Psyllid ID: psy10965

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPNDTLAEEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINYITLYNRFRLSM
cEEEHHHHHHHHHHHHcHHHHHHHHHHHHcccEEEEEccEEEcccccccHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHccccEEEEEcccHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHccccccEEEEcccHHHHHHHHHHcccccccccccccccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEccccccc
ccHHHHHHHHHHHHHccHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHcccccEEEEEEcHHHHHHHHHccccEEEEEcccccccccHHHHccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEcccccccccEEEEEEcccHccc
FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFllggwcmsdeatphysSLIDQMTLGLKYLndtfgecgqprvawqidpfghsaEVALEFAdmgfdgvffgridhEDIALRKknktmemvwrpddtlgpegdfftgvmyniydpppgfcfdtycedepimdnpklhgvnvNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNkenitwpskmdddffpfgsdehsywtgyftsrpsfkyFVYQTNVALQMTKQLktslpndtlAEEQFLIQRAMGIaqhhdavsgterqhvtndYSLYLYEGIQAAMKIINVAYRHLLgdylpeqqpcllmnvsqcelpsptinyITLYNRFRLSM
fvyvetsffwrwweeqNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIalrkknktmemvwrpddtlgpEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPNDTLAEEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVsqcelpsptinYITLYNRFRLSM
FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPNDTLAEEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINYITLYNRFRLSM
*VYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPNDTLAEEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINYITLYNRFR***
FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPNDTLAEEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINYITLYNRFRLS*
FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPNDTLAEEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINYITLYNRFRLSM
FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPNDTLAEEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINYITLYNRFRL**
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FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPNDTLAEEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINYITLYNRFRLSM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query400 2.2.26 [Sep-21-2011]
Q8VHC8 1007 Lysosomal alpha-mannosida yes N/A 0.907 0.360 0.494 1e-103
Q60HE9 1012 Lysosomal alpha-mannosida N/A N/A 0.975 0.385 0.466 1e-102
O09159 1013 Lysosomal alpha-mannosida yes N/A 0.98 0.386 0.473 1e-102
O00754 1011 Lysosomal alpha-mannosida yes N/A 0.98 0.387 0.464 1e-100
O46432 1007 Lysosomal alpha-mannosida N/A N/A 0.98 0.389 0.457 1e-99
Q29451 999 Lysosomal alpha-mannosida yes N/A 0.947 0.379 0.471 1e-99
P34098 1010 Lysosomal alpha-mannosida yes N/A 0.947 0.375 0.436 5e-91
Q54KN4 994 Alpha-mannosidase F OS=Di no N/A 0.892 0.359 0.321 4e-47
Q16706 1144 Alpha-mannosidase 2 OS=Ho no N/A 0.89 0.311 0.313 1e-45
O54782 1018 Epididymis-specific alpha no N/A 0.88 0.345 0.325 7e-45
>sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  377 bits (967), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/372 (49%), Positives = 241/372 (64%), Gaps = 9/372 (2%)

Query: 1   FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLG 60
           FVYVE +FF RWW +Q  + +  V+ LV QGRLEF  GGW M+DEA  HY +++DQMTLG
Sbjct: 114 FVYVEMAFFSRWWHQQTNETQEVVRRLVRQGRLEFANGGWVMNDEAATHYGAIVDQMTLG 173

Query: 61  LKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTM 120
           L++L DTFG  G+PRVAW IDPFGHS E A  FA MGFDGVFFGRID++D  +RKK + M
Sbjct: 174 LRFLEDTFGSDGRPRVAWHIDPFGHSREQASLFAQMGFDGVFFGRIDYQDKLVRKKRREM 233

Query: 121 EMVWRPDDTL-GPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDE 179
           E+VWR   +L  P  D FTGV+ N Y PP G C+D  C D P++D+P+    N    V  
Sbjct: 234 ELVWRASASLKAPAADLFTGVLPNNYGPPEGLCWDVLCADPPVVDDPRSPEYNAKKLVSY 293

Query: 180 FIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKL--NSDVHVLYST 237
           F+++     + YRTN+ ++TMG DF Y  A+ WFKN+DKLI+ VN +    S VHVLYST
Sbjct: 294 FLQLATAQGRYYRTNHTVMTMGSDFQYENANTWFKNLDKLIQLVNMQQANGSRVHVLYST 353

Query: 238 PACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQ 297
           PACYL  LNK N+TWP K +DDFFP+    H +WTGYF+SRP+ K +   +   LQ+  Q
Sbjct: 354 PACYLWELNKANLTWPVK-EDDFFPYADGPHMFWTGYFSSRPALKRYERLSYNFLQVCNQ 412

Query: 298 LKTSL-PNDTLAE----EQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMK 352
           L+  + P   +      +   + +AM + QHHDAVSGT +QHV +DY+  L  G      
Sbjct: 413 LEAQVGPAANVGPYGHGDSSPLNQAMAVLQHHDAVSGTSKQHVADDYARQLAAGWGPCEV 472

