Psyllid ID: psy10886

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
MGAKVSRTDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGYETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPYARMKRKHRGLD
ccccccccccEEcccccccHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccccccccccc
cccccccccEEEEccccccHHHHHHHHHHcHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccEHcccHHHHHHHHHccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHccHEcccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccHHHHHHHHEEcccccEEEEccccEEEEEEcccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccccccHHEEccccccc
mgakvsrtdfewtyteephasRRKEILKKYPEIkklfgsdpkfKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHnlafghsrpTANRILSLIanlpigipfaITFKYYHlehhryqgdekldtdiptYMEARLFCTTFGKFIWVClqpffyafrpiftypkaptalELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMamglhpvaghfvsehymfkkgyetysyygplnwitfnvgyhnehhdfpavpgsrlpMVKKIASEyydnlpqhhswsavlydfvmdpdigpyarmkrkhrgld
mgakvsrtdfewtyteephasrrkeILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGYETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPYARMKRKHRGLD
MGAKVSRTDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGYETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPYARMKRKHRGLD
***********WT************ILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGYETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPY***********
******R***EWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGYETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPYAR*********
MGAKVSRTDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGYETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPYARM********
*******TDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGYETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPYARMKRKH****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGAKVSRTDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGYETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPYARMKRKHRGLD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query320 2.2.26 [Sep-21-2011]
Q3ZBY7323 Sphingolipid delta(4)-des yes N/A 0.993 0.984 0.594 1e-116
O15121323 Sphingolipid delta(4)-des yes N/A 0.993 0.984 0.600 1e-113
Q5RE51323 Sphingolipid delta(4)-des yes N/A 0.993 0.984 0.597 1e-113
Q5F3C1323 Sphingolipid delta(4)-des no N/A 0.993 0.984 0.569 1e-111
Q68FB8323 Sphingolipid delta(4)-des yes N/A 0.993 0.984 0.569 1e-110
Q5XIF5323 Sphingolipid delta(4)-des yes N/A 0.993 0.984 0.584 1e-110
O09005323 Sphingolipid delta(4)-des yes N/A 0.993 0.984 0.584 1e-110
Q6UQ04323 Sphingolipid delta(4)-des N/A N/A 0.993 0.984 0.569 1e-109
Q6QHC5323 Sphingolipid delta(4)-des no N/A 0.990 0.981 0.567 1e-108
Q0II71323 Sphingolipid delta(4)-des no N/A 0.981 0.972 0.566 1e-107
>sp|Q3ZBY7|DEGS1_BOVIN Sphingolipid delta(4)-desaturase DES1 OS=Bos taurus GN=DEGS1 PE=2 SV=1 Back     alignment and function desciption
 Score =  419 bits (1077), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 189/318 (59%), Positives = 241/318 (75%)

Query: 1   MGAKVSRTDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYF 60
           MG +VSR DFEW YT++PHA+RR+EIL KYPEIK L   D    +IV+ MVL QFV+ Y 
Sbjct: 1   MGNRVSREDFEWVYTDQPHATRRQEILAKYPEIKSLMKPDSNLIWIVIMMVLTQFVAFYL 60

Query: 61  LRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPF 120
           ++++ W  +L  AY FG  +NHS+ L+IHE++HN AFGH +   NR   + ANLPIG+P+
Sbjct: 61  VKDLDWKWVLFWAYAFGSCVNHSMTLAIHEVSHNSAFGHYKAMWNRWFGIFANLPIGVPY 120

Query: 121 AITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPK 180
           +++FK YH++HHRY G + +D DIPT  E   FCTTF KFIWV LQP FYAFRP+F  PK
Sbjct: 121 SVSFKRYHMDHHRYLGADGIDVDIPTDFEGWFFCTTFRKFIWVILQPLFYAFRPLFINPK 180

Query: 181 APTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGY 240
             + LE+ NTV+QI+FD+ + Y LG + L YML  SL  +GLHP++GHF++EHYMF KG+
Sbjct: 181 PISYLEIINTVIQITFDIVVYYVLGVKSLVYMLAASLFGLGLHPISGHFIAEHYMFLKGH 240

