190 LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK-------------T-HAEGESCTHEFWVPDGSALVYV  255 (388)
T ss_dssp             EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC-------------C-CCTTEEEEEEEECTTSSCEEEE
T ss_pred             ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee-------------e-CCCCcccccceECCCCCEEEEE
Confidence            88999999 99988876653      36777776544322111             0 0111357788999999987664


Q ss_pred             cC-C----CeEEEEECCccc
Q psy10662        206 NS-Q----GIIKIYVIPIRV  220 (221)
Q Consensus       206 ~~-d----g~i~iw~~~~~~  220 (221)
                      +. +    ..|.+||+.+++
T Consensus       256 ~~~~~~~~~~l~~~d~~~g~  275 (388)
T 3pe7_A          256 SYLKGSPDRFIYSADPETLE  275 (388)
T ss_dssp             EEETTCCCEEEEEECTTTCC
T ss_pred             ecCCCCCcceEEEEecCCCc
Confidence            43 2    249999998765

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.80  E-value=1.6e-18  Score=139.13  Aligned_cols=204  Identities=9%  Similarity=0.107  Sum_probs=132.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCc-----eEEEEEecCCc-EEEecCC---------CcEEEEEcCCC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKA-----VSYVKFLNKED-IVSASTD---------SQLKLWNINKP   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~-l~s~~~d---------~~v~~wd~~~~   65 (221)
                      ||+++++++  ||.|++||+. +++....+..|...     ...+.|+|++. |+.++.+         +.+.+||+.++
T Consensus        26 ~dg~~~~~~--~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~  102 (740)
T 4a5s_A           26 SDHEYLYKQ--ENNILVFNAE-YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR  102 (740)
T ss_dssp             SSSEEEEEE--TTEEEEEETT-TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred             CCCcEEEEc--CCcEEEEECC-CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC
Confidence            688888886  8999999998 66666667766543     23478898655 6666655         56779999988


Q ss_pred             ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEee---------CceEEE
Q psy10662         66 NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHI---------NDKNFV  136 (221)
Q Consensus        66 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~  136 (221)
                      +... +..+...+...+|+|||+.||.+ .++.|.+||+.+++..+.- .+....   ..+.++.         .....+
T Consensus       103 ~~~~-l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt-~~g~~~---~~~~g~~~~v~~ee~~~~~~~~  176 (740)
T 4a5s_A          103 QLIT-EERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRIT-WTGKED---IIYNGITDWVYEEEVFSAYSAL  176 (740)
T ss_dssp             EECC-SSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECC-SCCBTT---TEEESBCCHHHHHHTSSSSBCE
T ss_pred             cEEE-cccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEc-CCCCcc---ceecCcccccccchhcCCCcce
Confidence            7654 55677789999999999999888 4678999999887653211 110000   0111222         122358


Q ss_pred             EEecCCCEEEEecCCCe-EEEE-----------------------------------EcCC---CCceeeeeeecccccc
Q psy10662        137 GLATDGDYVACGSENNS-LYIY-----------------------------------YKGL---SKHMHAYRFDTVRSML  177 (221)
Q Consensus       137 ~~~~~~~~l~~~~~d~~-i~~~-----------------------------------d~~~---~~~~~~~~~~~~~~~~  177 (221)
                      .|||||+.|+..+.|.. +.+|                                   |+.+   ++.......       
T Consensus       177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l-------  249 (740)
T 4a5s_A          177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI-------  249 (740)
T ss_dssp             EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE-------
T ss_pred             EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe-------
Confidence            99999999988764432 4444                                   4433   211000000       


Q ss_pred             cccccccccccceeEEEEcCCCcEEEEec----CCCeEEEEECCccc
Q psy10662        178 ERDRNEDDTNEFVSAVCWRQLSRVLVAAN----SQGIIKIYVIPIRV  220 (221)
Q Consensus       178 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~iw~~~~~~  220 (221)
                      .......++...+..++|+|||++++...    .+..|.+||+.+++
T Consensus       250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~  296 (740)
T 4a5s_A          250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS  296 (740)
T ss_dssp             CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred             cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence            00000113667789999999999766553    34479999988764

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.80  E-value=1.6e-19  Score=144.32  Aligned_cols=198  Identities=10%  Similarity=0.058  Sum_probs=126.1

Q ss_pred             CCCceEEEEeC---------CCeEEEEEecCCceee--EEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccc
Q psy10662          1 MNSCHLAFGSA---------DHCVHYYDLRNTKEAL--AVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCL   68 (221)
Q Consensus         1 ~~~~~l~~~~~---------dg~i~i~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~   68 (221)
                      |||++|++++.         ++.|++||+. +++.+  ..+   ...+..++|+|++. |+.+ .++.|++||+.+++..
T Consensus        69 pDg~~la~~~~~~~~~~~s~~~~i~~~d~~-~g~~~~~~~l---~~~~~~~~~SPDG~~la~~-~~~~i~~~~~~~g~~~  143 (719)
T 1z68_A           69 PDRQFVYLESDYSKLWRYSYTATYYIYDLS-NGEFVRGNEL---PRPIQYLCWSPVGSKLAYV-YQNNIYLKQRPGDPPF  143 (719)
T ss_dssp             TTSSEEEEEEEEEECSSSCEEEEEEEEETT-TTEECCSSCC---CSSBCCEEECSSTTCEEEE-ETTEEEEESSTTSCCE
T ss_pred             CCCCeEEEEecCceeEEeecceEEEEEECC-CCccccceec---CcccccceECCCCCEEEEE-ECCeEEEEeCCCCCcE
Confidence            79999999876         7899999998 55542  222   35688999999765 5555 5889999999887765


Q ss_pred             eee-eccccce-----------------eEEEEeCCCCEEEEecCCC---------------------------------
Q psy10662         69 RSF-VGHINDK-----------------NFVGLATDGDYVACGSENN---------------------------------   97 (221)
Q Consensus        69 ~~~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~---------------------------------   97 (221)
                      ... .++...+                 .+++|+|||++|++++.|.                                 
T Consensus       144 ~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~  223 (719)
T 1z68_A          144 QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPV  223 (719)
T ss_dssp             ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCE
T ss_pred             EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCe
Confidence            432 2222212                 4899999999999887542                                 


Q ss_pred             -eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC----CeEEEEE----cCCCCceeee
Q psy10662         98 -SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN----NSLYIYY----KGLSKHMHAY  168 (221)
Q Consensus        98 -~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d----~~~~~~~~~~  168 (221)
                       .|.+||+.+++....+....     ...+.++...+..++|+||++++++....    ..|.+||    +.+++....+
T Consensus       224 ~~l~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~  298 (719)
T 1z68_A          224 VRIFIIDTTYPAYVGPQEVPV-----PAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQ  298 (719)
T ss_dssp             EEEEEEESSCHHHHCCEECCC-----CHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred             eEEEEEECCCCCccceeEccC-----CccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEE
Confidence             67788877665320000000     01123456678899999998877764432    3488888    6554432211


Q ss_pred             eeeccccccccccccccccccee-----EEEEcCCCcEEEE--ecCCC--eEEEEECCcc
Q psy10662        169 RFDTVRSMLERDRNEDDTNEFVS-----AVCWRQLSRVLVA--ANSQG--IIKIYVIPIR  219 (221)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~--~~~dg--~i~iw~~~~~  219 (221)
                      .           .....|...+.     .+.|+|||+.|+.  ...+|  .|.+|++.++
T Consensus       299 ~-----------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~  347 (719)
T 1z68_A          299 E-----------HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE  347 (719)
T ss_dssp             E-----------EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST
T ss_pred             e-----------cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC
Confidence            0           00013444454     7899999996654  44455  5666776654

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.80  E-value=8e-17  Score=118.85  Aligned_cols=108  Identities=15%  Similarity=0.218  Sum_probs=82.3

Q ss_pred             CCceEEEEe------CCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEec----------CCCcEEEEEcCC
Q psy10662          2 NSCHLAFGS------ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAS----------TDSQLKLWNINK   64 (221)
Q Consensus         2 ~~~~l~~~~------~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~----------~d~~v~~wd~~~   64 (221)
                      +++++.+..      .|+.|.+||.. +++.+..+..+..+  .++|+|++. ++++.          .++.|.+||..+
T Consensus        14 ~~~~~yv~~~~~~~~~d~~v~v~D~~-t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t   90 (361)
T 2oiz_A           14 QENRIYVMDSVFMHLTESRVHVYDYT-NGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK   90 (361)
T ss_dssp             GGGEEEEEECCGGGGGGCEEEEEETT-TCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred             CCCEEEEECCCCCccccCeEEEEECC-CCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence            566666654      36799999987 67777777766555  899998654 55554          367899999998


Q ss_pred             Cccceeeecc------ccceeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEE
Q psy10662         65 PNCLRSFVGH------INDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHA  112 (221)
Q Consensus        65 ~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~  112 (221)
                      .+.+..+...      ......++++|+|++++++..  ++.|.+||+.+++.+..
T Consensus        91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~  146 (361)
T 2oiz_A           91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED  146 (361)
T ss_dssp             CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred             CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence            8888776532      234678999999999887763  68899999999887766

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.80  E-value=2.1e-17  Score=120.52  Aligned_cols=194  Identities=7%  Similarity=0.071  Sum_probs=139.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEE---------eccCceEEEEEec-CCcEEEec--CCCcEEEEEcCCCccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK---------GHRKAVSYVKFLN-KEDIVSAS--TDSQLKLWNINKPNCL   68 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~---------~~~~~i~~~~~~~-~~~l~s~~--~d~~v~~wd~~~~~~~   68 (221)
                      |+|+++++...++.|++|+.......+..+.         .+-.....++++| ++.++.+.  .++.|++|| .+++.+
T Consensus       100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~  178 (329)
T 3fvz_A          100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV  178 (329)
T ss_dssp             TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred             CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence            5788888888899999999762222455552         3344689999998 66655444  589999999 566666


Q ss_pred             eeeec----------cccceeEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662         69 RSFVG----------HINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG  137 (221)
Q Consensus        69 ~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  137 (221)
                      ..+..          +......++++|+ +.++++...++.|++||..+++.+..+..           ..+...+..++
T Consensus       179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~-----------~~~~~~~~~~~  247 (329)
T 3fvz_A          179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH-----------ASFGRNVFAIS  247 (329)
T ss_dssp             EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC-----------TTTTTCEEEEE
T ss_pred             EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec-----------cccCCCcceee
Confidence            65532          2234789999998 77778888899999999988887766421           12334566777


Q ss_pred             Eec------CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662        138 LAT------DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       138 ~~~------~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  211 (221)
                      |+|      +++..++...+..|++||..+++.+..+..            ...+...+..++++|+|.++++...++.|
T Consensus       248 ~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~------------~~~~~~~p~~ia~~~dG~lyvad~~~~~I  315 (329)
T 3fvz_A          248 YIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP------------VRKHFDMPHDIVASEDGTVYIGDAHTNTV  315 (329)
T ss_dssp             EETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC------------SSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred             ecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC------------CCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence            777      444444444566899999988877665521            12345567899999999888888899999


Q ss_pred             EEEECCc
Q psy10662        212 KIYVIPI  218 (221)
Q Consensus       212 ~iw~~~~  218 (221)
                      ++|++..
T Consensus       316 ~~~~~~~  322 (329)
T 3fvz_A          316 WKFTLTE  322 (329)
T ss_dssp             EEEEEEE
T ss_pred             EEEeCCc
Confidence            9999864

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.78  E-value=1.7e-17  Score=131.49  Aligned_cols=198  Identities=9%  Similarity=-0.032  Sum_probs=128.0

Q ss_pred             CCCce-EEEEeC-CCeEEEEEecCCc-eeeEEEEe-----ccCceEEEEEecCC-cEEEecCC----------CcEEEEE
Q psy10662          1 MNSCH-LAFGSA-DHCVHYYDLRNTK-EALAVFKG-----HRKAVSYVKFLNKE-DIVSASTD----------SQLKLWN   61 (221)
Q Consensus         1 ~~~~~-l~~~~~-dg~i~i~~~~~~~-~~~~~~~~-----~~~~i~~~~~~~~~-~l~s~~~d----------~~v~~wd   61 (221)
                      |||+. |+.++. +..|.++++...+ .....+..     |...+..++|+|++ .|++++.+          ..|++||
T Consensus        88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~  167 (662)
T 3azo_A           88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP  167 (662)
T ss_dssp             SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred             cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence            68888 776654 4455555543001 33444544     56678999999865 57777766          5899999


Q ss_pred             cCC------Cccceeee-ccccceeEEEEeCCCCEEEEecCC--------CeEEEEECC-CCe--eeEEEEeecccceeE
Q psy10662         62 INK------PNCLRSFV-GHINDKNFVGLATDGDYVACGSEN--------NSLYIYYKG-LSK--HMHAYRFDTVRSMLE  123 (221)
Q Consensus        62 ~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~iwd~~-~~~--~~~~~~~~~~~~~~~  123 (221)
                      +.+      ++. ..+. .+...+..++|+|||++|+.++.+        ..|.+||+. +++  ....+          
T Consensus       168 ~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l----------  236 (662)
T 3azo_A          168 LDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL----------  236 (662)
T ss_dssp             TTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE----------
T ss_pred             CCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe----------
Confidence            987      443 4444 556678889999999999877644        479999998 452  22221          


Q ss_pred             eeEEEeeCceEEEEEecCCCEEEEecCCC--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE
Q psy10662        124 SSFVGHINDKNFVGLATDGDYVACGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV  201 (221)
Q Consensus       124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  201 (221)
                        ..++...+..++|+|||+++++++.++  .|.+||+.+++........  .....     ..-...+..++|+|++++
T Consensus       237 --~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~--~~~~~-----p~w~~~~~~~~~~~~~~~  307 (662)
T 3azo_A          237 --LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE--EEFAG-----PLWTPGMRWFAPLANGLI  307 (662)
T ss_dssp             --EEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS--SBSSC-----CCCSTTCCSEEECTTSCE
T ss_pred             --CCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc--ccccC-----ccccccCceEeEeCCCEE
Confidence              233457788999999999888888888  5666665454432211100  00000     000111467899999999


Q ss_pred             EEEecCCCeEEEE--ECCcc
Q psy10662        202 LVAANSQGIIKIY--VIPIR  219 (221)
Q Consensus       202 l~~~~~dg~i~iw--~~~~~  219 (221)
                      +++++. +.+++|  ++.++
T Consensus       308 ~~~~~~-~~~~l~~~d~~~~  326 (662)
T 3azo_A          308 AVVHGK-GAAVLGILDPESG  326 (662)
T ss_dssp             EEEEBS-SSCEEEEEETTTT
T ss_pred             EEEEEc-CccEEEEEECCCC
Confidence            999998 999999  55444

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.77  E-value=5.8e-16  Score=110.60  Aligned_cols=189  Identities=12%  Similarity=0.186  Sum_probs=135.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEe------ccCceEEEEEe-cCCcEEEecC--CCcEEEEEcCCCccceee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG------HRKAVSYVKFL-NKEDIVSAST--DSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~------~~~~i~~~~~~-~~~~l~s~~~--d~~v~~wd~~~~~~~~~~   71 (221)
                      |+++++++...++.|.+||..  ++.+..+..      +...+..+++. +++.++.+..  ++.|.+|| .+++.+..+
T Consensus        39 ~~g~l~v~~~~~~~i~~~d~~--g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~  115 (286)
T 1q7f_A           39 AQNDIIVADTNNHRIQIFDKE--GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKF  115 (286)
T ss_dssp             TTCCEEEEEGGGTEEEEECTT--SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEE
T ss_pred             CCCCEEEEECCCCEEEEECCC--CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEe
Confidence            467888888889999999976  444555532      33568999995 6666665553  89999999 566666555


Q ss_pred             e-ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         72 V-GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        72 ~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      . .+...+..++++|+++++++...++.|.+||.. ++.+..+.           ...+...+..++++|+++++++...
T Consensus       116 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~-----------~~~~~~~p~~i~~~~~g~l~v~~~~  183 (286)
T 1q7f_A          116 GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFG-----------CSKHLEFPNGVVVNDKQEIFISDNR  183 (286)
T ss_dssp             CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE-----------CTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred             cCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeC-----------CCCccCCcEEEEECCCCCEEEEECC
Confidence            3 234568899999999988888888999999964 44433321           0122345789999999998888888


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC-eEEEEECCc
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG-IIKIYVIPI  218 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iw~~~~  218 (221)
                      ++.|++||.. ++.+..+.  .           .++...+..++++++|+++++...++ .|.+|+...
T Consensus       184 ~~~i~~~~~~-g~~~~~~~--~-----------~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g  238 (286)
T 1q7f_A          184 AHCVKVFNYE-GQYLRQIG--G-----------EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG  238 (286)
T ss_dssp             GTEEEEEETT-CCEEEEES--C-----------TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred             CCEEEEEcCC-CCEEEEEc--c-----------CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence            9999999974 33322221  0           12234578999999999888888776 999999653

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.77  E-value=2.8e-17  Score=131.87  Aligned_cols=206  Identities=10%  Similarity=0.017  Sum_probs=125.2

Q ss_pred             CCCceEEEEeCC---------CeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCcccee
Q psy10662          1 MNSCHLAFGSAD---------HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRS   70 (221)
Q Consensus         1 ~~~~~l~~~~~d---------g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~   70 (221)
                      |||++|+.++.+         +.+.+||+. +++.. .+..|.+.+...+|+|++. |+.+ .++.|++|++.+++..+.
T Consensus        71 pdg~~l~~~~~~~~~~r~~~~~~~~~~d~~-~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~l  147 (740)
T 4a5s_A           71 PDGQFILLEYNYVKQWRHSYTASYDIYDLN-KRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRI  147 (740)
T ss_dssp             TTSSEEEEEEEEEECSSSCEEEEEEEEETT-TTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEEC
T ss_pred             CCCCEEEEEECCeeeEEEccceEEEEEECC-CCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEE
Confidence            799999998876         567799998 55543 4556778899999999665 5555 678999999988765432


Q ss_pred             e-eccccce-----------------eEEEEeCCCCEEEEecCCCe-EEEEECCC---C-------------------ee
Q psy10662         71 F-VGHINDK-----------------NFVGLATDGDYVACGSENNS-LYIYYKGL---S-------------------KH  109 (221)
Q Consensus        71 ~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~~-v~iwd~~~---~-------------------~~  109 (221)
                      . .++...+                 ..+.|+|||++|+.++.|.. +.+|++..   .                   ..
T Consensus       148 t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~  227 (740)
T 4a5s_A          148 TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPT  227 (740)
T ss_dssp             CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCE
T ss_pred             cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCe
Confidence            1 2222212                 35899999999887754322 44443210   0                   00


Q ss_pred             eEEEEeeccc---ce--eEeeEE------EeeCceEEEEEecCCCEEEEec----CCCeEEEEEcCCCC----ceeeeee
Q psy10662        110 MHAYRFDTVR---SM--LESSFV------GHINDKNFVGLATDGDYVACGS----ENNSLYIYYKGLSK----HMHAYRF  170 (221)
Q Consensus       110 ~~~~~~~~~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~----~d~~i~~~d~~~~~----~~~~~~~  170 (221)
                      ....-++...   ..  ....+.      ++...+..++|+|||+.++...    .+..|.+||+.+++    +......
T Consensus       228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l  307 (740)
T 4a5s_A          228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH  307 (740)
T ss_dssp             EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred             eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEe
Confidence            0011112222   10  011121      2556788999999999666543    33479999998876    1111100


Q ss_pred             eccccccccccccccccccee-----EEEEcCCCcEEE-EecC-C--CeEEEEECCccc
Q psy10662        171 DTVRSMLERDRNEDDTNEFVS-----AVCWRQLSRVLV-AANS-Q--GIIKIYVIPIRV  220 (221)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~-~~~~-d--g~i~iw~~~~~~  220 (221)
                                 ....+...|.     .+.|+|||+.|+ ..+. +  ..|.+|++.+++
T Consensus       308 -----------~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~  355 (740)
T 4a5s_A          308 -----------IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD  355 (740)
T ss_dssp             -----------EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred             -----------eeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence                       0012333333     678999999877 5553 3  468888887654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.76  E-value=5.2e-16  Score=113.13  Aligned_cols=202  Identities=10%  Similarity=0.045  Sum_probs=135.7

Q ss_pred             CCCceEEEEeCC------------------------CeEEEEEecCCceeeEEEE-eccCceEEEEEecCCc-EEEecCC
Q psy10662          1 MNSCHLAFGSAD------------------------HCVHYYDLRNTKEALAVFK-GHRKAVSYVKFLNKED-IVSASTD   54 (221)
Q Consensus         1 ~~~~~l~~~~~d------------------------g~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~-l~s~~~d   54 (221)
                      |+|+++++...+                        +.|.+||.. +++.+..+. .+-.....+++++++. +++...+
T Consensus        33 ~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~  111 (329)
T 3fvz_A           33 SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN-NAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL  111 (329)
T ss_dssp             TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT-TCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT
T ss_pred             CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC-CCeEEeccCCCccCCceEEEECCCCCEEEEECCC
Confidence            578888887776                        479999987 566655544 2345789999997554 5566778


Q ss_pred             CcEEEEEcCCCc-cceee---------eccccceeEEEEeC-CCCEEEEec-CCCeEEEEECCCCeeeEEEEeeccccee
Q psy10662         55 SQLKLWNINKPN-CLRSF---------VGHINDKNFVGLAT-DGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSML  122 (221)
Q Consensus        55 ~~v~~wd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~  122 (221)
                      +.|++||..... .+..+         ..+......++++| ++.++++.+ .++.|++|| ..++.+..+........ 
T Consensus       112 ~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~-  189 (329)
T 3fvz_A          112 HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSS-  189 (329)
T ss_dssp             TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSS-
T ss_pred             CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCC-
Confidence            999999985442 44444         23334678999999 788888886 689999999 45555544311100000 


Q ss_pred             EeeEEEeeCceEEEEEecC-CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC----
Q psy10662        123 ESSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ----  197 (221)
Q Consensus       123 ~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----  197 (221)
                        ...++...+..++++|+ ++++++...++.|++||..+++.+..+..             ..+...+..++|+|    
T Consensus       190 --~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~-------------~~~~~~~~~~~~~pg~~~  254 (329)
T 3fvz_A          190 --PRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH-------------ASFGRNVFAISYIPGFLF  254 (329)
T ss_dssp             --CCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC-------------TTTTTCEEEEEEETTEEE
T ss_pred             --CCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec-------------cccCCCcceeeecCCEEE
Confidence              00112345789999998 77888888899999999987776655531             12344577888888    


Q ss_pred             --CCcEEEEecCCCeEEEEECCccc
Q psy10662        198 --LSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       198 --~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                        +|+..++...+..|++|++.+++
T Consensus       255 ~~~g~~~v~~~~~~~v~~~~~~~g~  279 (329)
T 3fvz_A          255 AVNGKPYFGDQEPVQGFVMNFSSGE  279 (329)
T ss_dssp             EEECCCCTTCSCCCCEEEEETTTCC
T ss_pred             EeCCCEEeccCCCcEEEEEEcCCCe
Confidence              33333333445689999987765

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.76  E-value=7.2e-16  Score=110.09  Aligned_cols=187  Identities=16%  Similarity=0.152  Sum_probs=129.7

Q ss_pred             CCceEEEEeC-CCeEEEEEecCCceeeEEEEe-ccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeee--cccc
Q psy10662          2 NSCHLAFGSA-DHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFV--GHIN   76 (221)
Q Consensus         2 ~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~--~~~~   76 (221)
                      +++++++... ++.|.+||.  .++.+..+.. +...+.++++.+++. +++...++.|.+||.. ++.+..+.  .+..
T Consensus        88 ~g~l~v~~~~~~~~i~~~d~--~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~  164 (286)
T 1q7f_A           88 SGDIIVTERSPTHQIQIYNQ--YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLE  164 (286)
T ss_dssp             TTEEEEEECGGGCEEEEECT--TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCS
T ss_pred             CCeEEEEcCCCCCEEEEECC--CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccC
Confidence            4555655533 789999994  4555555532 345689999998655 4455668899999964 55555443  3345


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-eEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-SLY  155 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~  155 (221)
                      .+..++++|+++++++...++.|.+||.. ++.+..+.           ..++...+..++++|+|+++++...++ .|.
T Consensus       165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~-----------~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~  232 (286)
T 1q7f_A          165 FPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIG-----------GEGITNYPIGVGINSNGEILIADNHNNFNLT  232 (286)
T ss_dssp             SEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEES-----------CTTTSCSEEEEEECTTCCEEEEECSSSCEEE
T ss_pred             CcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEc-----------cCCccCCCcEEEECCCCCEEEEeCCCCEEEE
Confidence            68999999999988888889999999974 34333320           011124678899999999888887776 999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +||. .++.+..+...             .....+.+++++|+|+++++ +.|+.|++|++..
T Consensus       233 ~~~~-~g~~~~~~~~~-------------~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~  280 (286)
T 1q7f_A          233 IFTQ-DGQLISALESK-------------VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ  280 (286)
T ss_dssp             EECT-TSCEEEEEEES-------------SCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred             EECC-CCCEEEEEccc-------------CCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence            9995 34444433211             11224678999999987777 5699999999864

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.74  E-value=3.2e-15  Score=108.94  Aligned_cols=186  Identities=11%  Similarity=-0.002  Sum_probs=135.3

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEec-CCCcEEEEEcCCCccceeeeccc-----c
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAS-TDSQLKLWNINKPNCLRSFVGHI-----N   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~-~d~~v~~wd~~~~~~~~~~~~~~-----~   76 (221)
                      ++++++...++.|.+||.. +++.+..+. .......+++++++.++.+. .++.|.+||..+++....+....     .
T Consensus        54 ~~lyv~~~~~~~v~viD~~-t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~  131 (328)
T 3dsm_A           54 GIGWIVVNNSHVIFAIDIN-TFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG  131 (328)
T ss_dssp             TEEEEEEGGGTEEEEEETT-TCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred             CEEEEEEcCCCEEEEEECc-ccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC
Confidence            4456666667999999998 777777775 45678999998766766655 79999999999988776664332     1


Q ss_pred             ceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC----
Q psy10662         77 DKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN----  151 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----  151 (221)
                      ....+++ .++..+++.. .++.|.++|+.+++.+..+.              .......++++|+|++++++..+    
T Consensus       132 ~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~--------------~g~~p~~i~~~~dG~l~v~~~~~~~~~  196 (328)
T 3dsm_A          132 STEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELT--------------IGIQPTSLVMDKYNKMWTITDGGYEGS  196 (328)
T ss_dssp             BCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEE--------------CSSCBCCCEECTTSEEEEEBCCBCTTC
T ss_pred             CcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE--------------cCCCccceEEcCCCCEEEEECCCccCC
Confidence            4566777 3444444443 48899999999988776541              12234678899999987776654    


Q ss_pred             ------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        152 ------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       152 ------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                            +.|.++|..+.+....+...              .......++|+|+++.|+++..  .|.+||..++++
T Consensus       197 ~~~~~~~~v~~id~~t~~v~~~~~~~--------------~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~  256 (328)
T 3dsm_A          197 PYGYEAPSLYRIDAETFTVEKQFKFK--------------LGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV  256 (328)
T ss_dssp             SSCBCCCEEEEEETTTTEEEEEEECC--------------TTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred             ccccCCceEEEEECCCCeEEEEEecC--------------CCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence                  78999999887765544311              1124688999999999988765  899999987753

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.74  E-value=1.4e-16  Score=126.29  Aligned_cols=187  Identities=12%  Similarity=-0.045  Sum_probs=123.5

Q ss_pred             ceEEEE--eCCCeEEEEEecCCceeeEEEEeccCceE---------EEEEe--cC-Cc-EEEec-CCCcEEEEEcC--CC
Q psy10662          4 CHLAFG--SADHCVHYYDLRNTKEALAVFKGHRKAVS---------YVKFL--NK-ED-IVSAS-TDSQLKLWNIN--KP   65 (221)
Q Consensus         4 ~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~~i~---------~~~~~--~~-~~-l~s~~-~d~~v~~wd~~--~~   65 (221)
                      -.++..  +.++...||... .+.....+..+...+.         ...|+  |+ +. |+.++ .+..|.++++.  ..
T Consensus        36 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~  114 (662)
T 3azo_A           36 VWWVAPRPAEAGRATLVRRR-ADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGG  114 (662)
T ss_dssp             EEEEEEETTTTTEEEEEEEC-TTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTC
T ss_pred             EEEEecCcccCCcEEEEEEC-CCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCC
Confidence            344555  457889999975 3333455655665655         66666  64 44 44443 35667777765  20


Q ss_pred             ccceeeec-----cccceeEEEEeCCCCEEEEecCC----------CeEEEEECCC------CeeeEEEEeecccceeEe
Q psy10662         66 NCLRSFVG-----HINDKNFVGLATDGDYVACGSEN----------NSLYIYYKGL------SKHMHAYRFDTVRSMLES  124 (221)
Q Consensus        66 ~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~v~iwd~~~------~~~~~~~~~~~~~~~~~~  124 (221)
                      .....+..     |...+..++|+|+|+.|++++.+          ..|.+||+.+      ++.. .            
T Consensus       115 ~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~------------  181 (662)
T 3azo_A          115 AVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-E------------  181 (662)
T ss_dssp             CCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-E------------
T ss_pred             CCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-E------------
Confidence            33444544     56678899999999999888876          5799999887      4331 1            


Q ss_pred             eEE-EeeCceEEEEEecCCCEEEEecCC--------CeEEEEEcC-CCC--ceeeeeeecccccccccccccccccceeE
Q psy10662        125 SFV-GHINDKNFVGLATDGDYVACGSEN--------NSLYIYYKG-LSK--HMHAYRFDTVRSMLERDRNEDDTNEFVSA  192 (221)
Q Consensus       125 ~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~d~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  192 (221)
                       +. .+...+..++|+|||++|+..+.+        ..|++||+. ++.  ....+.              .++...+..
T Consensus       182 -l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~--------------~~~~~~~~~  246 (662)
T 3azo_A          182 -LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL--------------GGPEEAIAQ  246 (662)
T ss_dssp             -SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE--------------EETTBCEEE
T ss_pred             -EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC--------------CCCCceEcc
Confidence             12 334566778999999999877754        379999998 452  111111              133567889


Q ss_pred             EEEcCCCcEEEEecCCC--eEEEEECCcc
Q psy10662        193 VCWRQLSRVLVAANSQG--IIKIYVIPIR  219 (221)
Q Consensus       193 ~~~~~~~~~l~~~~~dg--~i~iw~~~~~  219 (221)
                      +.|+|||+++++++.++  .|.+|++.++
T Consensus       247 ~~~spdg~l~~~~~~~~~~~l~~~~~~~~  275 (662)
T 3azo_A          247 AEWAPDGSLIVATDRTGWWNLHRVDPATG  275 (662)
T ss_dssp             EEECTTSCEEEEECTTSSCEEEEECTTTC
T ss_pred             eEECCCCeEEEEECCCCCeEEEEEECCCC
Confidence            99999999888888888  6666666454

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.73  E-value=5e-16  Score=113.65  Aligned_cols=150  Identities=10%  Similarity=0.036  Sum_probs=111.7

Q ss_pred             CCCceEEEEeCC------------CeEEEEEecCC--ceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCc
Q psy10662          1 MNSCHLAFGSAD------------HCVHYYDLRNT--KEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN   66 (221)
Q Consensus         1 ~~~~~l~~~~~d------------g~i~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~   66 (221)
                      |||++|++++.+            +.|.+||+.+.  .+.+..+. +...+.+++|+|++.+++++.  .|.+||+.+++
T Consensus       101 pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~~  177 (349)
T 1jmx_B          101 PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLYVAGP--DIYKMDVKTGK  177 (349)
T ss_dssp             TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEEEESS--SEEEECTTTCC
T ss_pred             CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEEEccC--cEEEEeCCCCc
Confidence            688899988865            89999999731  23334444 445689999998766666543  49999998887


Q ss_pred             cceeeeccc--------------------------------------------------------------------cce
Q psy10662         67 CLRSFVGHI--------------------------------------------------------------------NDK   78 (221)
Q Consensus        67 ~~~~~~~~~--------------------------------------------------------------------~~v   78 (221)
                      .+..+..+.                                                                    ..+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (349)
T 1jmx_B          178 YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY  257 (349)
T ss_dssp             EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred             eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcc
Confidence            665543221                                                                    134


Q ss_pred             eEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         79 NFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        79 ~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      ..++|+| ++++++++  ++.|.+||+.+++.+..+              .....+..++|+|++++|++++.++.|.+|
T Consensus       258 ~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~--------------~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~  321 (349)
T 1jmx_B          258 FTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAA--------------NLDHTYYCVAFDKKGDKLYLGGTFNDLAVF  321 (349)
T ss_dssp             EEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEE--------------ECSSCCCEEEECSSSSCEEEESBSSEEEEE
T ss_pred             eeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEE--------------cCCCCccceEECCCCCEEEEecCCCeEEEE
Confidence            5667789 99988887  889999999998876654              123346789999999988888889999999


Q ss_pred             EcCCCCceeeee
Q psy10662        158 YKGLSKHMHAYR  169 (221)
Q Consensus       158 d~~~~~~~~~~~  169 (221)
                      |+.+.+.+..+.
T Consensus       322 d~~~~~~~~~~~  333 (349)
T 1jmx_B          322 NPDTLEKVKNIK  333 (349)
T ss_dssp             ETTTTEEEEEEE
T ss_pred             eccccceeeeee
Confidence            998887766654

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.73  E-value=8.1e-16  Score=113.30  Aligned_cols=172  Identities=8%  Similarity=-0.027  Sum_probs=123.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc----------eeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK----------EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      ...++++|+.+ .+.+|++..-.          ++.... .+.. |+.++| ++..|+++ .++.|++||+++.......
T Consensus        48 ~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~  122 (388)
T 1xip_A           48 SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTV  122 (388)
T ss_dssp             TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEE
T ss_pred             CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCcc
Confidence            46778888887 45669876221          122233 3666 999999 76777777 8899999999887665566


Q ss_pred             eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         72 VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      ..|..++.++.+.+.  .++++..||.|.+||+..++..                 .+...|++++|+|+|  ++.|..|
T Consensus       123 ~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~-----------------~~~~~Vs~v~WSpkG--~~vg~~d  181 (388)
T 1xip_A          123 TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK-----------------QLAQNVTSFDVTNSQ--LAVLLKD  181 (388)
T ss_dssp             EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE-----------------EEEESEEEEEECSSE--EEEEETT
T ss_pred             ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc-----------------cccCCceEEEEcCCc--eEEEEcC
Confidence            667778888777654  3888899999999999876642                 134579999999999  6788999


Q ss_pred             CeEEEEEcCCCCc--eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662        152 NSLYIYYKGLSKH--MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       152 ~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                      |.+++|+......  ...+...+      .+....+|...|.+++|.+++.++++-
T Consensus       182 g~i~~~~~~~~~~~~k~~I~~Pp------~~~~~~~~~~~V~sI~wl~~~~flv~y  231 (388)
T 1xip_A          182 RSFQSFAWRNGEMEKQFEFSLPS------ELEELPVEEYSPLSVTILSPQDFLAVF  231 (388)
T ss_dssp             SCEEEEEEETTEEEEEEEECCCH------HHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             CcEEEEcCCCccccccceecCCc------ccccccCCCeeEEEEEEecCCeEEEEE
Confidence            9999998766553  22331100      001111367889999999999998873

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.72  E-value=3e-14  Score=103.84  Aligned_cols=195  Identities=12%  Similarity=0.067  Sum_probs=129.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEec-CC----CcEEEEEcCCCccceeee--c
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAS-TD----SQLKLWNINKPNCLRSFV--G   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~-~d----~~v~~wd~~~~~~~~~~~--~   73 (221)
                      |++++++++..++.|.+||.. +++.......+...+.++++++++.++.+. .+    +.|.+||..+++....+.  .
T Consensus        54 ~~g~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~  132 (333)
T 2dg1_A           54 RQGQLFLLDVFEGNIFKINPE-TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS  132 (333)
T ss_dssp             TTSCEEEEETTTCEEEEECTT-TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS
T ss_pred             CCCCEEEEECCCCEEEEEeCC-CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc
Confidence            577877788889999999987 455444443466789999999876655544 44    589999988776543332  2


Q ss_pred             cccceeEEEEeCCCCEEEEecC------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-E
Q psy10662         74 HINDKNFVGLATDGDYVACGSE------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-A  146 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~  146 (221)
                      +...+..++++|+++++++...      .+.|..+|..+++...              +......+..++|+|+++.+ +
T Consensus       133 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~--------------~~~~~~~~~~i~~~~dg~~l~v  198 (333)
T 2dg1_A          133 TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP--------------IIQNISVANGIALSTDEKVLWV  198 (333)
T ss_dssp             SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE--------------EEEEESSEEEEEECTTSSEEEE
T ss_pred             cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE--------------eecCCCcccceEECCCCCEEEE
Confidence            3456899999999988776654      3556666655433321              12233457889999999855 4


Q ss_pred             EecCCCeEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        147 CGSENNSLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       147 ~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +.+.++.|.+||+.+ +.....+...    ..   ....++ ..+..++++++|+++++...++.|.+|+...
T Consensus       199 ~~~~~~~i~~~d~~~~g~~~~~~~~~----~~---~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g  263 (333)
T 2dg1_A          199 TETTANRLHRIALEDDGVTIQPFGAT----IP---YYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG  263 (333)
T ss_dssp             EEGGGTEEEEEEECTTSSSEEEEEEE----EE---EECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred             EeCCCCeEEEEEecCCCcCcccccce----EE---EecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCC
Confidence            455678999999864 3322221100    00   001112 3567899999999888877788999999753

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.72  E-value=4.1e-16  Score=115.90  Aligned_cols=193  Identities=9%  Similarity=-0.003  Sum_probs=126.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEE--ecCCcEEE-----------------------ecCCC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKF--LNKEDIVS-----------------------ASTDS   55 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~l~s-----------------------~~~d~   55 (221)
                      |||+.|+.++.++.|++||+. +++.......+...+....|  +|++.++.                       ...+.
T Consensus        90 pdg~~l~~~~~~~~l~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (388)
T 3pe7_A           90 PDDDALFYVKDGRNLMRVDLA-TLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC  168 (388)
T ss_dssp             TTSSEEEEEETTTEEEEEETT-TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred             CCCCEEEEEeCCCeEEEEECC-CCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence            789999999999999999998 66655566656665655554  56655443                       23457


Q ss_pred             cEEEEEcCCCccceeeeccccceeEEEEeC-CCCEEEEecCC------CeEEEEECCCCeeeEEEEeecccceeEeeEEE
Q psy10662         56 QLKLWNINKPNCLRSFVGHINDKNFVGLAT-DGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG  128 (221)
Q Consensus        56 ~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  128 (221)
                      .|.+||+.+++... +..+...+..+.|+| +++.++....+      ..|.++|...++...              +..
T Consensus       169 ~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~--------------l~~  233 (388)
T 3pe7_A          169 RLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK--------------VKT  233 (388)
T ss_dssp             EEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE--------------SCC
T ss_pred             eEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE--------------eee
Confidence            89999998886543 445667789999999 99988766543      367778876543321              122


Q ss_pred             ee--CceEEEEEecCCCEEEEecC-C----CeEEEEEcCCCCceeeeeeecccccccccccccccc-cceeEEEEcCCCc
Q psy10662        129 HI--NDKNFVGLATDGDYVACGSE-N----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN-EFVSAVCWRQLSR  200 (221)
Q Consensus       129 ~~--~~v~~~~~~~~~~~l~~~~~-d----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~  200 (221)
                      +.  ..+...+|+|+|+.|+..+. +    ..|++||+.+++......+...           .+. .....+.|+|||+
T Consensus       234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-----------~~~~~~~~~~~~spdg~  302 (388)
T 3pe7_A          234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPAC-----------SHLMSNYDGSLMVGDGS  302 (388)
T ss_dssp             CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCE-----------EEEEECTTSSEEEEEEC
T ss_pred             CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCc-----------eeeeecCCCCeEccCCC
Confidence            22  24667889999997765443 2    2399999988765332221100           000 0012247999999


Q ss_pred             EEEEe---------cCCCeEEEEECCccc
Q psy10662        201 VLVAA---------NSQGIIKIYVIPIRV  220 (221)
Q Consensus       201 ~l~~~---------~~dg~i~iw~~~~~~  220 (221)
                      .|+..         ..+..|.+||+.+++
T Consensus       303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~~~  331 (388)
T 3pe7_A          303 DAPVDVQDDSGYKIENDPFLYVFNMKNGT  331 (388)
T ss_dssp             CC------------CCCCEEEEEETTTTE
T ss_pred             cceeEeeeccccccCCCCEEEEEeccCCc
Confidence            88754         456799999998765

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.72  E-value=1.1e-14  Score=104.60  Aligned_cols=184  Identities=10%  Similarity=0.007  Sum_probs=124.2

Q ss_pred             CCCc-eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEec-CCCcEEEEEcCCCccceeeecc----
Q psy10662          1 MNSC-HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAS-TDSQLKLWNINKPNCLRSFVGH----   74 (221)
Q Consensus         1 ~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~-~d~~v~~wd~~~~~~~~~~~~~----   74 (221)
                      |+++ +++++..++.|..|+.. ++  ...+..+...+.++++++++.++.+. .++.|.+||..+++........    
T Consensus        37 ~~g~~l~~~~~~~~~i~~~~~~-~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~  113 (296)
T 3e5z_A           37 PARSAVIFSDVRQNRTWAWSDD-GQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKK  113 (296)
T ss_dssp             GGGTEEEEEEGGGTEEEEEETT-SC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEE
T ss_pred             CCCCEEEEEeCCCCEEEEEECC-CC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCC
Confidence            4676 78888889999999987 44  56666677889999999876655544 4689999999777654332211    


Q ss_pred             ccceeEEEEeCCCCEEEE----ec-------------CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662         75 INDKNFVGLATDGDYVAC----GS-------------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG  137 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~----~~-------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  137 (221)
                      ...+..++++|+|+++++    ++             ..+.|..++.. ++. ..             +..+...+..++
T Consensus       114 ~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~-------------~~~~~~~~~gi~  178 (296)
T 3e5z_A          114 LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SA-------------PIRDRVKPNGLA  178 (296)
T ss_dssp             CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EE-------------EECCCSSEEEEE
T ss_pred             CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EE-------------eecCCCCCccEE
Confidence            234678999999998887    33             13355555544 322 11             233445678899


Q ss_pred             EecCCCEEEEecCCCeEEEEEcC-CCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        138 LATDGDYVACGSENNSLYIYYKG-LSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       138 ~~~~~~~l~~~~~d~~i~~~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      |+|+++.+++.+.++.|.+|++. .+.. .....+ .            .+...+..++++++|+++++.  ++.|.+|+
T Consensus       179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~------------~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~  243 (296)
T 3e5z_A          179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T------------VEPGKTDGLRVDAGGLIWASA--GDGVHVLT  243 (296)
T ss_dssp             ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C------------CSSSCCCSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred             ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e------------CCCCCCCeEEECCCCCEEEEc--CCeEEEEC
Confidence            99999988777888999999987 3332 111111 0            123345678888888866665  67788888


Q ss_pred             CC
Q psy10662        216 IP  217 (221)
Q Consensus       216 ~~  217 (221)
                      ..
T Consensus       244 ~~  245 (296)
T 3e5z_A          244 PD  245 (296)
T ss_dssp             TT
T ss_pred             CC
Confidence            75

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.70  E-value=2.1e-16  Score=117.61  Aligned_cols=190  Identities=8%  Similarity=-0.045  Sum_probs=122.6

Q ss_pred             CCCceEEEEeCC---CeEEEEEecCCceeeEEEEeccCce-EEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662          1 MNSCHLAFGSAD---HCVHYYDLRNTKEALAVFKGHRKAV-SYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      |||++|+.....   ..|.+||+. +++... +..+.... ..+.|+|++ .|+.++.++.|++||+.+++.......+.
T Consensus        45 pdG~~l~~~~~~~g~~~l~~~d~~-~~~~~~-l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~  122 (396)
T 3c5m_A           45 QDGKKLLFAGDFDGNRNYYLLNLE-TQQAVQ-LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDE  122 (396)
T ss_dssp             TTSCEEEEEECTTSSCEEEEEETT-TTEEEE-CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT
T ss_pred             CCCCEEEEEEecCCCceEEEEECC-CCcEEE-eecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccc
Confidence            689988877543   368888887 555433 33333333 347899865 57788888899999998877654444333


Q ss_pred             cceeE-------------------EEEeCCCCEEEEe-----cCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC
Q psy10662         76 NDKNF-------------------VGLATDGDYVACG-----SENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN  131 (221)
Q Consensus        76 ~~v~~-------------------~~~~~~~~~l~~~-----~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (221)
                      .....                   ..|+|+++.++..     ..+..|.+||+.+++....              ..+..
T Consensus       123 ~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~--------------~~~~~  188 (396)
T 3c5m_A          123 EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI--------------HQDTA  188 (396)
T ss_dssp             TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE--------------EEESS
T ss_pred             ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEee--------------ccCCc
Confidence            32222                   3457777765544     3566899999887765322              24556


Q ss_pred             ceEEEEEec-CCCEEEEecCC------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE
Q psy10662        132 DKNFVGLAT-DGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA  204 (221)
Q Consensus       132 ~v~~~~~~~-~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  204 (221)
                      .+..+.|+| +++.|+..+.+      ..|.+||+..++.....             . ......+..++|+|+|++|+.
T Consensus       189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-------------~-~~~~~~~~~~~~spdg~~l~~  254 (396)
T 3c5m_A          189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIK-------------E-HAEGESCTHEFWIPDGSAMAY  254 (396)
T ss_dssp             CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESS-------------C-CCTTEEEEEEEECTTSSCEEE
T ss_pred             ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEee-------------c-cCCCccccceEECCCCCEEEE
Confidence            788899999 78877665543      35778887544321110             0 011235778999999998877


Q ss_pred             ecCC-----CeEEEEECCccc
Q psy10662        205 ANSQ-----GIIKIYVIPIRV  220 (221)
Q Consensus       205 ~~~d-----g~i~iw~~~~~~  220 (221)
                      ++.+     +.|++||+.+++
T Consensus       255 ~~~~~~~~~~~l~~~d~~~g~  275 (396)
T 3c5m_A          255 VSYFKGQTDRVIYKANPETLE  275 (396)
T ss_dssp             EEEETTTCCEEEEEECTTTCC
T ss_pred             EecCCCCccceEEEEECCCCC
Confidence            7543     459999998764

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.70  E-value=6.2e-15  Score=104.28  Aligned_cols=189  Identities=9%  Similarity=-0.022  Sum_probs=130.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEE-eccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK-GHRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      |+++++++.. ++.|.+||.. ... ...+. .....+..+++.+++.++ +...++.|.+|+..+.............+
T Consensus        76 ~~g~l~v~~~-~~~i~~~d~~-~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p  152 (270)
T 1rwi_B           76 GAGTVYVTDF-NNRVVTLAAG-SNN-QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDP  152 (270)
T ss_dssp             TTCCEEEEET-TTEEEEECTT-CSC-CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSC
T ss_pred             CCCCEEEEcC-CCEEEEEeCC-Cce-EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCc
Confidence            4567555554 8899999976 332 22232 223568999999766554 44567899999765544332222233457


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ..++++|+++++++...++.|.+||.........             .......+..++++++|.++++...++.|.+|+
T Consensus       153 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-------------~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~  219 (270)
T 1rwi_B          153 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL-------------PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL  219 (270)
T ss_dssp             CCEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC-------------CCSSCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred             eeEEEeCCCCEEEEECCCCEEEEEecCCCceEee-------------cccCCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence            8899999999878777788999999876543221             011225678899999998888777788999998


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ........ .              ...+...+.+++++++|+++++...++.|+++++...+
T Consensus       220 ~~~~~~~~-~--------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          220 AGSTTSTV-L--------------PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             TTCSCCEE-C--------------CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred             CCCCccee-e--------------ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence            76543211 0              00122457899999999988888899999999998754

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.70  E-value=5.3e-15  Score=108.33  Aligned_cols=176  Identities=15%  Similarity=0.144  Sum_probs=113.1

Q ss_pred             CCCceEEEEeCC---C--eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecC---------------------
Q psy10662          1 MNSCHLAFGSAD---H--CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAST---------------------   53 (221)
Q Consensus         1 ~~~~~l~~~~~d---g--~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~---------------------   53 (221)
                      |||+.|+.++.+   +  .|.+|++. +++...... +.. +..++|+|++ .|+.++.                     
T Consensus        68 pDg~~la~~~~~~~~~~~~l~~~~~~-~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~  144 (347)
T 2gop_A           68 PDGKKIAFMRANEEKKVSEIWVADLE-TLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDL  144 (347)
T ss_dssp             TTSSEEEEEEEETTTTEEEEEEEETT-TTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC----
T ss_pred             CCCCEEEEEEeccCCCcceEEEEECC-CCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCc
Confidence            789999887754   3  47777876 555544444 334 9999999865 4666543                     


Q ss_pred             ------CCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCC-------eEEEEECCCCeeeEEEEeecccc
Q psy10662         54 ------DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENN-------SLYIYYKGLSKHMHAYRFDTVRS  120 (221)
Q Consensus        54 ------d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~v~iwd~~~~~~~~~~~~~~~~~  120 (221)
                            ...|.+||+.+++.+..+.. . .+..+.|+|+| +++++..+.       ...+|.+.+++. ..        
T Consensus       145 ~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~--------  212 (347)
T 2gop_A          145 GFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EK--------  212 (347)
T ss_dssp             -----CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EE--------
T ss_pred             ccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EE--------
Confidence                  25799999988876455544 4 78899999999 777775432       334443333332 11        


Q ss_pred             eeEeeEEEeeCceEEEEEecCCCEEEEecCC--------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeE
Q psy10662        121 MLESSFVGHINDKNFVGLATDGDYVACGSEN--------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSA  192 (221)
Q Consensus       121 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  192 (221)
                           +..+ ..+..+  +|+|+.|+.++.+        ..|.+||  +++... +              ...+...+..
T Consensus       213 -----l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~-l--------------~~~~~~~~~~  267 (347)
T 2gop_A          213 -----MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG-I--------------LDEVDRGVGQ  267 (347)
T ss_dssp             -----EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE-S--------------STTCCSEEEE
T ss_pred             -----eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEe-c--------------cccCCcccCC
Confidence                 1222 334333  9999988877644        3677777  332211 1              1134456775


Q ss_pred             -EEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        193 -VCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       193 -~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                       +.|+ ++ ++++++.++.+++| +.++
T Consensus       268 ~~~~s-dg-~~~~~~~~~~~~l~-~~~g  292 (347)
T 2gop_A          268 AKIKD-GK-VYFTLFEEGSVNLY-IWDG  292 (347)
T ss_dssp             EEEET-TE-EEEEEEETTEEEEE-EESS
T ss_pred             ccEEc-Cc-EEEEEecCCcEEEE-EcCC
Confidence             8899 88 88888889999999 7643

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.69  E-value=1.6e-14  Score=115.52  Aligned_cols=203  Identities=12%  Similarity=0.041  Sum_probs=130.9

Q ss_pred             CCCceEEEEeCCC-----eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCc----------------EE
Q psy10662          1 MNSCHLAFGSADH-----CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQ----------------LK   58 (221)
Q Consensus         1 ~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~----------------v~   58 (221)
                      |||++||.+..++     .|++||+. +++.......+ ..+..++|+|++ .|+.++.++.                |+
T Consensus       134 PDg~~la~~~~~~G~~~~~i~v~d~~-tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~  211 (710)
T 2xdw_A          134 EDGEYFAYGLSASGSDWVTIKFMKVD-GAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY  211 (710)
T ss_dssp             TTSSEEEEEEEETTCSCEEEEEEETT-TTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEE
T ss_pred             CCCCEEEEEEcCCCCceEEEEEEECC-CCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEE
Confidence            7899999776644     89999998 66655432222 236789999864 5777776655                99


Q ss_pred             EEEcCCCccc--eeee--ccccceeEEEEeCCCCEEEEecC-----CCeEEEEECCC------Ce-eeEEEE--------
Q psy10662         59 LWNINKPNCL--RSFV--GHINDKNFVGLATDGDYVACGSE-----NNSLYIYYKGL------SK-HMHAYR--------  114 (221)
Q Consensus        59 ~wd~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~iwd~~~------~~-~~~~~~--------  114 (221)
                      +|++.+++..  ..+.  .+...+..+.|+|+|++|+..+.     +..|.+||+.+      ++ ....+.        
T Consensus       212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~  291 (710)
T 2xdw_A          212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD  291 (710)
T ss_dssp             EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE
T ss_pred             EEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE
Confidence            9999887632  2222  23455788999999998876654     56899999875      32 122221        


Q ss_pred             -e-----------------------ecccce--eEeeEEEeeC--ceEEEEEecCCCEEEEecCCCe--EEEEEcCCCCc
Q psy10662        115 -F-----------------------DTVRSM--LESSFVGHIN--DKNFVGLATDGDYVACGSENNS--LYIYYKGLSKH  164 (221)
Q Consensus       115 -~-----------------------~~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~--i~~~d~~~~~~  164 (221)
                       +                       +.....  ....+..+..  .+..++|++++.++++...++.  |.+|++.+++.
T Consensus       292 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~  371 (710)
T 2xdw_A          292 YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGAL  371 (710)
T ss_dssp             EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCE
T ss_pred             EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCE
Confidence             0                       111110  0122223323  5677888888888888888885  55566655554


Q ss_pred             eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-c---CCCeEEEEECCccc
Q psy10662        165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-N---SQGIIKIYVIPIRV  220 (221)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~dg~i~iw~~~~~~  220 (221)
                      ...+.               .+...+..++++|+++.++.. +   ..+.|..||+.+++
T Consensus       372 ~~~l~---------------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          372 LKIFP---------------LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EEEEC---------------CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EEecC---------------CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            33332               234567889999998766532 2   36799999998765

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.69  E-value=2.2e-14  Score=104.45  Aligned_cols=189  Identities=9%  Similarity=-0.040  Sum_probs=131.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEecc-----CceEEEEEecCCcEEEec--CCCcEEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-----KAVSYVKFLNKEDIVSAS--TDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~l~s~~--~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      |+++++++...++.|.+||.. +++....+....     .....+++ +++.++.+.  .++.|.++|+.+++.+..+..
T Consensus        93 ~~g~lyv~~~~~~~v~~iD~~-t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~  170 (328)
T 3dsm_A           93 SDEKAYVTQIWDYRIFIINPK-TYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI  170 (328)
T ss_dssp             ETTEEEEEEBSCSEEEEEETT-TTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred             CCCeEEEEECCCCeEEEEECC-CCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence            356444444478999999998 677776666433     14567777 556655554  489999999999888777654


Q ss_pred             cccceeEEEEeCCCCEEEEecCC----------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662         74 HINDKNFVGLATDGDYVACGSEN----------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD  143 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  143 (221)
                      . .....+.++|+|++++++..+          +.|.++|..+++....+..            .....+..++|+|+++
T Consensus       171 g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~------------~~g~~p~~la~~~d~~  237 (328)
T 3dsm_A          171 G-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF------------KLGDWPSEVQLNGTRD  237 (328)
T ss_dssp             S-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC------------CTTCCCEEEEECTTSC
T ss_pred             C-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec------------CCCCCceeEEEecCCC
Confidence            3 345788999999977777654          7899999998876654311            1123578899999999


Q ss_pred             EEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEe----cCCCeEEEEECCc
Q psy10662        144 YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAA----NSQGIIKIYVIPI  218 (221)
Q Consensus       144 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~----~~dg~i~iw~~~~  218 (221)
                      .++++..  .|.+||..+++.....             ...........++++| +++++++.    ..++.|.+|+.. 
T Consensus       238 ~lyv~~~--~v~~~d~~t~~~~~~~-------------~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-  301 (328)
T 3dsm_A          238 TLYWINN--DIWRMPVEADRVPVRP-------------FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-  301 (328)
T ss_dssp             EEEEESS--SEEEEETTCSSCCSSC-------------SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-
T ss_pred             EEEEEcc--EEEEEECCCCceeeee-------------eecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-
Confidence            8887765  8999998776542100             0001134578899999 55666665    578999999987 


Q ss_pred             cc
Q psy10662        219 RV  220 (221)
Q Consensus       219 ~~  220 (221)
                      ++
T Consensus       302 g~  303 (328)
T 3dsm_A          302 GK  303 (328)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.68  E-value=6.2e-15  Score=104.25  Aligned_cols=190  Identities=8%  Similarity=-0.036  Sum_probs=126.3

Q ss_pred             CCCceEE-EEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          1 MNSCHLA-FGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         1 ~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      |++++++ +...++.|.+|+.. +.........+...+.++++.+++.++.+..++.|.+||................+.
T Consensus        33 ~~g~l~v~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~  111 (270)
T 1rwi_B           33 SAGNVYVTSEGMYGRVVKLATG-STGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPE  111 (270)
T ss_dssp             TTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEE
T ss_pred             CCCCEEEEccCCCCcEEEecCC-CcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCc
Confidence            4677666 44678899999875 322211112233567889999866666555588999999866543222112235688


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      .+++.|+++++++...++.|.+|+..+......             .......+..++++|+|+++++...++.|.+||.
T Consensus       112 ~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~  178 (270)
T 1rwi_B          112 GLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL-------------PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA  178 (270)
T ss_dssp             EEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC-------------CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred             ceEECCCCCEEEEECCCCEEEEEECCCceeEee-------------ccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence            999999999888877788999997654432211             0112235678999999998887777889999997


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .........               ..+...+..++++++|.++++...++.|.+|+..+.
T Consensus       179 ~~~~~~~~~---------------~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~  223 (270)
T 1rwi_B          179 ESNNQVVLP---------------FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST  223 (270)
T ss_dssp             TTCCEEECC---------------CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred             CCCceEeec---------------ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence            655432110               012245788999999988888778899999998754

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.68  E-value=1e-13  Score=107.59  Aligned_cols=199  Identities=9%  Similarity=0.022  Sum_probs=140.8

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcC--CCccceeeecccccee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNIN--KPNCLRSFVGHINDKN   79 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~--~~~~~~~~~~~~~~v~   79 (221)
                      +.++++...++.|.++|.. +++.+..+.. ...+..+.|+|+ +++++++.|+.|.+||+.  +.+.+..+.... ...
T Consensus       167 ~~~~V~~~~~~~V~viD~~-t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~  243 (567)
T 1qks_A          167 NLFSVTLRDAGQIALIDGS-TYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EAR  243 (567)
T ss_dssp             GEEEEEETTTTEEEEEETT-TCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEE
T ss_pred             ceEEEEeCCCCeEEEEECC-CCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCc
Confidence            4567777788999999998 7778877773 446779999985 457788899999999995  777777775433 457


Q ss_pred             EEEEe----CCCCEEEEecC-CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC-ceEEEEEecCCC-EEEEecCCC
Q psy10662         80 FVGLA----TDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN-DKNFVGLATDGD-YVACGSENN  152 (221)
Q Consensus        80 ~~~~~----~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~-~l~~~~~d~  152 (221)
                      .++|+    |+|++++++.. ++.|.++|..+.+.+..+......   ......|.. .+..+..++++. +++....+|
T Consensus       244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~---~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g  320 (567)
T 1qks_A          244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT---YDEQEYHPEPRVAAILASHYRPEFIVNVKETG  320 (567)
T ss_dssp             EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC---TTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccc---cccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence            89999    69998776654 589999999999888776311000   000011222 566788888755 455566779


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCcccC
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRVL  221 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~l  221 (221)
                      .|.++|....+.+......              .......+.|+|+|++++++. .++.|.++|+.++++
T Consensus       321 ~v~~vd~~~~~~~~v~~i~--------------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl  376 (567)
T 1qks_A          321 KILLVDYTDLNNLKTTEIS--------------AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL  376 (567)
T ss_dssp             EEEEEETTCSSEEEEEEEE--------------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred             eEEEEecCCCccceeeeee--------------ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence            9999998765533222111              122355788999999987665 588999999998764

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.68  E-value=2.2e-15  Score=112.14  Aligned_cols=186  Identities=11%  Similarity=0.004  Sum_probs=122.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEE-------------------EEEecCCc-EEEe-----cCCC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSY-------------------VKFLNKED-IVSA-----STDS   55 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~-l~s~-----~~d~   55 (221)
                      |||+.|+.++.++.|++||+. +++.......+......                   +.|+|++. ++..     ..+.
T Consensus        90 pdg~~l~~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~  168 (396)
T 3c5m_A           90 TDERAFFYVKNELNLMKVDLE-TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTC  168 (396)
T ss_dssp             TTSSEEEEEETTTEEEEEETT-TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCE
T ss_pred             CCCCEEEEEEcCCcEEEEECC-CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcc
Confidence            789999999999999999997 55554444434432222                   23455433 3322     4567


Q ss_pred             cEEEEEcCCCccceeeeccccceeEEEEeC-CCCEEEEecCC------CeEEEEECCCCeeeEEEEeecccceeEeeEEE
Q psy10662         56 QLKLWNINKPNCLRSFVGHINDKNFVGLAT-DGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG  128 (221)
Q Consensus        56 ~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  128 (221)
                      .|.+||+.+++..... .+...+..+.|+| +++.++..+.+      ..|.+||+..++....              ..
T Consensus       169 ~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l--------------~~  233 (396)
T 3c5m_A          169 RLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKI--------------KE  233 (396)
T ss_dssp             EEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEES--------------SC
T ss_pred             eEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEe--------------ec
Confidence            8999999887765443 4667789999999 78766655433      3688888765442211              11


Q ss_pred             e--eCceEEEEEecCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCc
Q psy10662        129 H--INDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSR  200 (221)
Q Consensus       129 ~--~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~  200 (221)
                      +  ...+..++|+|+|+.|+..+.+     +.|++||+.+++......             ..+    .. +.|+| +|+
T Consensus       234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-------------~~~----~~-~~~s~~dg~  295 (396)
T 3c5m_A          234 HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-------------MPP----CS-HLMSNFDGS  295 (396)
T ss_dssp             CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-------------CCS----EE-EEEECSSSS
T ss_pred             cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-------------CCC----CC-CCccCCCCc
Confidence            1  2246778999999987766543     459999988765432211             001    22 88999 999


Q ss_pred             EEEEec----------------CCCeEEEEECCccc
Q psy10662        201 VLVAAN----------------SQGIIKIYVIPIRV  220 (221)
Q Consensus       201 ~l~~~~----------------~dg~i~iw~~~~~~  220 (221)
                      +++.++                .+..|.+||+.+++
T Consensus       296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~  331 (396)
T 3c5m_A          296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS  331 (396)
T ss_dssp             EEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred             eEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence            888754                34789999998765

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.67  E-value=1.7e-14  Score=105.12  Aligned_cols=184  Identities=8%  Similarity=0.059  Sum_probs=125.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      +..++..+.++.++.|.    .+....+..+...+.+++|++++.|+ ++..++.|.+||..+++.......+...+.++
T Consensus        17 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i   92 (333)
T 2dg1_A           17 SNSAVPIISESELQTIT----AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAI   92 (333)
T ss_dssp             GGCSSCCCCGGGSCEEE----CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEE
T ss_pred             ccceeEEeecccCcccc----cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceE
Confidence            34455556677888882    33455666677788999999866655 67788999999998877654443456779999


Q ss_pred             EEeCCCCEEEEecCC----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC------C
Q psy10662         82 GLATDGDYVACGSEN----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE------N  151 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d  151 (221)
                      +++|+++++++...+    +.|.+||..+++....+.           .......+..++++|+|+++++...      .
T Consensus        93 ~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~-----------~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~  161 (333)
T 2dg1_A           93 KIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE-----------DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL  161 (333)
T ss_dssp             EECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC-----------SSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred             EECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc-----------cCccCCcccceEECCCCCEEEEeccccccCCC
Confidence            999999988877666    689999987765432210           0012346888999999988776653      2


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE-EecCCCeEEEEECC
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV-AANSQGIIKIYVIP  217 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~  217 (221)
                      +.|..+|...++... +.               .....+..++|+|+|+.|+ +.+.++.|.+|++.
T Consensus       162 ~~l~~~~~~~~~~~~-~~---------------~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~  212 (333)
T 2dg1_A          162 GGVYYVSPDFRTVTP-II---------------QNISVANGIALSTDEKVLWVTETTANRLHRIALE  212 (333)
T ss_dssp             EEEEEECTTSCCEEE-EE---------------EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             ceEEEEeCCCCEEEE-ee---------------cCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence            456556554333221 10               1122467899999998664 45568899999985

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.64  E-value=1.7e-13  Score=98.32  Aligned_cols=187  Identities=10%  Similarity=0.039  Sum_probs=121.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEec----cCceEEEEEecCCcEEE-----ec-------------CCCcEE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH----RKAVSYVKFLNKEDIVS-----AS-------------TDSQLK   58 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~l~s-----~~-------------~d~~v~   58 (221)
                      |+|+++++...++.|.+||.. +++........    ...+..++++|++.++.     ++             ..+.|.
T Consensus        78 ~dg~l~v~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~  156 (296)
T 3e5z_A           78 KQGHLIACSHGLRRLERQREP-GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVF  156 (296)
T ss_dssp             TTCCEEEEETTTTEEEEECST-TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEE
T ss_pred             CCCcEEEEecCCCeEEEEcCC-CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEE
Confidence            577877777677899999986 44433322221    23467899998766555     33             124555


Q ss_pred             EEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECC-CCee-eEEEEeecccceeEeeEEEeeCceEEE
Q psy10662         59 LWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG-LSKH-MHAYRFDTVRSMLESSFVGHINDKNFV  136 (221)
Q Consensus        59 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~  136 (221)
                      .++.. ++ ...+..+......++|+|+++.+++.+.++.|.+||+. .++. ....           .+..+...+..+
T Consensus       157 ~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~-----------~~~~~~~~p~~i  223 (296)
T 3e5z_A          157 RLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGV-----------HFTVEPGKTDGL  223 (296)
T ss_dssp             EECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEE-----------EECCSSSCCCSE
T ss_pred             EECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCe-----------EeeCCCCCCCeE
Confidence            55544 33 33344455667899999999988878888999999986 3432 1110           011133456679


Q ss_pred             EEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE-cCCCcEEEEecCCCeEEEEE
Q psy10662        137 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW-RQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       137 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~iw~  215 (221)
                      +++++|+++++.  ++.|.+||.. ++.+..+.               .+.. +.+++| +|+++.|++++.++ +.-++
T Consensus       224 ~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~---------------~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~  283 (296)
T 3e5z_A          224 RVDAGGLIWASA--GDGVHVLTPD-GDELGRVL---------------TPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIE  283 (296)
T ss_dssp             EEBTTSCEEEEE--TTEEEEECTT-SCEEEEEE---------------CSSC-CCEEEEESTTSCEEEEEETTE-EEEEE
T ss_pred             EECCCCCEEEEc--CCeEEEECCC-CCEEEEEE---------------CCCC-ceeEEEECCCCCEEEEEcCCe-EEEEE
Confidence            999999876666  7889999975 54444332               2333 788999 58999898887764 55566


Q ss_pred             CCcccC
Q psy10662        216 IPIRVL  221 (221)
Q Consensus       216 ~~~~~l  221 (221)
                      ..+++|
T Consensus       284 ~~~~~~  289 (296)
T 3e5z_A          284 TNVRGL  289 (296)
T ss_dssp             CSCCBC
T ss_pred             cccccc
Confidence            666553

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.62  E-value=2.4e-12  Score=95.25  Aligned_cols=108  Identities=5%  Similarity=-0.150  Sum_probs=78.6

Q ss_pred             CCCceEEEEeC--CC---eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEec----------CCCcEEEEEcCC
Q psy10662          1 MNSCHLAFGSA--DH---CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAS----------TDSQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~~~~~--dg---~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~----------~d~~v~~wd~~~   64 (221)
                      |+++++.+...  .+   .|.+||.. +++.+..+.....+  .++++|++. ++.+.          .++.|.+||..+
T Consensus        30 ~~~~~~yv~~~~~~~~~~~v~v~D~~-t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t  106 (373)
T 2mad_H           30 ADGRRSYINLPAHHSAIIQQWVLDAG-SGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT  106 (373)
T ss_pred             CCCCEEEEeCCcccCCccEEEEEECC-CCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence            46666666653  22   88999998 67777777654444  999998654 55553          367899999998


Q ss_pred             Cccceeeecc-------ccceeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEE
Q psy10662         65 PNCLRSFVGH-------INDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHA  112 (221)
Q Consensus        65 ~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~  112 (221)
                      .+.+..+...       ......+.|+|+|++++++..  ++.|.++| .+++.+..
T Consensus       107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~  162 (373)
T 2mad_H          107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ  162 (373)
T ss_pred             CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence            8877765422       123458999999999887763  57899999 99888777

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.62  E-value=5.8e-14  Score=99.72  Aligned_cols=152  Identities=9%  Similarity=0.028  Sum_probs=116.1

Q ss_pred             ecCCcEEEecCCCcEEEEEcCCCccceeeeccc-cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccce
Q psy10662         43 LNKEDIVSASTDSQLKLWNINKPNCLRSFVGHI-NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM  121 (221)
Q Consensus        43 ~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  121 (221)
                      +|++.|++++.++.|.+||.++++.+..+..+. ..+.++.+.|+|++++  +.++.|..||. +++.+..+..      
T Consensus         3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~------   73 (276)
T 3no2_A            3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA------   73 (276)
T ss_dssp             CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC------
T ss_pred             CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC------
Confidence            477889999999999999999999998887665 4689999999999888  34678999998 7887766521      


Q ss_pred             eEeeEEEeeCceEEEEEecCCCEEEEecC-CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662        122 LESSFVGHINDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR  200 (221)
Q Consensus       122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  200 (221)
                            +....+.++.+.|+|+++++.+. ++.+..+|. +++.+..+......         ..+......+++.++|+
T Consensus        74 ------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~---------~~~~~~~~~v~~~~~G~  137 (276)
T 3no2_A           74 ------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGI---------ERPHAQFRQINKNKKGN  137 (276)
T ss_dssp             ------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSC---------SSGGGSCSCCEECTTSC
T ss_pred             ------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC---------CcccccccCceECCCCC
Confidence                  11235678889999999998877 778888875 66666555432210         11222345667899999


Q ss_pred             EEEEecCCCeEEEEECCccc
Q psy10662        201 VLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       201 ~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++++...++.|..||.. |+
T Consensus       138 ~lv~~~~~~~v~~~d~~-G~  156 (276)
T 3no2_A          138 YLVPLFATSEVREIAPN-GQ  156 (276)
T ss_dssp             EEEEETTTTEEEEECTT-SC
T ss_pred             EEEEecCCCEEEEECCC-CC
Confidence            99999999999999987 54

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.62  E-value=8.7e-14  Score=102.63  Aligned_cols=69  Identities=7%  Similarity=0.004  Sum_probs=50.5

Q ss_pred             CCCceEEEEe----------CCCeEEEEEecCCceeeEEEEec------cCceEEEEEecCC-cEEEecC--CCcEEEEE
Q psy10662          1 MNSCHLAFGS----------ADHCVHYYDLRNTKEALAVFKGH------RKAVSYVKFLNKE-DIVSAST--DSQLKLWN   61 (221)
Q Consensus         1 ~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~-~l~s~~~--d~~v~~wd   61 (221)
                      ||+++|+++.          .++.|.+||.. +.+.+..+...      ......++++|++ +|+++..  ++.|.+||
T Consensus        59 pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~-t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d  137 (361)
T 2oiz_A           59 NDGKKIYTMTTYHERITRGKRSDVVEVWDAD-KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVD  137 (361)
T ss_dssp             TTSSEEEEEEEEETTSSSSCEEEEEEEEETT-TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEE
T ss_pred             CCCCEEEEEEecccccccCCCCCEEEEEECc-CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEE
Confidence            6888888886          36789999987 67777777643      2456788999865 4665543  68899999


Q ss_pred             cCCCcccee
Q psy10662         62 INKPNCLRS   70 (221)
Q Consensus        62 ~~~~~~~~~   70 (221)
                      +.+++.+..
T Consensus       138 ~~~~~~~~~  146 (361)
T 2oiz_A          138 VAKGDYVED  146 (361)
T ss_dssp             TTTTEEEEE
T ss_pred             CCCCcEEEE
Confidence            987766554

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.60  E-value=4.7e-16  Score=115.01  Aligned_cols=181  Identities=11%  Similarity=0.023  Sum_probs=104.0

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccc-cee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIN-DKN   79 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~-~v~   79 (221)
                      ++..+++++.||.|+.||.. +++.+..+..  +.+.+..+.++ ..+++++.|+.|+.||.++++.+.....+.. .+.
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~-tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~   84 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKR-TGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ   84 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETT-TCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred             eCCEEEEEcCCCEEEEEECC-CCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence            56789999999999999998 7888887775  45554444444 4677778999999999998887655533211 111


Q ss_pred             E-EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         80 F-VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        80 ~-~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      + ..+. .+..+++++.++.+..||.++++.+..+.             .+.    ...++|++..+++++.++.|+.||
T Consensus        85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~-------------~~~----~~~~~p~~~~v~~~~~dg~v~a~d  146 (369)
T 2hz6_A           85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLS-------------SAF----ADSLSPSTSLLYLGRTEYTITMYD  146 (369)
T ss_dssp             TCSCC------CCCCEEEEEEEEECCC---------------------------------------EEEEEEEEEEECCC
T ss_pred             cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEec-------------CCC----cccccccCCEEEEEecCCEEEEEE
Confidence            1 1111 34567888889999999999998876541             111    134466888899999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCC---cEEEEecCCCeEEEEECCccc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS---RVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .++++.+-.+....                 ....+++++.   ..+++++.||.|+.||..+|+
T Consensus       147 ~~tG~~~W~~~~~~-----------------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~  194 (369)
T 2hz6_A          147 TKTRELRWNATYFD-----------------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD  194 (369)
T ss_dssp             SSSSSCCCEEEEEE-----------------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred             CCCCCEEEeEeccc-----------------ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence            99988765544211                 1112223321   456677889999999998875

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.59  E-value=1.8e-12  Score=93.52  Aligned_cols=192  Identities=11%  Similarity=0.044  Sum_probs=125.8

Q ss_pred             CCCceEEE-------EeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCcc
Q psy10662          1 MNSCHLAF-------GSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNC   67 (221)
Q Consensus         1 ~~~~~l~~-------~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~   67 (221)
                      ++++++++       +..++.|.+||.. +++.. .+..     +...+.+++++++ +.++.++..+.|.+||.. ++.
T Consensus        27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~-~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~  103 (314)
T 1pjx_A           27 KNGDFYIVAPEVEVNGKPAGEILRIDLK-TGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTF  103 (314)
T ss_dssp             TTSCEEEEETTCEETTEECCEEEEECTT-TCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCE
T ss_pred             CCCCEEEEEeccccCCCCCCEEEEEeCC-CCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCE
Confidence            46777777       5778899999976 44432 2322     4467899999987 777766666689999987 654


Q ss_pred             cee-eec----cccceeEEEEeCCCCEEEEecCC---------------CeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         68 LRS-FVG----HINDKNFVGLATDGDYVACGSEN---------------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        68 ~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                      ... ...    ....+..++++++++++++...+               +.|..+|.. ++...              +.
T Consensus       104 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~--------------~~  168 (314)
T 1pjx_A          104 EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ--------------VD  168 (314)
T ss_dssp             EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE--------------EE
T ss_pred             EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE--------------ec
Confidence            322 211    12357899999999887776654               567777654 33221              12


Q ss_pred             EeeCceEEEEEe----cCCCEEEE-ecCCCeEEEEEcC-CCCceeeeeeecccccccccccccccc-cceeEEEEcCCCc
Q psy10662        128 GHINDKNFVGLA----TDGDYVAC-GSENNSLYIYYKG-LSKHMHAYRFDTVRSMLERDRNEDDTN-EFVSAVCWRQLSR  200 (221)
Q Consensus       128 ~~~~~v~~~~~~----~~~~~l~~-~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~  200 (221)
                      .+......++++    |+++.+++ ...++.|.+||.. .+.......+          .....+. ..+..++++++|+
T Consensus       169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~----------~~~~~~~~~~p~~i~~d~~G~  238 (314)
T 1pjx_A          169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVW----------GHIPGTHEGGADGMDFDEDNN  238 (314)
T ss_dssp             EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEE----------EECCCCSSCEEEEEEEBTTCC
T ss_pred             cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEE----------EECCCCCCCCCCceEECCCCC
Confidence            333456788999    99976544 4567899999976 2321110000          0111222 4567899999999


Q ss_pred             EEEEecCCCeEEEEECCccc
Q psy10662        201 VLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       201 ~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++++...++.|.+|+..+++
T Consensus       239 l~v~~~~~~~i~~~d~~~g~  258 (314)
T 1pjx_A          239 LLVANWGSSHIEVFGPDGGQ  258 (314)
T ss_dssp             EEEEEETTTEEEEECTTCBS
T ss_pred             EEEEEcCCCEEEEEcCCCCc
Confidence            88887778899999988554

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.59  E-value=7.7e-14  Score=102.85  Aligned_cols=143  Identities=12%  Similarity=0.015  Sum_probs=104.4

Q ss_pred             ceEEEEEec-CCcEEEecCCCcEEEEEcCCCc---------c-ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEEC
Q psy10662         36 AVSYVKFLN-KEDIVSASTDSQLKLWNINKPN---------C-LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  104 (221)
Q Consensus        36 ~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~  104 (221)
                      ++..+++++ .+.+++|+.+ .+++|++...+         . ......+.. |+.++|  ++++|+++ .++.|++||+
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv  113 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL  113 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence            688999997 4557777776 56669975433         1 112224566 999999  88899888 8899999998


Q ss_pred             CCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccc
Q psy10662        105 GLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED  184 (221)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (221)
                      ++......             ...+...+..+.+.+.  .+++++.||.+.+||+..+....                  
T Consensus       114 ~sl~~~~~-------------~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~------------------  160 (388)
T 1xip_A          114 EELSEFRT-------------VTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ------------------  160 (388)
T ss_dssp             SSTTCEEE-------------EEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE------------------
T ss_pred             hhhhccCc-------------cceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc------------------
Confidence            76653322             2344556666666544  38888999999999998765431                  


Q ss_pred             ccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        185 DTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       185 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                       +...|++++|||+|  ++.|..||.+++|+.+++
T Consensus       161 -~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~  192 (388)
T 1xip_A          161 -LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNG  192 (388)
T ss_dssp             -EEESEEEEEECSSE--EEEEETTSCEEEEEEETT
T ss_pred             -ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCc
Confidence             23479999999999  677889999999987654

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.59  E-value=1.8e-12  Score=95.34  Aligned_cols=111  Identities=7%  Similarity=-0.058  Sum_probs=86.2

Q ss_pred             CCCceEEEEeC-----CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEec----------CCCcEEEEEcCC
Q psy10662          1 MNSCHLAFGSA-----DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAS----------TDSQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~----------~d~~v~~wd~~~   64 (221)
                      |+++.+.+...     ++.|.++|.. +.+.+..+.....+ . ++++|++. ++.+.          .++.|.+||..+
T Consensus        42 pd~~~vyV~~~~~~~~~~~V~ViD~~-t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t  118 (386)
T 3sjl_D           42 PDARRVYVNDPAHFAAVTQQFVIDGE-AGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT  118 (386)
T ss_dssp             CCTTEEEEEECGGGCSSEEEEEEETT-TTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred             CCCCEEEEEcCcccCCCCEEEEEECC-CCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence            67888887765     6799999998 78888888866665 4 99998554 55554          367899999999


