Psyllid ID: psy10829

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-----

MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDWSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFVDLPAPQRPGYSASTMYK

cccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccEEEccccccccEEEEEccccccccccccccHHHHHccccHHHHHHHHHHHHcccccccccccHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccHHcHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccc

cccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHcccccccEEEEccccEEEccccEEEEEEHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEEEEccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccEEcccEccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccEcccccccccHHHHHHHHHHHcccccccccccccccccccccccccccc

maslfpdsktfvdmklkhtpdTTWRMFNELMnqtenrpsrsELEQFVNETFDeagsefedwspsdwvesprflskiKDKNFQEWASQLNALWKFLGRkmkddvrlhqdqysiiyvphpvivpggrfrefyywdsYWIIRGLILSEMFHTVKGMLGNFLSIVEEygfipnggRVYYAmrsqpplliPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRttkvekdgqfynlcqfkefssgprpesyredvtsAQIFRSEVEKEAHYSELKSAaesgwdfssrwfvlngtnkgksgegnltnlkarsivpvdLNAIIYWNADLLSQFYNTlgqgnkslhYSNVAKEWLEAVTKVLWHDEVgvwldydisneikrdyfypsnlsplwtgcynqsdTEHYISKVMKYLEKTQIMVNLggipttlehsgeqwdypnawpplQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEkydatvpgghggggeyEIQLGFGWTNGVIMELLDKFSdrlsledkfvdlpapqrpgysastmyk

maslfpdsktfvdmklkhtpDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAgsefedwspsdWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSiiyvphpvivpgGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKefssgprpesyrEDVTSAQIFRSEVEKEAHYSELKSAaesgwdfsSRWFVLNGTnkgksgegnltnlkarsIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEdkfvdlpapqrpgysastmyk

MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDWSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEKYDATVPgghggggEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFVDLPAPQRPGYSASTMYK

***********************WRM**************************************DWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKE**************************************SGWDFSSRWFVLNGTNK*****GNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFV*****************

MASLFPDSKTFVDMKLKHTPDTTWRMFNELMN*******RSELEQFVNETFDEAGSEFEDWSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRL*QD*YSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEKYDATVPG*HGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSL**********************

MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDWSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKEF************VTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFVDLPAPQRPG********

****FPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDWSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLS***********************

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MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDWSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPPLLIPMVKSxxxxxxxxxxxxxxxxxxxxxFLFWMNNRTTKVEKDGQFYNLCQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFVDLPAPQRPGYSASTMYK

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		545	2.2.26 [Sep-21-2011]
A8J4S9		626	Trehalase OS=Apis mellife	yes	N/A	0.959	0.835	0.653	0.0
Q9W2M2		596	Trehalase OS=Drosophila m	yes	N/A	0.943	0.862	0.522	1e-156
Q8MMG9		585	Trehalase OS=Pimpla hypoc	N/A	N/A	0.939	0.875	0.475	1e-147
P19813		578	Trehalase OS=Oryctolagus	yes	N/A	0.937	0.884	0.482	1e-144
O43280		583	Trehalase OS=Homo sapiens	yes	N/A	0.954	0.891	0.473	1e-141
P32359		555	Trehalase OS=Tenebrio mol	N/A	N/A	0.939	0.922	0.470	1e-141
Q9JLT2		576	Trehalase OS=Mus musculus	yes	N/A	0.954	0.902	0.460	1e-136
P32358		579	Trehalase OS=Bombyx mori	N/A	N/A	0.954	0.898	0.432	1e-133
Q54QZ5		594	Trehalase OS=Dictyosteliu	yes	N/A	0.943	0.865	0.404	1e-108
Q9FWC1		563	Probable trehalase OS=Ory	yes	N/A	0.858	0.831	0.371	3e-93

>sp\|A8J4S9\|TREA_APIME Trehalase OS=Apis mellifera PE=1 SV=1	Back alignment and function desciption

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/528 (65%), Positives = 430/528 (81%), Gaps = 5/528 (0%)

Query: 1   MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFED 60
           MAS++ DSKTFVDMK+K  PD T + F E M + E  P+R ++E+FVN+TFD  GSEFED
Sbjct: 57  MASIYKDSKTFVDMKMKRPPDETLKSFREFMERHEQMPTRYQIERFVNDTFDPEGSEFED 116

Query: 61  WSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVI 120
           W P DW   P+FLS+I D + + +AS+LN +WK LGRKMKDDVR++++ YSIIYVPHPVI
Sbjct: 117 WDPDDWTFRPKFLSRILDDDLRNFASELNGIWKMLGRKMKDDVRVNEELYSIIYVPHPVI 176

Query: 121 VPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQ 180
           VPGGRFREFYYWDSYWI++GL+LSEM+ TVKGML NF+S+V++ GFIPNGGR+YY MRSQ
Sbjct: 177 VPGGRFREFYYWDSYWIVKGLLLSEMYTTVKGMLTNFVSLVDKIGFIPNGGRIYYTMRSQ 236

Query: 181 PPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKEFSS 240
           PP+LIPMV  Y+  T+D ++L  ++  LEKEF FWM NRT ++E DG  Y L ++ E SS
Sbjct: 237 PPMLIPMVDEYLKITHDYEWLENNLYLLEKEFDFWMTNRTVEIEVDGVNYVLARYNEQSS 296

Query: 241 GPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNL 300
           GPRPESY+ED  ++Q FR+  EK+ +YSELK+AAESGWDFSSRWF+L+GTNK     GNL
Sbjct: 297 GPRPESYKEDYLTSQSFRTNEEKDNYYSELKTAAESGWDFSSRWFILDGTNK-----GNL 351

Query: 301 TNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEV 360
           TNLK R I+PVDLN+IIY NA LL+Q+   +G  +K  +Y   A EW  A+  VLWHDEV
Sbjct: 352 TNLKTRYIIPVDLNSIIYRNAVLLAQYNQRMGNESKVAYYQKRAAEWKRAIQAVLWHDEV 411

Query: 361 GVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPT 420
           G WLDYDI N+IKRDYFYP+N+ PLWT CY+ +  E Y+SKV+KYLEK +IM+NLGGIPT
Sbjct: 412 GAWLDYDILNDIKRDYFYPTNILPLWTDCYDIAKREEYVSKVLKYLEKNKIMLNLGGIPT 471

Query: 421 TLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMY 480
           TLEHSGEQWDYPNAWPPLQY +IM L+ T D WAQ LAYE++ERWVR+N+KA+NETH+M+
Sbjct: 472 TLEHSGEQWDYPNAWPPLQYFVIMALNKTEDPWAQRLAYEISERWVRSNYKAYNETHSMF 531

Query: 481 EKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFV 528
           EKYDATV GGHGGGGEYE+QLGFGW+NGVIM+LL+++ D+L+ ED+FV
Sbjct: 532 EKYDATVSGGHGGGGEYEVQLGFGWSNGVIMDLLNRYGDKLTAEDRFV 579

Apis mellifera (taxid: 7460)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 8

>sp\|Q9W2M2\|TREA_DROME Trehalase OS=Drosophila melanogaster GN=Treh PE=1 SV=1	Back alignment and function description

>sp\|Q8MMG9\|TREA_PIMHY Trehalase OS=Pimpla hypochondriaca GN=tre1 PE=1 SV=1	Back alignment and function description

>sp\|P19813\|TREA_RABIT Trehalase OS=Oryctolagus cuniculus GN=TREH PE=1 SV=1	Back alignment and function description

>sp\|O43280\|TREA_HUMAN Trehalase OS=Homo sapiens GN=TREH PE=1 SV=2	Back alignment and function description

>sp\|P32359\|TREA_TENMO Trehalase OS=Tenebrio molitor PE=2 SV=1	Back alignment and function description

>sp\|Q9JLT2\|TREA_MOUSE Trehalase OS=Mus musculus GN=Treh PE=2 SV=1	Back alignment and function description

>sp\|P32358\|TREA_BOMMO Trehalase OS=Bombyx mori PE=1 SV=1	Back alignment and function description

>sp\|Q54QZ5\|TREA_DICDI Trehalase OS=Dictyostelium discoideum GN=treh PE=3 SV=1	Back alignment and function description

>sp\|Q9FWC1\|TRE_ORYSJ Probable trehalase OS=Oryza sativa subsp. japonica GN=Os10g0521000 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		545
410718533		636	membrane-bound trehalase [Bemisia tabaci	0.965	0.827	0.734	0.0
328724079		659	PREDICTED: trehalase-like isoform 2 [Acy	0.965	0.798	0.691	0.0
193657159		625	PREDICTED: trehalase-like isoform 1 [Acy	0.965	0.841	0.691	0.0
389889253		618	membrane-bound trehalase [Laodelphax str	0.985	0.868	0.682	0.0
225219832		616	membrane-bound trehalase [Nilaparvata lu	0.955	0.845	0.688	0.0
397560824		613	membrane-bound trehalase [Sogatella furc	0.979	0.871	0.669	0.0
256708539		665	membrane-bound trehalase [Nilaparvata lu	0.955	0.783	0.684	0.0
350413681		663	PREDICTED: trehalase-like [Bombus impati	0.976	0.802	0.646	0.0
340710210		662	PREDICTED: trehalase-like [Bombus terres	0.985	0.811	0.645	0.0
383852195		666	PREDICTED: trehalase-like [Megachile rot	0.959	0.785	0.657	0.0