Query: 241 ETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDF 300
           ETYSYYGPLN +TFNVGYHNEHHDFP +PG  LP+V+KIA+EYYDNLP ++SW  VLYDF
Sbjct: 241 ETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDF 300

Query: 301 VMDPDIGPYARMKRKHRG 318
           V D  I PY+RMKR  +G
Sbjct: 301 VTDDTISPYSRMKRHLKG 318
Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).
Bos taurus (taxid: 9913)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|O15121|DEGS1_HUMAN Sphingolipid delta(4)-desaturase DES1 OS=Homo sapiens GN=DEGS1 PE=1 SV=1 Back     alignment and function description
>sp|Q5RE51|DEGS1_PONAB Sphingolipid delta(4)-desaturase DES1 OS=Pongo abelii GN=DEGS1 PE=2 SV=1 Back     alignment and function description
>sp|Q5F3C1|DEGS1_CHICK Sphingolipid delta(4)-desaturase DES1 OS=Gallus gallus GN=DEGS1 PE=2 SV=1 Back     alignment and function description
>sp|Q68FB8|DEGS1_XENTR Sphingolipid delta(4)-desaturase DES1 OS=Xenopus tropicalis GN=degs1 PE=2 SV=1 Back     alignment and function description
>sp|Q5XIF5|DEGS1_RAT Sphingolipid delta(4)-desaturase DES1 OS=Rattus norvegicus GN=Degs1 PE=2 SV=1 Back     alignment and function description
>sp|O09005|DEGS1_MOUSE Sphingolipid delta(4)-desaturase DES1 OS=Mus musculus GN=Degs1 PE=2 SV=1 Back     alignment and function description
>sp|Q6UQ04|DEGS1_MICFO Sphingolipid delta(4)-desaturase DES1 OS=Microtus fortis GN=DEGS1 PE=2 SV=1 Back     alignment and function description
>sp|Q6QHC5|DEGS2_HUMAN Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2 OS=Homo sapiens GN=DEGS2 PE=2 SV=2 Back     alignment and function description
>sp|Q0II71|DEGS2_BOVIN Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2 OS=Bos taurus GN=DEGS2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
242017438321 dihydroceramide desaturase, putative [Pe 1.0 0.996 0.759 1e-150
91085523321 PREDICTED: similar to sphingolipid delta 1.0 0.996 0.756 1e-149
340727606321 PREDICTED: sphingolipid delta(4)-desatur 0.996 0.993 0.755 1e-149
350412072321 PREDICTED: sphingolipid delta(4)-desatur 0.996 0.993 0.755 1e-148
383859836321 PREDICTED: sphingolipid delta(4)-desatur 1.0 0.996 0.756 1e-147
332025242320 Sphingolipid delta(4)-desaturase DES1 [A 1.0 1.0 0.743 1e-147
380028421321 PREDICTED: LOW QUALITY PROTEIN: sphingol 0.996 0.993 0.746 1e-146
307198147321 Sphingolipid delta(4)-desaturase DES1 [H 1.0 0.996 0.737 1e-146
332376995321 unknown [Dendroctonus ponderosae] 1.0 0.996 0.746 1e-145
195434727321 GK14712 [Drosophila willistoni] gi|19416 1.0 0.996 0.718 1e-145
>gi|242017438|ref|XP_002429195.1| dihydroceramide desaturase, putative [Pediculus humanus corporis] gi|212514084|gb|EEB16457.1| dihydroceramide desaturase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 243/320 (75%), Positives = 280/320 (87%)

Query: 1   MGAKVSRTDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYF 60
           MGA V+RTDFEW YTEEPHASRRKEIL KYP+IKKLFG DPKFK+IVL M+ +Q V M+ 
Sbjct: 1   MGAAVTRTDFEWVYTEEPHASRRKEILAKYPQIKKLFGYDPKFKWIVLLMISIQVVLMHL 60

Query: 61  LRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPF 120
           + N SW ++L  AYC GGVINHSLML+IHE++HNLAFGH+RP ANRI  +  NL IG PF
Sbjct: 61  MVNQSWTIILLTAYCIGGVINHSLMLAIHEISHNLAFGHARPLANRIFGMFTNLVIGFPF 120