Query: 353 IINVAYRHLLGD 364
           +++ A   L G 
Sbjct: 473 LLSNALAKLSGS 484
Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover.
Cavia porcellus (taxid: 10141)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4
>sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 Back     alignment and function description
>sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 Back     alignment and function description
>sp|Q54KN4|MANF_DICDI Alpha-mannosidase F OS=Dictyostelium discoideum GN=manF PE=3 SV=1 Back     alignment and function description
>sp|Q16706|MA2A1_HUMAN Alpha-mannosidase 2 OS=Homo sapiens GN=MAN2A1 PE=1 SV=2 Back     alignment and function description
>sp|O54782|MA2B2_MOUSE Epididymis-specific alpha-mannosidase OS=Mus musculus GN=Man2b2 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
193580067 1003 PREDICTED: lysosomal alpha-mannosidase-l 0.98 0.390 0.604 1e-145
321463090 960 hypothetical protein DAPPUDRAFT_252189 [ 0.982 0.409 0.541 1e-124
321463091 968 hypothetical protein DAPPUDRAFT_324591 [ 0.992 0.410 0.527 1e-124
157111152 959 lysosomal alpha-mannosidase (mannosidase 0.98 0.408 0.527 1e-121
321463174 963 hypothetical protein DAPPUDRAFT_324586 [ 0.975 0.404 0.527 1e-121
321449456 752 hypothetical protein DAPPUDRAFT_337859 [ 0.985 0.523 0.522 1e-120
157111154 997 lysosomal alpha-mannosidase (mannosidase 0.972 0.390 0.527 1e-120
198431453 991 PREDICTED: similar to lysosomal alpha-ma 0.962 0.388 0.519 1e-118
170061344 1012 lysosomal alpha-mannosidase [Culex quinq 0.957 0.378 0.5 1e-117
307213360 983 Lysosomal alpha-mannosidase [Harpegnatho 0.97 0.394 0.503 1e-116
>gi|193580067|ref|XP_001946748.1| PREDICTED: lysosomal alpha-mannosidase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 240/397 (60%), Positives = 304/397 (76%), Gaps = 5/397 (1%)

Query: 1   FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLG 60
           FV+VET+F WRWWEEQ+E  R S+K LV +GRL+ L GGW MSDEA PHYS+LIDQMTLG
Sbjct: 117 FVFVETAFLWRWWEEQDEWNRNSLKTLVHEGRLQLLHGGWVMSDEAVPHYSTLIDQMTLG 176

Query: 61  LKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTM 120
           LK+LN+TFGEC +PRVAWQIDPFGHS+EVA EFA+MGFDG+  GRIDHED+ALRK+ KTM
Sbjct: 177 LKFLNETFGECARPRVAWQIDPFGHSSEVAAEFAEMGFDGLVLGRIDHEDLALRKQQKTM 236

Query: 121 EMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEF 180
           EMVWRPD  +G  G+ FT V+YN+Y  P GFCFD +C D+PI+DNPKLHG NVNA+V+ F
Sbjct: 237 EMVWRPDVNMGQGGELFTSVLYNLYVAPEGFCFDAFCNDDPILDNPKLHGYNVNAKVENF 296

Query: 181 IEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSDVHVLYSTPAC 240
              VK+YA A++TNN++ITMGGDF Y VAS+WF+N+DKLIK+VN  L  D++VLYSTP C
Sbjct: 297 ANHVKRYASAFKTNNIMITMGGDFSYSVASSWFRNMDKLIKHVNI-LKPDLNVLYSTPEC 355

Query: 241 YLQAL--NKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQL 298
           YL AL  + +N+TWP K  DDFFP+  DEHSYWTGYFTSR + KY + + N  LQ  KQ+
Sbjct: 356 YLSALQMSSKNVTWPLKDSDDFFPYAHDEHSYWTGYFTSRSNLKYMICKANNLLQAVKQI 415

Query: 299 KTSLPNDTLAEEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAY 358
            + L  + L E    +  A+  +QHHDA++GTE+QHV++DY+ YL EGI  + K++  AY
Sbjct: 416 GSILGGE-LNEHVQTLAIAVAQSQHHDAITGTEKQHVSDDYAQYLDEGIGESQKVLTAAY 474

Query: 359 RHLLGDYLPEQQPCLLMNVSQCELPSPTINY-ITLYN 394
           R   G   PEQQ C ++N+S+C++      + ITLYN
Sbjct: 475 RKWFGKDFPEQQYCKMLNISECDVSENNSKFVITLYN 511

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|321463090|gb|EFX74108.1| hypothetical protein DAPPUDRAFT_252189 [Daphnia pulex] Back     alignment and taxonomy information
>gi|321463091|gb|EFX74109.1| hypothetical protein DAPPUDRAFT_324591 [Daphnia pulex] Back     alignment and taxonomy information
>gi|157111152|ref|XP_001651411.1| lysosomal alpha-mannosidase (mannosidase alpha class 2b member 1) [Aedes aegypti] gi|108878514|gb|EAT42739.1| AAEL005752-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|321463174|gb|EFX74192.1| hypothetical protein DAPPUDRAFT_324586 [Daphnia pulex] Back     alignment and taxonomy information
>gi|321449456|gb|EFX61897.1| hypothetical protein DAPPUDRAFT_337859 [Daphnia pulex] Back     alignment and taxonomy information
>gi|157111154|ref|XP_001651412.1| lysosomal alpha-mannosidase (mannosidase alpha class 2b member 1) [Aedes aegypti] gi|108878515|gb|EAT42740.1| AAEL005763-PA, partial [Aedes aegypti] Back     alignment and taxonomy information
>gi|198431453|ref|XP_002124863.1| PREDICTED: similar to lysosomal alpha-mannosidase (109.3 kD) (XF355) [Ciona intestinalis] Back     alignment and taxonomy information
>gi|170061344|ref|XP_001866195.1| lysosomal alpha-mannosidase [Culex quinquefasciatus] gi|167879596|gb|EDS42979.1| lysosomal alpha-mannosidase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|307213360|gb|EFN88812.1| Lysosomal alpha-mannosidase [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
ZFIN|ZDB-GENE-050327-52 982 man2b1 "mannosidase, alpha, cl 0.98 0.399 0.523 4.2e-111
FB|FBgn0027611 1080 LM408 "Lysosomal alpha-mannosi 0.982 0.363 0.482 8.6e-104
FB|FBgn0032069 1007 CG9468 [Drosophila melanogaste 0.972 0.386 0.487 2.3e-101
FB|FBgn0032253 950 CG5322 [Drosophila melanogaste 0.977 0.411 0.492 1.9e-99
FB|FBgn0032068 982 CG9466 [Drosophila melanogaste 0.972 0.396 0.475 2.4e-99
UNIPROTKB|F1SEY1 1008 MAN2B1 "Uncharacterized protei 0.98 0.388 0.477 2e-97
MGI|MGI:107286 1013 Man2b1 "mannosidase 2, alpha B 0.98 0.386 0.473 2.5e-97
UNIPROTKB|G5E928 1010 MAN2B1 "Mannosidase, alpha, cl 0.98 0.388 0.467 7.6e-96
UNIPROTKB|O00754 1011 MAN2B1 "Lysosomal alpha-mannos 0.98 0.387 0.466 1.6e-95
UNIPROTKB|F1PKB2 1007 MAN2B1 "Uncharacterized protei 0.98 0.389 0.459 3.3e-95
ZFIN|ZDB-GENE-050327-52 man2b1 "mannosidase, alpha, class 2B, member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 1097 (391.2 bits), Expect = 4.2e-111, P = 4.2e-111
 Identities = 211/403 (52%), Positives = 273/403 (67%)