>gi\|410718533\|gb\|AFV79627.1\| membrane-bound trehalase [Bemisia tabaci]	Back alignment and taxonomy information

 Score =  828 bits (2140), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/531 (73%), Positives = 460/531 (86%), Gaps = 5/531 (0%)

Query: 1   MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFED 60
           MA L+ DSKTFVDMK+K +P+ T  MF ELM +TE+RPSR +LE FVNETF+  GSEFE 
Sbjct: 50  MAGLYHDSKTFVDMKMKFSPNETVGMFAELMKRTESRPSRLQLELFVNETFEPPGSEFEA 109

Query: 61  WSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVI 120
           W PSDWV++P FL ++KDK   EWA+QLN LWKFLGRKM+DD++ H D YSIIYVP+PVI
Sbjct: 110 WDPSDWVQTPGFLGRVKDKELSEWAAQLNDLWKFLGRKMRDDIKHHPDLYSIIYVPNPVI 169

Query: 121 VPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQ 180
           VPGGRFREFYYWDSYWIIRGL+LSEM+HTV+GML NFL+IVEEYG IPNGGRVYYA RS 
Sbjct: 170 VPGGRFREFYYWDSYWIIRGLLLSEMYHTVRGMLENFLTIVEEYGLIPNGGRVYYAKRSH 229

Query: 181 PPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKEFSS 240
           PPLLIPMVKSY+D T ++ FL  +IDT+EKEFLFWM N T KVEK+G+FY L ++K+ SS
Sbjct: 230 PPLLIPMVKSYLDTTKNITFLRANIDTMEKEFLFWMTNHTVKVEKNGKFYTLARYKDSSS 289

Query: 241 GPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNL 300
           GPRPESYRED  SAQIFRS+ EKE++YSELKSAAESGWDFSSRWFVLNGTNK     GNL
Sbjct: 290 GPRPESYREDYMSAQIFRSDKEKESYYSELKSAAESGWDFSSRWFVLNGTNK-----GNL 344

Query: 301 TNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEV 360
           TN K   ++PV+LNAI+YWNA LLS+F+ TLGQ  K++ Y  ++K+W+EAVT+VLWHDEV
Sbjct: 345 TNAKTTYLLPVELNAILYWNAVLLSEFFRTLGQAEKAIKYEELSKDWMEAVTEVLWHDEV 404

Query: 361 GVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPT 420
           G WLDYDI NE+KRDYFYP+N+SPLWTGC+ ++ TE++ +KVMKYLEKTQIMVNLGGIPT
Sbjct: 405 GAWLDYDIVNEVKRDYFYPTNISPLWTGCFEKNKTEYFTAKVMKYLEKTQIMVNLGGIPT 464

Query: 421 TLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMY 480
           TLEHSGEQWDYPNAWPPLQYIMIM L +T D WAQDLAYEM+ERWVR+NFKA+NET  MY
Sbjct: 465 TLEHSGEQWDYPNAWPPLQYIMIMSLDATGDSWAQDLAYEMSERWVRSNFKAYNETGIMY 524

Query: 481 EKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFVDLP 531
           EKYDATVPGGHGGGGEYE+Q+GFGWTNG+IMELLDK+ +R++ ED+F++ P
Sbjct: 525 EKYDATVPGGHGGGGEYEVQMGFGWTNGIIMELLDKYGERMTAEDRFIEPP 575

Source: Bemisia tabaci

Species: Bemisia tabaci

Genus: Bemisia

Family: Aleyrodidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|328724079\|ref\|XP_003248025.1\| PREDICTED: trehalase-like isoform 2 [Acyrthosiphon pisum] gi\|328724081\|ref\|XP_003248026.1\| PREDICTED: trehalase-like isoform 3 [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|193657159\|ref\|XP_001949459.1\| PREDICTED: trehalase-like isoform 1 [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|389889253\|gb\|AFL03410.1\| membrane-bound trehalase [Laodelphax striatella]	Back alignment and taxonomy information

>gi\|225219832\|gb\|ACN85421.1\| membrane-bound trehalase [Nilaparvata lugens]	Back alignment and taxonomy information

>gi\|397560824\|gb\|AFO54713.1\| membrane-bound trehalase [Sogatella furcifera]	Back alignment and taxonomy information

>gi\|256708539\|gb\|ACV20872.1\| membrane-bound trehalase [Nilaparvata lugens]	Back alignment and taxonomy information

>gi\|350413681\|ref\|XP_003490073.1\| PREDICTED: trehalase-like [Bombus impatiens]	Back alignment and taxonomy information

>gi\|340710210\|ref\|XP_003393687.1\| PREDICTED: trehalase-like [Bombus terrestris]	Back alignment and taxonomy information

>gi\|383852195\|ref\|XP_003701614.1\| PREDICTED: trehalase-like [Megachile rotundata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		545
FB\|FBgn0003748		596	Treh "Trehalase" [Drosophila m	0.937	0.857	0.516	2.7e-148
UNIPROTKB\|E1B8N4		579	TREH "Uncharacterized protein"	0.937	0.882	0.481	3.3e-134
UNIPROTKB\|E9PLW7		577	TREH "Trehalase" [Homo sapiens	0.939	0.887	0.469	6.9e-134
UNIPROTKB\|O43280		583	TREH "Trehalase" [Homo sapiens	0.939	0.878	0.469	6.9e-134
UNIPROTKB\|P19813		578	TREH "Trehalase" [Oryctolagus	0.937	0.884	0.478	1.4e-133
ZFIN\|ZDB-GENE-070912-84		583	treh "trehalase (brush-border	0.943	0.881	0.468	1e-132
UNIPROTKB\|E2RQS0		575	TREH "Uncharacterized protein"	0.935	0.886	0.476	1.9e-131
MGI\|MGI:1926230		576	Treh "trehalase (brush-border	0.939	0.888	0.459	2.5e-129
UNIPROTKB\|G3V7Q9		576	Treh "Trehalase (Brush-border	0.939	0.888	0.459	8.4e-129
UNIPROTKB\|I3LIR5		561	TREH "Uncharacterized protein"	0.565	0.549	0.492	4.3e-128

FB\|FBgn0003748 Treh "Trehalase" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

 Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
 Identities = 269/521 (51%), Positives = 362/521 (69%)

Query:     4 LFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDWSP 63
             LF DSKTFVDMKL ++PD T   FN +M      PS  +L+QFV++ F   G+E E W+P
Sbjct:    72 LFADSKTFVDMKLNNSPDKTLEDFNAMMEAKNQTPSSEDLKQFVDKYFSAPGTELEKWTP 131

Query:    64 SDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPG 123
             +DW E+P FL  I D + ++W  +LN++WK LGRKMKD+V  + + YSII VP+PVIVPG
Sbjct:   132 TDWKENPSFLDLISDPDLKQWGVELNSIWKDLGRKMKDEVSKNPEYYSIIPVPNPVIVPG 191

Query:   124 GRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPPL 183
             GRF EFYYWDSYWIIRGL+ S+MF T +GM+ NF SIV  +GFIPNGGRVYY  RSQPPL
Sbjct:   192 GRFIEFYYWDSYWIIRGLLYSQMFDTARGMIENFFSIVNRFGFIPNGGRVYYHGRSQPPL 251

Query:   184 LIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVEKDGQFYNLCQFKEFSSGPR 243
             L  MVKSY+D TND +F  +++DTLE EF F++NN    V+     ++LC +++ SSGPR
Sbjct:   252 LTGMVKSYVDFTNDDKFAIDALDTLEHEFEFFVNNHNVTVKN----HSLCVYRDSSSGPR 307

Query:   244 PESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVL-NGTNKGKSGEGNLTN 302
             PESYREDV + + F ++  KE HYSELK+ AESG DFSSRWF+   GTN     +GN + 
Sbjct:   308 PESYREDVETGEEFPTDEAKELHYSELKAGAESGMDFSSRWFISPTGTN-----DGNRSA 362

Query:   303 LKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGV 362
             L   SIVPVDLNA +YWNA L+++F++  G   K   Y   A++ L  + +VLW++E GV
Sbjct:   363 LSTTSIVPVDLNAYLYWNAKLIAEFHSKAGNTKKVTEYETKAEKLLLGIQEVLWNEEAGV 422