Q ss_pred             Cccceeeeccc-------cceeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEEEE
Q psy10662         65 PNCLRSFVGHI-------NDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        65 ~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~  114 (221)
                      .+.+..+.-..       .....++|+|+|++++.+..  ++.|.++|+.+++.+.++.
T Consensus       119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~  177 (386)
T 3sjl_D          119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD  177 (386)
T ss_dssp             CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred             CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence            99888774321       24567999999998877653  6899999999998887764

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.59  E-value=2.5e-13  Score=99.45  Aligned_cols=162  Identities=11%  Similarity=0.062  Sum_probs=102.5

Q ss_pred             CeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCC-------cEEEEEcCCCccceeeeccccceeEEEEeC
Q psy10662         13 HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDS-------QLKLWNINKPNCLRSFVGHINDKNFVGLAT   85 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~-------~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~   85 (221)
                      ..|++||+. +++.+..+.. . .+..+.|+|++.++++..++       ...+|.+.+++ ...+..+ ..+..+  +|
T Consensus       152 ~~l~~~d~~-~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--sp  224 (347)
T 2gop_A          152 TTFWIFDTE-SEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DS  224 (347)
T ss_dssp             EEEEEEETT-TTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EE
T ss_pred             ceEEEEECC-CCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CC
Confidence            578899987 5655355554 4 78899999877545554432       34555544443 3344434 444443  99


Q ss_pred             CCCEEEEecCC--------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE-EEEecCCCEEEEecCCCeEEE
Q psy10662         86 DGDYVACGSEN--------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF-VGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        86 ~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      +|++++.++.+        ..|.+||  +++.. .+            ...+...+.. +.|+ ++ ++++++.++.+++
T Consensus       225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l------------~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l  287 (347)
T 2gop_A          225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVM-GI------------LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNL  287 (347)
T ss_dssp             CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE-ES------------STTCCSEEEEEEEET-TE-EEEEEEETTEEEE
T ss_pred             CCCEEEEEEccccCCccccceEEEEC--CCceE-ec------------cccCCcccCCccEEc-Cc-EEEEEecCCcEEE
Confidence            99988766643        3677777  33322 11            1233455665 8899 88 8899999999999


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE-EEEECC
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII-KIYVIP  217 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i-~iw~~~  217 (221)
                      | +.+++.....                .+...|.+++|+|  .++++++.++.. .+|.+.
T Consensus       288 ~-~~~g~~~~~~----------------~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~  330 (347)
T 2gop_A          288 Y-IWDGEIKPIA----------------KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD  330 (347)
T ss_dssp             E-EESSSEEEEE----------------CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred             E-EcCCceEEEe----------------cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence            9 8743321111                2355788999999  677777666654 777664

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.58  E-value=2.6e-12  Score=91.93  Aligned_cols=185  Identities=7%  Similarity=0.002  Sum_probs=126.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEecCCcEEEe-cCCCcEEEEEcCCCccceeee--ccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNKEDIVSA-STDSQLKLWNINKPNCLRSFV--GHI   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~l~s~-~~d~~v~~wd~~~~~~~~~~~--~~~   75 (221)
                      |+|+++++...++.|.+||..  ++ ...+.  .+...+.++++.+++.+..+ ..++.|..||.. ++. ..+.  ...
T Consensus        24 ~~g~l~v~~~~~~~v~~~d~~--~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~   98 (299)
T 2z2n_A           24 DKGKVWITQHKANMISCINLD--GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPD   98 (299)
T ss_dssp             TTSCEEEEETTTTEEEEECTT--CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTT
T ss_pred             CCCCEEEEecCCCcEEEEcCC--CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcC
Confidence            467777766667899999876  22 22222  24567899999886665544 457889999976 332 2222  234


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      ..+..+++.|++.++++...++.|..||. +++... +           ........+..+++++++++.++...++.|.
T Consensus        99 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~-----------~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~  165 (299)
T 2z2n_A           99 SAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-Y-----------ELPNKGSYPSFITLGSDNALWFTENQNNAIG  165 (299)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-E-----------ECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred             CCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-e-----------cCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence            56889999999988888777889999998 443321 1           0111234578899999998888777788999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .||. +++... +..             ......+..++++++|++.++...++.|..|+. ++
T Consensus       166 ~~~~-~g~~~~-~~~-------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g  213 (299)
T 2z2n_A          166 RITE-SGDITE-FKI-------------PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG  213 (299)
T ss_dssp             EECT-TCCEEE-EEC-------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred             EEcC-CCcEEE-eeC-------------CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence            9998 444321 110             012335778999999998777777889999988 44

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.58  E-value=1.1e-13  Score=110.38  Aligned_cols=185  Identities=10%  Similarity=0.057  Sum_probs=118.7

Q ss_pred             CCCceEE-----EEeCCCeEEEEEecCCceeeEEEEeccCce--EEEEEecCC-cEEEecCCCc-------------EEE
Q psy10662          1 MNSCHLA-----FGSADHCVHYYDLRNTKEALAVFKGHRKAV--SYVKFLNKE-DIVSASTDSQ-------------LKL   59 (221)
Q Consensus         1 ~~~~~l~-----~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~-~l~s~~~d~~-------------v~~   59 (221)
                      |||++||     .|+.+..|++||+. +++.+.  ..+...+  ..++|+|++ .|+.++.|..             |++
T Consensus       130 PDG~~la~~~~~~G~~~~~i~v~dl~-tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~  206 (695)
T 2bkl_A          130 WDGKKVAFAQKPNAADEAVLHVIDVD-SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRY  206 (695)
T ss_dssp             TTSSEEEEEEEETTCSCCEEEEEETT-TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEE
T ss_pred             CCCCEEEEEECCCCCceEEEEEEECC-CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEE
Confidence            7899999     45556789999998 555431  1122222  688999865 4777777765             999


Q ss_pred             EEcCCCcc----ceeeeccccceeEEEEeCCCCEEEEecCCC----eEEEEECCCCeeeEEEEeecccceeEeeEEEeeC
Q psy10662         60 WNINKPNC----LRSFVGHINDKNFVGLATDGDYVACGSENN----SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN  131 (221)
Q Consensus        60 wd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (221)
                      |++.+++.    +.....+...+..+.|+|+|++++.++.++    .|.++|..+++.. .             +..+..
T Consensus       207 ~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~-------------l~~~~~  272 (695)
T 2bkl_A          207 HTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-L-------------LVKGVG  272 (695)
T ss_dssp             EETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-E-------------EEECSS
T ss_pred             EECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-E-------------eecCCC
Confidence            99988763    222233445788999999999887776555    5666665444322 1             233344


Q ss_pred             ceEEEEEecCCCEEEEec---CCCeEEEEEcCCCCc--eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        132 DKNFVGLATDGDYVACGS---ENNSLYIYYKGLSKH--MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      .+....+ ++|.+++...   .++.|.+||+.++..  ...+.            . ......+..++|+ ++.++++..
T Consensus       273 ~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~------------~-~~~~~~l~~~~~~-~~~lv~~~~  337 (695)
T 2bkl_A          273 AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV------------P-EDSSASLLSVSIV-GGHLSLEYL  337 (695)
T ss_dssp             CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE------------C-CCSSCEEEEEEEE-TTEEEEEEE
T ss_pred             ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe------------c-CCCCCeEEEEEEE-CCEEEEEEE
Confidence            4455555 5666444443   257899999876542  11111            0 0113457788888 778888888


Q ss_pred             CCCeEEEEECC
Q psy10662        207 SQGIIKIYVIP  217 (221)
Q Consensus       207 ~dg~i~iw~~~  217 (221)
                      .|+..++|.+.
T Consensus       338 ~dg~~~l~~~~  348 (695)
T 2bkl_A          338 KDATSEVRVAT  348 (695)
T ss_dssp             ETTEEEEEEEE
T ss_pred             ECCEEEEEEEe
Confidence            89988888654

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.57  E-value=2.2e-13  Score=108.69  Aligned_cols=191  Identities=8%  Similarity=-0.012  Sum_probs=117.1

Q ss_pred             CCCceEEEEeCCC---eEEEEEecC-CceeeEEEE------eccCceEEEEEecCCc-EE-----EecCCCcEEEEEcCC
Q psy10662          1 MNSCHLAFGSADH---CVHYYDLRN-TKEALAVFK------GHRKAVSYVKFLNKED-IV-----SASTDSQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~~~~~dg---~i~i~~~~~-~~~~~~~~~------~~~~~i~~~~~~~~~~-l~-----s~~~d~~v~~wd~~~   64 (221)
                      |+|.+++....++   .-.+|.... .+.....+.      +|...+.+++|+|++. |+     .|+.+..|++||+.+
T Consensus        77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t  156 (695)
T 2bkl_A           77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS  156 (695)
T ss_dssp             EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred             EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence            4677777666544   344554432 233222222      2344689999998765 44     344467899999999


Q ss_pred             Cccceeeeccccce--eEEEEeCCCCEEEEecCCCe-------------EEEEECCCCeeeEEEEeecccceeEeeEEEe
Q psy10662         65 PNCLRSFVGHINDK--NFVGLATDGDYVACGSENNS-------------LYIYYKGLSKHMHAYRFDTVRSMLESSFVGH  129 (221)
Q Consensus        65 ~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~-------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (221)
                      ++.+..  .+...+  ..++|+|+|+.|+.++.+..             |++|++.+++....         .+.....+
T Consensus       157 g~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~---------lv~~~~~~  225 (695)
T 2bkl_A          157 GEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDT---------VVHERTGD  225 (695)
T ss_dssp             CCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCE---------EEECCCCC
T ss_pred             CCCcCC--cccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhce---------EEEecCCC
Confidence            886511  121222  68999999999998887665             99999987652111         11112234


Q ss_pred             eCceEEEEEecCCCEEEEecCCC----eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662        130 INDKNFVGLATDGDYVACGSENN----SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                      ...+..+.|+|+|++|+..+.++    .|++++..++... .+.               .+...+....+ ++|++++..
T Consensus       226 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~---------------~~~~~~~~~~~-~~g~l~~~s  288 (695)
T 2bkl_A          226 PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLV---------------KGVGAKYEVHA-WKDRFYVLT  288 (695)
T ss_dssp             TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEE---------------ECSSCCEEEEE-ETTEEEEEE
T ss_pred             CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eee---------------cCCCceEEEEe-cCCcEEEEE
Confidence            45678899999999988877665    5666654433221 111               12233445555 566644444


Q ss_pred             c---CCCeEEEEECCcc
Q psy10662        206 N---SQGIIKIYVIPIR  219 (221)
Q Consensus       206 ~---~dg~i~iw~~~~~  219 (221)
                      .   .++.|.+|++.++
T Consensus       289 ~~~~~~~~l~~~d~~~~  305 (695)
T 2bkl_A          289 DEGAPRQRVFEVDPAKP  305 (695)
T ss_dssp             CTTCTTCEEEEEBTTBC
T ss_pred             CCCCCCCEEEEEeCCCC
Confidence            3   2689999998764

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.57  E-value=1.3e-11  Score=88.58  Aligned_cols=192  Identities=13%  Similarity=0.066  Sum_probs=123.0

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec----cccc
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG----HIND   77 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~----~~~~   77 (221)
                      ++.++++...++.|..||.. +++. ..+. ....+.++++++++.++.+. ++.|.+||..+++.......    ....
T Consensus        24 ~~~l~~~d~~~~~i~~~d~~-~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~   99 (297)
T 3g4e_A           24 SNSLLFVDIPAKKVCRWDSF-TKQV-QRVT-MDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNR   99 (297)
T ss_dssp             TTEEEEEETTTTEEEEEETT-TCCE-EEEE-CSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEE
T ss_pred             CCEEEEEECCCCEEEEEECC-CCcE-EEEe-CCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCC
Confidence            35567777778899999987 4433 3333 46789999999877777665 56799999987754332221    1235


Q ss_pred             eeEEEEeCCCCEEEEecCC---------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EE
Q psy10662         78 KNFVGLATDGDYVACGSEN---------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-AC  147 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d---------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~  147 (221)
                      ++.++++|+|+++++....         ..-.+|.+........             ..........++|+|+++.+ ++
T Consensus       100 ~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-------------~~~~~~~pngi~~spdg~~lyv~  166 (297)
T 3g4e_A          100 FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-------------YFDQVDISNGLDWSLDHKIFYYI  166 (297)
T ss_dssp             EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-------------EEEEESBEEEEEECTTSCEEEEE
T ss_pred             CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-------------EeeccccccceEEcCCCCEEEEe
Confidence            7889999999976654321         2234444332111111             12334456789999999866 45


Q ss_pred             ecCCCeEEEEEcC--CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        148 GSENNSLYIYYKG--LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       148 ~~~d~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+.++.|.+|++.  ++.....-.+          .....+...+..++++++|++.++...++.|..|+..+++
T Consensus       167 ~~~~~~i~~~~~d~~~G~~~~~~~~----------~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~  231 (297)
T 3g4e_A          167 DSLSYSVDAFDYDLQTGQISNRRSV----------YKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK  231 (297)
T ss_dssp             EGGGTEEEEEEECTTTCCEEEEEEE----------EECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred             cCCCCcEEEEeccCCCCcccCcEEE----------EECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence            5667899999974  3432111000          0111223456789999999988887778899999998665

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.57  E-value=3.7e-13  Score=108.17  Aligned_cols=203  Identities=14%  Similarity=0.093  Sum_probs=122.6

Q ss_pred             CCCceEEEEeCC-----CeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCc--------------EEEEE
Q psy10662          1 MNSCHLAFGSAD-----HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQ--------------LKLWN   61 (221)
Q Consensus         1 ~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~--------------v~~wd   61 (221)
                      |||++||.+..+     ..|++||+. +++.+.. ..+...+..++|+|++.|+.++.++.              |++|+
T Consensus       172 PDG~~la~~~~~~G~e~~~i~v~dl~-tg~~~~~-~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~  249 (741)
T 1yr2_A          172 DDGRLLAYSVQDGGSDWRTVKFVGVA-DGKPLAD-ELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHR  249 (741)
T ss_dssp             TTSSEEEEEEEETTCSEEEEEEEETT-TCCEEEE-EEEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEE
T ss_pred             CCCCEEEEEEcCCCCceEEEEEEECC-CCCCCCc-cCCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEE
Confidence            799999887654     469999998 5554432 21222346789998855776666543              88999


Q ss_pred             cCCCccc--eeee--ccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCC--eeeEEEE----------------
Q psy10662         62 INKPNCL--RSFV--GHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLS--KHMHAYR----------------  114 (221)
Q Consensus        62 ~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~--~~~~~~~----------------  114 (221)
                      +.++...  ..+.  .+...+..+.|+|+|++++..+.+     ..|.+||+.++  +....+.                
T Consensus       250 lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~  329 (741)
T 1yr2_A          250 LGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQ  329 (741)
T ss_dssp             TTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTE
T ss_pred             CCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCE
Confidence            9776532  2222  223357899999999988776644     38999998765  3022221                


Q ss_pred             ----------------eecccc--eeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC-CCCceeeeeeecccc
Q psy10662        115 ----------------FDTVRS--MLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG-LSKHMHAYRFDTVRS  175 (221)
Q Consensus       115 ----------------~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~  175 (221)
                                      ++....  .....+..+...+..++++ ++.++++...|+..++|.+. .++....+.+     
T Consensus       330 l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-----  403 (741)
T 1yr2_A          330 LWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-----  403 (741)
T ss_dssp             EEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC-----
T ss_pred             EEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC-----
Confidence                            011110  1111111222334456666 55677777888887777554 2222222210     


Q ss_pred             cccccccccccccceeEEEEcCCCcEEE----EecCCCeEEEEECCccc
Q psy10662        176 MLERDRNEDDTNEFVSAVCWRQLSRVLV----AANSQGIIKIYVIPIRV  220 (221)
Q Consensus       176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~----~~~~dg~i~iw~~~~~~  220 (221)
                               .....+..++++|+++.|+    +....+.|++||+.+++
T Consensus       404 ---------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          404 ---------PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             ---------SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             ---------CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence                     1245678899999987665    23346899999998764

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.56  E-value=3.6e-12  Score=95.20  Aligned_cols=111  Identities=7%  Similarity=-0.114  Sum_probs=84.6

Q ss_pred             CCCceEEEEeCC-----CeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEec----------CCCcEEEEEcCC
Q psy10662          1 MNSCHLAFGSAD-----HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAS----------TDSQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~----------~d~~v~~wd~~~   64 (221)
                      |+++.+.+....     +.|.++|.. +.+.+..+..-..+  .++++|++ .++.+.          .++.|.++|..+
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~-t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t  158 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGS-TGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT  158 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETT-TTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECC-CCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence            356666655542     699999998 78888888866666  89999854 455554          467899999999


Q ss_pred             Cccceeeecc-------ccceeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEEEE
Q psy10662         65 PNCLRSFVGH-------INDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        65 ~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~  114 (221)
                      .+.+..+.-.       ......+.|+|+|++++.+..  ++.|.+.|+.+.+.+.++.
T Consensus       159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~  217 (426)
T 3c75_H          159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD  217 (426)
T ss_dssp             CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred             CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence            9888776421       123567899999999887753  5789999999999887764

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.54  E-value=1.4e-11  Score=88.03  Aligned_cols=185  Identities=8%  Similarity=-0.053  Sum_probs=126.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEecCCcEEE-ecCCCcEEEEEcCCCcccee-eecccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNKEDIVS-ASTDSQLKLWNINKPNCLRS-FVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~l~s-~~~d~~v~~wd~~~~~~~~~-~~~~~~   76 (221)
                      +++.++++...++.|..|+.. . + ...+.  .....+.++++.+++.+.. ...++.|..||. +++.... ......
T Consensus        66 ~~g~l~v~~~~~~~i~~~~~~-g-~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~  141 (299)
T 2z2n_A           66 SDGEVWFTENAANKIGRITKK-G-I-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGS  141 (299)
T ss_dssp             TTSCEEEEETTTTEEEEECTT-S-C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTC
T ss_pred             CCCCEEEeCCCCCeEEEECCC-C-c-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCC
Confidence            467777776667889999875 2 2 22232  2345789999998666554 456789999998 5443322 222345


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      .+..+++.+++.++++...++.|..||. +++... +.           .......+..+++++++++.++...++.|..
T Consensus       142 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~-----------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~  208 (299)
T 2z2n_A          142 YPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FK-----------IPTPASGPVGITKGNDDALWFVEIIGNKIGR  208 (299)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EE-----------CSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred             CCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-ee-----------CCCCCCcceeEEECCCCCEEEEccCCceEEE
Confidence            6889999999988887777889999998 554322 10           1122345778999999998777777889999


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ||. ++... .+..             ..+...+.+++++++|+++++...++.|..|+..
T Consensus       209 ~~~-~g~~~-~~~~-------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~  254 (299)
T 2z2n_A          209 ITT-SGEIT-EFKI-------------PTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN  254 (299)
T ss_dssp             ECT-TCCEE-EEEC-------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred             ECC-CCcEE-EEEC-------------CCCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence            998 54422 1210             1233467899999999977776678889999873

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.53  E-value=1.5e-12  Score=104.27  Aligned_cols=159  Identities=13%  Similarity=0.046  Sum_probs=104.8

Q ss_pred             CceEEEEEecCCc-EEEecC-CC----cEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCe----------
Q psy10662         35 KAVSYVKFLNKED-IVSAST-DS----QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNS----------   98 (221)
Q Consensus        35 ~~i~~~~~~~~~~-l~s~~~-d~----~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------   98 (221)
                      ..+..++|+|++. |+.+.. +|    .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.          
T Consensus       125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~  203 (710)
T 2xdw_A          125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS  203 (710)
T ss_dssp             EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred             EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccc
Confidence            3588999998655 554433 22    8999999998876533222 23678999999999988877655          


Q ss_pred             ------EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-----CCeEEEEEcCC------
Q psy10662         99 ------LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-----NNSLYIYYKGL------  161 (221)
Q Consensus        99 ------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~------  161 (221)
                            |.+|++.+++....+         +.....+...+..+.|+|+|++|+..+.     +..|++||+.+      
T Consensus       204 ~~~~~~v~~~~l~t~~~~~~~---------v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~  274 (710)
T 2xdw_A          204 TNLHQKLYYHVLGTDQSEDIL---------CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT  274 (710)
T ss_dssp             CCCCCEEEEEETTSCGGGCEE---------EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC
T ss_pred             cCCCCEEEEEECCCCcccceE---------EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccC
Confidence                  999999876531111         1111123445678999999999887764     56899999876      


Q ss_pred             CC-ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC----CCeEEEEECCcc
Q psy10662        162 SK-HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS----QGIIKIYVIPIR  219 (221)
Q Consensus       162 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~  219 (221)
                      +. ....+.               .+...+.. .|+|+|+.|+..+.    .+.|.+|++.++
T Consensus       275 ~~~~~~~l~---------------~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~  321 (710)
T 2xdw_A          275 GILKWVKLI---------------DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDP  321 (710)
T ss_dssp             SSCCCEEEE---------------CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred             CccceEEee---------------CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence            32 122221               22223333 48888887776654    346999998764

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.53  E-value=7.4e-12  Score=93.80  Aligned_cols=205  Identities=8%  Similarity=0.046  Sum_probs=125.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCC--cEEEEEcCCCccceee----ec
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDS--QLKLWNINKPNCLRSF----VG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~--~v~~wd~~~~~~~~~~----~~   73 (221)
                      |+++++++...++.|++||+. ++........ ..... ++|++++ .|+++..++  .|.+++...+.....+    ..
T Consensus       140 ~~g~lyv~d~~~~~I~~id~~-~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~  216 (409)
T 3hrp_A          140 GNNTVLAYQRDDPRVRLISVD-DNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGST  216 (409)
T ss_dssp             STTEEEEEETTTTEEEEEETT-TTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTT
T ss_pred             CCCCEEEEecCCCcEEEEECC-CCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccch
Confidence            467777777777899999987 5554444433 33344 8999754 567776655  7888887665443333    21


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc-eE-EEEEecC-CCEEEEecC
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND-KN-FVGLATD-GDYVACGSE  150 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~-~~~~~~~-~~~l~~~~~  150 (221)
                      ....+.+++++|++..|+.+..++.|..||..++.....-...         ..+.... .. .++|+|+ +.++++-..
T Consensus       217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~---------~~g~~~~~P~~~ia~~p~~g~lyv~d~~  287 (409)
T 3hrp_A          217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLE---------LSGSLGTNPGPYLIYYFVDSNFYMSDQN  287 (409)
T ss_dssp             SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECC---------CCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred             hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccc---------ccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence            3456789999995455555667889999998866532110000         0111111 12 8999995 666666677


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccc-cccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRS-MLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~  220 (221)
                      ++.|+.|+....  ...+. ..... -...-......-.....++++|+|+++++-+ .++.|+.|++++++
T Consensus       288 ~~~I~~~~~~g~--~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~  356 (409)
T 3hrp_A          288 LSSVYKITPDGE--CEWFC-GSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY  356 (409)
T ss_dssp             TTEEEEECTTCC--EEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred             CCEEEEEecCCC--EEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence            889999986543  11111 10000 0000000001123468899999999888888 89999999977654

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.52  E-value=1.6e-11  Score=92.06  Aligned_cols=213  Identities=8%  Similarity=0.025  Sum_probs=129.2

Q ss_pred             CCCceEEEEeCCC--eEEEEEecCCceeeEEE---Ee-ccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCcccee---
Q psy10662          1 MNSCHLAFGSADH--CVHYYDLRNTKEALAVF---KG-HRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRS---   70 (221)
Q Consensus         1 ~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~---~~-~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~---   70 (221)
                      |+++.|+++..++  .|.+++... ......+   .. ....+.+++++| ++.|+.+..++.|+.||..++.....   
T Consensus       180 ~~g~~l~~~d~~~~~~I~~~d~~~-~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~  258 (409)
T 3hrp_A          180 KDKQRVYSIGWEGTHTVYVYMKAS-GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQL  258 (409)
T ss_dssp             TTSSEEEEEBSSTTCEEEEEEGGG-TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEEC
T ss_pred             cCCCcEEEEecCCCceEEEEEcCC-CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecc
Confidence            4677788877766  788888763 3222333   12 345678999998 77777777789999999987653222   


Q ss_pred             -eeccccce--eEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEeec-ccceeE-eeEEEeeCceEEEEEecCCCE
Q psy10662         71 -FVGHINDK--NFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDT-VRSMLE-SSFVGHINDKNFVGLATDGDY  144 (221)
Q Consensus        71 -~~~~~~~v--~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~v~~~~~~~~~~~  144 (221)
                       ..++...-  ..++|+|+ +.++++-..++.|..|+....  +..+.-.. .....- ......-.....++++|+|++
T Consensus       259 ~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~l  336 (409)
T 3hrp_A          259 ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNF  336 (409)
T ss_dssp             CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCE
T ss_pred             cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCE
Confidence             11222222  28999995 566677777889999987643  22211000 000000 000001234788999999998


Q ss_pred             EEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        145 VACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       145 l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +++-. .++.|+.|++.++....... .....-...-......-.....++++++|.++++-..++.|+.++++
T Consensus       337 yvad~~~~~~I~~~~~~~G~v~~~~g-~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e  409 (409)
T 3hrp_A          337 YIVDGFKGYCLRKLDILDGYVSTVAG-QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE  409 (409)
T ss_dssp             EEEETTTTCEEEEEETTTTEEEEEEE-CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred             EEEeCCCCCEEEEEECCCCEEEEEeC-CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence            88877 88999999976664322111 10000000000001122357899999999988888889999988763

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.50  E-value=1.4e-10  Score=90.14  Aligned_cols=194  Identities=9%  Similarity=-0.045  Sum_probs=131.8

Q ss_pred             CCCceEEEEeCCCeEEEEEec-CCceeeEEEEeccCceEEEEEe----cCC-cEEEe-cCCCcEEEEEcCCCccceeeec
Q psy10662          1 MNSCHLAFGSADHCVHYYDLR-NTKEALAVFKGHRKAVSYVKFL----NKE-DIVSA-STDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~~~i~~~~~~----~~~-~l~s~-~~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      |||+++.+++.|+.|.+||+. .+.+.+..+.. ......++|+    |++ +++++ ..++++.++|..+.+.+..+..
T Consensus       206 pDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~  284 (567)
T 1qks_A          206 ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST  284 (567)
T ss_dssp             TTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred             CCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence            689999999999999999994 24566777764 3346789999    454 45544 4579999999999888776542


Q ss_pred             ----------ccc-ceeEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662         74 ----------HIN-DKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD  141 (221)
Q Consensus        74 ----------~~~-~v~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  141 (221)
                                |.. .+..+..++++.. ++.....|.|.++|....+.+...           . .........+.|+|+
T Consensus       285 ~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~-----------~-i~~~~~~~d~~~~pd  352 (567)
T 1qks_A          285 RGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT-----------E-ISAERFLHDGGLDGS  352 (567)
T ss_dssp             CEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE-----------E-EECCSSEEEEEECTT
T ss_pred             cccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee-----------e-eeccccccCceECCC
Confidence                      112 5778888887664 556677899999998765533221           1 122334667889999


Q ss_pred             CCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEec-CCCeEEEEECCc
Q psy10662        142 GDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAAN-SQGIIKIYVIPI  218 (221)
Q Consensus       142 ~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~iw~~~~  218 (221)
                      +++++++. .++.|.++|+.+++....+...  +        ...|...-..+ ++|++. ..+++. .++.|.+++..+
T Consensus       353 gr~~~va~~~sn~V~ViD~~t~kl~~~i~vg--g--------~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~  421 (567)
T 1qks_A          353 HRYFITAANARNKLVVIDTKEGKLVAIEDTG--G--------QTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP  421 (567)
T ss_dssp             SCEEEEEEGGGTEEEEEETTTTEEEEEEECS--S--------SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred             CCEEEEEeCCCCeEEEEECCCCcEEEEEecc--C--------cCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence            99876655 5789999999988766554310  0        01233211122 578744 444543 478999999876

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.50  E-value=5e-11  Score=85.91  Aligned_cols=188  Identities=6%  Similarity=0.023  Sum_probs=118.2

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEE-EEe----ccCceEEEEEecCCcEEEecC-C---------------CcEEEEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAV-FKG----HRKAVSYVKFLNKEDIVSAST-D---------------SQLKLWN   61 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~-~~~----~~~~i~~~~~~~~~~l~s~~~-d---------------~~v~~wd   61 (221)
                      ++++++. ..+.|.+||..  ++.... ...    ....+.++++.+++.++.+.. +               +.|..||
T Consensus        83 g~l~v~~-~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~  159 (314)
T 1pjx_A           83 NQLFVAD-MRLGLLVVQTD--GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFT  159 (314)
T ss_dssp             SEEEEEE-TTTEEEEEETT--SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEEC
T ss_pred             CcEEEEE-CCCCEEEEeCC--CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEEC
Confidence            5545444 44578888876  332221 111    123578999998766555443 3               4677777


Q ss_pred             cCCCccceeeeccccceeEEEEe----CCCCEE-EEecCCCeEEEEECC-CCeeeEEEEeecccceeEeeEEEee-CceE
Q psy10662         62 INKPNCLRSFVGHINDKNFVGLA----TDGDYV-ACGSENNSLYIYYKG-LSKHMHAYRFDTVRSMLESSFVGHI-NDKN  134 (221)
Q Consensus        62 ~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l-~~~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~  134 (221)
                      .. ++... +..+......++++    |+++.+ ++...++.|.+||+. .++....        .....+..+. ..+.
T Consensus       160 ~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~--------~~~~~~~~~~~~~p~  229 (314)
T 1pjx_A          160 TD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK--------KVWGHIPGTHEGGAD  229 (314)
T ss_dssp             TT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE--------EEEEECCCCSSCEEE
T ss_pred             CC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc--------eEEEECCCCCCCCCC
Confidence            65 44332 32334456889999    998755 455667899999975 3332110        0011112222 4567


Q ss_pred             EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EEecCCCeEEE
Q psy10662        135 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VAANSQGIIKI  213 (221)
Q Consensus       135 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i  213 (221)
                      .++++++|+++++...++.|.+||..+++....+.               .+...+.+++|+|+|+.| ++...++.|..
T Consensus       230 ~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~---------------~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~  294 (314)
T 1pjx_A          230 GMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR---------------CPFEKPSNLHFKPQTKTIFVTEHENNAVWK  294 (314)
T ss_dssp             EEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE---------------CSSSCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             ceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe---------------CCCCCceeEEECCCCCEEEEEeCCCCeEEE
Confidence            89999999988887788899999987665544332               223468899999999955 45556789999


Q ss_pred             EECCc
Q psy10662        214 YVIPI  218 (221)
Q Consensus       214 w~~~~  218 (221)
                      |++..
T Consensus       295 ~~~~~  299 (314)
T 1pjx_A          295 FEWQR  299 (314)
T ss_dssp             EECSS
T ss_pred             EeCCC
Confidence            99874

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.49  E-value=6.2e-11  Score=85.05  Aligned_cols=180  Identities=7%  Similarity=0.004  Sum_probs=112.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEec----cCceEEEEEecCCcEEEecC----------CCcEEEEEcCCCc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH----RKAVSYVKFLNKEDIVSAST----------DSQLKLWNINKPN   66 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~l~s~~~----------d~~v~~wd~~~~~   66 (221)
                      |+|+++++ . ++.|.+||.. +++........    ...+..+++.|++.+..+..          ...-.+|.+....
T Consensus        63 ~dG~l~v~-~-~~~l~~~d~~-~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g  139 (297)
T 3g4e_A           63 QSGGYVAT-I-GTKFCALNWK-EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH  139 (297)
T ss_dssp             TTSSEEEE-E-TTEEEEEETT-TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred             CCCCEEEE-E-CCeEEEEECC-CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence            46774444 3 5678999987 44433222211    23478899998776665542          1234555554322


Q ss_pred             cceeeeccccceeEEEEeCCCCEE-EEecCCCeEEEEEC--CCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662         67 CLRSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYYK--GLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD  143 (221)
Q Consensus        67 ~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  143 (221)
                      ....+.......+.++|+|+++.+ ++.+.++.|.+||+  .+++....        +....+......+..++++++|+
T Consensus       140 ~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~--------~~~~~~~~~~~~p~g~~~d~~G~  211 (297)
T 3g4e_A          140 HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR--------RSVYKLEKEEQIPDGMCIDAEGK  211 (297)
T ss_dssp             CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE--------EEEEECCGGGCEEEEEEEBTTSC
T ss_pred             CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc--------EEEEECCCCCCCCCeeEECCCCC
Confidence            222233344456889999999865 55667789999987  34432111        01111122234577899999998


Q ss_pred             EEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc-CCCcEEEEec
Q psy10662        144 YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR-QLSRVLVAAN  206 (221)
Q Consensus       144 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~  206 (221)
                      +.++...++.|..||..+++.+..+.               .+...+++++|. |+++.|+.++
T Consensus       212 lwva~~~~~~v~~~d~~tG~~~~~i~---------------~p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          212 LWVACYNGGRVIRLDPVTGKRLQTVK---------------LPVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             EEEEEETTTEEEEECTTTCCEEEEEE---------------CSSSBEEEEEEESGGGCEEEEEE
T ss_pred             EEEEEcCCCEEEEEcCCCceEEEEEE---------------CCCCCceEEEEeCCCCCEEEEEc
Confidence            88887778899999998887766654               223468899998 8887766554

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.48  E-value=5e-11  Score=85.24  Aligned_cols=185  Identities=9%  Similarity=-0.033  Sum_probs=124.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeE-EEEeccCceEEEEEecCCcEEEe-cCCCcEEEEEcCCCccce-eeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALA-VFKGHRKAVSYVKFLNKEDIVSA-STDSQLKLWNINKPNCLR-SFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~l~s~-~~d~~v~~wd~~~~~~~~-~~~~~~~~   77 (221)
                      ++|++.++...++.|.+||..  ++... .+..+...+.++++.+++.+..+ ..++.|..||.. ++... ........
T Consensus        29 ~~g~l~v~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~  105 (300)
T 2qc5_A           29 EDGKVWFTQHKANKISSLDQS--GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSG  105 (300)
T ss_dssp             TTSCEEEEETTTTEEEEECTT--SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCC
T ss_pred             CCCCEEEEcCCCCeEEEECCC--CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCC
Confidence            467777776678899999876  22222 22223367899999876665544 447889999987 54422 11223356


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY  157 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~  157 (221)
                      +..+++.+++.++++...++.|..+|.. ++.. .+.           +......+..+++++++++.++...++.|..+
T Consensus       106 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~-----------~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~  172 (300)
T 2qc5_A          106 PYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYD-----------LPNKGSYPAFITLGSDNALWFTENQNNSIGRI  172 (300)
T ss_dssp             EEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEE-----------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred             CccceECCCCCEEEEccCCCeEEEECCC-CCEE-Ecc-----------CCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence            8899999999988887778889999876 4432 110           11123467889999999977777667889999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      |. +++... +..             ..+...+..++++++|++.++....+.|..|+.
T Consensus       173 ~~-~g~~~~-~~~-------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~  216 (300)
T 2qc5_A          173 TN-TGKLEE-YPL-------------PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT  216 (300)
T ss_dssp             CT-TCCEEE-EEC-------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred             CC-CCcEEE-eeC-------------CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence            87 443221 210             112345788999999988877777788999987

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.47  E-value=6.3e-11  Score=84.72  Aligned_cols=187  Identities=10%  Similarity=-0.046  Sum_probs=123.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCcccee-eeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNCLRS-FVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~-~~~~~~~v   78 (221)
                      ++++++++...++.|..||.. .......+......+.++++.+++.+. +...++.|..+|.. ++.... +......+
T Consensus        71 ~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~  148 (300)
T 2qc5_A           71 SLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYP  148 (300)
T ss_dssp             TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE
T ss_pred             CCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCc
Confidence            356666666667889999876 322111222234568999998766655 44457889999987 544322 22234568


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ..+++.++++++++...++.|..+|. +++... +.           .......+..+++++++++.++....+.|.+||
T Consensus       149 ~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~-----------~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~  215 (300)
T 2qc5_A          149 AFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YP-----------LPTNAAAPVGITSGNDGALWFVEIMGNKIGRIT  215 (300)
T ss_dssp             EEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EE-----------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred             eeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-ee-----------CCCCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence            89999999997777777888999987 444321 10           112234578899999998877777778899998


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      . ++.... +..             ......+.+++++++|++.++...++.|..|+..
T Consensus       216 ~-~g~~~~-~~~-------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~  259 (300)
T 2qc5_A          216 T-TGEISE-YDI-------------PTPNARPHAITAGKNSEIWFTEWGANQIGRITND  259 (300)
T ss_dssp             T-TCCEEE-EEC-------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred             C-CCcEEE-EEC-------------CCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence            7 333221 110             1123457889999999977777677889998873

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.47  E-value=2.2e-10  Score=83.29  Aligned_cols=185  Identities=15%  Similarity=0.025  Sum_probs=117.8

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec----cccce
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG----HINDK   78 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~----~~~~v   78 (221)
                      +.++++...++.|..||.. +++. ..+. ....+.+++|.+++.++.++.++ |.+||..+++.......    ....+
T Consensus        61 ~~l~~~d~~~~~i~~~d~~-~~~~-~~~~-~~~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~  136 (326)
T 2ghs_A           61 GTAWWFNILERELHELHLA-SGRK-TVHA-LPFMGSALAKISDSKQLIASDDG-LFLRDTATGVLTLHAELESDLPGNRS  136 (326)
T ss_dssp             TEEEEEEGGGTEEEEEETT-TTEE-EEEE-CSSCEEEEEEEETTEEEEEETTE-EEEEETTTCCEEEEECSSTTCTTEEE
T ss_pred             CEEEEEECCCCEEEEEECC-CCcE-EEEE-CCCcceEEEEeCCCeEEEEECCC-EEEEECCCCcEEEEeeCCCCCCCCCC
Confidence            4566676678899999987 4443 3333 45679999999877766666544 99999887765332211    12358


Q ss_pred             eEEEEeCCCCEEEEecC------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE-ecCC
Q psy10662         79 NFVGLATDGDYVACGSE------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC-GSEN  151 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d  151 (221)
                      ..++++|+|+++++...      .+.|..++  +++.. .             +.........++|+|+++.++. .+.+
T Consensus       137 ~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~-------------~~~~~~~~~~i~~s~dg~~lyv~~~~~  200 (326)
T 2ghs_A          137 NDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-K-------------LFADISIPNSICFSPDGTTGYFVDTKV  200 (326)
T ss_dssp             EEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-E-------------EEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred             CCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-E-------------eeCCCcccCCeEEcCCCCEEEEEECCC
Confidence            89999999997665532      24455555  33321 1             1223345678999999987654 4557


Q ss_pred             CeEEEEEcC--CC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        152 NSLYIYYKG--LS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       152 ~~i~~~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +.|.+||+.  ++ .......+.          ........+..++++++|++.++...++.|..|+..
T Consensus       201 ~~I~~~d~~~~~Gl~~~~~~~~~----------~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~  259 (326)
T 2ghs_A          201 NRLMRVPLDARTGLPTGKAEVFI----------DSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD  259 (326)
T ss_dssp             CEEEEEEBCTTTCCBSSCCEEEE----------ECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred             CEEEEEEcccccCCcccCceEEE----------ECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence            899999986  43 211000000          011122345789999999887777667889999874

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.44  E-value=1.8e-10  Score=82.98  Aligned_cols=143  Identities=11%  Similarity=0.043  Sum_probs=96.3

Q ss_pred             CCCc-eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecC-CCcEEEEEcCCCccceeeecc----
Q psy10662          1 MNSC-HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAST-DSQLKLWNINKPNCLRSFVGH----   74 (221)
Q Consensus         1 ~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~-d~~v~~wd~~~~~~~~~~~~~----   74 (221)
                      |+++ +++++..++.|..|+..  ++ ...+..+...+..+++++++.++++.. ++.|..|+.. ++.. .+..+    
T Consensus        54 ~~g~~l~~~d~~~~~i~~~~~~--g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~-~~~~~~~~~  128 (305)
T 3dr2_A           54 EAQRTLVWSDLVGRRVLGWRED--GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH-LLVGRYAGK  128 (305)
T ss_dssp             GGGTEEEEEETTTTEEEEEETT--SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECEETTE
T ss_pred             CCCCEEEEEECCCCEEEEEeCC--CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE-EEEeccCCC
Confidence            4566 66777778899999874  33 345555677899999998777776654 5789999975 4432 22111    


Q ss_pred             -ccceeEEEEeCCCCEEEE----ecC-------------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEE
Q psy10662         75 -INDKNFVGLATDGDYVAC----GSE-------------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFV  136 (221)
Q Consensus        75 -~~~v~~~~~~~~~~~l~~----~~~-------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  136 (221)
                       ...+..+++.|+|+++++    |..             .+.|..+|..+++...              +. .......+
T Consensus       129 ~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~--------------~~-~~~~p~gl  193 (305)
T 3dr2_A          129 RLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR--------------MA-DLDHPNGL  193 (305)
T ss_dssp             ECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE--------------EE-EESSEEEE
T ss_pred             ccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE--------------Ee-cCCCCcce
Confidence             134678999999998886    332             2456666665544321              11 33456789


Q ss_pred             EEecCCCEEEEecCC------CeEEEEEcCCCC
Q psy10662        137 GLATDGDYVACGSEN------NSLYIYYKGLSK  163 (221)
Q Consensus       137 ~~~~~~~~l~~~~~d------~~i~~~d~~~~~  163 (221)
                      +|+|+++.|+++...      +.|.+|++....
T Consensus       194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~  226 (305)
T 3dr2_A          194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA  226 (305)
T ss_dssp             EECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred             EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence            999999987777655      789999986543

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.41  E-value=2.3e-11  Score=97.83  Aligned_cols=191  Identities=7%  Similarity=-0.058  Sum_probs=113.6

Q ss_pred             CCCceEEEEeCCCe---EEEEEecCC---ceeeEEE-------EeccCceEEEEEecCCc-EEEecC-C----CcEEEEE
Q psy10662          1 MNSCHLAFGSADHC---VHYYDLRNT---KEALAVF-------KGHRKAVSYVKFLNKED-IVSAST-D----SQLKLWN   61 (221)
Q Consensus         1 ~~~~~l~~~~~dg~---i~i~~~~~~---~~~~~~~-------~~~~~~i~~~~~~~~~~-l~s~~~-d----~~v~~wd   61 (221)
                      |||++++....++.   -.+|.....   +.....+       .+|...+..++|+|++. |+.++. +    ..|++||
T Consensus       116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d  195 (741)
T 1yr2_A          116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG  195 (741)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred             EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence            56777776655443   556665422   2222222       12333688999998655 554433 2    3699999


Q ss_pred             cCCCccceeeeccccceeEEEEeCCCCEEEEecCCCe--------------EEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         62 INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNS--------------LYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        62 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                      +.+++.+... .+...+..++|+|+ +.|+.++.++.              |.+|++.+++....+         +....
T Consensus       196 l~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~l---------v~~~~  264 (741)
T 1yr2_A          196 VADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQP---------VFATP  264 (741)
T ss_dssp             TTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEE---------EECCT
T ss_pred             CCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEE---------EeccC
Confidence            9998875432 12223467899999 88887766543              888888765421111         11111


Q ss_pred             EeeCceEEEEEecCCCEEEEecCCC-----eEEEEEcCCC--CceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662        128 GHINDKNFVGLATDGDYVACGSENN-----SLYIYYKGLS--KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR  200 (221)
Q Consensus       128 ~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  200 (221)
                      .+...+..+.|+|||++|+..+.++     .|++||+.++  +....+.               .+...+... ++|+|+
T Consensus       265 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~---------------~~~~~~~~~-~~~dg~  328 (741)
T 1yr2_A          265 ELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI---------------PDLKAQWDF-VDGVGD  328 (741)
T ss_dssp             TCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE---------------CSSSSCEEE-EEEETT
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec---------------CCCCceEEE-EeccCC
Confidence            2223477899999999888777543     8999998765  2012221               122223333 348888


Q ss_pred             EEEEecC----CCeEEEEECCc
Q psy10662        201 VLVAANS----QGIIKIYVIPI  218 (221)
Q Consensus       201 ~l~~~~~----dg~i~iw~~~~  218 (221)
                      .|+..+.    ++.|.+|++.+
T Consensus       329 ~l~~~s~~~~~~~~l~~~d~~~  350 (741)
T 1yr2_A          329 QLWFVSGDGAPLKKIVRVDLSG  350 (741)
T ss_dssp             EEEEEECTTCTTCEEEEEECSS
T ss_pred             EEEEEECCCCCCCEEEEEeCCC
Confidence            8877765    45699999876

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.41  E-value=1.8e-10  Score=85.71  Aligned_cols=202  Identities=8%  Similarity=-0.018  Sum_probs=126.5

Q ss_pred             eEEEEeCCCeEEEEEecCC---ceeeEEEE------ec-cCceEEEEEecCCcEEEecCC------CcEEEEEcCCCccc
Q psy10662          5 HLAFGSADHCVHYYDLRNT---KEALAVFK------GH-RKAVSYVKFLNKEDIVSASTD------SQLKLWNINKPNCL   68 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~---~~~~~~~~------~~-~~~i~~~~~~~~~~l~s~~~d------~~v~~wd~~~~~~~   68 (221)
                      +++.|..++.|+++|+.+.   -+..++++      .. ......+...|++.++++..+      +.+.++|.++.+.+
T Consensus        98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~  177 (462)
T 2ece_A           98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPL  177 (462)
T ss_dssp             EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEE
T ss_pred             EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEE
Confidence            4556777889999998622   14555552      01 123455666787766665544      78999999999988


Q ss_pred             eeeecccc---ceeEEEEeCCCCEEEEec-------------------CCCeEEEEECCCCeeeEEEEeecccceeEeeE
Q psy10662         69 RSFVGHIN---DKNFVGLATDGDYVACGS-------------------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSF  126 (221)
Q Consensus        69 ~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~  126 (221)
                      ..+.....   .-..+.|+|+++.+++..                   ...+|.+||+.+++.+.++....         
T Consensus       178 ~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~---------  248 (462)
T 2ece_A          178 GKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE---------  248 (462)
T ss_dssp             EECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT---------
T ss_pred             EEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC---------
Confidence            87752222   234588899999888874                   36789999999887776652110         


Q ss_pred             EEeeCceEEEEE--ecCCCEEEEecC------CCeEEEEEcCCCCceeeeeeecccc-cccccc----cccccccceeEE
Q psy10662        127 VGHINDKNFVGL--ATDGDYVACGSE------NNSLYIYYKGLSKHMHAYRFDTVRS-MLERDR----NEDDTNEFVSAV  193 (221)
Q Consensus       127 ~~~~~~v~~~~~--~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~v~~~  193 (221)
                        .......+.|  +|+++++.++++      ++.|.+|....+........+.... ....+.    .+.+-......+
T Consensus       249 --~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I  326 (462)
T 2ece_A          249 --ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI  326 (462)
T ss_dssp             --TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred             --CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence              1112334444  999998887774      5688887765432211111111110 000010    011112356889


Q ss_pred             EEcCCCcEEEEecC-CCeEEEEECC
Q psy10662        194 CWRQLSRVLVAANS-QGIIKIYVIP  217 (221)
Q Consensus       194 ~~~~~~~~l~~~~~-dg~i~iw~~~  217 (221)
                      .+|+||++|+++.. .+.|.+|++.
T Consensus       327 ~lS~DGrfLYVSnrg~d~VavfdV~  351 (462)
T 2ece_A          327 DISLDDKFLYLSLWGIGEVRQYDIS  351 (462)
T ss_dssp             EECTTSCEEEEEETTTTEEEEEECS
T ss_pred             EECCCCCEEEEEeCCCCEEEEEEec
Confidence            99999999988774 8899999985

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.41  E-value=4.7e-10  Score=78.47  Aligned_cols=203  Identities=12%  Similarity=0.058  Sum_probs=131.5

Q ss_pred             CCceEEEEeC--CCeEEEEEecCCceeeEEEEeccC-ceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          2 NSCHLAFGSA--DHCVHYYDLRNTKEALAVFKGHRK-AVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      |+.++++.+.  ++.|+++|+. +++.+..+..... ....+++..+..+++.-.++.+.++|..+.+.+..+.....  
T Consensus        31 dg~Lyvstg~~~~s~v~~iD~~-tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--  107 (266)
T 2iwa_A           31 NDTLFESTGLYGRSSVRQVALQ-TGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--  107 (266)
T ss_dssp             TTEEEEEECSTTTCEEEEEETT-TCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--
T ss_pred             CCeEEEECCCCCCCEEEEEECC-CCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--
Confidence            4544554443  5799999998 7777777653222 23456666544455666789999999999988888753212  


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ....++++++.++++..++.|.++|..+.+.+..+.....        ...-..++.+.|. ++...+....++.|.+.|
T Consensus       108 ~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~--------~~p~~~~nele~~-dg~lyvn~~~~~~V~vID  178 (266)
T 2iwa_A          108 DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN--------GHRVIRLNELEYI-NGEVWANIWQTDCIARIS  178 (266)
T ss_dssp             SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET--------TEECCCEEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred             CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC--------CcccccceeEEEE-CCEEEEecCCCCeEEEEE
Confidence            2234566787766666788999999999888776521100        0111235677777 676666665688999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE-EEEecCCCeEEEEECCc
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV-LVAANSQGIIKIYVIPI  218 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iw~~~~  218 (221)
                      ..+++.+..+.+.......  ...........+.++|+|+++. ++++...+.+...++..
T Consensus       179 ~~tg~V~~~I~~~g~~~~~--~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~  237 (266)
T 2iwa_A          179 AKDGTLLGWILLPNLRKKL--IDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL  237 (266)
T ss_dssp             TTTCCEEEEEECHHHHHHH--HHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred             CCCCcEEEEEECCCccccc--ccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence            9999998888753211000  0000011235689999999765 45565688888887754

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.38  E-value=2.1e-10  Score=84.37  Aligned_cols=99  Identities=7%  Similarity=-0.188  Sum_probs=73.6

Q ss_pred             eEEEEeCCC----eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEec----------CCCcEEEEEcCCCccce
Q psy10662          5 HLAFGSADH----CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAS----------TDSQLKLWNINKPNCLR   69 (221)
Q Consensus         5 ~l~~~~~dg----~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~----------~d~~v~~wd~~~~~~~~   69 (221)
                      .+++-..++    .|.++|.. +.+.+.++.....+  .+.++|++ +++.+.          .++.|.+||+.+++.+.
T Consensus        34 ~yV~~~~~~~~~d~vsvID~~-t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~  110 (368)
T 1mda_H           34 SHITLPAYFAGTTENWVSCAG-CGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA  110 (368)
T ss_dssp             EEEEECTTTCSSEEEEEEETT-TTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred             EEEECCccCCccceEEEEECC-CCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence            344444444    88899998 78888888866666  79999854 465554          47899999999999998


Q ss_pred             eeecc-------ccceeEEEEeCCCCEEEEecC--CCeEEE--EECCC
Q psy10662         70 SFVGH-------INDKNFVGLATDGDYVACGSE--NNSLYI--YYKGL  106 (221)
Q Consensus        70 ~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~v~i--wd~~~  106 (221)
                      .+...       ......++++|+|++++++..  +..+.+  +|+.+
T Consensus       111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence            87533       123578999999998887753  467888  88755

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.37  E-value=5.8e-11  Score=86.96  Aligned_cols=212  Identities=8%  Similarity=-0.024  Sum_probs=124.7

Q ss_pred             CCCceEEEEe--CCCeEEEEEecCCceeeEEE-------EeccCceEEEEEecCCcEEEecC------CCcEEEEEcCCC
Q psy10662          1 MNSCHLAFGS--ADHCVHYYDLRNTKEALAVF-------KGHRKAVSYVKFLNKEDIVSAST------DSQLKLWNINKP   65 (221)
Q Consensus         1 ~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~l~s~~~------d~~v~~wd~~~~   65 (221)
                      |+|+++++..  .++.++||.+. .++.. .+       ..+...+..+++.+++.|..+..      ++.|.+||+.++
T Consensus        26 ~~g~~~v~~~~~~~~~~~l~~~~-~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg  103 (343)
T 2qe8_A           26 PDGRLFLSLHQFYQPEMQVAELT-QDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN  103 (343)
T ss_dssp             TTSCEEEEECGGGCCSCSEEEEE-TTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT
T ss_pred             CCCCEEEEeCCCCCCceEEEEEC-CCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC
Confidence            5778887753  23435666665 44422 11       12446799999998777665543      578999999988


Q ss_pred             ccceeeecc------ccceeEEEEeCCCCE-EEEec---CCCeEEEEECCCCeeeEEEEeeccc-c-eeEeeEEE-----
Q psy10662         66 NCLRSFVGH------INDKNFVGLATDGDY-VACGS---ENNSLYIYYKGLSKHMHAYRFDTVR-S-MLESSFVG-----  128 (221)
Q Consensus        66 ~~~~~~~~~------~~~v~~~~~~~~~~~-l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~-~-~~~~~~~~-----  128 (221)
                      +.+..+...      ...+..++++|++.. +++..   .++.|.+||+.+++..+.+.-.... . .......+     
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~  183 (343)
T 2qe8_A          104 QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQI  183 (343)
T ss_dssp             EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBE
T ss_pred             eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEe
Confidence            866655321      234689999986544 45554   6788999999888765543110000 0 00000000     


Q ss_pred             ---------eeCceEEEEEecCCCEEEEecCCC-eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC
Q psy10662        129 ---------HINDKNFVGLATDGDYVACGSENN-SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL  198 (221)
Q Consensus       129 ---------~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  198 (221)
                               -...+..++|+|+++.|+.+..++ .+..++....... .+  . .......+ ...++......++++++
T Consensus       184 ~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~-~~--~-~~~~~~~~-~~~g~~g~pdgia~d~~  258 (343)
T 2qe8_A          184 GQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL-QL--T-DAELGSKI-ERYSEKPICDGISIDKD  258 (343)
T ss_dssp             ECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT-TC--C-HHHHHTTC-EEEEECCSCSCEEECTT
T ss_pred             ccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC-CC--C-hhhhhcce-EecccCCCCceEEECCC
Confidence                     012467899999999888877665 4554443210000 00  0 00000000 00122234567999999


Q ss_pred             CcEEEEecCCCeEEEEECCcc
Q psy10662        199 SRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       199 ~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      |+++++...++.|.+|+..++
T Consensus       259 G~l~va~~~~~~V~~~d~~~G  279 (343)
T 2qe8_A          259 HNIYVGDLAHSAIGVITSADR  279 (343)
T ss_dssp             CCEEEEEGGGTEEEEEETTTT
T ss_pred             CCEEEEccCCCeEEEEECCCC
Confidence            999999989999999998444

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.37  E-value=8.2e-10  Score=76.50  Aligned_cols=190  Identities=11%  Similarity=0.098  Sum_probs=125.8

Q ss_pred             CCceEEEEeCCC--eEEEEEecCCceeeEEEEeccCc-eEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          2 NSCHLAFGSADH--CVHYYDLRNTKEALAVFKGHRKA-VSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         2 ~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      ++.++.+.+.+|  .|+++|+. +++.+..+...... -..++...+..+++.-.++.+.+||..+.+.+.++....   
T Consensus        52 ~~~LyestG~~g~S~v~~vD~~-Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---  127 (262)
T 3nol_A           52 NGYFYESTGLNGRSSIRKVDIE-SGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---  127 (262)
T ss_dssp             TTEEEEEEEETTEEEEEEECTT-TCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---
T ss_pred             CCEEEEECCCCCCceEEEEECC-CCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---
Confidence            355666766766  89999998 78877777643322 233555545445566679999999999999998886422   


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      ....+.++++.|+.+..++.|.++|..+.+.+..+.... .+       ..-..++.+.|. +|+..+..-.+..|.+.|
T Consensus       128 eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~-~g-------~~~~~lNELe~~-~G~lyan~w~~~~I~vID  198 (262)
T 3nol_A          128 EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA-HG-------EELPELNELEWV-DGEIFANVWQTNKIVRID  198 (262)
T ss_dssp             CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEE-TT-------EECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred             CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc-CC-------ccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence            223334567777666668889999999988877752210 00       111334456666 677666665788999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      .++++.+..+++.........   ........+.++|+|+++.|+..+.
T Consensus       199 p~tG~V~~~Id~~~L~~~~~~---~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          199 PETGKVTGIIDLNGILAEAGP---LPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             TTTCBEEEEEECTTGGGGSCS---CCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             CCCCcEEEEEECCcCcccccc---ccCcCCceEEEEEcCCCCEEEEECC
Confidence            999999988876432211110   0112345689999998877777665

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.35  E-value=6.1e-10  Score=82.89  Aligned_cols=204  Identities=9%  Similarity=0.010  Sum_probs=118.5

Q ss_pred             CCCceEEEEeCC------CeEEEEEecCCceeeEEEEeccCc---eEEEEEecCCc-EEEec------------------
Q psy10662          1 MNSCHLAFGSAD------HCVHYYDLRNTKEALAVFKGHRKA---VSYVKFLNKED-IVSAS------------------   52 (221)
Q Consensus         1 ~~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~-l~s~~------------------   52 (221)
                      |+| +++++..+      |.|.++|.. +.+.+..+.....+   -..+.|+|++. +++..                  
T Consensus       147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~-T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~  224 (462)
T 2ece_A          147 PDA-IYISALGNEEGEGPGGILMLDHY-SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKD  224 (462)
T ss_dssp             SSC-EEEEEEEETTSCSCCEEEEECTT-TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHH
T ss_pred             CCe-EEEEcCCCcCCCCCCeEEEEECC-CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhh
Confidence            566 66665555      789999987 77777777633222   34577888655 55542                  


Q ss_pred             -CCCcEEEEEcCCCccceeeecc-c-cceeEEEE--eCCCCEEEEec------CCCeEEEEECCCCeeeEEEEeecccce
Q psy10662         53 -TDSQLKLWNINKPNCLRSFVGH-I-NDKNFVGL--ATDGDYVACGS------ENNSLYIYYKGLSKHMHAYRFDTVRSM  121 (221)
Q Consensus        53 -~d~~v~~wd~~~~~~~~~~~~~-~-~~v~~~~~--~~~~~~l~~~~------~d~~v~iwd~~~~~~~~~~~~~~~~~~  121 (221)
                       .+.+|.+||+.+++.+..+... . .....+.|  +|++++++.++      .++.|.+|....++....-..+.....
T Consensus       225 ~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~  304 (462)
T 2ece_A          225 RYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEP  304 (462)
T ss_dssp             HSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEE
T ss_pred             ccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcc
Confidence             3789999999988777776532 1 23445555  99999876665      466888776654432111111111111


Q ss_pred             eEeeE-------EEeeCceEEEEEecCCCEEEEecC-CCeEEEEEcCCCCceeeeeeeccccccccccccccc--cccee
Q psy10662        122 LESSF-------VGHINDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT--NEFVS  191 (221)
Q Consensus       122 ~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~  191 (221)
                      ....+       .+.......+.++|||++|.++.. .+.|.+||+...........-..+..........+.  .....
T Consensus       305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr  384 (462)
T 2ece_A          305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQ  384 (462)
T ss_dssp             CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred             ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCC
Confidence            00000       011245678999999999987775 679999998643222211111111000000000000  11346


Q ss_pred             EEEEcCCCcEEEEec
Q psy10662        192 AVCWRQLSRVLVAAN  206 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~  206 (221)
                      .++++|||++|+++.
T Consensus       385 ~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          385 MLEISRDGRRVYVTN  399 (462)
T ss_dssp             CEEECTTSSEEEEEC
T ss_pred             EEEEcCCCCEEEEEc
Confidence            799999999999887

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.34  E-value=1.3e-10  Score=92.82  Aligned_cols=185  Identities=14%  Similarity=0.144  Sum_probs=110.8

Q ss_pred             CCCceEEE-----EeCCCeEEEEEecCCceeeEE-EEeccCceEEEEEecCCcEEEecCCC-------------cEEEEE
Q psy10662          1 MNSCHLAF-----GSADHCVHYYDLRNTKEALAV-FKGHRKAVSYVKFLNKEDIVSASTDS-------------QLKLWN   61 (221)
Q Consensus         1 ~~~~~l~~-----~~~dg~i~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~l~s~~~d~-------------~v~~wd   61 (221)
                      |||++||.     |+....|++||+. +++.+.. +...  ....++|++++.|+.++.+.             .|++|+
T Consensus       138 pDg~~lAy~~~~~G~~~~~i~v~dl~-tg~~~~~~~~~~--k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~  214 (693)
T 3iuj_A          138 RDGRILAYSLSLAGSDWREIHLMDVE-SKQPLETPLKDV--KFSGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHR  214 (693)
T ss_dssp             TTSSEEEEEEECSSCCEEEEEEEETT-TCSEEEEEEEEE--ESCCCEEETTTEEEEEESSCCC-------CCCCEEEEEE
T ss_pred             CCCCEEEEEEecCCCceEEEEEEECC-CCCCCccccCCc--eeccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEE
Confidence            78998884     3333579999998 5554332 2211  13567898334477666663             399999


Q ss_pred             cCCCcc----ceeeec-cccceeEEEEeCCCCEEEEec----CCCeEEEEECCCCe-eeEEEEeecccceeEeeEEEeeC
Q psy10662         62 INKPNC----LRSFVG-HINDKNFVGLATDGDYVACGS----ENNSLYIYYKGLSK-HMHAYRFDTVRSMLESSFVGHIN  131 (221)
Q Consensus        62 ~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~----~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  131 (221)
                      +.++..    +..... +......+.|+|+|++++...    ..+.|.++|+.+++ ....             +..+..
T Consensus       215 lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~-------------l~~~~~  281 (693)
T 3iuj_A          215 LGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT-------------VQGDLD  281 (693)
T ss_dssp             TTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE-------------EECSSS
T ss_pred             CCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE-------------EeCCCC
Confidence            977643    222222 344567899999999875432    23589999987653 2222             223333


Q ss_pred             ceEEEEEecCCCEEE-EecCC---CeEEEEEcCCCCce--eeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662        132 DKNFVGLATDGDYVA-CGSEN---NSLYIYYKGLSKHM--HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~-~~~~d---~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                      ..... +++++..|+ ....+   +.|..+|+.++...  ..+.               .+...+.  .|+++++.|+..
T Consensus       282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~---------------~~~~~~~--~~s~~g~~lv~~  343 (693)
T 3iuj_A          282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI---------------PERQQVL--TVHSGSGYLFAE  343 (693)
T ss_dssp             SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE---------------CCCSSCE--EEEEETTEEEEE
T ss_pred             ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe---------------cCCCCEE--EEEEECCEEEEE
Confidence            33333 566665544 44333   67888888765431  1111               2333333  888999888776


Q ss_pred             cC-CC--eEEEEECCcc
Q psy10662        206 NS-QG--IIKIYVIPIR  219 (221)
Q Consensus       206 ~~-dg--~i~iw~~~~~  219 (221)
                      .. ++  .|++|++.++
T Consensus       344 ~~~~g~~~l~~~d~~g~  360 (693)
T 3iuj_A          344 YMVDATARVEQFDYEGK  360 (693)
T ss_dssp             EEETTEEEEEEECTTSC
T ss_pred             EEECCeeEEEEEECCCC
Confidence            65 43  6888888754

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.34  E-value=7.3e-10  Score=76.78  Aligned_cols=189  Identities=7%  Similarity=-0.070  Sum_probs=126.3

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccC-ceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK-AVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      +.++.+.+.+|.|+++|++ +++.+..+ -... .-..+++..+..+++.-.++.+.+||..+.+.+.++... ..-..+
T Consensus        65 ~~Ly~stG~~g~v~~iD~~-Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGL  141 (268)
T 3nok_A           65 GHFFESTGHQGTLRQLSLE-SAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGL  141 (268)
T ss_dssp             TEEEEEETTTTEEEECCSS-CSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCE
T ss_pred             CEEEEEcCCCCEEEEEECC-CCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEE
Confidence            4567777888999999998 67777766 3222 123466665555666778999999999999999888642 222344


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      +  ++++.|+.+..++.|.++|..+.+.+..+.... .       ...-..++.+.|. +|+..+..-.+..|.+.|.++
T Consensus       142 t--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~-~-------g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~T  210 (268)
T 3nok_A          142 C--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL-R-------GQPVELINELECA-NGVIYANIWHSSDVLEIDPAT  210 (268)
T ss_dssp             E--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE-T-------TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTT
T ss_pred             e--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC-C-------CcccccccccEEe-CCEEEEEECCCCeEEEEeCCC
Confidence            4  567777766678899999999998887763211 0       0111234566766 776666555788999999999


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      ++.+..+++.........  .........+.++++|+++.|+..+.
T Consensus       211 G~V~~~Idl~~L~~~~~~--~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          211 GTVVGVIDASALTRAVAG--QVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             CBEEEEEECHHHHHHHTT--TCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             CcEEEEEECCCCcccccc--cccCcCCceEEEEEcCCCCEEEEeCC
Confidence            999998886532111100  01112345789999997666555543

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.31  E-value=1.7e-09  Score=78.65  Aligned_cols=175  Identities=10%  Similarity=0.013  Sum_probs=105.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEec-----cCceEEEEEecCCcEEEecC-------CCcEEEEEcCCCccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH-----RKAVSYVKFLNKEDIVSAST-------DSQLKLWNINKPNCL   68 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~l~s~~~-------d~~v~~wd~~~~~~~   68 (221)
                      |+|+++++. .+ .|.+||.. +++.. .+...     ...+..++++|++.++.++.       .+.|..++  +++..
T Consensus        99 ~dg~l~v~~-~~-gl~~~d~~-~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~  172 (326)
T 2ghs_A           99 SDSKQLIAS-DD-GLFLRDTA-TGVLT-LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT  172 (326)
T ss_dssp             ETTEEEEEE-TT-EEEEEETT-TCCEE-EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE
T ss_pred             CCCeEEEEE-CC-CEEEEECC-CCcEE-EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE
Confidence            356666654 44 48889986 44432 23221     13588999998776665543       24455555  44332


Q ss_pred             eeeeccccceeEEEEeCCCCEE-EEecCCCeEEEEECC--CC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662         69 RSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYYKG--LS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY  144 (221)
Q Consensus        69 ~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  144 (221)
                       .+.........++|+|+++.+ ++.+.++.|.+||+.  ++ +...        ......+......+..++++++|++
T Consensus       173 -~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~--------~~~~~~~~~~~~~p~gi~~d~~G~l  243 (326)
T 2ghs_A          173 -KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK--------AEVFIDSTGIKGGMDGSVCDAEGHI  243 (326)
T ss_dssp             -EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC--------CEEEEECTTSSSEEEEEEECTTSCE
T ss_pred             -EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC--------ceEEEECCCCCCCCCeeEECCCCCE
Confidence             232333456789999999865 455567899999985  44 2110        0000111112234567899999988


Q ss_pred             EEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc-CCCcEEEEec
Q psy10662        145 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR-QLSRVLVAAN  206 (221)
Q Consensus       145 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~  206 (221)
                      .++...++.|..||. .++.+..+.               .+...+.+++|+ ++++.|+.++
T Consensus       244 wva~~~~~~v~~~d~-~g~~~~~i~---------------~~~~~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          244 WNARWGEGAVDRYDT-DGNHIARYE---------------VPGKQTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             EEEEETTTEEEEECT-TCCEEEEEE---------------CSCSBEEEEEEESTTSCEEEEEE
T ss_pred             EEEEeCCCEEEEECC-CCCEEEEEE---------------CCCCCcEEEEEecCCCCEEEEEe
Confidence            777766788999987 454443332               123458899998 8887665544

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.31  E-value=5.1e-10  Score=89.00  Aligned_cols=193  Identities=10%  Similarity=0.063  Sum_probs=125.5

Q ss_pred             CCeEEEEEecCCceeeEEEEeccCc--------------------------------eEEEEEec-CCcEEEecCCC---
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHRKA--------------------------------VSYVKFLN-KEDIVSASTDS---   55 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~~~--------------------------------i~~~~~~~-~~~l~s~~~d~---   55 (221)
                      +|.|+.||.. +++.+..+......                                ...+++.+ .+.++.+..++   
T Consensus       189 ~g~v~a~D~~-tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w  267 (677)
T 1kb0_A          189 RGYITAYDAE-TGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPW  267 (677)
T ss_dssp             BCEEEEEETT-TCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESS
T ss_pred             CCEEEEEECC-CCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccc
Confidence            6899999998 77777776532211                                12466776 45666665553   


Q ss_pred             ----------------cEEEEEcCCCccceeeec--cc-------cceeEEEEeCCC---CEEEEecCCCeEEEEECCCC
Q psy10662         56 ----------------QLKLWNINKPNCLRSFVG--HI-------NDKNFVGLATDG---DYVACGSENNSLYIYYKGLS  107 (221)
Q Consensus        56 ----------------~v~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~  107 (221)
                                      .|..+|.++++.+-.++.  |.       .....+....+|   ..++.++.+|.+.++|..++
T Consensus       268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG  347 (677)
T 1kb0_A          268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG  347 (677)
T ss_dssp             CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred             cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC
Confidence                            599999999988776643  21       122233444467   67899999999999999999


Q ss_pred             eeeEEEEeeccc--------ceeEe------------eEEEee--CceEEEEEecCCCEEEEecCC--------------
Q psy10662        108 KHMHAYRFDTVR--------SMLES------------SFVGHI--NDKNFVGLATDGDYVACGSEN--------------  151 (221)
Q Consensus       108 ~~~~~~~~~~~~--------~~~~~------------~~~~~~--~~v~~~~~~~~~~~l~~~~~d--------------  151 (221)
                      +.+..+.+....        .+.+.            ...+..  ..-..++++|+..++++...+              
T Consensus       348 ~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g  427 (677)
T 1kb0_A          348 KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFN  427 (677)
T ss_dssp             CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTT
T ss_pred             CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccc
Confidence            998877543321        11110            000000  000257889988887775432              


Q ss_pred             -----------------------------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE
Q psy10662        152 -----------------------------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL  202 (221)
Q Consensus       152 -----------------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  202 (221)
                                                   |.|..||+.+++.+-.+..                ..++....+..++.++
T Consensus       428 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----------------~~~~~~g~~~~~g~~v  491 (677)
T 1kb0_A          428 QAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH----------------VSPWNGGTLTTAGNVV  491 (677)
T ss_dssp             CCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE----------------SSSCCCCEEEETTTEE
T ss_pred             cccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC----------------CCCCcCcceEeCCCEE
Confidence                                         6788899888876554431                1223344456678888


Q ss_pred             EEecCCCeEEEEECCcccC
Q psy10662        203 VAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       203 ~~~~~dg~i~iw~~~~~~l  221 (221)
                      +.++.||.+++||..+|++
T Consensus       492 ~~g~~dg~l~a~D~~tG~~  510 (677)
T 1kb0_A          492 FQGTADGRLVAYHAATGEK  510 (677)
T ss_dssp             EEECTTSEEEEEETTTCCE
T ss_pred             EEECCCCcEEEEECCCCce
Confidence            9999999999999998863

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.29  E-value=7.3e-10  Score=88.29  Aligned_cols=193  Identities=10%  Similarity=0.046  Sum_probs=123.0

Q ss_pred             CCeEEEEEecCCceeeEEEEecc-------------------------------CceEEEEEec-CCcEEEecCCC----
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHR-------------------------------KAVSYVKFLN-KEDIVSASTDS----   55 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~-------------------------------~~i~~~~~~~-~~~l~s~~~d~----   55 (221)
                      +|.|+.||.. +++.+..+....                               ..-..+++.| .+.++.+..++    
T Consensus       182 ~g~v~a~D~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~  260 (689)
T 1yiq_A          182 RGYVTAYDAE-TGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWD  260 (689)
T ss_dssp             BCEEEEEETT-TCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred             CCEEEEEECC-CCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccc
Confidence            6899999998 777777665210                               0112567776 46677777665    


Q ss_pred             ---------------cEEEEEcCCCccceeeec--cc-------cceeEEEEeCCCC---EEEEecCCCeEEEEECCCCe
Q psy10662         56 ---------------QLKLWNINKPNCLRSFVG--HI-------NDKNFVGLATDGD---YVACGSENNSLYIYYKGLSK  108 (221)
Q Consensus        56 ---------------~v~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~v~iwd~~~~~  108 (221)
                                     .|..+|.++++.+-.++.  |.       .+........+|+   .++.++.+|.+.++|.++++
T Consensus       261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~  340 (689)
T 1yiq_A          261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE  340 (689)
T ss_dssp             HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred             cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence                           399999999998876643  21       1222223333564   78899999999999999999


Q ss_pred             eeEEEEeecccc---------eeEee------EEEee-----------CceEEEEEecCCCEEEEecC------------
Q psy10662        109 HMHAYRFDTVRS---------MLESS------FVGHI-----------NDKNFVGLATDGDYVACGSE------------  150 (221)
Q Consensus       109 ~~~~~~~~~~~~---------~~~~~------~~~~~-----------~~v~~~~~~~~~~~l~~~~~------------  150 (221)
                      .+....+.....         ..+..      +....           ..-..++++|+..++++...            
T Consensus       341 ~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~  420 (689)
T 1yiq_A          341 LLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA  420 (689)
T ss_dssp             EEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSC
T ss_pred             EeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccc
Confidence            987654433111         00000      00000           00123678888777776532            


Q ss_pred             ---------------------------------CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC
Q psy10662        151 ---------------------------------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ  197 (221)
Q Consensus       151 ---------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  197 (221)
                                                       +|.|+.||+.+++.+-.+..                ..+...-.+..
T Consensus       421 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----------------~~~~~~g~~~t  484 (689)
T 1yiq_A          421 PKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY----------------VTIFNGGTLST  484 (689)
T ss_dssp             CCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE----------------SSSCCCCEEEE
T ss_pred             ccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC----------------CCCccCccceE
Confidence                                             36788888888876554431                11222234556


Q ss_pred             CCcEEEEecCCCeEEEEECCcccC
Q psy10662        198 LSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       198 ~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      .+.+++.++.||.++.||.++|++
T Consensus       485 agglvf~gt~dg~l~a~D~~tG~~  508 (689)
T 1yiq_A          485 AGNLVFEGSADGRVIAYAADTGEK  508 (689)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCE
T ss_pred             CCCEEEEECCCCcEEEEECCCCcc
Confidence            788999999999999999999873

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.28  E-value=1.1e-09  Score=78.92  Aligned_cols=181  Identities=8%  Similarity=-0.001  Sum_probs=109.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEec-----cCceEEEEEecCCcEEE-----ecC-------------CCcE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH-----RKAVSYVKFLNKEDIVS-----AST-------------DSQL   57 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~l~s-----~~~-------------d~~v   57 (221)
                      |+|+++++...++.|.+|+..  ++. ..+..+     ...+..+++.+++.+..     +..             .+.|
T Consensus        95 ~dG~l~v~~~~~~~v~~~~~~--g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v  171 (305)
T 3dr2_A           95 AQQRLVHCEHGRRAITRSDAD--GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSV  171 (305)
T ss_dssp             TTSCEEEEETTTTEEEEECTT--SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEE
T ss_pred             CCCCEEEEECCCCEEEEECCC--CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeE
Confidence            467766665556788888875  322 222111     13467899998776655     332             2567


Q ss_pred             EEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCC------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC
Q psy10662         58 KLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN  131 (221)
Q Consensus        58 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (221)
                      ..+|..+++.....  .......++|+|+++.++.+...      +.|.+|++.... +....       ..  ......
T Consensus       172 ~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~-------~~--~~~~~~  239 (305)
T 3dr2_A          172 YRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRR-------HF--ASVPDG  239 (305)
T ss_dssp             EEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEE-------EE--ECCSSS
T ss_pred             EEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCe-------EE--EECCCC
Confidence            77777666544332  33456789999999977666554      689999886554 21110       00  001123


Q ss_pred             ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662        132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  211 (221)
                      .+..++++++|++.+ ++.+ .|.+|+. .++.+..+.               .+. .+.+++|+|+++.|+.++.++ +
T Consensus       240 ~pdgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~~~~~~---------------~~~-~~~~~~f~~d~~~L~it~~~~-l  299 (305)
T 3dr2_A          240 LPDGFCVDRGGWLWS-SSGT-GVCVFDS-DGQLLGHIP---------------TPG-TASNCTFDQAQQRLFITGGPC-L  299 (305)
T ss_dssp             CCCSEEECTTSCEEE-CCSS-EEEEECT-TSCEEEEEE---------------CSS-CCCEEEECTTSCEEEEEETTE-E
T ss_pred             CCCeEEECCCCCEEE-ecCC-cEEEECC-CCCEEEEEE---------------CCC-ceeEEEEeCCCCEEEEEcCCe-E
Confidence            455788999999544 4444 4889987 344443332               111 478899999998888877665 4


Q ss_pred             EEEEC
Q psy10662        212 KIYVI  216 (221)
Q Consensus       212 ~iw~~  216 (221)
                      ..+++
T Consensus       300 ~~~~~  304 (305)
T 3dr2_A          300 WMLPL  304 (305)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            33343

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.25  E-value=2.2e-08  Score=68.79  Aligned_cols=190  Identities=8%  Similarity=-0.006  Sum_probs=123.2

Q ss_pred             CceEEEEeCCC--eEEEEEecCCceeeEEEEeccCc-eEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          3 SCHLAFGSADH--CVHYYDLRNTKEALAVFKGHRKA-VSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         3 ~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      +.++.+.+.+|  .|+.+|+. +++.+..+...... -..+++..+..+...-.++.+.+||..+.+.+.++.... .-.
T Consensus        31 ~~LyestG~~g~S~v~~vD~~-tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gw  108 (243)
T 3mbr_X           31 GHLYESTGETGRSSVRKVDLE-TGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGW  108 (243)
T ss_dssp             TEEEEEECCTTSCEEEEEETT-TCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCC
T ss_pred             CEEEEECCCCCCceEEEEECC-CCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-Cce
Confidence            34555655654  89999998 78877777643322 234555555555566779999999999999998886432 223


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      .++  ++++.|+.+..++.|.++|..+.+.+..+.... .+       ..-..++.+.+. +|+..+..-.+..|.+.|.
T Consensus       109 glt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g-------~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp  177 (243)
T 3mbr_X          109 ALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GG-------RPLDNLNELEWV-NGELLANVWLTSRIARIDP  177 (243)
T ss_dssp             EEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-TT-------EECCCEEEEEEE-TTEEEEEETTTTEEEEECT
T ss_pred             EEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CC-------cccccceeeEEe-CCEEEEEECCCCeEEEEEC
Confidence            444  566666666668899999999988887763211 00       011234556655 6766666656789999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      ++++.+..+++...........  .......+.++++|+++.|+..+.
T Consensus       178 ~tG~V~~~idl~~l~~~~~~~~--~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          178 ASGKVVAWIDLQALVPDADALT--DSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             TTCBEEEEEECGGGSTTTTSCC--CTTSSCEEEEEEETTTTEEEEEET
T ss_pred             CCCCEEEEEECCcCcccccccc--CCcCCceEEEEEcCCCCEEEEECC
Confidence            9999998887654322111100  112345789999998766666554

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.25  E-value=1e-09  Score=87.25  Aligned_cols=164  Identities=9%  Similarity=0.073  Sum_probs=108.6