Query: 121 AITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPK 180
           ++TFK YHLEHHRYQGDEKLDTDIPTY+EA+LFCTTFGKF+W+  QP FYA RPIFTYPK
Sbjct: 121 SVTFKIYHLEHHRYQGDEKLDTDIPTYLEAKLFCTTFGKFVWLFFQPLFYALRPIFTYPK 180

Query: 181 APTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGY 240
           +PT LEL N V+Q+ FDVF+ Y+ GG++L+Y+ +GSL+AMGLHPVAGHF+SEHYMFKKG+
Sbjct: 181 SPTTLELINVVIQLIFDVFVYYYFGGKVLAYLTIGSLLAMGLHPVAGHFISEHYMFKKGF 240

Query: 241 ETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDF 300
           ETYSYYGPLNWITFNVGYHNEHHDFPAVPGS LP VKKIA EYYDNLPQH+SW+ VLYDF
Sbjct: 241 ETYSYYGPLNWITFNVGYHNEHHDFPAVPGSLLPEVKKIAPEYYDNLPQHNSWTGVLYDF 300

Query: 301 VMDPDIGPYARMKRKHRGLD 320
           VMDPDIGPYAR+KRKH+G  
Sbjct: 301 VMDPDIGPYARIKRKHKGFS 320

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91085523|ref|XP_972076.1| PREDICTED: similar to sphingolipid delta 4 desaturase/c-4 hydroxylase protein des2 [Tribolium castaneum] gi|270009198|gb|EFA05646.1| hypothetical protein TcasGA2_TC015856 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|340727606|ref|XP_003402131.1| PREDICTED: sphingolipid delta(4)-desaturase DES1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350412072|ref|XP_003489536.1| PREDICTED: sphingolipid delta(4)-desaturase DES1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|383859836|ref|XP_003705398.1| PREDICTED: sphingolipid delta(4)-desaturase DES1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332025242|gb|EGI65416.1| Sphingolipid delta(4)-desaturase DES1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|380028421|ref|XP_003697901.1| PREDICTED: LOW QUALITY PROTEIN: sphingolipid delta(4)-desaturase DES1-like [Apis florea] Back     alignment and taxonomy information
>gi|307198147|gb|EFN79175.1| Sphingolipid delta(4)-desaturase DES1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332376995|gb|AEE63637.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|195434727|ref|XP_002065354.1| GK14712 [Drosophila willistoni] gi|194161439|gb|EDW76340.1| GK14712 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
FB|FBgn0001941321 ifc "infertile crescent" [Dros 0.996 0.993 0.717 5.2e-136
UNIPROTKB|O15121323 DEGS1 "Sphingolipid delta(4)-d 0.993 0.984 0.600 6.8e-111
UNIPROTKB|I3LKA2323 DEGS1 "Uncharacterized protein 0.993 0.984 0.591 2.9e-110
UNIPROTKB|Q3ZBY7323 DEGS1 "Sphingolipid delta(4)-d 0.993 0.984 0.594 4.8e-110
UNIPROTKB|E1C3J9322 DEGS2 "Uncharacterized protein 0.984 0.978 0.580 2.6e-109
RGD|70917323 Degs1 "delta(4)-desaturase, sp 0.993 0.984 0.584 1.1e-108
MGI|MGI:1097711323 Degs1 "degenerative spermatocy 0.993 0.984 0.584 1.5e-108
UNIPROTKB|Q6QHC5323 DEGS2 "Sphingolipid delta(4)-d 0.990 0.981 0.567 1.1e-105
UNIPROTKB|Q0II71323 DEGS2 "Sphingolipid delta(4)-d 0.981 0.972 0.566 1.7e-105
ZFIN|ZDB-GENE-030131-5283350 degs1 "degenerative spermatocy 0.984 0.9 0.565 1.7e-105
FB|FBgn0001941 ifc "infertile crescent" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
 Identities = 229/319 (71%), Positives = 275/319 (86%)

Query:     1 MGAKVSRTDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYF 60
             MG KVSRTDFEW YTEEPHASRRK IL+KYP+IKKLFG DP FK++  +MVL Q ++++ 
Sbjct:     1 MGQKVSRTDFEWVYTEEPHASRRKIILEKYPQIKKLFGHDPNFKWVAGAMVLTQILALFV 60