Query:   363 WLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTL 422
             WLDYD+ N+  RDY+ P+NLSPLW   +N S++E   + VM Y+E+ ++    GG+P TL
Sbjct:   423 WLDYDMINQKPRDYYTPTNLSPLWVKAFNISESEKISASVMAYIERNKLDSFPGGVPNTL 482

Query:   423 EHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYEK 482
              ++GEQWD PN W P+QYI++ GL++ N   A++++ +   RWV+ NF AF++   MYEK
Sbjct:   483 SYTGEQWDAPNVWAPMQYILVEGLNNLNTPEAKNMSLKWATRWVKTNFAAFSKDRHMYEK 542

Query:   483 YDATVPXXXXXXXEYEIQLGFGWTNGVIMELLDKFSDRLSL 523
             Y+A          EYE+Q GFGW+NGVI+E L K    +S+
Sbjct:   543 YNADEFGVGGGGGEYEVQTGFGWSNGVIIEWLSKHGRDISI 583

GO:0004555 "alpha,alpha-trehalase activity" evidence=ISS;TAS

GO:0046658 "anchored to plasma membrane" evidence=ISS

GO:0005991 "trehalose metabolic process" evidence=ISS

GO:0015927 "trehalase activity" evidence=IMP

UNIPROTKB\|E1B8N4 TREH "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|E9PLW7 TREH "Trehalase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|O43280 TREH "Trehalase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|P19813 TREH "Trehalase" [Oryctolagus cuniculus (taxid:9986)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070912-84 treh "trehalase (brush-border membrane glycoprotein)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RQS0 TREH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

MGI\|MGI:1926230 Treh "trehalase (brush-border membrane glycoprotein)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|G3V7Q9 Treh "Trehalase (Brush-border membrane glycoprotein)" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|I3LIR5 TREH "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A8J4S9	TREA_APIME	3, ., 2, ., 1, ., 2, 8	0.6534	0.9596	0.8354	yes	N/A
Q83RP6	TREA_SHIFL	3, ., 2, ., 1, ., 2, 8	0.3107	0.9009	0.8690	yes	N/A
B7NUW3	TREA_ECO7I	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
B5BI56	TREA_SALPK	3, ., 2, ., 1, ., 2, 8	0.3243	0.9027	0.8631	yes	N/A
B5R2X4	TREA_SALEP	3, ., 2, ., 1, ., 2, 8	0.3243	0.9027	0.8631	yes	N/A
B4TXW7	TREA_SALSV	3, ., 2, ., 1, ., 2, 8	0.3207	0.9027	0.8631	yes	N/A
Q0T5J8	TREA_SHIF8	3, ., 2, ., 1, ., 2, 8	0.3152	0.8990	0.8672	yes	N/A
Q83PS8	TREF_SHIFL	3, ., 2, ., 1, ., 2, 8	0.3182	0.8568	0.8506	yes	N/A
A9MVX4	TREA_SALPB	3, ., 2, ., 1, ., 2, 8	0.3261	0.9027	0.8631	yes	N/A
A1AAC5	TREA_ECOK1	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
Q8ZP20	TREA_SALTY	3, ., 2, ., 1, ., 2, 8	0.3225	0.9027	0.8631	yes	N/A
B7MK99	TREA_ECO45	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
A7ZZD1	TREA_ECOHS	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
Q54QZ5	TREA_DICDI	3, ., 2, ., 1, ., 2, 8	0.4048	0.9431	0.8653	yes	N/A
P19813	TREA_RABIT	3, ., 2, ., 1, ., 2, 8	0.4827	0.9376	0.8840	yes	N/A
C0Q337	TREA_SALPC	3, ., 2, ., 1, ., 2, 8	0.3225	0.9027	0.8631	yes	N/A
A8AFT6	TREA_CITK8	3, ., 2, ., 1, ., 2, 8	0.3218	0.8880	0.8491	yes	N/A
B1XAN8	TREA_ECODH	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
Q5PI73	TREA_SALPA	3, ., 2, ., 1, ., 2, 8	0.3243	0.9027	0.8631	yes	N/A
Q32H09	TREA_SHIDS	3, ., 2, ., 1, ., 2, 8	0.3134	0.8972	0.8654	yes	N/A
A7ZKW9	TREA_ECO24	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
B5F4F0	TREA_SALA4	3, ., 2, ., 1, ., 2, 8	0.3225	0.9027	0.8631	yes	N/A
Q0TIH3	TREA_ECOL5	3, ., 2, ., 1, ., 2, 8	0.3170	0.8972	0.8654	yes	N/A
Q8CW46	TREA_ECOL6	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
B5FTN7	TREA_SALDC	3, ., 2, ., 1, ., 2, 8	0.3243	0.9027	0.8631	yes	N/A
B7LXB1	TREA_ECO8A	3, ., 2, ., 1, ., 2, 8	0.3134	0.8972	0.8654	yes	N/A
B7UQ86	TREA_ECO27	3, ., 2, ., 1, ., 2, 8	0.3170	0.8972	0.8654	yes	N/A
O43280	TREA_HUMAN	3, ., 2, ., 1, ., 2, 8	0.4735	0.9541	0.8919	yes	N/A
Q9W2M2	TREA_DROME	3, ., 2, ., 1, ., 2, 8	0.5229	0.9431	0.8624	yes	N/A
B5R904	TREA_SALG2	3, ., 2, ., 1, ., 2, 8	0.3243	0.9027	0.8631	yes	N/A
C4ZTN8	TREA_ECOBW	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
B6I9Q8	TREA_ECOSE	3, ., 2, ., 1, ., 2, 8	0.3134	0.8972	0.8654	yes	N/A
Q9SU50	TRE1_ARATH	3, ., 2, ., 1, ., 2, 8	0.3612	0.9302	0.8099	yes	N/A
B4SUI9	TREA_SALNS	3, ., 2, ., 1, ., 2, 8	0.3243	0.9027	0.8631	yes	N/A
Q9FWC1	TRE_ORYSJ	3, ., 2, ., 1, ., 2, 8	0.3712	0.8587	0.8312	yes	N/A
B1IU96	TREA_ECOLC	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
Q3YWJ3	TREF_SHISS	3, ., 2, ., 1, ., 2, 8	0.3182	0.8568	0.8506	yes	N/A
Q1RCP3	TREA_ECOUT	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
B7N408	TREA_ECOLU	3, ., 2, ., 1, ., 2, 8	0.3134	0.8972	0.8654	yes	N/A
Q9JLT2	TREA_MOUSE	3, ., 2, ., 1, ., 2, 8	0.4603	0.9541	0.9027	yes	N/A
B7LGV7	TREA_ECO55	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
B1LHA4	TREA_ECOSM	3, ., 2, ., 1, ., 2, 8	0.3152	0.8972	0.8654	yes	N/A
Q57NL6	TREA_SALCH	3, ., 2, ., 1, ., 2, 8	0.3207	0.9027	0.8631	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1.28	0.946
3rd Layer	3.2.1	0.963

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		545
pfam01204		509	pfam01204, Trehalase, Trehalase	0.0
PLN02567		554	PLN02567, PLN02567, alpha,alpha-trehalase	1e-169
COG1626		558	COG1626, TreA, Neutral trehalase [Carbohydrate tra	1e-97
PRK13271		569	PRK13271, treA, trehalase; Provisional	9e-83
PRK13272		542	PRK13272, treA, trehalase; Provisional	5e-82
PRK13270		549	PRK13270, treF, trehalase; Provisional	9e-81

>gnl\|CDD\|216362 pfam01204, Trehalase, Trehalase	Back alignment and domain information

 Score =  638 bits (1648), Expect = 0.0
 Identities = 238/518 (45%), Positives = 322/518 (62%), Gaps = 11/518 (2%)

Query: 3   SLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDWS 62
            LFPDSKTFVDM LK+ P+   R+F         R +  +L  FV++ FDE G E   + 
Sbjct: 1   KLFPDSKTFVDMPLKNDPNRILRLFRAQFWDLTRRITGFDLRAFVDDNFDEPGDELRIYV 60

Query: 63  PSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVP 122
           P DW E P FL+KI+D + + WA  L+ALW  L RK+K  V L  +  S++ VP+P +VP
Sbjct: 61  PPDWKEQPEFLAKIEDPSLRLWAEHLHALWPALVRKVKKKVGLLPEASSLLPVPNPFVVP 120

Query: 123 GGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQPP 182
           GGRFREFYYWDSYWII GL+ S M  T +GM+ NF+ ++++YGFIPNG R YY  RSQPP
Sbjct: 121 GGRFREFYYWDSYWIILGLLASGMHDTARGMVENFIYLIDKYGFIPNGNRSYYLNRSQPP 180

Query: 183 LLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWM-NNRTTKVEKDGQFYNLCQFKEFSSG 241
            L  MV  Y + T D   +   +  L+KE+ FWM   R   V      Y L ++ +    
Sbjct: 181 FLTLMVLLYYEKTEDDALVRRYLPALKKEYAFWMAEPRLDPVTGLSDGYLLNRYGDPPET 240