Query:     1 FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLG 60
             F+YVET+FF+RWW +QN+  R  V +LV++GRLEF+ GGWCMSDEAT HYS++IDQMTLG
Sbjct:    97 FIYVETAFFYRWWRQQNQNTRRIVTQLVNEGRLEFINGGWCMSDEATTHYSAVIDQMTLG 156

Query:    61 LKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTM 120
             L++LNDTFGECG+PRVAW IDPFGH+ E A  FA MG+DG FFGR+D++D   R K K M
Sbjct:   157 LRFLNDTFGECGRPRVAWHIDPFGHAREHASIFAQMGYDGFFFGRLDYQDKDRRMKTKEM 216

Query:   121 EMVWRPDDTLGPE-GDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDE 179
             EM+WR  ++L P   D FTGV+ N Y+PP GFC+D  C+D PI D+P L   NV+  V +
Sbjct:   217 EMLWRASESLTPPIADLFTGVLPNGYNPPEGFCWDQSCDDAPIRDDPDLEDYNVDEIVQK 276

Query:   180 FIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNA--KLNSDVHVLYST 237
             F+    K A  Y+TN++I+TMG DF Y  A+ W+KN+DKLIKYVNA     S ++VLYST
Sbjct:   277 FLNASHKQADYYKTNHIIMTMGSDFQYENANLWYKNMDKLIKYVNALQAKGSKLNVLYST 336

Query:   238 PACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQ 297
             P+CYLQ LN  N TWP K DD FFP+  D H +WTGYFTSRP+ K +   +N  LQ   Q
Sbjct:   337 PSCYLQELNLANFTWPMKTDD-FFPYADDAHDFWTGYFTSRPALKLYERLSNSRLQTCNQ 395

Query:   298 LKT-SLPNDT---LAE-EQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMK 352
             L+    P  T     E +   ++RAMG+AQHHDAVSGTE+QHV NDY+  L  G      
Sbjct:   396 LEVLGGPTSTSGPFGEGDSDTMRRAMGVAQHHDAVSGTEKQHVANDYARRLATGWAHCEV 455

Query:   353 IINVAYRHLLGDYLPEQQPCLLMNVSQCELPSPTINY-ITLYN 394
             +++ +   L G   P    C  +N+S C L   +  + + +YN
Sbjct:   456 LVSNSLAVLSGSEAPRVF-CENLNISVCPLTESSHKFSMNVYN 497
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004559 "alpha-mannosidase activity" evidence=IEA
GO:0015923 "mannosidase activity" evidence=IEA
GO:0006013 "mannose metabolic process" evidence=IEA
GO:0005575 "cellular_component" evidence=ND
FB|FBgn0027611 LM408 "Lysosomal alpha-mannosidase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0032069 CG9468 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0032253 CG5322 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0032068 CG9466 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1SEY1 MAN2B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:107286 Man2b1 "mannosidase 2, alpha B1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
cd10810278 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic 1e-140
cd00451258 cd00451, GH38N_AMII_euk, N-terminal catalytic doma 4e-86
pfam01074269 pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam 2e-69
cd10809340 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal 1e-61
PLN02701 1050 PLN02701, PLN02701, alpha-mannosidase 8e-53
cd10786251 cd10786, GH38N_AMII_like, N-terminal catalytic dom 1e-43
cd11666344 cd11666, GH38N_Man2A1, N-terminal catalytic domain 9e-43
cd10811326 cd10811, GH38N_AMII_Epman_like, N-terminal catalyt 5e-41
cd11667344 cd11667, GH38N_Man2A2, N-terminal catalytic domain 1e-36
pfam0926182 pfam09261, Alpha-mann_mid, Alpha mannosidase, midd 7e-18
smart0087279 smart00872, Alpha-mann_mid, Alpha mannosidase, mid 8e-14
cd10812258 cd10812, GH38N_AMII_ScAms1_like, N-terminal cataly 2e-06
cd10789252 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catal 2e-06
cd10814271 cd10814, GH38N_AMII_SpGH38_like, N-terminal cataly 3e-05
cd10815270 cd10815, GH38N_AMII_EcMngB_like, N-terminal cataly 0.001
cd10790273 cd10790, GH38N_AMII_1, N-terminal catalytic domain 0.001
>gnl|CDD|212121 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information 
 Score =  400 bits (1031), Expect = e-140
 Identities = 141/225 (62%), Positives = 170/225 (75%)

Query: 1   FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLG 60
           F+YVE +FF RWW EQ+E  R  VK+LV  G+LEF+ GGWCM+DEAT HY  +IDQMTLG
Sbjct: 54  FIYVEIAFFSRWWREQSEDTRQKVKKLVKNGQLEFINGGWCMNDEATTHYEDIIDQMTLG 113

Query: 61  LKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTM 120
            ++L DTFGEC +PRV WQIDPFGHS   A  FA MGFDG+FFGRID++D A R KNK M
Sbjct: 114 HQFLKDTFGECARPRVGWQIDPFGHSRTQASLFAQMGFDGLFFGRIDYQDKAQRLKNKEM 173