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEec-c----CceEEEEEecCCcEEEecC------CCcEEEEEcCCCccceee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH-R----KAVSYVKFLNKEDIVSAST------DSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~----~~i~~~~~~~~~~l~s~~~------d~~v~~wd~~~~~~~~~~   71 (221)
                      +..|++++.|+.|..+|.. +++.+..+..+ .    ..+.+--...++.++.++.      ++.|+.+|.++++.+-.+
T Consensus       128 ~~~v~v~~~dg~l~alD~~-tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~  206 (677)
T 1kb0_A          128 KGKVYVGAWDGRLIALDAA-TGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW  206 (677)
T ss_dssp             TTEEEEECTTSEEEEEETT-TCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEcCCCEEEEEECC-CCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence            4677888899999999998 78888777654 1    1222111112556665543      799999999999887665


Q ss_pred             ecccc--------------------------------ceeEEEEeCCCCEEEEecCCC-------------------eEE
Q psy10662         72 VGHIN--------------------------------DKNFVGLATDGDYVACGSENN-------------------SLY  100 (221)
Q Consensus        72 ~~~~~--------------------------------~v~~~~~~~~~~~l~~~~~d~-------------------~v~  100 (221)
                      .....                                ....++++|++..++.+..++                   .|.
T Consensus       207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~  286 (677)
T 1kb0_A          207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV  286 (677)
T ss_dssp             ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred             ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence            42211                                113578889888888777664                   599


Q ss_pred             EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC---CEEEEecCCCeEEEEEcCCCCceeeeeee
Q psy10662        101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG---DYVACGSENNSLYIYYKGLSKHMHAYRFD  171 (221)
Q Consensus       101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~  171 (221)
                      .+|..+++.+..++.......   .+. .......+....+|   ..++.++.+|.++++|..+++.+..+.+.
T Consensus       287 AlD~~TG~~~W~~~~~~~d~w---d~~-~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~  356 (677)
T 1kb0_A          287 ALDPDTGKYKWHYQETPGDNW---DYT-STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFV  356 (677)
T ss_dssp             EECTTTCCEEEEEESSTTCCS---CCC-CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred             EEECCCCCEEEEEecCCCccc---ccc-cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccc
Confidence            999999998877642211000   000 01222333444577   68999999999999999999988776543

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.24  E-value=1.8e-09  Score=79.06  Aligned_cols=188  Identities=9%  Similarity=0.009  Sum_probs=114.7

Q ss_pred             CCCceEEEEeC-----CCeEEEEEecCCceeeEEEEec------cCceEEEEEec-CCcE-EEec---CCCcEEEEEcCC
Q psy10662          1 MNSCHLAFGSA-----DHCVHYYDLRNTKEALAVFKGH------RKAVSYVKFLN-KEDI-VSAS---TDSQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~------~~~i~~~~~~~-~~~l-~s~~---~d~~v~~wd~~~   64 (221)
                      |+++++++-..     ++.|.+||+. +++.+..+...      ...+..+++++ ++.+ ++-.   .++.|.+||+.+
T Consensus        76 ~~g~L~v~D~g~~~~~~~~i~~~d~~-tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~  154 (343)
T 2qe8_A           76 GNGIVWMLDNGNQSKSVPKLVAWDTL-NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT  154 (343)
T ss_dssp             SSSEEEEEECHHHHTSCCEEEEEETT-TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred             CCCcEEEEcCCCCcCCCCeEEEEECC-CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence            35555554433     5789999987 66666666532      23568999996 4554 4544   578999999987


Q ss_pred             Cccceeeeccc-----------------------------cceeEEEEeCCCCEEEEecCCC-eEEEEECCCCeeeEEEE
Q psy10662         65 PNCLRSFVGHI-----------------------------NDKNFVGLATDGDYVACGSENN-SLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        65 ~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~l~~~~~d~-~v~iwd~~~~~~~~~~~  114 (221)
                      ++..+.+..|.                             ..+..++|+|+++.|+.+...+ .+..++......-    
T Consensus       155 g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~----  230 (343)
T 2qe8_A          155 GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL----  230 (343)
T ss_dssp             CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT----
T ss_pred             CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC----
Confidence            76554432210                             1357899999998777666554 4444442100000    


Q ss_pred             eecccceeEe--eEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeE
Q psy10662        115 FDTVRSMLES--SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSA  192 (221)
Q Consensus       115 ~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  192 (221)
                       .........  ...++......++++++|+++++...++.|.+||..+++......              ..+...+.+
T Consensus       231 -~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~--------------~~~~~~p~~  295 (343)
T 2qe8_A          231 -QLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT--------------DEKLSWTDS  295 (343)
T ss_dssp             -TCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE--------------CGGGSCEEE
T ss_pred             -CCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE--------------CCceecCCe
Confidence             000000000  112344456789999999999999999999999984443211111              012345789


Q ss_pred             EEEcCCCcEEEEecCC
Q psy10662        193 VCWRQLSRVLVAANSQ  208 (221)
Q Consensus       193 ~~~~~~~~~l~~~~~d  208 (221)
                      ++|.++++++++.+..
T Consensus       296 va~~~~g~l~v~~~~~  311 (343)
T 2qe8_A          296 FNFGSDGYLYFDCNQL  311 (343)
T ss_dssp             EEECTTSCEEEEECCG
T ss_pred             eEECCCCcEEEEeCcc
Confidence            9999999888887643

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.21  E-value=7.8e-09  Score=71.69  Aligned_cols=166  Identities=7%  Similarity=-0.025  Sum_probs=113.4

Q ss_pred             eeeEEEEeccC--ceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE--EEEeCCCCEEEEecCCCeEE
Q psy10662         25 EALAVFKGHRK--AVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF--VGLATDGDYVACGSENNSLY  100 (221)
Q Consensus        25 ~~~~~~~~~~~--~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~d~~v~  100 (221)
                      +.+.++. |..  ....+.|+.+..+++.+.+|.|+++|+++++.+..+  -......  +++.. +.+.+..-.++.+.
T Consensus        44 ~Vv~~~p-hd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g-~~Ly~ltw~~~~v~  119 (268)
T 3nok_A           44 HIIREYP-HATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDG-ERLYQLTWTEGLLF  119 (268)
T ss_dssp             EEEEEEE-CCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred             EEEEEEc-CCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeC-CEEEEEEccCCEEE
Confidence            3445553 443  357899987666778899999999999999998877  3333333  44432 23445555788999


Q ss_pred             EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccc
Q psy10662        101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERD  180 (221)
Q Consensus       101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~  180 (221)
                      +||..+.+.+.++..              ...-  ..+.++++.|+.+..++.|.++|..+.+.+..+.......     
T Consensus       120 V~D~~Tl~~~~ti~~--------------~~eG--wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~-----  178 (268)
T 3nok_A          120 TWSGMPPQRERTTRY--------------SGEG--WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ-----  178 (268)
T ss_dssp             EEETTTTEEEEEEEC--------------SSCC--CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE-----
T ss_pred             EEECCcCcEEEEEeC--------------CCce--eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc-----
Confidence            999999999888632              1111  2233667777777778999999999988877775332111     


Q ss_pred             ccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        181 RNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       181 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                           .-..++.+.|. +|++.+..-.++.|.+.|..++++
T Consensus       179 -----~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V  213 (268)
T 3nok_A          179 -----PVELINELECA-NGVIYANIWHSSDVLEIDPATGTV  213 (268)
T ss_dssp             -----ECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBE
T ss_pred             -----ccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcE
Confidence                 11234667776 776555555688999999998864

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.21  E-value=1.3e-12  Score=96.65  Aligned_cols=145  Identities=10%  Similarity=0.048  Sum_probs=81.5

Q ss_pred             cCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeE
Q psy10662         44 NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE  123 (221)
Q Consensus        44 ~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~  123 (221)
                      .++.+++++.|+.|+.||..+++.+..+..  +.+.+..+.+++..+++++.|+.|..||..+++.+..+.......  .
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~--~   83 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL--V   83 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH--H
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc--c
Confidence            367899999999999999999999887765  455555566677788888899999999998888765542111000  0


Q ss_pred             eeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE
Q psy10662        124 SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV  203 (221)
Q Consensus       124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  203 (221)
                           ...+    .+. .+..+++++.++.++.||..+++.+..+..               +.    ...++|++..++
T Consensus        84 -----~~sp----~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~---------------~~----~~~~~p~~~~v~  134 (369)
T 2hz6_A           84 -----QASP----CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSS---------------AF----ADSLSPSTSLLY  134 (369)
T ss_dssp             -----TTCS----CC------CCCCEEEEEEEEECCC-----------------------------------------EE
T ss_pred             -----ccCc----eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecC---------------CC----cccccccCCEEE
Confidence                 0001    111 345677888899999999998887654431               11    123456888999


Q ss_pred             EecCCCeEEEEECCcccC
Q psy10662        204 AANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       204 ~~~~dg~i~iw~~~~~~l  221 (221)
                      +++.|+.|+.||..+|++
T Consensus       135 ~~~~dg~v~a~d~~tG~~  152 (369)
T 2hz6_A          135 LGRTEYTITMYDTKTREL  152 (369)
T ss_dssp             EEEEEEEEECCCSSSSSC
T ss_pred             EEecCCEEEEEECCCCCE
Confidence            999999999999998763

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.20  E-value=4.9e-09  Score=83.56  Aligned_cols=163  Identities=10%  Similarity=0.089  Sum_probs=105.6

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEec--cCceEEEEEec---CCcEEEec------CCCcEEEEEcCCCccceee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH--RKAVSYVKFLN---KEDIVSAS------TDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~--~~~i~~~~~~~---~~~l~s~~------~d~~v~~wd~~~~~~~~~~   71 (221)
                      +..+++++.|+.|..+|.. +++.+..+...  ......+..+|   ++.++.++      .++.|+.||.++++.+-.+
T Consensus       121 ~g~v~v~~~dg~l~AlDa~-TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~  199 (689)
T 1yiq_A          121 KGKVYVGVLDGRLEAIDAK-TGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF  199 (689)
T ss_dssp             TTEEEEECTTSEEEEEETT-TCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEccCCEEEEEECC-CCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence            4577888899999999998 78777776642  11111111122   55665554      3789999999999887655


Q ss_pred             ecc-------------------------------ccceeEEEEeCCCCEEEEecCCCe-------------------EEE
Q psy10662         72 VGH-------------------------------INDKNFVGLATDGDYVACGSENNS-------------------LYI  101 (221)
Q Consensus        72 ~~~-------------------------------~~~v~~~~~~~~~~~l~~~~~d~~-------------------v~i  101 (221)
                      ...                               ......+++.|+..+++.+..++.                   |..
T Consensus       200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A  279 (689)
T 1yiq_A          200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA  279 (689)
T ss_dssp             ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred             cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence            311                               011125788898888888887764                   999


Q ss_pred             EECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC---EEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        102 YYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       102 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      +|.++++.+..++.......   .+ .....+.......+|+   .++.++.+|.++++|.++++.+....+
T Consensus       280 lD~~TG~~~W~~~~~~~d~w---d~-~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~  347 (689)
T 1yiq_A          280 VNADTGEYVWHYQTTPGDAW---DY-TATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGI  347 (689)
T ss_dssp             EETTTCCEEEEEESSTTCCS---CC-CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred             EEccCCceeEeeecCCcccc---cc-cCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccc
Confidence            99999998877642211000   00 0111222223333565   788999999999999999998865544

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.19  E-value=3.3e-08  Score=73.18  Aligned_cols=154  Identities=10%  Similarity=-0.048  Sum_probs=99.0

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEec---------cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH---------RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG   73 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~   73 (221)
                      +..+.+++.++.|..+|.. +++.+......         ...+.+.....++.++.++.++.|..+|.++++.+.....
T Consensus        53 ~~~v~~~~~~g~v~a~d~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~  131 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNAD-DGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV  131 (376)
T ss_dssp             TTEEEEECTTSEEEEEETT-TCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEEcc-CCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence            4567788889999999997 67776665542         1223332223467888899999999999999988766543


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      ...........  +..++.++.++.|..+|..+++.+..+......    .......    .....  +..+++++.++.
T Consensus       132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~----~~~~~~~----~~~~~--~~~v~~g~~~g~  199 (376)
T 3q7m_A          132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS----LSLRGES----APTTA--FGAAVVGGDNGR  199 (376)
T ss_dssp             SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC---------CCCC----CCEEE--TTEEEECCTTTE
T ss_pred             CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc----eeecCCC----CcEEE--CCEEEEEcCCCE
Confidence            32222222222  457778888999999999999887665221100    0000001    11111  346777888999


Q ss_pred             EEEEEcCCCCceeeee
Q psy10662        154 LYIYYKGLSKHMHAYR  169 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~  169 (221)
                      +..+|..+++.+-...
T Consensus       200 l~~~d~~tG~~~w~~~  215 (376)
T 3q7m_A          200 VSAVLMEQGQMIWQQR  215 (376)
T ss_dssp             EEEEETTTCCEEEEEE
T ss_pred             EEEEECCCCcEEEEEe
Confidence            9999999888765544

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.16  E-value=1.6e-08  Score=70.08  Aligned_cols=168  Identities=9%  Similarity=0.056  Sum_probs=110.8

Q ss_pred             eeeEEEEeccC--ceEEEEEecCCcEEEecCCC--cEEEEEcCCCccceeeeccccceeEEEEeCCCCEE-EEecCCCeE
Q psy10662         25 EALAVFKGHRK--AVSYVKFLNKEDIVSASTDS--QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYV-ACGSENNSL   99 (221)
Q Consensus        25 ~~~~~~~~~~~--~i~~~~~~~~~~l~s~~~d~--~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v   99 (221)
                      +.+.++. |..  ....+.|+++..+.+++.+|  .|+++|+++++.+..+... .......+.+.++.+ +..-.++.+
T Consensus        32 ~vv~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v  109 (262)
T 3nol_A           32 QIVHSYP-HDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLG  109 (262)
T ss_dssp             EEEEEEE-CCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEE
T ss_pred             EEEEEec-CCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEE
Confidence            3455554 543  35889998554456777766  8999999999998877533 333333333344444 444568899


Q ss_pred             EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccc
Q psy10662        100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLER  179 (221)
Q Consensus       100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~  179 (221)
                      .+||..+.+.+.++...              .  ....+.++++.|+.+..++.|.++|..+.+.+..+.....+.    
T Consensus       110 ~v~D~~t~~~~~ti~~~--------------~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~----  169 (262)
T 3nol_A          110 FVWNIRNLRQVRSFNYD--------------G--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE----  169 (262)
T ss_dssp             EEEETTTCCEEEEEECS--------------S--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE----
T ss_pred             EEEECccCcEEEEEECC--------------C--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc----
Confidence            99999999998876221              1  123344677777777778899999999988877765322110    


Q ss_pred             cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        180 DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       180 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                            .-..++.+.|. +|++.+..-.++.|.+.|..++++
T Consensus       170 ------~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V  204 (262)
T 3nol_A          170 ------ELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKV  204 (262)
T ss_dssp             ------ECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBE
T ss_pred             ------cccccceeEEE-CCEEEEEEccCCeEEEEECCCCcE
Confidence                  01234557775 676665555688999999988864

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.15  E-value=1.7e-08  Score=77.79  Aligned_cols=209  Identities=8%  Similarity=-0.004  Sum_probs=127.2

Q ss_pred             CCCceEEEEeC-CCeEEEEEecCCceeeEEEEec-cCceEEEEE-e-c-CCcEEEec------------------CCCcE
Q psy10662          1 MNSCHLAFGSA-DHCVHYYDLRNTKEALAVFKGH-RKAVSYVKF-L-N-KEDIVSAS------------------TDSQL   57 (221)
Q Consensus         1 ~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~-~-~-~~~l~s~~------------------~d~~v   57 (221)
                      +||++|..... ++.|.+.|+. +.++.+.+.-- ...+..+++ . | ++++++++                  .++.+
T Consensus        99 ~DG~~lfVnd~~~~rVavIdl~-t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v  177 (595)
T 1fwx_A           99 YDGRFLFMNDKANTRVARVRCD-VMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF  177 (595)
T ss_dssp             EEEEEEEEEETTTTEEEEEETT-TTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred             cCCCEEEEEcCCCCEEEEEECC-CceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence            36777776665 4579999998 77777755422 245788887 3 5 45566653                  24679


Q ss_pred             EEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCC---------------eEEEEECCCC-------e-----ee
Q psy10662         58 KLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENN---------------SLYIYYKGLS-------K-----HM  110 (221)
Q Consensus        58 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~v~iwd~~~~-------~-----~~  110 (221)
                      .+.|..+.+.+.++.-.. ....++++|+|+++++.+.+.               .|.+.|....       +     .+
T Consensus       178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V  256 (595)
T 1fwx_A          178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV  256 (595)
T ss_dssp             EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred             EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence            999999888877775322 457788999999988877553               3455543111       0     01


Q ss_pred             EEEEeeccc--cee-EeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662        111 HAYRFDTVR--SML-ESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT  186 (221)
Q Consensus       111 ~~~~~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (221)
                      ..+  |...  ... +..+. -.....++.++|||+++++++ .+..|.++|+.+.+....-+++.......   .. .-
T Consensus       257 ~VI--D~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~---~v-~v  329 (595)
T 1fwx_A          257 KVV--DGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA---EP-EL  329 (595)
T ss_dssp             EEE--ECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE---CC-BC
T ss_pred             EEE--eCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE---Ec-CC
Confidence            111  2222  112 22222 234567899999999876655 67899999988543210000000000000   00 12


Q ss_pred             ccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        187 NEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       187 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ......++|+|+|....+.-.|++|..|++.+
T Consensus       330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence            33568899999994444555799999999875

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.14  E-value=3.8e-09  Score=77.83  Aligned_cols=108  Identities=10%  Similarity=-0.018  Sum_probs=81.0

Q ss_pred             CCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----------CCCeEEEEECCCCeeeEEEEeecccceeE
Q psy10662         54 DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----------ENNSLYIYYKGLSKHMHAYRFDTVRSMLE  123 (221)
Q Consensus        54 d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~  123 (221)
                      ++.|.+.|..+.+.+..+.....+ . ++++|+|++++++.          .++.|.+||..+.+.+.++.......   
T Consensus        58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r---  132 (386)
T 3sjl_D           58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPR---  132 (386)
T ss_dssp             SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC---
T ss_pred             CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccc---
Confidence            679999999999999888654555 4 99999999876664          36789999999998887752110000   


Q ss_pred             eeEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCCCCceeeee
Q psy10662        124 SSFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~  169 (221)
                         .........++|+|||++++++..  ++.|.++|+.+.+.+..+.
T Consensus       133 ---~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~  177 (386)
T 3sjl_D          133 ---FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD  177 (386)
T ss_dssp             ---CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred             ---cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence               000123556899999999888864  6899999999998887774

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.14  E-value=7.8e-08  Score=67.31  Aligned_cols=170  Identities=13%  Similarity=0.052  Sum_probs=112.9

Q ss_pred             ceeeEEEEeccC--ceEEEEEecCCcEEEec-C--CCcEEEEEcCCCccceeeecccc-ceeEEEEeCCCCEEEEecCCC
Q psy10662         24 KEALAVFKGHRK--AVSYVKFLNKEDIVSAS-T--DSQLKLWNINKPNCLRSFVGHIN-DKNFVGLATDGDYVACGSENN   97 (221)
Q Consensus        24 ~~~~~~~~~~~~--~i~~~~~~~~~~l~s~~-~--d~~v~~wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~   97 (221)
                      .+.+.++. |..  ....++|++++.|+.++ .  ++.|.++|+.+++.+..+.-... ....+++.. +...++.-.++
T Consensus         9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~   86 (266)
T 2iwa_A            9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKN   86 (266)
T ss_dssp             EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCS
T ss_pred             ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCC
Confidence            34556665 553  36899999866665543 2  68999999999998887642221 223455542 23445556788


Q ss_pred             eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccc
Q psy10662         98 SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML  177 (221)
Q Consensus        98 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~  177 (221)
                      .+.++|..+.+.+.++..            + ...  ...++++|+.++++..++.|.++|..+.+....+......   
T Consensus        87 ~v~viD~~t~~v~~~i~~------------g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~---  148 (266)
T 2iwa_A           87 IGFIYDRRTLSNIKNFTH------------Q-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG---  148 (266)
T ss_dssp             EEEEEETTTTEEEEEEEC------------C-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT---
T ss_pred             EEEEEECCCCcEEEEEEC------------C-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC---
Confidence            999999999988877521            1 011  2335678887777777899999999988877766532210   


Q ss_pred             cccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        178 ERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       178 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                             ..-..++.+.|. +|+..+....++.|.+.|..++++
T Consensus       149 -------~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V  184 (266)
T 2iwa_A          149 -------HRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTL  184 (266)
T ss_dssp             -------EECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCE
T ss_pred             -------cccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcE
Confidence                   011135677887 776555555688999999998763

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.11  E-value=1.6e-08  Score=80.90  Aligned_cols=188  Identities=11%  Similarity=0.076  Sum_probs=113.2

Q ss_pred             CCceEEEEeCCC-------------eEEEEEecCCce-eeEEEE--e-ccCceEEEEEecCCc-EE-Eec---CCCcEEE
Q psy10662          2 NSCHLAFGSADH-------------CVHYYDLRNTKE-ALAVFK--G-HRKAVSYVKFLNKED-IV-SAS---TDSQLKL   59 (221)
Q Consensus         2 ~~~~l~~~~~dg-------------~i~i~~~~~~~~-~~~~~~--~-~~~~i~~~~~~~~~~-l~-s~~---~d~~v~~   59 (221)
                      |++.|+.++.+.             .|++|++.+... ....+.  . |...+..+.|+|++. |+ +.+   ....|++
T Consensus       184 Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~  263 (693)
T 3iuj_A          184 GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYV  263 (693)
T ss_dssp             TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEE
T ss_pred             CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE
Confidence            567777777664             499999873322 122222  2 444578899998655 43 332   2358999


Q ss_pred             EEcCCCc-cceeeeccccceeEEEEeCCCCEE-EEecC---CCeEEEEECCCCee--eEEEEeecccceeEeeEEEeeCc
Q psy10662         60 WNINKPN-CLRSFVGHINDKNFVGLATDGDYV-ACGSE---NNSLYIYYKGLSKH--MHAYRFDTVRSMLESSFVGHIND  132 (221)
Q Consensus        60 wd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~---d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  132 (221)
                      +|+.++. ....+..+....... ++++++.| +.+..   .+.|..+|+.+++.  ...             +..+...
T Consensus       264 ~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~-------------l~~~~~~  329 (693)
T 3iuj_A          264 KDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRD-------------LIPERQQ  329 (693)
T ss_dssp             EETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE-------------EECCCSS
T ss_pred             EECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEE-------------EecCCCC
Confidence            9997764 344555555555554 56666654 44433   36788999876543  111             2334444


Q ss_pred             eEEEEEecCCCEEEEecC-CC--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-
Q psy10662        133 KNFVGLATDGDYVACGSE-NN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-  208 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  208 (221)
                      +.  .|+++++.|+.... ++  .|++|++..+ ....+.+              .....+..+.++++++.|+....+ 
T Consensus       330 ~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~--------------p~~~~~~~~~~~~d~~~l~~~~ss~  392 (693)
T 3iuj_A          330 VL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVAL--------------PGLGSVSGFNGKHDDPALYFGFENY  392 (693)
T ss_dssp             CE--EEEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECC--------------SSSSEEEECCCCTTCSCEEEEEECS
T ss_pred             EE--EEEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeec--------------CCCceEEeeecCCCCCEEEEEecCC
Confidence            43  88999988776665 43  6888887633 2222211              123356677788888766655433 


Q ss_pred             ---CeEEEEECCccc
Q psy10662        209 ---GIIKIYVIPIRV  220 (221)
Q Consensus       209 ---g~i~iw~~~~~~  220 (221)
                         +.+..||+.+++
T Consensus       393 ~tP~~l~~~d~~~g~  407 (693)
T 3iuj_A          393 AQPPTLYRFEPKSGA  407 (693)
T ss_dssp             SSCCEEEEECTTTCC
T ss_pred             CCCCEEEEEECCCCe
Confidence               789999987664

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.11  E-value=3.3e-09  Score=81.61  Aligned_cols=206  Identities=10%  Similarity=-0.068  Sum_probs=122.7

Q ss_pred             CCCceEEEEe------------------CCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCC------
Q psy10662          1 MNSCHLAFGS------------------ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDS------   55 (221)
Q Consensus         1 ~~~~~l~~~~------------------~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~------   55 (221)
                      |++.++.+++                  .++.+.+.|.+ +.+...++.--. ....++++|+ +++++++.+.      
T Consensus       145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~-t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i  222 (595)
T 1fwx_A          145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD-KWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTL  222 (595)
T ss_dssp             SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT-TTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSH
T ss_pred             CCCcEEEEecccccccCCCCcccccccccCceEEEEECC-CCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcch
Confidence            5777777774                  34679999998 677777776422 4456667764 4455554332      


Q ss_pred             --------------------------------cEEEEEcCC--Ccc-ceeeeccccceeEEEEeCCCCEEEE-ecCCCeE
Q psy10662         56 --------------------------------QLKLWNINK--PNC-LRSFVGHINDKNFVGLATDGDYVAC-GSENNSL   99 (221)
Q Consensus        56 --------------------------------~v~~wd~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v   99 (221)
                                                      .|.+.|.++  ++. +..+.. .....++.++|||+++++ +..+.+|
T Consensus       223 ~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~V  301 (595)
T 1fwx_A          223 PEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTV  301 (595)
T ss_dssp             HHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBE
T ss_pred             hhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeE
Confidence                                            467777766  434 344432 335678999999997654 4568899


Q ss_pred             EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC----------Cceeeee
Q psy10662        100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS----------KHMHAYR  169 (221)
Q Consensus       100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~----------~~~~~~~  169 (221)
                      .++|+.+.+....-..+.. ....... .-......++|+|+|...++...|+.|.+||+...          ..+..+.
T Consensus       302 sVid~~~~~~~~~~~l~~~-~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid  379 (595)
T 1fwx_A          302 TVLDVTRFDAVFYENADPR-SAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD  379 (595)
T ss_dssp             EEEEGGGHHHHHHSCCCGG-GGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE
T ss_pred             EEEECcccccccccccCcc-cceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee
Confidence            9999986531100000000 1111111 22345778999999955566778999999998762          2222221


Q ss_pred             eecccccccccccccccccceeEEEEcCCCcEEEEecC---CCe----------EEEEECCcccC
Q psy10662        170 FDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS---QGI----------IKIYVIPIRVL  221 (221)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~----------i~iw~~~~~~l  221 (221)
                      ..          ...+|...-..+.++|||++|+++..   |..          -.++|+.++++
T Consensus       380 V~----------yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m  434 (595)
T 1fwx_A          380 VH----------YQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKM  434 (595)
T ss_dssp             CS----------SCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred             cc----------cccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence            10          00123222234466899999999864   432          17788876653

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.10  E-value=9.2e-08  Score=70.75  Aligned_cols=189  Identities=11%  Similarity=-0.019  Sum_probs=116.4

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce----
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK----   78 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v----   78 (221)
                      +..+.+++.++.|..+|.. +++.+............... .++.++.++.++.|..+|.++++.+..........    
T Consensus       103 ~~~v~v~~~~g~l~a~d~~-tG~~~W~~~~~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~  180 (376)
T 3q7m_A          103 GGHVYIGSEKAQVYALNTS-DGTVAWQTKVAGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG  180 (376)
T ss_dssp             TTEEEEEETTSEEEEEETT-TCCEEEEEECSSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred             CCEEEEEcCCCEEEEEECC-CCCEEEEEeCCCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence            4567778889999999997 67777666543322212222 36678888999999999999998876654322111    


Q ss_pred             -eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeeccccee-EeeEE-EeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         79 -NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML-ESSFV-GHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        79 -~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                       ......  +..++.++.++.+..+|..+++.+............ ...+. ....+    ..  .+..+++++.++.+.
T Consensus       181 ~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p----~~--~~~~v~~~~~~g~l~  252 (376)
T 3q7m_A          181 ESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTP----VV--VNGVVFALAYNGNLT  252 (376)
T ss_dssp             CCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCC----EE--ETTEEEEECTTSCEE
T ss_pred             CCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCc----EE--ECCEEEEEecCcEEE
Confidence             122222  456778888999999999999887665322110000 00000 00001    11  245677778899999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+|..+++.+.....                 .....+..  ++..|+.++.++.+..+|..+++
T Consensus       253 ~~d~~tG~~~w~~~~-----------------~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~  298 (376)
T 3q7m_A          253 ALDLRSGQIMWKREL-----------------GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV  298 (376)
T ss_dssp             EEETTTCCEEEEECC-----------------CCEEEEEE--ETTEEEEEETTCCEEEEETTTCC
T ss_pred             EEECCCCcEEeeccC-----------------CCCCCceE--ECCEEEEEcCCCeEEEEECCCCc
Confidence            999988876543321                 11223333  35667777788899999988775

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.10  E-value=5.3e-07  Score=63.47  Aligned_cols=188  Identities=8%  Similarity=-0.008  Sum_probs=112.2

Q ss_pred             CceEEEEeCCCeEEEEEecCCcee----eEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeecccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEA----LAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~----~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      |.+|..+. .+.|+.++++.....    ...+......+..++|++ ++.|+ +-..++.|..+++........+.....
T Consensus         1 ~~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~   79 (267)
T 1npe_A            1 GTHLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG   79 (267)
T ss_dssp             CEEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred             CcEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence            34566655 358999998732211    112222234578999997 45554 555678999999876544333322224


Q ss_pred             ceeEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC---CC
Q psy10662         77 DKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE---NN  152 (221)
Q Consensus        77 ~v~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~  152 (221)
                      ....++++|++.. +++-...+.|.++++..... ..+            ..........++++|++..|..+..   .+
T Consensus        80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~------------~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~  146 (267)
T 1npe_A           80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVL------------FDTGLVNPRGIVTDPVRGNLYWTDWNRDNP  146 (267)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE------------ECSSCSSEEEEEEETTTTEEEEEECCSSSC
T ss_pred             CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEE------------EECCCCCccEEEEeeCCCEEEEEECCCCCc
Confidence            5789999997554 45556678899998864322 111            0111245678999996655554443   36


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE-ecCCCeEEEEECCcc
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA-ANSQGIIKIYVIPIR  219 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iw~~~~~  219 (221)
                      .|..+++..... ..+.            .  ........++++|++..|+. -...+.|..+++.++
T Consensus       147 ~I~~~~~dg~~~-~~~~------------~--~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~  199 (267)
T 1npe_A          147 KIETSHMDGTNR-RILA------------Q--DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP  199 (267)
T ss_dssp             EEEEEETTSCCC-EEEE------------C--TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred             EEEEEecCCCCc-EEEE------------E--CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence            788887653221 1110            0  11124678999998765544 445789999998753

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.09  E-value=1.1e-08  Score=74.20  Aligned_cols=175  Identities=13%  Similarity=0.042  Sum_probs=111.8

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL   83 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~   83 (221)
                      ..|..++.++.|..+|..  ++.......+...+.++...+++.++.++.++.+..+|.. ++....+......+.++..
T Consensus       108 ~~l~v~t~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~  184 (330)
T 3hxj_A          108 DILYVTSMDGHLYAINTD--GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI  184 (330)
T ss_dssp             TEEEEECTTSEEEEECTT--SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred             CEEEEEecCCEEEEEcCC--CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence            456677788889999876  4455555545555666776767788889989999999988 7766666544556777778


Q ss_pred             eCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC
Q psy10662         84 ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK  163 (221)
Q Consensus        84 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~  163 (221)
                      .+++.+++..   +.|..+| .+++....+             ......+.++...+++. |.+++.++.+..+|. +++
T Consensus       185 d~~g~l~v~t---~~l~~~d-~~g~~~~~~-------------~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~  245 (330)
T 3hxj_A          185 GKDGTIYFGS---DKVYAIN-PDGTEKWNF-------------YAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGT  245 (330)
T ss_dssp             CTTCCEEEES---SSEEEEC-TTSCEEEEE-------------CCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSC
T ss_pred             cCCCEEEEEe---CEEEEEC-CCCcEEEEE-------------ccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCC
Confidence            7777755544   6788999 666655433             11224466777788775 445666777888873 444


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      ....+.  .             ....+..+.+.+++. |..++.+|.|..+|.
T Consensus       246 ~~~~~~--~-------------~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~  282 (330)
T 3hxj_A          246 EKWRFK--T-------------GKRIESSPVIGNTDT-IYFGSYDGHLYAINP  282 (330)
T ss_dssp             EEEEEE--C-------------SSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred             EeEEee--C-------------CCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence            333222  1             111122344555554 555666777777774

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.08  E-value=2.1e-08  Score=74.16  Aligned_cols=103  Identities=8%  Similarity=-0.094  Sum_probs=75.0

Q ss_pred             cEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----------CCCeEEEEECCCCeeeEEEEeecccceeEee
Q psy10662         56 QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESS  125 (221)
Q Consensus        56 ~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~  125 (221)
                      .|.++|..+++.+..+.....+  .++++|++++++.+.          .++.|.+||..+.+.+..+..... .    .
T Consensus        48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~-~----~  120 (373)
T 2mad_H           48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA-P----R  120 (373)
T ss_pred             EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc-c----c
Confidence            8899999999888777544333  999999999887775          367899999998888766521100 0    0


Q ss_pred             EEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCCCCceee
Q psy10662        126 FVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHA  167 (221)
Q Consensus       126 ~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~  167 (221)
                      .. .......++|+|+|++|++++.  ++.|.++| .+++....
T Consensus       121 ~~-~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~  162 (373)
T 2mad_H          121 FD-VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ  162 (373)
T ss_pred             cc-cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence            00 0123457899999999998874  47899999 88876655

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.06  E-value=1.8e-07  Score=64.28  Aligned_cols=168  Identities=8%  Similarity=0.037  Sum_probs=110.3

Q ss_pred             eeeEEEEecc--CceEEEEEecCCcEEEecCCC--cEEEEEcCCCccceeeeccccceeEEEEeCCCC-EEEEecCCCeE
Q psy10662         25 EALAVFKGHR--KAVSYVKFLNKEDIVSASTDS--QLKLWNINKPNCLRSFVGHINDKNFVGLATDGD-YVACGSENNSL   99 (221)
Q Consensus        25 ~~~~~~~~~~--~~i~~~~~~~~~~l~s~~~d~--~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v   99 (221)
                      +.+.++. |.  .....+.|+++..+.+.+.+|  .|+.+|+.+++.+..+.-.. ........+.++ +....-.++.+
T Consensus        10 ~v~~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v   87 (243)
T 3mbr_X           10 RVVKRYP-HDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEG   87 (243)
T ss_dssp             EEEEEEE-CCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEE
T ss_pred             EEEEEcC-CCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEE
Confidence            4555663 54  347799999865566777754  89999999999988775332 222222222344 44555678999


Q ss_pred             EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccc
Q psy10662        100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLER  179 (221)
Q Consensus       100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~  179 (221)
                      .+||..+.+.+.++...              ..-  ..+.++++.|+.+..++.|.++|..+.+.+..+........   
T Consensus        88 ~v~D~~tl~~~~ti~~~--------------~~G--wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~---  148 (243)
T 3mbr_X           88 FVYDLATLTPRARFRYP--------------GEG--WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP---  148 (243)
T ss_dssp             EEEETTTTEEEEEEECS--------------SCC--CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEE---
T ss_pred             EEEECCcCcEEEEEeCC--------------CCc--eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc---
Confidence            99999999998876321              112  23346677777777789999999999888777753321110   


Q ss_pred             cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662        180 DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       180 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                             -..++.+.+. +|+..+..-.+..|.+.|..++++
T Consensus       149 -------~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V  182 (243)
T 3mbr_X          149 -------LDNLNELEWV-NGELLANVWLTSRIARIDPASGKV  182 (243)
T ss_dssp             -------CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBE
T ss_pred             -------cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCE
Confidence                   1234556664 666555554677899999888764

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.03  E-value=3.9e-08  Score=71.22  Aligned_cols=177  Identities=11%  Similarity=0.033  Sum_probs=114.0

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL   83 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~   83 (221)
                      ..|..++.++.|..+|..  ++....+......+.++...+++.+..++  +.+..+| .+++....+......+.++..
T Consensus       148 g~l~vgt~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~  222 (330)
T 3hxj_A          148 GTIYVGSNDNYLYAINPD--GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAI  222 (330)
T ss_dssp             SCEEEECTTSEEEEECTT--SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEE
T ss_pred             CEEEEEcCCCEEEEECCC--CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEE
Confidence            346667788999999976  55555555555667777776677777777  8899999 677666655545566888888


Q ss_pred             eCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC
Q psy10662         84 ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK  163 (221)
Q Consensus        84 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~  163 (221)
                      .+++. +..++.++.+..+|. +++.+..+             ......+..+.+.+++ .|.+++.+|.+..+|. +++
T Consensus       223 ~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~-------------~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~  285 (330)
T 3hxj_A          223 SEDGT-IYVTSLDGHLYAINP-DGTEKWRF-------------KTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGT  285 (330)
T ss_dssp             CTTSC-EEEEETTTEEEEECT-TSCEEEEE-------------ECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSC
T ss_pred             CCCCe-EEEEcCCCeEEEECC-CCCEeEEe-------------eCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCc
Confidence            88775 444556777888874 44444332             1111222334455555 4666778888999985 555


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ....+..               ....+.++...++|+ |..++.+|.+++...+.
T Consensus       286 ~~~~~~~---------------~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~  324 (330)
T 3hxj_A          286 EKWNFET---------------GSWIIATPVIDENGT-IYFGTRNGKFYALFNLE  324 (330)
T ss_dssp             EEEEEEC---------------SSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred             EEEEEEc---------------CCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence            4433321               123456677777776 55577899999887764

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.00  E-value=1.3e-06  Score=61.41  Aligned_cols=186  Identities=5%  Similarity=-0.064  Sum_probs=107.1

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      .++++-..++.|..+++. .......+.........+++.+ ++.++ +-...+.|.++++..................+
T Consensus        49 ~ly~~d~~~~~I~~~~~~-g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i  127 (267)
T 1npe_A           49 VVYWTDISEPSIGRASLH-GGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGI  127 (267)
T ss_dssp             EEEEEETTTTEEEEEESS-SCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred             EEEEEECCCCEEEEEecC-CCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEE
Confidence            344444456788888886 3332222222224678999997 45544 55567899999986433222222122456889


Q ss_pred             EEeCCCCEEEEec-C--CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EEecCCCeEEEE
Q psy10662         82 GLATDGDYVACGS-E--NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIY  157 (221)
Q Consensus        82 ~~~~~~~~l~~~~-~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~  157 (221)
                      +++|++..+..+. .  .+.|..+++.... ...+            ..........++++|++..| ++-...+.|..+
T Consensus       128 ~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~------------~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~  194 (267)
T 1npe_A          128 VTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRIL------------AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL  194 (267)
T ss_dssp             EEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEE------------ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEE------------EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence            9999655544333 2  4678888765322 1111            00112357789999987655 444556889999


Q ss_pred             EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |...........               . ......++.. .+.++++....+.|..++..+++
T Consensus       195 ~~~g~~~~~~~~---------------~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~  240 (267)
T 1npe_A          195 NPAQPGRRKVLE---------------G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK  240 (267)
T ss_dssp             ETTEEEEEEEEE---------------C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTE
T ss_pred             ecCCCceEEEec---------------C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCC
Confidence            986432211110               0 1122456654 44455555567899999988764

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.99  E-value=9e-07  Score=64.07  Aligned_cols=184  Identities=8%  Similarity=-0.025  Sum_probs=113.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEe--------------------ccCceEEEEEec-CCcEEEecCCCcEEE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG--------------------HRKAVSYVKFLN-KEDIVSASTDSQLKL   59 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~--------------------~~~~i~~~~~~~-~~~l~s~~~d~~v~~   59 (221)
                      ++++++.++..++.|..|+.. ++. +..+..                    ....+..+++.+ ++.|+.+...+.+..
T Consensus        28 ~~g~~l~v~~~~~~i~~~~~~-~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~  105 (322)
T 2fp8_A           28 STNKGFYTSVQDGRVIKYEGP-NSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSV  105 (322)
T ss_dssp             TTCSSEEEECTTSEEEEECCT-TTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred             CCCCEEEEEcCCCeEEEECCC-CCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEE
Confidence            456778888888999999876 332 222321                    113578899996 777777766666888


Q ss_pred             EEcCCCccceeeec-----cccceeEEEEeC-CCCEEEEecC-----------------CCeEEEEECCCCeeeEEEEee
Q psy10662         60 WNINKPNCLRSFVG-----HINDKNFVGLAT-DGDYVACGSE-----------------NNSLYIYYKGLSKHMHAYRFD  116 (221)
Q Consensus        60 wd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~v~iwd~~~~~~~~~~~~~  116 (221)
                      +|..+++. ..+..     .......+++.+ +|.+.++-..                 ++.|..+|..+++....    
T Consensus       106 ~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~----  180 (322)
T 2fp8_A          106 VGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL----  180 (322)
T ss_dssp             ECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE----
T ss_pred             EeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe----
Confidence            88765532 22211     112467899999 8887665432                 36688888765543211    


Q ss_pred             cccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCc--eeeeeeecccccccccccccccccceeEE
Q psy10662        117 TVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKH--MHAYRFDTVRSMLERDRNEDDTNEFVSAV  193 (221)
Q Consensus       117 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  193 (221)
                                .........++++|+++.|+++ ...+.|..|++.....  ...+.            ..   .. ...+
T Consensus       181 ----------~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~------------~~---~g-P~gi  234 (322)
T 2fp8_A          181 ----------LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV------------KI---PN-PGNI  234 (322)
T ss_dssp             ----------EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE------------EC---SS-EEEE
T ss_pred             ----------ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE------------eC---CC-CCCe
Confidence                      1222345679999999866554 5668999999875321  11110            01   11 5678


Q ss_pred             EEcCCCcEEEEecC----------CCeEEEEECC
Q psy10662        194 CWRQLSRVLVAANS----------QGIIKIYVIP  217 (221)
Q Consensus       194 ~~~~~~~~l~~~~~----------dg~i~iw~~~  217 (221)
                      +++++|++.++...          .+.|..++..
T Consensus       235 ~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~  268 (322)
T 2fp8_A          235 KRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF  268 (322)
T ss_dssp             EECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred             EECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence            88999886666543          3556666543

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.96  E-value=2.1e-08  Score=75.03  Aligned_cols=142  Identities=9%  Similarity=-0.086  Sum_probs=94.5

Q ss_pred             CcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----------CCCeEEEEECCCCeeeEEEEeecccceeEe
Q psy10662         55 SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----------ENNSLYIYYKGLSKHMHAYRFDTVRSMLES  124 (221)
Q Consensus        55 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~  124 (221)
                      +.|.++|..+.+.+..+..-..+  .+.++|++++++++.          .++.|.++|..+.+.+.++.......    
T Consensus        99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r----  172 (426)
T 3c75_H           99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR----  172 (426)
T ss_dssp             EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC----
T ss_pred             CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc----
Confidence            79999999999999888655555  899999999877665          46789999999999887763210000    


Q ss_pred             eEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE
Q psy10662        125 SFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL  202 (221)
Q Consensus       125 ~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  202 (221)
                       + ........+.|+|||++++++..  ++.|.+.|+.+.+.+..+.....      . ... ....-.-+.++++|+++
T Consensus       173 -~-~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~------~-~~~-p~g~~~~v~~~~dG~~~  242 (426)
T 3c75_H          173 -F-LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC------Y-HIF-PASPTVFYMNCRDGSLA  242 (426)
T ss_dssp             -C-CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE------E-EEE-EEETTEEEEEETTSSEE
T ss_pred             -c-ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc------e-eec-cCCCcEEEEEcCCCCEE
Confidence             0 00123456889999999998874  57899999999988777653110      0 000 00011224566777766


Q ss_pred             EEecCCCeEE
Q psy10662        203 VAANSQGIIK  212 (221)
Q Consensus       203 ~~~~~dg~i~  212 (221)
                      +....++.+.
T Consensus       243 ~V~~~~~~v~  252 (426)
T 3c75_H          243 RVDFADGETK  252 (426)
T ss_dssp             EEECCTTCCE
T ss_pred             EEECCCCcEE
Confidence            6655555443

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.95  E-value=2.2e-07  Score=73.96  Aligned_cols=192  Identities=10%  Similarity=0.066  Sum_probs=118.6

Q ss_pred             CCeEEEEEecCCceeeEEEEeccC-------------------------------ceEEEEEec-CCcEEEecCCC----
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHRK-------------------------------AVSYVKFLN-KEDIVSASTDS----   55 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~~-------------------------------~i~~~~~~~-~~~l~s~~~d~----   55 (221)
                      +|.|..+|.. +++.+..+.....                               ....+++.+ .+.++.+..++    
T Consensus       177 ~g~v~a~D~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~  255 (668)
T 1kv9_A          177 RGFVSAYDAD-TGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWN  255 (668)
T ss_dssp             BCEEEEEETT-TCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred             CCEEEEEECC-CCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccc
Confidence            5899999998 7887777652110                               012356766 45666776665    


Q ss_pred             ---------------cEEEEEcCCCccceeeec--cc-------cceeEEEEeCCCC---EEEEecCCCeEEEEECCCCe
Q psy10662         56 ---------------QLKLWNINKPNCLRSFVG--HI-------NDKNFVGLATDGD---YVACGSENNSLYIYYKGLSK  108 (221)
Q Consensus        56 ---------------~v~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~v~iwd~~~~~  108 (221)
                                     .|..+|.++++.+-.++.  |.       .+.....+..+++   .++.++.+|.+.++|..+++
T Consensus       256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~  335 (668)
T 1kv9_A          256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK  335 (668)
T ss_dssp             HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred             cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence                           399999999998876643  21       2223333334665   68899999999999999999


Q ss_pred             eeEEEEeeccc---------ceeEee------------EEEeeC--ceEEEEEecCCCEEEEe-----------------
Q psy10662        109 HMHAYRFDTVR---------SMLESS------------FVGHIN--DKNFVGLATDGDYVACG-----------------  148 (221)
Q Consensus       109 ~~~~~~~~~~~---------~~~~~~------------~~~~~~--~v~~~~~~~~~~~l~~~-----------------  148 (221)
                      .+....+....         ...+..            ..+..+  .-..++++|+..++++.                 
T Consensus       336 ~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~  415 (668)
T 1kv9_A          336 LISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVT  415 (668)
T ss_dssp             EEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCC
T ss_pred             EeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccc
Confidence            98665433211         111000            000000  00125677766655431                 


Q ss_pred             -------------------cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC
Q psy10662        149 -------------------SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG  209 (221)
Q Consensus       149 -------------------~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  209 (221)
                                         ..+|.|..||+.+++.+-.+...                .......+...+.+++.++.||
T Consensus       416 ~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~----------------~~~~~~~~~t~gg~vf~g~~dg  479 (668)
T 1kv9_A          416 RKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP----------------THWNGGTLSTAGNLVFQGTAAG  479 (668)
T ss_dssp             CSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES----------------SSCCCCEEEETTTEEEEECTTS
T ss_pred             ccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC----------------CCCcCceeEeCCCEEEEECCcc
Confidence                               13478889999888766444311                1122233445678899999999


Q ss_pred             eEEEEECCccc
Q psy10662        210 IIKIYVIPIRV  220 (221)
Q Consensus       210 ~i~iw~~~~~~  220 (221)
                      .++.||..+|+
T Consensus       480 ~l~a~d~~tG~  490 (668)
T 1kv9_A          480 QMHAYSADKGE  490 (668)
T ss_dssp             EEEEEETTTCC
T ss_pred             cchhhhhhcCh
Confidence            99999999886

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.93  E-value=1.6e-07  Score=74.69  Aligned_cols=163  Identities=14%  Similarity=0.153  Sum_probs=104.2

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEecc----CceEEEEEecCCcEEEecC------CCcEEEEEcCCCccceeee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHR----KAVSYVKFLNKEDIVSAST------DSQLKLWNINKPNCLRSFV   72 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~l~s~~~------d~~v~~wd~~~~~~~~~~~   72 (221)
                      +..+++++.|+.|..+|.. +++.+..+....    ..+.+--.-.++.++.+..      +|.|..+|.++++.+-.+.
T Consensus       117 ~~~v~v~~~dg~l~alD~~-tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~  195 (668)
T 1kv9_A          117 GDKVYVGTLDGRLIALDAK-TGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY  195 (668)
T ss_dssp             BTEEEEECTTSEEEEEETT-TCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             CCEEEEEcCCCEEEEEECC-CCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence            4567788889999999998 787777766421    1111100011556665543      5899999999998876653


Q ss_pred             ccc-------------------------------cceeEEEEeCCCCEEEEecCCC-------------------eEEEE
Q psy10662         73 GHI-------------------------------NDKNFVGLATDGDYVACGSENN-------------------SLYIY  102 (221)
Q Consensus        73 ~~~-------------------------------~~v~~~~~~~~~~~l~~~~~d~-------------------~v~iw  102 (221)
                      ...                               .....+++.|+..+++.++.++                   .|..+
T Consensus       196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al  275 (668)
T 1kv9_A          196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI  275 (668)
T ss_dssp             SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred             ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence            210                               0112468888888888887766                   39999


Q ss_pred             ECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC---EEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        103 YKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       103 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      |..+++.+..++.......   .+ ....+.....+..+|+   .++.++.+|.++++|..+++.+....+
T Consensus       276 D~~tG~~~W~~~~~~~~~w---d~-~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~  342 (668)
T 1kv9_A          276 RPDTGKLAWHYQVTPGDSW---DF-TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKF  342 (668)
T ss_dssp             CTTTCCEEEEEESSTTCCS---CC-CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred             cCCCCceeeEeecCCCccc---cc-cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccc
Confidence            9999998877642211000   00 0012222233334665   688999999999999999998865543

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.87  E-value=6.9e-07  Score=69.80  Aligned_cols=150  Identities=9%  Similarity=-0.009  Sum_probs=89.6

Q ss_pred             cEEEEEcCCCccceeeecc--c-------cceeEEEEeCCCC---EEEEecCCCeEEEEECCCCeeeEEEEeecc-----
Q psy10662         56 QLKLWNINKPNCLRSFVGH--I-------NDKNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHAYRFDTV-----  118 (221)
Q Consensus        56 ~v~~wd~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-----  118 (221)
                      .|..+|.++++.+-.++..  .       ....-+...++|+   .++.++.+|.+.++|..+++.+....+...     
T Consensus       273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~  352 (571)
T 2ad6_A          273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK  352 (571)
T ss_dssp             EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred             EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence            5999999999887666421  1       1111122334674   577888999999999999999887654321     


Q ss_pred             -----cceeEee--------------EEEeeC--ceEEEEEecCCCEEEEec----------------------------
Q psy10662        119 -----RSMLESS--------------FVGHIN--DKNFVGLATDGDYVACGS----------------------------  149 (221)
Q Consensus       119 -----~~~~~~~--------------~~~~~~--~v~~~~~~~~~~~l~~~~----------------------------  149 (221)
                           ...++..              ..+..+  .-..++++|+..++++..                            
T Consensus       353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~  432 (571)
T 2ad6_A          353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY  432 (571)
T ss_dssp             EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred             cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence                 1111100              000000  002457788777666553                            


Q ss_pred             ---------CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        150 ---------ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       150 ---------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                               .+|.|..||+.+++.+-.+...                ..+....+...+..++.++.||.|+.+|..+|+
T Consensus       433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~----------------~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~  496 (571)
T 2ad6_A          433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK----------------FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK  496 (571)
T ss_dssp             ECTTSTTSCCCEEEEEECTTTCCEEEEEEES----------------SCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             cCccccCCCCCCeEEEEECCCCCEEEEecCC----------------CCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence                     3467888888877765444311                111122222346677778999999999999886


Q ss_pred             C
Q psy10662        221 L  221 (221)
Q Consensus       221 l  221 (221)
                      +
T Consensus       497 ~  497 (571)
T 2ad6_A          497 E  497 (571)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.77  E-value=2.4e-06  Score=67.00  Aligned_cols=104  Identities=10%  Similarity=0.057  Sum_probs=67.9

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCc-------------------------------------e-EEEEEec-CCcEEEe
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKA-------------------------------------V-SYVKFLN-KEDIVSA   51 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~-------------------------------------i-~~~~~~~-~~~l~s~   51 (221)
                      .+|.|+.+|.. +++.+..+......                                     + ..+++.+ .+.++.+
T Consensus       180 ~~g~v~A~D~~-TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g  258 (599)
T 1w6s_A          180 VRGYLTAYDVK-TGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFG  258 (599)
T ss_dssp             CCCEEEEEETT-TCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEE
T ss_pred             CCCeEEEEECC-CCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEe
Confidence            37899999998 77777766532211                                     0 1234443 4555555


Q ss_pred             cCC----------------CcEEEEEcCCCccceeeecccc---------ceeEEEEe-CCC---CEEEEecCCCeEEEE
Q psy10662         52 STD----------------SQLKLWNINKPNCLRSFVGHIN---------DKNFVGLA-TDG---DYVACGSENNSLYIY  102 (221)
Q Consensus        52 ~~d----------------~~v~~wd~~~~~~~~~~~~~~~---------~v~~~~~~-~~~---~~l~~~~~d~~v~iw  102 (221)
                      ..+                +.|..+|.++++.+-.++....         ...-+... .+|   ..++.++.+|.+.++
T Consensus       259 ~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~l  338 (599)
T 1w6s_A          259 TGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTL  338 (599)
T ss_dssp             CCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEE
T ss_pred             CCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEE
Confidence            544                3799999999988766643211         11112222 467   467778999999999


Q ss_pred             ECCCCeeeEEEEe
Q psy10662        103 YKGLSKHMHAYRF  115 (221)
Q Consensus       103 d~~~~~~~~~~~~  115 (221)
                      |.++++.+....+
T Consensus       339 D~~tG~~lw~~~~  351 (599)
T 1w6s_A          339 DRTDGALVSANKL  351 (599)
T ss_dssp             ETTTCCEEEEEES
T ss_pred             ECCCCCEeecccc
Confidence            9999999887654

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.75  E-value=3.1e-06  Score=66.40  Aligned_cols=159  Identities=11%  Similarity=0.116  Sum_probs=99.0

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEE-EEEecCCcEEEec------CCCcEEEEEcCCCccceeeecc
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSY-VKFLNKEDIVSAS------TDSQLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~-~~~~~~~~l~s~~------~d~~v~~wd~~~~~~~~~~~~~   74 (221)
                      |+.++.|+.|.-+|.. +++.+........    .+.+ ... .++.++.++      .++.|+.+|.++++.+-.+...
T Consensus       124 V~v~t~dg~l~AlDa~-TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~  201 (599)
T 1w6s_A          124 ILKTQLDGNVAALNAE-TGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT  201 (599)
T ss_dssp             EEEECTTSEEEEEETT-TCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred             EEEEcCCCEEEEEECC-CCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence            7888889999999997 6777766543220    1211 111 155666655      3899999999999887655322


Q ss_pred             ccc-------------------------------------e-eEEEEeCCCCEEEEecCC----------------CeEE
Q psy10662         75 IND-------------------------------------K-NFVGLATDGDYVACGSEN----------------NSLY  100 (221)
Q Consensus        75 ~~~-------------------------------------v-~~~~~~~~~~~l~~~~~d----------------~~v~  100 (221)
                      ...                                     + ...++.++..+++.+..+                +.|.
T Consensus       202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~  281 (599)
T 1w6s_A          202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF  281 (599)
T ss_dssp             SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred             CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence            110                                     0 134566777777766554                3799


Q ss_pred             EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe-cCC---CEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA-TDG---DYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      .+|.++++.+..++.......   .+.....++ -+... .+|   ..++.++.+|.++++|.++++.+....+
T Consensus       282 Ald~~TG~~~W~~q~~~~d~w---d~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~  351 (599)
T 1w6s_A          282 GRDADTGEAKFGYQKTPHDEW---DYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKL  351 (599)
T ss_dssp             EEETTTCCEEEEEESSTTCSS---CCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred             EEeCCCCceeeEeecCCCccc---cccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccc
Confidence            999999998876632211000   000111111 12222 467   4677889999999999999998876654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.74  E-value=3.5e-06  Score=65.89  Aligned_cols=163  Identities=10%  Similarity=0.080  Sum_probs=99.2

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEE-EEEecCCcEEEecC------CCcEEEEEcCCCccceee
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSY-VKFLNKEDIVSAST------DSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~-~~~~~~~~l~s~~~------d~~v~~wd~~~~~~~~~~   71 (221)
                      +..+++++.|+.|..+|.. +++.+........    .+.+ ... .++.++.++.      ++.|..+|.++++.+-.+
T Consensus       115 ~~~v~v~~~dg~l~alD~~-tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~  192 (571)
T 2ad6_A          115 AGQIVKKQANGHLLALDAK-TGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA  192 (571)
T ss_dssp             TTEEEEECTTSEEEEEETT-TCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEeCCCEEEEEECC-CCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence            4567778889999999997 6777766553210    1211 111 1556666554      799999999999887655


Q ss_pred             eccccc--------------------------------------eeEEEEeCCCCEEEEecCC----------------C
Q psy10662         72 VGHIND--------------------------------------KNFVGLATDGDYVACGSEN----------------N   97 (221)
Q Consensus        72 ~~~~~~--------------------------------------v~~~~~~~~~~~l~~~~~d----------------~   97 (221)
                      ......                                      ...+++.++...++.+..+                +
T Consensus       193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~  272 (571)
T 2ad6_A          193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM  272 (571)
T ss_dssp             ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred             ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence            321110                                      0235666766666555432                3


Q ss_pred             eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC---EEEEecCCCeEEEEEcCCCCceeeeeee
Q psy10662         98 SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHAYRFD  171 (221)
Q Consensus        98 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~  171 (221)
                      .|..+|.++++.+..++.......   .+.....++ .+...++|+   .++.++.+|.++++|..+++.+..+.+.
T Consensus       273 ~v~Ald~~tG~~~W~~~~~~~d~~---d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~  345 (571)
T 2ad6_A          273 TIWGRDLDTGMAKWGYQKTPHDEW---DFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD  345 (571)
T ss_dssp             EEEEEETTTCCEEEEEESSTTCSS---CCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred             EEEEEecCCCcEEEEecCCCCccc---ccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence            589999999998876532210000   000011111 233335774   6778889999999999999887766543

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.73  E-value=2.1e-05  Score=56.98  Aligned_cols=190  Identities=12%  Similarity=0.143  Sum_probs=112.8

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-----Cc--EE--EecC--CCcEEEEEcC--CCccce
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-----ED--IV--SAST--DSQLKLWNIN--KPNCLR   69 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~--l~--s~~~--d~~v~~wd~~--~~~~~~   69 (221)
                      ..+++.....+-+.+||+.  ++.++.+..  +.++.+..-|+     ..  ++  +.-.  +++|.+|++.  +++ +.
T Consensus        40 ~s~ii~t~k~~gL~Vydl~--G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~  114 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSLD--GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ  114 (355)
T ss_dssp             GCEEEEEETTTEEEEEETT--SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred             ccEEEEEcCCCCEEEEcCC--CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence            4556666788899999995  666776653  55666665542     11  33  3333  5789999773  332 33


Q ss_pred             eeec------cc-cceeEEEE--eCC-CC-EEEEecCCCeEEEEECC---CCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662         70 SFVG------HI-NDKNFVGL--ATD-GD-YVACGSENNSLYIYYKG---LSKHMHAYRFDTVRSMLESSFVGHINDKNF  135 (221)
Q Consensus        70 ~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  135 (221)
                      .+..      .. ..+..+++  +|. +. ++++...+|.+..|++.   .++..         .+.++++. ..+.+-.
T Consensus       115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~---------~~lVR~f~-lgsq~Eg  184 (355)
T 3amr_A          115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYIS---------GKKVRAFK-MNSQTEG  184 (355)
T ss_dssp             ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEE---------EEEEEEEE-CSSCEEE
T ss_pred             eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCccc---------ceEEEEec-CCCCcce
Confidence            3311      11 45667777  664 43 67888889999999873   22111         11222222 2356778


Q ss_pred             EEEecCCCEEEEecCCCeEEEEEcCCCC--ceeeeeeecccccccccccccccccceeEEEE--cCCCc-EEEEec-CCC
Q psy10662        136 VGLATDGDYVACGSENNSLYIYYKGLSK--HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW--RQLSR-VLVAAN-SQG  209 (221)
Q Consensus       136 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~~~~-~dg  209 (221)
                      |...+....|+.+-++.-|..++.+...  ....+.         .. ....-...+..+++  .++++ ||++++ .++
T Consensus       185 cvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~---------~~-~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~  254 (355)
T 3amr_A          185 MAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVID---------RA-DGRHLTRDIEGLTIYYAADGKGYLMASSQGNS  254 (355)
T ss_dssp             EEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEE---------EB-SSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred             EEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEE---------Ee-cCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence            8899988899999998776666654222  101111         00 01111224666776  55555 666666 688


Q ss_pred             eEEEEECC
Q psy10662        210 IIKIYVIP  217 (221)
Q Consensus       210 ~i~iw~~~  217 (221)
                      ...+|+.+
T Consensus       255 s~~Vydr~  262 (355)
T 3amr_A          255 SYAIYDRQ  262 (355)
T ss_dssp             EEEEEESS
T ss_pred             EEEEEECC
Confidence            99999986

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.72  E-value=1.6e-06  Score=67.90  Aligned_cols=61  Identities=15%  Similarity=0.091  Sum_probs=44.0

Q ss_pred             CcEEEEEcCCCccceeeec--cc--------cceeEEEEe-CCCC---EEEEecCCCeEEEEECCCCeeeEEEEee
Q psy10662         55 SQLKLWNINKPNCLRSFVG--HI--------NDKNFVGLA-TDGD---YVACGSENNSLYIYYKGLSKHMHAYRFD  116 (221)
Q Consensus        55 ~~v~~wd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~  116 (221)
                      +.|..+|.++++.+-.++.  |.        .++ -+... .+|+   .++.++.+|.+.++|.++++.+..+.+.
T Consensus       291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~  365 (582)
T 1flg_A          291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFV  365 (582)
T ss_dssp             SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred             ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccc
Confidence            5899999999998876642  21        111 12222 4664   6888999999999999999998877553

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.69  E-value=2.9e-05  Score=56.11  Aligned_cols=184  Identities=10%  Similarity=0.025  Sum_probs=105.5

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEec-CCcEEEecC------------------CCcEEEE
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLN-KEDIVSAST------------------DSQLKLW   60 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~-~~~l~s~~~------------------d~~v~~w   60 (221)
                      .|.++...+.|..+|.. ++. +..+..     .......+++.+ ++.+..+..                  ++.|..+
T Consensus        93 ~l~v~d~~~~i~~~d~~-~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~  170 (322)
T 2fp8_A           93 QLYIVDCYYHLSVVGSE-GGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY  170 (322)
T ss_dssp             EEEEEETTTEEEEECTT-CEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred             cEEEEECCCCEEEEeCC-CCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence            34444444557777755 332 222221     113467888888 777665432                  3678888


Q ss_pred             EcCCCccceeeeccccceeEEEEeCCCCEEE-EecCCCeEEEEECCCCee--eEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662         61 NINKPNCLRSFVGHINDKNFVGLATDGDYVA-CGSENNSLYIYYKGLSKH--MHAYRFDTVRSMLESSFVGHINDKNFVG  137 (221)
Q Consensus        61 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~  137 (221)
                      |..+++...... .......++++|+++.+. +-+..+.|.+|++.....  ...+             ..... ...++
T Consensus       171 d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~-------------~~~~g-P~gi~  235 (322)
T 2fp8_A          171 DPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL-------------VKIPN-PGNIK  235 (322)
T ss_dssp             ETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE-------------EECSS-EEEEE
T ss_pred             eCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE-------------EeCCC-CCCeE
Confidence            876665432222 223457799999998554 446678899999874311  1111             11122 67789


Q ss_pred             EecCCCEEEEecC----------CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662        138 LATDGDYVACGSE----------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       138 ~~~~~~~l~~~~~----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  207 (221)
                      ++++|++.++...          .+.|..+|.. ++.+..+.... +          .....+..+++ .++++.++...
T Consensus       236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~-g----------~~~~~~~~~~~-~~g~L~v~~~~  302 (322)
T 2fp8_A          236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPP-P----------FAGEHFEQIQE-HDGLLYIGTLF  302 (322)
T ss_dssp             ECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCT-T----------TTTSCCCEEEE-ETTEEEEECSS
T ss_pred             ECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCC-C----------CccccceEEEE-eCCEEEEeecC
Confidence            9999987666544          4567777753 44444332110 0          00223556666 46776666667


Q ss_pred             CCeEEEEECCc
Q psy10662        208 QGIIKIYVIPI  218 (221)
Q Consensus       208 dg~i~iw~~~~  218 (221)
                      ++.|..+++..
T Consensus       303 ~~~i~~~~~~~  313 (322)
T 2fp8_A          303 HGSVGILVYDK  313 (322)
T ss_dssp             CSEEEEEEC--
T ss_pred             CCceEEEeccc
Confidence            88999999864

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.63  E-value=6.1e-05  Score=56.87  Aligned_cols=199  Identities=9%  Similarity=-0.000  Sum_probs=108.3

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCC----c-EEEEEcCCCccc-eeeeccccc
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDS----Q-LKLWNINKPNCL-RSFVGHIND   77 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~----~-v~~wd~~~~~~~-~~~~~~~~~   77 (221)
                      ..|..+...+.|+.+|+. .+... .+.........+++++++.|+.+...+    . +...+...+... ..+. ....
T Consensus       153 g~Lyv~D~~~~I~~id~~-~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~  229 (433)
T 4hw6_A          153 DDLYWVGQRDAFRHVDFV-NQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARG  229 (433)
T ss_dssp             CEEEEECBTSCEEEEETT-TTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSS
T ss_pred             CEEEEEeCCCCEEEEECC-CCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCC
Confidence            344444444788888875 44433 333344568899999865566555422    1 333332211110 1121 2234


Q ss_pred             eeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EEecCCCeEE
Q psy10662         78 KNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-ACGSENNSLY  155 (221)
Q Consensus        78 v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~  155 (221)
                      ...++++| ++.++++-..++.|..+|..+++....+. .          .+.......++|+|+++.| ++-...+.|+
T Consensus       230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~-~----------~~~~~~~~~ia~dpdG~~LYvad~~~~~I~  298 (433)
T 4hw6_A          230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV-M----------MDTKGSNFHIVWHPTGDWAYIIYNGKHCIY  298 (433)
T ss_dssp             BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-E----------CSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred             CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-c----------cCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence            56788999 67766677778899999987665522220 0          0111223469999999854 4555678899


Q ss_pred             EEEcCC--CCceeeeeeecc-ccc-ccccccccccccceeEEEE---------cCCCcEEEEecCCCeEEEEEC
Q psy10662        156 IYYKGL--SKHMHAYRFDTV-RSM-LERDRNEDDTNEFVSAVCW---------RQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       156 ~~d~~~--~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~~~---------~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      .++...  +.......+... ... ...-......-.....+++         .++|.+.++-...+.|+.++.
T Consensus       299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~  372 (433)
T 4hw6_A          299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP  372 (433)
T ss_dssp             EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred             EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence            988653  221100111100 000 0000000011223567899         778888777777888988874

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.63  E-value=9.7e-06  Score=63.52  Aligned_cols=164  Identities=12%  Similarity=0.083  Sum_probs=98.7

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceE-EEEEecC---C--cEEEec------CCCcEEEEEcCCCc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVS-YVKFLNK---E--DIVSAS------TDSQLKLWNINKPN   66 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~-~~~~~~~---~--~l~s~~------~d~~v~~wd~~~~~   66 (221)
                      +..++.++.|+.|.-+|.. +++.+........    .+. +.....+   +  .++.++      .++.|..+|.++++
T Consensus       117 ~~~v~~~t~dg~l~AlD~~-TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~  195 (582)
T 1flg_A          117 GDKVFFGTLDASVVALNKN-TGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE  195 (582)
T ss_dssp             TTEEEEEETTTEEEEEESS-SCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred             CCEEEEEeCCCEEEEEECC-CCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence            4567778889999999998 7777766653321    111 1111112   1  555554      37899999999988


Q ss_pred             cceeeecccc-----------------------------------------ceeEEEEeCCCCEEEEecC----------
Q psy10662         67 CLRSFVGHIN-----------------------------------------DKNFVGLATDGDYVACGSE----------   95 (221)
Q Consensus        67 ~~~~~~~~~~-----------------------------------------~v~~~~~~~~~~~l~~~~~----------   95 (221)
                      .+-.......                                         .-..+++.|+..+++.+..          
T Consensus       196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r  275 (582)
T 1flg_A          196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR  275 (582)
T ss_dssp             EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred             EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence            7654422100                                         0023456676676665442          


Q ss_pred             ----------C----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe-cCCC---EEEEecCCCeEEEE
Q psy10662         96 ----------N----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA-TDGD---YVACGSENNSLYIY  157 (221)
Q Consensus        96 ----------d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~l~~~~~d~~i~~~  157 (221)
                                |    +.|..+|..+++.+..++.......   .+.....++ -+... .+|+   .++.++.+|.++++
T Consensus       276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~w---d~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~l  351 (582)
T 1flg_A          276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAW---DFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVV  351 (582)
T ss_dssp             SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCS---CCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEE
T ss_pred             ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcc---cccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEE
Confidence                      2    5899999999998877632211000   000111111 12222 4664   78889999999999


Q ss_pred             EcCCCCceeeeeee
Q psy10662        158 YKGLSKHMHAYRFD  171 (221)
Q Consensus       158 d~~~~~~~~~~~~~  171 (221)
                      |.++++.+..+.+.
T Consensus       352 D~~tG~~lw~~~~~  365 (582)
T 1flg_A          352 DRSNGKLQNAFPFV  365 (582)
T ss_dssp             ETTTCCEEEEEESS
T ss_pred             ECCCCCEecccccc
Confidence            99999988776654

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.61  E-value=7.1e-05  Score=56.46  Aligned_cols=143  Identities=8%  Similarity=0.081  Sum_probs=86.3

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecC-CC----cEEEEEcCCCccc--eeeecc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAST-DS----QLKLWNINKPNCL--RSFVGH   74 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~-d~----~v~~wd~~~~~~~--~~~~~~   74 (221)
                      +..|.++...+.|+.+|+. .+.. ..+.........++|++++. |+.+.. ++    .+..++. .+...  ..+. .
T Consensus       149 ~g~Lyv~d~~~~I~~id~~-~~~v-~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~  224 (430)
T 3tc9_A          149 HNHLYLVGEQHPTRLIDFE-KEYV-STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-K  224 (430)
T ss_dssp             EEEEEEEEBTEEEEEEETT-TTEE-EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-E
T ss_pred             CCeEEEEeCCCcEEEEECC-CCEE-EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-c
Confidence            3445555554788888876 4443 33333455688999997554 555543 22    2333443 33222  2222 2


Q ss_pred             ccceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE-EEEecCCC
Q psy10662         75 INDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY-VACGSENN  152 (221)
Q Consensus        75 ~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~  152 (221)
                      ......++++| ++.++++-..++.|..++...+......           . .+.......++|+|++++ +++-...+
T Consensus       225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~-----------~-~~~~~~P~gia~~pdG~~lyv~d~~~~  292 (430)
T 3tc9_A          225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF-----------T-IQDSGWEFHIQFHPSGNYAYIVVVNQH  292 (430)
T ss_dssp             CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE-----------E-CSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred             CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-----------E-cCCCCcceeEEEcCCCCEEEEEECCCC
Confidence            23457888999 6777777777889999998765542111           0 111234678999999995 45555678


Q ss_pred             eEEEEEcCC
Q psy10662        153 SLYIYYKGL  161 (221)
Q Consensus       153 ~i~~~d~~~  161 (221)
                      .|..++...
T Consensus       293 ~I~~~~~d~  301 (430)
T 3tc9_A          293 YILRSDYDW  301 (430)
T ss_dssp             EEEEEEEET
T ss_pred             EEEEEeCCc
Confidence            899988653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.60  E-value=6.8e-05  Score=55.75  Aligned_cols=178  Identities=8%  Similarity=-0.042  Sum_probs=105.1

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCC
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD   88 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~   88 (221)
                      ..+.|+..++. .... ..+......+..++|.+ ++.|+ +-...+.|..+++........+.........+++.+.+.
T Consensus        94 ~~~~I~~i~~~-~~~~-~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g  171 (386)
T 3v65_B           94 NRIDIRQVLPH-RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD  171 (386)
T ss_dssp             CBSCEEEECTT-SCCC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT
T ss_pred             cCccceeeccC-CCcE-EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC
Confidence            34567777776 3332 22333445688999995 55544 555678899999876543333322233457788887544


Q ss_pred             -EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CC-CeEEEEEcCCCCce
Q psy10662         89 -YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-EN-NSLYIYYKGLSKHM  165 (221)
Q Consensus        89 -~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~~d~~~~~~~  165 (221)
                       ++++-...+.|.+.++...... .+            ..........++++|.+..|+... .. +.|..+++......
T Consensus       172 ~lY~~d~~~~~I~~~~~dg~~~~-~l------------~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~  238 (386)
T 3v65_B          172 KLYWTDSGTSRIEVANLDGAHRK-VL------------LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR  238 (386)
T ss_dssp             EEEEEETTTTEEEECBTTSCSCE-EE------------ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred             eEEEEcCCCCeEEEEeCCCCceE-Ee------------ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE
Confidence             5566666778888877643221 11            112234568899998766555444 33 67777776543221


Q ss_pred             eeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        166 HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      ....               ..-...+.++|+|++..|+.+ +..+.|..+++..
T Consensus       239 ~~~~---------------~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG  277 (386)
T 3v65_B          239 IIAD---------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG  277 (386)
T ss_dssp             EEEC---------------SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred             EEEE---------------CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence            1110               112245789999866655544 4577888888764

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.60  E-value=2.5e-05  Score=62.19  Aligned_cols=109  Identities=10%  Similarity=0.054  Sum_probs=65.1

Q ss_pred             CCceEEEEeCCC-----------eEEEEEecCCc-eeeEEEEe-ccCceEEEEEec-CCcEEEec-CCCcEEEEEcCCCc
Q psy10662          2 NSCHLAFGSADH-----------CVHYYDLRNTK-EALAVFKG-HRKAVSYVKFLN-KEDIVSAS-TDSQLKLWNINKPN   66 (221)
Q Consensus         2 ~~~~l~~~~~dg-----------~i~i~~~~~~~-~~~~~~~~-~~~~i~~~~~~~-~~~l~s~~-~d~~v~~wd~~~~~   66 (221)
                      ++++++.|+.++           .+.+||+.+.. ..+..+.. +.....++++.. +..++.|+ .+..+.+||..+.+
T Consensus       197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~  276 (656)
T 1k3i_A          197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS  276 (656)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred             CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence            678888887543           57889887322 22223322 223344566665 45566776 35689999987764


Q ss_pred             cceeeecc-ccceeEEEEeCCCCEEEEec-CC-----CeEEEEECCCCeee
Q psy10662         67 CLRSFVGH-INDKNFVGLATDGDYVACGS-EN-----NSLYIYYKGLSKHM  110 (221)
Q Consensus        67 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~d-----~~v~iwd~~~~~~~  110 (221)
                      ....-..+ ...-.+++..+++++++.|+ .+     ..+.+||..+.+..
T Consensus       277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~  327 (656)
T 1k3i_A          277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT  327 (656)
T ss_dssp             EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred             eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence            33221111 11223455667889888888 34     46899999876643

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.58  E-value=3.5e-07  Score=67.34  Aligned_cols=106  Identities=7%  Similarity=-0.078  Sum_probs=76.5

Q ss_pred             EEEecCCC----cEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----------CCCeEEEEECCCCeeeEEE
Q psy10662         48 IVSASTDS----QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----------ENNSLYIYYKGLSKHMHAY  113 (221)
Q Consensus        48 l~s~~~d~----~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~  113 (221)
                      +++-..++    .|.++|..+++.+..+.....+  .+.++|++++++.+.          .++.|.+||+.+.+.+.++
T Consensus        35 yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I  112 (368)
T 1mda_H           35 HITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI  112 (368)
T ss_dssp             EEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred             EEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE
Confidence            44544455    7889999999999888655555  799999999887765          3688999999999998776


Q ss_pred             EeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC--CCeEEE--EEcCC
Q psy10662        114 RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE--NNSLYI--YYKGL  161 (221)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~--~d~~~  161 (221)
                      .......     + ........++++|||++++++..  +..+.+  +|+.+
T Consensus       113 ~v~~~~~-----~-~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          113 ELPDAPR-----F-SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             EETTSCS-----C-CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             ECCCccc-----c-ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence            2110000     0 00123557899999999998875  467888  88866

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.54  E-value=8.3e-05  Score=53.70  Aligned_cols=182  Identities=9%  Similarity=-0.022  Sum_probs=106.8

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcE-EEecCCCcEEEEEcCCC---cccee-eecccccee
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDI-VSASTDSQLKLWNINKP---NCLRS-FVGHINDKN   79 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l-~s~~~d~~v~~wd~~~~---~~~~~-~~~~~~~v~   79 (221)
                      |+.+ ..+.|+..|+. ..+....+. ....+..++|++ ++.| ++-..++.|..+++...   ..... +........
T Consensus         4 ll~~-~~~~I~~i~~~-~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~   80 (316)
T 1ijq_A            4 LFFT-NRHEVRKMTLD-RSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD   80 (316)
T ss_dssp             EEEE-CBSSEEEEETT-SCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred             EEEE-CCCeEEEEECC-CcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence            4444 34578999987 444333333 445678999996 4554 45556789999998751   22222 222223457


Q ss_pred             EEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-C-CeEEE
Q psy10662         80 FVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-N-NSLYI  156 (221)
Q Consensus        80 ~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~~  156 (221)
                      .+++.+.+ +++++-...+.|.+.++..... ..+            ..........++++|.+..|+.... . +.|..
T Consensus        81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~------------~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~  147 (316)
T 1ijq_A           81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTL------------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK  147 (316)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEE------------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred             EEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEE------------EECCCCCcceEEeCCCCCEEEEEccCCCCeEEE
Confidence            88998644 4556666778899998764332 111            1112245678999986665554443 2 67877


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      +++..... ..+.              ...-...+.++++|++..|+.+ +..+.|..+++..
T Consensus       148 ~~~dG~~~-~~~~--------------~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg  195 (316)
T 1ijq_A          148 GGLNGVDI-YSLV--------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  195 (316)
T ss_dssp             EETTSCCE-EEEE--------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EcCCCCCe-EEEE--------------ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence            77643221 1110              0112346789999876666554 4577899998864

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.54  E-value=8.3e-05  Score=53.36  Aligned_cols=195  Identities=8%  Similarity=-0.046  Sum_probs=107.2

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecC--CC-cEEEEEcCCCccceeeec-ccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAST--DS-QLKLWNINKPNCLRSFVG-HIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~--d~-~v~~wd~~~~~~~~~~~~-~~~   76 (221)
                      |+++++++-..++.|..||.. . .....+. .......+++.+++.++.+..  ++ .|..+|..+++....... ...
T Consensus        41 ~~g~lyv~d~~~~~I~~~d~~-g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~  117 (306)
T 2p4o_A           41 PDGTIFVTNHEVGEIVSITPD-G-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAI  117 (306)
T ss_dssp             TTSCEEEEETTTTEEEEECTT-C-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCS
T ss_pred             CCCCEEEEeCCCCeEEEECCC-C-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCcc
Confidence            466766666677888888876 2 3333333 345688999998666665542  22 466677777654322211 112