Query: 242 PRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLT 301
           PRPESYREDV +A+   +E  K  +Y +LKSAAESGWDFSSRWF  +G +      G L+
Sbjct: 241 PRPESYREDVETAEKLPTERPKAYNYRDLKSAAESGWDFSSRWFRDSGHDT-----GYLS 295

Query: 302 NLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVG 361
           +++  SIVPVDLNA++Y N  +++ FY+ LG    S  +   A+   +A+ K LW++E G
Sbjct: 296 SIRTTSIVPVDLNALLYKNEKIIAFFYDVLGDSETSAIWEERAEARRDAIDKYLWNEEDG 355

Query: 362 VWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTT 421
           +W DYD+  +  R+YF  SN  PLW G  +       ++KV+ YLE++ ++V  GGIPT+
Sbjct: 356 IWYDYDLKKQKHRNYFSASNFVPLWAGLASPDQAAK-VAKVLPYLERSGLLVYPGGIPTS 414

Query: 422 LEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKAFNETHAMYE 481
           L  SG+QWDYPN W PLQ++ + GL         +LA  +  RW+  N KAF +T  M E
Sbjct: 415 LLKSGQQWDYPNGWAPLQHLAVEGLRRYGY---DELAERLAYRWLFTNTKAFVDTGKMVE 471

Query: 482 KYDATVPGGHG-GGGEYEIQLGFGWTNGVIMELLDKFS 518
           KYD T  G +G GGGEY +Q GFGWTNGV ++LLD + 
Sbjct: 472 KYDVTRGGEYGNGGGEYVVQEGFGWTNGVYLDLLDLYG 509

Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. Length = 509

>gnl\|CDD\|215307 PLN02567, PLN02567, alpha,alpha-trehalase	Back alignment and domain information

>gnl\|CDD\|224541 COG1626, TreA, Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|237326 PRK13271, treA, trehalase; Provisional	Back alignment and domain information

>gnl\|CDD\|183936 PRK13272, treA, trehalase; Provisional	Back alignment and domain information

>gnl\|CDD\|183934 PRK13270, treF, trehalase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		545
PLN02567		554	alpha,alpha-trehalase	100.0
PF01204		512	Trehalase: Trehalase; InterPro: IPR001661 O-Glycos	100.0
PRK13271		569	treA trehalase; Provisional	100.0
PRK13270		549	treF trehalase; Provisional	100.0
PRK13272		542	treA trehalase; Provisional	100.0
KOG0602\|consensus		600		100.0
COG1626		558	TreA Neutral trehalase [Carbohydrate transport and	100.0
PRK10137		786	alpha-glucosidase; Provisional	100.0
PF03200		801	Glyco_hydro_63: Mannosyl oligosaccharide glucosida	100.0
KOG2161\|consensus		849		99.98
PF06202		370	GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR	99.97
COG3408		641	GDB1 Glycogen debranching enzyme [Carbohydrate tra	99.96
TIGR01561		575	gde_arch glycogen debranching enzyme, archaeal typ	99.91
TIGR01531		1464	glyc_debranch glycogen debranching enzymye. glycog	99.86
TIGR01577		616	oligosac_amyl oligosaccharide amylase. The name of	99.69
PF05592		509	Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int	99.61
PLN02703		618	beta-fructofuranosidase	99.28
PLN03005		550	beta-fructofuranosidase	99.28
PLN02973		571	beta-fructofuranosidase	99.21
PF04685		365	DUF608: Protein of unknown function, DUF608; Inter	99.18
COG3387		612	SGA1 Glucoamylase and related glycosyl hydrolases	99.16
PF12899		436	Glyco_hydro_100: Alkaline and neutral invertase; I	98.91
TIGR01535		648	glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc	98.8
KOG3625\|consensus		1521		98.36
COG4354		721	Predicted bile acid beta-glucosidase [Carbohydrate	98.26
PF06824		424	DUF1237: Protein of unknown function (DUF1237); In	98.08
COG3459		1056	Cellobiose phosphorylase [Carbohydrate transport a	97.79
KOG2119\|consensus		879		97.2
COG3538		434	Uncharacterized conserved protein [Function unknow	96.25
PF00723		448	Glyco_hydro_15: Glycosyl hydrolases family 15; Int	96.18
cd00249		384	AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d	94.82
cd00249		384	AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d	93.33
PF07971		502	Glyco_hydro_92: Glycosyl hydrolase family 92; Inte	91.99
PF03632		370	Glyco_hydro_65m: Glycosyl hydrolase family 65 cent	87.48
PF07221		346	GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN	87.07
KOG2429\|consensus		622		80.25

>PLN02567 alpha,alpha-trehalase	Back alignment and domain information

Probab=100.00  E-value=5.6e-147  Score=1200.18  Aligned_cols=508  Identities=42%  Similarity=0.776  Sum_probs=480.3

Q ss_pred             CCCCCCCCCcccCCCCCCCHHHHHHHHHHhhhhc-CCCCCHHHHHHHHHhhcCCCCCCcccCCCCCCCCCc-ccccccCC
Q psy10829          1 MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQT-ENRPSRSELEQFVNETFDEAGSEFEDWSPSDWVESP-RFLSKIKD   78 (545)
Q Consensus         1 ~~~~f~DsKtfvD~~~~~~~~~il~~~~~~~~~~-~~~~~~~~l~~Fv~~~F~~~~~e~~~~~~~d~~~~p-~~~~~i~d   78 (545)
                      +++ |+||||||||+||.+|++||++|++++... ++++++++|++||++||+.||+||++|+|+||+++| +||.+|.|
T Consensus        24 ~~~-f~DsKtfvD~~~~~~~~~~l~~f~~~~~~~~~~~~~~~~l~~Fv~~~F~~~g~~l~~~~~~d~~~~p~~~l~~i~~  102 (554)
T PLN02567         24 GED-TFDPKLYVDLPLKFSLSETEKAFDALPRSNINGSVPVEELEEFVAEYFDVAGSDLLPYTPPDFVPEPPGFLPKVEN  102 (554)
T ss_pred             ccC-CCCCCccCCCCCCCCHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCCcccccCCccccccCcHhHhhhcCC
Confidence            466 999999999999999999999999999877 578899999999999999999999999999999999 79999999


Q ss_pred             hhHHHHHHHHhHHHHHhhhccccccccCCCCcccccccCCccccCCCCCccccchHHHHHHHHHhhcchhhHHHHHHHHH
Q psy10829         79 KNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFL  158 (545)
Q Consensus        79 ~~~~~~~~~i~~~W~~l~r~~~~~v~~~~~~~sli~lp~pfivPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~ml~nf~  158 (545)
                      +.+|+|+.+||.+|+.|+|+++++|.++|++|||||||||||||||||||+||||||||++||+.|+|+++|++||+||+
T Consensus       103 ~~~r~~a~~i~~lW~~L~R~~~~~v~~~~~~~sli~lp~p~iVPGgRFrE~yyWDSy~i~~GLl~s~~~~~A~~mi~Nf~  182 (554)
T PLN02567        103 PEAREWALKVHSLWKNLARKVSDSVEERPDRHTLLPLPNPVVVPGSRFREVYYWDSYWVIRGLLASKMYETAKGVVENLL  182 (554)
T ss_pred             hHHHHHHHHHHHHHHHhccccCcccccCCCcCCcccCCCCeEccCCCcCccchHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhcCCCCCCccccccCCCCCCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhCC-Ccccc-cCCceeeeeeee
Q psy10829        159 SIVEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNR-TTKVE-KDGQFYNLCQFK  236 (545)
Q Consensus       159 ~~i~~~G~IPng~r~yy~~rSQPPll~~mv~~~~~~t~D~~fl~~~~p~L~ke~~~W~~~R-~v~~~-~~G~~~~L~~Y~  236 (545)
                      ++|+++||||||+|+||++|||||||++||.+|+++|+|.+||++++|+|+|||+|||++| .|.+. .+|..++|+||+
T Consensus       183 ~~i~~~GfIPNg~R~Yyl~RSQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~~W~~~~~~v~i~~~~g~~~~L~rY~  262 (554)
T PLN02567        183 YLVDTYGFVPNGARAYYTNRSQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAFWTSGRHTVTIRDANGVVHVLSRYY  262 (554)
T ss_pred             HHHHHcCcCCCCCcccccCCCCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhcCCcceeeecCCCCcCCCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999974 45543 257677899999