Query: 121 EMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDEF 180
           E +WR   +LGP+ D FTGV+YN Y PPPGFCFD  C DEPI D+P L   NV+ RVD+F
Sbjct: 174 EFIWRGSPSLGPDADIFTGVLYNHYGPPPGFCFDILCGDEPIQDDPNLEDYNVDERVDDF 233

Query: 181 IEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNA 225
           ++  K+ AQ YRTN++++TMG DF Y  A  WFKN+DKLIKYVN 
Sbjct: 234 VQYAKEQAQHYRTNHIMLTMGSDFQYQNAEMWFKNMDKLIKYVNK 278

The subfamily is represented by lysosomal alpha-mannosidase (LAM, Man2B1, EC 3.2.1.114), which is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. LAM is expressed in all tissues and in many species. In mammals, the absence of LAM can cause the autosomal recessive disease alpha-mannosidosis. LAM has an acidic pH optimum at 4.0-4.5. It is stimulated by zinc ion and is inhibited by cobalt ion and plant alkaloids, such as swainsonine (SW). LAM catalyzes hydrolysis by a double displacement mechanism in which a glycosyl-enzyme intermediate is formed and hydrolyzed via oxacarbenium ion-like transition states. A carboxylic acid in the active site acts as the catalytic nucleophile in the formation of the covalent intermediate while a second carboxylic acid acts as a general acid catalyst. The same residue is thought to assist in the hydrolysis (deglycosylation) step, this time acting as a general base. Length = 278
>gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain Back     alignment and domain information
>gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase Back     alignment and domain information
>gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212122 cd10811, GH38N_AMII_Epman_like, N-terminal catalytic domain of mammalian core-specific lysosomal alpha 1,6-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information
>gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information
>gnl|CDD|212123 cd10812, GH38N_AMII_ScAms1_like, N-terminal catalytic domain of yeast vacuolar alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212101 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catalytic domain of endoplasmic reticulum(ER)/cytosolic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212125 cd10814, GH38N_AMII_SpGH38_like, N-terminal catalytic domain of SPGH38, a putative alpha-mannosidase of Streptococcus pyogenes, and its prokaryotic homologs; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212126 cd10815, GH38N_AMII_EcMngB_like, N-terminal catalytic domain of Escherichia coli alpha-mannosidase MngB and its bacterial homologs; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212102 cd10790, GH38N_AMII_1, N-terminal catalytic domain of putative prokaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 400
KOG1959|consensus 996 100.0
PLN02701 1050 alpha-mannosidase 100.0
KOG1958|consensus 1129 100.0
PRK09819 875 alpha-mannosidase; Provisional 100.0
KOG4342|consensus 1078 100.0
PF01074275 Glyco_hydro_38: Glycosyl hydrolases family 38 N-te 100.0
COG0383 943 AMS1 Alpha-mannosidase [Carbohydrate transport and 100.0
PF0926180 Alpha-mann_mid: Alpha mannosidase, middle domain; 99.91
smart0087279 Alpha-mann_mid Alpha mannosidase, middle domain. M 99.89
COG0383 943 AMS1 Alpha-mannosidase [Carbohydrate transport and 99.82
PF03065360 Glyco_hydro_57: Glycosyl hydrolase family 57; Inte 98.34
COG1543504 Uncharacterized conserved protein [Function unknow 97.09
PF01522123 Polysacc_deac_1: Polysaccharide deacetylase; Inter 95.8
TIGR03212297 uraD_N-term-dom putative urate catabolism protein. 95.59
COG1449615 Alpha-amylase/alpha-mannosidase [Carbohydrate tran 94.31
TIGR02884224 spore_pdaA delta-lactam-biosynthetic de-N-acetylas 92.78
TIGR02764191 spore_ybaN_pdaB polysaccharide deacetylase family 92.77
TIGR03006265 pepcterm_polyde polysaccharide deactylase family p 91.29
TIGR02873268 spore_ylxY probable sporulation protein, polysacch 89.02
PRK15394296 4-deoxy-4-formamido-L-arabinose-phosphoundecapreno 82.97
PRK14582 671 pgaB outer membrane N-deacetylase; Provisional 82.02
>KOG1959|consensus Back     alignment and domain information 
Probab=100.00  E-value=9.6e-105  Score=806.65  Aligned_cols=398  Identities=54%  Similarity=0.979  Sum_probs=385.5

Q ss_pred             CEEeeHHHHHHHHhhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeec
Q psy10965          1 FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQI   80 (400)
Q Consensus         1 F~~~E~~~~~~W~~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~   80 (400)
                      ||++|++||.|||++++++.++.||+||++|||||+||||+|+|||.++|.++|+|++.|++|+.++||+|.+|++||++
T Consensus        90 FI~VE~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqI  169 (996)
T KOG1959|consen   90 FIYVETAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQI  169 (996)
T ss_pred             eehhhHHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeee
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHCCCCceeeecccHHHHHHhhhCCcceEEEecCCCCCCCcceeeeecCCCCCCCCCCCccCCCCCC
Q psy10965         81 DPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYNIYDPPPGFCFDTYCEDE  160 (400)
Q Consensus        81 D~FGhs~~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~~~~~F~W~g~dg~~~~s~v~t~~~~~~Y~~~~~~~~d~~~~~~  160 (400)
                      ||||||+.+|.||++||+++.+|.|+++.+|..|...+.+||+|+|++.++++++|||++|+++|++|++||||..|.+.
T Consensus       170 DPFGHSreqAslfAqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P~gfc~dv~c~d~  249 (996)
T KOG1959|consen  170 DPFGHSREQASLFAQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPPPGFCFDVLCGDD  249 (996)
T ss_pred             CCCCcchHHHHHHHHhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCCCCceeccccCCC
Confidence            99999999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             CccCCCCccccchhhhHHHHHHHHHHHhhhcCCCceEEeeeCCCCCcchhHHHHHHHHHHHHHHccC--CCCeEEEecCh
Q psy10965        161 PIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKL--NSDVHVLYSTP  238 (400)
Q Consensus       161 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~il~~~G~D~~~~~a~~~f~~~~~li~~~n~~~--~~~~~i~~sT~  238 (400)
                      |++|++.+.++|++++++.|++.++.++..|+|||||+|+|+||.|.+|..||+|||+||+++|++.  +..+++.||||
T Consensus       250 Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTp  329 (996)
T KOG1959|consen  250 PIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQADGSKVNVFYSTP  329 (996)
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcCh
Confidence            9999998999999999999999999999999999999999999999999999999999999999774  67899999999