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCee-eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE-ecCCCeE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC-GSENNSL  154 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i  154 (221)
                      ....++..+++..+++-..++.|..+|...++. +...  ... .... .....-.....+  +|+++.|++ -...+.|
T Consensus       118 ~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~--~~~-~~~~-~~~~~~~~pngi--s~dg~~lyv~d~~~~~I  191 (306)
T 2p4o_A          118 FLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLE--HPM-LARS-NSESVFPAANGL--KRFGNFLYVSNTEKMLL  191 (306)
T ss_dssp             CEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEE--CGG-GSCS-STTCCSCSEEEE--EEETTEEEEEETTTTEE
T ss_pred             ccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEE--CCc-cccc-cccCCCCcCCCc--CcCCCEEEEEeCCCCEE
Confidence            234445555555555555688899988875432 1110  000 0000 000111123445  788875544 4557889


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ..|++.....+....      .   ..    .......++++++|++.++....+.|.+++..
T Consensus       192 ~~~~~~~~g~~~~~~------~---~~----~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~  241 (306)
T 2p4o_A          192 LRIPVDSTDKPGEPE------I---FV----EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD  241 (306)
T ss_dssp             EEEEBCTTSCBCCCE------E---EE----ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred             EEEEeCCCCCCCccE------E---Ee----ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence            999986421110000      0   00    01234678999999887777677889988865

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.53  E-value=0.00011  Score=54.54  Aligned_cols=184  Identities=8%  Similarity=-0.110  Sum_probs=101.4

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL   83 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~   83 (221)
                      +.+-...+.|..+++. .......+.........+++.+ ++. +++-...+.|.+.++........+.........+++
T Consensus       131 y~~D~~~~~I~r~~~~-g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giav  209 (386)
T 3v65_B          131 FWSDVTLDRILRANLN-GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL  209 (386)
T ss_dssp             EEEETTTTEEEEEETT-SCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEE
T ss_pred             EEEeCCCCcEEEEecC-CCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEE
Confidence            3333345566666665 2222222222223456777775 444 455566778888887644332223223345688999


Q ss_pred             eCCCCEEE-EecCC-CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE-ecCCCeEEEEEcC
Q psy10662         84 ATDGDYVA-CGSEN-NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC-GSENNSLYIYYKG  160 (221)
Q Consensus        84 ~~~~~~l~-~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~  160 (221)
                      .|.+..++ +-... +.|..+++........             ..........++++|++..|.. -...+.|..+|+.
T Consensus       210 dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~-------------~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d  276 (386)
T 3v65_B          210 HPMEGTIYWTDWGNTPRIEASSMDGSGRRII-------------ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD  276 (386)
T ss_dssp             ETTTTEEEEEECSSSCEEEEEETTSCSCEEE-------------ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred             EcCCCeEEEeccCCCCEEEEEeCCCCCcEEE-------------EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence            98766544 43344 6788877754322111             1112334678999986665544 4456789888876


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .......+.               ........+++ ..+.++++-...+.|..++..+|
T Consensus       277 G~~~~~~~~---------------~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G  319 (386)
T 3v65_B          277 GSHRKAVIS---------------QGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG  319 (386)
T ss_dssp             SCSCEEEEC---------------SSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCeeEEEEE---------------CCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence            432211111               01123456777 34566666667888888885444

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.53  E-value=0.0001  Score=53.99  Aligned_cols=178  Identities=8%  Similarity=-0.047  Sum_probs=105.0

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCC-
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG-   87 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~-   87 (221)
                      ..+.|+..++. .... ..+......+..++|++ ++.|+ +-...+.|..+++........+.........+++.+.+ 
T Consensus        51 ~~~~I~~i~~~-g~~~-~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g  128 (349)
T 3v64_C           51 NRIDIRQVLPH-RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD  128 (349)
T ss_dssp             CBSCEEEECTT-SCCE-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred             cccceEEEeCC-CCee-EEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCC
Confidence            34457777765 3332 22322345578999995 55544 54567889999987654333332223345788998754 


Q ss_pred             CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCC-CeEEEEEcCCCCce
Q psy10662         88 DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SEN-NSLYIYYKGLSKHM  165 (221)
Q Consensus        88 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-~~i~~~d~~~~~~~  165 (221)
                      .++++-...+.|.+.++...... .+            ..........++++|.+..|... ... +.|..+++......
T Consensus       129 ~ly~~d~~~~~I~~~~~dG~~~~-~l------------~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~  195 (349)
T 3v64_C          129 KLYWTDSGTSRIEVANLDGAHRK-VL------------LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR  195 (349)
T ss_dssp             EEEEEETTTTEEEEEETTSCSCE-EE------------ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred             eEEEEcCCCCeEEEEcCCCCceE-EE------------EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE
Confidence            45566666788999887643321 11            11122456789999865555444 344 67887776533221


Q ss_pred             eeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        166 HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      ...               ...-...+.++++|++..|+.+ +..+.|..+++..
T Consensus       196 ~~~---------------~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG  234 (349)
T 3v64_C          196 IIA---------------DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG  234 (349)
T ss_dssp             ESC---------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EEE---------------ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence            111               0112346789999866655544 4577899888764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.52  E-value=0.00011  Score=53.84  Aligned_cols=179  Identities=8%  Similarity=-0.110  Sum_probs=99.5

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCC
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD   88 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~   88 (221)
                      ..+.|..+++. .......+.........+++.+ ++. +++-...+.|.+.++........+.........+++.|.+.
T Consensus        93 ~~~~I~r~~~~-g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g  171 (349)
T 3v64_C           93 TLDRILRANLN-GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG  171 (349)
T ss_dssp             TTTEEEEEETT-SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTT
T ss_pred             cCCceEEEecC-CCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcC
Confidence            44556666655 2222222222223456788875 444 45556678899999865433222222334568999998665


Q ss_pred             EE-EEecCC-CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCce
Q psy10662         89 YV-ACGSEN-NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHM  165 (221)
Q Consensus        89 ~l-~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~  165 (221)
                      .+ ++-... +.|...++...... .+            ..........++++|++..|..+ ...+.|..+|+......
T Consensus       172 ~ly~td~~~~~~I~r~~~dG~~~~-~~------------~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~  238 (349)
T 3v64_C          172 TIYWTDWGNTPRIEASSMDGSGRR-II------------ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK  238 (349)
T ss_dssp             EEEEEECSSSCEEEEEETTSCSCE-ES------------CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             eEEEeccCCCCEEEEEeCCCCCcE-EE------------EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE
Confidence            44 444444 77888877543211 10            01123456789999866655544 45678999987643221


Q ss_pred             eeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        166 HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ..+.               ........+++ ..+.++++-...+.|..++..+|
T Consensus       239 ~~~~---------------~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G  276 (349)
T 3v64_C          239 AVIS---------------QGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG  276 (349)
T ss_dssp             EEEC---------------SSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred             EEEe---------------CCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCC
Confidence            1111               01123456776 34566666666788888875444

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.49  E-value=0.00015  Score=54.13  Aligned_cols=179  Identities=8%  Similarity=-0.047  Sum_probs=107.2

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCc----cceeeeccccceeEEEEe
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPN----CLRSFVGHINDKNFVGLA   84 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~----~~~~~~~~~~~v~~~~~~   84 (221)
                      ..+.|+..++. ...... +......+..|+|++ ++.|+ +-...+.|+.+++....    ....+.........+++.
T Consensus        90 ~~~~I~~i~l~-~~~~~~-~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD  167 (400)
T 3p5b_L           90 NRHEVRKMTLD-RSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD  167 (400)
T ss_dssp             ETTEEEEECTT-SCSCEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEE
T ss_pred             ccceeEEEccC-CcceeE-eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEE
Confidence            45688888887 333222 333456788999996 45544 44567889999886521    222222233456788998


Q ss_pred             C-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec--CCCeEEEEEcCC
Q psy10662         85 T-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGL  161 (221)
Q Consensus        85 ~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~  161 (221)
                      + .++++++-...+.|.+.++........             +.........++++|.+..|+...  ..+.|...++..
T Consensus       168 ~~~~~lY~~d~~~~~I~~~~~~g~~~~~l-------------~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG  234 (400)
T 3p5b_L          168 WIHSNIYWTDSVLGTVSVADTKGVKRKTL-------------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG  234 (400)
T ss_dssp             TTTTEEEEEETTTTEEEEECTTTCSEEEE-------------EECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred             ecCCceEEEECCCCeEEEEeCCCCceEEE-------------EeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence            7 455566666778899888765433211             122234577899999666555444  236787777654


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCcc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPIR  219 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~  219 (221)
                      ........               ..-...+.+++++++..|+.+ +..+.|..+++...
T Consensus       235 ~~~~~~~~---------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~  278 (400)
T 3p5b_L          235 VDIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG  278 (400)
T ss_dssp             CSCEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CccEEEEE---------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence            33221110               112346889999877666655 45778888887643

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.48  E-value=1.8e-05  Score=63.94  Aligned_cols=103  Identities=12%  Similarity=0.101  Sum_probs=63.0

Q ss_pred             CCCceEEEEeC-C----CeEEEEEecCCc-eeeE-EEEeccCceEEEEEecCC-cEEEecCC-----CcEEEEEcCCCcc
Q psy10662          1 MNSCHLAFGSA-D----HCVHYYDLRNTK-EALA-VFKGHRKAVSYVKFLNKE-DIVSASTD-----SQLKLWNINKPNC   67 (221)
Q Consensus         1 ~~~~~l~~~~~-d----g~i~i~~~~~~~-~~~~-~~~~~~~~i~~~~~~~~~-~l~s~~~d-----~~v~~wd~~~~~~   67 (221)
                      |||++||.+.. +    ..|+++|+. ++ +.+. .+..   ....++|+|++ .|+....+     ..|..+++.+++.
T Consensus       184 PDG~~lAy~~~~~G~~~~~l~v~dl~-~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~  259 (751)
T 2xe4_A          184 PEHDLVAFSVDMSGNEVYTIEFKRIS-DPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS  259 (751)
T ss_dssp             TTTCEEEEEEESSSSSCEEEEEEETT-CTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG
T ss_pred             CCCCEEEEEEeCCCCceEEEEEEECC-CCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch
Confidence            68988886543 2    259999998 44 4221 1221   13567899865 46555444     3588888877643


Q ss_pred             c--eeee-ccccceeEEEEeCCCCEEEEec---CCCeEEEEECCCC
Q psy10662         68 L--RSFV-GHINDKNFVGLATDGDYVACGS---ENNSLYIYYKGLS  107 (221)
Q Consensus        68 ~--~~~~-~~~~~v~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~  107 (221)
                      .  ..+. ........+.|+|+|++|+..+   ....|.++|+.++
T Consensus       260 ~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          260 EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            2  2222 2223456789999999876554   2346778888764

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.41  E-value=5.8e-05  Score=56.96  Aligned_cols=154  Identities=9%  Similarity=0.080  Sum_probs=93.8

Q ss_pred             ceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecC-CC----eEEEEECCCCe
Q psy10662         36 AVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSE-NN----SLYIYYKGLSK  108 (221)
Q Consensus        36 ~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~v~iwd~~~~~  108 (221)
                      ....|+++|  ++.|+.+...+.|+.+|+..+...... ........++|++++++|+.+.. ++    .+...+. .+.
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~  215 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG  215 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence            357888885  466666655588999998765543333 34455789999999995554443 22    2333332 121


Q ss_pred             eeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662        109 HMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN  187 (221)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (221)
                      ...           ...+. .......++++| ++.++++-..++.|..++...........             . +..
T Consensus       216 ~~~-----------~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~-------------~-~~~  269 (430)
T 3tc9_A          216 FKV-----------ITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT-------------I-QDS  269 (430)
T ss_dssp             SCS-----------EEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE-------------C-SSS
T ss_pred             eee-----------eeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE-------------c-CCC
Confidence            110           01111 234466788999 77777776678899999987554321111             0 111


Q ss_pred             cceeEEEEcCCCcEEE-EecCCCeEEEEECC
Q psy10662        188 EFVSAVCWRQLSRVLV-AANSQGIIKIYVIP  217 (221)
Q Consensus       188 ~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~  217 (221)
                      .....++|+|+|++|+ +-...+.|..++..
T Consensus       270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             CcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            3457899999999554 44568889988765

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.39  E-value=0.00023  Score=58.00  Aligned_cols=190  Identities=11%  Similarity=0.099  Sum_probs=115.5

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEe-------ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec-----
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKG-------HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG-----   73 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~-----   73 (221)
                      |-.|+.++-|..|+.. ... ...+..       ....|.++...+++.|..|+.++-|..||..+++.......     
T Consensus       323 lWigt~~~Gl~~~~~~-~~~-~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~  400 (795)
T 4a2l_A          323 MWLGTYFGGLNYYHPI-RNR-FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESA  400 (795)
T ss_dssp             EEEEESSSCEEEECGG-GGS-SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC-----
T ss_pred             EEEEECCCCeEEeCCC-ccc-ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcc
Confidence            4456666677778765 222 222221       23468999888888899999888899999876654322111     


Q ss_pred             ---cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         74 ---HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        74 ---~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                         ....|.++...+++..+..|+.++-|..+|..+++... +  .....      ......|.++...++|++.+.. .
T Consensus       401 ~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~--~~~~~------~l~~~~v~~i~~d~~g~lwigt-~  470 (795)
T 4a2l_A          401 RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-F--NQRNS------QLVNENVYAILPDGEGNLWLGT-L  470 (795)
T ss_dssp             -CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-E--CTTTS------CCSCSCEEEEEECSSSCEEEEE-S
T ss_pred             cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-e--ecCCC------CcCCCeeEEEEECCCCCEEEEe-c
Confidence               13568899888888846666666669999988765422 1  10000      0123568888888888755544 4


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      + -+..||..+++... +.  .. .     ....-....|.++...++|++.+... +| +..|+..++
T Consensus       471 ~-Gl~~~~~~~~~~~~-~~--~~-~-----~~~~~~~~~i~~i~~d~~g~lWigt~-~G-l~~~~~~~~  527 (795)
T 4a2l_A          471 S-ALVRFNPEQRSFTT-IE--KE-K-----DGTPVVSKQITTLFRDSHKRLWIGGE-EG-LSVFKQEGL  527 (795)
T ss_dssp             S-CEEEEETTTTEEEE-CC--BC-T-----TCCBCCCCCEEEEEECTTCCEEEEES-SC-EEEEEEETT
T ss_pred             C-ceeEEeCCCCeEEE-cc--cc-c-----cccccCCceEEEEEECCCCCEEEEeC-Cc-eEEEeCCCC
Confidence            4 48888876653321 10  00 0     00011235688999999988766554 44 777776543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.36  E-value=7.6e-05  Score=53.66  Aligned_cols=174  Identities=10%  Similarity=0.095  Sum_probs=106.9

Q ss_pred             ccCceEEEEEec-CCcEEEec-CCCcEEEEEcCCCcccee-eec----c--ccceeEEEE---eCCCCEEEEec------
Q psy10662         33 HRKAVSYVKFLN-KEDIVSAS-TDSQLKLWNINKPNCLRS-FVG----H--INDKNFVGL---ATDGDYVACGS------   94 (221)
Q Consensus        33 ~~~~i~~~~~~~-~~~l~s~~-~d~~v~~wd~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~------   94 (221)
                      ......+++|++ ++.+..++ ..++|..||...+..... +..    .  ...+..+.|   .|++.++++..      
T Consensus        11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~   90 (334)
T 2p9w_A           11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN   90 (334)
T ss_dssp             TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred             cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence            334456788985 55555554 799999999875533222 221    1  113578999   68877776533      


Q ss_pred             -------CCCeEEEEECC---CCeeeEEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEecCC-CeEEEEEcCCC
Q psy10662         95 -------ENNSLYIYYKG---LSKHMHAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACGSEN-NSLYIYYKGLS  162 (221)
Q Consensus        95 -------~d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~d~~~~  162 (221)
                             .+..|..||+.   +++.+............. ...+ .......++..++|+..++++.. +.|...+....
T Consensus        91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~-~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~  169 (334)
T 2p9w_A           91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFE-KKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK  169 (334)
T ss_dssp             TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHH-HHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred             ccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccc-ccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence                   26779999998   777766543211000000 0000 11236789999999999988888 88777665433


Q ss_pred             CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        163 KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                       ....+....         .........+.++++|+|+.|++...+|.|..+|+.
T Consensus       170 -~~~~~~~~~---------~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~  214 (334)
T 2p9w_A          170 -TVSTFAWES---------GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS  214 (334)
T ss_dssp             -CEEEEEECC---------CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred             -EEeeeeecC---------CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence             222221111         001122346789999999988888779999999975

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.34  E-value=0.00023  Score=49.51  Aligned_cols=199  Identities=7%  Similarity=0.041  Sum_probs=113.7

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCccc---eeee------
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNCL---RSFV------   72 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~---~~~~------   72 (221)
                      .++++...++.|...|..  ++.++.+.- -....-.|++.+++.++ +.-.++.+.++++.....+   ....      
T Consensus        40 ~L~aV~d~~~~I~~ld~~--g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~  117 (255)
T 3qqz_A           40 TLFSTINKPAAIVEMTTN--GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQES  117 (255)
T ss_dssp             EEEEEEETTEEEEEEETT--CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSC
T ss_pred             EEEEEECCCCeEEEEeCC--CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccc
Confidence            455567778888888875  666666642 22467888888766654 4445778889887654321   1111      


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECC---CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEe
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKG---LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACG  148 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~  148 (221)
                      ..+.....++|+|.++.|+++.+.....+|.+.   ..+.+.... +...   ..  ......+..++++|. +++++..
T Consensus       118 ~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~-~~~~---~~--~~~~~d~S~l~~dp~tg~lliLS  191 (255)
T 3qqz_A          118 PTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISK-DKAL---QR--QFTLDDVSGAEFNQQKNTLLVLS  191 (255)
T ss_dssp             CCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEE-CHHH---HH--TCCSSCCCEEEEETTTTEEEEEE
T ss_pred             cccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeec-chhh---cc--ccccCCceeEEEcCCCCeEEEEE
Confidence            123346899999998877666665545555443   111111110 0000   00  011234678999984 4566677


Q ss_pred             cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ...+.+..+|.. ++.+..+.......      .+...-...-.++|.++|++.++ ++.+.++.+.-..
T Consensus       192 ~~s~~L~~~d~~-g~~~~~~~L~~g~~------~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~~  253 (255)
T 3qqz_A          192 HESRALQEVTLV-GEVIGEMSLTKGSR------GLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQS  253 (255)
T ss_dssp             TTTTEEEEECTT-CCEEEEEECSTTGG------GCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC--
T ss_pred             CCCCeEEEEcCC-CCEEEEEEcCCccC------CcccccCCCCeeEECCCCCEEEE-cCCceEEEEEecC
Confidence            778889999865 44555554332110      01011123568999999985555 6777777665443

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.32  E-value=0.00033  Score=50.59  Aligned_cols=180  Identities=13%  Similarity=0.045  Sum_probs=106.4

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccce-eeeccccceeEEEEeCC-
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLR-SFVGHINDKNFVGLATD-   86 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~-   86 (221)
                      ....|+..++.........+-.......++.|.+ ++. +++-...+.|..+++....... .+...-.....+++.+. 
T Consensus        11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~   90 (318)
T 3sov_A           11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG   90 (318)
T ss_dssp             CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred             ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence            3568999999843211122221233567899986 455 4455667889999987654222 22222234678889874 


Q ss_pred             CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec--CCCeEEEEEcCCCCc
Q psy10662         87 GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKH  164 (221)
Q Consensus        87 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~  164 (221)
                      +.++++-...+.|.++++..... ..+            ..........++++|.+..|+...  ..+.|...++.-...
T Consensus        91 g~ly~~d~~~~~I~~~~~dG~~~-~~l------------~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~  157 (318)
T 3sov_A           91 EKLYWTDSETNRIEVSNLDGSLR-KVL------------FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR  157 (318)
T ss_dssp             TEEEEEETTTTEEEEEETTSCSC-EEE------------ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             CeEEEEECCCCEEEEEECCCCcE-EEE------------EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence            45556666778899998764322 111            112234567899998765555544  357787777653221


Q ss_pred             eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      .....               ..-...+.++++|++..|+.+ +..+.|..+++..
T Consensus       158 ~~~~~---------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG  197 (318)
T 3sov_A          158 FIIIN---------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG  197 (318)
T ss_dssp             EEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EEEEE---------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence            11110               112245789999866655554 4578899998864

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.32  E-value=2.8e-05  Score=62.90  Aligned_cols=114  Identities=13%  Similarity=0.097  Sum_probs=69.7

Q ss_pred             ceEEEEEe-cCCc-EE-EecCC----CcEEEEEcCCC-ccceeeeccccceeEEEEeCCCCEEEEecCC-----CeEEEE
Q psy10662         36 AVSYVKFL-NKED-IV-SASTD----SQLKLWNINKP-NCLRSFVGHINDKNFVGLATDGDYVACGSEN-----NSLYIY  102 (221)
Q Consensus        36 ~i~~~~~~-~~~~-l~-s~~~d----~~v~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iw  102 (221)
                      .+...+|+ |++. |+ +...+    ..|+++|+.++ +.+...  -......+.|+||++.|+....+     ..|..+
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~  252 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH  252 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence            57889999 8765 44 22222    35999999988 633211  11224578999999877766554     257777


Q ss_pred             ECCCCeeeEEEEeecccceeEeeEE-EeeCceEEEEEecCCCEEEEecC---CCeEEEEEcCCC
Q psy10662        103 YKGLSKHMHAYRFDTVRSMLESSFV-GHINDKNFVGLATDGDYVACGSE---NNSLYIYYKGLS  162 (221)
Q Consensus       103 d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~  162 (221)
                      ++.+++.....           .+. ........+.|+|||++|+....   ...|+++|+.++
T Consensus       253 ~lgt~~~~~~l-----------v~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          253 VMGKLQSEDVC-----------LYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             ETTSCGGGCEE-----------EEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             ECCCCchhcEE-----------EEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            77665321111           011 11223457889999998876553   346777887654

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.29  E-value=0.00079  Score=54.86  Aligned_cols=190  Identities=9%  Similarity=-0.004  Sum_probs=113.8

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEE---------eccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeee--
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFK---------GHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFV--   72 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~--   72 (221)
                      .|-.|..++-|..|+.. +++. ..+.         .....|.++...+++. |..|+.++-+..||..+++......  
T Consensus       369 ~lWiGt~~~Gl~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~  446 (795)
T 4a2l_A          369 NLWIGTNDGGLNLYNPI-TQRF-TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRN  446 (795)
T ss_dssp             CEEEEESSSCEEEECTT-TCCE-EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTT
T ss_pred             CEEEEECCCCeEEEcCC-CCcE-EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCC
Confidence            34456667678888875 3322 2221         1235688998887777 8888888889999987765432211  


Q ss_pred             --ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         73 --GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        73 --~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                        .....|.++...+++.+.+... +| +..||..+++.....   ....    ...-....|.++...++|++.+.. .
T Consensus       447 ~~l~~~~v~~i~~d~~g~lwigt~-~G-l~~~~~~~~~~~~~~---~~~~----~~~~~~~~i~~i~~d~~g~lWigt-~  516 (795)
T 4a2l_A          447 SQLVNENVYAILPDGEGNLWLGTL-SA-LVRFNPEQRSFTTIE---KEKD----GTPVVSKQITTLFRDSHKRLWIGG-E  516 (795)
T ss_dssp             SCCSCSCEEEEEECSSSCEEEEES-SC-EEEEETTTTEEEECC---BCTT----CCBCCCCCEEEEEECTTCCEEEEE-S
T ss_pred             CCcCCCeeEEEEECCCCCEEEEec-Cc-eeEEeCCCCeEEEcc---cccc----ccccCCceEEEEEECCCCCEEEEe-C
Confidence              1235688998888887655443 54 888998776542210   0000    000123568888888888765544 4


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                       +-+..||..+...  .+.....        ........|.++..+++|++.++.. .| |..|+..++
T Consensus       517 -~Gl~~~~~~~~~~--~~~~~~~--------~~~l~~~~i~~i~~d~~g~lWigT~-~G-l~~~d~~~~  572 (795)
T 4a2l_A          517 -EGLSVFKQEGLDI--QKASILP--------VSNVTKLFTNCIYEASNGIIWVGTR-EG-FYCFNEKDK  572 (795)
T ss_dssp             -SCEEEEEEETTEE--EECCCSC--------SCGGGGSCEEEEEECTTSCEEEEES-SC-EEEEETTTT
T ss_pred             -CceEEEeCCCCeE--EEecCCC--------CCCCCCCeeEEEEECCCCCEEEEeC-CC-ceeECCCCC
Confidence             4588888766543  1210000        0011345688999999998666544 34 677877654

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.28  E-value=0.00026  Score=57.57  Aligned_cols=191  Identities=9%  Similarity=0.053  Sum_probs=111.7

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEE---EeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeee--cccccee
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVF---KGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV--GHINDKN   79 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~--~~~~~v~   79 (221)
                      .|-.|..++-|..|+.. ++......   ......|.++...+++.|..|+.++-+..+|..+++......  .....|.
T Consensus       375 ~lWigt~~~Gl~~~~~~-~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~  453 (781)
T 3v9f_A          375 KLWIGTDGGGINVFENG-KRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVR  453 (781)
T ss_dssp             CEEEEEBSSCEEEEETT-EEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEE
T ss_pred             CEEEEeCCCcEEEEECC-CCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEE
Confidence            34455555667778765 22221111   123457889888777888888887789999987665432211  1245688


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      ++...+++.+.+. +.. -|..+|..+++......  ....      ......|.++...++|++.+ |+.++-+..||.
T Consensus       454 ~i~~d~~g~lwig-t~~-Gl~~~~~~~~~~~~~~~--~~~~------~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~  522 (781)
T 3v9f_A          454 VFYEDKNKKIWIG-THA-GVFVIDLASKKVIHHYD--TSNS------QLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTP  522 (781)
T ss_dssp             EEEECTTSEEEEE-ETT-EEEEEESSSSSCCEEEC--TTTS------SCSCSCEEEEEECTTCCEEE-EESSSCEEEECT
T ss_pred             EEEECCCCCEEEE-ECC-ceEEEeCCCCeEEeccc--Cccc------ccccceeEEEEEcCCCCEEE-EEcCCCEEEEeC
Confidence            8888887765444 444 58889987655432110  0000      01135688888888887555 444334777876


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+.+.. .+.  .       ...  -....|.++...++|++.++.. +|.+..|+..+++
T Consensus       523 ~~~~~~-~~~--~-------~~~--l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~  570 (781)
T 3v9f_A          523 DMQLVR-KFN--Q-------YEG--FCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFD  570 (781)
T ss_dssp             TCCEEE-EEC--T-------TTT--CSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCC
T ss_pred             CCCeEE-Ecc--C-------CCC--CCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCc
Confidence            554321 111  0       001  1234688999988888666554 6765777776543

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.27  E-value=0.00046  Score=49.81  Aligned_cols=189  Identities=7%  Similarity=-0.123  Sum_probs=104.8

Q ss_pred             eEEEEeCCCeEEEEEecCC---ceeeEEEEeccCceEEEEEec-CCcE-EEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662          5 HLAFGSADHCVHYYDLRNT---KEALAVFKGHRKAVSYVKFLN-KEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~~~i~~~~~~~-~~~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      ++.+-...+.|..+++...   ......+...-.....+++.+ ++.| ++-...+.|.+.++........+........
T Consensus        44 ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~  123 (316)
T 1ijq_A           44 IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR  123 (316)
T ss_dssp             EEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEE
T ss_pred             EEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcc
Confidence            4444444577888877621   111122222223567888874 5554 4556788999999865433222222334568


Q ss_pred             EEEEeCCCCEEEEec-CC-CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEE
Q psy10662         80 FVGLATDGDYVACGS-EN-NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYI  156 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~-~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~  156 (221)
                      .+++.|.+..++.+. .. +.|...++..... ..+            ....-.....++++|++..|..+ ...+.|..
T Consensus       124 ~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~------------~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~  190 (316)
T 1ijq_A          124 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSL------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISS  190 (316)
T ss_dssp             EEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEE------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             eEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEE------------EECCCCCceEEEEeccCCEEEEEECCCCeEEE
Confidence            999998666544333 33 6788777653221 111            01123457789999876665544 45678999


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +|+..... ..+. ..           .........+++. .+.++++-...+.|..++..+++
T Consensus       191 ~d~dg~~~-~~~~-~~-----------~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~  240 (316)
T 1ijq_A          191 IDVNGGNR-KTIL-ED-----------EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS  240 (316)
T ss_dssp             EETTSCSC-EEEE-EC-----------TTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred             EecCCCce-EEEe-ec-----------CCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence            99864322 2221 00           0011224567774 45666666678889888875543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=98.24  E-value=0.00012  Score=54.42  Aligned_cols=157  Identities=13%  Similarity=0.131  Sum_probs=96.2

Q ss_pred             CCcEEEecCCCcEEEEEcCCCccceeeecc----ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee----------e
Q psy10662         45 KEDIVSASTDSQLKLWNINKPNCLRSFVGH----INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH----------M  110 (221)
Q Consensus        45 ~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~----------~  110 (221)
                      +..++.+ .++.||.-++......+.+...    -..+..+..+|+|+++|..+.. .|.|-.+..+..          +
T Consensus        32 ~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~  109 (452)
T 3pbp_A           32 GTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAF  109 (452)
T ss_dssp             TTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTT
T ss_pred             CCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccccccc
Confidence            4444443 3578888888755455555432    2257889999999999888655 688888763221          1


Q ss_pred             EEEEeecccceeEeeEEEeeCceEEEEEecC---CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662        111 HAYRFDTVRSMLESSFVGHINDKNFVGLATD---GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN  187 (221)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (221)
                      +...+.....     ......+|..+.|+|-   +..|++-..|+.|++||+........ .++....    ........
T Consensus       110 q~~ty~l~~~-----~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~----~fg~d~~~  179 (452)
T 3pbp_A          110 QIFHYSIDEE-----EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN----SFGLDARV  179 (452)
T ss_dssp             EEEEEEGGGC-----C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS----EEESCSSC
T ss_pred             ceeEEEcCCc-----ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc----ccCCCccc
Confidence            1111111000     0113567999999994   55899999999999999986332222 2221111    11222334


Q ss_pred             cceeEEEEcCCCcEEEEec--CCCeEEE
Q psy10662        188 EFVSAVCWRQLSRVLVAAN--SQGIIKI  213 (221)
Q Consensus       188 ~~v~~~~~~~~~~~l~~~~--~dg~i~i  213 (221)
                      ..|.+++|.+++-.|+..+  .+|.|+-
T Consensus       180 ~ev~S~~Fg~~~lTLYvl~~t~~GDIYA  207 (452)
T 3pbp_A          180 NDITDLEFSKDGLTLYCLNTTEGGDIFA  207 (452)
T ss_dssp             CCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred             ceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence            6788999999988787755  7787753

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.24  E-value=0.00053  Score=49.52  Aligned_cols=182  Identities=9%  Similarity=-0.042  Sum_probs=100.3

Q ss_pred             eCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCC
Q psy10662         10 SADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG   87 (221)
Q Consensus        10 ~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~   87 (221)
                      ...+.|..+++.........+...-.....+++.+ ++. +++-...+.|.++++........+.........+++.|.+
T Consensus        54 ~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~  133 (318)
T 3sov_A           54 VSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSS  133 (318)
T ss_dssp             TTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGG
T ss_pred             CCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCC
Confidence            33455666665522111122222223456788874 444 4555667889999986543222222333456899999876


Q ss_pred             CEEEEec--CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCc
Q psy10662         88 DYVACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKH  164 (221)
Q Consensus        88 ~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~  164 (221)
                      ..++.+.  ..+.|...++..... ..+            ....-.....++++|++..|..+ ...+.|..+|+.....
T Consensus       134 g~ly~td~~~~~~I~r~~~dG~~~-~~~------------~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~  200 (318)
T 3sov_A          134 GFMYWTDWGEVPKIERAGMDGSSR-FII------------INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR  200 (318)
T ss_dssp             TEEEEEECSSSCEEEEEETTSCSC-EEE------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CEEEEEecCCCCEEEEEEcCCCCe-EEE------------EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce
Confidence            6554443  357788777653221 111            01122456789999966655544 4567899998764322


Q ss_pred             eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                       ..+. .             ........+++.. +.++.+-...+.|..++..+|+
T Consensus       201 -~~~~-~-------------~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~  240 (318)
T 3sov_A          201 -QAVV-K-------------GSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGE  240 (318)
T ss_dssp             -EEEE-C-------------SCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred             -EEEe-c-------------CCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence             1111 0             1112345666653 4555666667888888886554

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.23  E-value=0.00028  Score=53.31  Aligned_cols=155  Identities=11%  Similarity=0.085  Sum_probs=92.6

Q ss_pred             ceEEEEEecC---CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCC---Ce-EEEEECCCCe
Q psy10662         36 AVSYVKFLNK---EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSEN---NS-LYIYYKGLSK  108 (221)
Q Consensus        36 ~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~-v~iwd~~~~~  108 (221)
                      ....|+|.|+   +.|+.+...+.|+.+|..+++..... ........++++++++++++....   .. +...+...+.
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~  218 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF  218 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred             CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence            3568888873   66766655588999998776654333 334457899999999955554321   11 2222211110


Q ss_pred             eeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662        109 HMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN  187 (221)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (221)
                      .            .... .........++++| ++.+.++-..++.|+.+|..++.....+. ..            +..
T Consensus       219 ~------------~~~~-~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~-~~------------~~~  272 (433)
T 4hw6_A          219 T------------ERLS-LCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV-MM------------DTK  272 (433)
T ss_dssp             C------------CEEE-EEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-EC------------SCC
T ss_pred             e------------cccc-ccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-cc------------CCC
Confidence            0            0011 11234566788999 77766666677889999887665422211 00            011


Q ss_pred             cceeEEEEcCCCcEEE-EecCCCeEEEEECC
Q psy10662        188 EFVSAVCWRQLSRVLV-AANSQGIIKIYVIP  217 (221)
Q Consensus       188 ~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~  217 (221)
                      ..-..++|+|+|++|+ +-...+.|+.+++.
T Consensus       273 ~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d  303 (433)
T 4hw6_A          273 GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN  303 (433)
T ss_dssp             SSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred             CCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence            1224699999998554 44567899998865

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.17  E-value=0.00073  Score=48.42  Aligned_cols=178  Identities=11%  Similarity=0.014  Sum_probs=94.4

Q ss_pred             CCCceEEEEeCCC--eEEEEEecCCceeeEEEEe-ccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCcc-ceee----
Q psy10662          1 MNSCHLAFGSADH--CVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNC-LRSF----   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~-~~~~----   71 (221)
                      ++++++++....+  .|..++.. +++....... .......++..+++.++ +-..++.|.++|..+++. +...    
T Consensus        81 ~dG~l~vad~~~~~~~v~~~d~~-~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~  159 (306)
T 2p4o_A           81 SNGDLVATGWNADSIPVVSLVKS-DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML  159 (306)
T ss_dssp             TTSCEEEEEECTTSCEEEEEECT-TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred             CCCcEEEEeccCCcceEEEEcCC-CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc
Confidence            4566555443322  35555654 4443222221 11223445544555544 444588899998765421 1100    


Q ss_pred             -----eccccceeEEEEeCCCCEE-EEecCCCeEEEEECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662         72 -----VGHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY  144 (221)
Q Consensus        72 -----~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  144 (221)
                           ...-...+.+  +|+++.+ ++-...+.|..+|+.. ++. .       ...   .+ ........++++++|++
T Consensus       160 ~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~-~-------~~~---~~-~~~~~P~gi~vd~dG~l  225 (306)
T 2p4o_A          160 ARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKP-G-------EPE---IF-VEQTNIDDFAFDVEGNL  225 (306)
T ss_dssp             SCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCB-C-------CCE---EE-EESCCCSSEEEBTTCCE
T ss_pred             ccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCC-C-------ccE---EE-eccCCCCCeEECCCCCE
Confidence                 0111123445  7787754 5556678899999864 221 0       000   01 11134567899999998


Q ss_pred             EEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc---CCCcEEEEecC
Q psy10662        145 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR---QLSRVLVAANS  207 (221)
Q Consensus       145 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~  207 (221)
                      +++....+.|.++|.. ++......             .........+++|.   |+++.|+.++.
T Consensus       226 ~va~~~~~~V~~~~~~-G~~~~~~~-------------~~~~~~~p~~~a~~g~~~d~~~LyVt~~  277 (306)
T 2p4o_A          226 YGATHIYNSVVRIAPD-RSTTIIAQ-------------AEQGVIGSTAVAFGQTEGDCTAIYVVTN  277 (306)
T ss_dssp             EEECBTTCCEEEECTT-CCEEEEEC-------------GGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred             EEEeCCCCeEEEECCC-CCEEEEee-------------cccccCCceEEEEecccCCCCEEEEECC
Confidence            7777778889999864 33211100             00112357889998   88777766543

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.16  E-value=0.00064  Score=47.34  Aligned_cols=175  Identities=13%  Similarity=0.131  Sum_probs=104.0

Q ss_pred             EeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeec-cccceeEEEEeCCCCEEEEecCCCeEEEEECCCC
Q psy10662         31 KGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVG-HINDKNFVGLATDGDYVACGSENNSLYIYYKGLS  107 (221)
Q Consensus        31 ~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~  107 (221)
                      .+-...+..++|+| ++.|+ +...++.|...|.. ++.++.+.- -......+++.+++.++++.-.++.+.++++...
T Consensus        23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~  101 (255)
T 3qqz_A           23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPN  101 (255)
T ss_dssp             TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred             CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence            34446799999997 45555 46678899999987 777766631 1245678888888887777667788999987655


Q ss_pred             eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC---CCceeeeeeeccccccccccccc
Q psy10662        108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL---SKHMHAYRFDTVRSMLERDRNED  184 (221)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~  184 (221)
                      ..+.........   . .....+...-.++|+|.++.|.++.+.....+|..+.   ...+.... +.   ...  ..  
T Consensus       102 ~~i~~~~~~~~~---~-~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~-~~---~~~--~~--  169 (255)
T 3qqz_A          102 SEVKILKKIKIP---L-QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISK-DK---ALQ--RQ--  169 (255)
T ss_dssp             CCEEEEEEEECC---C-SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEE-CH---HHH--HT--
T ss_pred             Ceeeeeeeeccc---c-ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeec-ch---hhc--cc--
Confidence            432211100000   0 0012344567899999998777777766656665541   11111110 00   000  00  


Q ss_pred             ccccceeEEEEcCC-CcEEEEecCCCeEEEEECCc
Q psy10662        185 DTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       185 ~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~  218 (221)
                      .+...+.+++++|. +.+++.......+..+|...
T Consensus       170 ~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g  204 (255)
T 3qqz_A          170 FTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG  204 (255)
T ss_dssp             CCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred             cccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC
Confidence            11224678999995 45555566677777777654

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=98.11  E-value=0.0013  Score=49.11  Aligned_cols=198  Identities=11%  Similarity=0.182  Sum_probs=117.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-Cccceeeeccc----
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-PNCLRSFVGHI----   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~~----   75 (221)
                      |..+.||.-. ...+.|||++ ++..++.+.- ...|.-=.|-+...|+..+ +..|+-|++.. ..+.+.+..|.    
T Consensus        75 P~~~iiALra-g~~lQiFnle-~K~klks~~~-~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~  150 (494)
T 1bpo_A           75 PASKVIALKA-GKTLQIFNIE-MKSKMKAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG  150 (494)
T ss_dssp             SSSSCEEEEE-TTEEEEEETT-TTEEEEEEEC-SSCCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTT
T ss_pred             CCCcEEEEec-CCeEEEEchH-Hhhhhcceec-CCCceEEEecCCCeEEEEc-CCeeEEecccCCCCchhheecchhccc
Confidence            4556666654 6799999998 7777777763 4567676777666655543 56799999964 35556665553    


Q ss_pred             cceeEEEEeCCCCEEEEec---C----CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC---CEE
Q psy10662         76 NDKNFVGLATDGDYVACGS---E----NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG---DYV  145 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~---~----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l  145 (221)
                      ..|..-..+++.+.++..+   .    .|.+.+|..+.+..              +.+.+|...-..+.+..+.   +++
T Consensus       151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s--------------Q~ieGhaa~F~~~~~~g~~~~~~lf  216 (494)
T 1bpo_A          151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--------------QPIEGHAASFAQFKMEGNAEESTLF  216 (494)
T ss_dssp             CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE--------------EEECCSEEEEEEEECTTCSSEEEEE
T ss_pred             ceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc--------------chheeeeeeeEEEecCCCCCCceEE
Confidence            3566667788888765332   2    35667776654432              2245554443333332111   122


Q ss_pred             EEecC---CCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        146 ACGSE---NNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       146 ~~~~~---d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +-+..   .+.+.+-++... .....+.    .+........+.......++..++....++.-+.-|.|++||+.++.
T Consensus       217 ~fa~r~~~g~kLhi~Ei~~~~~~~~~f~----kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt  291 (494)
T 1bpo_A          217 CFAVRGQAGGKLHIIEVGTPPTGNQPFP----KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT  291 (494)
T ss_dssp             EEEECSTTCCEEEEEECSCCCTTCCCCC----CEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred             EEEEecCCCcEEEEEEcCCCccCCCCcc----ceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence            22222   368888887543 1111111    00111111112233445678999988899999999999999999985

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.10  E-value=0.0014  Score=53.26  Aligned_cols=187  Identities=13%  Similarity=0.129  Sum_probs=109.8

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEe----------ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee---e
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKG----------HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF---V   72 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~---~   72 (221)
                      |-.|..++-|..++.. ... ...+..          ....|.++...+++.|..|+.++-|..||..+++.....   .
T Consensus       326 lWigt~~~Gl~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~  403 (781)
T 3v9f_A          326 IWIGTWGGGINFISNA-PPT-FHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRE  403 (781)
T ss_dssp             EEEEEBSSCEEEECSS-CCS-CEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----
T ss_pred             EEEEecCCeEEEeCCC-CCc-ceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCC
Confidence            4455556667777765 222 222210          234688888887788888887777999998654332211   1


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      .....|.++...+++.+.+ |+.++-+..+|..+++... +  ...        ......|.++...+++++.+ |+. +
T Consensus       404 ~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~-~--~~~--------~~~~~~v~~i~~d~~g~lwi-gt~-~  469 (781)
T 3v9f_A          404 LLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQI-I--ELE--------KNELLDVRVFYEDKNKKIWI-GTH-A  469 (781)
T ss_dssp             CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEE-C--CST--------TTCCCCEEEEEECTTSEEEE-EET-T
T ss_pred             CCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEE-e--ccC--------CCCCCeEEEEEECCCCCEEE-EEC-C
Confidence            1235688888887776544 5555668888877654321 1  000        01235688888888876544 444 5


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      -+..||..+++.......   .       ........|.++...++|++.+....+| +..|+..++
T Consensus       470 Gl~~~~~~~~~~~~~~~~---~-------~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~  525 (781)
T 3v9f_A          470 GVFVIDLASKKVIHHYDT---S-------NSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQ  525 (781)
T ss_dssp             EEEEEESSSSSCCEEECT---T-------TSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCC
T ss_pred             ceEEEeCCCCeEEecccC---c-------ccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCC
Confidence            588898776543221110   0       0001135688999999888666554355 666776544

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.09  E-value=0.00051  Score=49.46  Aligned_cols=150  Identities=9%  Similarity=0.046  Sum_probs=95.3

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEE-EEe----c--cCceEEEEE---ecCCcEEEecC--------------CCcEE
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAV-FKG----H--RKAVSYVKF---LNKEDIVSAST--------------DSQLK   58 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~-~~~----~--~~~i~~~~~---~~~~~l~s~~~--------------d~~v~   58 (221)
                      +.++++.-..+.|..|+.. .+..... +..    .  ...+..|.|   .|++.|+.+..              +..|.
T Consensus        25 g~~~vs~l~~g~V~~~~~~-~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~  103 (334)
T 2p9w_A           25 QVFYQSNLYKGRIEVYNPK-TQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFH  103 (334)
T ss_dssp             TEEEEEETTTTEEEEECTT-TCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEE
T ss_pred             CEEEEEeccCCEEEEEcCC-CCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEE
Confidence            4444554478999999986 3322222 221    0  113689999   46666555332              57799


Q ss_pred             EEEcC---CCccceeee--cc-----------ccceeEEEEeCCCCEEEEecCC-CeEEEEECCCCeeeEEEEeecccce
Q psy10662         59 LWNIN---KPNCLRSFV--GH-----------INDKNFVGLATDGDYVACGSEN-NSLYIYYKGLSKHMHAYRFDTVRSM  121 (221)
Q Consensus        59 ~wd~~---~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~  121 (221)
                      .||+.   +++.+....  ..           ......++..++|+..++++.. +.|...+.... .+..+..+..   
T Consensus       104 ~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~---  179 (334)
T 2p9w_A          104 SFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESG---  179 (334)
T ss_dssp             EEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCC---
T ss_pred             EEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCC---
Confidence            99998   777665442  11           1247899999999988888877 87777666533 2222211100   


Q ss_pred             eEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662        122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus       122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                          ........+.|+++|+|+.|++....|.+..+|+..
T Consensus       180 ----~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          180 ----NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             ----CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             ----CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence                011122366899999999888877799999999873

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=98.06  E-value=0.00036  Score=51.90  Aligned_cols=150  Identities=10%  Similarity=0.147  Sum_probs=92.8

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEec----cCceEEEEEecCCcEEEecCCCcEEEEEcCCCc----------cc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH----RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN----------CL   68 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~----------~~   68 (221)
                      |..++.+ .++.||.-++.. ....+.++..    -+.|..+..+|++.+++-..+..|.|-.+..+.          .+
T Consensus        32 ~t~i~~a-~~n~iR~~~i~~-~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~  109 (452)
T 3pbp_A           32 GTRIVFI-QDNIIRWYNVLT-DSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAF  109 (452)
T ss_dssp             TTEEEEE-ETTEEEEEETTT-CSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred             CCEEEEE-ECCEEEEEECCC-CCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccccc
Confidence            3334443 346677667652 2234455533    225788999998887777788899999886321          01


Q ss_pred             --eeeec------cccceeEEEEeCCC---CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662         69 --RSFVG------HINDKNFVGLATDG---DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG  137 (221)
Q Consensus        69 --~~~~~------~~~~v~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  137 (221)
                        +.+.-      ...+|..+.|||-+   ..|++-..|+.|++||+........ .++....  ..........+.+++
T Consensus       110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~--~fg~d~~~~ev~S~~  186 (452)
T 3pbp_A          110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN--SFGLDARVNDITDLE  186 (452)
T ss_dssp             EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS--EEESCSSCCCEEEEE
T ss_pred             ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc--ccCCCcccceEEEEE
Confidence              12221      24679999999964   4789999999999999986322111 1121111  011122336788999


Q ss_pred             EecCCCEEEE--ecCCCeEEEE
Q psy10662        138 LATDGDYVAC--GSENNSLYIY  157 (221)
Q Consensus       138 ~~~~~~~l~~--~~~d~~i~~~  157 (221)
                      |.+++-.|.+  .++.|-|+-.
T Consensus       187 Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          187 FSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             ECTTSSCEEEEECTTSCEEEEE
T ss_pred             EcCCCcEEEEEecCCCCCEEEE
Confidence            9998876666  4478888755

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.06  E-value=0.0031  Score=51.33  Aligned_cols=178  Identities=8%  Similarity=-0.076  Sum_probs=104.0

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCC----ccceeeeccccceeEEEEe
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKP----NCLRSFVGHINDKNFVGLA   84 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~----~~~~~~~~~~~~v~~~~~~   84 (221)
                      ....|+..++. .... ..+......+..|+|.+ ++. +++-...+.|+.+++...    .....+.........|++.
T Consensus       402 n~~~Ir~i~l~-~~~~-~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD  479 (791)
T 3m0c_C          402 NRHEVRKMTLD-RSEY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD  479 (791)
T ss_dssp             CBSSEEEECTT-SCCC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred             cccceeEeecc-CCcc-eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence            34567777776 3332 22333456678999986 455 445566788988888653    2222222233456789998


Q ss_pred             CCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCC
Q psy10662         85 TDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGL  161 (221)
Q Consensus        85 ~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~  161 (221)
                      +.+. ++++-...+.|.+.++...... .+            +.........|+++|.+..|+....  .+.|...++..
T Consensus       480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~-~l------------~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG  546 (791)
T 3m0c_C          480 WIHSNIYWTDSVLGTVSVADTKGVKRK-TL------------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG  546 (791)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSSSEE-EE------------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred             ecCCcEEEEecCCCeEEEEeCCCCeEE-EE------------EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence            7764 5566667788999988744322 21            1122345788999997655555442  36788877754


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      ......+.               ..-...+.|++++.+..|+.+ ...+.|...++..
T Consensus       547 ~~~~~lv~---------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG  589 (791)
T 3m0c_C          547 VDIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  589 (791)
T ss_dssp             CCEEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CceEEEEe---------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence            33221111               112356788998766555554 4567788888754

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.96  E-value=0.0019  Score=46.95  Aligned_cols=147  Identities=12%  Similarity=0.193  Sum_probs=93.4

Q ss_pred             CCeEEEEEecCCceeeEEEEe------cc-CceEEEEE--ec-CC--cEEEecCCCcEEEEEcC-------CCccceeee
Q psy10662         12 DHCVHYYDLRNTKEALAVFKG------HR-KAVSYVKF--LN-KE--DIVSASTDSQLKLWNIN-------KPNCLRSFV   72 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~------~~-~~i~~~~~--~~-~~--~l~s~~~d~~v~~wd~~-------~~~~~~~~~   72 (221)
                      +++|.+|++......+..+..      .. ..+..+++  +| .+  +++....+|.+..|++.       +.+.++.+.
T Consensus        98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~  177 (355)
T 3amr_A           98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK  177 (355)
T ss_dssp             CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred             CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence            579999988533333444421      11 45667777  55 34  47788889999999983       335566664


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECC-----CCeeeEEEEeecccceeEeeEEEeeCceEEEEE--ecCCC-E
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKG-----LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL--ATDGD-Y  144 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~  144 (221)
                       ..+.+..+...+....|+.+-++.-|..+|.+     +.+.+..+           ........+..+++  .++++ +
T Consensus       178 -lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~-----------~~g~l~aDvEGLai~~~~~g~gy  245 (355)
T 3amr_A          178 -MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA-----------DGRHLTRDIEGLTIYYAADGKGY  245 (355)
T ss_dssp             -CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEB-----------SSSSBCSCEEEEEEEECGGGCEE
T ss_pred             -CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEe-----------cCCccccCcceEEEEecCCCCEE
Confidence             34578899999988899999988777777754     22222211           00111235677777  45555 5


Q ss_pred             EEEec-CCCeEEEEEcC-CCCceeeeee
Q psy10662        145 VACGS-ENNSLYIYYKG-LSKHMHAYRF  170 (221)
Q Consensus       145 l~~~~-~d~~i~~~d~~-~~~~~~~~~~  170 (221)
                      |++++ .+....+||.+ +.+.+..+..
T Consensus       246 LivSsQG~~s~~Vydr~~~~~~vg~f~I  273 (355)
T 3amr_A          246 LMASSQGNSSYAIYDRQGKNKYVADFRI  273 (355)
T ss_dssp             EEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred             EEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence            65555 56799999996 5666666643

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.94  E-value=0.0001  Score=59.04  Aligned_cols=157  Identities=6%  Similarity=-0.144  Sum_probs=85.3

Q ss_pred             eEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec-CC-CeEEEEECCCCeeeEE
Q psy10662         37 VSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS-EN-NSLYIYYKGLSKHMHA  112 (221)
Q Consensus        37 i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~v~iwd~~~~~~~~~  112 (221)
                      ...|++.+ ++. +++-...+.|.++++........+.........+++.|.+.+|+.+. .. +.|..+++...... .
T Consensus       455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-~  533 (699)
T 1n7d_A          455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-S  533 (699)
T ss_dssp             CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-E
T ss_pred             cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-E
Confidence            45677763 444 45556678899999865433322222223457889998665444433 22 66777665432111 1


Q ss_pred             EEeecccceeEeeEEEeeCceEEEEEecCCCE-EEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccccee
Q psy10662        113 YRFDTVRSMLESSFVGHINDKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVS  191 (221)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  191 (221)
                      +            ..........|+|+|++.. +++-...+.|..+++........+.             .........
T Consensus       534 l------------~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~-------------~~~~~~~P~  588 (699)
T 1n7d_A          534 L------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-------------DEKRLAHPF  588 (699)
T ss_dssp             E------------SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC-------------CSSSCSSCC
T ss_pred             E------------EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe-------------cCCcCCCce
Confidence            0            0111234667999987554 4555566789999876432211110             000111223


Q ss_pred             EEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        192 AVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+++..+ .++++....+.|..++..+++
T Consensus       589 glavd~~-~lywtd~~~~~V~~~d~~~G~  616 (699)
T 1n7d_A          589 SLAVFED-KVFWTDIINEAIFSANRLTGS  616 (699)
T ss_dssp             CCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred             EeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence            4555544 555565667889888876543

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.93  E-value=0.00016  Score=57.62  Aligned_cols=182  Identities=10%  Similarity=0.060  Sum_probs=91.0

Q ss_pred             CCCceEEEEe-CC-----CeEEEEEecCCceeeEEEEecc-CceE----EEEEe-cCCcEEEecCC---------CcEEE
Q psy10662          1 MNSCHLAFGS-AD-----HCVHYYDLRNTKEALAVFKGHR-KAVS----YVKFL-NKEDIVSASTD---------SQLKL   59 (221)
Q Consensus         1 ~~~~~l~~~~-~d-----g~i~i~~~~~~~~~~~~~~~~~-~~i~----~~~~~-~~~~l~s~~~d---------~~v~~   59 (221)
                      +++++++.|+ .+     ..+.+||.. +.+ -..+.... .+..    ...+. .+..++.++.+         ..+..
T Consensus       296 ~dg~iyv~GG~~~~~~~~~~~e~yd~~-t~~-W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~  373 (656)
T 1k3i_A          296 SDGRVFTIGGSWSGGVFEKNGEVYSPS-SKT-WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNW  373 (656)
T ss_dssp             TTSCEEEECCCCCSSSCCCCEEEEETT-TTE-EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEE
T ss_pred             cCCeEEEEeCcccCCcccccceEeCCC-CCc-ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceee
Confidence            4788889988 34     468999987 332 11111000 0000    00111 12233444333         45678


Q ss_pred             EEcCCCccceeeeccc---------cceeEEEEeC-CCCEEEEecCCC-----------eEEEEECCCCeeeEEEEeecc
Q psy10662         60 WNINKPNCLRSFVGHI---------NDKNFVGLAT-DGDYVACGSENN-----------SLYIYYKGLSKHMHAYRFDTV  118 (221)
Q Consensus        60 wd~~~~~~~~~~~~~~---------~~v~~~~~~~-~~~~l~~~~~d~-----------~v~iwd~~~~~~~~~~~~~~~  118 (221)
                      ||..+.........+.         ..-.++.|.. ++++++.|+.++           .+.+||..+.+.....     
T Consensus       374 yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-----  448 (656)
T 1k3i_A          374 YYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA-----  448 (656)
T ss_dssp             EECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC-----
T ss_pred             eecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc-----
Confidence            8887665433222111         1223444433 667778887532           5677777665432210     


Q ss_pred             cceeEeeEEEeeCceEEEEEecCCCEEEEecCC-----------CeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662        119 RSMLESSFVGHINDKNFVGLATDGDYVACGSEN-----------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN  187 (221)
Q Consensus       119 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (221)
                      ..    .+. ....-.++...|++++++.|+.+           ..+.+||..+.+-..             ........
T Consensus       449 ~~----~mp-~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~-------------~~~~~~~R  510 (656)
T 1k3i_A          449 SN----GLY-FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK-------------QNPNSIVR  510 (656)
T ss_dssp             TT----CCS-SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE-------------CCCCSSCC
T ss_pred             cC----CCC-CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee-------------cCCCCCcc
Confidence            00    000 01112244567899999999864           457788876543211             11111111


Q ss_pred             cceeEEEEcCCCcEEEEecC
Q psy10662        188 EFVSAVCWRQLSRVLVAANS  207 (221)
Q Consensus       188 ~~v~~~~~~~~~~~l~~~~~  207 (221)
                      .......+.|+|++++.|+.
T Consensus       511 ~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          511 VYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CTTEEEEECTTSCEEEEECC
T ss_pred             ccccHhhcCCCcEEEecCCC
Confidence            12234556799999999885

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.92  E-value=6.9e-05  Score=60.05  Aligned_cols=178  Identities=7%  Similarity=-0.058  Sum_probs=97.1

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEe-cCCCcEEEEEcCC----CccceeeeccccceeEEEEe
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSA-STDSQLKLWNINK----PNCLRSFVGHINDKNFVGLA   84 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~-~~d~~v~~wd~~~----~~~~~~~~~~~~~v~~~~~~   84 (221)
                      ..+.|+..++. .......+. ....+..|+|.+ ++.|+.+ ...+.|+.+++..    ......+.........+++.
T Consensus       384 ~~~~I~~id~~-~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD  461 (699)
T 1n7d_A          384 NRHEVRKMTLD-RSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD  461 (699)
T ss_dssp             CTTC-CEECTT-SCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred             CccceEEEeCC-CCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence            34567777776 333322222 234567889986 4555544 4568899999875    22222222112234678887


Q ss_pred             CC-CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCC
Q psy10662         85 TD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGL  161 (221)
Q Consensus        85 ~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~  161 (221)
                      +. ++++++-...+.|.++++........+             .........++++|.+.+|+....  .+.|..+++..
T Consensus       462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~-------------~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG  528 (699)
T 1n7d_A          462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLF-------------REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG  528 (699)
T ss_dssp             CSSSBCEECCTTTSCEEEEBSSSCCEEEEC-------------CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred             eeCCcEEEEeccCCeEEEEecCCCceEEEE-------------eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence            54 455566566788999887654322111             111234567888986555554432  25677666543


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EEecCCCeEEEEECCc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VAANSQGIIKIYVIPI  218 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~  218 (221)
                      .... .+.              ...-...+.|+|+|++..| ++-+..+.|..+++..
T Consensus       529 ~~~~-~l~--------------~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG  571 (699)
T 1n7d_A          529 VDIY-SLV--------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  571 (699)
T ss_dssp             CCCC-EES--------------CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred             CCee-EEE--------------eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence            2111 000              0112245689999875555 4445677899888864

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.90  E-value=0.0042  Score=47.52  Aligned_cols=154  Identities=7%  Similarity=-0.012  Sum_probs=82.0

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEec---cCceEEEEE-------ecCCc-EEEecCCC-------cEEEEEcCC-
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGH---RKAVSYVKF-------LNKED-IVSASTDS-------QLKLWNINK-   64 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~---~~~i~~~~~-------~~~~~-l~s~~~d~-------~v~~wd~~~-   64 (221)
                      +++++-...+.|++.|+. .+.........   ......|+|       ++++. |+.+...+       .|.+++... 
T Consensus       153 ~Lyv~~~~~~~i~~ID~~-~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~  231 (496)
T 3kya_A          153 HLYICYDGHKAIQLIDLK-NRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD  231 (496)
T ss_dssp             EEEEEEETEEEEEEEETT-TTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred             EEEEEECCCCeEEEEECC-CCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence            344444444678888876 44433333221   125899999       87543 66665543       256665433 


Q ss_pred             Cccc-----eeeeccccceeEEEEeCC-CCEEEEecCCCeEEEEECC-------CCeeeEEEE-eecccceeEeeEEEee
Q psy10662         65 PNCL-----RSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKG-------LSKHMHAYR-FDTVRSMLESSFVGHI  130 (221)
Q Consensus        65 ~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~  130 (221)
                      +...     ..+... .....++++|+ +.++++-..++.|..+|+.       +++.-.... +.......+.. .+..
T Consensus       232 G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~-~~~~  309 (496)
T 3kya_A          232 GTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFT-IADP  309 (496)
T ss_dssp             SCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEE-CSSS
T ss_pred             CceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEe-cCCC
Confidence            2222     222222 23467888994 5556677788889999986       443200000 00000000000 1122


Q ss_pred             CceEEEEEecCCCEE-EEecCCCeEEEEEcC
Q psy10662        131 NDKNFVGLATDGDYV-ACGSENNSLYIYYKG  160 (221)
Q Consensus       131 ~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~  160 (221)
                      .....++|+|+|+.| ++-.....|+.++..
T Consensus       310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d  340 (496)
T 3kya_A          310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYD  340 (496)
T ss_dssp             SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             CCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence            346789999999954 444567788887654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.88  E-value=0.004  Score=47.65  Aligned_cols=169  Identities=8%  Similarity=0.038  Sum_probs=91.0

Q ss_pred             eEEEEEec--CCcEEEecC-CCcEEEEEcCCCccceeeecc---ccceeEEEE-------eCCCCEEEEecCCC------
Q psy10662         37 VSYVKFLN--KEDIVSAST-DSQLKLWNINKPNCLRSFVGH---INDKNFVGL-------ATDGDYVACGSENN------   97 (221)
Q Consensus        37 i~~~~~~~--~~~l~s~~~-d~~v~~wd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~d~------   97 (221)
                      ...|+|.|  ++.|+.+.. .+.|++.|+.++.........   ......++|       ++++++++.+...+      
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~  220 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES  220 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence            46788886  355555544 467888998776554433221   235789999       99998655554433      


Q ss_pred             -eEEEEECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcC-------CCCceee
Q psy10662         98 -SLYIYYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKG-------LSKHMHA  167 (221)
Q Consensus        98 -~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~-------~~~~~~~  167 (221)
                       .|.+++... ++...     ......   +.. -.....++++| ++.++++-..++.|+.+|+.       ++..-..
T Consensus       221 ~~V~~i~r~~~G~~~~-----~~~~~~---v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp  291 (496)
T 3kya_A          221 PSVYIIKRNADGTFDD-----RSDIQL---IAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP  291 (496)
T ss_dssp             EEEEEEECCTTSCCST-----TSCEEE---EEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred             ceEEEEecCCCCceee-----ccccee---ecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence             255555332 11100     000011   111 22445788899 55556666678889999987       4432000


Q ss_pred             eeeecccccccccccccccccceeEEEEcCCCcEEEE-ecCCCeEEEEEC
Q psy10662        168 YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA-ANSQGIIKIYVI  216 (221)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iw~~  216 (221)
                      +...... ....+... +.......++|+|+|++|+. -+..+.|+.++.
T Consensus       292 ~~~~~~g-~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~  339 (496)
T 3kya_A          292 IVKNNPN-TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY  339 (496)
T ss_dssp             BGGGCTT-TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             ccccccc-ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence            0000000 00000001 11234578999999996544 456788888664

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.85  E-value=0.0044  Score=46.29  Aligned_cols=158  Identities=6%  Similarity=-0.139  Sum_probs=92.4

Q ss_pred             CceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec--CCCeEEEEECCCCeee
Q psy10662         35 KAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKHM  110 (221)
Q Consensus        35 ~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~  110 (221)
                      .....+++.+ ++. +++-...+.|.+.++........+.........+++.|.+.+|+...  ..+.|...++......
T Consensus       159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~  238 (400)
T 3p5b_L          159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  238 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred             CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence            4567888875 444 44556678899999865543333332334578999999666554433  2467887777543221


Q ss_pred             EEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662        111 HAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF  189 (221)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (221)
                      ..             ....-.....++++|++..|..+. ..+.|..+|+.......... .            ......
T Consensus       239 ~~-------------~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~------------~~~l~~  292 (400)
T 3p5b_L          239 SL-------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-D------------EKRLAH  292 (400)
T ss_dssp             EE-------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEE-C------------SSTTSS
T ss_pred             EE-------------EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEe-C------------CCCCCC
Confidence            11             111224678899998776665554 56789999876433222111 0            001112


Q ss_pred             eeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        190 VSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ..++++. .+.++++-...+.|..++..+|
T Consensus       293 P~gl~v~-~~~lywtd~~~~~V~~~~~~~G  321 (400)
T 3p5b_L          293 PFSLAVF-EDKVFWTDIINEAIFSANRLTG  321 (400)
T ss_dssp             EEEEEEE-TTEEEEEESSSCSEEEEESSSC
T ss_pred             CEEEEEe-CCEEEEecCCCCeEEEEEcCCC
Confidence            3456663 3455666666788888886555

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.85  E-value=0.0033  Score=44.76  Aligned_cols=187  Identities=15%  Similarity=0.110  Sum_probs=90.2

Q ss_pred             CCceEEEEeCC-----CeEEEEEecCCc----eeeEEEEeccCceEEEEEecCCcEEEecCC-----CcEEEEEcCCCcc
Q psy10662          2 NSCHLAFGSAD-----HCVHYYDLRNTK----EALAVFKGHRKAVSYVKFLNKEDIVSASTD-----SQLKLWNINKPNC   67 (221)
Q Consensus         2 ~~~~l~~~~~d-----g~i~i~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d-----~~v~~wd~~~~~~   67 (221)
                      ++.+++.|+.+     ..+.+||+.+..    +.+..+...... .+++...+..++.|+.+     ..+.+||+.+.+-
T Consensus        62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W  140 (301)
T 2vpj_A           62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL-AGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQW  140 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS-CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred             CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc-eeEEEECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence            35566777654     358888876322    111111111111 22222344455666543     3578889876543


Q ss_pred             cee--eeccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         68 LRS--FVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        68 ~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                      ...  +...... .++.. .++++++.|+.+     ..+.+||+.+.+....-           .+.........+  .-
T Consensus       141 ~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-----------~~p~~r~~~~~~--~~  205 (301)
T 2vpj_A          141 SMLGDMQTAREG-AGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT-----------PMATKRSGAGVA--LL  205 (301)
T ss_dssp             EEEEECSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC-----------CCSSCCBSCEEE--EE
T ss_pred             EECCCCCCCccc-ceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCC-----------CCCcccccceEE--EE
Confidence            321  1111111 12222 256677777654     45888888776543221           011001111112  22


Q ss_pred             CCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----Ce
Q psy10662        141 DGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----GI  210 (221)
Q Consensus       141 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~  210 (221)
                      ++++++.|+.+     ..+.+||+.+.+-...      ...       .........+.+  ++++++.|+.+     ..
T Consensus       206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~------~~~-------p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~  270 (301)
T 2vpj_A          206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV------TSM-------TTPRCYVGATVL--RGRLYAIAGYDGNSLLSS  270 (301)
T ss_dssp             TTEEEEECCBCSSSBCCCEEEEETTTTEEEEE------CCC-------SSCCBSCEEEEE--TTEEEEECCBCSSSBEEE
T ss_pred             CCEEEEEeCCCCCcccceEEEEeCCCCcEEEC------CCC-------CCcccceeEEEE--CCEEEEEcCcCCCccccc
Confidence            56777778764     4578888776543211      110       001111122222  67777777754     46


Q ss_pred             EEEEECCcc
Q psy10662        211 IKIYVIPIR  219 (221)
Q Consensus       211 i~iw~~~~~  219 (221)
                      +.+||+.+.
T Consensus       271 v~~yd~~~~  279 (301)
T 2vpj_A          271 IECYDPIID  279 (301)
T ss_dssp             EEEEETTTT
T ss_pred             EEEEcCCCC
Confidence            788888764

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.83  E-value=0.0069  Score=48.02  Aligned_cols=179  Identities=7%  Similarity=-0.058  Sum_probs=106.9

Q ss_pred             CCCeEEEEEecCCceeeEEEE-eccCceEEEEEec-CCcE-EEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCC
Q psy10662         11 ADHCVHYYDLRNTKEALAVFK-GHRKAVSYVKFLN-KEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG   87 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~   87 (221)
                      ..+.|+..+++. ......+. ..-..+..|+|++ ++.+ ++-..++.|..+++........+.........+++.+.+
T Consensus        13 ~~~~I~~i~l~~-~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~   91 (628)
T 4a0p_A           13 RRADIRRISLET-NNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLG   91 (628)
T ss_dssp             ETTEEEEEESSC-TTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT
T ss_pred             eCCcEEEEECCC-CCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCC
Confidence            567899999973 32222222 1234678999996 4554 455668899999986543333232222356788888655


Q ss_pred             C-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec--CCCeEEEEEcCCCCc
Q psy10662         88 D-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKH  164 (221)
Q Consensus        88 ~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~  164 (221)
                      . ++++-...+.|.+.++..... ..+            ....-.....++++|....|....  ..+.|...++.....
T Consensus        92 ~~LY~tD~~~~~I~v~~~dG~~~-~~l------------~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~  158 (628)
T 4a0p_A           92 KNLYWADTGTNRIEVSKLDGQHR-QVL------------VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER  158 (628)
T ss_dssp             TEEEEEETTTTEEEEEETTSTTC-EEE------------ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             CEEEEEECCCCEEEEEecCCCcE-EEE------------EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence            4 556666678899998864322 111            112234567899998555555444  346677776654332


Q ss_pred             eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCcc
Q psy10662        165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPIR  219 (221)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~  219 (221)
                      ....                ..-...+.++++++++.|+.+ ...+.|...++...
T Consensus       159 ~~l~----------------~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~  198 (628)
T 4a0p_A          159 TTLV----------------PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL  198 (628)
T ss_dssp             EEEE----------------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             EEEE----------------CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence            1111                112346789999976655554 45778888887653

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.79  E-value=0.0043  Score=44.32  Aligned_cols=186  Identities=13%  Similarity=0.091  Sum_probs=89.6

Q ss_pred             CCceEEEEeCC----CeEEEEEecCCceeeEEEEeccC--ceEEEEEecCCcEEEecCC------CcEEEEEcCCCccce
Q psy10662          2 NSCHLAFGSAD----HCVHYYDLRNTKEALAVFKGHRK--AVSYVKFLNKEDIVSASTD------SQLKLWNINKPNCLR   69 (221)
Q Consensus         2 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~l~s~~~d------~~v~~wd~~~~~~~~   69 (221)
                      ++.+++.|+.+    ..+.+||+. +.+- ..+..-..  .-.+++...+..++.|+.+      ..+.+||..+.+-..
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~-~~~W-~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~  132 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVV-KDSW-YSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT  132 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETT-TTEE-EEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCC-CCeE-EECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence            35566777654    567888876 3321 11111111  1112222344556666654      458889987764322


Q ss_pred             e--eeccccceeEEEEeCCCCEEEEecC---------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEE
Q psy10662         70 S--FVGHINDKNFVGLATDGDYVACGSE---------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL  138 (221)
Q Consensus        70 ~--~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  138 (221)
                      .  +...... .++.. -++++++.|+.         -..+.+||+.+.+....-           .+......- ++..
T Consensus       133 ~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-----------~~p~~r~~~-~~~~  198 (306)
T 3ii7_A          133 KPSMLTQRCS-HGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-----------PMIEARKNH-GLVF  198 (306)
T ss_dssp             ECCCSSCCBS-CEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-----------CCSSCCBSC-EEEE
T ss_pred             CCCCcCCcce-eEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-----------Cccchhhcc-eEEE
Confidence            1  1111111 12222 25666666653         345788888877543221           001001111 1111


Q ss_pred             ecCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----
Q psy10662        139 ATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----  208 (221)
Q Consensus       139 ~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----  208 (221)
                       -++++++.|+.+     ..+.+||..+.+-..      ..       ...........+.+  ++++++.|+.+     
T Consensus       199 -~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~------~~-------~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~  262 (306)
T 3ii7_A          199 -VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM------VS-------PMPWKGVTVKCAAV--GSIVYVLAGFQGVGRL  262 (306)
T ss_dssp             -ETTEEEEECCEETTEEBCCEEEEETTTTEEEE------CC-------CCSCCBSCCEEEEE--TTEEEEEECBCSSSBC
T ss_pred             -ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEE------CC-------CCCCCccceeEEEE--CCEEEEEeCcCCCeee
Confidence             256777777754     356777776553211      11       11111111222333  67777877743     


Q ss_pred             CeEEEEECCcc
Q psy10662        209 GIIKIYVIPIR  219 (221)
Q Consensus       209 g~i~iw~~~~~  219 (221)
                      ..+.+||+.+.
T Consensus       263 ~~~~~yd~~~~  273 (306)
T 3ii7_A          263 GHILEYNTETD  273 (306)
T ss_dssp             CEEEEEETTTT
T ss_pred             eeEEEEcCCCC
Confidence            56888888765

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.75  E-value=0.0059  Score=44.72  Aligned_cols=155  Identities=9%  Similarity=0.097  Sum_probs=85.4

Q ss_pred             ceEEEEEecCCcEEEec-------------CCCcEEEEEcCCCc-ccee--eec-----cccceeEEEEeC--CCC-EE-
Q psy10662         36 AVSYVKFLNKEDIVSAS-------------TDSQLKLWNINKPN-CLRS--FVG-----HINDKNFVGLAT--DGD-YV-   90 (221)
Q Consensus        36 ~i~~~~~~~~~~l~s~~-------------~d~~v~~wd~~~~~-~~~~--~~~-----~~~~v~~~~~~~--~~~-~l-   90 (221)
                      ..-.++..|++.+++++             .+|.|.++|..+.. ....  +.+     ..-....+.+.+  ++. +| 
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~  130 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  130 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence            34566667777766665             68999999987431 1112  222     122456666655  343 33 


Q ss_pred             EEecC--CCeEEEEECCCCeeeEEEEeecccceeEeeEEEe-eCceEEEEEecCCCEEEEecC-----------------
Q psy10662         91 ACGSE--NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH-INDKNFVGLATDGDYVACGSE-----------------  150 (221)
Q Consensus        91 ~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-----------------  150 (221)
                      ++-..  +..|.+|++........         .+..+.+. -...+.+.+.++|.+.++..-                 
T Consensus       131 Vvnh~~~~s~ielf~~d~~~~~~~---------~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~  201 (355)
T 3sre_A          131 VVNHPGSSSTVEVFKFQEEEKSLL---------HLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLA  201 (355)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEE---------EEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCC
T ss_pred             EEECCCCCCeEEEEEEECCCCEEE---------EEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCC
Confidence            33222  45677776543221111         11222221 235778999999987776541                 


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECC
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIP  217 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~  217 (221)
                      .|.|+-+|.  ++.. .+               ...-...+.++|+||++.|+.+. ..+.|..|++.
T Consensus       202 ~g~vyr~d~--~~~~-~~---------------~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~  251 (355)
T 3sre_A          202 WSFVTYYSP--NDVR-VV---------------AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH  251 (355)
T ss_dssp             CEEEEEECT--TCCE-EE---------------EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             ccEEEEEEC--CeEE-Ee---------------ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence            133433332  1111 10               01123468999999998777654 57899999986

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.75  E-value=0.012  Score=48.00  Aligned_cols=159  Identities=7%  Similarity=-0.133  Sum_probs=90.0

Q ss_pred             cCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec-C-CCeEEEEECCCCee
Q psy10662         34 RKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS-E-NNSLYIYYKGLSKH  109 (221)
Q Consensus        34 ~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~v~iwd~~~~~~  109 (221)
                      ......|++.+ ++. +++-...+.|.+.++........+.........|++.|.+.+|+.+. . .+.|...++.....
T Consensus       470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~  549 (791)
T 3m0c_C          470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  549 (791)
T ss_dssp             CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred             CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce
Confidence            34567788875 434 55666788999999865443332333334578999999765554433 3 36788888764332


Q ss_pred             eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCceeeeeeeccccccccccccccccc
Q psy10662        110 MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNE  188 (221)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (221)
                      . .+            ..........|++++.+..|+.+ ...+.|..+++........+. ..            ..-.
T Consensus       550 ~-~l------------v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~-~~------------~~l~  603 (791)
T 3m0c_C          550 Y-SL------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-DE------------KRLA  603 (791)
T ss_dssp             E-EE------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-CT------------TTTS
T ss_pred             E-EE------------EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEec-CC------------CccC
Confidence            2 11            11223467889999766665555 445678888875443322221 00            0111


Q ss_pred             ceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ...+|++.. ++++++-...+.|...+..+|
T Consensus       604 ~P~glav~~-~~lYwtD~~~~~I~~~dk~tG  633 (791)
T 3m0c_C          604 HPFSLAVFE-DKVFWTDIINEAIFSANRLTG  633 (791)
T ss_dssp             SEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred             CCCEEEEeC-CEEEEEECCCCEEEEEeCCCC
Confidence            233555533 344455556677777775544

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.74  E-value=0.0056  Score=44.31  Aligned_cols=159  Identities=9%  Similarity=0.000  Sum_probs=83.5

Q ss_pred             ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee-eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeE
Q psy10662         33 HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH  111 (221)
Q Consensus        33 ~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~  111 (221)
                      ....+..+.+.+++.++..+.+|.+..-+-..++.-..+ ......+..+.+.+++..++ ++.+|.+.+.+...++.-.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~  239 (327)
T 2xbg_A          161 AIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWG  239 (327)
T ss_dssp             CCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEEC
T ss_pred             CCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeE
Confidence            445688899988777666666666544321112221111 22345678888998887654 4457777665422222211


Q ss_pred             EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccccee
Q psy10662        112 AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVS  191 (221)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  191 (221)
                      .+     ...   .+ .....+..+.+.+++.+++++. ++.+ ++..+.++.-            ............+.
T Consensus       240 ~~-----~~~---~~-~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW------------~~~~~~~~~~~~~~  296 (327)
T 2xbg_A          240 EL-----LSP---LR-RNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTW------------QQDVDVKKVPSNFY  296 (327)
T ss_dssp             CC-----BCT---TS-SCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSC------------EECGGGTTSSSCCC
T ss_pred             ec-----cCC---cc-cCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCccc------------EEcCccCCCCCCeE
Confidence            10     000   00 0123477888888877766655 5655 2333323211            11111111234567


Q ss_pred             EEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        192 AVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       192 ~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      .+.|.+++. +++++.+|.|.-++-
T Consensus       297 ~v~~~~~~~-~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          297 KILFFSPDQ-GFILGQKGILLRYVT  320 (327)
T ss_dssp             EEEEEETTE-EEEECSTTEEEEECC
T ss_pred             EEEEECCCc-eEEEcCCceEEEEcC
Confidence            888876655 555567888776653

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.72  E-value=0.0065  Score=44.48  Aligned_cols=167  Identities=12%  Similarity=0.167  Sum_probs=93.2

Q ss_pred             CCCeEEEEEecCCceeeEE--EEe-----ccCceEEEEEec--CC--cEEEec---CCCcEEEEEcCCCcc----ceeee
Q psy10662         11 ADHCVHYYDLRNTKEALAV--FKG-----HRKAVSYVKFLN--KE--DIVSAS---TDSQLKLWNINKPNC----LRSFV   72 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~--~~~-----~~~~i~~~~~~~--~~--~l~s~~---~d~~v~~wd~~~~~~----~~~~~   72 (221)
                      .+|.|.++|+.+.......  +.+     ..-....+.+.+  ++  +|+.+.   .+.++.+|++.....    +..+.
T Consensus        81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~  160 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR  160 (355)
T ss_dssp             -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred             CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence            6899999998632111222  222     223567777754  23  354442   256788888765322    22222