Q ss_pred             cCCCCCCCchhhhhhhhhhhccChHHHHHHHHHHHHHHhcCCCCCccchhccCCCCCCCCCCCCcccccCCcccHhHHHH
Q psy10829        237 EFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLTNLKARSIVPVDLNAI  316 (545)
Q Consensus       237 ~~~~~PrpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~g~~~~~~~~~~l~~i~t~~i~pVDLNa~  316 (545)
                      +..++||||||++|++++...++..+++++|++|+++|||||||||||+. ++        .+|++|+|++|+|||||||
T Consensus       263 ~~~~~PrpEsyreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~-~~--------~~l~ti~t~~i~pVDLNa~  333 (554)
T PLN02567        263 AMWDKPRPESSRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMR-DG--------SNLTTLRTTSILPVDLNAF  333 (554)
T ss_pred             cCCCCCCCccccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhcc-cc--------ccccccccccccCccHHHH
Confidence            99999999999999999988877788999999999999999999999993 44        7899999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccccCcceEEEEEcCCCce-------------eecccccchH
Q psy10829        317 IYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIK-------------RDYFYPSNLS  383 (545)
Q Consensus       317 ly~~~~~LA~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~Dyd~~~~~~-------------~~~~~~s~~~  383 (545)
                      ||+++++||+|++++|+.+++++|+++|++++++|+++|||+++|+|+|||+.+++.             +..+++++|+
T Consensus       334 L~~~e~~LA~la~~lG~~~~a~~~~~~A~~~~~aI~~~lWdee~G~y~Dydl~~~~~~~~~~~~~~~~~~~~~~~~s~f~  413 (554)
T PLN02567        334 LLKMELDIAFFAKLLGDKATAERFLKAAKARKRAINAVLWNEEMGQWLDYWLPPNGATCQESYTWDAENQNTNVYASNFV  413 (554)
T ss_pred             HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhcCcccCeEEeeccccccccccccccccccccccCccHHHHH
Confidence            999999999999999999999999999999999999999999999999999998743             4789999999


Q ss_pred             HHhcCCCCCcchHHHHHHHHHHHHhcCccccCCCccccccCCCCcCcCCCCCchhHHHHHHHHHccCcHHHHHHHHHHHH
Q psy10829        384 PLWTGCYNQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTE  463 (545)
Q Consensus       384 PL~~g~~~~~~a~~~~~~v~~~l~~~~~l~~~gGlptsl~~sg~qWd~PnvWppl~~~~i~gL~~yG~~~~~~lA~~la~  463 (545)
                      |||+|+++++++  +++++++.|++++ +..|||||||+.++|+|||+||+|||+|||+++||++||+++|.++|.+||+
T Consensus       414 PLw~g~~~~~~~--~a~~v~~~l~~~~-l~~pgGiptsl~~sg~qWdgPn~W~pl~~l~i~GL~~yG~~ea~~lA~~la~  490 (554)
T PLN02567        414 PLWCGVVPPGDA--KVEKVVESLKSSG-LVLPAGIATSLRNTGQQWDFPNAWAPLQHMIVEGLAASGSKEGKALAEDIAR  490 (554)
T ss_pred             HHHcCCCChhhH--HHHHHHHHHHhcc-CccCCcccCCCCCccccCCCCCcCHhHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence            999999998643  4678888898755 4469999999999999999999999999999999999999888899999999


Q ss_pred             HHHHHHHHHHHhcCcceeecccCCCCCCCCCcccccCCCccchHHHHHHHHHHhhchh
Q psy10829        464 RWVRANFKAFNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRL  521 (545)
Q Consensus       464 r~l~~~~~~~~~~g~m~EkYd~~~~~~~gggGey~~q~gFGWTngv~L~ll~~~~~~~  521 (545)
                      |||++++++|.++|.|+||||+.++++.||||||++|+||||||||+|+|+.+||..-
T Consensus       491 rwl~~~~~~~~~tg~m~EkYd~~~~~~~GgGGey~~q~GFGWTngV~L~ll~~yg~~~  548 (554)
T PLN02567        491 RWLRSNYVAYKKTGAMHEKYDARYCGEVGGGGEYIPQTGFGWSNGVVLSLLEEFGWPE  548 (554)
T ss_pred             HHHHHHHHHHHhcCceEEeECCCCccccCCCCCCCCCCCcChHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999988999999999999999999999999999743

>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3	Back alignment and domain information

>PRK13271 treA trehalase; Provisional	Back alignment and domain information

>PRK13270 treF trehalase; Provisional	Back alignment and domain information

>PRK13272 treA trehalase; Provisional	Back alignment and domain information

>KOG0602\|consensus	Back alignment and domain information

>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK10137 alpha-glucosidase; Provisional	Back alignment and domain information

>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG2161\|consensus	Back alignment and domain information

>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT	Back alignment and domain information

>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative	Back alignment and domain information

>TIGR01531 glyc_debranch glycogen debranching enzymye	Back alignment and domain information

>TIGR01577 oligosac_amyl oligosaccharide amylase	Back alignment and domain information

>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes	Back alignment and domain information

>PLN02703 beta-fructofuranosidase	Back alignment and domain information

>PLN03005 beta-fructofuranosidase	Back alignment and domain information

>PLN02973 beta-fructofuranosidase	Back alignment and domain information

>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []	Back alignment and domain information

>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases	Back alignment and domain information

>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase	Back alignment and domain information

>KOG3625\|consensus	Back alignment and domain information

>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function	Back alignment and domain information

>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG2119\|consensus	Back alignment and domain information

>COG3538 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid	Back alignment and domain information

>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid	Back alignment and domain information

>PF07971 Glyco_hydro_92: Glycosyl hydrolase family 92; InterPro: IPR012939 This domain occurs within alpha-1,2-mannosidases, which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis	Back alignment and domain information

>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5	Back alignment and domain information

>KOG2429\|consensus	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		545
2jg0_A		535	Family 37 Trehalase From Escherichia Coli In Comple		4e-64
2jf4_A		535	Family 37 Trehalase From Escherichia Coli In Comple		9e-61

>pdb|2JG0|A Chain A, Family 37 Trehalase From Escherichia Coli In Complex With 1- Thiatrehazolin Length = 535

Back alignment and structure

Iteration: 1

Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 169/552 (30%), Positives = 257/552 (46%), Gaps = 63/552 (11%) Query: 2 ASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDW 61 A LFPD KTF D P + NQ S +L FVN F E E + Sbjct: 24 AKLFPDQKTFADAVPNSDPLMILADYRMQQNQ-----SGFDLRHFVNVNF-TLPKEGEKY 77 Query: 62 SPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIV 121 P + Q ++ LW L R ++ + S++ +P P +V Sbjct: 78 VPPE---------------GQSLREHIDGLWPVLTRSTENTEKWD----SLLPLPEPYVV 118 Query: 122 PGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQP 181 PGGRFRE YYWDSY+ + GL S + V M+ NF ++ YG IPNG R YY RSQP Sbjct: 119 PGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQP 178 Query: 182 PLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNN-----------RTTKVEKDGQFY 230 P MV+ D L + + ++KE+ +WM+ R K++ DG Sbjct: 179 PFFALMVELLAQHEGDAA-LKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQ-DGTLL 236 Query: 231 NLCQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGT 290 N ++ + PRPES+ ED+ +A+ + E Y +L+SAA SGWDFSSRW Sbjct: 237 N--RYWDDRDTPRPESWVEDIATAKSNPNRPATEI-YRDLRSAAASGWDFSSRWM----- 288 Query: 291 NKGKSGEGNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEA 350 L L+ SIVPVDLN++++ +L++ G + Y +A + Sbjct: 289 ----DNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKG 344 Query: 351 VTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQ 410 + K LW+D+ G + DYD+ + R+ + L PL+ + + +L Sbjct: 345 IEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHL---- 400 Query: 411 IMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANF 470 + GG+ TT SG+QWD PN W PLQ++ GL + K ++A +++ ++ Sbjct: 401 --LQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQK---EVAMDISWHFLTNVQ 455 Query: 471 KAFNETHAMYEKYDATVPXXXXXXXEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFVDL 530 ++ + EKYD + EY +Q GFGWTNGV +++LD + E ++ Sbjct: 456 HTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPK---EQPCDNV 512 Query: 531 PAPQRPGYSAST 542 PA RP ++T Sbjct: 513 PA-TRPTVKSAT 523

PyMOL of 2jg0

>pdb|2JF4|A Chain A, Family 37 Trehalase From Escherichia Coli In Complex With Validoxylamine Length = 535

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		545
2jg0_A		535	Periplasmic trehalase; family 37, hydrolase, inhib	1e-145
3c68_A		761	Uncharacterized protein YGJK; GH63, processing alp	4e-53
2z07_A		420	Putative uncharacterized protein TTHA0978; unchara	3e-43
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07

>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A* Length = 535	Back alignment and structure

 Score =  427 bits (1099), Expect = e-145
 Identities = 167/550 (30%), Positives = 254/550 (46%), Gaps = 56/550 (10%)