Q ss_pred             HHHHHHHHhcCCCCCCccCCCcccCCCCCCCccceeeecchhhHHHHHHHHHHHHHHHHHHhhCCCCc--ChHHHHHHHH
Q psy10965        239 ACYLQALNKENITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQMTKQLKTSLPNDT--LAEEQFLIQR  316 (400)
Q Consensus       239 ~~yf~~l~~~~~~lpv~~~gel~~~~~~~~~yw~G~ytSr~~lK~~~r~~e~~L~~ae~l~~l~~~~~--~~~~l~~~w~  316 (400)
                      ++|++++++.+..||+. +.|||||++++|+||||||||||.+|++.|++.+.|++|++|++++.+..  ..+.++.+++
T Consensus       330 scYl~alh~~~~Twp~K-t~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lre  408 (996)
T KOG1959|consen  330 SCYLNALHAANQTWPVK-TDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLRE  408 (996)
T ss_pred             HHHHHHHHHhcCccccc-ccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCccccCccHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999999999999843  3368999999


Q ss_pred             HHHhhhcccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccccccccccCCCC-CCCeE-EEEEc
Q psy10965        317 AMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLPEQQPCLLMNVSQCELPS-PTINY-ITLYN  394 (400)
Q Consensus       317 ~l~~~q~HD~ItGTs~~~V~~d~~~~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~n~s~~~~~~-~~~~~-~~v~N  394 (400)
                      ++++.||||+||||++++|.+||.++|..++..++.++.++++.|....+..+..|.++|+|.||.++ .++++ ++|||
T Consensus       409 am~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~~~~f~~C~~lNiS~C~~t~~~~~~~~v~~YN  488 (996)
T KOG1959|consen  409 AMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLPNGEFQSCLLLNISECAFTKDGADNFIVTLYN  488 (996)
T ss_pred             HHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhhhhccccCCCCcCCcCcEEEEEEc
Confidence            99999999999999999999999999999999999999999999998777789999999999999994 66778 99999


Q ss_pred             CCCCC
Q psy10965        395 RFRLS  399 (400)
Q Consensus       395 p~~~~  399 (400)
                      ||+|.
T Consensus       489 pLa~~  493 (996)
T KOG1959|consen  489 PLAHT  493 (996)
T ss_pred             CCcce
Confidence            99996

>PLN02701 alpha-mannosidase Back     alignment and domain information
>KOG1958|consensus Back     alignment and domain information
>PRK09819 alpha-mannosidase; Provisional Back     alignment and domain information
>KOG4342|consensus Back     alignment and domain information
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold Back     alignment and domain information
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1543 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase Back     alignment and domain information
>TIGR03212 uraD_N-term-dom putative urate catabolism protein Back     alignment and domain information
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase Back     alignment and domain information
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB Back     alignment and domain information
>TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily Back     alignment and domain information
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family Back     alignment and domain information
>PRK15394 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
1o7d_A298 The Structure Of The Bovine Lysosomal A-Mannosidase 2e-69
1hxk_A 1015 Golgi Alpha-Mannosidase Ii In Complex With Deoxyman 8e-38
3dx3_A 1045 Golgi Alpha-Mannosidase Ii In Complex With Mannosta 9e-38
1ps3_A 1045 Golgi Alpha-mannosidase Ii In Complex With Kifunens 9e-38
1qwn_A 1045 Golgi Alpha-Mannosidase Ii Covalent Intermediate Co 9e-38
1qwu_A 1045 Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit 3e-37
3cv5_A 1045 Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu 6e-37
1hty_A 1015 Golgi Alpha-Mannosidase Ii Length = 1015 8e-36
1o7d_B84 The Structure Of The Bovine Lysosomal A-Mannosidase 2e-13
1o7d_C159 The Structure Of The Bovine Lysosomal A-Mannosidase 2e-08
>pdb|1O7D|A Chain A, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 298 Back     alignment and structure 
Iteration: 1

 Score =  259 bits (661), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 118/231 (51%), Positives = 158/231 (68%), Gaps = 1/231 (0%)
Query: 1   FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLG 60
           F+YVE +FF RWW +Q    +  V+ELV QGRLEF  GGW M+DEAT HY ++IDQMTLG
Sbjct: 67  FIYVEIAFFSRWWRQQTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLG 126
Query: 61  LKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTM 120
           L++L +TFG  G+PRVAW IDPFGHS E A  FA MGFDG FFGR+D++D  +RKK   M
Sbjct: 127 LRFLEETFGSDGRPRVAWHIDPFGHSREQASLFAQMGFDGFFFGRLDYQDKKVRKKTLQM 186
Query: 121 EMVWRPDDTLG-PEGDFFTGVMYNIYDPPPGFCFDTYCEDEPIMDNPKLHGVNVNARVDE 179
           E VWR   +L  P  D FT V+ N+Y+PP G C+D  C D+P++++ +    N    V  
Sbjct: 187 EQVWRASTSLKPPTADLFTSVLPNMYNPPEGLCWDMLCADKPVVEDTRSPEYNAKELVRY 246
Query: 180 FIEVVKKYAQAYRTNNVIITMGGDFHYVVASAWFKNIDKLIKYVNAKLNSD 230
           F+++     + YRT + ++TMG DF Y  A+ WFKN+DKLI+ VNA+  ++
Sbjct: 247 FLKLATDQGKLYRTKHTVMTMGSDFQYENANTWFKNLDKLIQLVNAQQRAN 297
>pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 Back     alignment and structure
>pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 Back     alignment and structure
>pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 Back     alignment and structure
>pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 Back     alignment and structure
>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 Back     alignment and structure
>pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 Back     alignment and structure
>pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 Back     alignment and structure
>pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84 Back     alignment and structure
>pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
3bvx_A 1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 1e-99
1o7d_A298 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 1e-89
2wyh_A 923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 2e-60
3lvt_A 899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 4e-59
1o7d_B84 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 6e-28
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 1e-15
1k1x_A 659 4-alpha-glucanotransferase; 2.40A {Thermococcus li 8e-05
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 Back     alignment and structure
 Score =  317 bits (813), Expect = 1e-99
 Identities = 100/412 (24%), Positives = 179/412 (43%), Gaps = 30/412 (7%)