Q ss_pred             cc-ccceeEEEEeCCCCEEEEecC-----------------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceE
Q psy10662         73 GH-INDKNFVGLATDGDYVACGSE-----------------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKN  134 (221)
Q Consensus        73 ~~-~~~v~~~~~~~~~~~l~~~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  134 (221)
                      +. -...+.+.+.++|.+.++...                 .|.|.-+|..  +              ...+...-...+
T Consensus       161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~--------------~~~~~~~l~~pN  224 (355)
T 3sre_A          161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D--------------VRVVAEGFDFAN  224 (355)
T ss_dssp             CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C--------------CEEEEEEESSEE
T ss_pred             cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e--------------EEEeecCCcccC
Confidence            21 235788999999987776541                 1333333331  1              111233345678


Q ss_pred             EEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEec
Q psy10662        135 FVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAAN  206 (221)
Q Consensus       135 ~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~  206 (221)
                      .++|+||++.++.+. ..+.|..|++.....+...+      ..       ......-.+++++ +|++.+++.
T Consensus       225 Gia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~------~~-------~~~g~PDGi~vD~e~G~lwva~~  285 (355)
T 3sre_A          225 GINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLR------VL-------SFDTLVDNISVDPVTGDLWVGCH  285 (355)
T ss_dssp             EEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE------EE-------ECSSEEEEEEECTTTCCEEEEEE
T ss_pred             cceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCE------EE-------eCCCCCceEEEeCCCCcEEEEec
Confidence            999999998776554 57889999986432221111      00       0123456788888 588777554

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.67  E-value=0.013  Score=46.37  Aligned_cols=180  Identities=13%  Similarity=0.059  Sum_probs=100.6

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccce-eeeccccceeEEEEeCCC
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLR-SFVGHINDKNFVGLATDG   87 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~~   87 (221)
                      ..+.|+..++.........+...-.....++|++ ++.|+ +-...+.|..+++....... .+...-.....+++.+.+
T Consensus        16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~   95 (619)
T 3s94_A           16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG   95 (619)
T ss_dssp             CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred             ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence            5678999888732212222223345678999996 55555 44457788888886553222 222222457889999855


Q ss_pred             C-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCCCCc
Q psy10662         88 D-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKH  164 (221)
Q Consensus        88 ~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~  164 (221)
                      . ++++-...+.|.+.++..... ..+            ....-.....++++|.+..|.....  .+.|...++.-...
T Consensus        96 ~~ly~~d~~~~~I~v~~~dG~~~-~~l------------~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~  162 (619)
T 3s94_A           96 EKLYWTDSETNRIEVSNLDGSLR-KVL------------FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR  162 (619)
T ss_dssp             TEEEEEETTTTEEEEEETTSCSC-EEE------------ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             CEEEEEeCCCCEEEEEECCCCCE-EEE------------EeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce
Confidence            4 556666788999999865432 111            1122345678999987555544442  35666665543222


Q ss_pred             eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      .....               ..-...+.+++++++..|+.+ ...+.|...++..
T Consensus       163 ~~l~~---------------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG  202 (619)
T 3s94_A          163 FIIIN---------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG  202 (619)
T ss_dssp             EEEEC---------------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred             EEEEe---------------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence            11110               112346789999876555554 4567888887764

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.65  E-value=0.0074  Score=42.96  Aligned_cols=186  Identities=15%  Similarity=0.161  Sum_probs=88.0

Q ss_pred             CCceEEEEeCC-----CeEEEEEecCCce--eeEEEEeccCceEEEEEecCCcEEEecCCC-----cEEEEEcCCCccce
Q psy10662          2 NSCHLAFGSAD-----HCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKEDIVSASTDS-----QLKLWNINKPNCLR   69 (221)
Q Consensus         2 ~~~~l~~~~~d-----g~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~-----~v~~wd~~~~~~~~   69 (221)
                      ++.+++.|+.+     ..+.+||.. +.+  .+..+...... .+++...+..++.|+.++     .+.+||+.+.+-..
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~  138 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPV-KDQWTSVANMRDRRST-LGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH  138 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETT-TTEEEEECCCSSCCBS-CEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred             CCEEEEEeCcCCCccccceEEECCC-CCceeeCCCCCccccc-eEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence            34566676654     357788876 322  11111111111 222233455566666543     47788887654322


Q ss_pred             e--eeccccceeEEEEeCCCCEEEEecCC-------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662         70 S--FVGHINDKNFVGLATDGDYVACGSEN-------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT  140 (221)
Q Consensus        70 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  140 (221)
                      .  +...... .+++. -++++++.|+.+       ..+.+||+.+.+....-           .+....... ++. .-
T Consensus       139 ~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-----------~~p~~r~~~-~~~-~~  203 (302)
T 2xn4_A          139 VAPMNTRRSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-----------EMSTRRSGA-GVG-VL  203 (302)
T ss_dssp             ECCCSSCCBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-----------CCSSCCBSC-EEE-EE
T ss_pred             cCCCCCcccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-----------CCccccccc-cEE-EE
Confidence            1  1111111 12222 255666666542       34788888776543221           011001111 121 22


Q ss_pred             CCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC-----e
Q psy10662        141 DGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG-----I  210 (221)
Q Consensus       141 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~  210 (221)
                      ++++++.|+.+     ..+.+||..+.+-...      .....   ....|    ..+.  .++++++.|+.++     .
T Consensus       204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~------~~~~~---~r~~~----~~~~--~~~~i~v~GG~~~~~~~~~  268 (302)
T 2xn4_A          204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV------ADMNM---CRRNA----GVCA--VNGLLYVVGGDDGSCNLAS  268 (302)
T ss_dssp             TTEEEEECCBSSSSBCCCEEEEETTTTEEEEE------CCCSS---CCBSC----EEEE--ETTEEEEECCBCSSSBCCC
T ss_pred             CCEEEEECCCCCCcccceEEEEeCCCCCEeeC------CCCCC---ccccC----eEEE--ECCEEEEECCcCCCccccc
Confidence            56777877764     3577888766532211      11100   00111    1222  2677777777543     4


Q ss_pred             EEEEECCcc
Q psy10662        211 IKIYVIPIR  219 (221)
Q Consensus       211 i~iw~~~~~  219 (221)
                      +.+||+.+.
T Consensus       269 v~~yd~~~~  277 (302)
T 2xn4_A          269 VEYYNPTTD  277 (302)
T ss_dssp             EEEEETTTT
T ss_pred             EEEEcCCCC
Confidence            888988764

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.63  E-value=0.015  Score=46.01  Aligned_cols=180  Identities=9%  Similarity=-0.053  Sum_probs=94.6

Q ss_pred             CCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .+.|..++++........+...-.....+++.+ ++. +++-...+.|.+.++........+...-.....+++.|.+.+
T Consensus        61 ~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~  140 (619)
T 3s94_A           61 EEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGF  140 (619)
T ss_dssp             TTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTE
T ss_pred             CCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCe
Confidence            445555555421111222222224678899986 454 445566889999998654332222233345678999987655


Q ss_pred             EEEec--CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCcee
Q psy10662         90 VACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHMH  166 (221)
Q Consensus        90 l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~  166 (221)
                      |+.+.  ..+.|...++..... ..+            ....-.....+++++++..|..+ ...+.|..+|+.......
T Consensus       141 ly~tD~g~~~~I~r~~~dG~~~-~~l------------~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~  207 (619)
T 3s94_A          141 MYWTDWGEVPKIERAGMDGSSR-FII------------INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA  207 (619)
T ss_dssp             EEEEECSSSCEEEEEETTSCSC-EEE------------ECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-
T ss_pred             EEEeccCCCCEEEEEECCCCce-EEE------------EeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEE
Confidence            44333  245666666543221 111            11123457789999876555544 455678888775432211


Q ss_pred             eeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        167 AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ...               +......++++.++ .+.++-...+.|...|..+++
T Consensus       208 ~~~---------------~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~  245 (619)
T 3s94_A          208 VVK---------------GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGE  245 (619)
T ss_dssp             -----------------------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred             EEe---------------CCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence            110               00111245677655 444554567788888876653

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.55  E-value=0.01  Score=42.19  Aligned_cols=186  Identities=15%  Similarity=0.107  Sum_probs=89.8

Q ss_pred             CCceEEEEe-CC-----CeEEEEEecCCce--eeEEEEeccCceEEEEEecCCcEEEecCC-----CcEEEEEcCCCc--
Q psy10662          2 NSCHLAFGS-AD-----HCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKEDIVSASTD-----SQLKLWNINKPN--   66 (221)
Q Consensus         2 ~~~~l~~~~-~d-----g~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~s~~~d-----~~v~~wd~~~~~--   66 (221)
                      ++.+++.|+ .+     ..+.+||+. +.+  .+..+..... -.+++...+..++.|+.+     ..+.+||+.+.+  
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~-~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~   91 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPK-TQEWSFLPSITRKRR-YVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG   91 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETT-TTEEEECCCCSSCCB-SCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCC-CCeEEeCCCCChhhc-cccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence            345677776 33     368888886 332  1111111111 122233345556666654     468899987765  


Q ss_pred             -ccee--eeccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEE
Q psy10662         67 -CLRS--FVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL  138 (221)
Q Consensus        67 -~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  138 (221)
                       -...  +...... .++.. .++.+++.|+.+     ..+.+||+.+.+....-           .+......-..+  
T Consensus        92 ~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-----------~~p~~r~~~~~~--  156 (301)
T 2vpj_A           92 VWYSVAPMNVRRGL-AGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG-----------DMQTAREGAGLV--  156 (301)
T ss_dssp             CCEEECCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE-----------ECSSCCBSCEEE--
T ss_pred             eeEECCCCCCCccc-eeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECC-----------CCCCCcccceEE--
Confidence             2221  1111111 12222 256667777643     35788888776543221           011001111112  


Q ss_pred             ecCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----
Q psy10662        139 ATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----  208 (221)
Q Consensus       139 ~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----  208 (221)
                      .-++++++.|+.+     ..+.+||..+.+-...      ...       .........+.+  ++++++.|+.+     
T Consensus       157 ~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~------~~~-------p~~r~~~~~~~~--~~~i~v~GG~~~~~~~  221 (301)
T 2vpj_A          157 VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV------TPM-------ATKRSGAGVALL--NDHIYVVGGFDGTAHL  221 (301)
T ss_dssp             EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE------CCC-------SSCCBSCEEEEE--TTEEEEECCBCSSSBC
T ss_pred             EECCEEEEECCCCCCcccceEEEEeCCCCcEEeC------CCC-------CcccccceEEEE--CCEEEEEeCCCCCccc
Confidence            2267777777754     3577777766532211      100       001111112222  56777777653     


Q ss_pred             CeEEEEECCcc
Q psy10662        209 GIIKIYVIPIR  219 (221)
Q Consensus       209 g~i~iw~~~~~  219 (221)
                      ..+.+||+.+.
T Consensus       222 ~~v~~yd~~~~  232 (301)
T 2vpj_A          222 SSVEAYNIRTD  232 (301)
T ss_dssp             CCEEEEETTTT
T ss_pred             ceEEEEeCCCC
Confidence            46888888765

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.53  E-value=0.0084  Score=40.59  Aligned_cols=185  Identities=11%  Similarity=0.057  Sum_probs=95.4

Q ss_pred             CceEEEEeCCCeEEEEEecCCce-----eeEEEEec--cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKE-----ALAVFKGH--RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~-----~~~~~~~~--~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      ..+|.+...| +++.=.......     ....+. .  =..+..++|+|++.|.+. .+|.+.-.+..+.....-+ +..
T Consensus         4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG-~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~-~s~   79 (236)
T 1tl2_A            4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIG-KGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWM-GRA   79 (236)
T ss_dssp             CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEE-SSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHH-HHC
T ss_pred             ceEEEEEeCC-cEEecCCCCCcccchhhhccccC-ccccccceeEEECCCccEEEE-eCCeEEEECCCCCCccccc-ccc
Confidence            4567777777 655433331110     122222 2  246889999998888888 7887776665442221111 111


Q ss_pred             cc--------eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         76 ND--------KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        76 ~~--------v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                      ..        -.++.|.|+|.+.++  .||.|.-++--+.... .  |-. ....+  -..--..+..+.|.|+|.+.++
T Consensus        80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~-~--Wl~-~a~~v--g~~gw~~~~~lff~p~G~Lyav  151 (236)
T 1tl2_A           80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD-N--WIA-RATEV--GSGGWSGFKFLFFHPNGYLYAV  151 (236)
T ss_dssp             EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-C--HHH-HSEEE--ECSSGGGEEEEEECTTSCEEEE
T ss_pred             cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC-c--eec-cccEe--ccCCCCceEEEEECCCceEEEE
Confidence            22        378899999998777  5588876654221110 0  000 00000  0011146788999999988777


Q ss_pred             ecCCCeEEEEEcCCCCceeeeeeeccccccccccccc-ccccceeEEEEcCCCcEEEEecCCCeEE
Q psy10662        148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED-DTNEFVSAVCWRQLSRVLVAANSQGIIK  212 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~  212 (221)
                      .  |+.++-....+....         ..+.....+. ......+-+.|.+++.+.++.  +|.+.
T Consensus       152 ~--dg~lyr~~~P~~~~~---------~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y  204 (236)
T 1tl2_A          152 H--GQQFYKALPPVSNQD---------NWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFY  204 (236)
T ss_dssp             E--TTEEEEECCCSSTTC---------CHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred             e--CCcEEecCCCCCCCc---------ccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence            7  776543221111100         0000000000 112233457799999877776  77443

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.47  E-value=0.0069  Score=51.99  Aligned_cols=198  Identities=11%  Similarity=0.174  Sum_probs=110.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-Cccceeeecc----c
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-PNCLRSFVGH----I   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~----~   75 (221)
                      |..+.+|.-. ..++.|||++ ++..++.+.- ..+|.-=.|-+...|+..+ +..|.-|++.. ..+.+.+..|    .
T Consensus        75 P~~~iiALra-g~~lQiFnl~-~k~klks~~~-~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~  150 (1630)
T 1xi4_A           75 PASKVIALKA-GKTLQIFNIE-MKSKMKAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG  150 (1630)
T ss_pred             CCcceEEEec-CCeEEEeehH-Hhhhhccccc-CCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhccc
Confidence            4455666653 6789999998 6666666653 4466666676656655443 46799999964 3455555444    3


Q ss_pred             cceeEEEEeCCCCEEEEec-------CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe--cC-CCEE
Q psy10662         76 NDKNFVGLATDGDYVACGS-------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA--TD-GDYV  145 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~~~l  145 (221)
                      ..|..-..+++.+.++..|       -.|.+.+|..+.+..              +.+.||......+...  +. .+++
T Consensus       151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s--------------Q~iegha~~F~~~~~~~~~~~~~l~  216 (1630)
T 1xi4_A          151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--------------QPIEGHAASFAQFKMEGNAEESTLF  216 (1630)
T ss_pred             CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc--------------hhhhHhHhhhheeccCCCCCCceEE
Confidence            4566667778888655332       246677776654322              1233444333222221  11 1122


Q ss_pred             EEec---CCCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        146 ACGS---ENNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       146 ~~~~---~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +-+.   ..+.+.+-++... .....+.    .+......+.........++..++....++.-+.-|.|+++|+.|+.
T Consensus       217 ~f~~~~~~g~kLhi~Ei~~~~~~~~~f~----kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~  291 (1630)
T 1xi4_A          217 CFAVRGQAGGKLHIIEVGTPPTGNQPFP----KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT  291 (1630)
T ss_pred             EEEEecCCCceEEEEecCCCccCCCCCc----cccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccch
Confidence            2111   1367888887543 1111111    00000011111223334578888888888888999999999999986

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.47  E-value=0.0029  Score=45.96  Aligned_cols=110  Identities=12%  Similarity=0.031  Sum_probs=71.8

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEec-cCceEEEEEe--c-CCcEEEe--cCCCcEEEEEcCCCccceeeecccc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH-RKAVSYVKFL--N-KEDIVSA--STDSQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~~--~-~~~l~s~--~~d~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      +.+++.++.||.|.-+|.. +++....++.. ..++....-.  + ++.++.+  ..||.|..++..++.....+... .
T Consensus        10 ~~~V~v~t~dG~l~Ald~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~-~   87 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRR-NGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR-Q   87 (339)
T ss_dssp             EEEEEEEETTSCEEEEETT-TTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH-H
T ss_pred             CCEEEEEeCCCeEEEEECC-CCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc-c
Confidence            4578899999999999987 78888887754 1233322111  1 2234433  58999999998887544333211 1


Q ss_pred             cee--EEEEe-----------CCCCEEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662         77 DKN--FVGLA-----------TDGDYVACGSENNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        77 ~v~--~~~~~-----------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  114 (221)
                      .+.  -+...           ..+..+++|+.+|.+...|+++++.+..+.
T Consensus        88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~  138 (339)
T 2be1_A           88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG  138 (339)
T ss_dssp             HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred             ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence            110  01111           145678999999999999999999998763

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.44  E-value=0.028  Score=44.59  Aligned_cols=182  Identities=5%  Similarity=-0.108  Sum_probs=101.9

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL   83 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~   83 (221)
                      +.+-..++.|..++++ .......+.........|++.+ ++. +++-...+.|.+.++........+...-.....+++
T Consensus        52 ywtD~~~~~I~r~~~~-g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iav  130 (628)
T 4a0p_A           52 YWTDISLKTISRAFMN-GSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALAL  130 (628)
T ss_dssp             EEEETTTTEEEEEETT-SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEE
T ss_pred             EEEECCCCeEEEEECC-CCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEE
Confidence            3343445666666665 2222222222223567888874 444 456566788999998654322222223345689999


Q ss_pred             eCCCCEEEEec--CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcC
Q psy10662         84 ATDGDYVACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKG  160 (221)
Q Consensus        84 ~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~  160 (221)
                      .|...+|+...  ..+.|...++...... .             +...-.....++++++++.|..+ ...+.|..+|+.
T Consensus       131 dp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~-------------l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d  196 (628)
T 4a0p_A          131 DPAEGFMYWTEWGGKPKIDRAAMDGSERT-T-------------LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML  196 (628)
T ss_dssp             ETTTTEEEEEECSSSCEEEEEETTSCSCE-E-------------EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             ccCCCeEEEeCCCCCCEEEEEeCCCCceE-E-------------EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence            98655544433  3567777776543321 1             11223467889999976655555 456789999886


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .... ..+.               .......++++.. +.++++-...+.|...|..++
T Consensus       197 G~~~-~v~~---------------~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg  238 (628)
T 4a0p_A          197 GLNR-EVIA---------------DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG  238 (628)
T ss_dssp             SCSC-EEEE---------------ECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred             CCce-EEee---------------ccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence            5433 1111               0111234677654 455555556788888886554

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.44  E-value=0.018  Score=42.17  Aligned_cols=108  Identities=10%  Similarity=0.062  Sum_probs=61.9

Q ss_pred             ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcc--ceeee---ccccceeEEEEeCC---CCEE-EEecCC-----Ce
Q psy10662         33 HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNC--LRSFV---GHINDKNFVGLATD---GDYV-ACGSEN-----NS   98 (221)
Q Consensus        33 ~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l-~~~~~d-----~~   98 (221)
                      .-.....++|.|++.++.+..+|.|.+++  .++.  +..+.   ........++++|+   +..| ++-...     +.
T Consensus        29 ~l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~  106 (352)
T 2ism_A           29 GLEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ  106 (352)
T ss_dssp             CCSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred             CCCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence            34457899999988888888889999998  3331  11111   12345789999998   4444 433322     56


Q ss_pred             EEEEECCCCeeeEEEEeecccceeEeeEE---EeeCceEEEEEecCCCEEEEec
Q psy10662         99 LYIYYKGLSKHMHAYRFDTVRSMLESSFV---GHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        99 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                      |..++....+. ...      ......+.   ........++|.|+|.+.++-+
T Consensus       107 v~r~~~~~~~~-~~~------~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A          107 VVRLRHLGERG-VLD------RVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EEEEEECSSCE-EEE------EEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred             EEEEEeCCCCc-Cce------EEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence            77777654321 000      00111111   1112345799999998776644

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.35  E-value=0.02  Score=40.75  Aligned_cols=185  Identities=10%  Similarity=0.096  Sum_probs=87.1

Q ss_pred             CceEEEEeCC----CeEEEEEecCCceeeEEEEeccCc--eEEEEEecCCcEEEecCC-----CcEEEEEcCCCcccee-
Q psy10662          3 SCHLAFGSAD----HCVHYYDLRNTKEALAVFKGHRKA--VSYVKFLNKEDIVSASTD-----SQLKLWNINKPNCLRS-   70 (221)
Q Consensus         3 ~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~l~s~~~d-----~~v~~wd~~~~~~~~~-   70 (221)
                      +.+++.|+.+    ..+..||+. +.+ -..+.....+  -.+++...+..++.|+.+     ..+.+||..+.+-... 
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~-~~~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~   93 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFK-EER-WHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA   93 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETT-TTE-EEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred             CEEEEECCCCCCCCCcEEEEcCc-CCc-EeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence            4566677654    357888887 332 1222111111  112233345556666654     3578888876543221 


Q ss_pred             -eeccccceeEEEEeCCCCEEEEecCCC-----eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662         71 -FVGHINDKNFVGLATDGDYVACGSENN-----SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY  144 (221)
Q Consensus        71 -~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  144 (221)
                       +...... .+++. -++..++.|+.++     .+.+||+.+.+....-           .+....... +++. -++++
T Consensus        94 ~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-----------~~p~~r~~~-~~~~-~~~~i  158 (302)
T 2xn4_A           94 NMRDRRST-LGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-----------PMNTRRSSV-GVGV-VGGLL  158 (302)
T ss_dssp             CCSSCCBS-CEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC-----------CCSSCCBSC-EEEE-ETTEE
T ss_pred             CCCccccc-eEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC-----------CCCCcccCc-eEEE-ECCEE
Confidence             1111111 12222 2566667776543     4777887766543221           011101111 1111 25667


Q ss_pred             EEEecCC-------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----CeEE
Q psy10662        145 VACGSEN-------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----GIIK  212 (221)
Q Consensus       145 l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~  212 (221)
                      ++.|+.+       ..+.+||..+.+-...      ....   .....|    ..+.+  ++++++.|+.+     ..+.
T Consensus       159 yv~GG~~~~~~~~~~~~~~yd~~~~~W~~~------~~~p---~~r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~  223 (302)
T 2xn4_A          159 YAVGGYDVASRQCLSTVECYNATTNEWTYI------AEMS---TRRSGA----GVGVL--NNLLYAVGGHDGPLVRKSVE  223 (302)
T ss_dssp             EEECCEETTTTEECCCEEEEETTTTEEEEE------CCCS---SCCBSC----EEEEE--TTEEEEECCBSSSSBCCCEE
T ss_pred             EEEeCCCCCCCccccEEEEEeCCCCcEEEC------CCCc---cccccc----cEEEE--CCEEEEECCCCCCcccceEE
Confidence            7777643       3477777765532211      1100   011111    12222  57777777654     3688


Q ss_pred             EEECCcc
Q psy10662        213 IYVIPIR  219 (221)
Q Consensus       213 iw~~~~~  219 (221)
                      +||+.+.
T Consensus       224 ~yd~~~~  230 (302)
T 2xn4_A          224 VYDPTTN  230 (302)
T ss_dssp             EEETTTT
T ss_pred             EEeCCCC
Confidence            8888764

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.26  E-value=0.015  Score=41.71  Aligned_cols=105  Identities=10%  Similarity=-0.011  Sum_probs=52.0

Q ss_pred             cCCcEEEecCC--------CcEEEEEcCCCccce--eeeccccceeEEEEeCCCCEEEEecC-C-----CeEEEEECCCC
Q psy10662         44 NKEDIVSASTD--------SQLKLWNINKPNCLR--SFVGHINDKNFVGLATDGDYVACGSE-N-----NSLYIYYKGLS  107 (221)
Q Consensus        44 ~~~~l~s~~~d--------~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~v~iwd~~~~  107 (221)
                      .+..++.|+.+        ..+.+||..+.+-..  .+...... .+++. .++++++.|+. +     ..+.+||+.+.
T Consensus        98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~  175 (315)
T 4asc_A           98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF  175 (315)
T ss_dssp             TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred             CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence            44455666632        458889987754321  11111111 12222 35666677765 2     46888888876


Q ss_pred             eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-----eEEEEEcCCCC
Q psy10662        108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-----SLYIYYKGLSK  163 (221)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~  163 (221)
                      +....      ..     +......-..+  .-++++++.|+.++     .+.+||..+.+
T Consensus       176 ~W~~~------~~-----~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  223 (315)
T 4asc_A          176 EWKEL------AP-----MQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDNK  223 (315)
T ss_dssp             EEEEC------CC-----CSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred             eEEEC------CC-----CCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCCCe
Confidence            54321      00     11001111112  22667777777654     46777776553

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.26  E-value=0.026  Score=40.28  Aligned_cols=146  Identities=12%  Similarity=0.071  Sum_probs=71.3

Q ss_pred             cCCcEEEecCC-----CcEEEEEcCCCccce--eeeccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeE
Q psy10662         44 NKEDIVSASTD-----SQLKLWNINKPNCLR--SFVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMH  111 (221)
Q Consensus        44 ~~~~l~s~~~d-----~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~  111 (221)
                      .+..++.|+.+     ..+.+||+.+.+-..  .+......-..+.+  ++.+++.|+.+     ..+.+||+.+.+...
T Consensus       121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~  198 (308)
T 1zgk_A          121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM  198 (308)
T ss_dssp             TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence            44455566543     457888887654322  11111111122222  56667777654     458888887765432


Q ss_pred             EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662        112 AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT  186 (221)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (221)
                      .      ..     +.........+.+  ++++++.|+.+     ..+.+||+.+.+-..      ...       ....
T Consensus       199 ~------~~-----~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~------~~~-------~p~~  252 (308)
T 1zgk_A          199 I------TA-----MNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF------VAP-------MKHR  252 (308)
T ss_dssp             C------CC-----CSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE------CCC-------CSSC
T ss_pred             C------CC-----CCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE------CCC-------CCCC
Confidence            1      00     1111111112222  66777778764     457788876653221      111       0011


Q ss_pred             ccceeEEEEcCCCcEEEEecCC-----CeEEEEECCcc
Q psy10662        187 NEFVSAVCWRQLSRVLVAANSQ-----GIIKIYVIPIR  219 (221)
Q Consensus       187 ~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~  219 (221)
                      ......+.+  ++++++.|+.+     ..+.+||+.+.
T Consensus       253 r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~  288 (308)
T 1zgk_A          253 RSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD  288 (308)
T ss_dssp             CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             ccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence            111112222  67777777643     45788888765

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.20  E-value=0.036  Score=40.66  Aligned_cols=115  Identities=12%  Similarity=0.004  Sum_probs=64.1

Q ss_pred             EEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCc-cceeee---ccccceeEEEEeCC----CCEEEEecC---C-
Q psy10662         29 VFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN-CLRSFV---GHINDKNFVGLATD----GDYVACGSE---N-   96 (221)
Q Consensus        29 ~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~-~~~~~~---~~~~~v~~~~~~~~----~~~l~~~~~---d-   96 (221)
                      .+...-.....|+|.|++.|+.+..+|.|+++|. +++ .+..+.   ........++++|+    +.++++-+.   + 
T Consensus        23 ~va~~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~  101 (354)
T 3a9g_A           23 EVASDLEVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG  101 (354)
T ss_dssp             EEECSCSCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred             EEeCCCCCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence            3333345678999999888888888899999973 444 221111   12345789999997    444343332   3 


Q ss_pred             ---CeEEEEECCCCe-eeEEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEecC
Q psy10662         97 ---NSLYIYYKGLSK-HMHAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        97 ---~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                         +.|..|+..... .+...      ......+.. .......++|.|+|.+.++-+.
T Consensus       102 ~~~~~v~r~~~~~~~~~~~~~------~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~  154 (354)
T 3a9g_A          102 HIRNRVIRGRLDGSTFKLKEV------KTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD  154 (354)
T ss_dssp             CEEEEEEEEEECSSSCCEEEE------EEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred             CcceEEEEEEECCCCcCcCcc------EEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence               456667655331 00000      001111111 1123457999999987776543

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.17  E-value=0.033  Score=39.69  Aligned_cols=104  Identities=9%  Similarity=0.149  Sum_probs=52.8

Q ss_pred             CceEEEEeCC--CeEEEEEecCCc-eeeEEEEeccCceEEEEEecCCcEEEecCC----CcEEEEEcCCCcccee--eec
Q psy10662          3 SCHLAFGSAD--HCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNKEDIVSASTD----SQLKLWNINKPNCLRS--FVG   73 (221)
Q Consensus         3 ~~~l~~~~~d--g~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d----~~v~~wd~~~~~~~~~--~~~   73 (221)
                      +.+++.|+.+  ..+.+||..+.. ..+..+...... .+++...+..++.|+.+    ..+.+||..+.+-...  +..
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~   90 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRD-AACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT   90 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBS-CEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccce-eEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence            3456666653  578888887321 111111111111 12222344556666654    5688899877643221  111


Q ss_pred             cccceeEEEEeCCCCEEEEecCC------CeEEEEECCCCee
Q psy10662         74 HINDKNFVGLATDGDYVACGSEN------NSLYIYYKGLSKH  109 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~  109 (221)
                      .......+.  -++.+++.|+.+      ..+.+||..+.+.
T Consensus        91 ~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W  130 (306)
T 3ii7_A           91 PRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESW  130 (306)
T ss_dssp             CCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred             cccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence            111112222  256677777654      4588889887754

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.14  E-value=0.036  Score=39.55  Aligned_cols=186  Identities=13%  Similarity=0.045  Sum_probs=87.5

Q ss_pred             CCceEEEEeCC----CeEEEEEecCCceeeEEEEeccC--ceEEEEEecCCcEEEecC----C-----CcEEEEEcCCCc
Q psy10662          2 NSCHLAFGSAD----HCVHYYDLRNTKEALAVFKGHRK--AVSYVKFLNKEDIVSAST----D-----SQLKLWNINKPN   66 (221)
Q Consensus         2 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~l~s~~~----d-----~~v~~wd~~~~~   66 (221)
                      ++.+++.|+.+    ..+.+||.. +.+ -..+..-..  .-.+++...+..++.|+.    +     ..+.+||..+.+
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~-~~~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~  101 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPS-NGT-WLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ  101 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETT-TTE-EEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCC-CCe-EeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence            34566677642    367888876 332 111111110  111223334455666665    2     468888987654


Q ss_pred             cce--eeeccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe
Q psy10662         67 CLR--SFVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA  139 (221)
Q Consensus        67 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  139 (221)
                      -..  .+.........+.+  ++++++.|+.+     ..+.+||+.+.+....-           .+......-..+.+ 
T Consensus       102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-----------~~p~~r~~~~~~~~-  167 (308)
T 1zgk_A          102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA-----------PMLTRRIGVGVAVL-  167 (308)
T ss_dssp             EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECC-----------CCSSCCBSCEEEEE-
T ss_pred             EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECC-----------CCCccccceEEEEE-
Confidence            322  11111111122222  56666776643     35778888776543210           01111111112222 


Q ss_pred             cCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----C
Q psy10662        140 TDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----G  209 (221)
Q Consensus       140 ~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g  209 (221)
                       ++++++.|+.+     ..+.+||..+.+-...      ...       .........+.+  ++++++.|+.+     .
T Consensus       168 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~------~~~-------p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~  231 (308)
T 1zgk_A          168 -NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI------TAM-------NTIRSGAGVCVL--HNCIYAAGGYDGQDQLN  231 (308)
T ss_dssp             -TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC------CCC-------SSCCBSCEEEEE--TTEEEEECCBCSSSBCC
T ss_pred             -CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC------CCC-------CCccccceEEEE--CCEEEEEeCCCCCCccc
Confidence             56777777754     3477777765432111      110       011111122222  67777777654     4


Q ss_pred             eEEEEECCcc
Q psy10662        210 IIKIYVIPIR  219 (221)
Q Consensus       210 ~i~iw~~~~~  219 (221)
                      .+.+||+.+.
T Consensus       232 ~v~~yd~~~~  241 (308)
T 1zgk_A          232 SVERYDVETE  241 (308)
T ss_dssp             CEEEEETTTT
T ss_pred             eEEEEeCCCC
Confidence            6888888764

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.07  E-value=0.046  Score=39.53  Aligned_cols=147  Identities=11%  Similarity=0.070  Sum_probs=78.8

Q ss_pred             CceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee-eccccceeEEEEeCCCCEEEEecCCCeEEEEEC--CCCeeeE
Q psy10662         35 KAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYK--GLSKHMH  111 (221)
Q Consensus        35 ~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~--~~~~~~~  111 (221)
                      +.+..+.+.+++.++.++.++.|.. ....++.-... ......+..+.+.|++.+++.+...+..+-.|-  .+-+.+ 
T Consensus       122 ~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~-  199 (327)
T 2xbg_A          122 GSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH-  199 (327)
T ss_dssp             SCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE-
T ss_pred             CCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC-
Confidence            4567787776556555555665432 11223222222 234456888999998888777655443443442  122211 


Q ss_pred             EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccc-cccccce
Q psy10662        112 AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE-DDTNEFV  190 (221)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v  190 (221)
                                    .......+..+.+.+++++++ .+.+|.+++.+...++.     +..       .... ......+
T Consensus       200 --------------~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~t-----W~~-------~~~~~~~~~~~~  252 (327)
T 2xbg_A          200 --------------NRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSEN-----WGE-------LLSPLRRNSVGF  252 (327)
T ss_dssp             --------------ECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEE-----ECC-------CBCTTSSCCSCE
T ss_pred             --------------CCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCe-----eEe-------ccCCcccCCcce
Confidence                          012234677888889887665 44577776653221111     110       0000 0122347


Q ss_pred             eEEEEcCCCcEEEEecCCCeE
Q psy10662        191 SAVCWRQLSRVLVAANSQGII  211 (221)
Q Consensus       191 ~~~~~~~~~~~l~~~~~dg~i  211 (221)
                      .++.+.+++.+++++. +|.|
T Consensus       253 ~~v~~~~~~~~~~~g~-~g~i  272 (327)
T 2xbg_A          253 LDLAYRTPNEVWLAGG-AGAL  272 (327)
T ss_dssp             EEEEESSSSCEEEEES-TTCE
T ss_pred             EEEEecCCCEEEEEeC-CCeE
Confidence            8888998887777664 5655

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.05  E-value=0.049  Score=39.70  Aligned_cols=95  Identities=9%  Similarity=0.096  Sum_probs=42.7

Q ss_pred             CCceEEEEeCC-CeEEEEEecCCceeeEEEEecc---CceEEEEEecCCcEEEecC-C---------CcEEEEEcCCCcc
Q psy10662          2 NSCHLAFGSAD-HCVHYYDLRNTKEALAVFKGHR---KAVSYVKFLNKEDIVSAST-D---------SQLKLWNINKPNC   67 (221)
Q Consensus         2 ~~~~l~~~~~d-g~i~i~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~l~s~~~-d---------~~v~~wd~~~~~~   67 (221)
                      ++.+++.|+.+ ..+.+||+......-..+..-.   ..-.+++...+..++.|+. +         ..+.+||..+.+-
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W   98 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW   98 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence            34555666543 4678888752111111111111   1112233334555666665 2         4688899877543


Q ss_pred             ceeeecc-ccceeEEEEeCCCCEEEEecCC
Q psy10662         68 LRSFVGH-INDKNFVGLATDGDYVACGSEN   96 (221)
Q Consensus        68 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d   96 (221)
                      ...-... .......+...++++++.|+.+
T Consensus        99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~  128 (357)
T 2uvk_A           99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVN  128 (357)
T ss_dssp             EECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred             EECCCCCCcccccceEEEECCEEEEEeCcC
Confidence            2211101 1111111122466777777754

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.02  E-value=0.036  Score=37.57  Aligned_cols=119  Identities=13%  Similarity=0.115  Sum_probs=64.0

Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEe--eCceEEEEEecCCCEEEEecCCCe
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH--INDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      ..+..++|+|+|.+.++  .+|.+.-.+..+.+...   |-   ..  .+..+.  -..-..+.|.|+|.+.++  .||.
T Consensus        41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~---W~---~s--~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~  108 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN---WM---GR--AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDK  108 (236)
T ss_dssp             TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC---HH---HH--CEEEECSCGGGCSEEEECTTSCEEEE--ETTE
T ss_pred             ccceeEEECCCccEEEE--eCCeEEEECCCCCCccc---cc---cc--ccEecccccccceEEEECCCCCEEEe--CCCE
Confidence            36789999999987666  67766555543311100   00   00  000010  011367889999988887  5698


Q ss_pred             EEEEEcCCCCceeeeeeecccccccccccc-cccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        154 LYIYYKGLSKHMHAYRFDTVRSMLERDRNE-DDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      |+-++-.+.....         .+..-... ..--..+..+.|.|+|.+.+..  |+.++-+..+
T Consensus       109 iyr~~pP~~~~~~---------Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P  162 (236)
T 1tl2_A          109 LYKASPPQSDTDN---------WIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPP  162 (236)
T ss_dssp             EEEESCCCSTTCC---------HHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCC
T ss_pred             EEEeCCCcCCCCc---------eeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCC
Confidence            8877643221110         00000000 0011356889999999877776  7776544333

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=96.94  E-value=0.066  Score=39.19  Aligned_cols=92  Identities=7%  Similarity=0.019  Sum_probs=52.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEE---eccCceEEEEEecC----CcEEEecC-C-----CcEEEEEcCCCc-
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK---GHRKAVSYVKFLNK----EDIVSAST-D-----SQLKLWNINKPN-   66 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~---~~~~~i~~~~~~~~----~~l~s~~~-d-----~~v~~wd~~~~~-   66 (221)
                      |||+++++ ..+|.|++++ ....+.+..+.   ........|+++|+    +.|+.+.. .     +.|..++..... 
T Consensus        40 pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~  117 (352)
T 2ism_A           40 PDGGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERG  117 (352)
T ss_dssp             TTSCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCE
T ss_pred             CCCeEEEE-eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCc
Confidence            57775544 5679999888 31222222211   12346889999986    55554433 2     667788876431 


Q ss_pred             ----cce-eee---ccccceeEEEEeCCCCEEEEec
Q psy10662         67 ----CLR-SFV---GHINDKNFVGLATDGDYVACGS   94 (221)
Q Consensus        67 ----~~~-~~~---~~~~~v~~~~~~~~~~~l~~~~   94 (221)
                          .+. .+.   ........++|.|+|.++++.+
T Consensus       118 ~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A          118 VLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred             CceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence                111 122   1112346899999998766654

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.87  E-value=0.068  Score=38.95  Aligned_cols=25  Identities=4%  Similarity=-0.016  Sum_probs=15.4

Q ss_pred             CCCcEEEEecCCC------eEEEEECCcccC
Q psy10662        197 QLSRVLVAANSQG------IIKIYVIPIRVL  221 (221)
Q Consensus       197 ~~~~~l~~~~~dg------~i~iw~~~~~~l  221 (221)
                      .++++++.|+.++      .+.+++++++++
T Consensus       315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~  345 (357)
T 2uvk_A          315 WNNSLLIIGGETAGGKAVTDSVLITVKDNKV  345 (357)
T ss_dssp             ETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred             eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence            3677878777532      456668877653

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=96.75  E-value=0.22  Score=42.54  Aligned_cols=175  Identities=13%  Similarity=0.065  Sum_probs=98.9

Q ss_pred             CeEEEEEecCCceeeEEEEec-cCceEEEEE---ec--CCcEEEec----------CCCcEEEEEcCCCccceee-eccc
Q psy10662         13 HCVHYYDLRNTKEALAVFKGH-RKAVSYVKF---LN--KEDIVSAS----------TDSQLKLWNINKPNCLRSF-VGHI   75 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~---~~--~~~l~s~~----------~d~~v~~wd~~~~~~~~~~-~~~~   75 (221)
                      +.|++.|.. +.+.+..+.-. ...+.+++.   ..  ..+++.|.          ..|.|.+|++...+..... ...+
T Consensus       807 s~i~lidp~-t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~  885 (1158)
T 3ei3_A          807 HNLLIIDQH-TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK  885 (1158)
T ss_dssp             EEEEEEETT-TCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred             EEEEEEeCC-CCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence            467888876 55555554422 233555553   22  34566654          3578999998744322211 2346


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      +++++++-- +| +++++- ...|++|++...+.+. .  +          ..+-..+..+.....++++++|..-..|.
T Consensus       886 g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~-~--~----------~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~  949 (1158)
T 3ei3_A          886 GAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELR-T--E----------CNHYNNIMALYLKTKGDFILVGDLMRSVL  949 (1158)
T ss_dssp             SCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEE-E--E----------EEECCCSCEEEEEEETTEEEEEESSBCEE
T ss_pred             CcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEE-E--E----------eeccccEEEEEEeccCCEEEEEEhhheEE
Confidence            778887654 34 444443 4679999987655433 1  0          01111132333334577899998887777


Q ss_pred             EEEcCCCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        156 IYYKGLSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       156 ~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++..+.... +..+.             .+....+++++.|-.++ .++.+..+|.|.+...+.
T Consensus       950 ~~~y~~~~~~L~~~a-------------~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~  999 (1158)
T 3ei3_A          950 LLAYKPMEGNFEEIA-------------RDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS  999 (1158)
T ss_dssp             EEEEETTTTEEEEEE-------------ECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred             EEEEEcCCCeEEEEE-------------eecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence            765432211 11111             11245578888886554 667788899999988764

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.74  E-value=0.098  Score=38.30  Aligned_cols=52  Identities=17%  Similarity=0.169  Sum_probs=35.2

Q ss_pred             cCceEEEEEecCCc-EEEecCCCcEEEEEcCCCcc---ceee----eccccceeEEEEeCC
Q psy10662         34 RKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNC---LRSF----VGHINDKNFVGLATD   86 (221)
Q Consensus        34 ~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~---~~~~----~~~~~~v~~~~~~~~   86 (221)
                      -.....|+|.|++. ++.+...|.|++++.. ++.   +..+    .........++++|+
T Consensus        17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd   76 (353)
T 2g8s_A           17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD   76 (353)
T ss_dssp             ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred             CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence            34578999999877 8888888999999853 321   1111    112345688999995

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.57  E-value=0.12  Score=37.05  Aligned_cols=64  Identities=14%  Similarity=0.150  Sum_probs=33.6

Q ss_pred             cCCcEEEecCC-------CcEEEEEcCCCcccee--eeccccceeEEEEeCCCCEEEEecC------CCeEEEEECCCCe
Q psy10662         44 NKEDIVSASTD-------SQLKLWNINKPNCLRS--FVGHINDKNFVGLATDGDYVACGSE------NNSLYIYYKGLSK  108 (221)
Q Consensus        44 ~~~~l~s~~~d-------~~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~  108 (221)
                      .+..++.|+.+       ..+.+||..+.+-...  +...... .++.. .++.+++.|+.      -..+.+||+.+.+
T Consensus       109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  186 (318)
T 2woz_A          109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD  186 (318)
T ss_dssp             TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred             CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence            44556666653       2477888876543221  1111111 12222 35666666664      2358889988765


Q ss_pred             e
Q psy10662        109 H  109 (221)
Q Consensus       109 ~  109 (221)
                      .
T Consensus       187 W  187 (318)
T 2woz_A          187 W  187 (318)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=96.57  E-value=0.3  Score=41.78  Aligned_cols=142  Identities=16%  Similarity=0.152  Sum_probs=83.0

Q ss_pred             ceEEEEe----------CCCeEEEEEecCCceeeEE-EEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeee
Q psy10662          4 CHLAFGS----------ADHCVHYYDLRNTKEALAV-FKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV   72 (221)
Q Consensus         4 ~~l~~~~----------~dg~i~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~   72 (221)
                      .+|++|.          ..|.|++|++. .++.... -...+++|++++--.+ +|++| ....+++|++...+.++.-.
T Consensus       845 ~~lvVGTa~~~~~e~~~~~Gri~vf~v~-~~kL~lv~~~~v~g~v~al~~~~g-~Lla~-ig~~l~vy~l~~~~~L~~~~  921 (1158)
T 3ei3_A          845 TYFIVGTAMVYPEEAEPKQGRIVVFQYS-DGKLQTVAEKEVKGAVYSMVEFNG-KLLAS-INSTVRLYEWTTEKELRTEC  921 (1158)
T ss_dssp             CEEEEEEEECCTTCSSCCCEEEEEEEEE-TTEEEEEEEEEESSCEEEEEEETT-EEEEE-ETTEEEEEEECTTSCEEEEE
T ss_pred             EEEEEEeeecCCCCCCCCceEEEEEEEE-CCEEEEEEEEEcCCcCEEEeeeCC-EEEEE-cCCEEEEEECCCCceEEEEe
Confidence            5677765          35889999997 3332221 1235788999885544 54443 35889999997665444111


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEE--CCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYY--KGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      .+-..+..+.....+++++.|.--..|.++.  ....+.. .+           .-......++++.+-.++ .++.+..
T Consensus       922 ~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~-~~-----------a~D~~~~~vta~~~ld~~-t~l~aD~  988 (1158)
T 3ei3_A          922 NHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE-EI-----------ARDFNPNWMSAVEILDDD-NFLGAEN  988 (1158)
T ss_dssp             EECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEE-EE-----------EECCSCBCEEEEEEEETT-EEEEEET
T ss_pred             eccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEE-EE-----------EeecccccEEEEEEEccC-cEEEEcC
Confidence            1111233333333467888887666666543  2222211 11           112234567788876554 6777999


Q ss_pred             CCeEEEEEcCC
Q psy10662        151 NNSLYIYYKGL  161 (221)
Q Consensus       151 d~~i~~~d~~~  161 (221)
                      +|.+.+.....
T Consensus       989 ~gNl~vl~~~~  999 (1158)
T 3ei3_A          989 AFNLFVCQKDS  999 (1158)
T ss_dssp             TSEEEEEEECT
T ss_pred             CCcEEEEecCC
Confidence            99999987654

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.33  E-value=0.17  Score=36.21  Aligned_cols=143  Identities=13%  Similarity=0.101  Sum_probs=65.6

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEecCCcEEEecC----CC-------cEEEEEcCCCccce--
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKEDIVSAST----DS-------QLKLWNINKPNCLR--   69 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~s~~~----d~-------~v~~wd~~~~~~~~--   69 (221)
                      .+++.|+.  .+..||..+..-....+.. ....-.+++...+..++.|+.    ++       .+.+||..+.+-..  
T Consensus        17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~   94 (318)
T 2woz_A           17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP   94 (318)
T ss_dssp             EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred             hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence            34555553  4788998733211111111 111123333334555667763    12       16778887654322  


Q ss_pred             eeeccccceeEEEEeCCCCEEEEecCC-------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         70 SFVGHINDKNFVGLATDGDYVACGSEN-------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        70 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                      .+...... .+++.. ++.+++.|+.+       ..+.+||+.+.+....-      ..+ ....+|     +++ ..++
T Consensus        95 ~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~------~~p-~~r~~~-----~~~-~~~~  159 (318)
T 2woz_A           95 PLPSARCL-FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK------NLP-IKVYGH-----NVI-SHNG  159 (318)
T ss_dssp             CBSSCBCS-CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC------CCS-SCEESC-----EEE-EETT
T ss_pred             CCCccccc-cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC------CCC-Cccccc-----EEE-EECC
Confidence            11111111 122222 55666666643       34778888776543221      000 000111     111 2466


Q ss_pred             CEEEEecCC------CeEEEEEcCCCC
Q psy10662        143 DYVACGSEN------NSLYIYYKGLSK  163 (221)
Q Consensus       143 ~~l~~~~~d------~~i~~~d~~~~~  163 (221)
                      ++++.|+.+      ..+.+||..+.+
T Consensus       160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~  186 (318)
T 2woz_A          160 MIYCLGGKTDDKKCTNRVFIYNPKKGD  186 (318)
T ss_dssp             EEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred             EEEEEcCCCCCCCccceEEEEcCCCCE
Confidence            777777642      357788877654

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=96.31  E-value=0.19  Score=36.65  Aligned_cols=120  Identities=11%  Similarity=-0.013  Sum_probs=64.6

Q ss_pred             EEEEeccCceEEEEEecCCcEEEecC-CCcEEEEEcCCCccc--eee----eccccceeEEEEeCC----CCEEEEe--c
Q psy10662         28 AVFKGHRKAVSYVKFLNKEDIVSAST-DSQLKLWNINKPNCL--RSF----VGHINDKNFVGLATD----GDYVACG--S   94 (221)
Q Consensus        28 ~~~~~~~~~i~~~~~~~~~~l~s~~~-d~~v~~wd~~~~~~~--~~~----~~~~~~v~~~~~~~~----~~~l~~~--~   94 (221)
                      ..+...-...+.|+|.|++.++.+.. .|.|++++...++..  ..+    .........++++|+    +.+.++-  .
T Consensus        25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~  104 (347)
T 3das_A           25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA  104 (347)
T ss_dssp             EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred             EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence            34444456688999999877777766 899999986554431  111    122446789999995    4333332  2


Q ss_pred             CCCeEEEEECCCCeeeEEEEeecccc-eeEeeEE-EeeCceEEEEEecCCCEEEEecC
Q psy10662         95 ENNSLYIYYKGLSKHMHAYRFDTVRS-MLESSFV-GHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        95 ~d~~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      .++.|.-|.+........   ..... .+...+. ........++|.|+|.+.++.+.
T Consensus       105 ~~~~v~R~~~~~~~~~~~---~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd  159 (347)
T 3das_A          105 SDNRIVRMLYDEKKPSGE---QLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE  159 (347)
T ss_dssp             SSEEEEEEEBCTTSCTTC---CBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred             CCCEEEEEEeCCCCcccc---cCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence            344555555443110000   00000 1111111 11223456999999987777553

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=96.23  E-value=0.22  Score=36.47  Aligned_cols=91  Identities=9%  Similarity=0.040  Sum_probs=51.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce-eeEEEE---eccCceEEEEEecC----CcEEEecC----C----CcEEEEEcCC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE-ALAVFK---GHRKAVSYVKFLNK----EDIVSAST----D----SQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~-~~~~~~---~~~~~i~~~~~~~~----~~l~s~~~----d----~~v~~wd~~~   64 (221)
                      |||++++ +..+|.|++++.  .++ .+..+.   ........|+++|+    +.|+.+..    +    ..|..|+...
T Consensus        38 pdG~l~V-~e~~g~I~~~d~--~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~  114 (354)
T 3a9g_A           38 GGGRYLV-TERPGRLVLISP--SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDG  114 (354)
T ss_dssp             ETTEEEE-EETTTEEEEECS--SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECS
T ss_pred             CCCeEEE-EeCCCEEEEEeC--CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECC
Confidence            4666444 456799988873  333 222211   12346889999985    56555433    2    5677777654


Q ss_pred             C-------ccc-eeeec-cccceeEEEEeCCCCEEEEec
Q psy10662         65 P-------NCL-RSFVG-HINDKNFVGLATDGDYVACGS   94 (221)
Q Consensus        65 ~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~   94 (221)
                      .       +.+ ..+.. .......++|.|+|.++++.+
T Consensus       115 ~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G  153 (354)
T 3a9g_A          115 STFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG  153 (354)
T ss_dssp             SSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred             CCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence            3       111 11211 112346799999998777654

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.08  E-value=0.0088  Score=46.23  Aligned_cols=87  Identities=7%  Similarity=-0.016  Sum_probs=53.3

Q ss_pred             ccceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662         75 INDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS  153 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  153 (221)
                      ......+.++|+|++++.++ .+.++.++|+++......-.............. -.......+|.++|+...+-.-|..
T Consensus       322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq  400 (638)
T 3sbq_A          322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ  400 (638)
T ss_dssp             SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred             CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence            34457889999999876555 578999999874221100000000011111111 2334567899999977777778999


Q ss_pred             EEEEEcCCC
Q psy10662        154 LYIYYKGLS  162 (221)
Q Consensus       154 i~~~d~~~~  162 (221)
                      |.-|++...
T Consensus       401 vvkWni~~a  409 (638)
T 3sbq_A          401 VVKWNMEEA  409 (638)
T ss_dssp             EEEEEHHHH
T ss_pred             EEEEeccHH
Confidence            999998643

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.05  E-value=0.33  Score=36.91  Aligned_cols=53  Identities=8%  Similarity=-0.100  Sum_probs=35.0

Q ss_pred             cCceEEEEEecCCcEEEecCCC-cEEEEEcCCCccc--eeeec------cccceeEEEEeCC
Q psy10662         34 RKAVSYVKFLNKEDIVSASTDS-QLKLWNINKPNCL--RSFVG------HINDKNFVGLATD   86 (221)
Q Consensus        34 ~~~i~~~~~~~~~~l~s~~~d~-~v~~wd~~~~~~~--~~~~~------~~~~v~~~~~~~~   86 (221)
                      -...+.|+|.|++.|+.+...+ .|++++..+++..  ..+..      ....+..++|+|+
T Consensus        26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd   87 (454)
T 1cru_A           26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (454)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence            4467899999988877777765 6888876544322  12211      2345678999995

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.02  E-value=0.46  Score=38.28  Aligned_cols=200  Identities=7%  Similarity=0.041  Sum_probs=96.0

Q ss_pred             CCceEEEEeCC----CeEEEEEecCCceeeEEEE-e-------ccCceEEEEEe--cCCcEEEecCC------CcEEEEE
Q psy10662          2 NSCHLAFGSAD----HCVHYYDLRNTKEALAVFK-G-------HRKAVSYVKFL--NKEDIVSASTD------SQLKLWN   61 (221)
Q Consensus         2 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~-~-------~~~~i~~~~~~--~~~~l~s~~~d------~~v~~wd   61 (221)
                      ++.+++.|+.+    ..+.+||..+ .+ -..+. .       ....-.+++..  .+..++.|+.+      ..+.+||
T Consensus       397 ~~~iyv~GG~~~~~~~~v~~yd~~~-~~-W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd  474 (695)
T 2zwa_A          397 GNDVFYMGGSNPYRVNEILQLSIHY-DK-IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD  474 (695)
T ss_dssp             SSCEEEECCBSSSBCCCEEEEEECS-SC-EEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred             CCEEEEECCCCCCCcCcEEEEECCC-Ce-EEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence            45566777643    4678888873 32 11121 0       01111233333  44456666643      3578888


Q ss_pred             cCCCccce--eeeccccceeEEEEeCCCCEEEEecCCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662         62 INKPNCLR--SFVGHINDKNFVGLATDGDYVACGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG  137 (221)
Q Consensus        62 ~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  137 (221)
                      ..+.+-..  .+.. ...-.+++...++.+++.|+.++  .+.+||..+.+....-   . .+.    .........++.
T Consensus       475 ~~t~~W~~~~~~p~-~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~---~-~g~----~p~~r~~~~a~v  545 (695)
T 2zwa_A          475 MKTREWSMIKSLSH-TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT---P-KDE----FFQNSLVSAGLE  545 (695)
T ss_dssp             TTTTEEEECCCCSB-CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC---C-SSG----GGGSCCBSCEEE
T ss_pred             CCCCcEEECCCCCC-CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc---C-CCC----CCCcccceeEEE
Confidence            87753322  1211 11112233324777888887654  6889998876543210   0 000    000111122344


Q ss_pred             EecC-CCEEEEecC--C-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC--
Q psy10662        138 LATD-GDYVACGSE--N-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS--  207 (221)
Q Consensus       138 ~~~~-~~~l~~~~~--d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--  207 (221)
                      +..+ +++++.|+.  +     ..+..||+.+......+.+......  +.....+|     +++...++++++.|+.  
T Consensus       546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~-----~~~~~~~~~iyv~GG~~~  618 (695)
T 2zwa_A          546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGS-----QIKYITPRKLLIVGGTSP  618 (695)
T ss_dssp             EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSC-----EEEEEETTEEEEECCBCS
T ss_pred             EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccc-----eEEEeCCCEEEEECCccC
Confidence            5554 667777775  2     4588888877662011111111110  00111112     2223333777777774  


Q ss_pred             ------CCeEEEEECCcc
Q psy10662        208 ------QGIIKIYVIPIR  219 (221)
Q Consensus       208 ------dg~i~iw~~~~~  219 (221)
                            ...+.+||+.+.
T Consensus       619 ~~~~~~~~~v~~yd~~t~  636 (695)
T 2zwa_A          619 SGLFDRTNSIISLDPLSE  636 (695)
T ss_dssp             SCCCCTTTSEEEEETTTT
T ss_pred             CCCCCCCCeEEEEECCCC
Confidence                  345888988765

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.00  E-value=0.26  Score=35.21  Aligned_cols=183  Identities=14%  Similarity=0.062  Sum_probs=84.7

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEec-cCceEEEEEecCCcEEEecC----C-------CcEEEEEcCCCccce--e
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGH-RKAVSYVKFLNKEDIVSAST----D-------SQLKLWNINKPNCLR--S   70 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~l~s~~~----d-------~~v~~wd~~~~~~~~--~   70 (221)
                      +++.|+  ..+.+||..+..-....+... ...-.+++...+..++.|+.    +       ..+.+||..+.+-..  .
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~   84 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP   84 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred             EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence            455565  578999987332111111111 11122333334555666663    1       127788887654321  1


Q ss_pred             eeccccceeEEEEeCCCCEEEEecCC--------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662         71 FVGHINDKNFVGLATDGDYVACGSEN--------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG  142 (221)
Q Consensus        71 ~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  142 (221)
                      +...... .+++.. ++..++.|+.+        ..+.+||..+.+....      ..     +......- +++ .-++
T Consensus        85 ~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~------~~-----~p~~r~~~-~~~-~~~~  149 (315)
T 4asc_A           85 LPSPRCL-FGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES------DP-----LPYVVYGH-TVL-SHMD  149 (315)
T ss_dssp             BSSCEES-CEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC------CC-----CSSCCBSC-EEE-EETT
T ss_pred             CCcchhc-eeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC------CC-----CCCcccce-eEE-EECC
Confidence            1111111 122222 55666666632        3588888887654221      00     11111111 111 2456


Q ss_pred             CEEEEecC-C-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC-----eE
Q psy10662        143 DYVACGSE-N-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG-----II  211 (221)
Q Consensus       143 ~~l~~~~~-d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i  211 (221)
                      ++++.|+. +     ..+.+||..+.+-..      .....   .....|    ..+.+  ++++++.|+.++     .+
T Consensus       150 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~------~~~~p---~~r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~  214 (315)
T 4asc_A          150 LVYVIGGKGSDRKCLNKMCVYDPKKFEWKE------LAPMQ---TARSLF----GATVH--DGRIIVAAGVTDTGLTSSA  214 (315)
T ss_dssp             EEEEECCBCTTSCBCCCEEEEETTTTEEEE------CCCCS---SCCBSC----EEEEE--TTEEEEEEEECSSSEEEEE
T ss_pred             EEEEEeCCCCCCcccceEEEEeCCCCeEEE------CCCCC---Cchhce----EEEEE--CCEEEEEeccCCCCccceE
Confidence            67777776 2     357778776553211      11110   011111    12222  667777776543     57


Q ss_pred             EEEECCcc
Q psy10662        212 KIYVIPIR  219 (221)
Q Consensus       212 ~iw~~~~~  219 (221)
                      .+||+.+.
T Consensus       215 ~~yd~~~~  222 (315)
T 4asc_A          215 EVYSITDN  222 (315)
T ss_dssp             EEEETTTT
T ss_pred             EEEECCCC
Confidence            88888764

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=95.74  E-value=0.62  Score=39.07  Aligned_cols=39  Identities=5%  Similarity=-0.080  Sum_probs=33.7

Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  115 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  115 (221)
                      .+.+++..++..++++-+.|+++++|++.+++++.+...
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL  275 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL  275 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence            456777788888999999999999999999999988643

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=95.53  E-value=0.081  Score=38.47  Aligned_cols=123  Identities=10%  Similarity=0.035  Sum_probs=69.6

Q ss_pred             CCcEEEecCCCcEEEEEcCCCccceeeecc-ccceeEEEEe--C-CCCEEEEe-cCCCeEEEEECCCCeeeEEEEeeccc
Q psy10662         45 KEDIVSASTDSQLKLWNINKPNCLRSFVGH-INDKNFVGLA--T-DGDYVACG-SENNSLYIYYKGLSKHMHAYRFDTVR  119 (221)
Q Consensus        45 ~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~  119 (221)
                      ++.++.++.||.|.-.|..+|+..-.+... ..++....-.  + ++..++.. +.||.|..++..++.....+  ....
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~--~~~~   87 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL--SIRQ   87 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE--EHHH
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee--cccc
Confidence            456889999999999999999888777543 1222221100  1 22334443 68999999999887554332  1110


Q ss_pred             ceeEeeEEEeeCceE-EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee
Q psy10662        120 SMLESSFVGHINDKN-FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       120 ~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~  169 (221)
                      ......+.....++. ...-...+..+++|+.+|.+...|+.+++.+..+.
T Consensus        88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~  138 (339)
T 2be1_A           88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG  138 (339)
T ss_dssp             HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred             ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence            000000111111110 00000134578889999999999999888776664

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=95.51  E-value=0.57  Score=35.61  Aligned_cols=119  Identities=7%  Similarity=0.003  Sum_probs=59.8

Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC---CCEEEEecC---
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD---GDYVACGSE---  150 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~---  150 (221)
                      ....++|.|+|+++++-...+.|.+++...++......+..  ..   ........+..++|+|+   +..|.+...   
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~--~~---~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~  102 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPE--IV---NDADGQNGLLGFAFHPDFKNNPYIYISGTFKN  102 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTT--CC---CCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCc--cc---cccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence            45799999999977776555578888765443321110000  00   00012345678999995   444443332   


Q ss_pred             ----------CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        151 ----------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       151 ----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                                ...|.-|+.......  +  ......+..+.....|  ....++|.|||.+.++.+
T Consensus       103 ~~~~~~~~~~~~~v~r~~~~~~~~~--~--~~~~~i~~~~p~~~~H--~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          103 PKSTDKELPNQTIIRRYTYNKSTDT--L--EKPVDLLAGLPSSKDH--QSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             TTC--CCSCEEEEEEEEEEETTTTE--E--EEEEEEEEEECCCSSC--CEEEEEECTTSCEEEEEC
T ss_pred             cCCCccccccccEEEEEEECCCCCC--c--CCcEEEEEcCCCCCCC--CCCeEeECCCCeEEEEEC
Confidence                      124555554322110  0  0000111111111224  357899999998777754

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=95.48  E-value=0.57  Score=35.44  Aligned_cols=159  Identities=11%  Similarity=0.151  Sum_probs=89.8

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEEEEEecCC-cEE-Eec------CCCcEEEEEcCCCccceeee
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSYVKFLNKE-DIV-SAS------TDSQLKLWNINKPNCLRSFV   72 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~-~l~-s~~------~d~~v~~wd~~~~~~~~~~~   72 (221)
                      .|+-- .+..|+-|+++....+.+.+..|..    .|..-..+++. .++ +|-      ..|.+.+|..+.. .-+.+.
T Consensus       118 ~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie  195 (494)
T 1bpo_A          118 TVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE  195 (494)
T ss_dssp             EEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEEC
T ss_pred             eEEEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchhe
Confidence            34444 3558999999755677788876643    34444444433 333 321      2477889987654 334556


Q ss_pred             ccccceeEEEEeCCC---CEEEEecC---CCeEEEEECCCCe-eeEEEEeecccceeEeeEE---EeeCceEEEEEecCC
Q psy10662         73 GHINDKNFVGLATDG---DYVACGSE---NNSLYIYYKGLSK-HMHAYRFDTVRSMLESSFV---GHINDKNFVGLATDG  142 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~---~~l~~~~~---d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~  142 (221)
                      +|...-..+.+..+.   .+++-+..   .+.++|-++.... ....+     ..+...-+.   ....-.-++..++.-
T Consensus       196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f-----~kk~vdv~fppe~~~DFPvamqvs~ky  270 (494)
T 1bpo_A          196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF-----PKKAVDVFFPPEAQNDFPVAMQISEKH  270 (494)
T ss_dssp             CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC-----CCEEEECCCCTTSTTCCEEEEEEETTT
T ss_pred             eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc-----cceeeeeeCCcccccCceeEEEecccC
Confidence            665433333322111   12332322   3688888885430 00000     000011011   123345578888888


Q ss_pred             CEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        143 DYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      ..+..-+.-|.+++||+.++.+++.-+.
T Consensus       271 gviyviTK~G~i~lyDleTgt~i~~nrI  298 (494)
T 1bpo_A          271 DVVFLITKYGYIHLYDLETGTCIYMNRI  298 (494)
T ss_dssp             TEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CEEEEEecCceEEEEecccceeeeeecc
Confidence            8999999999999999999998876654

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=95.25  E-value=0.97  Score=36.70  Aligned_cols=182  Identities=14%  Similarity=0.114  Sum_probs=97.2

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeee-----cccccee
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV-----GHINDKN   79 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~-----~~~~~v~   79 (221)
                      .|-.|..+| +..||.. +.+...........|.++.. .++.|..++.+ -+..+|..+.+.. .+.     .....|.
T Consensus        75 ~lWigT~~G-l~~yd~~-~~~f~~~~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~  149 (758)
T 3ott_A           75 YLYMGTDNG-ILVYNYR-ADRYEQPETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIY  149 (758)
T ss_dssp             EEEEEETTE-EEEEETT-TTEECCCSCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEE
T ss_pred             cEEEEeCCC-eEEEeCC-CCEEECcccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEE
Confidence            344555554 6678876 33221100111234666654 45667777666 5788887665432 221     1124577


Q ss_pred             EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662         80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      ++...+++.+.+ ++.+| +..+|..+.+... +....  .     .......|.++...+++..|..|+. +-+..+|.
T Consensus       150 ~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~-~~~~~--~-----~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~  218 (758)
T 3ott_A          150 SIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEG-IPLPV--H-----SSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFP  218 (758)
T ss_dssp             EEEECTTCCEEE-EETTE-EEEEETTTTEEEE-ECCCC--C-----TTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEET
T ss_pred             EEEEcCCCCEEE-EeCCC-HhhCccCCCceEE-ecCCC--c-----cccccceeEEEEEECCCCEEEEEEC-CCCeEEcC
Confidence            887777777555 44444 7778876654321 10000  0     0001224777877777765555654 45778887


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .+.+......               -....|.++...++|.+.+.. .+| +.+++..++
T Consensus       219 ~~~~~~~~~~---------------l~~~~i~~i~~d~~g~lWigT-~~G-l~~~~~~~~  261 (758)
T 3ott_A          219 STGQIKQTEA---------------FHNNSIKSLALDGNGDLLAGT-DNG-LYVYHNDTT  261 (758)
T ss_dssp             TTTEEEEEEE---------------EEEEEEEEEEECTTCCEEEEE-TTE-EEEECCTTS
T ss_pred             CCCeEEeccC---------------CCCCeEEEEEEcCCCCEEEEe-CCc-eeEEecCCC
Confidence            6543221100               012357888888887766554 444 667776543

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=95.15  E-value=1.2  Score=37.32  Aligned_cols=39  Identities=5%  Similarity=-0.080  Sum_probs=33.7

Q ss_pred             ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      .+.+++..++..++++-+.|+++++|++.+++++...++
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL  275 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL  275 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence            456677778888999999999999999999999887764

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=94.89  E-value=0.76  Score=33.57  Aligned_cols=120  Identities=8%  Similarity=-0.039  Sum_probs=62.4

Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC----CCEEEEe--c
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD----GDYVACG--S  149 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~--~  149 (221)
                      ...+.++|.|+|.++++--..|.|++++...++........       ............++++|+    +.+.++-  .
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~-------~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~  104 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVP-------GVSPSGEGGLLGIALSPDYASDHMVYAYFTSA  104 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECT-------TCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccC-------ceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence            45689999999997777766899999876554431110000       001122445788999985    4333321  2


Q ss_pred             CCCeEEEEEcCCCCce-eeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        150 ENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       150 ~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      .++.|.-|.+...... ..+  ......+..+.....|.  -..+.|.|||.+.++.+
T Consensus       105 ~~~~v~R~~~~~~~~~~~~~--~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~G  158 (347)
T 3das_A          105 SDNRIVRMLYDEKKPSGEQL--GAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTG  158 (347)
T ss_dssp             SSEEEEEEEBCTTSCTTCCB--CCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECB
T ss_pred             CCCEEEEEEeCCCCcccccC--CCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEEC
Confidence            3445555555432100 000  00000111111112343  46799999998777754

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=94.38  E-value=2.1  Score=37.66  Aligned_cols=155  Identities=10%  Similarity=0.103  Sum_probs=81.6

Q ss_pred             CCeEEEEEecCCceeeEEEEecc----CceEEEEEecC-CcEE-Ee------cCCCcEEEEEcCCCccceeeecccccee
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHR----KAVSYVKFLNK-EDIV-SA------STDSQLKLWNINKPNCLRSFVGHINDKN   79 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~----~~i~~~~~~~~-~~l~-s~------~~d~~v~~wd~~~~~~~~~~~~~~~~v~   79 (221)
                      +..|+-|++.....+.+.+..|.    ..|..-..+++ +.++ +|      ...|.+.+|.++.+. -+.+.+|...-.
T Consensus       124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~  202 (1630)
T 1xi4_A          124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFA  202 (1630)
T ss_pred             CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhh
Confidence            45799999975455666665552    34444444443 3333 32      245788899886542 233455543322


Q ss_pred             EEEEe--CC-CCEEEEec---CCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         80 FVGLA--TD-GDYVACGS---ENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        80 ~~~~~--~~-~~~l~~~~---~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      .+...  +. ...++.+.   ..+.++|-++... .....+  ..........-.....-..++..++.-..+..-+.-|
T Consensus       203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f--~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G  280 (1630)
T 1xi4_A          203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF--PKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG  280 (1630)
T ss_pred             eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC--ccccccccCCcccccCcceEEEeccccCEEEEEecCc
Confidence            22221  11 11222111   1267888887543 110010  0000000000011233445677788878888899999


Q ss_pred             eEEEEEcCCCCceeeee
Q psy10662        153 SLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~  169 (221)
                      .+.+||+.++..++.-+
T Consensus       281 ~~~~~d~~t~~~i~~~r  297 (1630)
T 1xi4_A          281 YIHLYDLETGTCIYMNR  297 (1630)
T ss_pred             eEEEEecccchhhhhcc
Confidence            99999999998876554

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=94.12  E-value=1.2  Score=32.54  Aligned_cols=92  Identities=7%  Similarity=-0.053  Sum_probs=49.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceee---EEE----EeccCceEEEEEec----CCcEEEecC--------CCcEEEEE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEAL---AVF----KGHRKAVSYVKFLN----KEDIVSAST--------DSQLKLWN   61 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~---~~~----~~~~~~i~~~~~~~----~~~l~s~~~--------d~~v~~wd   61 (221)
                      |||+.|.++...|.|++++..  +...   ..+    .........|+++|    ++.|..+..        ...|..|+
T Consensus        27 pdG~~l~V~e~~G~i~~~~~~--g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~  104 (353)
T 2g8s_A           27 PDNHGMLITLRGGELRHWQAG--KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGR  104 (353)
T ss_dssp             STTCCEEEEETTTEEEEEETT--TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CCCCEEEEEeCCceEEEEeCC--CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEE
Confidence            577734455678999988753  3221   111    11234578999997    455554422        23566666


Q ss_pred             cCCCc----ccee-eec------cccceeEEEEeCCCCEEEEec
Q psy10662         62 INKPN----CLRS-FVG------HINDKNFVGLATDGDYVACGS   94 (221)
Q Consensus        62 ~~~~~----~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~   94 (221)
                      +....    .... +..      .......+.|.|+|.++++.+
T Consensus       105 ~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  148 (353)
T 2g8s_A          105 LSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG  148 (353)
T ss_dssp             ECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred             ECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence            64321    1111 111      111246799999997666643

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=93.13  E-value=2.2  Score=32.53  Aligned_cols=116  Identities=6%  Similarity=-0.051  Sum_probs=60.7

Q ss_pred             cCceEEEEEecCC--cEEEecCCCcEEEEEcCCC---ccceeee-----c----cccceeEEEEeCC----CCEEEEecC
Q psy10662         34 RKAVSYVKFLNKE--DIVSASTDSQLKLWNINKP---NCLRSFV-----G----HINDKNFVGLATD----GDYVACGSE   95 (221)
Q Consensus        34 ~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~---~~~~~~~-----~----~~~~v~~~~~~~~----~~~l~~~~~   95 (221)
                      -...+.|+|.|++  .++.+...|.|++++....   ..+..+.     +    .......++|+|+    +.+.++-+.
T Consensus        13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~   92 (463)
T 2wg3_C           13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT   92 (463)
T ss_dssp             ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred             CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence            3457899999876  4888888999999975322   1222111     0    1346788999996    443333221


Q ss_pred             --C----------CeEEEEECCCCeeeEEEEeecccceeEeeEE--EeeCceEEEEEecCCCEEEEecCCC
Q psy10662         96 --N----------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFV--GHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        96 --d----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                        +          ..|.-|.+.....- .  .+....+.+..+.  ........++|.|||.+.++.++.+
T Consensus        93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~-~--~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~  160 (463)
T 2wg3_C           93 NQERWAIGPHDHILRVVEYTVSRKNPH-Q--VDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM  160 (463)
T ss_dssp             CCCSSCSSSSCEEEEEEEEEBCTTCTT-S--BCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred             CCCCcccCCcccceEEEEEEEcCCCCC-c--cCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence              1          13333444321000 0  0011111222221  1123467899999998777666543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=93.04  E-value=1.6  Score=33.28  Aligned_cols=29  Identities=10%  Similarity=-0.090  Sum_probs=22.1

Q ss_pred             ceeEEEEeCCCC-EEEEecCCCeEEEEECC
Q psy10662         77 DKNFVGLATDGD-YVACGSENNSLYIYYKG  105 (221)
Q Consensus        77 ~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~  105 (221)
                      ..+.|+|.|++. .++++...|.|++++..
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~   44 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPE   44 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence            457899999996 45556678999999753

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=92.01  E-value=2.4  Score=30.23  Aligned_cols=86  Identities=16%  Similarity=0.124  Sum_probs=43.9

Q ss_pred             CcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEee
Q psy10662         55 SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHI  130 (221)
Q Consensus        55 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (221)
                      ..|+..++...+... +..  ..  ...|+++++.|+-..    .+..|..-++..... ..             +..+.
T Consensus        88 ~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~-------------lt~~~  148 (302)
T 3s25_A           88 NSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KK-------------IKNHY  148 (302)
T ss_dssp             EEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EE-------------EESSC
T ss_pred             CeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EE-------------EeCCC
Confidence            457777776654322 221  11  236777888776554    233454445543221 11             11111


Q ss_pred             CceEEEEEecCCCEEEEecC-CCeEEEEEcCCCC
Q psy10662        131 NDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSK  163 (221)
Q Consensus       131 ~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~  163 (221)
                        +  .+++|+++.|+-.+. ...|...++..+.
T Consensus       149 --~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~  178 (302)
T 3s25_A          149 --L--FTCNTSDRYFYYNNPKNGQLYRYDTASQS  178 (302)
T ss_dssp             --C--CCSEEETTEEEEECTTTCCEEEEETTTTE
T ss_pred             --c--eEeeEECCEEEEEeCCCceEEEEECCCCC
Confidence              1  346777777765444 5667777765443

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=91.02  E-value=5.3  Score=32.25  Aligned_cols=155  Identities=7%  Similarity=0.029  Sum_probs=77.4

Q ss_pred             cCCcEEEecCC----CcEEEEEcCCCccceee-e------ccccceeEEEEeC-CCCEEEEecCC------CeEEEEECC
Q psy10662         44 NKEDIVSASTD----SQLKLWNINKPNCLRSF-V------GHINDKNFVGLAT-DGDYVACGSEN------NSLYIYYKG  105 (221)
Q Consensus        44 ~~~~l~s~~~d----~~v~~wd~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------~~v~iwd~~  105 (221)
                      .+..++.|+.+    ..+.+||..+.+....- .      .....-.+++..+ ++..++.|+.+      ..+.+||..
T Consensus       397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~  476 (695)
T 2zwa_A          397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK  476 (695)
T ss_dssp             SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred             CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence            34456666643    45788888776433221 1      1111123333333 67777777653      347788887


Q ss_pred             CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC--eEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662        106 LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNE  183 (221)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
                      +.+....      .     .+...... .+++...++++++.|+.++  .+.+||..+..-...      ..........
T Consensus       477 t~~W~~~------~-----~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~------~~~g~~p~~r  538 (695)
T 2zwa_A          477 TREWSMI------K-----SLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV------TPKDEFFQNS  538 (695)
T ss_dssp             TTEEEEC------C-----CCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC------CCSSGGGGSC
T ss_pred             CCcEEEC------C-----CCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc------cCCCCCCCcc
Confidence            7644221      0     01111111 1222324788888888654  688888776542111      1000000011


Q ss_pred             cccccceeEEEEcCC-CcEEEEecC--C-----CeEEEEECCccc
Q psy10662        184 DDTNEFVSAVCWRQL-SRVLVAANS--Q-----GIIKIYVIPIRV  220 (221)
Q Consensus       184 ~~~~~~v~~~~~~~~-~~~l~~~~~--d-----g~i~iw~~~~~~  220 (221)
                      ..|    .++.+..+ +++++.|+.  +     ..+..||+.+.+
T Consensus       539 ~~~----~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~  579 (695)
T 2zwa_A          539 LVS----AGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN  579 (695)
T ss_dssp             CBS----CEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred             cce----eEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence            122    33555555 667777765  2     458888887653

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=90.91  E-value=3.7  Score=33.20  Aligned_cols=36  Identities=14%  Similarity=0.117  Sum_probs=29.9

Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  115 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  115 (221)
                      |.++.+  +..++++-+.|.++++|++.+++++.+...
T Consensus       224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL  259 (729)
T 3f7f_A          224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM  259 (729)
T ss_dssp             EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred             EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence            444444  467999999999999999999999988865

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=90.70  E-value=1.4  Score=34.60  Aligned_cols=90  Identities=8%  Similarity=-0.089  Sum_probs=56.3

Q ss_pred             EEEEEecC----CceeeEEEEeccCceEEEEEecCCc--EEEecCCCcEEEEEcCCCcc-------------ceeeeccc
Q psy10662         15 VHYYDLRN----TKEALAVFKGHRKAVSYVKFLNKED--IVSASTDSQLKLWNINKPNC-------------LRSFVGHI   75 (221)
Q Consensus        15 i~i~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~--l~s~~~d~~v~~wd~~~~~~-------------~~~~~~~~   75 (221)
                      |.+.|.+.    .......+. -......+..+|++.  ++++-.+.++.++|++....             ..... ..
T Consensus       300 v~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G  377 (638)
T 3sbq_A          300 TPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG  377 (638)
T ss_dssp             CCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred             eeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence            56666652    112233333 344556778888665  44556689999999974211             11111 12


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCC
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGL  106 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~  106 (221)
                      -.....+|.++|.-..+.--|..|.-|++..
T Consensus       378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~  408 (638)
T 3sbq_A          378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE  408 (638)
T ss_dssp             SCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred             CcccEEEECCCCceEeeeeecceEEEEeccH
Confidence            2457889999996566677899999999854