Query: 1   MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFED 60
            A LFPD KTF D      P      +    NQ+       +L  FVN  F     E E 
Sbjct: 23  NAKLFPDQKTFADAVPNSDPLMILADYRMQQNQSGF-----DLRHFVNVNFTLPK-EGEK 76

Query: 61  WSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVI 120
           + P +                Q     ++ LW  L R  ++         S++ +P P +
Sbjct: 77  YVPPEG---------------QSLREHIDGLWPVLTRSTENTE----KWDSLLPLPEPYV 117

Query: 121 VPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQ 180
           VPGGRFRE YYWDSY+ + GL  S  +  V  M+ NF   ++ YG IPNG R YY  RSQ
Sbjct: 118 VPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQ 177

Query: 181 PPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTT--------KVEKDGQFYNL 232
           PP    MV+       D   L + +  ++KE+ +WM+            +V K      L
Sbjct: 178 PPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLL 236

Query: 233 CQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNK 292
            ++ +    PRPES+ ED+ +A+           Y +L+SAA SGWDFSSRW        
Sbjct: 237 NRYWDDRDTPRPESWVEDIATAKSN-PNRPATEIYRDLRSAAASGWDFSSRWM------- 288

Query: 293 GKSGEGNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVT 352
                  L  L+  SIVPVDLN++++    +L++     G    +  Y  +A    + + 
Sbjct: 289 --DNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIE 346

Query: 353 KVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIM 412
           K LW+D+ G + DYD+ +   R+    + L PL+     +       +    +L +    
Sbjct: 347 KYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQP--- 403

Query: 413 VNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKA 472
              GG+ TT   SG+QWD PN W PLQ++         +   +++A +++  ++      
Sbjct: 404 ---GGLNTTSVKSGQQWDAPNGWAPLQWVATE---GLQNYGQKEVAMDISWHFLTNVQHT 457

Query: 473 FNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFVDLPA 532
           ++    + EKYD +  G  GGGGEY +Q GFGWTNGV +++LD    +    D   ++PA
Sbjct: 458 YDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCD---NVPA 514

Query: 533 PQRPGYSAST 542
            +    SA+T
Sbjct: 515 TRPTVKSATT 524

PyMOL of 2jg0

>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 420	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		545
2jg0_A		535	Periplasmic trehalase; family 37, hydrolase, inhib	100.0
2z07_A		420	Putative uncharacterized protein TTHA0978; unchara	100.0
3c68_A		761	Uncharacterized protein YGJK; GH63, processing alp	100.0
2okx_A		956	Rhamnosidase B; alpha barrel, glycoside hydrolase	99.93
3cih_A		739	Putative alpha-rhamnosidase; structural genomics,	99.86
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	99.83
3qde_A		811	Cellobiose phosphorylase; cellulase, phosphate, tr	99.73
3rrs_A		822	Cellobiose phosphorylase; GH94, alpha barrel, disa	99.72
1ulv_A		1020	Glucodextranase; GH family 15, (alpha-alpha)6-barr	99.31
1lf6_A		684	Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica	99.29
2vn4_A		599	Glucoamylase; hydrolase, carbohydrate binding, gly	98.79
2p0v_A		489	Hypothetical protein BT3781; alpha-beta protein, s	98.73
1gai_A		472	Glucoamylase-471; hydrolase, glycosidase, polysacc	98.68
2fba_A		492	Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy	98.67
3qt9_A		427	Putative uncharacterized protein CPE0426; alpha-al	98.35
3p2c_A		463	Putative glycosyl hydrolase; structural genomics,	98.35
3qry_B		426	Putative uncharacterized protein; alpha-alpha six	98.07
2ww2_A		737	Mannosidase, alpha-1,2-mannosidase; hydrolase, gly	92.72
2wvx_A		744	Mannosidase, putative alpha-1,2-mannosidase; glyco	91.4
3gt5_A		402	N-acetylglucosamine 2-epimerase; structural genomi	90.88
1h54_A		754	Maltose phosphorylase; hydrolase, maltose metaboli	90.67
2gz6_A		388	N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C	88.13
2zbl_A		421	Putative isomerase; N-acyl-D-glucosamine 2-epimera	87.24
3gt5_A		402	N-acetylglucosamine 2-epimerase; structural genomi	87.09
2xsg_A		774	Ccman5; hydrolase, mannosidase; HET: B3P; 2.00A {C	84.26

>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*	Back alignment and structure

Probab=100.00  E-value=2.5e-113  Score=941.78  Aligned_cols=476  Identities=34%  Similarity=0.641  Sum_probs=432.1

Q ss_pred             CCCCCCCCCcccCCCCCCCHHHHHHHHHHhhhhcCCCCCHHHHHHHHHhhcCCCCCCcccCCCCCCCCCcccccccCChh
Q psy10829          1 MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDWSPSDWVESPRFLSKIKDKN   80 (545)
Q Consensus         1 ~~~~f~DsKtfvD~~~~~~~~~il~~~~~~~~~~~~~~~~~~l~~Fv~~~F~~~~~e~~~~~~~d~~~~p~~~~~i~d~~   80 (545)
                      +++||+||||||||+||.+|++||++|++++..     ++++|++||++||+.||.+ +.|+|     +|       +  
T Consensus        23 ~~~~f~d~k~fvd~~~~~~~~~~~~~~~~~~~~-----~~~~l~~fv~~~f~~~~~~-~~~~~-----~~-------~--   82 (535)
T 2jg0_A           23 NAKLFPDQKTFADAVPNSDPLMILADYRMQQNQ-----SGFDLRHFVNVNFTLPKEG-EKYVP-----PE-------G--   82 (535)
T ss_dssp             HTTCSSSHHHHHTCEESSCHHHHHHHHHHHTTS-----TTCCHHHHHHHHEECCC-----CCC-----CT-------T--
T ss_pred             HccCCCCCCcCCCCcCCCCHHHHHHHHHHhhcC-----cHHHHHHHHHHhcCCCCcc-ccCCC-----Cc-------h--
Confidence            589999999999999999999999999998753     4589999999999999864 44443     22       2  


Q ss_pred             HHHHHHHHhHHHHHhhhccccccccCCCCcccccccCCccccCCCCCccccchHHHHHHHHHhhcchhhHHHHHHHHHHh
Q psy10829         81 FQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSI  160 (545)
Q Consensus        81 ~~~~~~~i~~~W~~l~r~~~~~v~~~~~~~sli~lp~pfivPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~ml~nf~~~  160 (545)
                       +.|+++||++|+.|+|+++    .+|+++||||||||||||||||+++|||||+|+++||+.+|++++|++||+||+++
T Consensus        83 -~~~~~~i~~~W~~l~r~~~----~~~~~~sli~~p~~~vvPGg~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~  157 (535)
T 2jg0_A           83 -QSLREHIDGLWPVLTRSTE----NTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHE  157 (535)
T ss_dssp             -CCHHHHHHHHTTTTEECCS----SCCTTCSBCCCSSCEECCBTTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHcCCCC----CCCCccccccCCCCcccCCccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence             3467899999999999987    56899999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCccccccCCCCCCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhCCCc----------ccccCCcee
Q psy10829        161 VEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTT----------KVEKDGQFY  230 (545)
Q Consensus       161 i~~~G~IPng~r~yy~~rSQPPll~~mv~~~~~~t~D~~fl~~~~p~L~ke~~~W~~~R~v----------~~~~~G~~~  230 (545)
                      |+++|+||||+|+||++|||||+|++||.+|+++++ .+||++++|.|+++|+||+++|+.          ....+|.  
T Consensus       158 ~~~~G~IPng~r~yY~~~sqPPl~~~~v~~~~~~~~-~~fL~~~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~--  234 (535)
T 2jg0_A          158 IDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEG-DAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGT--  234 (535)
T ss_dssp             HHHHSSCCSBSBGGGTTCCCSCCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSC--
T ss_pred             hccCCcccCCCCccCCCCCCccHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHhCCcccCccccccceeecCCCC--
Confidence            999999999999999999999999999999999886 499999999999999999999862          1112454  


Q ss_pred             eeeeeecCCCCCCCchhhhhhhhhhhccChHHHHHHHHHHHHHHhcCCCCCccchhccCCCCCCCCCCCCcccccCCccc
Q psy10829        231 NLCQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLTNLKARSIVP  310 (545)
Q Consensus       231 ~L~~Y~~~~~~PrpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~g~~~~~~~~~~l~~i~t~~i~p  310 (545)
                      +|++|++..+.|||||||+|++++..+. +++++.+|+++++++|||||||+||+. ++        +.|.++++++|+|
T Consensus       235 ~l~~y~~~~~~prpesyr~d~~~~~~~~-~~~~~~~y~~~~~~~eSGwD~s~R~~~-~~--------~~l~~~~t~~i~~  304 (535)
T 2jg0_A          235 LLNRYWDDRDTPRPESWVEDIATAKSNP-NRPATEIYRDLRSAAASGWDFSSRWMD-NP--------QQLNTLRTTSIVP  304 (535)
T ss_dssp             EEECCCCSCCSCCGGGHHHHHHHHHTCT-TSCHHHHHHHHHHHHHTTCCSCGGGBS-ST--------TCGGGBCGGGEEC
T ss_pred             cceeeccCCCCCCCcceeehhhhhhccc-cchhHHHHHHHHHHHhCCCCCccccCC-CC--------CcccccCCccchh
Confidence            7999999999999999999999987663 456889999999999999999999993 33        7899999999999