Query:    61 LRNVSWPVLLTVAYCFGGVINHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPF 120
             ++++SW  L+  AYCFGG+INHSLML++HE++HNLAFGHSRP  NRIL  I NLPIG+P 
Sbjct:    61 VKDLSWSWLIVAAYCFGGIINHSLMLAVHEISHNLAFGHSRPMHNRILGFICNLPIGLPM 120

Query:   121 AITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPK 180
             +I+FK YHLEHHRYQGDE +DTDIPT +EARLF TTFGKF+WVCLQPFFY FRP+   PK
Sbjct:   121 SISFKKYHLEHHRYQGDEAIDTDIPTLLEARLFDTTFGKFLWVCLQPFFYIFRPLIINPK 180

Query:   181 APTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGY 240
              PT LE+ NTVVQ++F+  I YFLG + L+Y+L+GS++AMGLHPVAGHF+SEHYMF KG+
Sbjct:   181 PPTRLEIINTVVQLTFNALIVYFLGWKPLAYLLIGSILAMGLHPVAGHFISEHYMFAKGF 240

Query:   241 ETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDF 300
             ETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLP VK+IA E+YD +PQH SW+ VLYDF
Sbjct:   241 ETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPEVKRIAKEFYDTMPQHTSWTRVLYDF 300

Query:   301 VMDPDIGPYARMKRKHRGL 319
             +MDP +GPYAR+KR+ RGL
Sbjct:   301 IMDPAVGPYARVKRRQRGL 319
GO:0007283 "spermatogenesis" evidence=IMP;TAS
GO:0005886 "plasma membrane" evidence=ISS;NAS
GO:0007053 "spindle assembly involved in male meiosis" evidence=IMP
GO:0005739 "mitochondrion" evidence=IDA;TAS
GO:0016006 "Nebenkern" evidence=IDA
GO:0070938 "contractile ring" evidence=IDA
GO:0004768 "stearoyl-CoA 9-desaturase activity" evidence=ISS
GO:0042284 "sphingolipid delta-4 desaturase activity" evidence=IDA
GO:0006633 "fatty acid biosynthetic process" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
UNIPROTKB|O15121 DEGS1 "Sphingolipid delta(4)-desaturase DES1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|I3LKA2 DEGS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q3ZBY7 DEGS1 "Sphingolipid delta(4)-desaturase DES1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1C3J9 DEGS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|70917 Degs1 "delta(4)-desaturase, sphingolipid 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1097711 Degs1 "degenerative spermatocyte homolog 1 (Drosophila)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q6QHC5 DEGS2 "Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q0II71 DEGS2 "Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5283 degs1 "degenerative spermatocyte homolog 1, lipid desaturase (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8R2F2DEGS2_MOUSE1, ., 1, 4, ., -, ., -0.57140.98430.9752noN/A
G5EC63DEGS2_CAEEL1, ., 1, 4, ., -, ., -0.54250.99060.8756yesN/A
O44186DEGS1_CAEEL1, ., 1, 4, ., -, ., -0.53770.99370.8833noN/A
O59715DEGS_SCHPO1, ., 1, 4, ., -, ., -0.44950.96560.8535yesN/A
Q3ZBY7DEGS1_BOVIN1, ., 1, 4, ., -, ., -0.59430.99370.9845yesN/A
O09005DEGS1_MOUSE1, ., 1, 4, ., -, ., -0.58490.99370.9845yesN/A
Q6QHC5DEGS2_HUMAN1, ., 1, 4, ., -, ., -0.56780.99060.9814noN/A
Q0II71DEGS2_BOVIN1, ., 1, 4, ., -, ., -0.56680.98120.9721noN/A
Q6UQ04DEGS1_MICFO1, ., 1, 4, ., -, ., -0.56910.99370.9845N/AN/A
Q564G3DEGS2_RAT1, ., 1, 4, ., -, ., -0.56820.98430.9752noN/A
Q5RE51DEGS1_PONAB1, ., 1, 4, ., -, ., -0.59740.99370.9845yesN/A
Q5XIF5DEGS1_RAT1, ., 1, 4, ., -, ., -0.58490.99370.9845yesN/A
O15121DEGS1_HUMAN1, ., 1, 4, ., -, ., -0.60060.99370.9845yesN/A
Q5F3C1DEGS1_CHICK1, ., 1, 4, ., -, ., -0.56910.99370.9845noN/A
Q68FB8DEGS1_XENTR1, ., 1, 4, ., -, ., -0.56910.99370.9845yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.15LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
cd03508289 cd03508, Delta4-sphingolipid-FADS-like, The Delta4 1e-166
PLN02579323 PLN02579, PLN02579, sphingolipid delta-4 desaturas 1e-164
pfam0855739 pfam08557, Lipid_DES, Sphingolipid Delta4-desatura 1e-20
pfam00487251 pfam00487, FA_desaturase, Fatty acid desaturase 1e-18
COG3239343 COG3239, DesA, Fatty acid desaturase [Lipid metabo 1e-12
cd01060122 cd01060, Membrane-FADS-like, The membrane fatty ac 4e-08
cd03506204 cd03506, Delta6-FADS-like, The Delta6 Fatty Acid D 3e-07
cd03514207 cd03514, CrtR_beta-carotene-hydroxylase, Beta-caro 1e-04
cd03510175 cd03510, Rhizobitoxine-FADS-like, This CD includes 0.001
cd01060122 cd01060, Membrane-FADS-like, The membrane fatty ac 0.004
>gnl|CDD|239585 cd03508, Delta4-sphingolipid-FADS-like, The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase (MLD), reported to modulate biosynthesis of the epidermal growth factor receptor; and other related proteins Back     alignment and domain information 
 Score =  463 bits (1194), Expect = e-166
 Identities = 189/291 (64%), Positives = 231/291 (79%), Gaps = 3/291 (1%)