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=90.47  E-value=1.5  Score=37.56  Aligned_cols=39  Identities=5%  Similarity=-0.080  Sum_probs=32.8

Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  115 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  115 (221)
                      .+.+++..++..++++-+.|+++++|++.+++++.+...
T Consensus       239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL  277 (1139)
T 4fhn_B          239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL  277 (1139)
T ss_dssp             CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred             eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence            345566677888999999999999999999999988753

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=90.43  E-value=2  Score=34.73  Aligned_cols=30  Identities=17%  Similarity=0.229  Sum_probs=24.4

Q ss_pred             ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .|.++.+  +..+|++-+.|.++|+|++.+++
T Consensus       223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~  252 (729)
T 3f7f_A          223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFT  252 (729)
T ss_dssp             EEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred             eEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence            3554444  57899999999999999999876

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=90.03  E-value=8.7  Score=33.11  Aligned_cols=32  Identities=13%  Similarity=0.101  Sum_probs=27.4

Q ss_pred             ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .+.+++..++..++++-+.|+++|+|++.+++
T Consensus       239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~  270 (1139)
T 4fhn_B          239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ  270 (1139)
T ss_dssp             CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred             eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence            45566677888999999999999999999875

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=90.03  E-value=6.7  Score=31.85  Aligned_cols=175  Identities=18%  Similarity=0.190  Sum_probs=92.8

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee-ec----cc
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF-VG----HI   75 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~----~~   75 (221)
                      |-.|..+ -|..||.. +++ ...+..     ....|.++...+++.|..++.+| +..++..+.+..... ..    ..
T Consensus       115 lWigt~~-Gl~~~~~~-~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~  190 (758)
T 3ott_A          115 LWLGALN-GLYTYQLQ-SRK-LTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSN  190 (758)
T ss_dssp             EEEEETT-EEEEEETT-TCC-EEEECHHHHCCSCSCEEEEEECTTCCEEEEETTE-EEEEETTTTEEEEECCCCCTTCSS
T ss_pred             EEEEcCC-cceeEeCC-CCe-EEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCC-HhhCccCCCceEEecCCCcccccc
Confidence            3344444 46667765 332 222311     12457787777677777776654 777887665432111 11    11


Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      ..|.++...+++..|..|+. +-+..+|..+++.....             ......|.++...++|.+.+ |+.+ -+.
T Consensus       191 ~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~-------------~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~  254 (758)
T 3ott_A          191 LFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTE-------------AFHNNSIKSLALDGNGDLLA-GTDN-GLY  254 (758)
T ss_dssp             CCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEE-------------EEEEEEEEEEEECTTCCEEE-EETT-EEE
T ss_pred             ceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEecc-------------CCCCCeEEEEEEcCCCCEEE-EeCC-cee
Confidence            24778877777765555554 34778887765432110             11234577888787877555 4444 577


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG  209 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  209 (221)
                      +++..+.... .+....  ..   ...  -....|.++....+|.+-+. +..|
T Consensus       255 ~~~~~~~~~~-~~~~~~--~~---~~~--l~~~~i~~i~~D~~g~lWiG-T~~G  299 (758)
T 3ott_A          255 VYHNDTTPLQ-HIIHDS--RN---IQS--LTNNIIWNIFADQEHNIWLG-TDYG  299 (758)
T ss_dssp             EECCTTSCCE-EECCCT--TC---TTS--CSCSCEEEEEECTTCCEEEE-ESSS
T ss_pred             EEecCCCcEE-EEEcCC--CC---cCc--CCcCeEEEEEEcCCCCEEEE-eCCc
Confidence            8886654332 111000  00   000  12345888888877765443 3445

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=89.95  E-value=3.8  Score=28.85  Aligned_cols=88  Identities=7%  Similarity=-0.025  Sum_probs=48.2

Q ss_pred             CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEE
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVA   91 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~   91 (221)
                      ||.|+.|-....+++- .-......|..++......++. . ||.|..|-......+..-..-...|..++...+  +.+
T Consensus        41 ~G~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~  115 (282)
T 3qhy_B           41 GGKVLGWGANLNGQLT-MPAATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASY  115 (282)
T ss_dssp             TTEEEEEECCSSSTTS-CCGGGGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEE
T ss_pred             CCEEEEEeCCCCCCCC-CCccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEE
Confidence            8999999866333221 1111233566766554444555 4 899999976542222111111235666666543  333


Q ss_pred             EecCCCeEEEEECC
Q psy10662         92 CGSENNSLYIYYKG  105 (221)
Q Consensus        92 ~~~~d~~v~iwd~~  105 (221)
                      .-. +|.|..|-..
T Consensus       116 al~-~G~v~~wG~n  128 (282)
T 3qhy_B          116 ALK-DGKVIAWGDD  128 (282)
T ss_dssp             EEE-TTEEEEEECC
T ss_pred             EEe-CCeEEEecCC
Confidence            344 8899999654

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=89.95  E-value=3.8  Score=28.85  Aligned_cols=129  Identities=8%  Similarity=-0.050  Sum_probs=64.6

Q ss_pred             CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEE
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVA   91 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~   91 (221)
                      ||.|+.|-....+++- .-..-...|..++......++. . ||.|+.|-......+.........|..++...+  +.+
T Consensus        80 ~G~v~~wG~n~~Gqlg-~P~~~~~~v~~ia~G~~hs~al-~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~  154 (282)
T 3qhy_B           80 DGEVIAWGGNEDGQTT-VPAEARSGVDAIAAGAWASYAL-K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TAL  154 (282)
T ss_dssp             TTEEEEEECCTTSTTC-CCGGGSSSEEEEEEETTEEEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEE
T ss_pred             CCEEEEeeCCCCCCCC-CCcccCCCeEEEECcCCEEEEE-e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEE
Confidence            8888888765333211 1011134677776554443444 4 999999976543222111122345666655433  322


Q ss_pred             EecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC
Q psy10662         92 CGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS  162 (221)
Q Consensus        92 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~  162 (221)
                      .-. ||.|..|-......+..       .      ......|..++..... .++.  .||.++.|-....
T Consensus       155 ~l~-~G~v~~wG~n~~gqlg~-------p------~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~  208 (282)
T 3qhy_B          155 AVK-NGGVIAWGDNYFGQTTV-------P------AEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRY  208 (282)
T ss_dssp             EEE-TTEEEEEECCTTSTTSC-------C------GGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTT
T ss_pred             EEE-CCEEEEecCCCCCCCCC-------c------eecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCC
Confidence            233 78898886543211100       0      0012345555544332 2333  5899999965443

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=85.02  E-value=8.9  Score=27.71  Aligned_cols=102  Identities=9%  Similarity=0.031  Sum_probs=63.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCC------ceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcC--CCcc-----
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNT------KEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNIN--KPNC-----   67 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~------~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~--~~~~-----   67 (221)
                      +...++.++.+|.|+--.+..-      +.....+.. .+.+..+... ....++..+..|.+..+...  .-..     
T Consensus       108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a  186 (327)
T 3uc1_A          108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT  186 (327)
T ss_dssp             SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred             CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence            4678889999999998887520      111112332 3445554444 45668888899998888776  2111     


Q ss_pred             ----ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECC
Q psy10662         68 ----LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  105 (221)
Q Consensus        68 ----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~  105 (221)
                          ...+. ....|.++...+++.+++..+..|.++.-.+.
T Consensus       187 ~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~  227 (327)
T 3uc1_A          187 SGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE  227 (327)
T ss_dssp             BCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred             CCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence                11222 23446666555556688888899988887653

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=84.07  E-value=10  Score=30.00  Aligned_cols=60  Identities=8%  Similarity=0.057  Sum_probs=36.5

Q ss_pred             ceEEEEEecCCCEEEEecCC------------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC
Q psy10662        132 DKNFVGLATDGDYVACGSEN------------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       132 ~v~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  199 (221)
                      ..-.|+|+|.|+++++-..+            ..+.+.+..+++....+.              ......++.++|+||+
T Consensus       477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~--------------~P~gaE~TG~~fspDg  542 (592)
T 3zwu_A          477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV--------------GPIGCEVTGISFSPDQ  542 (592)
T ss_dssp             CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE--------------CCTTCEEEEEEECTTS
T ss_pred             CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe--------------CCCCccCcCeeECCCC
Confidence            34568999999966654332            123344433443322221              1235678999999999


Q ss_pred             cEEEEe
Q psy10662        200 RVLVAA  205 (221)
Q Consensus       200 ~~l~~~  205 (221)
                      +.|+..
T Consensus       543 ~tlfvn  548 (592)
T 3zwu_A          543 KTLFVG  548 (592)
T ss_dssp             SEEEEE
T ss_pred             CEEEEE
Confidence            988775

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=83.86  E-value=9.8  Score=27.25  Aligned_cols=201  Identities=9%  Similarity=0.071  Sum_probs=104.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc------eeeE--EEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCC-------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK------EALA--VFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINK-------   64 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~------~~~~--~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~-------   64 (221)
                      |+...+++.+.+|.|+--.+..-.      .-+.  .+. ..+.+..+... ....++..+..|.++-+....       
T Consensus         6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~   84 (312)
T 1suu_A            6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA   84 (312)
T ss_dssp             --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred             CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence            356778899999999988765210      0111  122 22344444443 456688888899887776532       


Q ss_pred             --Cccc---eeeeccccceeEEEEeC---CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEE
Q psy10662         65 --PNCL---RSFVGHINDKNFVGLAT---DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFV  136 (221)
Q Consensus        65 --~~~~---~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  136 (221)
                        |..+   ..+.. ...|..+...+   +..+++..+.+|.++-..+..-...+      ..+.....+.. ...+..+
T Consensus        85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r------~~G~~~i~L~~-~d~lv~~  156 (312)
T 1suu_A           85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK------SRGVIVIKLND-KDFVTSA  156 (312)
T ss_dssp             ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----------CEECBCCCT-TCCEEEE
T ss_pred             CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC------CCcEEEEecCC-CCEEEEE
Confidence              1111   11222 23344443332   45678888899999888764322111      01111112222 3445555


Q ss_pred             EEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        137 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       137 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      ........++..+.+|.+..+....-....     . ...-.....+.. ...|.++..-+++..|++.+..|..+...+
T Consensus       157 ~~~~~~~~i~l~T~~G~~~r~~~~ev~~~g-----R-~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~  229 (312)
T 1suu_A          157 EIVFKDEKVICLSKKGSAFIFNSRDVRLTN-----R-GTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNM  229 (312)
T ss_dssp             EEECTTCEEEEEETTSEEEEEEGGGSCBCC-----T-TBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred             EEeCCCCEEEEEeCCCcEEEEEHHHccccC-----C-CCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence            444445678888889998888764311100     0 000001111112 334555555455666778888888887776


Q ss_pred             C
Q psy10662        217 P  217 (221)
Q Consensus       217 ~  217 (221)
                      .
T Consensus       230 ~  230 (312)
T 1suu_A          230 S  230 (312)
T ss_dssp             G
T ss_pred             H
Confidence            4

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=83.24  E-value=12  Score=29.46  Aligned_cols=62  Identities=11%  Similarity=0.069  Sum_probs=36.9

Q ss_pred             CceEEEEEecCCCEEEEecC------------CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC
Q psy10662        131 NDKNFVGLATDGDYVACGSE------------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL  198 (221)
Q Consensus       131 ~~v~~~~~~~~~~~l~~~~~------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  198 (221)
                      .....+.|+++|.+.++...            ...+..++..+++....+.              ......++.++|+||
T Consensus       476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~--------------~P~~aEpnGiafSPD  541 (592)
T 4a9v_A          476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV--------------GPIGCEVTGISFSPD  541 (592)
T ss_dssp             CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE--------------CCTTCEEEEEEECTT
T ss_pred             CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe--------------CCCCccccCCEECCC
Confidence            34567899999987763221            1144444444444322221              012346899999999


Q ss_pred             CcEEEEec
Q psy10662        199 SRVLVAAN  206 (221)
Q Consensus       199 ~~~l~~~~  206 (221)
                      ++.|+++-
T Consensus       542 ~ktLfV~v  549 (592)
T 4a9v_A          542 QKTLFVGI  549 (592)
T ss_dssp             SSEEEEEE
T ss_pred             CCEEEEEE
Confidence            99888753

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=82.63  E-value=10  Score=26.59  Aligned_cols=149  Identities=5%  Similarity=-0.032  Sum_probs=80.3

Q ss_pred             CceEEEEeCCCeEEEEEecCC-----ceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCc---------c
Q psy10662          3 SCHLAFGSADHCVHYYDLRNT-----KEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPN---------C   67 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~-----~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~---------~   67 (221)
                      ...++..+.+|.++-..+..-     +.....+. ..+.+..+... ....++..+..|.+..+....-.         .
T Consensus        80 ~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~  158 (276)
T 3no0_A           80 GNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQ  158 (276)
T ss_dssp             CSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE
T ss_pred             CCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEE
Confidence            467888899999999887521     11112233 23455555444 35568888899998888764321         1


Q ss_pred             ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         68 LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                      ...+.. ...|..+...+++..++..+..|.++...+..-...      .+...-...+ .....+..+........++.
T Consensus       159 ~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~------~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~  230 (276)
T 3no0_A          159 GIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKT------NRGVKGTEVS-GTKDTLVDLIPIKEEVELLI  230 (276)
T ss_dssp             CCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCC------CTTCCCEECC-CSSSCEEEEEEESSEEEEEE
T ss_pred             EEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccC------CCCCcceEEE-cCCCcEEEEEEeCCCCEEEE
Confidence            112222 244555555555667888888888888765422111      0111111111 12233433333233345666


Q ss_pred             ecCCCeEEE--EEcC
Q psy10662        148 GSENNSLYI--YYKG  160 (221)
Q Consensus       148 ~~~d~~i~~--~d~~  160 (221)
                      .+.+|.+..  ++..
T Consensus       231 ~t~~G~~ir~~~~~~  245 (276)
T 3no0_A          231 TTKNGKAFYDKINQK  245 (276)
T ss_dssp             EETTSCEEEEEEEGG
T ss_pred             EcCCCeEEEeeeCHH
Confidence            677777766  6653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	221
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-13
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	6e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-08
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-12
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-09
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-09
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.003
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	8e-08
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	4e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	5e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	0.004
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	6e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	1e-04
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	9e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.001
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.001
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.002
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.004
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	9e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	8e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.004

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.0 bits (154), Expect = 9e-13
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 2/102 (1%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLW 60
               L  GS D  +  +D+  T   L    GH   V  V F +    I+S + D  L++W
Sbjct: 216 PGPFLLSGSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 274

Query: 61  NINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 102
           +     C+++   H +    +       YV  GS + ++ ++
Sbjct: 275 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.6 bits (140), Expect = 6e-11
 Identities = 35/221 (15%), Positives = 77/221 (34%), Gaps = 24/221 (10%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLW 60
           N  H+   S D  +  ++++ T   +  F GHR+ V  V+       I S S D  +++W
Sbjct: 112 NGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 170

Query: 61  NINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA-------Y 113
            +    C      H +    +  A +  Y +      S           + +        
Sbjct: 171 VVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 230

Query: 114 RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV 173
            +D    M   + VGH N    V   + G ++   +++ +L ++     + M        
Sbjct: 231 MWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE- 289

Query: 174 RSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIY 214
                          FV+++ + + +  +V  +    +K++
Sbjct: 290 --------------HFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (118), Expect = 5e-08
 Identities = 36/260 (13%), Positives = 77/260 (29%), Gaps = 66/260 (25%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL--------------------- 43
            +   S D  +  +D   T +     KGH  +V  + F                      
Sbjct: 31  VMVSASEDATIKVWDY-ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 89

Query: 44  ----------------------NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV 81
                                 N + IVSAS D  +K+W +    C+++F GH      V
Sbjct: 90  GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 149

Query: 82  GLATDGDYVACGSENNSLYIYYKG-------LSKHMHAYRFDTVRSMLESSFVGHINDKN 134
               DG  +A  S + ++ ++          L +H H     +       S +       
Sbjct: 150 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE 209

Query: 135 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVC 194
                  G ++  GS + ++ ++       +                     + +V  V 
Sbjct: 210 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---------------GHDNWVRGVL 254

Query: 195 WRQLSRVLVAANSQGIIKIY 214
           +    + +++      ++++
Sbjct: 255 FHSGGKFILSCADDKTLRVW 274

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (113), Expect = 2e-07
 Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 4/150 (2%)

Query: 29  VFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG 87
              GHR  V+ V F      +VSAS D+ +K+W+    +  R+  GH    + V   +  
Sbjct: 12  ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGH---TDSVQDISFD 68

Query: 88  DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC 147
                 +  ++         +     R         SS     N  + V  + D      
Sbjct: 69  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW 128

Query: 148 GSENNSLYIYYKGLSKHMHAYRFDTVRSML 177
             +       + G  + +   R +   +++
Sbjct: 129 EVQTGYCVKTFTGHREWVRMVRPNQDGTLI 158

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.1 bits (149), Expect = 5e-12
 Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 17/160 (10%)

Query: 1   MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKL 59
            ++     G+ D     +D+R        F GH   ++ + F  N     + S D+  +L
Sbjct: 194 PDTRLFVSGACDASAKLWDVR-EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL 252

Query: 60  WNINKPNCLRSFVGHINDKNFVGLA--TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDT 117
           +++     L ++           ++    G  +  G ++ +  ++             D 
Sbjct: 253 FDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW-------------DA 299

Query: 118 VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157
           +++       GH N  + +G+  DG  VA GS ++ L I+
Sbjct: 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.7 bits (130), Expect = 1e-09
 Identities = 26/166 (15%), Positives = 57/166 (34%), Gaps = 26/166 (15%)

Query: 49  VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK 108
           VS + D+  KLW++ +  C ++F GH +D N +    +G+  A GS++ +  ++     +
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259

Query: 109 HMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY 168
            +  Y  D             I     V  +  G  +  G ++ +  ++    +      
Sbjct: 260 ELMTYSHDN-----------IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL 308

Query: 169 RFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIY 214
                                VS +        +   +    +KI+
Sbjct: 309 AGHD---------------NRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.8 bits (112), Expect = 3e-07
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLW 60
           +   L  G  D   + +D     +   V  GH   VS +   +    + + S DS LK+W
Sbjct: 281 SGRLLLAGYDDFNCNVWDAL-KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339

Query: 61  N 61
           N
Sbjct: 340 N 340

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.8 bits (127), Expect = 2e-09
 Identities = 13/62 (20%), Positives = 29/62 (46%)

Query: 1   MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLW 60
           +    +A GS D  +  Y ++   + +     H+  V+ + +     +VS+  D+ +K W
Sbjct: 225 IEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRW 284

Query: 61  NI 62
           N+
Sbjct: 285 NV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.7 bits (80), Expect = 0.003
 Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 8/93 (8%)

Query: 23  TKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG 82
             E L    GH K ++ +       ++S S D ++  W+ +          H N    + 
Sbjct: 2   HDEVLKTISGHNKGITALTV---NPLISGSYDGRIMEWSSSS-----MHQDHSNLIVSLD 53

Query: 83  LATDGDYVACGSENNSLYIYYKGLSKHMHAYRF 115
            +   +Y +   ++                   
Sbjct: 54  NSKAQEYSSISWDDTLKVNGITKHEFGSQPKVA 86

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.8 bits (117), Expect = 8e-08
 Identities = 37/221 (16%), Positives = 76/221 (34%), Gaps = 17/221 (7%)

Query: 1   MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLW 60
            +   L  GS D  V  +DLR  + +L +          V   + + I + S D  +++W
Sbjct: 173 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW 232

Query: 61  NINKPNC-------LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY 113
           +               S  GH +    V    DG  V  GS + S+ ++    + +    
Sbjct: 233 DSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 292

Query: 114 RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV 173
           +     +    +++GH +    V    + +Y+  GS++  +  + K     +        
Sbjct: 293 KTPNSGTCE-VTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL------- 344

Query: 174 RSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIY 214
             ML+  RN   +    +         V    +     +I+
Sbjct: 345 --MLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.6 bits (114), Expect = 2e-07
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 8/70 (11%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-------IVSASTD 54
           N  ++  GS D  V ++D + +   L + +GHR +V  V   N            + S D
Sbjct: 319 NDEYILSGSKDRGVLFWDKK-SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD 377

Query: 55  SQLKLWNINK 64
            + ++W   K
Sbjct: 378 CKARIWKYKK 387

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (115), Expect = 1e-07
 Identities = 27/215 (12%), Positives = 74/215 (34%), Gaps = 26/215 (12%)

Query: 1   MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLW 60
            +   +  G+ D  V  +D       L   +GH   V  ++F +   +VS S D+ +++W
Sbjct: 145 YDGRRVVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVW 202

Query: 61  NINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS 120
           ++   NC+ +  GH       G+    + +  G+ ++++ I+     + +   +      
Sbjct: 203 DVETGNCIHTLTGH--QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGP---- 256

Query: 121 MLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERD 180
                   + +      L  + ++V   S++ ++ ++     + +               
Sbjct: 257 --------NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE-------- 300

Query: 181 RNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV 215
                +   V  +       V    +  G  +  +
Sbjct: 301 --SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 333

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 2e-07
 Identities = 26/101 (25%), Positives = 36/101 (35%)

Query: 21  RNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF 80
           R   ++  V KGH   V          IVS S D+ LK+W+     CLR+ VGH      
Sbjct: 3   RGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 62

Query: 81  VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
             +  +            ++    G   H       TVR M
Sbjct: 63  SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM 103

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.8 bits (104), Expect = 3e-06
 Identities = 29/217 (13%), Positives = 66/217 (30%), Gaps = 12/217 (5%)

Query: 5   HLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNI 62
            +A    +H VH Y+    K   +   K H   V+ V +    + IV+  TD    +W +
Sbjct: 21  QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 80

Query: 63  NKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML 122
                  + V    ++    +    +       + S  I      +    +    ++  +
Sbjct: 81  KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI 140

Query: 123 ESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY---YKGLSKHMHAYRFDTVRSMLER 179
            S+ +      N          +A GS +    I+    K + +      + +     E 
Sbjct: 141 RSTVLSLDWHPNS-------VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 193

Query: 180 DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI 216
                 +  +V  VC+      +   +    + +   
Sbjct: 194 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 230

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.5 bits (103), Expect = 4e-06
 Identities = 11/94 (11%), Positives = 28/94 (29%)

Query: 28  AVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG 87
              +GH  +V          +++ + D  +++++      L    GH      +  A  G
Sbjct: 6   TTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65

Query: 88  DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121
             V+  ++        K           ++    
Sbjct: 66  ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRC 99

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (98), Expect = 2e-05
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
            S ++    +++  + Y+LR+ K   A        +  V F  K  + +   D Q  L  
Sbjct: 292 VSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI 351

Query: 62  IN 63
           ++
Sbjct: 352 LD 353

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 3e-04
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)

Query: 5   HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK 64
           ++  G+ D  +  YD    K+ L    GH   V  +K+ +   +VS STD  +++W+I K
Sbjct: 25  YVITGADDKMIRVYDS-INKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 83

Query: 65  PNCLRSFVGHI--NDKNFVGLATDGDYVACGSENNSLYIY 102
             C   F GH        +    +  Y+  GS +N+L+++
Sbjct: 84  GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 123

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.1 bits (102), Expect = 4e-06
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 48  IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV-GLATDGDYVACGSENNSLYIY 102
           I SAS D  +K+WN+      ++       ++   G+      +   S N  +   
Sbjct: 253 IASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.0 bits (86), Expect = 5e-04
 Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 1   MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL--NKEDIVSASTDSQLK 58
            +   +A  SAD  +  +++  T +         +       +   K+ +VS S +  + 
Sbjct: 248 PDGTKIASASADKTIKIWNVA-TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 306

Query: 59  LWNI 62
             N 
Sbjct: 307 FVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 35.3 bits (79), Expect = 0.004
 Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 1/69 (1%)

Query: 48  IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS 107
           I   +  S +    +        +  H +       +  G Y A G  + ++ I+    +
Sbjct: 32  IQYCNGTS-VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT 90

Query: 108 KHMHAYRFD 116
            H+      
Sbjct: 91  THILKTTIP 99

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.8 bits (101), Expect = 6e-06
 Identities = 7/58 (12%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

Query: 48  IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLA---TDGDYVACGSENNSLYIY 102
             +   D+ +++W++    C++ +           +    T    +   S + +L  Y
Sbjct: 266 FATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.9 bits (91), Expect = 1e-04
 Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 5/66 (7%)

Query: 1   MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSY----VKFLNKEDIVSASTDSQ 56
           ++S   A   AD  +  +D+  T + +  +   ++ +      V       I+S S D  
Sbjct: 261 LDSQKFATVGADATIRVWDVT-TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 319

Query: 57  LKLWNI 62
           L  + +
Sbjct: 320 LNFYEL 325

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.3 bits (100), Expect = 9e-06
 Identities = 24/204 (11%), Positives = 53/204 (25%), Gaps = 20/204 (9%)

Query: 29  VFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHIND----------- 77
             K H   +  V   N    VS S D  LK+W+    +         +            
Sbjct: 9   AGKAHDADIFSVSACNSF-TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67

Query: 78  --KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF 135
             +     A +   VA  S +  L  Y            F+ +  +             +
Sbjct: 68  VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW 127

Query: 136 V--GLATDGDYVACGSENNSLYIYY---KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV 190
                      +       + YI+         +     +     +     +    ++F 
Sbjct: 128 GASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA 187

Query: 191 SAVCWRQLSRVLVAANSQGIIKIY 214
           ++V   +   ++    + G ++I 
Sbjct: 188 TSVDISE-RGLIATGFNNGTVQIS 210

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (99), Expect = 1e-05
 Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 2/71 (2%)

Query: 33  HRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVA 91
           H   V  +KF       VS   D+ L  W       +       +      ++ D  Y+ 
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIV 322

Query: 92  CGSENNSLYIY 102
            GS +    +Y
Sbjct: 323 TGSGDKKATVY 333

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 6/62 (9%), Positives = 17/62 (27%), Gaps = 3/62 (4%)

Query: 2   NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLW 60
                     D+ ++ +                 +V        +  IV+ S D +  ++
Sbjct: 276 CGKWFVSTGKDNLLNAWRTPYGA--SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVY 333

Query: 61  NI 62
            +
Sbjct: 334 EV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 17/90 (18%), Positives = 27/90 (30%), Gaps = 5/90 (5%)

Query: 32  GHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLR-----SFVGHINDKNFVGLATD 86
            H + V  V   N    V       +K+W+I+ P           +   N      L  D
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD 108

Query: 87  GDYVACGSENNSLYIYYKGLSKHMHAYRFD 116
           G  +  G E ++L I+              
Sbjct: 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELT 138

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (81), Expect = 0.002
 Identities = 11/157 (7%), Positives = 35/157 (22%), Gaps = 14/157 (8%)

Query: 1   MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLW 60
           +++      +             +            +  + +    + ++   +S     
Sbjct: 191 ISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV 250

Query: 61  NINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS 120
                        H +    +  A  G +     ++N L  +                  
Sbjct: 251 LHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW--------------RTPY 296

Query: 121 MLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157
                     +      ++ D  Y+  GS +    +Y
Sbjct: 297 GASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVY 333

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.9 bits (96), Expect = 3e-05
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 4   CHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNKEDIVSASTDSQLKLWN 61
             LA GS D+ V  +++    +   + K      +V+ V +LN+  IVSA  DS +K WN
Sbjct: 237 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296

Query: 62  I 62
           +
Sbjct: 297 V 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.0 bits (86), Expect = 5e-04
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 27 LAVFKGHRKAVSYVKF-LNKEDIVSASTDSQLKLWNINKPNCLRSFVGH 74
            V  GH KA++ +    + + + SA  +  +  W+I+     R F   
Sbjct: 5  DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 53

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 35.0 bits (78), Expect = 0.004
 Identities = 8/57 (14%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 48  IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLA--TDGDYVACGSENNSLYIY 102
           + + S D+ + +WN+NKP+     +   +  + V      +   +    +++++  +
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 9e-05
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 21 RNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGH 74
          R++ + +       K V  +++ + + IVS   D+ +K+W+ N   C R   GH
Sbjct: 2  RHSLQRIHCRSETSKGVYCLQY-DDQKIVSGLRDNTIKIWDKNTLECKRILTGH 54

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 8e-04
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 1   MNSCHLAFGSADHCVHYYDLRN--------TKEALAVFKGHRKAVSYVKFLNKEDIVSAS 52
            ++  +  G+ D  +  +DL              L     H   V  ++F ++  IVS+S
Sbjct: 226 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSS 284

Query: 53  TDSQLKLWN 61
            D  + +W+
Sbjct: 285 HDDTILIWD 293

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 2e-04
 Identities = 9/92 (9%), Positives = 29/92 (31%), Gaps = 5/92 (5%)

Query: 29  VFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG----L 83
           + +  +  +S +K +  +  ++  S D  L ++  +        +  +  K+ +     +
Sbjct: 6   IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65

Query: 84  ATDGDYVACGSENNSLYIYYKGLSKHMHAYRF 115
                 +  G+    +       S    A   
Sbjct: 66  DNTDLQIYVGTVQGEILKVDLIGSPSFQALTN 97

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.2 bits (79), Expect = 0.004
 Identities = 9/73 (12%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 31  KGHRKAVSYVKFLNKEDIVSA-STDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY 89
                 V+ ++F  +   +    +D  +  WN+     +++F    N+ + V +A   + 
Sbjct: 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNI 306

Query: 90  VACGSENNSLYIY 102
           +   + +++    
Sbjct: 307 LCLATSDDTFKTN 319

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	221
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.98
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.98
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.97
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.97
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.97
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.96
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.96
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.96
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.95
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.95
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.95
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.94
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.93
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.92
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.92
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.92
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.92
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.85
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.84
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.84
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.81
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.81
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.81
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.78
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.71
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.69
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.68
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.55
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.52
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.49
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.48
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.43
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.41
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.41
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.24
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.22
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.22
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.14
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.13
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.12
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.1
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.09
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.04
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.01
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.97
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.94
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.79
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.75
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.7
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.7
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.52
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.44
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.31
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.22
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.22
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.93
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.82
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.56
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.52
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	97.52
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.5
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.39
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.3
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.23
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.14
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	96.98
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.97
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.97
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.85
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	96.81
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	96.49
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	96.46
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.43
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.01
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	95.87
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	95.12
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	94.99
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	94.85
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	94.53
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	94.22
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	93.54
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.41
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	89.21
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	86.58
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	86.02
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	82.59

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.9e-39  Score=231.93  Aligned_cols=199  Identities=15%  Similarity=0.180  Sum_probs=170.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce-eeEEEEeccCceEEEEEecCC-cEEEecC--CCcEEEEEcCCCccceeeecccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE-ALAVFKGHRKAVSYVKFLNKE-DIVSAST--DSQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~-~l~s~~~--d~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      |||++||+|+.||.|+|||+..... ....+..|.++|.+++|+|++ .+++++.  +..+++|++++++....+.+|..
T Consensus        68 p~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~  147 (311)
T d1nr0a1          68 PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR  147 (311)
T ss_dssp             TTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSS
T ss_pred             CCCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999984433 335678899999999999855 4777765  56699999999999999999999


Q ss_pred             ceeEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662         77 DKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY  155 (221)
Q Consensus        77 ~v~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  155 (221)
                      .|.+++|+|++++ +++|+.|+.|++||+++++....             +..|...|+++.|+|+++++++++.|+.|+
T Consensus       148 ~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~-------------~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~  214 (311)
T d1nr0a1         148 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKST-------------FGEHTKFVHSVRYNPDGSLFASTGGDGTIV  214 (311)
T ss_dssp             CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEE-------------ECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             ccccccccccceeeecccccccccccccccccccccc-------------cccccccccccccCcccccccccccccccc
Confidence            9999999999985 78899999999999998877655             367888999999999999999999999999


Q ss_pred             EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +||+.++.....+...        .....+|...|++++|+|++++|++|+.||.|++||+.+++
T Consensus       215 ~~d~~~~~~~~~~~~~--------~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~  271 (311)
T d1nr0a1         215 LYNGVDGTKTGVFEDD--------SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK  271 (311)
T ss_dssp             EEETTTCCEEEECBCT--------TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             cccccccccccccccc--------ccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence            9999988766555321        11234688899999999999999999999999999998875

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.8e-38  Score=224.34  Aligned_cols=199  Identities=21%  Similarity=0.365  Sum_probs=172.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-----------------------------------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-----------------------------------   45 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------------------------   45 (221)
                      |++++|++|+.||.|+|||+. +++.+.++.+|...|.+++|+|+                                   
T Consensus        27 p~~~~l~s~s~Dg~i~iWd~~-~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (317)
T d1vyhc1          27 PVFSVMVSASEDATIKVWDYE-TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS  105 (317)
T ss_dssp             SSSSEEEEEESSSCEEEEETT-TCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE
T ss_pred             CCCCEEEEEeCCCeEEEEECC-CCCEEEEEeCCCCcEEEEeeecccccccccccccccccccccccccccccccccccce
Confidence            689999999999999999998 67777788778777777777643                                   


Q ss_pred             --------CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---
Q psy10662         46 --------EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---  114 (221)
Q Consensus        46 --------~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---  114 (221)
                              ..+++++.|+.+++||+++++.+..+..|...+.+++|+|++.++++++.|+.|++|++.+++....+.   
T Consensus       106 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~  185 (317)
T d1vyhc1         106 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR  185 (317)
T ss_dssp             EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred             eeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCC
Confidence                    236677888999999999999888898999999999999999999999999999999998877665543   


Q ss_pred             ----------------------------------------------eecccceeEeeEEEeeCceEEEEEecCCCEEEEe
Q psy10662        115 ----------------------------------------------FDTVRSMLESSFVGHINDKNFVGLATDGDYVACG  148 (221)
Q Consensus       115 ----------------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  148 (221)
                                                                    |+......+..+.+|...|.+++|+|++++|++|
T Consensus       186 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~  265 (317)
T d1vyhc1         186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC  265 (317)
T ss_dssp             SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEE
T ss_pred             CCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEE
Confidence                                                          3344556667788899999999999999999999


Q ss_pred             cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      +.||.|++||+++++.+..+.               +|...|++++|+|++++|++|+.||.|++||
T Consensus       266 ~~dg~i~iwd~~~~~~~~~~~---------------~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         266 ADDKTLRVWDYKNKRCMKTLN---------------AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             ETTTEEEEECCTTSCCCEEEE---------------CCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             ECCCeEEEEECCCCcEEEEEc---------------CCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            999999999999888776664               6888999999999999999999999999997

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.5e-37  Score=225.13  Aligned_cols=188  Identities=15%  Similarity=0.211  Sum_probs=161.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC--------------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP--------------   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~--------------   65 (221)
                      |++++||+|+.||.|+|||+. +++.+..+..|..+|.+++|+|+ ..+++++.|+.+++|+....              
T Consensus        65 ~~~~~l~sgs~Dg~v~iWd~~-~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~  143 (340)
T d1tbga_          65 TDSRLLVSASQDGKLIIWDSY-TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT  143 (340)
T ss_dssp             TTSSEEEEEETTTEEEEEETT-TTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCS
T ss_pred             CCCCEEEEEECCCceeeeecc-cceeEEEEecccccEEeeEeeccceeeeeecccceeecccccccccccccceeccccc
Confidence            689999999999999999998 78888999999999999999974 55888888888888875321              


Q ss_pred             -------------------------------------------------------------------------ccceeee
Q psy10662         66 -------------------------------------------------------------------------NCLRSFV   72 (221)
Q Consensus        66 -------------------------------------------------------------------------~~~~~~~   72 (221)
                                                                                               +++..+.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~  223 (340)
T d1tbga_         144 GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT  223 (340)
T ss_dssp             SCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEe
Confidence                                                                                     1122233


Q ss_pred             ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662         73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN  152 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  152 (221)
                      +|...|++++|+|++++|++++.|+.|++||++..+.+..+           ....+...+.+++|+|++++|++|+.||
T Consensus       224 ~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~-----------~~~~~~~~i~~~~~s~~~~~l~~g~~dg  292 (340)
T d1tbga_         224 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY-----------SHDNIICGITSVSFSKSGRLLLAGYDDF  292 (340)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-----------CCTTCCSCEEEEEECSSSCEEEEEETTS
T ss_pred             CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccccccc-----------ccccccCceEEEEECCCCCEEEEEECCC
Confidence            67888999999999999999999999999999988876654           1234566799999999999999999999


Q ss_pred             eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                      .|++||+.+++.+..+.               +|..+|++++|+|++++|++|+.||.|++||
T Consensus       293 ~i~iwd~~~~~~~~~~~---------------~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         293 NCNVWDALKADRAGVLA---------------GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             CEEEEETTTCCEEEEEC---------------CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEEECCCCcEEEEEc---------------CCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            99999999888766553               7888999999999999999999999999997

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-36  Score=216.36  Aligned_cols=199  Identities=14%  Similarity=0.234  Sum_probs=170.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecC-CceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRN-TKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v   78 (221)
                      ||+++|++|+.||.|++||+.. ..+....+..|...+.+++|+|+ ..+++++.|+.+++|++++++.......|...+
T Consensus       107 ~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v  186 (337)
T d1gxra_         107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  186 (337)
T ss_dssp             TTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred             CCCCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999863 33556678889999999999985 458899999999999999999888888899999


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe----------------------------ecccceeEeeEEEee
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF----------------------------DTVRSMLESSFVGHI  130 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~  130 (221)
                      .+++|++++..+++++.|+.+++||+++++.+..+..                            +..... ......|.
T Consensus       187 ~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~  265 (337)
T d1gxra_         187 SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-KYQLHLHE  265 (337)
T ss_dssp             EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-EEEECCCS
T ss_pred             ccccccccccccccccccccccccccccceeecccccccceEEEEEcccccccceeccccccccccccccc-cccccccc
Confidence            9999999999999999999999999999988776541                            111111 12345678


Q ss_pred             CceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCe
Q psy10662        131 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGI  210 (221)
Q Consensus       131 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  210 (221)
                      ..|++++|+|++++|++++.||.|++||+.+++.+..+                .|...|.+++|+|++++|++|+.||.
T Consensus       266 ~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~----------------~~~~~v~~~~~s~d~~~l~t~s~D~~  329 (337)
T d1gxra_         266 SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS----------------KESSSVLSCDISVDDKYIVTGSGDKK  329 (337)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE----------------ECSSCEEEEEECTTSCEEEEEETTSC
T ss_pred             cccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEc----------------cCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence            89999999999999999999999999999988776554                36678999999999999999999999


Q ss_pred             EEEEEC
Q psy10662        211 IKIYVI  216 (221)
Q Consensus       211 i~iw~~  216 (221)
                      |++||+
T Consensus       330 I~vWdl  335 (337)
T d1gxra_         330 ATVYEV  335 (337)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            999997

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.3e-36  Score=223.73  Aligned_cols=211  Identities=14%  Similarity=0.130  Sum_probs=166.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccc--eeeecccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCL--RSFVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~--~~~~~~~~   76 (221)
                      ||+++||+|+.||.|+|||+.... ..+..+++|.++|.+++|+|+ ++|++++.|++|++||++++...  ..+..|..
T Consensus        17 ~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~   96 (371)
T d1k8kc_          17 KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINR   96 (371)
T ss_dssp             TTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSS
T ss_pred             CCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccc
Confidence            689999999999999999997322 466778999999999999974 56899999999999999876543  34567888


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI  156 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  156 (221)
                      .|.+++|+|+++++++++.|+.+++|++.........         ......|...|.+++|+|++++|++|+.|+.|++
T Consensus        97 ~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~---------~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v  167 (371)
T d1k8kc_          97 AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC---------KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI  167 (371)
T ss_dssp             CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE---------EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             cccccccccccccceeecccCcceeeeeecccccccc---------cccccccccccccccccccccceeccccCcEEEE
Confidence            9999999999999999999999999987655433221         1223457788999999999999999999999999


Q ss_pred             EEcCCCCceeeeeeec---ccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        157 YYKGLSKHMHAYRFDT---VRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |+..............   .............|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~  234 (371)
T d1k8kc_         168 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM  234 (371)
T ss_dssp             EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT
T ss_pred             EeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeeccc
Confidence            9987654332221111   011112223345788899999999999999999999999999997654

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.4e-35  Score=213.20  Aligned_cols=189  Identities=11%  Similarity=0.185  Sum_probs=162.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccc--eeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCL--RSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~--~~~~~~~~~   77 (221)
                      |+|+.|+.+. ++.|.+|++. .......+.+|...|++++|+|+ .+|++|+.||+|++||+.+++..  ..+..|..+
T Consensus        27 ~~g~~l~~~~-~~~v~i~~~~-~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~  104 (311)
T d1nr0a1          27 PAGDKIQYCN-GTSVYTVPVG-SLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGP  104 (311)
T ss_dssp             TTSSEEEEEE-TTEEEEEETT-CSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSC
T ss_pred             CCCCEEEEEe-CCEEEEEECC-CCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCc
Confidence            6888998885 6679999998 67777888999999999999985 56889999999999999887654  446789999


Q ss_pred             eeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE-EEEecCCCeE
Q psy10662         78 KNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY-VACGSENNSL  154 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i  154 (221)
                      |.+++|+|+++++++++.  +..+++|++++++....             +.+|...|.+++|+|++++ +++|+.|+.|
T Consensus       105 v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~-------------l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i  171 (311)
T d1nr0a1         105 VKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGN-------------LTGQARAMNSVDFKPSRPFRIISGSDDNTV  171 (311)
T ss_dssp             EEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBC-------------CCCCSSCEEEEEECSSSSCEEEEEETTSCE
T ss_pred             ccccccccccccccccccccccccccccccccccccc-------------ccccccccccccccccceeeeccccccccc
Confidence            999999999999988875  45699999988776543             4678889999999999885 7889999999


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ++||+++.+....+               ..|...|++++|+|++++|++++.|+.|++|++.++
T Consensus       172 ~i~d~~~~~~~~~~---------------~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~  221 (311)
T d1nr0a1         172 AIFEGPPFKFKSTF---------------GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG  221 (311)
T ss_dssp             EEEETTTBEEEEEE---------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred             cccccccccccccc---------------ccccccccccccCccccccccccccccccccccccc
Confidence            99999887665444               267889999999999999999999999999998765

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-34  Score=209.42  Aligned_cols=202  Identities=10%  Similarity=0.216  Sum_probs=164.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc--eeeE--EEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC--ccceeeec
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK--EALA--VFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP--NCLRSFVG   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~--~~~~--~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~--~~~~~~~~   73 (221)
                      |+|++|++|+ ||.|+|||+.+..  ..+.  ....|.+.|.+++|+|+ ..|++++.|+.|++||+...  +....+..
T Consensus        61 ~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  139 (337)
T d1gxra_          61 NPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS  139 (337)
T ss_dssp             SSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEEC
T ss_pred             CCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccccccccccccccc
Confidence            6899999997 8999999997432  2222  23468899999999985 56889999999999998754  44556678


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------------eecccceeEe
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRSMLES  124 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~  124 (221)
                      |...+.+++|+|++.++++++.|+.|++||+.+++......                             |+......+.
T Consensus       140 ~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~  219 (337)
T d1gxra_         140 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQ  219 (337)
T ss_dssp             SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeec
Confidence            88899999999999999999999999999998887655443                             2333333333


Q ss_pred             eEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE
Q psy10662        125 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA  204 (221)
Q Consensus       125 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  204 (221)
                      . ..+...|.+++|+|+++++++++.|+.+++||++..+....                ..|...|++++|+|++++|++
T Consensus       220 ~-~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----------------~~~~~~i~~v~~s~~g~~l~s  282 (337)
T d1gxra_         220 Q-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL----------------HLHESCVLSLKFAYCGKWFVS  282 (337)
T ss_dssp             E-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE----------------CCCSSCEEEEEECTTSSEEEE
T ss_pred             c-cccccceEEEEEcccccccceeccccccccccccccccccc----------------cccccccceEEECCCCCEEEE
Confidence            2 35678899999999999999999999999999987764322                257888999999999999999


Q ss_pred             ecCCCeEEEEECCccc
Q psy10662        205 ANSQGIIKIYVIPIRV  220 (221)
Q Consensus       205 ~~~dg~i~iw~~~~~~  220 (221)
                      ++.||.|++||+++++
T Consensus       283 ~s~Dg~i~iwd~~~~~  298 (337)
T d1gxra_         283 TGKDNLLNAWRTPYGA  298 (337)
T ss_dssp             EETTSEEEEEETTTCC
T ss_pred             EeCCCeEEEEECCCCC
Confidence            9999999999998765

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5e-35  Score=208.95  Aligned_cols=195  Identities=15%  Similarity=0.187  Sum_probs=156.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEE-EeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccc---eeee----
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVF-KGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL---RSFV----   72 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~---~~~~----   72 (221)
                      ||+++|++|+.||.|++||+. +++.++.+ ..|...|++++|+|++.+++++.|+.+++|+.......   ....    
T Consensus        22 ~dg~~l~s~s~Dg~v~vWd~~-~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~  100 (299)
T d1nr0a2          22 ADGKTLFSADAEGHINSWDIS-TGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSS  100 (299)
T ss_dssp             TTSSEEEEEETTSCEEEEETT-TCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSS
T ss_pred             CCCCEEEEEcCCCeEEEEECC-CCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEeccCCccccccccccccccc
Confidence            789999999999999999998 66666666 46899999999999889999999999999997532110   0000    


Q ss_pred             ---------------------------------ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeeccc
Q psy10662         73 ---------------------------------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVR  119 (221)
Q Consensus        73 ---------------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  119 (221)
                                                       .....+.+++|+|+++++++++.|+.|++||+++++....       
T Consensus       101 ~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~-------  173 (299)
T d1nr0a2         101 QPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEV-------  173 (299)
T ss_dssp             CEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEE-------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------
Confidence                                             1223467788888888999999999999999876654332       


Q ss_pred             ceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC
Q psy10662        120 SMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       120 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  199 (221)
                           ....|...|++++|+|++++|++++.|+.|++||+.++.....            ...+..|...|++++|+|++
T Consensus       174 -----~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~------------~~~~~~h~~~v~~l~~s~~~  236 (299)
T d1nr0a2         174 -----KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH------------TNSWTFHTAKVACVSWSPDN  236 (299)
T ss_dssp             -----EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC------------CCCCCCCSSCEEEEEECTTS
T ss_pred             -----ccccccccccccccccccccccccccccccccccccccccccc------------cccccccccccccccccccc
Confidence                 2356788999999999999999999999999999876654322            22345688899999999999


Q ss_pred             cEEEEecCCCeEEEEECCccc
Q psy10662        200 RVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       200 ~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ++|++|+.||.|++||+.+++
T Consensus       237 ~~l~sgs~dg~i~iwd~~~~~  257 (299)
T d1nr0a2         237 VRLATGSLDNSVIVWNMNKPS  257 (299)
T ss_dssp             SEEEEEETTSCEEEEETTCTT
T ss_pred             cceEEEcCCCEEEEEECCCCC
Confidence            999999999999999998653

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-34  Score=213.32  Aligned_cols=200  Identities=17%  Similarity=0.320  Sum_probs=151.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC--------------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP--------------   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~--------------   65 (221)
                      |++++|++|+.||.|++||.. .++.+..+.+|...|.+++|+++ ..+++++.++.+++||.++.              
T Consensus       131 ~~~~~l~s~~~dg~v~i~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~  209 (388)
T d1erja_         131 PDGKFLATGAEDRLIRIWDIE-NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTT  209 (388)
T ss_dssp             TTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEE
T ss_pred             CCCCcceeccccccccccccc-ccccccccccccccccccccccccccccccccceeeeeeecccccccccccccccccc
Confidence            688999999999999999998 67777788888888888888753 44666666677777765432              


Q ss_pred             ----------------------------ccceee-------eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeee
Q psy10662         66 ----------------------------NCLRSF-------VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHM  110 (221)
Q Consensus        66 ----------------------------~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~  110 (221)
                                                  .....+       .+|...|.+++|+|++++|++++.|+.|++||+++++..
T Consensus       210 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~  289 (388)
T d1erja_         210 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK  289 (388)
T ss_dssp             EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred             ccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccc
Confidence                                        222111       246678999999999999999999999999999877655


Q ss_pred             EEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662        111 HAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV  190 (221)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  190 (221)
                      ..... ............|...|.+++|+|++++|++|+.||.|++||+++++.+..+.               +|...|
T Consensus       290 ~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~---------------~H~~~V  353 (388)
T d1erja_         290 SDSKT-PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ---------------GHRNSV  353 (388)
T ss_dssp             ----------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE---------------CCSSCE
T ss_pred             ccccc-ccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEe---------------CCCCCE
Confidence            43321 12233445566788899999999999999999999999999999988877664               688888


Q ss_pred             eEEEE------cCCCcEEEEecCCCeEEEEECC
Q psy10662        191 SAVCW------RQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       191 ~~~~~------~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      .++++      +|++++|++|+.||.|++|+++
T Consensus       354 ~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         354 ISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             EEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            88875      6789999999999999999984

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.9e-34  Score=211.02  Aligned_cols=215  Identities=15%  Similarity=0.193  Sum_probs=163.5

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEE------------------eccCceEEEEEecC-CcEEEecCCCcEEEEE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK------------------GHRKAVSYVKFLNK-EDIVSASTDSQLKLWN   61 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~------------------~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd   61 (221)
                      |||++||+|+ |+.|+|||+. +++.+..+.                  .|...|++++|+|+ ..|++|+.||.|++||
T Consensus        72 ~dg~~lasg~-d~~i~iW~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~  149 (388)
T d1erja_          72 NDGEYLATGC-NKTTQVYRVS-DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWD  149 (388)
T ss_dssp             TTSSEEEEEC-BSCEEEEETT-TCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCCCEEEEEe-CCeEEEEEec-ccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceeccccccccccc
Confidence            6899999986 8999999997 555544442                  45667999999985 5688999999999999


Q ss_pred             cCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------------------------
Q psy10662         62 INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------------------------  114 (221)
Q Consensus        62 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------------------------  114 (221)
                      ...++.+..+.+|...|.++.+++++..+++++.++.+++||.++........                           
T Consensus       150 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i  229 (388)
T d1erja_         150 IENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAV  229 (388)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCE
T ss_pred             ccccccccccccccccccccccccccccccccccceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeE
Confidence            99999999899999999999999999999999999999999998876655443                           


Q ss_pred             --eecccceeEee-------EEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccc
Q psy10662        115 --FDTVRSMLESS-------FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD  185 (221)
Q Consensus       115 --~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (221)
                        ++.........       ..+|...|.+++|+|++++|++++.||.|++||+++............   .........
T Consensus       230 ~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~  306 (388)
T d1erja_         230 RVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS---GTCEVTYIG  306 (388)
T ss_dssp             EEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------------CEEEEEEC
T ss_pred             EEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccc---cceeeeccc
Confidence              12222211111       234677899999999999999999999999999987765433321111   111222346


Q ss_pred             cccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        186 TNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       186 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |...|.+++|+|++++|++|+.||.|++||+++++
T Consensus       307 ~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~  341 (388)
T d1erja_         307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN  341 (388)
T ss_dssp             CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred             ccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence            78889999999999999999999999999999875

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4e-33  Score=202.37  Aligned_cols=201  Identities=19%  Similarity=0.251  Sum_probs=160.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeecc--ccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGH--INDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~--~~~v   78 (221)
                      +|+++||+|+.||.|+|||+. +++++.++.+|.++|++++|+|++.|++++.|+.|++|++...+........  ....
T Consensus        21 ~~~~~l~tgs~Dg~i~vWd~~-~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~   99 (355)
T d1nexb2          21 FEDNYVITGADDKMIRVYDSI-NKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRC   99 (355)
T ss_dssp             EETTEEEEEETTTEEEEEETT-TTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred             ECCCEEEEEeCCCeEEEEECC-CCcEEEEEECCCCCEEEEEEcCCCEEEEEecccccccccccccccccccccccccccc
Confidence            468899999999999999998 7889999999999999999999999999999999999999988776655333  3345


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------------------------------
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------------------------  114 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------------------  114 (221)
                      ....+.+++.++++++.|+.|++||+.+........                                            
T Consensus       100 ~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  179 (355)
T d1nexb2         100 LDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY  179 (355)
T ss_dssp             EEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEET
T ss_pred             cccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecc
Confidence            566778889999999999999999987654432211                                            


Q ss_pred             ------eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccc
Q psy10662        115 ------FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNE  188 (221)
Q Consensus       115 ------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (221)
                            |+...........++...+.++.|+|+++++++++.|+.|++||++++..+..+.               +|..
T Consensus       180 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~---------------~h~~  244 (355)
T d1nexb2         180 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ---------------GHTA  244 (355)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC---------------CCSS
T ss_pred             cceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccc---------------cccc
Confidence                  2333444445556677788899999999999999999999999999887665553               6777


Q ss_pred             ceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      .|.+++|+  +++|++++.||.|++||++++
T Consensus       245 ~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~  273 (355)
T d1nexb2         245 LVGLLRLS--DKFLVSAAADGSIRGWDANDY  273 (355)
T ss_dssp             CCCEEEEC--SSEEEEECTTSEEEEEETTTC
T ss_pred             cccccccc--cceeeeeeccccccccccccc
Confidence            78888875  467888888888888888764

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.3e-33  Score=202.09  Aligned_cols=183  Identities=20%  Similarity=0.298  Sum_probs=155.3

Q ss_pred             eeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEE
Q psy10662         25 EALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  103 (221)
Q Consensus        25 ~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd  103 (221)
                      +..+++++|.++|++++|+|+ .+|++|+.||+|++||+.+++.+..+..|..+|.+++|+|++.++++++.|+.+.+|+
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~  125 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccc
Confidence            456789999999999999985 5699999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCee----eEEEE-----------------------------------------------------------------
Q psy10662        104 KGLSKH----MHAYR-----------------------------------------------------------------  114 (221)
Q Consensus       104 ~~~~~~----~~~~~-----------------------------------------------------------------  114 (221)
                      ......    ...+.                                                                 
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  205 (340)
T d1tbga_         126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD  205 (340)
T ss_dssp             SSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecC
Confidence            654321    11110                                                                 


Q ss_pred             -----eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662        115 -----FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF  189 (221)
Q Consensus       115 -----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (221)
                           |+.........+.+|...|++++|+|++++|++|+.|+.|++||++.......+.             ...+...
T Consensus       206 ~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~-------------~~~~~~~  272 (340)
T d1tbga_         206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-------------HDNIICG  272 (340)
T ss_dssp             TEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-------------CTTCCSC
T ss_pred             ceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccc-------------cccccCc
Confidence                 4445566667778899999999999999999999999999999998776654442             1245667


Q ss_pred             eeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        190 VSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |.+++|+|++++|++|+.||.|++||+.+++
T Consensus       273 i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~  303 (340)
T d1tbga_         273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKAD  303 (340)
T ss_dssp             EEEEEECSSSCEEEEEETTSCEEEEETTTCC
T ss_pred             eEEEEECCCCCEEEEEECCCEEEEEECCCCc
Confidence            9999999999999999999999999998765

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.3e-33  Score=204.84  Aligned_cols=201  Identities=11%  Similarity=0.034  Sum_probs=158.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccc----eeeecc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCL----RSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~----~~~~~~   74 (221)
                      |++++|++|+.|+.|+|||+.... +....+..|...|.+++|+|+ ..|++++.|+.+++|++......    .....|
T Consensus        61 p~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~  140 (371)
T d1k8kc_          61 PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI  140 (371)
T ss_dssp             TTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC
T ss_pred             CCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeeccccccccccccccc
Confidence            789999999999999999998322 334455678899999999985 55899999999999998765443    223567


Q ss_pred             ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE-----eecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662         75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-----FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                      ...|.+++|+|++++|++++.|+.|++||+..........     ..............|...+.+++|+|++++|++++
T Consensus       141 ~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~  220 (371)
T d1k8kc_         141 RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS  220 (371)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE
T ss_pred             ccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccc
Confidence            8899999999999999999999999999986543221111     01112334455677888999999999999999999


Q ss_pred             CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        150 ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       150 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      .|+.|++||+.++..+..+.               .|..+|.+++|+|++++|++|+ |+.+++|...
T Consensus       221 ~d~~i~iwd~~~~~~~~~~~---------------~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~  272 (371)
T d1k8kc_         221 HDSTVCLADADKKMAVATLA---------------SETLPLLAVTFITESSLVAAGH-DCFPVLFTYD  272 (371)
T ss_dssp             TTTEEEEEEGGGTTEEEEEE---------------CSSCCEEEEEEEETTEEEEEET-TSSCEEEEEE
T ss_pred             cCCcceEEeeecccceeeee---------------cccccceeeeecCCCCEEEEEc-CCceEEEEee
Confidence            99999999998887666553               5777899999999999888765 6777776654

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-32  Score=198.98  Aligned_cols=194  Identities=13%  Similarity=0.106  Sum_probs=155.5

Q ss_pred             CCceEEEEeCCCeEEEEEecCCc-------eeeEEEEeccCceEEEEEecCCc-EEEec--CCCcEEEEEcCCCccceee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTK-------EALAVFKGHRKAVSYVKFLNKED-IVSAS--TDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~-l~s~~--~d~~v~~wd~~~~~~~~~~   71 (221)
                      ++.+|++|+.||+|+|||+....       .....+..|.++|.+++|++++. +++++  .++.+++|+..+++.+..+
T Consensus        76 ~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  155 (325)
T d1pgua1          76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEV  155 (325)
T ss_dssp             TCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEEC
T ss_pred             CCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceee
Confidence            56899999999999999987321       11234556889999999998554 55544  4778999999999999999


Q ss_pred             eccccceeEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEec
Q psy10662         72 VGHINDKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACGS  149 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~  149 (221)
                      .+|...|.+++|+|++.+ +++++.|+.+++||+...+.....          .....|...|.+++|+|+ +.++++++
T Consensus       156 ~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~----------~~~~~~~~~v~~v~~~pd~~~~l~s~~  225 (325)
T d1pgua1         156 SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD----------RTHHKQGSFVRDVEFSPDSGEFVITVG  225 (325)
T ss_dssp             CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE----------CSSSCTTCCEEEEEECSTTCCEEEEEE
T ss_pred             eecccccccccccccccceEEEeecccccccccccccccceec----------ccccCCCCccEEeeeccccceeccccc
Confidence            999999999999999875 678999999999999887765443          123456778999999996 68899999


Q ss_pred             CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc---CCCcEEEEecCCCeEEEEECCccc
Q psy10662        150 ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR---QLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       150 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .|+.|++||+++++.+..+.               +|...+..+.|+   |+|++|++++.|+.|++||+++++
T Consensus       226 ~d~~i~iwd~~~~~~~~~l~---------------~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~  284 (325)
T d1pgua1         226 SDRKISCFDGKSGEFLKYIE---------------DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK  284 (325)
T ss_dssp             TTCCEEEEETTTCCEEEECC---------------BTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTE
T ss_pred             cccceeeeeecccccccccc---------------ccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCC
Confidence            99999999998887665543               444455444444   689999999999999999999875

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.5e-33  Score=204.70  Aligned_cols=208  Identities=14%  Similarity=0.231  Sum_probs=154.5

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEE----E-----EeccCceEEEEEec------CCcEEEecCCCcEEEEEcCCCcc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAV----F-----KGHRKAVSYVKFLN------KEDIVSASTDSQLKLWNINKPNC   67 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~----~-----~~~~~~i~~~~~~~------~~~l~s~~~d~~v~~wd~~~~~~   67 (221)
                      +.++++++.||.|++|++.........    .     ..+...+..++|.+      ...+++++.||.+++|++.....
T Consensus        79 ~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~  158 (393)
T d1sq9a_          79 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD  158 (393)
T ss_dssp             EEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred             CcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCc
Confidence            357889999999999998633211111    1     12445678888874      24588999999999999853210


Q ss_pred             ------------------ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEe
Q psy10662         68 ------------------LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH  129 (221)
Q Consensus        68 ------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (221)
                                        ......+...+.+++|+|++ ++++|+.|+.|++||+.+++++..+.       ....+.+|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~-------~~~~l~~h  230 (393)
T d1sq9a_         159 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE-------SQHSMINN  230 (393)
T ss_dssp             HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE-------CCC---CC
T ss_pred             ccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccc-------cccccccc
Confidence                              01112334568899999987 88999999999999999999887652       22345678


Q ss_pred             eCceEEEEEecCCCEEEEecCCC---eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        130 INDKNFVGLATDGDYVACGSENN---SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~~d~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      ...|.+++|+|++++|++|+.|+   .|++||+++++.+..+....  ..........+|...|++++|+|++++|++++
T Consensus       231 ~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~--~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s  308 (393)
T d1sq9a_         231 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPT--HSSQASLGEFAHSSWVMSLSFNDSGETLCSAG  308 (393)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC----------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred             cceEEEcccccccceeeeecCCCCcceeeecccccceeeeeecccc--ccccceeeeecccCceeeeccCCCCCeeEEEC
Confidence            99999999999999999999886   59999999998877664222  22223334568999999999999999999999


Q ss_pred             CCCeEEEEECCccc
Q psy10662        207 SQGIIKIYVIPIRV  220 (221)
Q Consensus       207 ~dg~i~iw~~~~~~  220 (221)
                      .|++|++||+++++
T Consensus       309 ~D~~v~vWd~~~g~  322 (393)
T d1sq9a_         309 WDGKLRFWDVKTKE  322 (393)
T ss_dssp             TTSEEEEEETTTTE
T ss_pred             CCCEEEEEECCCCC
Confidence            99999999999875

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.5e-33  Score=204.98  Aligned_cols=214  Identities=11%  Similarity=0.092  Sum_probs=158.3

Q ss_pred             CceEEEEeCCCeEEEEEecCCc--------------eeeEEE---EeccCceEEEEEecCCcEEEecCCCcEEEEEcCCC
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTK--------------EALAVF---KGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP   65 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~--------------~~~~~~---~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~   65 (221)
                      +.++++++.||.+++|++....              ......   ..+...+.+++|+|++.|++|+.|++|++||++++
T Consensus       136 ~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~  215 (393)
T d1sq9a_         136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTL  215 (393)
T ss_dssp             CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTT
T ss_pred             ccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeeccc
Confidence            5688999999999999985211              011111   12345689999999999999999999999999988


Q ss_pred             ccceee------eccccceeEEEEeCCCCEEEEecCCC---eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEE
Q psy10662         66 NCLRSF------VGHINDKNFVGLATDGDYVACGSENN---SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFV  136 (221)
Q Consensus        66 ~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  136 (221)
                      +++..+      .+|..+|.+++|+|++++|++|+.|+   .|++||+++++.+..+............+.+|...|+++
T Consensus       216 ~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l  295 (393)
T d1sq9a_         216 RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL  295 (393)
T ss_dssp             EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEE
T ss_pred             ccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeee
Confidence            776543      46888999999999999999999886   599999999999988765555555666677899999999


Q ss_pred             EEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccc-cccccc-----cccccceeEEEEcCCC----------c
Q psy10662        137 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML-ERDRNE-----DDTNEFVSAVCWRQLS----------R  200 (221)
Q Consensus       137 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~v~~~~~~~~~----------~  200 (221)
                      +|+|++++|++|+.|+.|++||+++++++..+.-+...-.. .....+     ......+.++.|.+.+          .
T Consensus       296 ~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (393)
T d1sq9a_         296 SFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNE  375 (393)
T ss_dssp             EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSC
T ss_pred             ccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcccceEEECccCceeccccCCCC
Confidence            99999999999999999999999999988877533211100 000000     1123446778776643          4


Q ss_pred             EEEEecCCCeEEEEEC
Q psy10662        201 VLVAANSQGIIKIYVI  216 (221)
Q Consensus       201 ~l~~~~~dg~i~iw~~  216 (221)
                      .|++++.|+.|++|.-
T Consensus       376 ~~~~~~~d~~ir~~~~  391 (393)
T d1sq9a_         376 SLCCVCLDRSIRWFRE  391 (393)
T ss_dssp             EEEEEETTTEEEEEEE
T ss_pred             EEEEEEcCCeEEEEeC
Confidence            5888899999999963

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-31  Score=186.65  Aligned_cols=201  Identities=16%  Similarity=0.262  Sum_probs=134.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee---------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF---------   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~---------   71 (221)
                      +|+++||+|+.||.|+|||+. +++++.++.+|.++|++++|+ ++.|++|+.|+.|++|++..+......         
T Consensus        23 ~d~~~l~sgs~Dg~i~vWd~~-~~~~~~~l~~H~~~V~~v~~~-~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~  100 (293)
T d1p22a2          23 YDDQKIVSGLRDNTIKIWDKN-TLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH  100 (293)
T ss_dssp             CCSSEEEEEESSSCEEEEESS-SCCEEEEECCCSSCEEEEECC-SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEE
T ss_pred             EcCCEEEEEeCCCeEEEEECC-CCcEEEEEecCCCCEeeeecc-cceeeccccccccccccccccccccccccccccccc
Confidence            589999999999999999998 788999999999999999985 468999999999999998765332211         


Q ss_pred             ----------------------------------eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---
Q psy10662         72 ----------------------------------VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---  114 (221)
Q Consensus        72 ----------------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---  114 (221)
                                                        ..|...+..+.+.  ...+++++.|+.+++||+++++.+..+.   
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~  178 (293)
T d1p22a2         101 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHK  178 (293)
T ss_dssp             EECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred             ccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCCcEEEEEcccc
Confidence                                              1233344444443  3467777788888888888777665543   


Q ss_pred             ------------------------eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        115 ------------------------FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       115 ------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                                              |+......+....++...+..  +++++.+|++|+.||.|++||+.........  
T Consensus       179 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~--  254 (293)
T d1p22a2         179 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAP--  254 (293)
T ss_dssp             SCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSC--
T ss_pred             cccccccCCCCeEEEecCCCEEEEEecccceeeeeecccceeeee--ccccceEEEEEcCCCEEEEEECCCCcccccc--
Confidence                                    122222222333333333332  3345556666666666666665432211100  


Q ss_pred             ecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662        171 DTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV  215 (221)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  215 (221)
                          ........+.+|...|++++|  ++++|++++.||.|++||
T Consensus       255 ----~~~~~~~~~~~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         255 ----AGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             ----TTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred             ----CCceeeEEecCCCCCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence                011122344578999999999  467899999999999997

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=5.3e-31  Score=188.20  Aligned_cols=196  Identities=16%  Similarity=0.250  Sum_probs=152.9

Q ss_pred             eeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEE
Q psy10662         25 EALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  103 (221)
Q Consensus        25 ~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd  103 (221)
                      ....++++|.++|++++|+|+ ..|++|+.||+|++||+++++.+..+.+|...|.+++|+|++.++++++.++.+.+|+
T Consensus         8 ~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~   87 (317)
T d1vyhc1           8 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD   87 (317)
T ss_dssp             SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred             CccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccc
Confidence            345689999999999999984 5689999999999999999999999999999999999998877777777777777776


Q ss_pred             CCCCeeeEEEE-----------------------------eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662        104 KGLSKHMHAYR-----------------------------FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL  154 (221)
Q Consensus       104 ~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  154 (221)
                      ....+....+.                             |+.........+.+|...+.+++|+|++++|++++.|+.|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v  167 (317)
T d1vyhc1          88 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV  167 (317)
T ss_dssp             TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeE
Confidence            55443322111                             3334444555667888999999999999999999999999


Q ss_pred             EEEEcCCCCceeeee----------eecccc-------------------------------------cccccccccccc
Q psy10662        155 YIYYKGLSKHMHAYR----------FDTVRS-------------------------------------MLERDRNEDDTN  187 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~----------~~~~~~-------------------------------------~~~~~~~~~~~~  187 (221)
                      ++|++.+.+....+.          +.+...                                     .......+.+|.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~  247 (317)
T d1vyhc1         168 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD  247 (317)
T ss_dssp             EEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred             EEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCC
Confidence            999998876654432          111000                                     011223345688


Q ss_pred             cceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        188 EFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       188 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ..|.+++|+|++++|++++.||.|++||+++++
T Consensus       248 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  280 (317)
T d1vyhc1         248 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR  280 (317)
T ss_dssp             SCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred             CCEEEEEECCCCCEEEEEECCCeEEEEECCCCc
Confidence            899999999999999999999999999998875

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4.2e-30  Score=185.45  Aligned_cols=187  Identities=19%  Similarity=0.361  Sum_probs=139.8

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee---------
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF---------   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~---------   71 (221)
                      ++|++||||+.||.|+|||+. ++++++++.+|.+.|.+++|+| +.|++++.|+.+++|+..........         
T Consensus        25 ~~g~~l~sgs~Dg~i~vWd~~-~~~~~~~~~~h~~~V~~v~~~~-~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (342)
T d2ovrb2          25 FCGNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWSSQMRD-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC  102 (342)
T ss_dssp             EETTEEEEEETTSCEEEEETT-TCCEEEECCCCSSCEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred             ECCCEEEEEeCCCeEEEEECC-CCCEEEEEeCCCCCEEEEEeCC-CccccceecccccccccccccceecccccceeEee
Confidence            478999999999999999998 7888999999999999999987 48999999999999997543211100         


Q ss_pred             -----------------------------------------------------------------------eccccceeE
Q psy10662         72 -----------------------------------------------------------------------VGHINDKNF   80 (221)
Q Consensus        72 -----------------------------------------------------------------------~~~~~~v~~   80 (221)
                                                                                             .+|.  ...
T Consensus       103 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~~  180 (342)
T d2ovrb2         103 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT--NRV  180 (342)
T ss_dssp             EEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCS--SCE
T ss_pred             eecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcc--ccc
Confidence                                                                                   0111  122


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      ..+.+++.++++++.||.|++||++.++.+..             +.+|...+.++++++  ++|++++.|+.|++||+.
T Consensus       181 ~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~-------------~~~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~  245 (342)
T d2ovrb2         181 YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-------------LTGHQSLTSGMELKD--NILVSGNADSTVKIWDIK  245 (342)
T ss_dssp             EEEEECSSEEEEEETTSCEEEEETTTCCEEEE-------------ECCCCSCEEEEEEET--TEEEEEETTSCEEEEETT
T ss_pred             ccccCCCCEEEEEeCCCeEEEeecccceeeeE-------------ecccccceeEEecCC--CEEEEEcCCCEEEEEecc
Confidence            23344566677777777777777766655543             467778888777654  699999999999999998


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ..+....+.            ....|...+.++.+  +++++++++.||.|++||+++++
T Consensus       246 ~~~~~~~~~------------~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~  291 (342)
T d2ovrb2         246 TGQCLQTLQ------------GPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGE  291 (342)
T ss_dssp             TCCEEEEEC------------STTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCC
T ss_pred             ccccccccc------------ccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCC
Confidence            876654442            22345666766666  46799999999999999999875

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.2e-30  Score=187.12  Aligned_cols=189  Identities=11%  Similarity=0.105  Sum_probs=147.5

Q ss_pred             CCCceEEEEeC--CCeEEEEEecCCceeeEEEEeccCceEEEEEecCC--cEEEecCCCcEEEEEcCCCccceee---ec
Q psy10662          1 MNSCHLAFGSA--DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE--DIVSASTDSQLKLWNINKPNCLRSF---VG   73 (221)
Q Consensus         1 ~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~~~~~~---~~   73 (221)
                      |++++|++++.  ++.+++|+.+ +++.+..+.+|...|.+++|+|.+  .+++++.|+.+++||+...+....+   ..
T Consensus       125 ~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~  203 (325)
T d1pgua1         125 FEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHK  203 (325)
T ss_dssp             TTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSC
T ss_pred             CCCCccceeeccccceEEEEeec-ccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccC
Confidence            56778877654  6789999998 678888999999999999999743  3778999999999999877665544   45


Q ss_pred             cccceeEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe---cCCCEEEEec
Q psy10662         74 HINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA---TDGDYVACGS  149 (221)
Q Consensus        74 ~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~  149 (221)
                      |...|.+++|+|+ +.++++++.|+.|++||+++++.+..+             .+|...+..+.|+   |++++|++++
T Consensus       204 ~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l-------------~~~~~~v~~~~~s~~~~dg~~l~s~s  270 (325)
T d1pgua1         204 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI-------------EDDQEPVQGGIFALSWLDSQKFATVG  270 (325)
T ss_dssp             TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC-------------CBTTBCCCSCEEEEEESSSSEEEEEE
T ss_pred             CCCccEEeeeccccceeccccccccceeeeeeccccccccc-------------cccccccccceeeeeccCCCEEEEEe
Confidence            6778999999996 578999999999999999988877654             4555555544444   6889999999


Q ss_pred             CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC-CcEEEEecCCCeEEEEEC
Q psy10662        150 ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       150 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~  216 (221)
                      .|+.|++||+++++.+..+...             .+...+..+++.+. +.+|++++.||.|++||+
T Consensus       271 ~D~~i~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         271 ADATIRVWDVTTSKCVQKWTLD-------------KQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             TTSEEEEEETTTTEEEEEEECC-------------TTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             CCCeEEEEECCCCCEEEEEEec-------------CCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            9999999999998877766422             22223333433332 347889999999999996

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-29  Score=181.23  Aligned_cols=191  Identities=15%  Similarity=0.284  Sum_probs=156.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV   81 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~   81 (221)
                      ....+++++.|+.|++||.. ..+.+..+.+|...+..+.+. +..+++++.||.|++||++.++.+..+..|...+.++
T Consensus       146 ~~~~~~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~  223 (342)
T d2ovrb2         146 DGRRVVSGAYDFMVKVWDPE-TETCLHTLQGHTNRVYSLQFD-GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM  223 (342)
T ss_dssp             CSSCEEEEETTSCEEEEEGG-GTEEEEEECCCSSCEEEEEEC-SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE
T ss_pred             ccceeeeecCCCeEEEeecc-cceeeEEEcCcccccccccCC-CCEEEEEeCCCeEEEeecccceeeeEecccccceeEE
Confidence            35678899999999999998 677888888888877776654 5679999999999999999999999999999999888


Q ss_pred             EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662         82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  161 (221)
Q Consensus        82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~  161 (221)
                      .+++  +++++++.|+.|++||+...+....+.          ....|...+.++.++  ++++++|+.||.|++||+++
T Consensus       224 ~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~t  289 (342)
T d2ovrb2         224 ELKD--NILVSGNADSTVKIWDIKTGQCLQTLQ----------GPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKT  289 (342)
T ss_dssp             EEET--TEEEEEETTSCEEEEETTTCCEEEEEC----------STTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred             ecCC--CEEEEEcCCCEEEEEeccccccccccc----------ccceeeeceeecccC--CCeeEEEcCCCEEEEEECCC
Confidence            8765  599999999999999998877765541          112345556666554  56999999999999999999


Q ss_pred             CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCe----EEEEECCc
Q psy10662        162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGI----IKIYVIPI  218 (221)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----i~iw~~~~  218 (221)
                      ++.+..+....          ..+|...|++++|+|++.+|++|+.||+    |++||++.
T Consensus       290 g~~i~~~~~~~----------~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         290 GEFIRNLVTLE----------SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             CCEEEEEEECT----------TGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             CCEEEEEeccc----------CCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            98877664221          1357788999999999999999998885    99999874

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=1.1e-29  Score=180.97  Aligned_cols=188  Identities=15%  Similarity=0.196  Sum_probs=144.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccce-eeeccccce
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLR-SFVGHINDK   78 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~-~~~~~~~~v   78 (221)
                      |++++++++ .++.+++|+..   +.....  ....+.+++|+|+ ..+++++.|+.|++||+++++... ....|...|
T Consensus       109 ~~g~~~~~~-~~~~i~~~~~~---~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i  182 (299)
T d1nr0a2         109 ADGDIAVAA-CYKHIAIYSHG---KLTEVP--ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI  182 (299)
T ss_dssp             TTSSCEEEE-ESSEEEEEETT---EEEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCE
T ss_pred             ccccccccc-ccccccccccc---cccccc--cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            466666665 45689999854   222222  4456889999985 558899999999999998776543 335688899


Q ss_pred             eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662         79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  158 (221)
Q Consensus        79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  158 (221)
                      .+++|+|+++++++++.|+.|++||+.++......          ..+.+|...|++++|+|++++|++|+.||.|++||
T Consensus       183 ~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~----------~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd  252 (299)
T d1nr0a2         183 TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT----------NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWN  252 (299)
T ss_dssp             EEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC----------CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccc----------ccccccccccccccccccccceEEEcCCCEEEEEE
Confidence            99999999999999999999999998876554321          23467888999999999999999999999999999


Q ss_pred             cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +++........            ....+...+..+.| +++++|++++.|+.|++||++
T Consensus       253 ~~~~~~~~~~~------------~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         253 MNKPSDHPIII------------KGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             TTCTTSCCEEE------------TTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             CCCCCcceEEE------------ecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence            98765433221            11134455666655 567899999999999999985

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.2e-29  Score=181.40  Aligned_cols=220  Identities=11%  Similarity=0.031  Sum_probs=145.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecC-C-cEEEecCCCcEEEEEcCCCccceeeecccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNK-E-DIVSASTDSQLKLWNINKPNCLRSFVGHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~-~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~   76 (221)
                      |++++||+|+.||+|+|||+.....  .+....+|.++|.+++|+|+ + .|++|+.|+.|++|++...........+..
T Consensus        21 p~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~  100 (342)
T d1yfqa_          21 PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEA  100 (342)
T ss_dssp             GGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCC
T ss_pred             CCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccccccccccccccc
Confidence            6899999999999999999973322  23334469999999999963 3 588999999999999988776655544433


Q ss_pred             -ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------------------eecccc
Q psy10662         77 -DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------------------FDTVRS  120 (221)
Q Consensus        77 -~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------------~~~~~~  120 (221)
                       ......+.++...+++++.++.+++||++.........                                   |+....
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~  180 (342)
T d1yfqa_         101 NLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLC  180 (342)
T ss_dssp             CSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCC
T ss_pred             ccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccC
Confidence             33444556667778888888888888764332211111                                   010000


Q ss_pred             e---eEeeEEEeeCceEEEEE-ecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc
Q psy10662        121 M---LESSFVGHINDKNFVGL-ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR  196 (221)
Q Consensus       121 ~---~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  196 (221)
                      .   .............+..+ .+++..+++++.||.+.+|+...........................|...|++++|+
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s  260 (342)
T d1yfqa_         181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS  260 (342)
T ss_dssp             TTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC
T ss_pred             cccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEec
Confidence            0   00011122233444444 4567889999999999999986554322111000001111222344677789999999


Q ss_pred             CCCcEEEEecCCCeEEEEECCccc
Q psy10662        197 QLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       197 ~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      |++++|++|+.||.|++||+++++
T Consensus       261 p~~~~lasg~~Dg~v~vWD~~~~~  284 (342)
T d1yfqa_         261 PRHKFLYTAGSDGIISCWNLQTRK  284 (342)
T ss_dssp             TTTCCEEEEETTSCEEEEETTTTE
T ss_pred             CCccEEEEECCCCEEEEEECCCCc
Confidence            999999999999999999998864

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.3e-28  Score=177.11  Aligned_cols=181  Identities=15%  Similarity=0.288  Sum_probs=149.6

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      ++++++++..|+.|++||+. ..+.+....++...+.++.|+| +..+++++.|+.|++||++++..+..+.+|...|.+
T Consensus       170 ~~~~~~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~  248 (355)
T d1nexb2         170 HGNIVVSGSYDNTLIVWDVA-QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGL  248 (355)
T ss_dssp             ETTEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCE
T ss_pred             ccceeeeecccceeeeeecc-cccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccc
Confidence            57889999999999999998 7788888888999999999997 566889999999999999999999999999999999


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEE-EEecCCCEEEEecCCCeEEEEEc
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFV-GLATDGDYVACGSENNSLYIYYK  159 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~d~~i~~~d~  159 (221)
                      +++++  +++++++.||.|++||+++.+..               +..|...+.++ .++++++++++| .|+.|++||+
T Consensus       249 ~~~~~--~~l~~~~~dg~i~iwd~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~  310 (355)
T d1nexb2         249 LRLSD--KFLVSAAADGSIRGWDANDYSRK---------------FSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNL  310 (355)
T ss_dssp             EEECS--SEEEEECTTSEEEEEETTTCCEE---------------EEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEET
T ss_pred             ccccc--ceeeeeeccccccccccccccee---------------cccccCCceEEEEEcCCCCEEEEE-eCCEEEEEEC
Confidence            99874  68999999999999999876543               24455666555 456777776665 5899999999


Q ss_pred             CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      ++++.+...              ..+|...|.+++|+|+ .++++++.||.+++|-+
T Consensus       311 ~tg~~~~~~--------------~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         311 RSGKLVHAN--------------ILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             TTCCBCCSC--------------TTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred             CCCCEEEEE--------------ecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence            988764321              2367889999999987 57888899998766644

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.2e-27  Score=168.17  Aligned_cols=145  Identities=13%  Similarity=0.261  Sum_probs=115.1

Q ss_pred             CCcEEEecCC-CcEEEEEcCCCccceee-eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeeccccee
Q psy10662         45 KEDIVSASTD-SQLKLWNINKPNCLRSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML  122 (221)
Q Consensus        45 ~~~l~s~~~d-~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  122 (221)
                      +..+++++.+ +.+++|++...+....+ ..|...+++++|+|++.+|++++.||.|++||+.+++....          
T Consensus       130 ~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~----------  199 (287)
T d1pgua2         130 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTS----------  199 (287)
T ss_dssp             SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEC----------
T ss_pred             CcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccc----------
Confidence            3455555555 57999999776655544 34677899999999999999999999999999988776432          


Q ss_pred             EeeEEEeeCceEEEEEecC----------CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeE
Q psy10662        123 ESSFVGHINDKNFVGLATD----------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSA  192 (221)
Q Consensus       123 ~~~~~~~~~~v~~~~~~~~----------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  192 (221)
                        .+.+|...|.+++|+|.          +.++++|+.|+.|++||++.....              ...+.+|...|++
T Consensus       200 --~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~--------------~~~~~~h~~~V~~  263 (287)
T d1pgua2         200 --RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI--------------IKALNAHKDGVNN  263 (287)
T ss_dssp             --CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCC--------------EEETTSSTTCEEE
T ss_pred             --cccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeE--------------EEEeCCCCCCeEE
Confidence              24578889999999874          468999999999999998654321              1123478999999


Q ss_pred             EEEcCCCcEEEEecCCCeEEEEEC
Q psy10662        193 VCWRQLSRVLVAANSQGIIKIYVI  216 (221)
Q Consensus       193 ~~~~~~~~~l~~~~~dg~i~iw~~  216 (221)
                      ++|+|++ .|++++.|+.|++|++
T Consensus       264 v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         264 LLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             EEEEETT-EEEEEETTSCEEEEEE
T ss_pred             EEECCCC-EEEEEECCCeEEEEEE
Confidence            9999986 5888889999999996

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=5.1e-28  Score=180.67  Aligned_cols=208  Identities=6%  Similarity=-0.064  Sum_probs=154.4

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCcccee--e---eccccce
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRS--F---VGHINDK   78 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~--~---~~~~~~v   78 (221)
                      ++++.+.||.|+|||+. +++.+.++..|. .+..++|+|++ ++++++.|+++++||+.+++....  +   .+|.+.+
T Consensus        34 ~~V~~~~dg~v~vwD~~-t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~  111 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGD-SKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVE  111 (426)
T ss_dssp             EEEEETTTTEEEEEETT-TCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEE
T ss_pred             EEEEEcCCCEEEEEECC-CCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceE
Confidence            56788889999999998 788899998764 68999999855 478889999999999998875432  2   3566667


Q ss_pred             eEEEEeCCCCEEE-EecCCCeEEEEECCCCeeeEEEE-------------------------------------------
Q psy10662         79 NFVGLATDGDYVA-CGSENNSLYIYYKGLSKHMHAYR-------------------------------------------  114 (221)
Q Consensus        79 ~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~-------------------------------------------  114 (221)
                      .+++|+|||++++ ++..++.+.+||..+++.+....                                           
T Consensus       112 ~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~  191 (426)
T d1hzua2         112 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN  191 (426)
T ss_dssp             ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred             EeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEE
Confidence            7888899999865 45578999999988876654332                                           


Q ss_pred             ------------------------------------------e-------------------------------------
Q psy10662        115 ------------------------------------------F-------------------------------------  115 (221)
Q Consensus       115 ------------------------------------------~-------------------------------------  115 (221)
                                                                +                                     
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (426)
T d1hzua2         192 YKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTS  271 (426)
T ss_dssp             CSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEE
T ss_pred             eccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEec
Confidence                                                      0                                     


Q ss_pred             -----------------ecccceeEeeEEEeeCceEEEEEecCCCEEEE-------ecCCCeEEEEEcCCCCceeeeeee
Q psy10662        116 -----------------DTVRSMLESSFVGHINDKNFVGLATDGDYVAC-------GSENNSLYIYYKGLSKHMHAYRFD  171 (221)
Q Consensus       116 -----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-------~~~d~~i~~~d~~~~~~~~~~~~~  171 (221)
                                       .....+....+.+|...+..++|+|++++|++       +..+++|++||+.+++....+...
T Consensus       272 ~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~  351 (426)
T d1hzua2         272 HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI  351 (426)
T ss_dssp             CTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECH
T ss_pred             cCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEecc
Confidence                             00001233456677778899999999999994       556889999999988866544210


Q ss_pred             cccccccccccccccccceeEEEEcCCCcEEEEe-----cCCCeEEEEECCccc
Q psy10662        172 TVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-----NSQGIIKIYVIPIRV  220 (221)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-----~~dg~i~iw~~~~~~  220 (221)
                            .....+..+...|..++|||||++++.+     +.+|.|++||..+++
T Consensus       352 ------~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k  399 (426)
T d1hzua2         352 ------AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK  399 (426)
T ss_dssp             ------HHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred             ------chhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence                  0111233456678999999999977432     358999999999876

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1e-27  Score=169.92  Aligned_cols=181  Identities=15%  Similarity=0.175  Sum_probs=130.9

Q ss_pred             EEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccc-----------------
Q psy10662          6 LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL-----------------   68 (221)
Q Consensus         6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~-----------------   68 (221)
                      |++|+.||+|++||+. +.     ...|...|.+++++++..+++++.|+++++|++...+..                 
T Consensus        24 l~sgs~Dg~v~~Wd~~-~~-----~~~h~~~V~~~~~~~~~~~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~   97 (287)
T d1pgua2          24 LISGSYDGRIMEWSSS-SM-----HQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVL   97 (287)
T ss_dssp             TEEEETTSCEEETTTT-EE-----ECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEE
T ss_pred             EEEEeCCCeEEEEECC-CC-----CCCCCCCEEEEEecCCCeEEEEeeccccccccccccccccceeeeeeccCCceEEE
Confidence            8999999999999986 32     357999999999999889999999999999987542110                 


Q ss_pred             ------eeeec--------cccceeEEEEeCCCCEEEEecCC-CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCce
Q psy10662         69 ------RSFVG--------HINDKNFVGLATDGDYVACGSEN-NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDK  133 (221)
Q Consensus        69 ------~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  133 (221)
                            ..+..        ........+++|++..+++++.+ +.+++|++...+....+            ...+...+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~------------~~~~~~~v  165 (287)
T d1pgua2          98 TNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDL------------KTPLRAKP  165 (287)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEEC------------SSCCSSCE
T ss_pred             eecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccccceeeee------------eeccCCce
Confidence                  00000        00011233455566666555554 35777776544333221            23456789


Q ss_pred             EEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC----------CcEEE
Q psy10662        134 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL----------SRVLV  203 (221)
Q Consensus       134 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~~l~  203 (221)
                      ++++|+|++++|++|+.||.|++||+.++.....              ....|...|.+++|+|.          +.+|+
T Consensus       166 ~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~--------------~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~  231 (287)
T d1pgua2         166 SYISISPSETYIAAGDVMGKILLYDLQSREVKTS--------------RWAFRTSKINAISWKPAEKGANEEEIEEDLVA  231 (287)
T ss_dssp             EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEC--------------CSCCCSSCEEEEEECCCC------CCSCCEEE
T ss_pred             eEEEeccCccccccccccccccceeecccccccc--------------cccccccccceeeecccccccccccCCCCeeE
Confidence            9999999999999999999999999877654321              12368889999999875          46899


Q ss_pred             EecCCCeEEEEECCc
Q psy10662        204 AANSQGIIKIYVIPI  218 (221)
Q Consensus       204 ~~~~dg~i~iw~~~~  218 (221)
                      +|+.|+.|++|+++.
T Consensus       232 sgs~D~~i~iw~~~~  246 (287)
T d1pgua2         232 TGSLDTNIFIYSVKR  246 (287)
T ss_dssp             EEETTSCEEEEESSC
T ss_pred             eecCCCeEEEEECCC
Confidence            999999999999975

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.95  E-value=9.2e-27  Score=169.39  Aligned_cols=184  Identities=12%  Similarity=0.074  Sum_probs=148.0

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCC--CcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTD--SQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d--~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      .||+++|+++ +|.|++||+. .+...+ + .|...|.+++|+|++ .|++++.+  ..|++||+++++.. .+..|...
T Consensus        13 ~dG~~~a~~~-~g~v~v~d~~-~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-~~~~~~~~   87 (360)
T d1k32a3          13 LDGDLIAFVS-RGQAFIQDVS-GTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGN   87 (360)
T ss_dssp             CGGGCEEEEE-TTEEEEECTT-SSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCS
T ss_pred             CCCCEEEEEE-CCeEEEEECC-CCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-EeeCCCce
Confidence            1899999986 5799999997 555544 3 589999999999865 46655544  37999999877654 45678999


Q ss_pred             eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe---------
Q psy10662         78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG---------  148 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---------  148 (221)
                      +.+++|+|+++++++++.++.+.+|++.+++....+             ..+...+.+++|+|+|++|+.+         
T Consensus        88 v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~spdg~~la~~~~~~~~~~~  154 (360)
T d1k32a3          88 VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE-------------RSREAMITDFTISDNSRFIAYGFPLKHGETD  154 (360)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-------------ECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred             EEeeeecccccccceeccccccccccccccceeeee-------------ecccccccchhhccceeeeeeecccccccee
Confidence            999999999999999999999999999888765543             5677788899999999999854         


Q ss_pred             -cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        149 -SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       149 -~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                       ..++.+++||+.+++.....                .+...+..++|+|+|++|++++.++.+++|+...
T Consensus       155 ~~~~~~~~v~d~~~~~~~~~~----------------~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~  209 (360)
T d1k32a3         155 GYVMQAIHVYDMEGRKIFAAT----------------TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV  209 (360)
T ss_dssp             SCCEEEEEEEETTTTEEEECS----------------CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred             eccccceeeeccccCceeeec----------------ccccccccccccCCCCEEEEEeCCCceEcccccc
Confidence             34567899998776543222                3455678899999999999999999999998754

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.1e-26  Score=160.97  Aligned_cols=84  Identities=19%  Similarity=0.380  Sum_probs=71.8

Q ss_pred             eEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCC
Q psy10662         27 LAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL  106 (221)
Q Consensus        27 ~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~  106 (221)
                      +.....|...|+|+.|+ +++|++|+.||+|++||+++++++..+.+|.+.|.+++|  ++++|++++.|+.|++|++..
T Consensus         8 i~~~~~~~~~V~c~~~d-~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~   84 (293)
T d1p22a2           8 IHCRSETSKGVYCLQYD-DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT   84 (293)
T ss_dssp             EECCCSSCCCEEEEECC-SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred             EeccCCCCCCEEEEEEc-CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeeccccccccccccccc
Confidence            34455677889998874 678999999999999999999999999999999999887  567999999999999999987


Q ss_pred             CeeeEEE
Q psy10662        107 SKHMHAY  113 (221)
Q Consensus       107 ~~~~~~~  113 (221)
                      +......
T Consensus        85 ~~~~~~~   91 (293)
T d1p22a2          85 GEMLNTL   91 (293)
T ss_dssp             CCEEEEE
T ss_pred             ccccccc
Confidence            7665444

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.94  E-value=9.6e-26  Score=163.96  Aligned_cols=145  Identities=10%  Similarity=-0.019  Sum_probs=120.4

Q ss_pred             CCCceEEEEeCCC--eEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHLAFGSADH--CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |||++|++++.+.  .|++||++ +++ ...+..|...|.+++|+|+ .+|++++.++.+++|++.+++....+..|...
T Consensus        52 pDg~~l~~~~~~~g~~v~v~d~~-~~~-~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (360)
T d1k32a3          52 GDTKVAFIHGTREGDFLGIYDYR-TGK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM  129 (360)
T ss_dssp             SSSEEEEEEEETTEEEEEEEETT-TCC-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC
T ss_pred             CCCCEEEEEEcCCCCEEEEEECC-CCc-EEEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeeccccc
Confidence            7899998776553  79999997 444 4566779999999999985 56889999999999999999988888888889


Q ss_pred             eeEEEEeCCCCEEEEe----------cCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662         78 KNFVGLATDGDYVACG----------SENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC  147 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~----------~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  147 (221)
                      +.+++|+|+|++|+.+          ..++.+++||+.+++....              ..+...+..++|+|+|+.|++
T Consensus       130 ~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~--------------~~~~~~~~~~~~spdg~~l~~  195 (360)
T d1k32a3         130 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA--------------TTENSHDYAPAFDADSKNLYY  195 (360)
T ss_dssp             CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC--------------SCSSSBEEEEEECTTSCEEEE
T ss_pred             ccchhhccceeeeeeeccccccceeeccccceeeeccccCceeee--------------cccccccccccccCCCCEEEE
Confidence            9999999999998854          3456789999988765432              345667788999999999999


Q ss_pred             ecCCCeEEEEEcCC
Q psy10662        148 GSENNSLYIYYKGL  161 (221)
Q Consensus       148 ~~~d~~i~~~d~~~  161 (221)
                      ++.++.+.+||...
T Consensus       196 ~s~~~~~~~~d~~~  209 (360)
T d1k32a3         196 LSYRSLDPSPDRVV  209 (360)
T ss_dssp             EESCCCCCEECSSS
T ss_pred             EeCCCceEcccccc
Confidence            99999999998643

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.93  E-value=6.1e-23  Score=147.64  Aligned_cols=196  Identities=7%  Similarity=-0.115  Sum_probs=136.2

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEec--cCceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeeeccc----
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGH--RKAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFVGHI----   75 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~~~~----   75 (221)
                      +++++++.|++|+|||+. +.+.+..+..+  ...+.+++|+|++. + ++++.++.|.+||+.+++.+..+..+.    
T Consensus         2 ~~~vt~~~d~~v~v~D~~-s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~   80 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTE-KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER   80 (337)
T ss_dssp             EEEEEEETTTEEEEEETT-TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred             eEEEEEcCCCEEEEEECC-CCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCccc
Confidence            589999999999999998 78888888754  34578999998754 4 567789999999999887765543221    


Q ss_pred             -cc-----------------------------------------------------eeEEEEeCCCCEEEEecCCCeEEE
Q psy10662         76 -ND-----------------------------------------------------KNFVGLATDGDYVACGSENNSLYI  101 (221)
Q Consensus        76 -~~-----------------------------------------------------v~~~~~~~~~~~l~~~~~d~~v~i  101 (221)
                       ..                                                     +..++|+|+++++++++.+  +.+
T Consensus        81 ~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~  158 (337)
T d1pbyb_          81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD--LHV  158 (337)
T ss_dssp             EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSS--EEE
T ss_pred             ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCC--cce
Confidence             11                                                     2344555555555554433  445


Q ss_pred             EECCCCeeeEEEEee----------------------------------------------------cccce-eEeeEEE
Q psy10662        102 YYKGLSKHMHAYRFD----------------------------------------------------TVRSM-LESSFVG  128 (221)
Q Consensus       102 wd~~~~~~~~~~~~~----------------------------------------------------~~~~~-~~~~~~~  128 (221)
                      ||..+++....+...                                                    ..... ....+..
T Consensus       159 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (337)
T d1pbyb_         159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI  238 (337)
T ss_dssp             EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred             eeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecC
Confidence            555555544443210                                                    00011 1112233


Q ss_pred             eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662        129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ  208 (221)
Q Consensus       129 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  208 (221)
                      +...+..++++|++.+++.+  ++.|++||+.+++.+..+.                +...+.+++|+|||++|++++.|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~----------------~~~~~~~~~~s~dG~~l~v~~~~  300 (337)
T d1pbyb_         239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP----------------LPHSYYSVNVSTDGSTVWLGGAL  300 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE----------------CSSCCCEEEECTTSCEEEEESBS
T ss_pred             CCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc----------------CCCCEEEEEECCCCCEEEEEeCC
Confidence            44556677888888887765  5789999999988776653                34467899999999999999999


Q ss_pred             CeEEEEECCccc
Q psy10662        209 GIIKIYVIPIRV  220 (221)
Q Consensus       209 g~i~iw~~~~~~  220 (221)
                      +.|++||+.+++
T Consensus       301 ~~i~v~D~~t~~  312 (337)
T d1pbyb_         301 GDLAAYDAETLE  312 (337)
T ss_dssp             SEEEEEETTTCC
T ss_pred             CcEEEEECCCCc
Confidence            999999998865

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.92  E-value=3e-22  Score=141.99  Aligned_cols=202  Identities=9%  Similarity=0.030  Sum_probs=150.1

Q ss_pred             CCCceE-EEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc--EEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          1 MNSCHL-AFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED--IVSASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         1 ~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      |||++| ++++.++.|++||+. +++.+..+..+. .+..++|++++.  ++++..++.+.+|+..+++....+.. ...
T Consensus        41 pdG~~l~v~~~~~~~i~v~d~~-t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  117 (301)
T d1l0qa2          41 PDGTKVYVANAHSNDVSIIDTA-TNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKS  117 (301)
T ss_dssp             TTSSEEEEEEGGGTEEEEEETT-TTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSS
T ss_pred             CCCCEEEEEECCCCEEEEEECC-CCceeeeeeccc-cccccccccccccccccccccceeeecccccceeeeeccc-ccc
Confidence            688877 566788999999998 788888888665 468899997543  55677788999999999888877764 456


Q ss_pred             eeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEee---------cccc-------------------eeEeeEEE
Q psy10662         78 KNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFD---------TVRS-------------------MLESSFVG  128 (221)
Q Consensus        78 v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~---------~~~~-------------------~~~~~~~~  128 (221)
                      ..++.|+|++..+ +++..++.+.+|+..+.+.+..+...         ....                   ........
T Consensus       118 ~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (301)
T d1l0qa2         118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK  197 (301)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeeccccceeeecccccccccccccceeeeeccc
Confidence            7889999999976 56667889999999988877765411         1000                   00111122


Q ss_pred             eeCceEEEEEecCCCEEEEec---CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EE
Q psy10662        129 HINDKNFVGLATDGDYVACGS---ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VA  204 (221)
Q Consensus       129 ~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~  204 (221)
                      ....+..++|+++++.+++++   .++.|++||+.+++....+.                +...+.+++|+|||++| ++
T Consensus       198 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~----------------~~~~~~~va~spdg~~l~va  261 (301)
T d1l0qa2         198 VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP----------------VGPDPAGIAVTPDGKKVYVA  261 (301)
T ss_dssp             CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE----------------CCSSEEEEEECTTSSEEEEE
T ss_pred             ccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEc----------------CCCCEEEEEEeCCCCEEEEE
Confidence            334567789999999876654   34689999999887766553                23357899999999987 57


Q ss_pred             ecCCCeEEEEECCcccC
Q psy10662        205 ANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       205 ~~~dg~i~iw~~~~~~l  221 (221)
                      ++.|+.|++||+.++++
T Consensus       262 ~~~~~~i~v~D~~t~~~  278 (301)
T d1l0qa2         262 LSFCNTVSVIDTATNTI  278 (301)
T ss_dssp             ETTTTEEEEEETTTTEE
T ss_pred             ECCCCeEEEEECCCCeE
Confidence            77899999999998763

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=2.7e-23  Score=150.05  Aligned_cols=202  Identities=9%  Similarity=-0.036  Sum_probs=143.6

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEecCCc--EEEecCCCcEEEEEcCCCccceeeecc---
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKED--IVSASTDSQLKLWNINKPNCLRSFVGH---   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~--l~s~~~d~~v~~wd~~~~~~~~~~~~~---   74 (221)
                      +++++|++++.++.|.+||+. +++.+.++.. |...+.+++|+|++.  +++++.++.|++||+.+++.+..+...   
T Consensus         6 ~~~~~l~~~~~~~~v~v~D~~-t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~   84 (346)
T d1jmxb_           6 AGHEYMIVTNYPNNLHVVDVA-SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP   84 (346)
T ss_dssp             TTCEEEEEEETTTEEEEEETT-TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST
T ss_pred             CCCcEEEEEcCCCEEEEEECC-CCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccc
Confidence            578999999999999999998 7888888873 556788999998654  456678999999999998887665422   


Q ss_pred             ---ccceeEEEEeCCCCEEEEec------------CCCeEEEEECCCCee------------------------------
Q psy10662         75 ---INDKNFVGLATDGDYVACGS------------ENNSLYIYYKGLSKH------------------------------  109 (221)
Q Consensus        75 ---~~~v~~~~~~~~~~~l~~~~------------~d~~v~iwd~~~~~~------------------------------  109 (221)
                         ...+..++|+|+|+++++++            .++.+.+||..+++.                              
T Consensus        85 ~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (346)
T d1jmxb_          85 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPD  164 (346)
T ss_dssp             TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSS
T ss_pred             cccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeCCc
Confidence               12456788888888776553            355566666544322                              


Q ss_pred             -----------eEEEEe------------------------------------------------------ecccce-eE
Q psy10662        110 -----------MHAYRF------------------------------------------------------DTVRSM-LE  123 (221)
Q Consensus       110 -----------~~~~~~------------------------------------------------------~~~~~~-~~  123 (221)
                                 +..+..                                                      +..... ..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
T d1jmxb_         165 IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT  244 (346)
T ss_dssp             EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE
T ss_pred             ceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEE
Confidence                       222110                                                      000000 01


Q ss_pred             eeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE
Q psy10662        124 SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV  203 (221)
Q Consensus       124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  203 (221)
                      .....+...+..+.+++++.+++.... +.|.+||..+++.+..+.                +...+.+++|+|||++|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~----------------~~~~~~~va~s~DG~~l~  307 (346)
T d1jmxb_         245 QEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAAN----------------LDHTYYCVAFDKKGDKLY  307 (346)
T ss_dssp             EEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEE----------------CSSCCCEEEECSSSSCEE
T ss_pred             EEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEc----------------CCCCEEEEEEcCCCCEEE
Confidence            112234445667777887777776554 579999998887766553                234588999999999999


Q ss_pred             EecCCCeEEEEECCccc
Q psy10662        204 AANSQGIIKIYVIPIRV  220 (221)
Q Consensus       204 ~~~~dg~i~iw~~~~~~  220 (221)
                      +++.|+.|++||+.+++
T Consensus       308 v~~~d~~v~v~D~~t~~  324 (346)
T d1jmxb_         308 LGGTFNDLAVFNPDTLE  324 (346)
T ss_dssp             EESBSSEEEEEETTTTE
T ss_pred             EEeCCCcEEEEECccCC
Confidence            99999999999999875

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.92  E-value=3.3e-23  Score=154.57  Aligned_cols=198  Identities=7%  Similarity=-0.069  Sum_probs=148.5

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccc--eee---eccccce
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCL--RSF---VGHINDK   78 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~--~~~---~~~~~~v   78 (221)
                      ++++.+.+|.|.|||.. +++++..+..+ ..+..++|+|++ ++++++.|+.+++||+.+++..  ..+   ..|.+.+
T Consensus        34 ~~v~~~d~g~v~v~D~~-t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~  111 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGS-TYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIE  111 (432)
T ss_dssp             EEEEETTTTEEEEEETT-TCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEE
T ss_pred             EEEEEcCCCEEEEEECC-CCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeE
Confidence            45899999999999998 88999999876 469999999854 5888899999999999887643  222   3456667


Q ss_pred             eEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EEecCCCeEEE
Q psy10662         79 NFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-ACGSENNSLYI  156 (221)
Q Consensus        79 ~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~  156 (221)
                      .+..|+|||+++ ++++.++.|++||..+++.+..+.......  ......+......+.++|++..+ ++...++.|.+
T Consensus       112 ~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~  189 (432)
T d1qksa2         112 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTY--DEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL  189 (432)
T ss_dssp             ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECT--TTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred             EecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccc--cceeccCCCceeEEEECCCCCEEEEEEccCCeEEE
Confidence            777888999976 678889999999999999887763211110  00112345566778999999865 56667899999


Q ss_pred             EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662        157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~  220 (221)
                      ||..+.+......+              .+...+..++|+|+|+++++++ .++.+.+++..+++
T Consensus       190 ~d~~~~~~~~~~~i--------------~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~  240 (432)
T d1qksa2         190 VDYTDLNNLKTTEI--------------SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK  240 (432)
T ss_dssp             EETTCSSEEEEEEE--------------ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred             EEccCCCcceEEEE--------------cccCccccceECCCCCEEEEeccccceEEEeecccce
Confidence            99887765443332              2334578899999999887766 46789999987654

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=7.9e-24  Score=152.00  Aligned_cols=175  Identities=9%  Similarity=-0.018  Sum_probs=130.3

Q ss_pred             eeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCcccee---eeccccceeEEEEeCCC-CEEEEecCCCeE
Q psy10662         25 EALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRS---FVGHINDKNFVGLATDG-DYVACGSENNSL   99 (221)
Q Consensus        25 ~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~---~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v   99 (221)
                      +.++..++|++.|++|+|+| +.+|++|+.||+|++||++++.....   ..+|..+|.+++|+|++ .++++|+.|+.|
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v   81 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred             CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccce
Confidence            45667789999999999998 56699999999999999977654332   23689999999999875 478999999999


Q ss_pred             EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccc
Q psy10662        100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLER  179 (221)
Q Consensus       100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~  179 (221)
                      ++|++.........            ...+........+.++...+++++.++.+++||++.............      
T Consensus        82 ~~w~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~------  143 (342)
T d1yfqa_          82 LKVDLIGSPSFQAL------------TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN------  143 (342)
T ss_dssp             EEECSSSSSSEEEC------------BSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC------
T ss_pred             eeeecccccccccc------------cccccccccccccccccccccccccccccceeeccccccceeeecccc------
Confidence            99999877665432            122233344556677888999999999999999876554433321110      


Q ss_pred             cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        180 DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       180 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                         ............+.+++..+++++.|+.|++|++.+.+
T Consensus       144 ---~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~  181 (342)
T d1yfqa_         144 ---SNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE  181 (342)
T ss_dssp             ---SSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCT
T ss_pred             ---cccccceeeeeeeeccCCceeeecCCCcEEEEecccCc
Confidence               01122234556778889999999999999999997653

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.85  E-value=4.1e-18  Score=120.36  Aligned_cols=182  Identities=9%  Similarity=0.041  Sum_probs=141.7

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeeeccccceeEEE
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG   82 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~   82 (221)
                      ..++++.|++|.+||+. +++.++++.. ...+..++|+|++. | ++++.++.|++||+.+++.+..+..+. .+..+.
T Consensus         4 ~yV~~~~~~~v~v~D~~-t~~~~~~i~~-g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~   80 (301)
T d1l0qa2           4 AYIANSESDNISVIDVT-SNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA   80 (301)
T ss_dssp             EEEEETTTTEEEEEETT-TTEEEEEEEC-SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred             EEEEECCCCEEEEEECC-CCeEEEEEEC-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-cccccc
Confidence            35567889999999998 7888888874 45678999998654 5 577789999999999999988887655 468899


Q ss_pred             EeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE-EecCCCeEEEEEcC
Q psy10662         83 LATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA-CGSENNSLYIYYKG  160 (221)
Q Consensus        83 ~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~  160 (221)
                      |++++..+ +++..++.+.+|+..+++....+              .+...+..+.|+|+++.++ ++..++.+.+|+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~  146 (301)
T d1l0qa2          81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV--------------KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV  146 (301)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEETTTTEEEEEE--------------ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             cccccccccccccccceeeecccccceeeeec--------------cccccceEEEeecCCCeeeeeeccccceeeeecc
Confidence            99999865 55667889999999988876553              3445677899999998765 55668889999998


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEECCcc
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVIPIR  219 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~  219 (221)
                      +......+.                +...+..+.++|+++.+++++. ++.+.+|+....
T Consensus       147 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (301)
T d1l0qa2         147 TKAVINTVS----------------VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN  190 (301)
T ss_dssp             TTEEEEEEE----------------CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred             ccceeeecc----------------cCCCceEEEeeccccceeeecccccccccccccce
Confidence            887665553                2334678999999998877765 567777776544

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=8.8e-19  Score=125.64  Aligned_cols=104  Identities=11%  Similarity=0.117  Sum_probs=75.1

Q ss_pred             eEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeee---ccccc
Q psy10662          5 HLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFV---GHIND   77 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~---~~~~~   77 (221)
                      .+++++.|+.|++|++...+  +.++.+ .|.+.+..|+|+|++. | +++..|+.|++|++........+.   .+...
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~-~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~   84 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS   84 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEE-cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCC
Confidence            45778899999999997433  333333 4889999999998754 5 455568999999998765443332   23445


Q ss_pred             eeEEEEeCCCCEEEEecC-CCeEEEEECCCCee
Q psy10662         78 KNFVGLATDGDYVACGSE-NNSLYIYYKGLSKH  109 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~  109 (221)
                      +..++|+|+|+++++++. ++.+.+|+......
T Consensus        85 p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~  117 (333)
T d1ri6a_          85 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP  117 (333)
T ss_dssp             CSEEEECTTSSEEEEEETTTTEEEEEEEETTEE
T ss_pred             ceEEEEcCCCCEEeecccCCCceeeeccccccc
Confidence            778999999998887764 67888887654443

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.84  E-value=2e-19  Score=133.92  Aligned_cols=159  Identities=9%  Similarity=-0.059  Sum_probs=120.6

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         48 IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                      +++.+.+|+|.+||..+++.+..+..+. .+..++|+|||+++++++.|+.+.+||+.+++......        +....
T Consensus        35 ~v~~~d~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~--------i~~~~  105 (432)
T d1qksa2          35 SVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE--------IKIGS  105 (432)
T ss_dssp             EEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE--------EECCS
T ss_pred             EEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEE--------EecCC
Confidence            5789999999999999999999997664 58999999999999999999999999998776433221        11223


Q ss_pred             EeeCceEEEEEecCCCEE-EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EEe
Q psy10662        128 GHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VAA  205 (221)
Q Consensus       128 ~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~  205 (221)
                      +|...+.+.+|+|||++| +++..++.|++||..+++.+..+.........    ....+......+.++|+|..+ ++.
T Consensus       106 ~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~s~dg~~~~vs~  181 (432)
T d1qksa2         106 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE----QEYHPEPRVAAILASHYRPEFIVNV  181 (432)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT----CCEESCCCEEEEEECSSSSEEEEEE
T ss_pred             CCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccc----eeccCCCceeEEEECCCCCEEEEEE
Confidence            455666677889999976 67888999999999999888776532211111    111344556788999999876 556


Q ss_pred             cCCCeEEEEECCcc
Q psy10662        206 NSQGIIKIYVIPIR  219 (221)
Q Consensus       206 ~~dg~i~iw~~~~~  219 (221)
                      ..++.|.+|+..++
T Consensus       182 ~~~~~i~~~d~~~~  195 (432)
T d1qksa2         182 KETGKILLVDYTDL  195 (432)
T ss_dssp             TTTTEEEEEETTCS
T ss_pred             ccCCeEEEEEccCC
Confidence            67899999988754

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.81  E-value=2.8e-18  Score=124.18  Aligned_cols=201  Identities=7%  Similarity=-0.040  Sum_probs=135.9

Q ss_pred             CCCceEEEEe-----CCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEe----------cCCCcEEEEEcCC
Q psy10662          1 MNSCHLAFGS-----ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSA----------STDSQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~~~~-----~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~----------~~d~~v~~wd~~~   64 (221)
                      ||++++++..     .++.|.+||.. +++.+.++..+..+  .++|+|++. |+++          ..|+.|++||..+
T Consensus        11 pdg~~~~v~~~~~~~~~~~v~v~D~~-tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t   87 (355)
T d2bbkh_          11 PDARRVYVNDPAHFAAVTQQFVIDGE-AGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT   87 (355)
T ss_dssp             CCTTEEEEEECGGGCSSEEEEEEETT-TTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred             CCCCEEEEEecccCCCcCeEEEEECC-CCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCC
Confidence            7888887653     45679999998 78888888766544  799998655 5443          3478999999999


Q ss_pred             Cccceeeeccc-------cceeEEEEeCCCCEEEEe--cCCCeEEEEECCCCeeeEEEEeec------------------
Q psy10662         65 PNCLRSFVGHI-------NDKNFVGLATDGDYVACG--SENNSLYIYYKGLSKHMHAYRFDT------------------  117 (221)
Q Consensus        65 ~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~--~~d~~v~iwd~~~~~~~~~~~~~~------------------  117 (221)
                      ++.+..+..+.       .....++|+|++++++.+  +.+..+.+||..+++.+..+....                  
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  167 (355)
T d2bbkh_          88 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRD  167 (355)
T ss_dssp             CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETT
T ss_pred             CCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCC
Confidence            98877664332       224568999999977655  456789999999888766543100                  


Q ss_pred             -------------------------------------ccceeE---------------------eeEEE----------e
Q psy10662        118 -------------------------------------VRSMLE---------------------SSFVG----------H  129 (221)
Q Consensus       118 -------------------------------------~~~~~~---------------------~~~~~----------~  129 (221)
                                                           ......                     .....          .
T Consensus       168 g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (355)
T d2bbkh_         168 GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWR  247 (355)
T ss_dssp             SCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEE
T ss_pred             CCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeee
Confidence                                                 000000                     00000          0


Q ss_pred             eCceEEEEEecCCCEEEEecCC----------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC
Q psy10662        130 INDKNFVGLATDGDYVACGSEN----------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       130 ~~~v~~~~~~~~~~~l~~~~~d----------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  199 (221)
                      ......++++|++..++....+          ..|.+||..+++.+..+.                +...+.+++|+|||
T Consensus       248 p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~----------------~~~~~~~~a~spDG  311 (355)
T d2bbkh_         248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE----------------MGHEIDSINVSQDE  311 (355)
T ss_dssp             ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE----------------EEEEECEEEECCSS
T ss_pred             ccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec----------------CCCCEEEEEEcCCC
Confidence            0111236677777766654432          368899988887766553                23457899999999


Q ss_pred             c--EEEEecCCCeEEEEECCccc
Q psy10662        200 R--VLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       200 ~--~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +  ++++++.|+.|++||+++++
T Consensus       312 ~~~l~v~~~~d~~i~v~D~~tg~  334 (355)
T d2bbkh_         312 KPLLYALSTGDKTLYIHDAESGE  334 (355)
T ss_dssp             SCEEEEEETTTTEEEEEETTTCC
T ss_pred             CeEEEEEECCCCEEEEEECCCCC
Confidence            7  45667789999999999886

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.81  E-value=1.2e-18  Score=129.56  Aligned_cols=164  Identities=8%  Similarity=0.012  Sum_probs=119.9

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662         48 IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV  127 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
                      +++.+.||+|++||+.+++.+..+..+. .+..++|+|||+++++++.|+.|++||+.+++.......        ....
T Consensus        35 ~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i--------~~~~  105 (426)
T d1hzua2          35 SVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI--------KIGI  105 (426)
T ss_dssp             EEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE--------ECCS
T ss_pred             EEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEE--------eCCC
Confidence            5778899999999999999999998664 589999999999999999999999999998876544311        1223


Q ss_pred             EeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCceeeeeeec----------cccc--------------------
Q psy10662        128 GHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHMHAYRFDT----------VRSM--------------------  176 (221)
Q Consensus       128 ~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~----------~~~~--------------------  176 (221)
                      +|...+.+++|+|||++++++ ..++.+.+||..+......+....          ....                    
T Consensus       106 ~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~  185 (426)
T d1hzua2         106 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG  185 (426)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCC
Confidence            566667788899999987554 578999999998876654432110          0000                    


Q ss_pred             -cc---------ccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662        177 -LE---------RDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       177 -~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~  220 (221)
                       ..         ......++...+..+.|+|++++++++. .+..+.+++..+++
T Consensus       186 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~  240 (426)
T d1hzua2         186 KVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRR  240 (426)
T ss_dssp             EEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTE
T ss_pred             eEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeeccccc
Confidence             00         0001113455677899999999887765 57788899888764

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.81  E-value=5.1e-17  Score=118.33  Aligned_cols=202  Identities=7%  Similarity=-0.087  Sum_probs=129.0

Q ss_pred             CCCceEEEE-----eCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEe----------cCCCcEEEEEcCC
Q psy10662          1 MNSCHLAFG-----SADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSA----------STDSQLKLWNINK   64 (221)
Q Consensus         1 ~~~~~l~~~-----~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~----------~~d~~v~~wd~~~   64 (221)
                      |||+.+++.     +..+.|.+||.. +++.+..+..+..+  .++|+|++. ++++          ..++.|.+||..+
T Consensus        30 pdg~~~~~~~~~~~~~~~~v~v~D~~-tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t  106 (373)
T d2madh_          30 ADGRRSYINLPAHHSAIIQQWVLDAG-SGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT  106 (373)
T ss_pred             CCCCEEEEEcccccCCCceEEEEECC-CCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCC
Confidence            688888764     234579999987 78888888766543  789998654 5554          3467899999988


Q ss_pred             Cccceeeec-----------------------------------------------cccceeEEEEeCCCCE-EEEecCC
Q psy10662         65 PNCLRSFVG-----------------------------------------------HINDKNFVGLATDGDY-VACGSEN   96 (221)
Q Consensus        65 ~~~~~~~~~-----------------------------------------------~~~~v~~~~~~~~~~~-l~~~~~d   96 (221)
                      ++.+..+..                                               +.....++.++|+++. +++.+.|
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~~d  186 (373)
T d2madh_         107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQ  186 (373)
T ss_pred             CcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEeccceeEEEecCCCcEEEEEcCC
Confidence            765433211                                               1112345667777764 4677888


Q ss_pred             CeEEEEECCCCeeeEEEEe----------------------------------eccccee--EeeEEEe----------e
Q psy10662         97 NSLYIYYKGLSKHMHAYRF----------------------------------DTVRSML--ESSFVGH----------I  130 (221)
Q Consensus        97 ~~v~iwd~~~~~~~~~~~~----------------------------------~~~~~~~--~~~~~~~----------~  130 (221)
                      +.+.+||...++.......                                  +......  .......          .
T Consensus       187 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (373)
T d2madh_         187 GGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRP  266 (373)
T ss_pred             CeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeecc
Confidence            9999999877665544320                                  0000000  0000000          1


Q ss_pred             CceEEEEEecCCCEE----------EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662        131 NDKNFVGLATDGDYV----------ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR  200 (221)
Q Consensus       131 ~~v~~~~~~~~~~~l----------~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  200 (221)
                      .....++++|++..+          ++...++.+.+||..+++.+..+.                +...+..++|+|||+
T Consensus       267 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~----------------~~~~~~~~a~spDG~  330 (373)
T d2madh_         267 GGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS----------------LGHDVDAISVAQDGG  330 (373)
T ss_pred             CcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec----------------CCCCeeEEEECCCCC
Confidence            112234555555543          345556778899988887665552                445688999999998


Q ss_pred             E--EEEecCCCeEEEEECCcccC
Q psy10662        201 V--LVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       201 ~--l~~~~~dg~i~iw~~~~~~l  221 (221)
                      .  +++++.|+.|++||+.++++
T Consensus       331 ~~l~vt~~~d~~v~v~D~~tg~~  353 (373)
T d2madh_         331 PDLYALSAGTEVLHIYDAGAGDQ  353 (373)
T ss_pred             EEEEEEeCCCCeEEEEECCCCCE
Confidence            4  46788999999999998863

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.78  E-value=5.2e-18  Score=121.54  Aligned_cols=149  Identities=11%  Similarity=0.083  Sum_probs=114.5

Q ss_pred             CcEEEecCCCcEEEEEcCCCccceeeecc--ccceeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEeeccccee
Q psy10662         46 EDIVSASTDSQLKLWNINKPNCLRSFVGH--INDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVRSML  122 (221)
Q Consensus        46 ~~l~s~~~d~~v~~wd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  122 (221)
                      .++++++.|++|++||+++++.+..+..+  ...+.+++|+|||+++ ++++.++.|.+||+.+++.+..+.....    
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~----   77 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP----   77 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT----
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCC----
Confidence            46899999999999999999998888543  3457899999999986 5677899999999999998876532110    


Q ss_pred             EeeEEEeeCceEEEEEecCCCEEEEecC------------CCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662        123 ESSFVGHINDKNFVGLATDGDYVACGSE------------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV  190 (221)
Q Consensus       123 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  190 (221)
                          ..+...+..++|+|++++++++..            +..+.+||..+......+.                +...+
T Consensus        78 ----~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----------------~~~~~  137 (337)
T d1pbyb_          78 ----EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE----------------APRQI  137 (337)
T ss_dssp             ----TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE----------------CCSSC
T ss_pred             ----cccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecc----------------ccCCc
Confidence                112334557899999999988764            5678888888776655543                23456


Q ss_pred             eEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        191 SAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       191 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ..++|+|+|+++++++.+  +.+||..+++
T Consensus       138 ~~~~~s~dg~~l~~~~~~--~~~~d~~~~~  165 (337)
T d1pbyb_         138 TMLAWARDGSKLYGLGRD--LHVMDPEAGT  165 (337)
T ss_dssp             CCEEECTTSSCEEEESSS--EEEEETTTTE
T ss_pred             eEEEEcCCCCEEEEEcCC--cceeeeecCc
Confidence            789999999999998755  6789987754

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=5.7e-16  Score=110.76  Aligned_cols=149  Identities=11%  Similarity=0.114  Sum_probs=106.8

Q ss_pred             EEEecCCCcEEEEEcCCCccceee--eccccceeEEEEeCCCCEEE-EecCCCeEEEEECCCCeeeEEEEeecccceeEe
Q psy10662         48 IVSASTDSQLKLWNINKPNCLRSF--VGHINDKNFVGLATDGDYVA-CGSENNSLYIYYKGLSKHMHAYRFDTVRSMLES  124 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~  124 (221)
                      +++++.|++|++|++.....+..+  ..|.+.+..++|+|||++|+ ++..|+.|.+|++.........          .
T Consensus         7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~----------~   76 (333)
T d1ri6a_           7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF----------A   76 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE----------E
T ss_pred             EEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEE----------e
Confidence            578889999999999765433322  35778899999999999885 4556899999998765433222          1


Q ss_pred             eEEEeeCceEEEEEecCCCEEEEecC-CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE
Q psy10662        125 SFVGHINDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV  203 (221)
Q Consensus       125 ~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  203 (221)
                      ....+...+..++|+|+|++|++++. ++.+.+|+............             ..+...+.++.++|++++++
T Consensus        77 ~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~-------------~~~~~~~~~v~~s~d~~~~~  143 (333)
T d1ri6a_          77 AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV-------------VEGLDGCHSANISPDNRTLW  143 (333)
T ss_dssp             EEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE-------------ECCCTTBCCCEECTTSSEEE
T ss_pred             eecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccc-------------cCCCccceEEEeeecceeee
Confidence            11233455778999999999988875 67899998766554333321             13445577889999999888


Q ss_pred             Eec-CCCeEEEEECCcc
Q psy10662        204 AAN-SQGIIKIYVIPIR  219 (221)
Q Consensus       204 ~~~-~dg~i~iw~~~~~  219 (221)
                      .++ .+..|.+|+....
T Consensus       144 ~~~~~~~~i~~~~~~~~  160 (333)
T d1ri6a_         144 VPALKQDRICLFTVSDD  160 (333)
T ss_dssp             EEEGGGTEEEEEEECTT
T ss_pred             ccccccceeeEEEeccC
Confidence            876 4667999987653

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.69  E-value=3.1e-15  Score=108.86  Aligned_cols=103  Identities=4%  Similarity=-0.176  Sum_probs=75.2

Q ss_pred             EeCCCe--EEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEe----------cCCCcEEEEEcCCCccceeeeccc
Q psy10662          9 GSADHC--VHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSA----------STDSQLKLWNINKPNCLRSFVGHI   75 (221)
Q Consensus         9 ~~~dg~--i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~----------~~d~~v~~wd~~~~~~~~~~~~~~   75 (221)
                      ...+|.  |.+||.. +++.+..+..+..+  .++|+|++. +++.          +.|+.|.+||..+++.+..+..+.
T Consensus        40 ~~~~g~~~~~~~d~~-~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~  116 (368)
T d1mdah_          40 AYFAGTTENWVSCAG-CGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD  116 (368)
T ss_dssp             TTTCSSEEEEEEETT-TTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT
T ss_pred             ccCCCcceEEEEeCC-CCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCc
Confidence            344454  6666876 77888888766654  588998655 5543          347889999999998887765432


Q ss_pred             c-------ceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEE
Q psy10662         76 N-------DKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        76 ~-------~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~  114 (221)
                      .       ....++|+|||++++++. .++.+.+||+.+++....+.
T Consensus       117 ~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~  163 (368)
T d1mdah_         117 APRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTK  163 (368)
T ss_dssp             SCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEE
T ss_pred             cceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEee
Confidence            2       235689999999887665 57899999999988877654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.68  E-value=5.6e-16  Score=111.18  Aligned_cols=158  Identities=11%  Similarity=0.017  Sum_probs=112.1

Q ss_pred             EEEec-CCcEEEecCCCcEEEEEcCCCccceeee-ccccceeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEee
Q psy10662         40 VKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFV-GHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFD  116 (221)
Q Consensus        40 ~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~  116 (221)
                      ++|++ +.++++++.+++|.+||+.+++.+..+. .+...+.+++|+|||+++ ++++.++.|.+||+.+++.+..+...
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            35676 4568899999999999999999988876 345568899999999986 56678899999999999988765321


Q ss_pred             cccceeEeeEEEeeCceEEEEEecCCCEEEEec------------CCCeEEEEEcCCCCceeeeeeeccccccccccccc
Q psy10662        117 TVRSMLESSFVGHINDKNFVGLATDGDYVACGS------------ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED  184 (221)
Q Consensus       117 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (221)
                      ...       ..+...+..++|+|||+++++++            .++.+.+|+..+++....+...             
T Consensus        82 ~~~-------~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------------  141 (346)
T d1jmxb_          82 SVP-------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-------------  141 (346)
T ss_dssp             CST-------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-------------
T ss_pred             ccc-------cccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEee-------------
Confidence            111       12223456789999999988775            3667888887766544333211             


Q ss_pred             ccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        185 DTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       185 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      .....+..+.+++++++++++   +.+.+|++.+++
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  174 (346)
T d1jmxb_         142 PMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGK  174 (346)
T ss_dssp             ECCSSCCCEEECTTSCEEEES---SSEEEECTTTCC
T ss_pred             eccCceEEEEecCCCEEEEeC---CcceEEEccCCC
Confidence            112345567777887766653   457888887654

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.55  E-value=7.9e-13  Score=95.09  Aligned_cols=167  Identities=9%  Similarity=0.010  Sum_probs=109.6

Q ss_pred             CCCceEEEE----------eCCCeEEEEEecCCceeeEEEEeccC-------ceEEEEEecCCc-EEEe--cCCCcEEEE
Q psy10662          1 MNSCHLAFG----------SADHCVHYYDLRNTKEALAVFKGHRK-------AVSYVKFLNKED-IVSA--STDSQLKLW   60 (221)
Q Consensus         1 ~~~~~l~~~----------~~dg~i~i~~~~~~~~~~~~~~~~~~-------~i~~~~~~~~~~-l~s~--~~d~~v~~w   60 (221)
                      |||++|+++          ..++.|++||+. +++.+..+..+..       ....++|+|++. ++.+  +.+..+.+|
T Consensus        56 pDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~  134 (355)
T d2bbkh_          56 DDGSFIAHASTVFSRIARGERTDYVEVFDPV-TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVV  134 (355)
T ss_dssp             TTSSCEEEEEEEEEETTEEEEEEEEEEECTT-TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEE
T ss_pred             CCCCEEEEEeCCCccccccCCCCEEEEEECC-CCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeee
Confidence            788888764          347899999998 6777777665432       235678997544 4443  456789999


Q ss_pred             EcCCCccceeeecc---------------------------------------------ccceeEEEEeCCCCEEEEecC
Q psy10662         61 NINKPNCLRSFVGH---------------------------------------------INDKNFVGLATDGDYVACGSE   95 (221)
Q Consensus        61 d~~~~~~~~~~~~~---------------------------------------------~~~v~~~~~~~~~~~l~~~~~   95 (221)
                      +..+++.+..+..+                                             ...+....+.+++..++.++.
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (355)
T d2bbkh_         135 DLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY  214 (355)
T ss_dssp             ETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT
T ss_pred             ecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecC
Confidence            99877654433211                                             111223345556667777888


Q ss_pred             CCeEEEEECCCCeeeEE--E-------------------------------------------------EeecccceeEe
Q psy10662         96 NNSLYIYYKGLSKHMHA--Y-------------------------------------------------RFDTVRSMLES  124 (221)
Q Consensus        96 d~~v~iwd~~~~~~~~~--~-------------------------------------------------~~~~~~~~~~~  124 (221)
                      ++.+.+|++..++....  .                                                 .++....+.+.
T Consensus       215 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~  294 (355)
T d2bbkh_         215 TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA  294 (355)
T ss_dssp             TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE
T ss_pred             CCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEE
Confidence            99999999876542110  0                                                 02333333334


Q ss_pred             eEEEeeCceEEEEEecCCC--EEEEecCCCeEEEEEcCCCCceeeee
Q psy10662        125 SFVGHINDKNFVGLATDGD--YVACGSENNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       125 ~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~~~d~~~~~~~~~~~  169 (221)
                      .+. +...+.+++|+|||+  ++++++.|+.|++||+++++.+..+.
T Consensus       295 ~~~-~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~  340 (355)
T d2bbkh_         295 KFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN  340 (355)
T ss_dssp             EEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred             Eec-CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEe
Confidence            333 334578899999998  45677889999999999998877663

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.52  E-value=6.5e-12  Score=90.88  Aligned_cols=153  Identities=12%  Similarity=0.011  Sum_probs=104.1

Q ss_pred             CCc-eEEEEeCCCeEEEEEecCCceeeEEEEecc------CceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee--e
Q psy10662          2 NSC-HLAFGSADHCVHYYDLRNTKEALAVFKGHR------KAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF--V   72 (221)
Q Consensus         2 ~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~--~   72 (221)
                      +++ .+++.+.|+.+.+|+.. ..........+.      .....+.+.+++.++..+.++.+.+|+..........  .
T Consensus       175 ~g~~~~v~~~~dg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  253 (373)
T d2madh_         175 GAPSTFYLLCAQGGLAKTDHA-GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPID  253 (373)
T ss_pred             CCCcEEEEEcCCCeEEEEEcC-CceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeec
Confidence            444 45788899999999987 555554443322      1233445556777888889999999998765432211  1


Q ss_pred             cc----------ccceeEEEEeCCCCEE----------EEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc
Q psy10662         73 GH----------INDKNFVGLATDGDYV----------ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND  132 (221)
Q Consensus        73 ~~----------~~~v~~~~~~~~~~~l----------~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (221)
                      .+          ......+++++++..+          ++...++.+.+||..+++.+..+              .+...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~--------------~~~~~  319 (373)
T d2madh_         254 ALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI--------------SLGHD  319 (373)
T ss_pred             cccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEe--------------cCCCC
Confidence            11          1223445556655543          44556677889998888876653              34566


Q ss_pred             eEEEEEecCCC--EEEEecCCCeEEEEEcCCCCceeeee
Q psy10662        133 KNFVGLATDGD--YVACGSENNSLYIYYKGLSKHMHAYR  169 (221)
Q Consensus       133 v~~~~~~~~~~--~l~~~~~d~~i~~~d~~~~~~~~~~~  169 (221)
                      +..++|+|||+  ++++++.|+.|++||+.+++.+..+.
T Consensus       320 ~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~  358 (373)
T d2madh_         320 VDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV  358 (373)
T ss_pred             eeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEC
Confidence            88999999998  45688999999999999999877764

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.49  E-value=9.3e-12  Score=91.14  Aligned_cols=198  Identities=9%  Similarity=-0.010  Sum_probs=115.9

Q ss_pred             eEEEEeCCCeEEEEEecCCceeeEEEEe------------------------------ccCceEEEEEecCC-cE-EEec
Q psy10662          5 HLAFGSADHCVHYYDLRNTKEALAVFKG------------------------------HRKAVSYVKFLNKE-DI-VSAS   52 (221)
Q Consensus         5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~------------------------------~~~~i~~~~~~~~~-~l-~s~~   52 (221)
                      .+++|+.+|.|++|++. .++.++.+..                              |........+.|++ +| ++..
T Consensus        13 ~f~Sgg~sG~V~V~dlp-S~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~   91 (441)
T d1qnia2          13 GFWSGGHQGEVRVLGVP-SMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDK   91 (441)
T ss_dssp             EEEECBTTCCEEEEEET-TTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEET
T ss_pred             EEEeCCCCCcEEEEeCC-CCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcC
Confidence            47788899999999998 6766666532                              11122333334544 45 4556


Q ss_pred             CCCcEEEEEcCCCccceeee-ccccceeEEEEeCCCC--EEEEecCCCe-----------------EEEEECCCCeeeEE
Q psy10662         53 TDSQLKLWNINKPNCLRSFV-GHINDKNFVGLATDGD--YVACGSENNS-----------------LYIYYKGLSKHMHA  112 (221)
Q Consensus        53 ~d~~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~--~l~~~~~d~~-----------------v~iwd~~~~~~~~~  112 (221)
                      .++.|.++|+.+.+....+. .+...+..++|+|+++  |++..+++..                 +..+|..+.+...+
T Consensus        92 ~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~q  171 (441)
T d1qnia2          92 ANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQ  171 (441)
T ss_dssp             TTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEE
T ss_pred             CCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEE
Confidence            78999999999998877654 3456789999999998  5555544431                 22344444443332


Q ss_pred             EEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-eEEEEEcCCCCceeeeeeec---------cc--------
Q psy10662        113 YRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-SLYIYYKGLSKHMHAYRFDT---------VR--------  174 (221)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~~~~~~~~~~~~---------~~--------  174 (221)
                                   .. -...+..++|+|+|+++++.+.+. .+..++..+......+....         .+        
T Consensus       172 -------------I~-v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~  237 (441)
T d1qnia2         172 -------------VI-VDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDS  237 (441)
T ss_dssp             -------------EE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTC
T ss_pred             -------------Ee-cCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCC
Confidence                         22 234567899999999888776542 22222222221111110000         00        


Q ss_pred             --------ccccccccccccccceeEEEEcCCCcEEEE-ecCCCeEEEEECCc
Q psy10662        175 --------SMLERDRNEDDTNEFVSAVCWRQLSRVLVA-ANSQGIIKIYVIPI  218 (221)
Q Consensus       175 --------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iw~~~~  218 (221)
                              ........... ......+.++|||+++++ +..++++.+||+.+
T Consensus       238 ~v~vvd~~~~~~v~~~IPv-gksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k  289 (441)
T d1qnia2         238 KVPVVDGRGESEFTRYIPV-PKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDK  289 (441)
T ss_dssp             CCCEEECSSSCSSEEEECC-BSSCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred             CcEEEEcccCCceEEEEeC-CCCccCceECCCCCEEEEeCCcCCcEEEEEeeh
Confidence                    00000001111 123467999999998865 55799999999864

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.48  E-value=2.4e-13  Score=101.84  Aligned_cols=162  Identities=13%  Similarity=0.139  Sum_probs=109.7

Q ss_pred             EEEEEecCCcEEEecCCCcEEEEEcCCCccceeee-----ccccceeEEEEeCCCCEEEEecC---------CCeEEEEE
Q psy10662         38 SYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV-----GHINDKNFVGLATDGDYVACGSE---------NNSLYIYY  103 (221)
Q Consensus        38 ~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~---------d~~v~iwd  103 (221)
                      ..+.|.+++.++.- .|+.+.+||+.+++....+.     .|...|.++.|+|||++|+.++.         ++.+.+||
T Consensus        20 ~~~~W~~d~~~~~~-~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          20 YSLRWISDHEYLYK-QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCCEECSSSEEEEE-SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             cCCEeCCCCEEEEE-cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            35778887776653 57889999999988765443     34567999999999999887743         56788999


Q ss_pred             CCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccc-
Q psy10662        104 KGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRN-  182 (221)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-  182 (221)
                      +.+++..              .+..+...+..+.|+|||+.||.. .++.+++|+...++................... 
T Consensus        99 ~~~~~~~--------------~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~  163 (470)
T d2bgra1          99 LNKRQLI--------------TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDW  163 (470)
T ss_dssp             TTTTEEC--------------CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCH
T ss_pred             CCCCccc--------------ccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccce
Confidence            9887653              235677788999999999999985 567899999888765543321110000000000 


Q ss_pred             --ccccccceeEEEEcCCCcEEEEecCCCe-EEEEE
Q psy10662        183 --EDDTNEFVSAVCWRQLSRVLVAANSQGI-IKIYV  215 (221)
Q Consensus       183 --~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iw~  215 (221)
                        ..........+.|||||++|+....|.. +..|.
T Consensus       164 ~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~  199 (470)
T d2bgra1         164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIE  199 (470)
T ss_dssp             HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEE
T ss_pred             eeeeeecCCccccEECCCCCccceeEecCCcCceEE
Confidence              0012233566889999999999875433 44443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.43  E-value=4e-12  Score=92.16  Aligned_cols=69  Identities=12%  Similarity=-0.018  Sum_probs=49.4

Q ss_pred             CCCceEEEEe----------CCCeEEEEEecCCceeeEEEEeccC-------ceEEEEEecCC-cEEEec-CCCcEEEEE
Q psy10662          1 MNSCHLAFGS----------ADHCVHYYDLRNTKEALAVFKGHRK-------AVSYVKFLNKE-DIVSAS-TDSQLKLWN   61 (221)
Q Consensus         1 ~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~~~~-------~i~~~~~~~~~-~l~s~~-~d~~v~~wd   61 (221)
                      |||+.|++.+          .|+.|.+||.. +.+++..+..+..       ....++|+|++ +++.+. .++.+.+||
T Consensus        74 pDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~-t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d  152 (368)
T d1mdah_          74 HSGSDFALASTSFARSAKGKRTDYVEVFDPV-TFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLS  152 (368)
T ss_dssp             TTSSCEEEEEEEETTTTSSSEEEEEEEECTT-TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEE
T ss_pred             CCCCEEEEEcccCccccccccCCeEEEEECC-CCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEE
Confidence            6888888754          46789999998 7777777765433       23468999855 455554 579999999


Q ss_pred             cCCCcccee
Q psy10662         62 INKPNCLRS   70 (221)
Q Consensus        62 ~~~~~~~~~   70 (221)
                      +.+++....
T Consensus       153 ~~~~~~~~~  161 (368)
T d1mdah_         153 VPGASDDQL  161 (368)
T ss_dssp             ETTTEEEEE
T ss_pred             CCCCcEeEE
Confidence            887655443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.41  E-value=4.3e-12  Score=94.95  Aligned_cols=152  Identities=9%  Similarity=0.084  Sum_probs=100.9

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEecCCc-EEEec---------CCCcEEEEEcCCC
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLNKED-IVSAS---------TDSQLKLWNINKP   65 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~-l~s~~---------~d~~v~~wd~~~~   65 (221)
                      +|++++..  .++.+.+||+. +++....+..     |...|.++.|+|++. |+.++         .++.+.+||+.++
T Consensus        26 ~d~~~~~~--~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~  102 (470)
T d2bgra1          26 SDHEYLYK--QENNILVFNAE-YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR  102 (470)
T ss_dssp             SSSEEEEE--SSSCEEEEETT-TCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred             CCCEEEEE--cCCcEEEEECC-CCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCC
Confidence            35555543  57889999998 5555444443     346799999998655 56553         3577899999988


Q ss_pred             ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeE------EEeeCceEEEEEe
Q psy10662         66 NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSF------VGHINDKNFVGLA  139 (221)
Q Consensus        66 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~  139 (221)
                      +. ..+..+...+....|+|||+.+|.. .++.+.+|+..+++..+......... .....      ....+....+.|+
T Consensus       103 ~~-~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~-~~~g~~d~~~~~~~~~~~~~~~wS  179 (470)
T d2bgra1         103 QL-ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDI-IYNGITDWVYEEEVFSAYSALWWS  179 (470)
T ss_dssp             EE-CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTT-EEESBCCHHHHHHTSSSSBCEEEC
T ss_pred             cc-cccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCc-ccccccceeeeeeecCCccccEEC
Confidence            75 4466788889999999999999886 56679999998887654321110000 00000      0112334567899


Q ss_pred             cCCCEEEEecCCCe-EEEEE
Q psy10662        140 TDGDYVACGSENNS-LYIYY  158 (221)
Q Consensus       140 ~~~~~l~~~~~d~~-i~~~d  158 (221)
                      |||+.|+....|.. +..|.
T Consensus       180 PDGk~ia~~~~d~~~v~~~~  199 (470)
T d2bgra1         180 PNGTFLAYAQFNDTEVPLIE  199 (470)
T ss_dssp             TTSSEEEEEEEECTTCCEEE
T ss_pred             CCCCccceeEecCCcCceEE
Confidence            99999998775533 44443

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.41  E-value=2.4e-11  Score=89.00  Aligned_cols=210  Identities=8%  Similarity=-0.002  Sum_probs=124.7

Q ss_pred             CCCceEEEE-eCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEecCCc--EEEecCCCc------------------EE
Q psy10662          1 MNSCHLAFG-SADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKED--IVSASTDSQ------------------LK   58 (221)
Q Consensus         1 ~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~--l~s~~~d~~------------------v~   58 (221)
                      |||++|.+. ..++.|.++|+. +++..+.+.- +...+..++|+|++.  ++++..+..                  +.
T Consensus        81 pDGr~lfV~d~~~~rVavIDl~-t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~  159 (441)
T d1qnia2          81 YDGKYLFINDKANTRVARIRLD-IMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFT  159 (441)
T ss_dssp             EEEEEEEEEETTTTEEEEEETT-TTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEE
T ss_pred             CCCCEEEEEcCCCCEEEEEECC-CCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEE
Confidence            578888555 467899999998 7777776653 567799999997433  444433333                  34


Q ss_pred             EEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCC-eEEEEECCCCeeeEEEE-----------------------
Q psy10662         59 LWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENN-SLYIYYKGLSKHMHAYR-----------------------  114 (221)
Q Consensus        59 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~iwd~~~~~~~~~~~-----------------------  114 (221)
                      .+|..+.+....+.. ......+.++|+|+++++.+.+. .+..++..+.+....+.                       
T Consensus       160 ~iD~~t~~v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~  238 (441)
T d1qnia2         160 AIDAETMDVAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSK  238 (441)
T ss_dssp             EEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred             eecCccceeeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCC
Confidence            577777776666543 34578899999999887776542 22222221111111110                       


Q ss_pred             ----eecccceeEeeEEEeeCceEEEEEecCCCEEE-EecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662        115 ----FDTVRSMLESSFVGHINDKNFVGLATDGDYVA-CGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF  189 (221)
Q Consensus       115 ----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (221)
                          ........+..+... .....++++|||++++ ++..+++|.+||+++......-..+    ....+.......-.
T Consensus       239 v~vvd~~~~~~v~~~IPvg-ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~----~~~~~~~~~~~glg  313 (441)
T d1qnia2         239 VPVVDGRGESEFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIE----LRDTIVAEPELGLG  313 (441)
T ss_dssp             CCEEECSSSCSSEEEECCB-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSC----GGGGEEECCBCCSC
T ss_pred             cEEEEcccCCceEEEEeCC-CCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCC----cceEEEeecccccC
Confidence                011111222233332 3356799999999865 5678999999998653221000000    00000000011122


Q ss_pred             eeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        190 VSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ....+|+++|+.+.+...|.+|..|++.
T Consensus       314 plh~~fd~~g~~yts~~~ds~v~kw~~~  341 (441)
T d1qnia2         314 PLHTTFDGRGNAYTTLFIDSQVCKWNIA  341 (441)
T ss_dssp             EEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred             cccceecCCceEEEcccccceEEEeccc
Confidence            3456899999999999999999999974

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.24  E-value=7.7e-09  Score=72.63  Aligned_cols=190  Identities=9%  Similarity=0.019  Sum_probs=118.3

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccce-eee--cccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLR-SFV--GHIN   76 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~-~~~--~~~~   76 (221)
                      |||+++++...++.|..|+..  ++ ...+......+.+++|.+++. +++...++.+..++........ .+.  ....
T Consensus        37 pdG~l~vt~~~~~~I~~i~p~--g~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (302)
T d2p4oa1          37 PDGTIFVTNHEVGEIVSITPD--GN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAI  113 (302)
T ss_dssp             TTSCEEEEETTTTEEEEECTT--CC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCS
T ss_pred             CCCCEEEEeCCCCEEEEEeCC--CC-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccCCcc
Confidence            689999998889988877754  33 334555678899999997655 5566677888888775433221 121  2334


Q ss_pred             ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------e--------ecccceeE-----
Q psy10662         77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------F--------DTVRSMLE-----  123 (221)
Q Consensus        77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------~--------~~~~~~~~-----  123 (221)
                      ..+.+.+.++++++++-+.++.+..+|...+.......                    +        +.......     
T Consensus       114 ~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~i~~~~~~  193 (302)
T d2p4oa1         114 FLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVD  193 (302)
T ss_dssp             CEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBC
T ss_pred             ccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeeecCCCCeEEecccc
Confidence            57889999999988888888888888876654322111                    0        00000000     


Q ss_pred             -------eeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE-
Q psy10662        124 -------SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW-  195 (221)
Q Consensus       124 -------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-  195 (221)
                             ............++++++|++.++...++.|..++.... .....             .....-...++++| 
T Consensus       194 ~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~-~~~~~-------------~~~~~~~~pt~vafg  259 (302)
T d2p4oa1         194 STDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS-TTIIA-------------QAEQGVIGSTAVAFG  259 (302)
T ss_dssp             TTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC-EEEEE-------------CGGGTCTTEEEEEEC
T ss_pred             ccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCC-EEEEE-------------ecCCCCCCceEEEEc
Confidence                   011112233456899999998888888888888865422 11111             01112234688999 


Q ss_pred             --cCCCcEEEEecC
Q psy10662        196 --RQLSRVLVAANS  207 (221)
Q Consensus       196 --~~~~~~l~~~~~  207 (221)
                        ++|++.|+.++.
T Consensus       260 ~~~~D~~~Lyvtt~  273 (302)
T d2p4oa1         260 QTEGDCTAIYVVTN  273 (302)
T ss_dssp             CSTTTTTEEEEEEC
T ss_pred             CCCCCCCEEEEECC
Confidence              678888876543

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.22  E-value=1.4e-08  Score=71.65  Aligned_cols=192  Identities=7%  Similarity=0.041  Sum_probs=113.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEEEEEecCCcEEEecC----------------CCcEEEE
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSYVKFLNKEDIVSAST----------------DSQLKLW   60 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~l~s~~~----------------d~~v~~w   60 (221)
                      +++++|+++...+.|..++.+ ............+    ..+.+++.+++.|..+..                .|.|..+
T Consensus        80 ~dg~~l~vad~~~~i~~~~~~-g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~  158 (314)
T d1pjxa_          80 RDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCF  158 (314)
T ss_dssp             SSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred             CCCCEEEEEECCCeEEEEeCC-CcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEE
Confidence            467777777777778888876 3221111111111    256788888666554422                2234444


Q ss_pred             EcCCCccceeeeccccceeEEEEeCCCC-----EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEE-eeCceE
Q psy10662         61 NINKPNCLRSFVGHINDKNFVGLATDGD-----YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG-HINDKN  134 (221)
Q Consensus        61 d~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~  134 (221)
                      +. .++... +...-...+.++|+|+++     ++++-+..+.|..||+.....+...       +....+.. ......
T Consensus       159 ~~-dg~~~~-~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~-------~~~~~~~~~~~~~pd  229 (314)
T d1pjxa_         159 TT-DGQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK-------KVWGHIPGTHEGGAD  229 (314)
T ss_dssp             CT-TSCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE-------EEEEECCCCSSCEEE
T ss_pred             ee-cCceeE-eeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCcccccee-------eEEEEccccccccce
Confidence            33 233222 222233346789988764     4556677888888886543322211       00011111 122356


Q ss_pred             EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE-EEEecCCCeEEE
Q psy10662        135 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV-LVAANSQGIIKI  213 (221)
Q Consensus       135 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~i  213 (221)
                      .+++.++|++.++....+.|.+||.+.+.....+.               ......++++|.|+++. +++.+.+|.|..
T Consensus       230 GiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~---------------~p~~~~t~~afg~d~~~lyVt~~~~g~i~~  294 (314)
T d1pjxa_         230 GMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR---------------CPFEKPSNLHFKPQTKTIFVTEHENNAVWK  294 (314)
T ss_dssp             EEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE---------------CSSSCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             eeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEE---------------CCCCCEEEEEEeCCCCEEEEEECCCCcEEE
Confidence            79999999988888788999999987666544442               12345788999999874 466667898888


Q ss_pred             EECC
Q psy10662        214 YVIP  217 (221)
Q Consensus       214 w~~~  217 (221)
                      .+++
T Consensus       295 ~~~~  298 (314)
T d1pjxa_         295 FEWQ  298 (314)
T ss_dssp             EECS
T ss_pred             EECC
Confidence            8875

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.22  E-value=7.3e-09  Score=74.74  Aligned_cols=175  Identities=14%  Similarity=0.141  Sum_probs=101.1

Q ss_pred             ceEEEEEecCCc-EEEec-CCCcEEEEEcCCCccce---ee--eccccceeEEEEeCCCCEEE-EecCCCeEEEEECCCC
Q psy10662         36 AVSYVKFLNKED-IVSAS-TDSQLKLWNINKPNCLR---SF--VGHINDKNFVGLATDGDYVA-CGSENNSLYIYYKGLS  107 (221)
Q Consensus        36 ~i~~~~~~~~~~-l~s~~-~d~~v~~wd~~~~~~~~---~~--~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~  107 (221)
                      .+.++.|+|++. ++++. ....|.+|+......+.   ..  .........++|+|+++++. +...++.|.+|++...
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~  225 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA  225 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCC
Confidence            478999998665 55543 35578888765432221   11  12234678999999999874 4556889999998765


Q ss_pred             eeeEEEEee---ccc---ceeEeeEEEeeCceEEEEEecCCCEEEEecC------CCeEEEEEcCCCCceeeeeeecccc
Q psy10662        108 KHMHAYRFD---TVR---SMLESSFVGHINDKNFVGLATDGDYVACGSE------NNSLYIYYKGLSKHMHAYRFDTVRS  175 (221)
Q Consensus       108 ~~~~~~~~~---~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~  175 (221)
                      +........   ...   ................+.++|+|++|+++..      .+.|..|++.....+.....     
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~-----  300 (365)
T d1jofa_         226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF-----  300 (365)
T ss_dssp             TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEE-----
T ss_pred             CceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeE-----
Confidence            433221100   000   0000000112223457889999999987743      23477777655433221110     


Q ss_pred             cccccccccccccceeEEEEcC-CCcEEEEec-CCCeEEEEECCcc
Q psy10662        176 MLERDRNEDDTNEFVSAVCWRQ-LSRVLVAAN-SQGIIKIYVIPIR  219 (221)
Q Consensus       176 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iw~~~~~  219 (221)
                          .............++++| +|++|+++. .++.|.+|++...
T Consensus       301 ----~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         301 ----LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             ----EEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             ----eeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence                000011223456799998 899887765 6899999987543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.14  E-value=1.7e-07  Score=66.13  Aligned_cols=195  Identities=12%  Similarity=0.050  Sum_probs=113.4

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecC-----CCcEEEEEcCCCccceeeec--
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAST-----DSQLKLWNINKPNCLRSFVG--   73 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~-----d~~v~~wd~~~~~~~~~~~~--   73 (221)
                      ++|++.++-...+.|..|+.+ .+.....+.........+++.+++.|+.+..     .+.+...+............  
T Consensus        49 ~~G~Ly~~D~~~g~I~ri~p~-g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  127 (319)
T d2dg1a1          49 RQGQLFLLDVFEGNIFKINPE-TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS  127 (319)
T ss_dssp             TTSCEEEEETTTCEEEEECTT-TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS
T ss_pred             CCCCEEEEECCCCEEEEEECC-CCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeeccCCC
Confidence            467766666677777777766 4444444444566788999998777665532     23344445444433322221  


Q ss_pred             cccceeEEEEeCCCCEEEEecCC------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-E
Q psy10662         74 HINDKNFVGLATDGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-A  146 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~  146 (221)
                      .....+.+++.++|.+.++....      +.+..++..... +             ..+...-...+.++|+|+++.| +
T Consensus       128 ~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-~-------------~~~~~~~~~pnGia~s~dg~~lyv  193 (319)
T d2dg1a1         128 TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-V-------------TPIIQNISVANGIALSTDEKVLWV  193 (319)
T ss_dssp             SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-E-------------EEEEEEESSEEEEEECTTSSEEEE
T ss_pred             cccCCcceeEEeccceeecccccccccCcceeEEEecccce-e-------------EEEeeccceeeeeeeccccceEEE
Confidence            12346788999999877664321      223333332211 1             1122334456789999999865 5


Q ss_pred             EecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        147 CGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       147 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      +-+..+.|..|++.............   ..    ...........++++++|++.++....+.|.+++-.
T Consensus       194 ad~~~~~I~~~d~~~~g~~~~~~~~~---~~----~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~  257 (319)
T d2dg1a1         194 TETTANRLHRIALEDDGVTIQPFGAT---IP----YYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR  257 (319)
T ss_dssp             EEGGGTEEEEEEECTTSSSEEEEEEE---EE----EECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred             ecccCCceEEEEEcCCCceeccccce---ee----eccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCC
Confidence            55667899999986543221110000   00    000111234679999999988888888999999853

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.13  E-value=9.1e-09  Score=70.66  Aligned_cols=186  Identities=9%  Similarity=-0.000  Sum_probs=111.4

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDKNF   80 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~   80 (221)
                      +++++++....+.+++++-. ....+.... ......++++.+++.++ +-..+..+..++...................
T Consensus        67 ~g~i~v~d~~~~~i~~~~~~-~~~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  144 (260)
T d1rwia_          67 AGTVYVTDFNNRVVTLAAGS-NNQTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDG  144 (260)
T ss_dssp             TCCEEEEETTTEEEEECTTC-SCCEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCE
T ss_pred             CCCEEEeeeeeceeeeeeec-cceeeeeee-eeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcce
Confidence            45555555444444444322 222222211 22457889888765544 4444556666665443322211122334578


Q ss_pred             EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662         81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG  160 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  160 (221)
                      +++.|+++++++...++.|..+|.........             ..........++++++|+++++....+.|..++..
T Consensus       145 i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~-------------~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~  211 (260)
T d1rwia_         145 VAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL-------------PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG  211 (260)
T ss_dssp             EEECTTCCEEEEEGGGTEEEEECTTTCCEEEC-------------CCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTT
T ss_pred             eeecCCCCEeeeccccccccccccccceeeee-------------eccccCCCccceeeeeeeeeeeecCCCEEEEEeCC
Confidence            99999999888888888999998765433211             01223456789999999988888888888888754


Q ss_pred             CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ..... .+.              ...-.....++++++|.++++-..+++|+.++..
T Consensus       212 ~~~~~-~~~--------------~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~~  253 (260)
T d1rwia_         212 STTST-VLP--------------FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL  253 (260)
T ss_dssp             CSCCE-ECC--------------CCSCCCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred             CCeEE-EEc--------------cCCCCCeEEEEEeCCCCEEEEECCCCEEEEEeCC
Confidence            33211 110              0112245789999999988887778877766543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.12  E-value=7e-08  Score=69.48  Aligned_cols=206  Identities=11%  Similarity=0.046  Sum_probs=113.6

Q ss_pred             eEEEEeC--CCeEEEEEecCCceeeE---EEE-eccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeee--cccc
Q psy10662          5 HLAFGSA--DHCVHYYDLRNTKEALA---VFK-GHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV--GHIN   76 (221)
Q Consensus         5 ~l~~~~~--dg~i~i~~~~~~~~~~~---~~~-~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~--~~~~   76 (221)
                      .|++|+.  .+.|.++.++.....+.   ... .....+.-|+|+|++..+-+...+.+..|.+.....+....  ....
T Consensus         4 ~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~~~~   83 (365)
T d1jofa_           4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGG   83 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCS
T ss_pred             EEEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeecCCC
Confidence            4666654  56898888774332222   222 13445678999986654433345678888775432222221  1223


Q ss_pred             ceeEEEEeCCCCE--EEEec-CCCeEEEEECCC-CeeeEEEEeecccc--eeEeeE-EEeeCceEEEEEecCCCEEEEec
Q psy10662         77 DKNFVGLATDGDY--VACGS-ENNSLYIYYKGL-SKHMHAYRFDTVRS--MLESSF-VGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        77 ~v~~~~~~~~~~~--l~~~~-~d~~v~iwd~~~-~~~~~~~~~~~~~~--~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                      ....+.++++++.  +++.. ..+.|..+.+.. +.....+..+....  ...... ......+.++.|+|+|+++++++
T Consensus        84 ~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d  163 (365)
T d1jofa_          84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD  163 (365)
T ss_dssp             SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred             CcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEee
Confidence            4567788888884  43332 345666655432 11111221111100  000000 11122467899999999887776


Q ss_pred             C-CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662        150 E-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV  220 (221)
Q Consensus       150 ~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~  220 (221)
                      . ...|.+|+......+....-         ... .......+.++|+|++++++... .+++|.+|++..++
T Consensus       164 ~g~d~v~~~~~~~~g~~~~~~~---------~~~-~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~  226 (365)
T d1jofa_         164 LTANKLWTHRKLASGEVELVGS---------VDA-PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT  226 (365)
T ss_dssp             TTTTEEEEEEECTTSCEEEEEE---------EEC-SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred             CCCCEEEEEEccCCCceeeccc---------eee-cCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCC
Confidence            4 45788887655433222110         000 11234578899999999886655 58999999987653

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.10  E-value=2.1e-08  Score=68.82  Aligned_cols=154  Identities=10%  Similarity=0.044  Sum_probs=98.5

Q ss_pred             ceEEEEEecCCcEEEe-cCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662         36 AVSYVKFLNKEDIVSA-STDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        36 ~i~~~~~~~~~~l~s~-~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  114 (221)
                      ....+++.+++.++.+ ...+.+++++-.+...+.... .......+++.++++++++-..+..+..++.........  
T Consensus        58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~--  134 (260)
T d1rwia_          58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL--  134 (260)
T ss_dssp             SCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEEC--
T ss_pred             CceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeeee-eeeecccccccccceeEeeccccccccccccccceeeee--
Confidence            4577888876665544 445555555544444333322 234568899999998887776777777776544322110  


Q ss_pred             eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEE
Q psy10662        115 FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVC  194 (221)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  194 (221)
                                 ..........++++|+++++++...++.|..++........ +.              .........++
T Consensus       135 -----------~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~-~~--------------~~~~~~p~gi~  188 (260)
T d1rwia_         135 -----------PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-LP--------------FTDITAPWGIA  188 (260)
T ss_dssp             -----------CCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-CC--------------CSSCCSEEEEE
T ss_pred             -----------eecccCCcceeeecCCCCEeeeccccccccccccccceeee-ee--------------ccccCCCccce
Confidence                       01112345688999999988888888899999876543221 10              01223457899


Q ss_pred             EcCCCcEEEEecCCCeEEEEECCc
Q psy10662        195 WRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       195 ~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ++++|+++++-...+.|..++...
T Consensus       189 ~d~~g~l~vsd~~~~~i~~~~~~~  212 (260)
T d1rwia_         189 VDEAGTVYVTEHNTNQVVKLLAGS  212 (260)
T ss_dssp             ECTTCCEEEEETTTTEEEEECTTC
T ss_pred             eeeeeeeeeeecCCCEEEEEeCCC
Confidence            999999888888888888887654

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.09  E-value=6.6e-08  Score=66.98  Aligned_cols=176  Identities=16%  Similarity=0.151  Sum_probs=111.7

Q ss_pred             CeEEEEEecCCceeeEEEE-eccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceee--eccccceeEEEEeCCCC
Q psy10662         13 HCVHYYDLRNTKEALAVFK-GHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSF--VGHINDKNFVGLATDGD   88 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~~   88 (221)
                      +.|..++..  +.....+. ........+++.+++. +++....+.+.+++. +++.+..+  ..+......+++.++++
T Consensus        93 ~~i~~~~~~--g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~  169 (279)
T d1q7fa_          93 HQIQIYNQY--GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE  169 (279)
T ss_dssp             CEEEEECTT--SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred             ccccccccc--ccceeecCCCcccccceeccccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeecccee
Confidence            344444432  44444442 1234567788876555 445455667778775 45555544  23445678889999999


Q ss_pred             EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceee
Q psy10662         89 YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHA  167 (221)
Q Consensus        89 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~  167 (221)
                      .+++....+.|.+||.. ++.+.++.           ..+.......++++|+|+++++-. .++.|.+|+. .++.+..
T Consensus       170 i~v~d~~~~~V~~~d~~-G~~~~~~g-----------~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~  236 (279)
T d1q7fa_         170 IFISDNRAHCVKVFNYE-GQYLRQIG-----------GEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISA  236 (279)
T ss_dssp             EEEEEGGGTEEEEEETT-CCEEEEES-----------CTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEE
T ss_pred             EEeeeccccceeeeecC-Cceeeeec-----------ccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEE
Confidence            88888889999999864 34443321           012334567899999999777654 4557999974 4554444


Q ss_pred             eeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        168 YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      +...             ........+++.|+|+++++ +.++.|++|....
T Consensus       237 ~~~~-------------~~~~~p~~vav~~dG~l~V~-~~n~~v~~fr~~~  273 (279)
T d1q7fa_         237 LESK-------------VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ  273 (279)
T ss_dssp             EEES-------------SCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred             EeCC-------------CCCCCEeEEEEeCCCcEEEE-eCCCeEEEEEeee
Confidence            4211             11224578999999986655 5789999999865

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=3.7e-07  Score=62.44  Aligned_cols=189  Identities=10%  Similarity=0.084  Sum_probs=104.7

Q ss_pred             CCCceEEEEeCCC---eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEE-ecCCCcEEEEEcCCCc-cceeeecc
Q psy10662          1 MNSCHLAFGSADH---CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVS-ASTDSQLKLWNINKPN-CLRSFVGH   74 (221)
Q Consensus         1 ~~~~~l~~~~~dg---~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s-~~~d~~v~~wd~~~~~-~~~~~~~~   74 (221)
                      |||+.||......   .+.+.+..  ......+..+.+......|+|++. ++. ...++...++...... ........
T Consensus        48 PDGk~IAf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (269)
T d2hqsa1          48 PDGSKLAYVTFESGRSALVIQTLA--NGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG  125 (269)
T ss_dssp             TTSSEEEEEECTTSSCEEEEEETT--TCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC
T ss_pred             CCCCEEEEEEeeccCcceeeeecc--cCceeEEeeeecccccceecCCCCeeeEeeecCCccceeecccccccceeeeec
Confidence            7999998765443   35555554  333455566788889999998655 443 3334443333332221 12222223


Q ss_pred             ccceeEEEEeCCCCEE-EEecCCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         75 INDKNFVGLATDGDYV-ACGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        75 ~~~v~~~~~~~~~~~l-~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                      ........+++++..+ ++...++  .|...++..+....              ............|+|+++.++..+.+
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~--------------~~~~~~~~~~~~~spdg~~~~~~~~~  191 (269)
T d2hqsa1         126 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR--------------ITWEGSQNQDADVSSDGKFMVMVSSN  191 (269)
T ss_dssp             SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE--------------CCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred             cccccccccccccccceecccccCCceEeeeeccccccee--------------eecccccccccccccccceeEEEeec
Confidence            3344455677777654 4444454  35555555443221              12334456667899999988876654


Q ss_pred             -CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC---CCeEEEEECCccc
Q psy10662        152 -NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS---QGIIKIYVIPIRV  220 (221)
Q Consensus       152 -~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~  220 (221)
                       +...+|............               .+........|+|||++|+-.+.   ...|.++++.++.
T Consensus       192 ~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~  249 (269)
T d2hqsa1         192 GGQQHIAKQDLATGGVQVL---------------SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF  249 (269)
T ss_dssp             SSCEEEEEEETTTCCEEEC---------------CCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred             CCceeeeEeecccccceEe---------------ecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence             344444332222111110               12334567889999999875543   4578899988653

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.01  E-value=2.5e-07  Score=64.02  Aligned_cols=187  Identities=12%  Similarity=0.162  Sum_probs=115.7

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEec------cCceEEEEEec-CC-cEE-EecCCCcEEEEEcCCCccceee
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH------RKAVSYVKFLN-KE-DIV-SASTDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~------~~~i~~~~~~~-~~-~l~-s~~~d~~v~~wd~~~~~~~~~~   71 (221)
                      |+++++++-..++.|++||.+  ++.+..+...      ......+++.+ .+ .++ ..+.++.|..++. .++....+
T Consensus        32 ~dg~i~VaD~~n~rI~v~d~~--G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g~~~~~~  108 (279)
T d1q7fa_          32 AQNDIIVADTNNHRIQIFDKE--GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKF  108 (279)
T ss_dssp             TTCCEEEEEGGGTEEEEECTT--SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEE
T ss_pred             CCCCEEEEECCCCEEEEEeCC--CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc-cccceeec
Confidence            456666665566777777754  4445554321      11234555553 22 333 3345567777775 45555444


Q ss_pred             e-ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662         72 V-GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE  150 (221)
Q Consensus        72 ~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  150 (221)
                      . ........+++.+++.++++....+.+.+++.. ++.+..+.           ...+......+++.++++.+++...
T Consensus       109 ~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g-----------~~~~~~~~~~i~~d~~g~i~v~d~~  176 (279)
T d1q7fa_         109 GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFG-----------CSKHLEFPNGVVVNDKQEIFISDNR  176 (279)
T ss_dssp             CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE-----------CTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred             CCCcccccceeccccCCcEEEEeeccceeeEeccC-Cceeeccc-----------ccccccccceeeeccceeEEeeecc
Confidence            2 233456789999999988887778888888754 33333321           1123445678889999999988888


Q ss_pred             CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEEC
Q psy10662        151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVI  216 (221)
Q Consensus       151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~  216 (221)
                      .+.|++||.. ++.+..+.  .           .+.......++++++|+++++-+. ++.|.+++.
T Consensus       177 ~~~V~~~d~~-G~~~~~~g--~-----------~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~  229 (279)
T d1q7fa_         177 AHCVKVFNYE-GQYLRQIG--G-----------EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ  229 (279)
T ss_dssp             GTEEEEEETT-CCEEEEES--C-----------TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred             ccceeeeecC-Cceeeeec--c-----------cccccCCcccccccCCeEEEEECCCCcEEEEECC
Confidence            9999999864 33333221  1           123334678999999998777544 457888874

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.97  E-value=1.6e-07  Score=65.80  Aligned_cols=181  Identities=9%  Similarity=-0.018  Sum_probs=108.5

Q ss_pred             eeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEE
Q psy10662         25 EALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY  103 (221)
Q Consensus        25 ~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd  103 (221)
                      +.+..+.. ...+..+++.|++. +++...+++|..|+... + ...+......+.+++|.|+|+++++...++.+..++
T Consensus        19 ~v~~~~p~-~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~   95 (302)
T d2p4oa1          19 KIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDG-N-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVS   95 (302)
T ss_dssp             EEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTC-C-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             cEEEECCC-CCCcCCEEECCCCCEEEEeCCCCEEEEEeCCC-C-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEE
Confidence            44444442 33688999998665 55667788888888543 3 233444567889999999999988888888888777


Q ss_pred             CCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee--------------
Q psy10662        104 KGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR--------------  169 (221)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--------------  169 (221)
                      ..........         . ...........+++.++++++++-+.++.+..++...+.......              
T Consensus        96 ~~~~~~~~~~---------~-~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (302)
T d2p4oa1          96 LVKSDGTVET---------L-LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP  165 (302)
T ss_dssp             EECTTSCEEE---------E-EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred             ecccccceee---------c-cccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCccc
Confidence            5432211110         0 001123346778888888888877777777777665432111000              


Q ss_pred             ------eec--------ccccccc----------cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        170 ------FDT--------VRSMLER----------DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       170 ------~~~--------~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                            ++.        .......          .............++++++|++.++...++.|..++...
T Consensus       166 ~~ngi~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G  238 (302)
T d2p4oa1         166 AANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR  238 (302)
T ss_dssp             SEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred             ccccccccCCceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCC
Confidence                  000        0000000          000001123356799999999888887888888887654

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.94  E-value=1.6e-06  Score=60.85  Aligned_cols=196  Identities=10%  Similarity=0.026  Sum_probs=111.3

Q ss_pred             CCCceEEEEeC-------CCeEEEEEecCCceeeEEEEe----ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccc
Q psy10662          1 MNSCHLAFGSA-------DHCVHYYDLRNTKEALAVFKG----HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCL   68 (221)
Q Consensus         1 ~~~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~----~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~   68 (221)
                      |+|+++++...       +|.|..||.. ++........    ..+....++|.++ +.++++...+.+...+.......
T Consensus        27 ~dG~ly~~~~~~~~~~~~~g~I~r~d~~-~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~  105 (314)
T d1pjxa_          27 KNGDFYIVAPEVEVNGKPAGEILRIDLK-TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEE  105 (314)
T ss_dssp             TTSCEEEEETTCEETTEECCEEEEECTT-TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEE
T ss_pred             CCCCEEEEECccccccccCCEEEEEECC-CCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEE
Confidence            46666665322       3567777766 3332222111    1123568999975 45777776677888887654322


Q ss_pred             eeeeccc----cceeEEEEeCCCCEEEEecC---------------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEe
Q psy10662         69 RSFVGHI----NDKNFVGLATDGDYVACGSE---------------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH  129 (221)
Q Consensus        69 ~~~~~~~----~~v~~~~~~~~~~~l~~~~~---------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (221)
                      .......    ...+.+++.++|.+.++-..               .|.|..++.. ++..              .+...
T Consensus       106 ~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~--------------~~~~~  170 (314)
T d1pjxa_         106 IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI--------------QVDTA  170 (314)
T ss_dssp             CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE--------------EEEEE
T ss_pred             EEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-Ccee--------------EeeCC
Confidence            1111111    13577999999988776432               1233333321 1111              12233


Q ss_pred             eCceEEEEEecCCC-----EEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE
Q psy10662        130 INDKNFVGLATDGD-----YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA  204 (221)
Q Consensus       130 ~~~v~~~~~~~~~~-----~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  204 (221)
                      ....+.++|+|++.     +.++-+..+.|..||+.....+.....      .....  .........+++.++|++.++
T Consensus       171 ~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~------~~~~~--~~~~~~pdGiavD~~GnlyVa  242 (314)
T d1pjxa_         171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKV------WGHIP--GTHEGGADGMDFDEDNNLLVA  242 (314)
T ss_dssp             ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEE------EEECC--CCSSCEEEEEEEBTTCCEEEE
T ss_pred             cceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeE------EEEcc--ccccccceeeEEecCCcEEEE
Confidence            34557899999764     555567788899998765433321110      00000  011223567999999998888


Q ss_pred             ecCCCeEEEEECCccc
Q psy10662        205 ANSQGIIKIYVIPIRV  220 (221)
Q Consensus       205 ~~~dg~i~iw~~~~~~  220 (221)
                      ....+.|.+|+.++++
T Consensus       243 ~~~~g~I~~~dp~~g~  258 (314)
T d1pjxa_         243 NWGSSHIEVFGPDGGQ  258 (314)
T ss_dssp             EETTTEEEEECTTCBS
T ss_pred             EcCCCEEEEEeCCCCE
Confidence            7788999999987665

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.79  E-value=2.8e-06  Score=58.16  Aligned_cols=90  Identities=13%  Similarity=0.169  Sum_probs=58.9

Q ss_pred             CC--CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEe-cCC-----CcEEEEEcCCCccceee
Q psy10662          1 MN--SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSA-STD-----SQLKLWNINKPNCLRSF   71 (221)
Q Consensus         1 ~~--~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~-~~d-----~~v~~wd~~~~~~~~~~   71 (221)
                      ||  |+.+|-.+ +|.|.+.|+. +++. +.+..+.+.+...+|+|++. |+-. ..+     ..|.+++..+++..+..
T Consensus         8 Pdi~G~~v~f~~-~~dl~~~d~~-~g~~-~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt   84 (281)
T d1k32a2           8 PDIHGDRIIFVC-CDDLWEHDLK-SGST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRIT   84 (281)
T ss_dssp             EEEETTEEEEEE-TTEEEEEETT-TCCE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECC
T ss_pred             CCCCCCEEEEEe-CCcEEEEECC-CCCE-EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEee
Confidence            56  88888764 5678888987 4543 45666778899999998655 5533 222     23777777666554321


Q ss_pred             e------ccccceeEEEEeCCCCEEEEe
Q psy10662         72 V------GHINDKNFVGLATDGDYVACG   93 (221)
Q Consensus        72 ~------~~~~~v~~~~~~~~~~~l~~~   93 (221)
                      .      ..........|+|+++.++..
T Consensus        85 ~~~~~~~~~~~~~~~~~~spdg~~l~~~  112 (281)
T d1k32a2          85 YFSGKSTGRRMFTDVAGFDPDGNLIIST  112 (281)
T ss_dssp             CCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred             ecCCCccCccccccccccCCCCCEEEEE
Confidence            1      112245678899999987764

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.75  E-value=7.9e-06  Score=56.73  Aligned_cols=189  Identities=14%  Similarity=0.000  Sum_probs=112.0

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec----ccccee
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG----HINDKN   79 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~----~~~~v~   79 (221)
                      .+..+=-..+.|.-||.. +++ ...+. ....+.++++.+++.|+.++.+ .+..+|..+++.......    ....++
T Consensus        31 ~l~wvDi~~~~I~r~d~~-~g~-~~~~~-~~~~~~~i~~~~dg~l~va~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~n  106 (295)
T d2ghsa1          31 TAWWFNILERELHELHLA-SGR-KTVHA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSN  106 (295)
T ss_dssp             EEEEEEGGGTEEEEEETT-TTE-EEEEE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEE
T ss_pred             EEEEEECCCCEEEEEECC-CCe-EEEEE-CCCCcEEEEEecCCCEEEEEeC-ccEEeecccceeeEEeeeecCCCcccce
Confidence            333333345677777766 333 23333 4567889998877777776665 488899988765432211    123578


Q ss_pred             EEEEeCCCCEEEEecCC----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EEecCCCeE
Q psy10662         80 FVGLATDGDYVACGSEN----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-ACGSENNSL  154 (221)
Q Consensus        80 ~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i  154 (221)
                      .+.+.|+|.+.++...+    +.-.+|.+..++...              +.......+.++|+++++.+ ++-+..+.|
T Consensus       107 d~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~--------------~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I  172 (295)
T d2ghsa1         107 DGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTK--------------LFADISIPNSICFSPDGTTGYFVDTKVNRL  172 (295)
T ss_dssp             EEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEE--------------EEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred             eeEECCCCCEEEEeccccccccceeEeeecCCcEEE--------------EeeccCCcceeeecCCCceEEEeeccccee
Confidence            88999999876665322    233455444443221              12334456789999999865 455667889


Q ss_pred             EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662        155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP  217 (221)
Q Consensus       155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  217 (221)
                      ..|++........-       .........+.......++++.+|++.++.-..+.|..|+-.
T Consensus       173 ~~~~~d~~~~~~~~-------~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~  228 (295)
T d2ghsa1         173 MRVPLDARTGLPTG-------KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD  228 (295)
T ss_dssp             EEEEBCTTTCCBSS-------CCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred             eEeeeccccccccc-------ceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCC
Confidence            98887533211000       000000111223456788999999887776667888888854

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=3.9e-07  Score=67.65  Aligned_cols=206  Identities=12%  Similarity=0.109  Sum_probs=114.5

Q ss_pred             EeCCCeEEEEEecCCceeeEEEEec---cCceEEEEEecCCc-EEEe---------cCCCcEEEEEcCCCccceee--ec
Q psy10662          9 GSADHCVHYYDLRNTKEALAVFKGH---RKAVSYVKFLNKED-IVSA---------STDSQLKLWNINKPNCLRSF--VG   73 (221)
Q Consensus         9 ~~~dg~i~i~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~-l~s~---------~~d~~v~~wd~~~~~~~~~~--~~   73 (221)
                      -..+|.|.+||+. +++....+..+   .-.+....|+|++. ++..         +..+.+.++|+.++......  ..
T Consensus        33 ~~~~g~i~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~  111 (465)
T d1xfda1          33 REQKGTVRLWNVE-TNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV  111 (465)
T ss_dssp             CCSSSCEEEBCGG-GCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC
T ss_pred             EeCCCcEEEEECC-CCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccC
Confidence            3567899999998 44433333322   23567778898655 4433         34577899999887654322  22


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC---------ceEEEEEecCCCE
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN---------DKNFVGLATDGDY  144 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~  144 (221)
                      ....+....|+|+|+.+|-.. ++.|.+.+...++.++... +.....   .+.+...         .-..+-|||||+.
T Consensus       112 ~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~-~g~~~~---i~nG~~d~vyeee~~~~~~a~~WSPDgk~  186 (465)
T d1xfda1         112 SNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVS-TGKEGV---IYNGLSDWLYEEEILKTHIAHWWSPDGTR  186 (465)
T ss_dssp             CSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEEC-CCBTTT---EEEEECCHHHHHTTSSSSEEEEECTTSSE
T ss_pred             CccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEec-ccCcce---eeccccchhhhhhhccccceEEECCCCCe
Confidence            334567789999999987765 5568888877766554331 111111   1112211         1246789999999


Q ss_pred             EEEecC-CCeEEEEEcCCC--C---ceeeeeeecccc-----------------cc--cccccccccccceeEEEEcCCC
Q psy10662        145 VACGSE-NNSLYIYYKGLS--K---HMHAYRFDTVRS-----------------ML--ERDRNEDDTNEFVSAVCWRQLS  199 (221)
Q Consensus       145 l~~~~~-d~~i~~~d~~~~--~---~~~~~~~~~~~~-----------------~~--~~~~~~~~~~~~v~~~~~~~~~  199 (221)
                      ||.... +..+..+.+...  .   ....+.+...+.                 ..  ............+..+.|+|++
T Consensus       187 iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~  266 (465)
T d1xfda1         187 LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST  266 (465)
T ss_dssp             EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS
T ss_pred             EEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCC
Confidence            987653 344555543211  0   111111111000                 00  0001111223346789999999


Q ss_pred             cEEEEecC----CCeEEEEECCccc
Q psy10662        200 RVLVAANS----QGIIKIYVIPIRV  220 (221)
Q Consensus       200 ~~l~~~~~----dg~i~iw~~~~~~  220 (221)
                      ++++....    ...|.++|..+|+
T Consensus       267 ~~~~~~~nR~q~~~~i~~~d~~tg~  291 (465)
T d1xfda1         267 KVAVTWLNRAQNVSILTLCDATTGV  291 (465)
T ss_dssp             EEEEEEEETTSCEEEEEEEETTTCC
T ss_pred             eEEEEEEccccccceEEEEcCCCCc
Confidence            87766432    2367788887765

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.70  E-value=1.3e-05  Score=56.31  Aligned_cols=154  Identities=8%  Similarity=0.043  Sum_probs=92.0

Q ss_pred             ceEEEEEecCCcEEEecCC-------CcEEEEEcCCCccceeeeccccceeEEEEeCCCCEE-EEecCCCeEEEEECCCC
Q psy10662         36 AVSYVKFLNKEDIVSASTD-------SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGLS  107 (221)
Q Consensus        36 ~i~~~~~~~~~~l~s~~~d-------~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~  107 (221)
                      ....+++.+++.+..+...       +.+..++... +.+..+...-...+.++|+|+++.| ++-+..+.|..||+...
T Consensus       131 ~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg-~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~  209 (319)
T d2dg1a1         131 CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF-RTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD  209 (319)
T ss_dssp             CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS-CCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             CCcceeEEeccceeecccccccccCcceeEEEeccc-ceeEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCC
Confidence            4677888877666655432       2244444332 2333332233345789999999855 55567889999987543


Q ss_pred             e-eeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662        108 K-HMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT  186 (221)
Q Consensus       108 ~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (221)
                      . ......      ...............++++++|++.++....+.|.+||. .++.+..+....         ...++
T Consensus       210 g~~~~~~~------~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~---------~~~~~  273 (319)
T d2dg1a1         210 GVTIQPFG------ATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPG---------RDEGH  273 (319)
T ss_dssp             SSSEEEEE------EEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTT---------GGGTC
T ss_pred             Cceecccc------ceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCC---------cCCCc
Confidence            2 111100      000000111123567999999998888888999999995 577666664321         11134


Q ss_pred             ccceeEEEEcCCCcEEEEec
Q psy10662        187 NEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       187 ~~~v~~~~~~~~~~~l~~~~  206 (221)
                      ...+.+++|.+++..+++.+
T Consensus       274 ~~~~~~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         274 MLRSTHPQFIPGTNQLIICS  293 (319)
T ss_dssp             SCBCCEEEECTTSCEEEEEE
T ss_pred             CceeeeEEEeCCCCEEEEEc
Confidence            44678999999877666654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=3.3e-07  Score=68.05  Aligned_cols=164  Identities=11%  Similarity=0.122  Sum_probs=96.6

Q ss_pred             EEEecCCcEEEecCCCcEEEEEcCCCccceeeecc---ccceeEEEEeCCCCEEEEe---------cCCCeEEEEECCCC
Q psy10662         40 VKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGH---INDKNFVGLATDGDYVACG---------SENNSLYIYYKGLS  107 (221)
Q Consensus        40 ~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~---------~~d~~v~iwd~~~~  107 (221)
                      ..|.+++.++.-..+|.|.+||+.+++....+...   .-.+....|+||+++++..         +..+.+.++|+.++
T Consensus        22 ~~W~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          22 AKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             CCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             CEEeCCCcEEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            35777666666667889999999887654333221   2356778899999987665         33567889998876


Q ss_pred             eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccc-ccccc---c
Q psy10662        108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML-ERDRN---E  183 (221)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~---~  183 (221)
                      +.....           ........+....|||+|+.+|-.. ++.|.+.+...+...+... +...... .-...   .
T Consensus       102 ~~~~l~-----------~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~-~g~~~~i~nG~~d~vye  168 (465)
T d1xfda1         102 DPQSLD-----------PPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVS-TGKEGVIYNGLSDWLYE  168 (465)
T ss_dssp             CCEECC-----------CTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEEC-CCBTTTEEEEECCHHHH
T ss_pred             ceeecc-----------CccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEec-ccCcceeeccccchhhh
Confidence            543210           1112233455688999999987654 5678888877665443322 1111000 00000   0


Q ss_pred             cccccceeEEEEcCCCcEEEEecC-CCeEEEEEC
Q psy10662        184 DDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVI  216 (221)
Q Consensus       184 ~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~  216 (221)
                      ......-.++-|||||++||.... +..+..+.+
T Consensus       169 ee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~  202 (465)
T d1xfda1         169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL  202 (465)
T ss_dssp             HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred             hhhccccceEEECCCCCeEEEEEecccccceeec
Confidence            000111246789999999998753 344444443

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.44  E-value=7.2e-05  Score=51.75  Aligned_cols=179  Identities=11%  Similarity=0.041  Sum_probs=105.8

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEe----ccCceEEEEEecCCcEEEecC-----CCcEEEEEcCCCccceeee
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKG----HRKAVSYVKFLNKEDIVSAST-----DSQLKLWNINKPNCLRSFV   72 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~l~s~~~-----d~~v~~wd~~~~~~~~~~~   72 (221)
                      +|.++++ +.+ -|.++|.. +++.......    ....+..+.+.|++.+..++.     .+.-.+|.+..++......
T Consensus        69 dg~l~va-~~~-gl~~~d~~-tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~  145 (295)
T d2ghsa1          69 DSKQLIA-SDD-GLFLRDTA-TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA  145 (295)
T ss_dssp             TTEEEEE-ETT-EEEEEETT-TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE
T ss_pred             CCCEEEE-EeC-ccEEeecc-cceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee
Confidence            4555554 454 47788887 4443222211    112477888888777665542     2344566666665444333


Q ss_pred             ccccceeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662         73 GHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN  151 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  151 (221)
                       .-...+.++|+++++.+ ++-+..+.|..+++........     ..........+.......++++.+|++.++.-..
T Consensus       146 -~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~-----~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~  219 (295)
T d2ghsa1         146 -DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPT-----GKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE  219 (295)
T ss_dssp             -EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBS-----SCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT
T ss_pred             -ccCCcceeeecCCCceEEEeecccceeeEeeecccccccc-----cceEEEeccCcccccccceEEcCCCCEEeeeeCC
Confidence             23345789999999854 5666778888888643211100     0000011112234457788999999988877778


Q ss_pred             CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc-CCCcEEEEe
Q psy10662        152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR-QLSRVLVAA  205 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~  205 (221)
                      +.|..||. .++.+..+...               ...+++++|- |+.+.|+..
T Consensus       220 g~V~~~dp-~G~~~~~i~lP---------------~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         220 GAVDRYDT-DGNHIARYEVP---------------GKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             TEEEEECT-TCCEEEEEECS---------------CSBEEEEEEESTTSCEEEEE
T ss_pred             CceEEecC-CCcEeeEecCC---------------CCceEEEEEeCCCCCEEEEE
Confidence            89999994 56666665421               2357899995 676666543

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.31  E-value=0.00014  Score=49.56  Aligned_cols=198  Identities=12%  Similarity=0.194  Sum_probs=118.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCC-ccceeeeccc----
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP-NCLRSFVGHI----   75 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~~----   75 (221)
                      |..+.||.-+ ...+.|||++ +++.++.+. ...+|.-=.|-++..|+..+ +..|+-|+++.. .+.+.+..|.    
T Consensus        72 P~~~IiALra-g~~LQiFnle-tK~klks~~-~~e~VvfWkWis~~~L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~  147 (327)
T d1utca2          72 PASKVIALKA-GKTLQIFNIE-MKSKMKAHT-MTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG  147 (327)
T ss_dssp             SSSSEEEEEE-TTEEEEEETT-TTEEEEEEE-CSSCCCEEEESSSSEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTT
T ss_pred             CCCcEEEEec-CCeEEEEehh-HhhhhceEE-cCCCcEEEEecCCCEEEEEc-CCceEEEcccCCCCchhhhhhcccccC
Confidence            5566777765 5589999998 777788777 45577777787777766554 456999999543 4555565553    


Q ss_pred             cceeEEEEeCCCCEEEEec---C----CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC--C-CEE
Q psy10662         76 NDKNFVGLATDGDYVACGS---E----NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD--G-DYV  145 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~---~----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l  145 (221)
                      ..|-.-..+++.+.++..+   .    .|.+.+|..+....              +.+++|...-..+.+.-+  . +++
T Consensus       148 ~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~s--------------Q~ieGhaa~F~~~~~~g~~~~~~lf  213 (327)
T d1utca2         148 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--------------QPIEGHAASFAQFKMEGNAEESTLF  213 (327)
T ss_dssp             CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE--------------EEECCSEEEEEEECCTTCSSCEEEE
T ss_pred             ceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcC--------------ccccceeeeeEEEEcCCCCCCceEE
Confidence            3566666788888654332   2    25567777655433              223455443333332211  1 122


Q ss_pred             EE---ecCCCeEEEEEcCCCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        146 AC---GSENNSLYIYYKGLSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       146 ~~---~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      +-   +...+.+.+.++..... -..+.    .+........+.......++..++.-..++.-+.-|.|++||+.++.
T Consensus       214 ~fa~r~~~~~kLhIiEig~~~~g~~~f~----kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt  288 (327)
T d1utca2         214 CFAVRGQAGGKLHIIEVGTPPTGNQPFP----KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT  288 (327)
T ss_dssp             EEEEEETTEEEEEEEECSCCCTTCCCCC----CEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred             EEEECCCCCcEEEEEEcCCCccCCCCCc----ceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEccccc
Confidence            21   12336788888765321 11111    00001111111223445678999988899999999999999999986

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.22  E-value=0.00022  Score=48.10  Aligned_cols=168  Identities=10%  Similarity=0.026  Sum_probs=92.5

Q ss_pred             eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecC-CC--cEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662         14 CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAST-DS--QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY   89 (221)
Q Consensus        14 ~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~-d~--~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~   89 (221)
                      .|.|.|.+  +...+.+..+...+.+.+|||++. |+-... .+  .+.+.+...+... .+..+........|+|+|+.
T Consensus        20 ~l~i~d~d--G~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~   96 (269)
T d2hqsa1          20 ELRVSDYD--GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSK   96 (269)
T ss_dssp             EEEEEETT--SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSE
T ss_pred             EEEEEcCC--CCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEeeeecccccceecCCCCe
Confidence            57777876  333444555678899999998655 554333 32  4666666555443 34456777889999999998


Q ss_pred             EEEecC-CCeE--EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE-EecCCCe--EEEEEcCCCC
Q psy10662         90 VACGSE-NNSL--YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA-CGSENNS--LYIYYKGLSK  163 (221)
Q Consensus        90 l~~~~~-d~~v--~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~~~d~~~~~  163 (221)
                      ++.... ++..  ..+.........              ............+++++..++ +...++.  |.+.++....
T Consensus        97 i~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~  162 (269)
T d2hqsa1          97 LAFALSKTGSLNLYVMDLASGQIRQ--------------VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA  162 (269)
T ss_dssp             EEEEECTTSSCEEEEEETTTCCEEE--------------CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred             eeEeeecCCccceeeccccccccee--------------eeeccccccccccccccccceecccccCCceEeeeeccccc
Confidence            765443 3222  222222221111              112223334455666666544 3444554  4444444332


Q ss_pred             ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEE
Q psy10662        164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIY  214 (221)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw  214 (221)
                      ...                ............|+|+++.++..+. .+...+|
T Consensus       163 ~~~----------------~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~  198 (269)
T d2hqsa1         163 PQR----------------ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIA  198 (269)
T ss_dssp             CEE----------------CCCSSSEEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred             cee----------------eecccccccccccccccceeEEEeecCCceeee
Confidence            211                1123445667899999998887664 3344443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.22  E-value=0.00034  Score=50.21  Aligned_cols=210  Identities=8%  Similarity=0.011  Sum_probs=118.2

Q ss_pred             CCceEEEEe-CCCeEEEEEecCCceeeEEEEe-ccCceEEEEEe--cC-CcEEEecCC------------------CcEE
Q psy10662          2 NSCHLAFGS-ADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFL--NK-EDIVSASTD------------------SQLK   58 (221)
Q Consensus         2 ~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~-~~l~s~~~d------------------~~v~   58 (221)
                      ||++|.+.. .++.|.+.|++ ..+..+.+.- ....+..++..  |. .+++..+.+                  +.+.
T Consensus        98 DGrylFVNDkan~RVAvIdl~-~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t  176 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCD-VMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  176 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETT-TTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEE
T ss_pred             ceeEEEEEcCCCceEEEEECc-ceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEE
Confidence            677777765 46789999998 6776665442 23456776665  32 345554442                  2356


Q ss_pred             EEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCC---------------eEEEEECCCC---------ee---eE
Q psy10662         59 LWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENN---------------SLYIYYKGLS---------KH---MH  111 (221)
Q Consensus        59 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~v~iwd~~~~---------~~---~~  111 (221)
                      +.|..+.+....+. -......++++++|+++++.+.+.               .+.+++....         +.   +.
T Consensus       177 ~ID~~tm~V~~QV~-V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~  255 (459)
T d1fwxa2         177 AVDADKWEVAWQVL-VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  255 (459)
T ss_dssp             EEETTTTEEEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EEecCCceEEEEee-eCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCce
Confidence            78888777766554 234567899999999988766431               1233332100         00   01


Q ss_pred             EEEeecc-cceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662        112 AYRFDTV-RSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF  189 (221)
Q Consensus       112 ~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (221)
                      .+..... ....+.. -.-......+.++|||+++++++ .+..+.++|++.-.....-..+...    .+.........
T Consensus       256 VVD~~~~~~~~v~~y-IPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~----~~~~e~elglg  330 (459)
T d1fwxa2         256 VVDGRKEASSLFTRY-IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRS----AVVAEPELGLG  330 (459)
T ss_dssp             EEECSGG--CSSEEE-EEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGG----GEEECCBCCSC
T ss_pred             eecccccCCcceeEE-EecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccc----cEEeecccCcC
Confidence            1100000 1111111 22234466789999999887655 5889999998643222110001100    00011112233


Q ss_pred             eeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662        190 VSAVCWRQLSRVLVAANSQGIIKIYVIPI  218 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  218 (221)
                      ...-+|+..|....+.--|.+|.-|++..
T Consensus       331 PLht~fd~~g~aytslfids~v~kw~~~~  359 (459)
T d1fwxa2         331 PLHTAFDGRGNAYTSLFLDSQVVKWNIED  359 (459)
T ss_dssp             EEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             ccccccCCCceEEEEeeccceEEEEecch
Confidence            45678988887666667899999999853

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.93  E-value=0.0012  Score=49.90  Aligned_cols=24  Identities=13%  Similarity=-0.090  Sum_probs=20.5

Q ss_pred             CCcEEEEecCCCeEEEEECCcccC
Q psy10662        198 LSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       198 ~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      .+.++++++.||.++.+|.++|++
T Consensus       474 agglVf~G~~dg~l~A~Da~tGe~  497 (571)
T d2ad6a1         474 KGGLVWYATLDGYLKALDNKDGKE  497 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcE
Confidence            466788899999999999999873

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.82  E-value=0.00015  Score=49.25  Aligned_cols=101  Identities=16%  Similarity=0.182  Sum_probs=61.6

Q ss_pred             EEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec----CCC--e
Q psy10662         82 GLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS----ENN--S  153 (221)
Q Consensus        82 ~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~--~  153 (221)
                      ..+|+  |+.++-.+ ++.|.+.|+..++..+              +..+.......+|||||+.||-..    .+.  .
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~--------------Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~   69 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRK--------------IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTAD   69 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEE--------------EECSSSEEEEEEECTTSSEEEEEEEESTTCCEEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEE--------------EecCCCcccCEEECCCCCEEEEEEeeCCCCCceE
Confidence            35788  88876554 4568888998776532              344556677889999999888543    222  3


Q ss_pred             EEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662        154 LYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       154 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      |.+++...++.........         .............|+|+|+.|+...
T Consensus        70 i~~~~~~~g~~~~lt~~~~---------~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          70 LYFYNGENGEIKRITYFSG---------KSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             EEEEETTTTEEEECCCCCE---------EEETTEECSEEEEECTTCCEEEEEC
T ss_pred             EEEEEecCCceEEeeecCC---------CccCccccccccccCCCCCEEEEEE
Confidence            6666666554432111000         0001223456788999999888653

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.56  E-value=0.0062  Score=43.69  Aligned_cols=154  Identities=6%  Similarity=0.020  Sum_probs=86.2

Q ss_pred             EEEecCCCcEEEEEcCCCccceeeec-cccceeEEEEe--CCCCEEEEecCCC------------------eEEEEECCC
Q psy10662         48 IVSASTDSQLKLWNINKPNCLRSFVG-HINDKNFVGLA--TDGDYVACGSENN------------------SLYIYYKGL  106 (221)
Q Consensus        48 l~s~~~d~~v~~wd~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~d~------------------~v~iwd~~~  106 (221)
                      ++.-..+..|.+-|+++.+..+.+.. ....+..+...  |+..|++..+++.                  .+.+.|..+
T Consensus       103 FVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ID~~t  182 (459)
T d1fwxa2         103 FMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK  182 (459)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEEETTT
T ss_pred             EEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEEecCC
Confidence            44555788999999998887554422 23345666654  4556787766633                  245667776


Q ss_pred             CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC---------------eEEEEEcCCC-------C-
Q psy10662        107 SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN---------------SLYIYYKGLS-------K-  163 (221)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~i~~~d~~~~-------~-  163 (221)
                      .+....+             . -......++++|+|+++++.+.+.               .+.+++....       + 
T Consensus       183 m~V~~QV-------------~-V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~  248 (459)
T d1fwxa2         183 WEVAWQV-------------L-VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY  248 (459)
T ss_dssp             TEEEEEE-------------E-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred             ceEEEEe-------------e-eCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCc
Confidence            6665443             1 123456789999999988876431               2333332100       0 


Q ss_pred             ----ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEECC
Q psy10662        164 ----HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVIP  217 (221)
Q Consensus       164 ----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~  217 (221)
                          ....++  ............-.-......+.++|||+++++++. +..+.++|++
T Consensus       249 ~eingV~VVD--~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~  305 (459)
T d1fwxa2         249 QELNGVKVVD--GRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT  305 (459)
T ss_dssp             EEETTEEEEE--CSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred             EEeCCceeec--ccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEeh
Confidence                000010  000000000000011223457899999999988775 9999999985

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.52  E-value=0.01  Score=45.00  Aligned_cols=67  Identities=13%  Similarity=0.125  Sum_probs=42.9

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccCce-EEEEEec---CCcEEEecC------CCcEEEEEcCCCccceee
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAV-SYVKFLN---KEDIVSAST------DSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i-~~~~~~~---~~~l~s~~~------d~~v~~wd~~~~~~~~~~   71 (221)
                      .+++.++.|+.|.-.|.+ +++.+..+....... ..+.-.|   ++.++.+..      .|.|+-+|.++++.+-.+
T Consensus       122 ~~v~~~t~dg~l~Alda~-tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~  198 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAE-TGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRA  198 (596)
T ss_dssp             CEEEEECTTSEEEEEETT-TCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred             eEEEEEeCCCCeEeeccc-cCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEe
Confidence            467888899999999987 777777765321111 1111112   555666543      488999999998776543

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.52  E-value=0.0063  Score=42.63  Aligned_cols=138  Identities=10%  Similarity=0.107  Sum_probs=75.1

Q ss_pred             CCeEEEEEecCCceeeEEEEeccC-------ceEEEEEe--cCC--cEEEe---cCCCcEEEEEcCCCccc----eeee-
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHRK-------AVSYVKFL--NKE--DIVSA---STDSQLKLWNINKPNCL----RSFV-   72 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~~-------~i~~~~~~--~~~--~l~s~---~~d~~v~~wd~~~~~~~----~~~~-   72 (221)
                      .|.|.++|+.+.......+.....       ....+...  +++  +|++.   ....+|.+|++......    .++. 
T Consensus        67 ~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~  146 (340)
T d1v04a_          67 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH  146 (340)
T ss_dssp             CCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred             CCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC
Confidence            489999998744333333322211       23444442  233  24444   34567888887543321    1121 


Q ss_pred             ccccceeEEEEeCCCCEEEEec--C---------------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662         73 GHINDKNFVGLATDGDYVACGS--E---------------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF  135 (221)
Q Consensus        73 ~~~~~v~~~~~~~~~~~l~~~~--~---------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  135 (221)
                      ......+.+.+..++.+++|-.  .               -+.+.-||....+                .....-...+.
T Consensus       147 ~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~----------------~~~~~l~~pNG  210 (340)
T d1v04a_         147 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVR----------------VVAEGFDFANG  210 (340)
T ss_dssp             TTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEE----------------EEEEEESSEEE
T ss_pred             ccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceE----------------EEcCCCCccce
Confidence            1123467888888888777731  1               1222233322111                11233456889


Q ss_pred             EEEecCCCEEEE-ecCCCeEEEEEcCCCCce
Q psy10662        136 VGLATDGDYVAC-GSENNSLYIYYKGLSKHM  165 (221)
Q Consensus       136 ~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~  165 (221)
                      ++++|++++|++ -+..+.|+.|++.....+
T Consensus       211 I~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l  241 (340)
T d1v04a_         211 INISPDGKYVYIAELLAHKIHVYEKHANWTL  241 (340)
T ss_dssp             EEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred             eEECCCCCEEEEEeCCCCeEEEEEeCCCccc
Confidence            999999987654 456788999998765433

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.50  E-value=0.006  Score=46.01  Aligned_cols=24  Identities=13%  Similarity=0.166  Sum_probs=21.1

Q ss_pred             CCcEEEEecCCCeEEEEECCcccC
Q psy10662        198 LSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       198 ~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      .|.++++|+.||.++.+|..+|++
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~  510 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEK  510 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcE
Confidence            577888899999999999999873

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.39  E-value=0.014  Score=43.76  Aligned_cols=25  Identities=8%  Similarity=0.149  Sum_probs=21.3

Q ss_pred             CCCcEEEEecCCCeEEEEECCcccC
Q psy10662        197 QLSRVLVAANSQGIIKIYVIPIRVL  221 (221)
Q Consensus       197 ~~~~~l~~~~~dg~i~iw~~~~~~l  221 (221)
                      -.+.++++|+.||.++.+|..+|++
T Consensus       467 TagglVF~G~~dg~l~A~Da~tGe~  491 (560)
T d1kv9a2         467 TAGNLVFQGTAAGQMHAYSADKGEA  491 (560)
T ss_dssp             ETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             ECCCEEEEECCCCcEEEEECCCCcE
Confidence            3567888899999999999999873

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.30  E-value=0.018  Score=43.15  Aligned_cols=60  Identities=15%  Similarity=0.152  Sum_probs=41.0

Q ss_pred             CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662         97 NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus        97 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      |.+.-+|+.+++.+..+.+.              .....-.+.-.+.++++|+.||.++.+|.++++.+-.++.
T Consensus       438 G~l~A~D~~tGk~~W~~~~~--------------~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l  497 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYP--------------THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA  497 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEES--------------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             cceEEEeCCCCeEeeeccCC--------------CCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEEC
Confidence            46777788888777654221              1111112233566888899999999999999999877753

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.23  E-value=0.023  Score=42.75  Aligned_cols=30  Identities=13%  Similarity=0.174  Sum_probs=25.6

Q ss_pred             CCCEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        141 DGDYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       141 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      .+.++++|+.||.++-+|.++++.+-+++.
T Consensus       474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l  503 (571)
T d2ad6a1         474 KGGLVWYATLDGYLKALDNKDGKELWNFKM  503 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEEEEEEC
Confidence            466788899999999999999999877753

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.14  E-value=0.015  Score=39.02  Aligned_cols=179  Identities=6%  Similarity=-0.056  Sum_probs=98.3

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcE-EEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCC
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD   88 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~   88 (221)
                      .++.|+..+++ .......+...-..+.++++.. ++.| ++-...+.|.+.++........+.........++++|...
T Consensus        56 ~~~~I~~~~l~-g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g  134 (263)
T d1npea_          56 SEPSIGRASLH-GGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRG  134 (263)
T ss_dssp             TTTEEEEEESS-SCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTT
T ss_pred             CCCeEEEEEcc-cCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccC
Confidence            34556666655 2322222332235678888874 4554 4556678999999875544332333335678999999877


Q ss_pred             EEEEec-C--CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCc
Q psy10662         89 YVACGS-E--NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKH  164 (221)
Q Consensus        89 ~l~~~~-~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~  164 (221)
                      +++-.. .  ...|.--++....... +            ....-..+..+++++.++.|... ...+.|...++.....
T Consensus       135 ~ly~t~~~~~~~~I~r~~~dG~~~~~-i------------~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~  201 (263)
T d1npea_         135 NLYWTDWNRDNPKIETSHMDGTNRRI-L------------AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR  201 (263)
T ss_dssp             EEEEEECCSSSCEEEEEETTSCCCEE-E------------ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred             cEEEeecCCCCcEEEEecCCCCCcee-e------------eeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCe
Confidence            665332 2  2233333443322111 1            11122456789999877766544 4567888888754432


Q ss_pred             eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662        165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV  220 (221)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  220 (221)
                      ...+.               +.. ...++++. ++.+..+-...+.|...+..+++
T Consensus       202 ~~v~~---------------~~~-~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~  240 (263)
T d1npea_         202 RKVLE---------------GLQ-YPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK  240 (263)
T ss_dssp             EEEEE---------------CCC-SEEEEEEE-TTEEEEEETTTTEEEEEETTTTE
T ss_pred             EEEEC---------------CCC-CcEEEEEE-CCEEEEEECCCCEEEEEECCCCc
Confidence            21111               111 12467665 34444554467888888877654

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.98  E-value=0.022  Score=38.20  Aligned_cols=186  Identities=10%  Similarity=0.000  Sum_probs=105.5

Q ss_pred             ceEEEEeCCCeEEEEEecCCc----eeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeeccccc
Q psy10662          4 CHLAFGSADHCVHYYDLRNTK----EALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVGHIND   77 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~   77 (221)
                      .+|+.+ ..+.|+-.+++...    .....+..+...+.+|+|.. ++.++ +-..++.|+..++........+......
T Consensus         2 ~fLl~s-~~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~   80 (263)
T d1npea_           2 THLLFA-QTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (263)
T ss_dssp             EEEEEE-EEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             CEEEEe-CCCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEecccc
Confidence            344444 34577777776221    11223344455688899985 45444 4456788998888765544333333346


Q ss_pred             eeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC-CeEE
Q psy10662         78 KNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN-NSLY  155 (221)
Q Consensus        78 v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~  155 (221)
                      +..+++..-+..| .+-...+.|.+.++....... +            .......+..++++|...++...... +..+
T Consensus        81 p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~-l------------~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~  147 (263)
T d1npea_          81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV-L------------FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPK  147 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-E------------ECSSCSSEEEEEEETTTTEEEEEECCSSSCE
T ss_pred             ccEEEEeccCCeEEEeccCCCEEEEEecCCceEEE-E------------ecccccCCcEEEEecccCcEEEeecCCCCcE
Confidence            7889998655544 555667789998886543311 1            11123457789999877666544322 2223


Q ss_pred             EE--EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        156 IY--YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       156 ~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      ++  ++.........               ...-....++++++.++.|+-+ ...+.|...++..
T Consensus       148 I~r~~~dG~~~~~i~---------------~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g  198 (263)
T d1npea_         148 IETSHMDGTNRRILA---------------QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ  198 (263)
T ss_dssp             EEEEETTSCCCEEEE---------------CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred             EEEecCCCCCceeee---------------eecccccceEEEeecCcEEEEEeCCCCEEEEEECCC
Confidence            43  33322211111               0112345788998877766554 4577888887764

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.97  E-value=0.017  Score=40.78  Aligned_cols=95  Identities=11%  Similarity=0.085  Sum_probs=60.0

Q ss_pred             EEEEEcCCCcccee--e-eccccceeEEEEeCCCCEEEEecCC-CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc
Q psy10662         57 LKLWNINKPNCLRS--F-VGHINDKNFVGLATDGDYVACGSEN-NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND  132 (221)
Q Consensus        57 v~~wd~~~~~~~~~--~-~~~~~~v~~~~~~~~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (221)
                      +.+||..+++....  . ..+.......++.+++.+++.|+.+ ..+.+||..+.+....-           .+.. ...
T Consensus        54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~-----------~~~~-~r~  121 (387)
T d1k3ia3          54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGP-----------DMQV-ARG  121 (387)
T ss_dssp             EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECC-----------CCSS-CCS
T ss_pred             EEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcccccc-----------cccc-ccc
Confidence            67899988754322  1 2233334566788999998888765 57999998776543210           0111 111


Q ss_pred             eEEEEEecCCCEEEEecCC------CeEEEEEcCCCC
Q psy10662        133 KNFVGLATDGDYVACGSEN------NSLYIYYKGLSK  163 (221)
Q Consensus       133 v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~  163 (221)
                      -..++..++|++++.|+.+      ..+.+||..+.+
T Consensus       122 ~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         122 YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             ccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence            2346667899999988753      358889887664

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.97  E-value=0.043  Score=41.29  Aligned_cols=61  Identities=16%  Similarity=0.030  Sum_probs=42.7

Q ss_pred             CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662         96 NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus        96 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      .|.+.-+|+.+++.+.....              ..++..-.++..+.++++|+.||.++-+|.++++.+-.++.
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~--------------~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~  525 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKE--------------HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT  525 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEE--------------SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CCeEEEEcCCCCcEEeecCC--------------CCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEEC
Confidence            36788888888887765421              11121112345677888899999999999999999877763

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=96.85  E-value=0.054  Score=40.66  Aligned_cols=32  Identities=19%  Similarity=0.263  Sum_probs=27.0

Q ss_pred             ecCCCEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        139 ATDGDYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       139 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      +-.+.++++|+.||.++.+|.++++.+-.++.
T Consensus       485 stagglVF~G~~dg~l~A~Da~TGe~LW~~~~  516 (573)
T d1kb0a2         485 TTAGNVVFQGTADGRLVAYHAATGEKLWEAPT  516 (573)
T ss_dssp             EETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             EEcCCEEEEECCCCeEEEEECCCCcEeEEEEC
Confidence            33677888899999999999999999877753

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.81  E-value=0.061  Score=40.62  Aligned_cols=111  Identities=13%  Similarity=0.026  Sum_probs=68.9

Q ss_pred             CCceEEEEeCCCeEEEEEecCCceeeEEEEeccC----c-------eEEEEEecC-----CcEEEecCCCcEEEEEcCCC
Q psy10662          2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----A-------VSYVKFLNK-----EDIVSASTDSQLKLWNINKP   65 (221)
Q Consensus         2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~-------i~~~~~~~~-----~~l~s~~~d~~v~~wd~~~~   65 (221)
                      ++.++++.+.++.|...|..++++.+..+.....    .       -+.+++.++     ..++.++.|+.|.-.|.+++
T Consensus        62 ~g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG  141 (596)
T d1w6sa_          62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (596)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEeeccccC
Confidence            3445555555677877786546787777642111    0       134555432     24888899999999999999


Q ss_pred             ccceeeeccc---c-ceeE-EEEeCCCCEEEEecC------CCeEEEEECCCCeeeEEEE
Q psy10662         66 NCLRSFVGHI---N-DKNF-VGLATDGDYVACGSE------NNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        66 ~~~~~~~~~~---~-~v~~-~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~  114 (221)
                      +.+..+....   . .++. -.+.  +..++.+..      .|.|+-+|+++++.+..+.
T Consensus       142 ~~~w~~~~~d~~~~~~~t~~P~v~--~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~  199 (596)
T d1w6sa_         142 ETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY  199 (596)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             ceeccccccccccccccccCCcEE--CCeEEEeeccccccccCceEEEECCCCcEEEEee
Confidence            9887663211   1 1111 0111  334555532      4899999999999998764

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.49  E-value=0.069  Score=37.20  Aligned_cols=31  Identities=13%  Similarity=0.125  Sum_probs=24.5

Q ss_pred             cceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        188 EFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       188 ~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      ...+.++++||+++|+.+ +..++|+.|++..
T Consensus       206 ~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~  237 (340)
T d1v04a_         206 DFANGINISPDGKYVYIAELLAHKIHVYEKHA  237 (340)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             CccceeEECCCCCEEEEEeCCCCeEEEEEeCC
Confidence            356899999999877655 4688999998864

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.46  E-value=0.085  Score=37.93  Aligned_cols=103  Identities=14%  Similarity=0.142  Sum_probs=61.8

Q ss_pred             eeEEEEeCCCCEEEEe-----cCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC-
Q psy10662         78 KNFVGLATDGDYVACG-----SENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN-  151 (221)
Q Consensus        78 v~~~~~~~~~~~l~~~-----~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  151 (221)
                      +..++++|++++++.+     ++...++++|+.+++.+...            +..  .....++|.++++.|+-...+ 
T Consensus       127 ~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~------------i~~--~~~~~~~W~~D~~~~~Y~~~~~  192 (430)
T d1qfma1         127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV------------LER--VKFSCMAWTHDGKGMFYNAYPQ  192 (430)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE------------EEE--ECSCCEEECTTSSEEEEEECCC
T ss_pred             ecceEecCCCCEEEEEeccccCchheeEEeccCcceecccc------------ccc--ccccceEEcCCCCEEEEEEecc
Confidence            4556789999987632     22347999999999875421            111  122468899999877643322 


Q ss_pred             ---------------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662        152 ---------------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA  205 (221)
Q Consensus       152 ---------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  205 (221)
                                     ..|..+.+.+......+-+..           ......+..+..++++++++..
T Consensus       193 ~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e-----------~d~~~~~~~~~~s~d~~~l~i~  250 (430)
T d1qfma1         193 QDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF-----------PDEPKWMGGAELSDDGRYVLLS  250 (430)
T ss_dssp             CSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC-----------TTCTTCEEEEEECTTSCEEEEE
T ss_pred             ccCcccccccccCCcceEEEEECCCCcccccccccc-----------ccCCceEEeeeccCCcceeeEE
Confidence                           256677666554332222211           1122345677789999987643

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.43  E-value=0.035  Score=39.05  Aligned_cols=115  Identities=10%  Similarity=0.004  Sum_probs=66.0

Q ss_pred             EEEeCCCCEEEEecCC-----C------eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662         81 VGLATDGDYVACGSEN-----N------SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus        81 ~~~~~~~~~l~~~~~d-----~------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                      .....+|+.++.|+.+     +      .+.+||..+++....-          .....+.......++.+++++++.|+
T Consensus        25 a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~----------~~~~~~~~~~~~~~~~~~g~i~v~Gg   94 (387)
T d1k3ia3          25 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT----------VTVTKHDMFCPGISMDGNGQIVVTGG   94 (387)
T ss_dssp             EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE----------EEECSCCCSSCEEEECTTSCEEEECS
T ss_pred             EEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecC----------CCCCCcccceeEEEEecCCcEEEeec
Confidence            3344566666665532     1      3668888776542211          00111222233567889999999887


Q ss_pred             CC-CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC------CeEEEEECCcc
Q psy10662        150 EN-NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ------GIIKIYVIPIR  219 (221)
Q Consensus       150 ~d-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~  219 (221)
                      .+ ..+.+||..+......      .       .... ...-..++..+||++++.++.+      ..+.+||..+.
T Consensus        95 ~~~~~~~~yd~~~~~w~~~------~-------~~~~-~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~  157 (387)
T d1k3ia3          95 NDAKKTSLYDSSSDSWIPG------P-------DMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK  157 (387)
T ss_dssp             SSTTCEEEEEGGGTEEEEC------C-------CCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred             CCCcceeEecCccCccccc------c-------cccc-cccccceeeecCCceeeeccccccccccceeeeecCCCC
Confidence            65 5799999876543211      1       0001 1112346677899999988742      35888988764

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.01  E-value=0.13  Score=35.84  Aligned_cols=195  Identities=12%  Similarity=0.122  Sum_probs=105.1

Q ss_pred             CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEe------cCC-cEEEec-C-C--CcEEEEEcCCC-ccc
Q psy10662          1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFL------NKE-DIVSAS-T-D--SQLKLWNINKP-NCL   68 (221)
Q Consensus         1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~-~l~s~~-~-d--~~v~~wd~~~~-~~~   68 (221)
                      |+.++++....++-|++||+.  ++.++.+.  .+.+..+..-      ... .++.++ . +  .+|.+|.+... ..+
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~--G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l  113 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLE--GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL  113 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETT--CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE
T ss_pred             cCccEEEEEcCcCCEEEEcCC--CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc
Confidence            345677777788789999996  55555543  3455554432      112 144444 2 2  35777877432 222


Q ss_pred             eeeec-------cccceeEEEE--eCC-CC-EEEEecCCCeEEEEECC---CCeeeEEEEeecccceeEeeEEEeeCceE
Q psy10662         69 RSFVG-------HINDKNFVGL--ATD-GD-YVACGSENNSLYIYYKG---LSKHMHAYRFDTVRSMLESSFVGHINDKN  134 (221)
Q Consensus        69 ~~~~~-------~~~~v~~~~~--~~~-~~-~l~~~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  134 (221)
                      ..+..       ....+..+++  +|. +. +++....+|.+..|.+.   .+....         ..++.+ .....+-
T Consensus       114 ~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~---------~lvr~f-~~~~q~E  183 (353)
T d1h6la_         114 QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISG---------KKVRAF-KMNSQTE  183 (353)
T ss_dssp             EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEE---------EEEEEE-ECSSCEE
T ss_pred             ccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceee---------Eeeecc-CCCCccc
Confidence            22211       1124666666  554 43 56777788999888663   221111         112222 2345688


Q ss_pred             EEEEecCCCEEEEecCCCeEEEEEcCCCCce-eeeeeecccccccccccccccccceeEEEE--cCC--CcEEEEecCCC
Q psy10662        135 FVGLATDGDYVACGSENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVSAVCW--RQL--SRVLVAANSQG  209 (221)
Q Consensus       135 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~--~~~l~~~~~dg  209 (221)
                      .|.+++....|..+-++..|..+++...... ..+......         .....-+-.++.  .++  |-+|++.-.++
T Consensus       184 GCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g---------~~l~~D~EGlaiy~~~~~~GylivSsQG~n  254 (353)
T d1h6la_         184 GMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG---------RHLTPDIEGLTIYYAADGKGYLLASSQGNS  254 (353)
T ss_dssp             EEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSS---------SSCCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred             eEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccC---------ccccCCccccEEEEcCCCCeEEEEEcCCCC
Confidence            8999998889999988877766665422211 111000000         011233445543  223  33444444689


Q ss_pred             eEEEEECCc
Q psy10662        210 IIKIYVIPI  218 (221)
Q Consensus       210 ~i~iw~~~~  218 (221)
                      +..+|+..+
T Consensus       255 ~f~vydr~~  263 (353)
T d1h6la_         255 SYAIYERQG  263 (353)
T ss_dssp             EEEEEESST
T ss_pred             eEEEEecCC
Confidence            999999865

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.13  Score=34.37  Aligned_cols=177  Identities=8%  Similarity=-0.056  Sum_probs=98.7

Q ss_pred             CCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCc---cce-eeeccccceeEEEEeC
Q psy10662         12 DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPN---CLR-SFVGHINDKNFVGLAT   85 (221)
Q Consensus        12 dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~---~~~-~~~~~~~~v~~~~~~~   85 (221)
                      ...|+-.+++ +... ..+......+.++.|.+ .+.++ +=...+.|.-.++....   ... .+......+..+++.+
T Consensus         9 ~~~I~~~~l~-~~~~-~~~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~   86 (266)
T d1ijqa1           9 RHEVRKMTLD-RSEY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW   86 (266)
T ss_dssp             BSSEEEEETT-SCCC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred             CCeEEEEECC-CCcc-eeeeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEee
Confidence            3468888987 3332 23333455678999985 44444 44456677766664321   111 1222234567888876


Q ss_pred             CCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec--CCCeEEEEEcCCC
Q psy10662         86 DGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGLS  162 (221)
Q Consensus        86 ~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~  162 (221)
                      .+.. ..+-...+.|.+.++.........             ......+..++++|...++....  ..+.|.-.++...
T Consensus        87 ~~~~lY~~d~~~~~I~v~~~~g~~~~~~~-------------~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs  153 (266)
T d1ijqa1          87 IHSNIYWTDSVLGTVSVADTKGVKRKTLF-------------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV  153 (266)
T ss_dssp             TTTEEEEEETTTTEEEEEETTSSSEEEEE-------------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred             ccceEEEEecCCCEEEeEecCCceEEEEE-------------cCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCC
Confidence            5554 455566778999988755433221             22334577889988655554433  3345555555433


Q ss_pred             CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662        163 KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI  218 (221)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~  218 (221)
                      .......               ..-....++++++.++.|+-+ ...+.|...++..
T Consensus       154 ~~~~l~~---------------~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG  195 (266)
T d1ijqa1         154 DIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  195 (266)
T ss_dssp             CEEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             ceecccc---------------cccceeeEEEeeccccEEEEecCCcCEEEEEECCC
Confidence            2221110               112345778888876655554 4567888777754

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.25  Score=32.89  Aligned_cols=158  Identities=7%  Similarity=-0.148  Sum_probs=89.8

Q ss_pred             CceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEe--cCCCeEEEEECCCCeee
Q psy10662         35 KAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACG--SENNSLYIYYKGLSKHM  110 (221)
Q Consensus        35 ~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~v~iwd~~~~~~~  110 (221)
                      ..+..|++.+  +...++-...+.|.+.++........+.........++++|...++.-.  +..+.|.-.++......
T Consensus        77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~  156 (266)
T d1ijqa1          77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  156 (266)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred             CCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCcee
Confidence            3466788764  3445566677889999987665444444445567889999866555433  23445555555433221


Q ss_pred             EEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662        111 HAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF  189 (221)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (221)
                      ..             ....-..+..+++++.++.|..+ ...+.|...++.......... .            ......
T Consensus       157 ~l-------------~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~-~------------~~~~~~  210 (266)
T d1ijqa1         157 SL-------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-D------------EKRLAH  210 (266)
T ss_dssp             EE-------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-C------------TTTTSS
T ss_pred             cc-------------cccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEe-C------------CCcccc
Confidence            11             11223456789999877766554 556788888876543322221 0            011122


Q ss_pred             eeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662        190 VSAVCWRQLSRVLVAANSQGIIKIYVIPIR  219 (221)
Q Consensus       190 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  219 (221)
                      ..++++. ++.+..+-..++.|...+..++
T Consensus       211 p~~lav~-~~~ly~td~~~~~I~~~~~~~g  239 (266)
T d1ijqa1         211 PFSLAVF-EDKVFWTDIINEAIFSANRLTG  239 (266)
T ss_dssp             EEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred             cEEEEEE-CCEEEEEECCCCeEEEEECCCC
Confidence            3456665 3344444446777777776654

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.99  E-value=0.078  Score=39.88  Aligned_cols=59  Identities=15%  Similarity=0.134  Sum_probs=43.4

Q ss_pred             CcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662         55 SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        55 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  114 (221)
                      |.+.-+|+.+++.+-....+ .++..-.+.-.+.++++|+.||.++.+|.++++.+.+++
T Consensus       466 G~l~AiD~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~  524 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ  524 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             CeEEEEcCCCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEE
Confidence            56888888888877666432 233322234457788889999999999999999998863

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.85  E-value=0.44  Score=34.40  Aligned_cols=61  Identities=7%  Similarity=-0.037  Sum_probs=38.3

Q ss_pred             cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662         76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD  141 (221)
Q Consensus        76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  141 (221)
                      ...++|+|.|+++++++--..|.|++++..+++...........     ...........++|+|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~-----~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIV-----NDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC-----CCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccc-----cccCCCCceeeEEeCCC
Confidence            35679999999998887766799999987766543322110000     00111345678999984

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.53  E-value=0.51  Score=33.70  Aligned_cols=89  Identities=13%  Similarity=0.125  Sum_probs=50.1

Q ss_pred             CCCceEEEEe-CC----CeEEEEEecCCceeeE-EEEeccCceEEEEEecCCc-EEEecC----------------CCcE
Q psy10662          1 MNSCHLAFGS-AD----HCVHYYDLRNTKEALA-VFKGHRKAVSYVKFLNKED-IVSAST----------------DSQL   57 (221)
Q Consensus         1 ~~~~~l~~~~-~d----g~i~i~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~-l~s~~~----------------d~~v   57 (221)
                      ||++++|.+- ..    ..|+++|+. +++.+. .+..  .....++|.+++. |+-...                ...|
T Consensus       134 pd~~~la~s~d~~G~e~~~l~v~Dl~-tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v  210 (430)
T d1qfma1         134 EDGEYFAYGLSASGSDWVTIKFMKVD-GAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKL  210 (430)
T ss_dssp             TTSSEEEEEEEETTCSCEEEEEEETT-TTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEE
T ss_pred             CCCCEEEEEeccccCchheeEEeccC-cceeccccccc--ccccceEEcCCCCEEEEEEeccccCcccccccccCCcceE
Confidence            6788777432 22    379999998 555443 3332  1235678886544 443221                2357


Q ss_pred             EEEEcCCCccc--eeeeccc--cceeEEEEeCCCCEEEE
Q psy10662         58 KLWNINKPNCL--RSFVGHI--NDKNFVGLATDGDYVAC   92 (221)
Q Consensus        58 ~~wd~~~~~~~--~~~~~~~--~~v~~~~~~~~~~~l~~   92 (221)
                      ..+.+.+...-  ..+....  ..+..+..++++++++.
T Consensus       211 ~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i  249 (430)
T d1qfma1         211 YYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLL  249 (430)
T ss_dssp             EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred             EEEECCCCccccccccccccCCceEEeeeccCCcceeeE
Confidence            77777665332  2222222  23556778889988653

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.22  E-value=0.63  Score=33.54  Aligned_cols=57  Identities=7%  Similarity=-0.068  Sum_probs=38.2

Q ss_pred             EEeccCceEEEEEecCCcEEEecC-CCcEEEEEcCCCcccee--e------eccccceeEEEEeCC
Q psy10662         30 FKGHRKAVSYVKFLNKEDIVSAST-DSQLKLWNINKPNCLRS--F------VGHINDKNFVGLATD   86 (221)
Q Consensus        30 ~~~~~~~i~~~~~~~~~~l~s~~~-d~~v~~wd~~~~~~~~~--~------~~~~~~v~~~~~~~~   86 (221)
                      +...-...++|+|.|++.|+.+.. .|.|++++..+++....  +      ..-......++|+|+
T Consensus        22 ia~~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          22 ILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             EECCCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            333345678999999888776665 79999998776643221  1      111345678999985

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.54  E-value=0.66  Score=31.46  Aligned_cols=160  Identities=11%  Similarity=0.155  Sum_probs=88.6

Q ss_pred             ceEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEEEEEecC-CcEE-Ee--c----CCCcEEEEEcCCCccceee
Q psy10662          4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSYVKFLNK-EDIV-SA--S----TDSQLKLWNINKPNCLRSF   71 (221)
Q Consensus         4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~~~~~~~-~~l~-s~--~----~d~~v~~wd~~~~~~~~~~   71 (221)
                      +.|+-- .+..|+-|+++....+.+.+..|..    .|..-..+++ +.++ +|  .    -.|.+.+|..+.. .-+.+
T Consensus       114 ~~L~lV-T~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~i  191 (327)
T d1utca2         114 NTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPI  191 (327)
T ss_dssp             SEEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEE
T ss_pred             CEEEEE-cCCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccc
Confidence            445544 3457999999755567778876653    3444333443 3333 22  1    2467888987654 33445


Q ss_pred             eccccceeEEEEeCCC---CEEEEe---cCCCeEEEEECCCCee-eEEEEeecccceeEeeEE---EeeCceEEEEEecC
Q psy10662         72 VGHINDKNFVGLATDG---DYVACG---SENNSLYIYYKGLSKH-MHAYRFDTVRSMLESSFV---GHINDKNFVGLATD  141 (221)
Q Consensus        72 ~~~~~~v~~~~~~~~~---~~l~~~---~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~  141 (221)
                      .+|...-..+.+.-+.   ..++-+   ...+.++|-++..... ...+     ..+...-+.   ....-.-++..++.
T Consensus       192 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f-----~kk~vdi~fppea~~DFPvamqvs~k  266 (327)
T d1utca2         192 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF-----PKKAVDVFFPPEAQNDFPVAMQISEK  266 (327)
T ss_dssp             CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCC-----CCEEEECCCCTTCTTCCEEEEEEETT
T ss_pred             cceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCC-----cceeEEEECCccccCCcEEEEEeecc
Confidence            6664433333222111   122221   2336788888765211 0000     000010011   11334557888888


Q ss_pred             CCEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662        142 GDYVACGSENNSLYIYYKGLSKHMHAYRF  170 (221)
Q Consensus       142 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~  170 (221)
                      -..+..-+.-|.+++||+.++.+++.-+.
T Consensus       267 ygiiyviTK~G~i~lyDleTgt~i~~nRI  295 (327)
T d1utca2         267 HDVVFLITKYGYIHLYDLETGTCIYMNRI  295 (327)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEecCcEEEEEEcccccEEEEeec
Confidence            88999999999999999999998876653

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.41  E-value=0.82  Score=32.13  Aligned_cols=103  Identities=14%  Similarity=0.037  Sum_probs=63.3

Q ss_pred             CceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662         35 KAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR  114 (221)
Q Consensus        35 ~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  114 (221)
                      ..|..++|+.+. ++. ..++.+..++...............++..+.++|.  .++....++.+.++++..++..... 
T Consensus        87 p~v~~vafs~d~-l~v-~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~-  161 (381)
T d1xipa_          87 PDVIFVCFHGDQ-VLV-STRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLA-  161 (381)
T ss_dssp             TTEEEEEEETTE-EEE-EESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEE-
T ss_pred             CCeEEEEeeCCE-EEE-EeCCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCcccccc-
Confidence            368889997543 333 45567888887665444443334556778887775  4556666888999998877543211 


Q ss_pred             eecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662        115 FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS  149 (221)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  149 (221)
                          .+  ...+ .-...+.+++|++.|+.++++.
T Consensus       162 ----~~--v~~~-~~~~~~~~v~ws~kgkq~v~~~  189 (381)
T d1xipa_         162 ----QN--VTSF-DVTNSQLAVLLKDRSFQSFAWR  189 (381)
T ss_dssp             ----ES--EEEE-EECSSEEEEEETTSCEEEEEEE
T ss_pred             ----CC--cceE-EecCCceEEEEeCCcEEEEEeC
Confidence                00  0011 1235577888888888777764

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=89.21  E-value=1.8  Score=27.83  Aligned_cols=204  Identities=12%  Similarity=0.035  Sum_probs=97.6

Q ss_pred             CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC--CcEEE------ecCCCcEEEEEcCCCccceeeecc
Q psy10662          3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK--EDIVS------ASTDSQLKLWNINKPNCLRSFVGH   74 (221)
Q Consensus         3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~s------~~~d~~v~~wd~~~~~~~~~~~~~   74 (221)
                      .++|+++...|.+.++-+. .++.++   -.+.+|.....-..  +++.-      |..-..+.+-++.....-..+...
T Consensus        26 d~ll~~~~seG~vni~~l~-g~~~vk---LtkePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~sp  101 (313)
T d2hu7a1          26 DKLLVVGFSEGSVNAYLYD-GGETVK---LNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAV  101 (313)
T ss_dssp             TEEEEEEEETTEEEEEEES-SSSCEE---CCSSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTTS
T ss_pred             CcEEEEEeccceEEEEEEe-CCEEEE---EecccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecCC
Confidence            3577888889999999887 444322   23445544332211  11111      111223444444322222222222


Q ss_pred             c-cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEE-ecCCCEEEEecC-C
Q psy10662         75 I-NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL-ATDGDYVACGSE-N  151 (221)
Q Consensus        75 ~-~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~-d  151 (221)
                      . -.|.+++.. +.+..++|+......+|-++.++........+  ...+..  -....|..+.+ .++.+-+.++.- .
T Consensus       102 k~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPp--FsFVtD--I~~d~I~G~g~~~g~~~sfF~adl~S  176 (313)
T d2hu7a1         102 KPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSD--IRGDLIAGLGFFGGGRVSLFTSNLSS  176 (313)
T ss_dssp             CSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEE--EETTEEEEEEEEETTEEEEEEEETTT
T ss_pred             ceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCC--cceEEe--ccCCeEEEEeeecCCcceEEEEeccc
Confidence            2 234555553 33467788877778888887776544322111  111111  11223444433 333333555554 6


Q ss_pred             CeEEEEEcCCCCceeeee--------------------eecccccccccc--c--c-cccccceeEEEEcCCCcEEEEec
Q psy10662        152 NSLYIYYKGLSKHMHAYR--------------------FDTVRSMLERDR--N--E-DDTNEFVSAVCWRQLSRVLVAAN  206 (221)
Q Consensus       152 ~~i~~~d~~~~~~~~~~~--------------------~~~~~~~~~~~~--~--~-~~~~~~v~~~~~~~~~~~l~~~~  206 (221)
                      |.+++++-..+.....+.                    ++......+.+.  .  + .-....|.-+-+.|++++++.+-
T Consensus       177 G~lri~tpkeGS~~~ay~~~gnKV~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iiak  256 (313)
T d2hu7a1         177 GGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVAR  256 (313)
T ss_dssp             EEEEEECCSSEEEEEEEECTTSCEEEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred             CCEEEecCCCCcccceeEccCceeeeccCCCCceEEEEEecccCceeeeecCcccceeecceEEEeeeeCCCCcEEEEEe
Confidence            777777655443322221                    111111111000  0  0 01123455566899999988888


Q ss_pred             CCCeEEEEE
Q psy10662        207 SQGIIKIYV  215 (221)
Q Consensus       207 ~dg~i~iw~  215 (221)
                      .||.-+++.
T Consensus       257 rdG~s~lF~  265 (313)
T d2hu7a1         257 REGRSAVFI  265 (313)
T ss_dssp             ETTEEEEEE
T ss_pred             cCCchheee
Confidence            899888775

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=86.58  E-value=3  Score=27.39  Aligned_cols=88  Identities=7%  Similarity=-0.007  Sum_probs=40.7

Q ss_pred             CCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEE
Q psy10662         11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYV   90 (221)
Q Consensus        11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l   90 (221)
                      .||.|..|-....+++ -.-......|..+.--....++.  .|+.+..|.-...............+..++....  ..
T Consensus        42 ~dG~v~~wG~N~~GQl-G~~~~~~~~v~~v~~G~~~~~al--~dg~v~~wG~~~~gq~~~~~~~~~~~~~i~~~~~--~~  116 (273)
T d1jtdb_          42 KGGKVLGWGANLNGQL-TMPAATQSGVDAIAAGNYHSLAL--KDGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--AS  116 (273)
T ss_dssp             ETTEEEEEECCTTSTT-SCCGGGGSCCCEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEEETT--EE
T ss_pred             ECCEEEEEeCCCCCce-eeeecccccceEEecCCCceeee--eeeeeeccCCCcceeeccccccccceeEEeeecc--cc
Confidence            3788888876533332 11111233455554322222332  4788999976432221111112233444444322  22


Q ss_pred             EEecCCCeEEEEEC
Q psy10662         91 ACGSENNSLYIYYK  104 (221)
Q Consensus        91 ~~~~~d~~v~iwd~  104 (221)
                      +. -.|+.+..|.-
T Consensus       117 ~~-~~dg~v~~~g~  129 (273)
T d1jtdb_         117 YA-LKDGKVIAWGD  129 (273)
T ss_dssp             EE-EETTEEEEEEC
T ss_pred             cc-cccccceeccc
Confidence            22 24788888853

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=86.02  E-value=3.9  Score=28.25  Aligned_cols=149  Identities=10%  Similarity=0.127  Sum_probs=85.5

Q ss_pred             CeEEEEEecCCceeeEEEEec-------cCceEEEEE--ec-CC--cEEEecCCCcEEEEEcCC---C----ccceeeec
Q psy10662         13 HCVHYYDLRNTKEALAVFKGH-------RKAVSYVKF--LN-KE--DIVSASTDSQLKLWNINK---P----NCLRSFVG   73 (221)
Q Consensus        13 g~i~i~~~~~~~~~~~~~~~~-------~~~i~~~~~--~~-~~--~l~s~~~d~~v~~wd~~~---~----~~~~~~~~   73 (221)
                      ..|.+|.+......+..+...       ...+..+|.  ++ ++  +++....+|.+..|.+..   +    +.++.+. 
T Consensus        99 ~~l~~~~id~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-  177 (353)
T d1h6la_          99 NTIEIYAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-  177 (353)
T ss_dssp             CEEEEEEEETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-
T ss_pred             eeEEEEEecCcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-
Confidence            368888886433333333221       224677777  34 33  356777899999887732   2    2334443 


Q ss_pred             cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE--EeeCceEEEEEe--c--CCCEEEE
Q psy10662         74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV--GHINDKNFVGLA--T--DGDYVAC  147 (221)
Q Consensus        74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~--~--~~~~l~~  147 (221)
                      ....+..|.+.+....|+.+-++.-+..++.......        ....+....  .....+-.++.-  +  +|-+|++
T Consensus       178 ~~~q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~--------~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivS  249 (353)
T d1h6la_         178 MNSQTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGS--------NGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLAS  249 (353)
T ss_dssp             CSSCEEEEEEETTTTEEEEEETTTEEEEEESSTTSCS--------CCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEE
T ss_pred             CCCccceEEEeCCCCcEEEecCccceEEEEeccCCCc--------cceeeecccCccccCCccccEEEEcCCCCeEEEEE
Confidence            3457889999998889999988876666665321100        001111111  123455566643  2  3334555


Q ss_pred             ecCCCeEEEEEcCCC-Cceeeeee
Q psy10662        148 GSENNSLYIYYKGLS-KHMHAYRF  170 (221)
Q Consensus       148 ~~~d~~i~~~d~~~~-~~~~~~~~  170 (221)
                      .-.+++..+||.... ..+..+..
T Consensus       250 sQG~n~f~vydr~~~~~~~g~F~i  273 (353)
T d1h6la_         250 SQGNSSYAIYERQGQNKYVADFQI  273 (353)
T ss_dssp             EGGGTEEEEEESSTTCCEEEEEEE
T ss_pred             cCCCCeEEEEecCCCccccceEEE
Confidence            556789999998764 56666654

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.59  E-value=4.6  Score=26.26  Aligned_cols=22  Identities=18%  Similarity=0.265  Sum_probs=15.6

Q ss_pred             CCcEEEEecCCC-----eEEEEECCcc
Q psy10662        198 LSRVLVAANSQG-----IIKIYVIPIR  219 (221)
Q Consensus       198 ~~~~l~~~~~dg-----~i~iw~~~~~  219 (221)
                      ++++++.|+.++     .+.+||+.+.
T Consensus       242 ~~~l~v~GG~~~~~~~~~v~~yd~~~~  268 (288)
T d1zgka1         242 QGRIYVLGGYDGHTFLDSVECYDPDTD  268 (288)
T ss_dssp             TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             CCEEEEEecCCCCeecceEEEEECCCC
Confidence            678888776543     3778888764