Q ss_pred             HhHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccccCcceEEEEEcCCCceeecccccchHHHhcCCC
Q psy10829        311 VDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCY  390 (545)
Q Consensus       311 VDLNa~ly~~~~~LA~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~Dyd~~~~~~~~~~~~s~~~PL~~g~~  390 (545)
                      |||||+||.+++.||+||+++|+.+++++|+++|++++++|+++|||++.|+|+||++.+++++++++.++++|||+|++
T Consensus       305 VDlnA~ly~a~~~la~lA~~lG~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~~~~~~~~~~~~s~~~PL~~gi~  384 (535)
T 2jg0_A          305 VDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAA  384 (535)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTTTEECCCCBGGGGHHHHTTCS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeCCCCCEeeeehhhhHHHHhcCCC
Confidence            99999999999999999999999888999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcchHHHHHHHHHHHHhcCccccCCCccccccCCCCcCcCCCCCchhHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH
Q psy10829        391 NQSDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANF  470 (545)
Q Consensus       391 ~~~~a~~~~~~v~~~l~~~~~l~~~gGlptsl~~sg~qWd~PnvWppl~~~~i~gL~~yG~~~~~~lA~~la~r~l~~~~  470 (545)
                      +++++    ++|++.|.+.  |.+++||+|+..++++||||||||||+|+++++||++||+   .++|.+|+++|+.++.
T Consensus       385 ~~e~a----~~v~~~l~~~--l~t~~GlrT~s~~s~~yW~GpNvW~~~~~l~i~gL~~yG~---~~~A~~la~~~l~~~~  455 (535)
T 2jg0_A          385 AKDRA----NKMATATKTH--LLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQ  455 (535)
T ss_dssp             CHHHH----HHHHHHHHHH--TEETTEECSBSCCCSSSSSTTEECHHHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHH
T ss_pred             CHHHH----HHHHHHHHHH--hccCCCCCCCcCCCccccCCCCcchhHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHH
Confidence            98764    4555555532  6689999998889999999999999999999999999999   9999999999999999


Q ss_pred             HHHHhcCcceeecccCCCCCCCCCcccccCCCccchHHHHHHHHHHhhchhcC
Q psy10829        471 KAFNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSL  523 (545)
Q Consensus       471 ~~~~~~g~m~EkYd~~~~~~~gggGey~~q~gFGWTngv~L~ll~~~~~~~~~  523 (545)
                      ++|.++|.|+|+||+.++++.|+||||++|.+|||||||+|.|+.+|++.+++
T Consensus       456 ~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~~y~~~~~~  508 (535)
T 2jg0_A          456 HTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQP  508 (535)
T ss_dssp             HHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSCSSSC
T ss_pred             HHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhccC
Confidence            99999999999999998887788899999999999999999999999998754

PyMOL of 2jg0

>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}	Back alignment and structure

>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}	Back alignment and structure

>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}	Back alignment and structure

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*	Back alignment and structure

>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}	Back alignment and structure

>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*	Back alignment and structure

>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*	Back alignment and structure

>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*	Back alignment and structure

>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*	Back alignment and structure

>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8	Back alignment and structure

>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*	Back alignment and structure

>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A	Back alignment and structure

>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A	Back alignment and structure

>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*	Back alignment and structure

>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*	Back alignment and structure

>2ww2_A Mannosidase, alpha-1,2-mannosidase; hydrolase, glycoside hydrolase family 92, BT2199; HET: SWA; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvy_A*	Back alignment and structure

>2wvx_A Mannosidase, putative alpha-1,2-mannosidase; glycoside hydrolase family 92, GH92, hydrolase, BT3990; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvz_A* 2ww0_A* 2ww1_A* 2ww3_A* 2wvx_B* 2wzs_A*	Back alignment and structure

>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}	Back alignment and structure

>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3	Back alignment and structure

>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}	Back alignment and structure

>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*	Back alignment and structure

>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}	Back alignment and structure

>2xsg_A Ccman5; hydrolase, mannosidase; HET: B3P; 2.00A {Cellulosimicrobium cellulans}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		545
d2jg0a1		511	a.102.1.9 (A:37-547) Periplasmic trehalase TreA {E	1e-160

>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]} Length = 511	Back information, alignment and structure


class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Trehalase-like
domain: Periplasmic trehalase TreA
species: Escherichia coli [TaxId: 562]

 Score =  464 bits (1194), Expect = e-160
 Identities = 166/542 (30%), Positives = 252/542 (46%), Gaps = 56/542 (10%)

Query: 1   MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFED 60
            A LFPD KTF D      P      +    N      S  +L  FVN  F     E E 
Sbjct: 17  NAKLFPDQKTFADAVPNSDPLMILADYRMQQN-----QSGFDLRHFVNVNFTL-PKEGEK 70

Query: 61  WSPSDWVESPRFLSKIKDKNFQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVI 120
           + P +                Q     ++ LW  L R  ++     +   S++ +P P +
Sbjct: 71  YVPPEG---------------QSLREHIDGLWPVLTRSTEN----TEKWDSLLPLPEPYV 111

Query: 121 VPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSIVEEYGFIPNGGRVYYAMRSQ 180
           VPGGRFRE YYWDSY+ + GL  S  +  V  M+ NF   ++ YG IPNG R YY  RSQ
Sbjct: 112 VPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQ 171

Query: 181 PPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTT--------KVEKDGQFYNL 232
           PP    MV+       D   L + +  ++KE+ +WM+            +V K      L
Sbjct: 172 PPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLL 230

Query: 233 CQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNK 292
            ++ +    PRPES+ ED+ +A+           Y +L+SAA SGWDFSSRW        
Sbjct: 231 NRYWDDRDTPRPESWVEDIATAKSN-PNRPATEIYRDLRSAAASGWDFSSRWM------- 282

Query: 293 GKSGEGNLTNLKARSIVPVDLNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVT 352
                  L  L+  SIVPVDLN++++    +L++     G    +  Y  +A    + + 
Sbjct: 283 --DNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIE 340

Query: 353 KVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQSDTEHYISKVMKYLEKTQIM 412
           K LW+D+ G + DYD+ +   R+    + L PL+     +       +    +L +    
Sbjct: 341 KYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQP--- 397

Query: 413 VNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKA 472
              GG+ TT   SG+QWD PN W PLQ++   GL +      +++A +++  ++      
Sbjct: 398 ---GGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHT 451

Query: 473 FNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEDKFVDLPA 532
           ++    + EKYD +  G  GGGGEY +Q GFGWTNGV +++LD    +    D   ++PA
Sbjct: 452 YDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCD---NVPA 508

Query: 533 PQ 534
            +
Sbjct: 509 TR 510

PyMOL of d2jg0a1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		545
d2jg0a1		511	Periplasmic trehalase TreA {Escherichia coli [TaxI	100.0
d1v7wa1		531	Chitobiose phosphorylase ChbP {Vibrio proteolyticu	99.68
d1lf6a1		397	Bacterial glucoamylase, C-terminal domain {Thermoa	99.33
d1ulva1		413	Glucodextranase, domain A {Arthrobacter globiformi	98.98
d1gaia_		472	Glucoamylase {Aspergillus awamori, variant x100 [T	98.17
d2nvpa1		426	Hypothetical protein CPF0428 {Clostridium perfring	97.76
d2p0va1		443	Hypothetical protein BT3781 {Bacteroides thetaiota	97.63
d2fbaa1		492	Glucoamylase {Yeast (Saccharomycopsis fibuligera)	97.55
d1h54a1		485	Lactobacillus maltose phosphorylase, central domai	92.13
d2afaa1		411	Putative NAG isomerase YihS {Salmonella typhimuriu	84.47

>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Trehalase-like
domain: Periplasmic trehalase TreA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-127  Score=1049.56  Aligned_cols=481  Identities=34%  Similarity=0.630  Sum_probs=439.3