Query: 26  ILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVINHSLM 85
           IL KYPEIKKLFG DP  K++VL +VL+Q ++ Y LR+ SW  +L VAY FGG INHSL 
Sbjct: 1   ILAKYPEIKKLFGPDPLTKWVVLGVVLLQIITAYLLRDSSWWKILLVAYFFGGTINHSLF 60

Query: 86  LSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIP 145
           L+IHE++HNLAFG  +P  NR+  + ANLPIG+P++I+FK YHLEHHRY G++ LDTDIP
Sbjct: 61  LAIHEISHNLAFG--KPLWNRLFGIFANLPIGVPYSISFKKYHLEHHRYLGEDGLDTDIP 118

Query: 146 TYMEARLFCTTFGKFIWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLG 205
           T  E +LF T  GK IWV LQPFFYA RP+F  PK PT LE+ N VVQI+FD  I YF G
Sbjct: 119 TEFEGKLFSTVLGKAIWVTLQPFFYALRPLFVRPKPPTRLEVINIVVQITFDYLIYYFFG 178

Query: 206 GRMLSYMLLGSLMAMGLHPVAGHFVSEHYMF-KKGYETYSYYGPLNWITFNVGYHNEHHD 264
            + L+Y+LLGS +  GLHP+AGHF+SEHY+F  KG ETYSYYGPLN +TFNVGYHNEHHD
Sbjct: 179 WKSLAYLLLGSFLGGGLHPLAGHFISEHYVFTGKGQETYSYYGPLNLLTFNVGYHNEHHD 238

Query: 265 FPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPYARMKRK 315
           FP +PG+RLP ++KIA E+YDNLPQH SW  VLYDF+MD ++GPY+R+KRK
Sbjct: 239 FPYIPGTRLPKLRKIAPEFYDNLPQHTSWPRVLYDFIMDDNVGPYSRVKRK 289

These proteins are found in various eukaryotes including vertebrates, higher plants, and fungi. Studies show that MLD is localized to the endoplasmic reticulum. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase. Length = 289
>gnl|CDD|215316 PLN02579, PLN02579, sphingolipid delta-4 desaturase Back     alignment and domain information
>gnl|CDD|117132 pfam08557, Lipid_DES, Sphingolipid Delta4-desaturase (DES) Back     alignment and domain information
>gnl|CDD|215943 pfam00487, FA_desaturase, Fatty acid desaturase Back     alignment and domain information
>gnl|CDD|225779 COG3239, DesA, Fatty acid desaturase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|238511 cd01060, Membrane-FADS-like, The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins Back     alignment and domain information
>gnl|CDD|239583 cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria Back     alignment and domain information
>gnl|CDD|239591 cd03514, CrtR_beta-carotene-hydroxylase, Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae Back     alignment and domain information
>gnl|CDD|239587 cd03510, Rhizobitoxine-FADS-like, This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins Back     alignment and domain information
>gnl|CDD|238511 cd01060, Membrane-FADS-like, The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 320
KOG2987|consensus324 100.0
PLN02579323 sphingolipid delta-4 desaturase 100.0
cd03508289 Delta4-sphingolipid-FADS-like The Delta4-sphingoli 100.0
cd03511285 Rhizopine-oxygenase-like This CD includes the puta 100.0
PLN02598421 omega-6 fatty acid desaturase 100.0
PLN03198526 delta6-acyl-lipid desaturase; Provisional 100.0
cd03509288 DesA_FADS-like Fatty acid desaturase protein famil 100.0
PLN03199485 delta6-acyl-lipid desaturase-like protein; Provisi 100.0
COG3239343 DesA Fatty acid desaturase [Lipid metabolism] 99.97
cd03514207 CrtR_beta-carotene-hydroxylase Beta-carotene hydro 99.97
PLN02498450 omega-3 fatty acid desaturase 99.97
PLN02505381 omega-6 fatty acid desaturase 99.97
cd03510175 Rhizobitoxine-FADS-like This CD includes the dihyd 99.97
cd03513225 CrtW_beta-carotene-ketolase Beta-carotene ketolase 99.96
cd03506204 Delta6-FADS-like The Delta6 Fatty Acid Desaturase 99.95
PF00487257 FA_desaturase: Fatty acid desaturase This entry is 99.95
cd03507222 Delta12-FADS-like The Delta12 Fatty Acid Desaturas 99.95
KOG4232|consensus430 99.92
cd03512314 Alkane-hydroxylase Alkane hydroxylase is a bacteri 99.86
cd01060122 Membrane-FADS-like The membrane fatty acid desatur 99.71
PF0855739 Lipid_DES: Sphingolipid Delta4-desaturase (DES); I 99.34
PLN02220299 delta-9 acyl-lipid desaturase 99.01
COG1398289 OLE1 Fatty-acid desaturase [Lipid metabolism] 98.98
KOG1600|consensus321 98.2
cd03505178 Delta9-FADS-like The Delta9 Fatty Acid Desaturase 98.1
>KOG2987|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.3e-79  Score=519.05  Aligned_cols=320  Identities=68%  Similarity=1.241  Sum_probs=311.4

Q ss_pred             CCCCCCCCcceecCCCCCChhHhHHHHhhChHHhhhhcCCCchHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q psy10886          1 MGAKVSRTDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFKYIVLSMVLVQFVSMYFLRNVSWPVLLTVAYCFGGVI   80 (320)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~a~~l~~~~   80 (320)
                      ||-.+||+||+|+++||||++||++|++++||+|+||++||...|.+++++.+|+.++++..+.+|.+++..|.++|++.
T Consensus         1 Mg~~~sr~dF~W~yTeePHasRR~eIL~kyPeIk~Lfg~dp~~kwvv~~~Vi~Q~~~~~ll~dl~W~~il~~AYf~gg~i   80 (324)
T KOG2987|consen    1 MGQSVSRTDFEWVYTEEPHASRRKEILAKYPEIKSLFGPDPNLKWVVLGMVILQILAAYLLRDLDWKWILFIAYFFGGFI   80 (324)
T ss_pred             CCCCccccceeEEecCCcchhHHHHHHHhChHHHHHhCCCcchHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHhhhhh
Confidence            89999999999999999999999999999999999999999999999999999999999988889998888899999999


Q ss_pred             HHHHHHHHhhcccccccCCCcchHHHHHHHHhccccccccchhhhHHhHHhhhhcCCCCCCCCcchhhHHHHhhhhhHHH
Q psy10886         81 NHSLMLSIHEMAHNLAFGHSRPTANRILSLIANLPIGIPFAITFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKF  160 (320)
Q Consensus        81 ~~~~~~l~HE~~H~~~f~s~~~~~N~~~G~l~~~~~~~~~~~~~r~~H~~HH~~~n~~~~DpD~~~~~~~~~~~~~~~~~  160 (320)
                      ++.+....||.+|+..|+++|+..|+++|.++++|+|+|+++++|..|+.||++.+.++-|-|+|+..|.+++.+.++++
T Consensus        81 Nhsl~LAIHeiSHN~aFg~~rpl~NR~~g~fANLPigvP~siSFkkYHleHHry~G~DgiDtDvPT~~Ea~~f~t~~~K~  160 (324)
T KOG2987|consen   81 NHSLTLAIHEISHNLAFGTNRPLYNRIFGFFANLPIGVPMSISFKKYHLEHHRYLGVDGIDTDVPTRFEAWLFDTAFGKL  160 (324)
T ss_pred             chhHHHHHHHhhhhhhcccCchHHHHHHHHhhcCcccCceeeeehhhhhHHhHhcCCccccCCCCchhheehhhhhhHHH
Confidence            99999999999999999998899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhccccCCCCccHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcccccceeeeccccccCCCc
Q psy10886        161 IWVCLQPFFYAFRPIFTYPKAPTALELFNTVVQISFDVFICYFLGGRMLSYMLLGSLMAMGLHPVAGHFVSEHYMFKKGY  240 (320)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~~~ll~~~~~~~~~~~~~~~~~eH~~~~~~~  240 (320)
                      +|..+|+++|++||++.+||+...+|.++.++|+.++++++..+||+.+.|++++.++++.+||+.|+|++||+.+.+++
T Consensus       161 iw~~lQpfFY~fRPl~i~pkp~t~me~iN~iiQ~~fd~li~~f~G~ksl~Yll~~s~lg~gLHP~aGHFisEHY~f~k~~  240 (324)
T KOG2987|consen  161 IWVTLQPFFYAFRPLFIYPKPPTDMEFINTIIQLSFDLLIVYFFGWKSLAYLLASSFLGMGLHPIAGHFISEHYMFKKGQ  240 (324)
T ss_pred             HHHHHHHHHHhhhhheecCCCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCCCcccchhhHhhhhhcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccchhhhccccccccccCCCCCCCCChHHHHHHHHHhhcCCCCcccHHHHHHHhhhCCCCCccccccccCCCCC
Q psy10886        241 ETYSYYGPLNWITFNVGYHNEHHDFPAVPGSRLPMVKKIASEYYDNLPQHHSWSAVLYDFVMDPDIGPYARMKRKHRGLD  320 (320)
Q Consensus       241 ~t~s~~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (320)
                      +|+|++|++||+++|.+||+|||.||.||..+||+++++++|||+++|.++||.+++++||+||.+|||+|++|+.+++|
T Consensus       241 ETySYYGplN~~tfNvGYH~EHHDFP~Ipg~~Lp~Vr~iApEyYd~lp~~~Sw~~vlydfi~d~~vgpy~RvKRk~~~~~  320 (324)
T KOG2987|consen  241 ETYSYYGPLNLLTFNVGYHVEHHDFPYIPGSRLPKVREIAPEYYDNLPQHKSWVGVLYDFIMDPTVGPYARVKRKYRKAD  320 (324)
T ss_pred             cceeeecceeeEEEecccccccccCCCCCccccHHHHHhhHHHhcCchhhchHHHHHHHHHcCCCcChHHHHhhhhhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988876

>PLN02579 sphingolipid delta-4 desaturase Back     alignment and domain information
>cd03508 Delta4-sphingolipid-FADS-like The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase (MLD), reported to modulate biosynthesis of the epidermal growth factor receptor; and other related proteins Back     alignment and domain information
>cd03511 Rhizopine-oxygenase-like This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins Back     alignment and domain information
>PLN02598 omega-6 fatty acid desaturase Back     alignment and domain information
>PLN03198 delta6-acyl-lipid desaturase; Provisional Back     alignment and domain information
>cd03509 DesA_FADS-like Fatty acid desaturase protein family subgroup, a delta-12 acyl-lipid desaturase-like, DesA-like, yet uncharacterized subgroup of membrane fatty acid desaturase proteins found in alpha-, beta-, and gamma-proteobacteria Back     alignment and domain information
>PLN03199 delta6-acyl-lipid desaturase-like protein; Provisional Back     alignment and domain information
>COG3239 DesA Fatty acid desaturase [Lipid metabolism] Back     alignment and domain information
>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae Back     alignment and domain information
>PLN02498 omega-3 fatty acid desaturase Back     alignment and domain information
>PLN02505 omega-6 fatty acid desaturase Back     alignment and domain information
>cd03510 Rhizobitoxine-FADS-like This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins Back     alignment and domain information
>cd03513 CrtW_beta-carotene-ketolase Beta-carotene ketolase/oxygenase (CrtW, also known as CrtO), the carotenoid astaxanthin biosynthetic enzyme, initially catalyzes the addition of two keto groups to carbons C4 and C4' of beta-carotene Back     alignment and domain information
>cd03506 Delta6-FADS-like The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria Back     alignment and domain information
>PF00487 FA_desaturase: Fatty acid desaturase This entry is only a subset of the Pfam family Back     alignment and domain information
>cd03507 Delta12-FADS-like The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria Back     alignment and domain information
>KOG4232|consensus Back     alignment and domain information
>cd03512 Alkane-hydroxylase Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases Back     alignment and domain information
>cd01060 Membrane-FADS-like The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins Back     alignment and domain information
>PF08557 Lipid_DES: Sphingolipid Delta4-desaturase (DES); InterPro: IPR013866 Sphingolipids are important membrane signalling molecules involved in many different cellular functions in eukaryotes Back     alignment and domain information
>PLN02220 delta-9 acyl-lipid desaturase Back     alignment and domain information
>COG1398 OLE1 Fatty-acid desaturase [Lipid metabolism] Back     alignment and domain information
>KOG1600|consensus Back     alignment and domain information
>cd03505 Delta9-FADS-like The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.2 bits (111), Expect = 5e-06
 Identities = 62/391 (15%), Positives = 124/391 (31%), Gaps = 114/391 (29%)

Query: 6   SRTDFEWTYTEEPHASRRKEILKKYPEIKKLFGSDPKFK--YIVLSMVLVQFVSMYFLRN 63
            + D  WT   +  ++ +  I     E+++L      ++   +VL  V        F  N
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL-KSKPYENCLLVLLNVQNAKAWNAF--N 263

Query: 64  VSWPVLLTVAYCFGGVINH-SLMLSIHEMAHNLAFGHSRPTANRILSLIAN-----LPI- 116
           +S  +LLT  +    V +  S   + H    + +   +      +L    +     LP  
Sbjct: 264 LSCKILLTTRF--KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 117 ---GIPFAI------------TFKYYHLEHHRYQGDEKLDTDIPTYMEARLFCTTFGKFI 161
                P  +            T+  +     ++   +KL T I + +             
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNW-----KHVNCDKLTTIIESSLN------------ 364

Query: 162 WVCLQP-----FFYAFRPIFTYPKA---PTA-LELF-----NTVVQISFDVFICYFL--- 204
              L+P      F     +F  P +   PT  L L       + V +  +    Y L   
Sbjct: 365 --VLEPAEYRKMFDRL-SVF--PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419

Query: 205 GGRMLSYMLLGSLMAMGLHP---VAGH--FVSEHYMFKKGYETYSYYGPL--NWITFNVG 257
             +  +  +    + + +      A H   V +HY   K +++     P    +   ++G
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIV-DHYNIPKTFDSDDLIPPYLDQYFYSHIG 478

Query: 258 YH---NEHHD----FPAV--------------------PGSRLPMVKKIASEYY-----D 285
           +H    EH +    F  V                     GS L  ++++  ++Y     D
Sbjct: 479 HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL--KFYKPYICD 536

Query: 286 NLPQHHSWSAVLYDFVMDPD----IGPYARM 312
           N P++      + DF+   +       Y  +
Sbjct: 537 NDPKYERLVNAILDFLPKIEENLICSKYTDL 567

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00