Query: 1   FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLG 60
           F++ E S+F R++ +  E  +  +K +V  G+LEF+ GGW M DEA  H+ +++ Q+T G
Sbjct: 126 FIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEG 185

Query: 61  LKYLNDTFGECGQPRVAWQIDPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTM 120
             +L         P  +W I PFGHS  +       GF  +   R  +       + + +
Sbjct: 186 QTWLKQFMNVT--PTASWAIAPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQL 243

Query: 121 EMVWRPDDTLGPEGDFFTGVM-YNIYDPPPGFCFD--------------TYCEDEPIMDN 165
           E +WR       +   FT +M +  YD P     D                      +  
Sbjct: 244 EFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPP 303

Query: 166 PKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAW---FKNIDKLIKY 222
             +   NV AR D  ++  KK A+ YRTN ++I +G DF +   + W     N ++L ++
Sbjct: 304 RTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEH 363

Query: 223 VNAKLNSDVHVLYSTPACYLQALNKENITWPSKM---DDDFFPFGSDEHSYWTGYFTSRP 279
           +N++ + +V   + T   Y  A+++      ++      DFF +     +YW+GY+TSRP
Sbjct: 364 INSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRP 423

Query: 280 SFKYFVYQTNVALQMTKQLKTSLPNDTLAEEQFLIQRA---MGIAQHHDAVSGTERQHVT 336
             K         ++  + L      D +A  +  +++A   + + QHHD ++GT + HV 
Sbjct: 424 YHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVV 483

Query: 337 NDYSLYLYEGIQAAMKIINVAYRHLLGD----YLPEQQPCLLMNVSQCELPS 384
            DY   + E ++A   ++  +   LL                ++ S+     
Sbjct: 484 VDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSG 535
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298 Back     alignment and structure
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923 Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 Back     alignment and structure
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 Back     alignment and structure
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* Length = 659 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
3bvx_A 1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 100.0
2wyh_A 923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 100.0
3lvt_A 899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 100.0
1o7d_A298 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 100.0
1o7d_B84 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.87
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.8
1k1x_A 659 4-alpha-glucanotransferase; 2.40A {Thermococcus li 99.68
3p0b_A540 TT1467 protein; glycoside hydrolase GH57, glycogen 99.05
2b5d_X528 Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2. 98.72
3n98_A562 Alpha-amylase, GH57 family; GH57 family member, br 98.52
3rxz_A300 Polysaccharide deacetylase; structural genomics, P 96.25
3s6o_A321 Polysaccharide deacetylase family protein; ssgcid, 95.3
3cl6_A308 PUUE allantoinase; URIC acid, nitrogen fixation, h 94.19
2iw0_A254 Chitin deacetylase; hydrolase, chitin DE-N-acetyla 89.79
2cc0_A195 Acetyl-xylan esterase; hydrolase, carbohydrate est 89.27
2c71_A216 Glycoside hydrolase, family 11\:clostridium cellul 89.23
1ny1_A240 Probable polysaccharide deacetylase PDAA; structur 88.98
2y8u_A230 Chitin deacetylase; hydrolase; 1.99A {Emericella n 88.81
2j13_A247 Polysaccharide deacetylase; family 4, peptidoglyca 88.47
3vus_A268 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; 87.37
3qbu_A326 Putative uncharacterized protein; metallo enzyme, 86.32
2vyo_A254 ECU11_0510, chitooligosaccharide deacetylase; CE4 84.83
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Back     alignment and structure
Probab=100.00  E-value=2.7e-83  Score=705.90  Aligned_cols=392  Identities=27%  Similarity=0.485  Sum_probs=337.2

Q ss_pred             CEEeeHHHHHHHHhhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeec
Q psy10965          1 FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQI   80 (400)
Q Consensus         1 F~~~E~~~~~~W~~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~   80 (400)
                      |+|+|++||++||++++|+.+++||+||++||||++||+|||+||++++|||+||||++|++|++++||  ..|++||+|
T Consensus       126 F~~~e~~~l~~w~~e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG--~~~~~~W~p  203 (1045)
T 3bvx_A          126 FIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMN--VTPTASWAI  203 (1045)
T ss_dssp             EEECCHHHHHHHHHHSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHC--CCCCEEEEC
T ss_pred             EEEecHHHHHHHHHHCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhC--CCCceEEcC
Confidence            899999999999999999999999999999999999999999999999999999999999999999999  889999999


Q ss_pred             CCCCCCHHHHHHHHHCCCCceeeecccHHHHHHhhhCCcceEEEe----cCCCCCCCcceeeeecC-CCCC------CCC
Q psy10965         81 DPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWR----PDDTLGPEGDFFTGVMY-NIYD------PPP  149 (400)
Q Consensus        81 D~FGhs~~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~~~~~F~W~----g~dg~~~~s~v~t~~~~-~~Y~------~~~  149 (400)
                      |+||||+++||||+++||++++++|++|++++.++..++++|+|+    |+||    ++||||++| .+|+      +++
T Consensus       204 D~FG~s~~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dG----s~Ilt~~~p~~~Y~~~~~~gp~~  279 (1045)
T 3bvx_A          204 APFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGD----TALFTHMMPFYSYDIPHTCGPDP  279 (1045)
T ss_dssp             CSSSBCTHHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCT----TCEEEEECCSSCSSGGGTSSSCH
T ss_pred             CCCCccHHHHHHHHHcCCCeEEEecccccccccccccCCceEEEeCCCCCCCC----CeEEEEeccccccCcccccCCCc
Confidence            999999999999999999999999999999998888889999999    7888    999999998 4675      233


Q ss_pred             CCC--ccCCC--C---CCCccCC-CCccccchhhhHHHHHHHHHHHhhhcCCCceEEeeeCCCCCcchhHH---HHHHHH
Q psy10965        150 GFC--FDTYC--E---DEPIMDN-PKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAW---FKNIDK  218 (400)
Q Consensus       150 ~~~--~d~~~--~---~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~il~~~G~D~~~~~a~~~---f~~~~~  218 (400)
                      +||  ||+..  .   ..|..++ ..+.+.|++++++.+++++++.+..|.++++|+|+|+||++.++.+|   |++|++
T Consensus       280 ~~c~~fdf~~l~~~~~~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~  359 (1045)
T 3bvx_A          280 KVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYER  359 (1045)
T ss_dssp             HHHGGGCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccCcccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHH
Confidence            444  33210  0   0111111 13456789999999999999988889999999999999999987654   899999


Q ss_pred             HHHHHHccCCCCeEEEecChHHHHHHHHhcC----CCCCCccCCCcccCCCCCCCccceeeecchhhHHHHHHHHHHHHH
Q psy10965        219 LIKYVNAKLNSDVHVLYSTPACYLQALNKEN----ITWPSKMDDDFFPFGSDEHSYWTGYFTSRPSFKYFVYQTNVALQM  294 (400)
Q Consensus       219 li~~~n~~~~~~~~i~~sT~~~yf~~l~~~~----~~lpv~~~gel~~~~~~~~~yw~G~ytSr~~lK~~~r~~e~~L~~  294 (400)
                      +|+++|+.++..++++|||+++||+++++..    ..||++ +|||+||.++.++||+|||||||++|+++|++|++|++
T Consensus       360 li~~in~~~~~~~~v~~sT~~~yf~~l~~~~~~~~~~lp~~-~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~  438 (1045)
T 3bvx_A          360 LFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTL-SGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRA  438 (1045)
T ss_dssp             HHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEE-ESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhCCCCCceEEECCHHHHHHHHHhhcccccccCccc-CCcccccccCCcccccceecccHHHHHHHHHHHHHHHH
Confidence            9999998753368999999999999998753    369999 99999999888899999999999999999999999999


Q ss_pred             HHHHHhhCCC--CcCh-HHHHHHHHHHHhhhcccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC----
Q psy10965        295 TKQLKTSLPN--DTLA-EEQFLIQRAMGIAQHHDAVSGTERQHVTNDYSLYLYEGIQAAMKIINVAYRHLLGDYLP----  367 (400)
Q Consensus       295 ae~l~~l~~~--~~~~-~~l~~~w~~l~~~q~HD~ItGTs~~~V~~d~~~~l~~a~~~~~~~~~~~~~~l~~~~~~----  367 (400)
                      ||.|++++.+  ..|| +.|+++|+.|+++||||+|||||+++|++||..||.+|.+.++.+++.+++.|+.....    
T Consensus       439 aE~l~ala~~~~~~~~~~~L~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~~~~~  518 (1045)
T 3bvx_A          439 AEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPD  518 (1045)
T ss_dssp             HHHHHHTSCCCGGGCHHHHHHHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTTCCCC
T ss_pred             HHHHHHHHHhcCCCccHHHHHHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            9999999986  3567 58999999999999999999999999999999999999999999999999999842110    


Q ss_pred             ------CCcccccccccccCCCC----CCC---eE-EEEEcCCCCC
Q psy10965        368 ------EQQPCLLMNVSQCELPS----PTI---NY-ITLYNRFRLS  399 (400)
Q Consensus       368 ------~~~~~~~~n~s~~~~~~----~~~---~~-~~v~Np~~~~  399 (400)
                            +...|...+.+.||...    ..+   .. ++|||||+|+
T Consensus       519 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vvvfN~L~~~  564 (1045)
T 3bvx_A          519 FSFSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHW  564 (1045)
T ss_dssp             TTSCSEEEECSSSSCTTTCCCCCEECCBTTTBSEEEEEEEECSSSC
T ss_pred             ccccccchhhhcccccccccccccccccccccCCceEEEEcCCCcc
Confidence                  01112224455565431    122   45 9999999996
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Back     alignment and structure
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Back     alignment and structure
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Back     alignment and structure
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* Back     alignment and structure
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A Back     alignment and structure
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4 Back     alignment and structure
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A* Back     alignment and structure
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis} Back     alignment and structure
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6 Back     alignment and structure
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A Back     alignment and structure
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3 Back     alignment and structure
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3 Back     alignment and structure
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A Back     alignment and structure
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1 Back     alignment and structure
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans} Back     alignment and structure
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3 Back     alignment and structure
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli} Back     alignment and structure
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori} Back     alignment and structure
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 400
g1o7d.3330 c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno 2e-88
d3bvua3381 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru 9e-82
d1k1xa3310 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te 6e-23
g1o7d.195 a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann 1e-22
d3bvua1111 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr 7e-21
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381 Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310 Back     information, alignment and structure
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
d3bvua3381 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
g1o7d.3330 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
d3bvua1111 Golgi alpha-mannosidase II {Fruit fly (Drosophila 99.96
g1o7d.195 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 99.95
d1k1xa3310 4-alpha-glucanotransferase, N-terminal domain {Arc 99.91
d1ufaa2412 Hypothetical protein TT1467, N-terminal domain {Th 98.16
d2b5dx2404 Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 98.03
d1z7aa1301 Hypothetical protein PA1517 {Pseudomonas aeruginos 96.76
d2j13a1235 Putative polysaccharide deacetylase BA0424 {Bacill 89.65
d2cc0a1192 Acetyl-xylan esterase {Streptomyces lividans [TaxI 88.66
d1ny1a_235 Probable polysaccharide deacetylase PdaA {Bacillus 88.18
d2iw0a1220 Chitin deacetylase {Bean anthracnose fungus (Colle 85.49
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: 7-stranded beta/alpha barrel
superfamily: Glycoside hydrolase/deacetylase
family: alpha-mannosidase
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.9e-63  Score=487.39  Aligned_cols=263  Identities=28%  Similarity=0.519  Sum_probs=233.4

Q ss_pred             CEEeeHHHHHHHHhhhCHHHHHHHHHHHHcCceEEEcceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcceeeec
Q psy10965          1 FVYVETSFFWRWWEEQNEQVRASVKELVDQGRLEFLLGGWCMSDEATPHYSSLIDQMTLGLKYLNDTFGECGQPRVAWQI   80 (400)
Q Consensus         1 F~~~E~~~~~~W~~~~~p~~~~~vk~lV~~Grle~vgg~~v~~De~l~~~Eslirql~~G~~~~~~~fG~~~~~~v~w~~   80 (400)
                      |+|+|++||.+||++++|+.+++||+||++||||||||||||+||+++++||+||||++|++|++++||  ..|++||+|
T Consensus        96 F~~~~~~~~~~w~~~~~pe~~~~vk~lV~~GrlEivgg~wv~~De~~~~~es~Irql~~G~~~l~~~fG--~~p~~~w~~  173 (381)
T d3bvua3          96 FIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMN--VTPTASWAI  173 (381)
T ss_dssp             EEECCHHHHHHHHTTSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHC--CCCCEEEEC
T ss_pred             EEEechHHHHHHHHHcCHHHHHHHHHHHHCCCEEEeCCeeecccccCCCHHHHHHHHHHHHHHHHHHcC--CCCceEEee
Confidence            899999999999999999999999999999999999999999999999999999999999999999999  889999999


Q ss_pred             CCCCCCHHHHHHHHHCCCCceeeecccHHHHHHhhhCCcceEEEecCCCCCCCcceeeeecCC-CCCCCCCCCcc-----
Q psy10965         81 DPFGHSAEVALEFADMGFDGVFFGRIDHEDIALRKKNKTMEMVWRPDDTLGPEGDFFTGVMYN-IYDPPPGFCFD-----  154 (400)
Q Consensus        81 D~FGhs~~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~~~~~F~W~g~dg~~~~s~v~t~~~~~-~Y~~~~~~~~d-----  154 (400)
                      ||||||++||+||+++||++++++|+++++++.++..+.++|+|++......+++||||+++. +|+.|...+.|     
T Consensus       174 D~FGhs~~lp~il~~~Gi~~~~~~R~~~~~~~~~~~~k~lef~w~~~W~~~~~s~ilth~~~~~~Y~~p~~~~~d~~~~~  253 (381)
T d3bvua3         174 APFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCC  253 (381)
T ss_dssp             SSSSBCTHHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHG
T ss_pred             CCCCccHHHHHHHHhcCCCeEEEEecchhhhcccccccccceeecccccCCCCCceeEecccccccCCcccCCCCccccc
Confidence            999999999999999999999999999999999999999999988764433349999999986 45554332221     


Q ss_pred             ---C------CCCCCCccCCCCccccchhhhHHHHHHHHHHHhhhcCCCceEEeeeCCCCCcchhHH---HHHHHHHHHH
Q psy10965        155 ---T------YCEDEPIMDNPKLHGVNVNARVDEFIEVVKKYAQAYRTNNVIITMGGDFHYVVASAW---FKNIDKLIKY  222 (400)
Q Consensus       155 ---~------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~il~~~G~D~~~~~a~~~---f~~~~~li~~  222 (400)
                         .      .+..+...++..++++|++++++.|++++++++..|+|++||+|+|+||+|+++..|   |+||+++|++
T Consensus       254 ~f~f~~~~~~~~~~p~~~~~~~i~~~nv~~r~~~~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w~~~~~n~~kli~~  333 (381)
T d3bvua3         254 QFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEH  333 (381)
T ss_dssp             GGCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCCcccCCcccchhHHHHHHHHHHHHHHHHhhccCCCeEEEccccCCCCCccchHHHHHHhHHHHHHH
Confidence               1      112222233445788999999999999999999999999999999999999999877   9999999999


Q ss_pred             HHccCCCCeEEEecChHHHHHHHHhc----CCCCCCccCCCcccCCCC
Q psy10965        223 VNAKLNSDVHVLYSTPACYLQALNKE----NITWPSKMDDDFFPFGSD  266 (400)
Q Consensus       223 ~n~~~~~~~~i~~sT~~~yf~~l~~~----~~~lpv~~~gel~~~~~~  266 (400)
                      +|+++..+++++||||++||++|++.    +.++|++ +||||||+++
T Consensus       334 iN~~~~~~v~i~~ST~~~Yf~al~~~~~~~~~~~P~~-~gDFfpYad~  380 (381)
T d3bvua3         334 INSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTL-SGDFFTYADR  380 (381)
T ss_dssp             HHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEE-ESCBCSCBSS
T ss_pred             HHhCCCCCeEEEECCHHHHHHHHHHHHhhcCCCCCCc-CCCCcCCCCC
Confidence            99976567899999999999999864    5689999 9999999874
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2iw0a1 c.6.2.3 (A:29-248) Chitin deacetylase {Bean anthracnose fungus (Colletotrichum lindemuthianum) [TaxId: 290576]} Back     information, alignment and structure