Q ss_pred             CCCCCCCCCcccCCCCCCCHHHHHHHHHHhhhhcCCCCCHHHHHHHHHhhcCCCCCCcccCCCCCCCCCcccccccCChh
Q psy10829          1 MASLFPDSKTFVDMKLKHTPDTTWRMFNELMNQTENRPSRSELEQFVNETFDEAGSEFEDWSPSDWVESPRFLSKIKDKN   80 (545)
Q Consensus         1 ~~~~f~DsKtfvD~~~~~~~~~il~~~~~~~~~~~~~~~~~~l~~Fv~~~F~~~~~e~~~~~~~d~~~~p~~~~~i~d~~   80 (545)
                      +++||+||||||||+||.+|++||++|++++.     .++++|++||.+||+.| .|++.|+|+||              
T Consensus        17 ~~~~~~dsk~fvd~~~~~~~~~~~~~~~~~~~-----~~~~~l~~f~~~~f~~~-~~~~~~~~~~~--------------   76 (511)
T d2jg0a1          17 NAKLFPDQKTFADAVPNSDPLMILADYRMQQN-----QSGFDLRHFVNVNFTLP-KEGEKYVPPEG--------------   76 (511)
T ss_dssp             HTTCSSSHHHHHTCEESSCHHHHHHHHHHHTT-----STTCCHHHHHHHHEECC-C----CCCCTT--------------
T ss_pred             HhCCCCCCCcccCCCCCCCHHHHHHHHHhhcC-----CCHHHHHHHHHHhCCCC-cccccCCCchH--------------
Confidence            58999999999999999999999999998864     35588999999999988 59999988877              


Q ss_pred             HHHHHHHHhHHHHHhhhccccccccCCCCcccccccCCccccCCCCCccccchHHHHHHHHHhhcchhhHHHHHHHHHHh
Q psy10829         81 FQEWASQLNALWKFLGRKMKDDVRLHQDQYSIIYVPHPVIVPGGRFREFYYWDSYWIIRGLILSEMFHTVKGMLGNFLSI  160 (545)
Q Consensus        81 ~~~~~~~i~~~W~~l~r~~~~~v~~~~~~~sli~lp~pfivPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~ml~nf~~~  160 (545)
                       |+|+++||++|+.|+|++++    +++++||||||||||||||||||+||||||||++||+.+||+++|++||+||+++
T Consensus        77 -~~~~~~~~~~w~~l~r~~~~----~~~~~sli~~p~p~iVPGgrF~e~yyWDSyfi~lGLl~~~~~~~a~~ml~nf~~~  151 (511)
T d2jg0a1          77 -QSLREHIDGLWPVLTRSTEN----TEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHE  151 (511)
T ss_dssp             -CCHHHHHHHHTTTTEECCSS----CCTTCSBCCCSSCEECCBTTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHhccCCCC----CCCCCceeeCCCCeeCCCCCcCcccchHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence             45899999999999999874    4678999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCccccccCCCCCCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhCCCcccc--------cCCceeee
Q psy10829        161 VEEYGFIPNGGRVYYAMRSQPPLLIPMVKSYIDATNDLQFLNESIDTLEKEFLFWMNNRTTKVE--------KDGQFYNL  232 (545)
Q Consensus       161 i~~~G~IPng~r~yy~~rSQPPll~~mv~~~~~~t~D~~fl~~~~p~L~ke~~~W~~~R~v~~~--------~~G~~~~L  232 (545)
                      |+++||||||+|+||++|||||+|++||.+|+++|+| +||++++|.|++||.||+++++....        ..+..+.+
T Consensus       152 i~~~G~IPng~r~yy~~rSQPPlla~mv~~~~~~t~D-~~L~~~lp~L~~e~~~W~~~~~~~~~~~~~~~~~~~~~g~~l  230 (511)
T d2jg0a1         152 IDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLL  230 (511)
T ss_dssp             HHHHSSCCSBSBGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCEE
T ss_pred             HHhCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHhcCCcccCCCceeeeecCCCCccc
Confidence            9999999999999999999999999999999999998 68999999999999999998763211        11223589


Q ss_pred             eeeecCCCCCCCchhhhhhhhhhhccChHHHHHHHHHHHHHHhcCCCCCccchhccCCCCCCCCCCCCcccccCCcccHh
Q psy10829        233 CQFKEFSSGPRPESYREDVTSAQIFRSEVEKEAHYSELKSAAESGWDFSSRWFVLNGTNKGKSGEGNLTNLKARSIVPVD  312 (545)
Q Consensus       233 ~~Y~~~~~~PrpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~g~~~~~~~~~~l~~i~t~~i~pVD  312 (545)
                      +||++...+||||||++|++++.... ...+.++|+++++++|||||||+||+. ++        ..|.+++|+.|+|||
T Consensus       231 ~ry~~~~~~prpEsyr~D~~~a~~~~-~~~~~~~y~~l~s~~ESGwD~S~Rw~~-~~--------~~l~~~~t~~i~pVD  300 (511)
T d2jg0a1         231 NRYWDDRDTPRPESWVEDIATAKSNP-NRPATEIYRDLRSAAASGWDFSSRWMD-NP--------QQLNTLRTTSIVPVD  300 (511)
T ss_dssp             ECCCCSCCSCCGGGHHHHHHHHHTCT-TSCHHHHHHHHHHHHHTTCCSCGGGBS-ST--------TCGGGBCGGGEECHH
T ss_pred             cccccccCCCCchhhhhhhhhhhccc-chhHHHHHHHHHHHHhccCCccccccC-Ch--------hhhcccccccccccc
Confidence            99999999999999999999998763 456778999999999999999999993 43        788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhhccccCcceEEEEEcCCCceeecccccchHHHhcCCCCC
Q psy10829        313 LNAIIYWNADLLSQFYNTLGQGNKSLHYSNVAKEWLEAVTKVLWHDEVGVWLDYDISNEIKRDYFYPSNLSPLWTGCYNQ  392 (545)
Q Consensus       313 LNa~ly~~~~~LA~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~Dyd~~~~~~~~~~~~s~~~PL~~g~~~~  392 (545)
                      |||+||.++++|+.+|+++|+.+++.+|+++|++++++|+++|||+++|+|+|||+.+++++.++++++++|||+|++++
T Consensus       301 LNsll~~~~~~La~la~~lg~~~~a~~~~~~a~~~~~ai~~~lWd~e~g~~~Dyd~~~~~~~~~~~~~~~~PL~~g~~~~  380 (511)
T d2jg0a1         301 LNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAK  380 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTTTEECCCCBGGGGHHHHTTCSCH
T ss_pred             HHHHHHHHHHHHHHHHHHhcchHhHHHHHHHHHHHHHHHHHHhccCccCeeEEEecCCCCEEeeeccchhhHhhccCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cchHHHHHHHHHHHHhcCccccCCCccccccCCCCcCcCCCCCchhHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH
Q psy10829        393 SDTEHYISKVMKYLEKTQIMVNLGGIPTTLEHSGEQWDYPNAWPPLQYIMIMGLHSTNDKWAQDLAYEMTERWVRANFKA  472 (545)
Q Consensus       393 ~~a~~~~~~v~~~l~~~~~l~~~gGlptsl~~sg~qWd~PnvWppl~~~~i~gL~~yG~~~~~~lA~~la~r~l~~~~~~  472 (545)
                      ++++++++.    +...  |.++|||||++.++++||||||||||+|||+++||++||+   .++|.+||++|+++++++
T Consensus       381 ~~~~~~~~~----l~~~--~~~~gGipt~~~~~~~yWrgPnvW~p~n~lii~gL~~yG~---~e~A~~la~~~l~~~~~~  451 (511)
T d2jg0a1         381 DRANKMATA----TKTH--LLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHT  451 (511)
T ss_dssp             HHHHHHHHH----HHHH--TEETTEECSBSCCCSSSSSTTEECHHHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH----HHHh--hccCCCcCCCCCCCCCCCCCCCcCHhHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHH
Confidence            775554444    4433  6689999999999999999999999999999999999999   999999999999999999


Q ss_pred             HHhcCcceeecccCCCCCCCCCcccccCCCccchHHHHHHHHHHhhchhcCCCC
Q psy10829        473 FNETHAMYEKYDATVPGGHGGGGEYEIQLGFGWTNGVIMELLDKFSDRLSLEDK  526 (545)
Q Consensus       473 ~~~~g~m~EkYd~~~~~~~gggGey~~q~gFGWTngv~L~ll~~~~~~~~~~~~  526 (545)
                      |.++|.|+||||+.+++..||||||++|+||||||||+|+||+.||.++++.++
T Consensus       452 ~~~tg~~~EkYd~~~~g~~G~ggey~~q~gFGWTngv~L~ll~~~~~~~~~~~~  505 (511)
T d2jg0a1         452 YDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDN  505 (511)
T ss_dssp             HHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSCSSSCCSS
T ss_pred             hhhCCceEEeeCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHhhCccccCCCC
Confidence            999999999999999999999999999999999999999999999988776543

PyMOL of d2jg0a1

>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]}	Back information, alignment and structure

>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]}	Back information, alignment and structure

>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]}	Back information, alignment and structure

>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]}	Back information, alignment and structure

>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]}	Back information, alignment and structure

>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]}	Back information, alignment and structure

>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]}	Back information, alignment and structure

>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure