Psyllid ID: psy1099

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-----
Protein Sequence
MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYT
Secondary Structure (PSIPRED)
cccccHHHHHHHcccEEEcccccccHHHHHHHHHHHHHccccccEEEcccccccHHHHHHcccccEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccccEEcccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHcccccccEEEEcHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccEEEccEEEcccccccEEEEEcccccEEEEccccccHHHHHHHccccccEEEEcccccHHHHHHHHHHHHcHHHHHHHHcccccccccccEEcccccHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHcccccEEEEcccccccEEcccccHHHHHHccccccccEEEEEcccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccEEEccccccccccccEEEEccccccEEEccccccHHHHHHHHcccccccccccccccHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHHcccEEEEccccccc
Secondary Structure Prediction (SSPRO)
HHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHccccccEEEccEcccHHHHHHccccccEEEEccEEEEEHHHHHHHHHHHHHHcccccEcccccccccEcccccHHHHHHHHHHHHHHHHcccEEcccccEEcccccEEccEEEEccccccHHHHccccccEEEEEEEccHHHHHHHHHccccccEEEEEccEHHHHHHHHHHccccEEEEccccccHHHHHHHHHcccEEcccccEEcccccEEccEEEEccccccHHHHccccccEEEEEEEccHHHHHHHHHccccccEEEEEccEHHHHHHHHHHccccEEEEcccccccccccEcccHHHEEccEcHHHHHHccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEEcccccEEEEcccccHHHHHcccEcccccEEEEEHHHHHHHHHHHHHHHHcccEcccccccccEcccccHHHHHHHHHHHHHHHHcccEEEEcccEcccccccEccEEEEccccccHHHHccccccEEEEEEEccHHHHHHHHHccccccEEEEEccEHHHHHHHHHHccccEEEEccccEcccHHHEEccEccHHHHHHHEEEEEEEEEcccccc
Coil and Loop (DISEMBL)
mlawkwgpalaagcpvllkpaeqtplTALYVAALtqqagfpdgvisvlpgygpmsapywrksclsplayrsrtyvQEDIYDTFVKKAVEKAAArkvgdpfdksvqqgpqvDAVMFTKVLNYIKSGVeqggkleaggkrkgdkgyfieptvfsnvtddfKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVeqggkleaggkrkgdkgyfieptvfsnvtddfKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAvvpqapfggfkesgiGRELGKAALDEYTelktvtesplrsytsHSIMAAAAASNLKRVSLelggksplvicadadvDMAYYYCFVCagsrtyvqeDIYDTFVKKAVEKAAArkvgdpfdksvqqgpqvDAEMFTKVLNYIKSGVeqggkleaggkrkgdkgyfieptvfsnvtddfKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAInagsavvpqapfggfkesgiGRELGKAALDEYTelktvtesplrsyt
Flexible Loop (DISEMBL)
MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAarkvgdpfdksvqqgpqVDAVMFTKVLNYIKSgveqggkleaggkrkgdkgyfieptvfsnvtdDFKIAREeifgpvqtiikFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGveqggkleaggkrkgdkgyfieptvfsnvtdDFKIAREeifgpvqtiikFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKtvtesplrsyTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYDTFVKKAVEKAAarkvgdpfdksvqqgpqvDAEMFTKVLNYIKSgveqggkleaggkrkgdkgyfieptvfsnvtdDFKIAREeifgpvqtiikFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELGKAALdeytelktvtesplrsyt
Low Complexity Region (SEG)
MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYDTFvkkavekaaarkvGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYDTFvkkavekaaarkvGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYT
Disordered region (IsUnstruct)
**AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG**********PQVDAVMFTKVLNYIKSGVEQGG*********GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKL*******GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTE**LRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYDTFVKKAVEKAAA*****************DAEMFTKVLNYIKSGVE************GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELGKAAL******************
Disordered Region (DISOPRED)
MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRS**
Disordered Region (DISEMBL)
MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELK***********
Disordered Region (DISPRO)
MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPL****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	605	2.2.26 [Sep-21-2011]
Q66HF8	519	Aldehyde dehydrogenase X,	yes	N/A	0.371	0.433	0.549	4e-70
P27463	509	Retinal dehydrogenase 1 O	no	N/A	0.368	0.438	0.579	2e-69
Q8S528	534	Aldehyde dehydrogenase fa	yes	N/A	0.371	0.421	0.537	9e-69
P30837	517	Aldehyde dehydrogenase X,	yes	N/A	0.371	0.435	0.537	2e-68
Q5R6B5	517	Aldehyde dehydrogenase X,	yes	N/A	0.371	0.435	0.541	2e-68
P11884	519	Aldehyde dehydrogenase, m	no	N/A	0.371	0.433	0.533	1e-67
P47738	519	Aldehyde dehydrogenase, m	yes	N/A	0.371	0.433	0.533	1e-67
P81178	500	Aldehyde dehydrogenase, m	N/A	N/A	0.371	0.45	0.533	2e-67
O93344	518	Retinal dehydrogenase 2 O	no	N/A	0.368	0.430	0.545	2e-67
P30841	496	Omega-crystallin OS=Enter	N/A	N/A	0.366	0.447	0.537	2e-67

>sp|Q66HF8|AL1B1_RAT Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1

 Score =  266 bits (680), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 133/242 (54%), Positives = 169/242 (69%), Gaps = 17/242 (7%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF----------VCAGSRTYV 422
           H I  AA  SNLKRV+LELGGKSP ++ ADAD+D A   C            CAGSRT+V
Sbjct: 270 HLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALFFNMGQCCCAGSRTFV 329

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           +E IY  F+++ VEKA  RKVG+PF+   QQGPQVD E F K+L YI+ G ++G KL  G
Sbjct: 330 EESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILGYIRLGQKEGAKLLCG 389

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G+R G++G+FI+PTVF NV DD +IAREEIFGPVQ + KFK ++EVI+RAN+T+YGLA+ 
Sbjct: 390 GERFGERGFFIKPTVFGNVQDDMRIAREEIFGPVQPLFKFKKIEEVIQRANNTRYGLAAA 449

Query: 543 IVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T ++D A  F+ A+ AG+        V    PFGGFKESG GRELG+  L  YTE+KT
Sbjct: 450 VFTRDLDKALYFSQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKT 509

Query: 596 VT 597
           VT
Sbjct: 510 VT 511

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation.
Rattus norvegicus (taxid: 10116)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1

 Score =  264 bits (674), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/240 (57%), Positives = 173/240 (72%), Gaps = 17/240 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYYCFVC--AGSRTYVQE 424
           I  AA  +NLKRV+LELGGKSP +I ADAD+D A        +Y+   C  AGSR +V+E
Sbjct: 262 IKEAAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEE 321

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD FV++++E+A    +GDP    VQQGPQ+D E F K+L+ I+SG ++G KLE GG 
Sbjct: 322 PIYDEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGG 381

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
             G+KGYFI+PTVFSNVTDD +IA+EEIFGPVQ I+KFKT+DEVI+RAN+T YGLA+ + 
Sbjct: 382 PWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVF 441

Query: 545 TTNIDTANTFAHAINAG-------SAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T +ID A TFA A+ AG       SA   Q PFGGFK SG GRELG+  L EYTE+KTVT
Sbjct: 442 TKDIDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVT 501

Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2

 Score =  261 bits (668), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 130/242 (53%), Positives = 167/242 (69%), Gaps = 17/242 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           I+  A+ SNLK V+LELGGKSP ++C DADVD    +A++  F       CAGSRT+V E
Sbjct: 286 ILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHE 345

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            +YD FV+KA  +A  R VGDPF   ++QGPQVD+E F K+L YIK GVE G  L+AGG 
Sbjct: 346 RVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGD 405

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
           R G KGY+I+PTVFS+V DD  IA +EIFGPVQTI+KFK LDEVI RAN+++YGLA+G+ 
Sbjct: 406 RLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVF 465

Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T N+DTA+    A+  G+  +          PFGG+K SGIGRE G  +L+ Y ++K V 
Sbjct: 466 TQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVV 525

Query: 598 ES 599
            S
Sbjct: 526 TS 527

Possesses activity on acetaldehyde and glycolaldehyde in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P30837|AL1B1_HUMAN Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=3

 Score =  261 bits (666), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/242 (53%), Positives = 168/242 (69%), Gaps = 17/242 (7%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF----------VCAGSRTYV 422
           H I  AA  SNLKRV+LELGGKSP ++ ADAD++ A   C            CAGSRT+V
Sbjct: 268 HLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFV 327

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           +E IY+ F+++ VEKA  RKVG+PF+   QQGPQVD E F +VL YI+ G ++G KL  G
Sbjct: 328 EESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCG 387

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G+R G++G+FI+PTVF  V DD +IA+EEIFGPVQ + KFK ++EV+ERAN+T+YGLA+ 
Sbjct: 388 GERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKIEEVVERANNTRYGLAAA 447

Query: 543 IVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T ++D A  F  A+ AG+        V    PFGGFKESG GRELG+  L  YTE+KT
Sbjct: 448 VFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKT 507

Query: 596 VT 597
           VT
Sbjct: 508 VT 509

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q5R6B5|AL1B1_PONAB Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1

 Score =  260 bits (665), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/242 (54%), Positives = 167/242 (69%), Gaps = 17/242 (7%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF----------VCAGSRTYV 422
           H I  AA  SNLKRV+LELGGKSP ++ ADAD++ A   C            CAGSRT+V
Sbjct: 268 HLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFV 327

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           +E IY+ F+++ VEKA  RKVG+PF+   QQGPQVD E F +VL YI+ G ++G KL  G
Sbjct: 328 EESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCG 387

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G+R G++G+FI+PTVF  V DD +IA+EEIFGPVQ + KFK ++EVIERAN T+YGLA+ 
Sbjct: 388 GERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKMEEVIERANTTRYGLAAA 447

Query: 543 IVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T ++D A  F  A+ AG+        V    PFGGFKESG GRELG+  L  YTE+KT
Sbjct: 448 VFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKT 507

Query: 596 VT 597
           VT
Sbjct: 508 VT 509

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1

 Score =  258 bits (658), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 129/242 (53%), Positives = 170/242 (70%), Gaps = 17/242 (7%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYV 422
           H I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+V
Sbjct: 270 HLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFV 329

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           QED+YD FV+++V +A +R VG+PFD   +QGPQVD   F K+L YIKSG ++G KL  G
Sbjct: 330 QEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCG 389

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G    D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++KYGLA+ 
Sbjct: 390 GGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAA 449

Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T ++D AN  + A+ AG+  +        Q+PFGG+K SG GRELG+  L  YTE+KT
Sbjct: 450 VFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 509

Query: 596 VT 597
           VT
Sbjct: 510 VT 511

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1

 Score =  258 bits (658), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 129/242 (53%), Positives = 170/242 (70%), Gaps = 17/242 (7%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYV 422
           H I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+V
Sbjct: 270 HLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFV 329

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           QE++YD FV+++V +A +R VG+PFD   +QGPQVD   F K+L YIKSG ++G KL  G
Sbjct: 330 QENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCG 389

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G    D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAND+KYGLA+ 
Sbjct: 390 GGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAA 449

Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T ++D AN  + A+ AG+  +        Q+PFGG+K SG GRELG+  L  YTE+KT
Sbjct: 450 VFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 509

Query: 596 VT 597
           VT
Sbjct: 510 VT 511

Is capable of converting retinaldehyde to retinoic acid.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1

 Score =  257 bits (657), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 129/242 (53%), Positives = 170/242 (70%), Gaps = 17/242 (7%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYV 422
           H I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+V
Sbjct: 251 HLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFV 310

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           QED+YD FV+++V +A +R VG+PFD   +QGPQVD   F K+L YIKSG ++G KL  G
Sbjct: 311 QEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCG 370

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G    D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++KYGLA+ 
Sbjct: 371 GGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAA 430

Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T ++D AN  + A+ AG+  +        Q+PFGG+K SG GRELG+  L  YTE+KT
Sbjct: 431 VFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 490

Query: 596 VT 597
           VT
Sbjct: 491 VT 492

Mesocricetus auratus (taxid: 10036)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|O93344|AL1A2_CHICK Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2

 Score =  257 bits (657), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 131/240 (54%), Positives = 174/240 (72%), Gaps = 17/240 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYYCFVC--AGSRTYVQE 424
           I  AA  SNLKRV+LELGGKSP +I ADAD+D A        ++    C  AGSR YV+E
Sbjct: 271 IQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEE 330

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IY+ FV+++VE+A  R VG PFD + +QGPQ+D + + K+L  I+SG+ +G KLE GGK
Sbjct: 331 SIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGK 390

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
             G KG+FIEPTVFSNVTDD +IA+EEIFGPVQ I++FKT+DEVIERAN++ +GL + + 
Sbjct: 391 GLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTVDEVIERANNSDFGLVAAVF 450

Query: 545 TTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T +I+ A T + A+ AG+       A+  Q+PFGGFK SG GRE+G++ L EY+E+KTVT
Sbjct: 451 TNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGESGLREYSEVKTVT 510

Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|P30841|CROM_ENTDO Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3

 Score =  257 bits (657), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 129/240 (53%), Positives = 168/240 (70%), Gaps = 18/240 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCA----------GSRTYVQE 424
           +M AA +SNLKR SLEL GK P+V+  D D+D A       A          GSR YV E
Sbjct: 248 VMQAAGSSNLKRCSLELSGKCPVVVFPDTDLDFAVQQAHEAAFQNMGQCRWSGSRAYVHE 307

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IY+ FVK++VE+A  RK+GDP++   + GPQ+D E +TKVL+YIKS  EQG KL+ GG 
Sbjct: 308 SIYEEFVKRSVEQATRRKIGDPYELDTEHGPQIDEEQYTKVLDYIKSAQEQGAKLKYGGN 367

Query: 485 RKGDK-GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           + GDK GY+IEPTVFS V+D+ KIA+EEIFGPVQ ++KF+ LD+VI+R N++ YG+A+ I
Sbjct: 368 KHGDKGGYYIEPTVFSEVSDNMKIAKEEIFGPVQLLMKFRDLDDVIDRCNNSDYGMAAAI 427

Query: 544 VTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            T +I+   TF +A+N G+  V       PQAPFGGFK SGI RE+GK AL EYTE+K+V
Sbjct: 428 FTNDINRIMTFTNAVNTGTIWVNTFHHWFPQAPFGGFKTSGISREMGKYALREYTEVKSV 487

Omega-crystallins are structural components of squids and octopi eye lens. Contain relatively little if any DHAL activity.

Enteroctopus dofleini (taxid: 267067)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	605
322799549	482	hypothetical protein SINV_15120 [Solenop	0.406	0.510	0.590	3e-78
328778476	489	PREDICTED: retinal dehydrogenase 1-like	0.406	0.503	0.579	5e-77
110611282	492	1-pyrroline-5-carboxylate dehydrogenase	0.368	0.453	0.608	2e-76
307178537	488	Retinal dehydrogenase 1 [Camponotus flor	0.406	0.504	0.571	4e-76
380014398	489	PREDICTED: retinal dehydrogenase 1-like	0.406	0.503	0.568	6e-76
350425487	494	PREDICTED: aldehyde dehydrogenase X, mit	0.371	0.455	0.619	2e-75
380014400	451	PREDICTED: retinal dehydrogenase 1-like	0.371	0.498	0.599	2e-75
242010164	491	restnal dehydrogenase, putative [Pedicul	0.523	0.645	0.445	3e-75
91091542	489	PREDICTED: similar to aldehyde dehydroge	0.368	0.456	0.612	7e-75
195445664	486	GK12053 [Drosophila willistoni] gi|19416	0.368	0.458	0.625	8e-75

>gi|322799549|gb|EFZ20857.1| hypothetical protein SINV_15120 [Solenopsis invicta]

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 156/264 (59%), Positives = 189/264 (71%), Gaps = 18/264 (6%)

Query: 351 AALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADV----D 406
           AA+ E+ E++ V  +   +   HSIM AA  SNLKRVSLELGGKSPLV+  DADV    +
Sbjct: 213 AAIAEHPEIQKVAFTG-STEVGHSIMVAAGKSNLKRVSLELGGKSPLVVFDDADVKEAAE 271

Query: 407 MAYYYCF------VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAE 460
           +A+   F       CAGSRT+V   IYD FVK A + A  RKVGDPFD ++ QGPQ+D E
Sbjct: 272 IAHNAIFSNHGQNCCAGSRTFVHSKIYDDFVKHAKQLALNRKVGDPFDSNMNQGPQIDQE 331

Query: 461 MFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 520
           M  KV+N I SG +QG  +E GG RKGD GYF+EPTVFSNVTDD +IA+EEIFGPVQTI+
Sbjct: 332 MLDKVMNLINSGKQQGAVVETGGTRKGDIGYFVEPTVFSNVTDDMRIAKEEIFGPVQTIL 391

Query: 521 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGF 573
           KF T++EVIERAN T YGLASGI+T +I+ A  FA A+ AGS       A+ PQ PFGGF
Sbjct: 392 KFDTMNEVIERANRTNYGLASGIITKDINKAMEFAQAVEAGSVWVNCYDAITPQTPFGGF 451

Query: 574 KESGIGRELGKAALDEYTELKTVT 597
           K+SGIGRELG+  L EY E+KTV+
Sbjct: 452 KQSGIGRELGEEGLKEYLEIKTVS 475

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778476|ref|XP_392104.4| PREDICTED: retinal dehydrogenase 1-like isoform 1 [Apis mellifera]

 Score =  295 bits (755), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 185/264 (70%), Gaps = 18/264 (6%)

Query: 351 AALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYY 410
           AA+ E+ E+  +  +   +   H IMAA+A SNLKRVSLELGGKSPLVI  D D+  A  
Sbjct: 221 AAIAEHPEINKIAFTG-STEVGHLIMAASAKSNLKRVSLELGGKSPLVIFDDVDIKEAAE 279

Query: 411 YCF----------VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAE 460
             F           CAGSRT+V   IYD FV  A + A+ RKVGDPF+   QQGPQ+D E
Sbjct: 280 IAFNAIFANHGQNCCAGSRTFVHAKIYDQFVNHAKQLASQRKVGDPFNSETQQGPQIDEE 339

Query: 461 MFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 520
           MF KVL+ IKSG E+G  LE GG+R G+ GYFI+PTVFSNVTD  +IA+EEIFGPVQ+I+
Sbjct: 340 MFHKVLSLIKSGQEEGAVLETGGERHGNVGYFIKPTVFSNVTDTMRIAKEEIFGPVQSIL 399

Query: 521 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGF 573
           KF+T+DEVIERAN+T YGLA+G+VT NID A  FA A+ AGS       A+ PQ PFGGF
Sbjct: 400 KFETMDEVIERANNTNYGLAAGVVTKNIDKALIFAQAVEAGSVWINCYDAITPQTPFGGF 459

Query: 574 KESGIGRELGKAALDEYTELKTVT 597
           K+SGIGRELG   L EY E KT++
Sbjct: 460 KQSGIGRELGAEGLKEYLETKTIS 483

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110611282|gb|ABG77990.1| 1-pyrroline-5-carboxylate dehydrogenase 1 [Glossina morsitans morsitans] gi|289740517|gb|ADD19006.1| aldehyde dehydrogenase [Glossina morsitans morsitans]

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 146/240 (60%), Positives = 180/240 (75%), Gaps = 17/240 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF----------VCAGSRTYVQE 424
           +M AAA SNLKRVSLELGGKSPLVI  DADVD A                CAGSRTYV E
Sbjct: 244 VMEAAAKSNLKRVSLELGGKSPLVIFDDADVDFAVNVAHEALFSNHGQSCCAGSRTYVHE 303

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD FV KAV KA +R VGDPFD  V QGPQ+D +MFT+VL+YI SG E+G KL+ GGK
Sbjct: 304 KIYDEFVSKAVAKAKSRTVGDPFDDKVLQGPQIDNDMFTQVLSYIDSGKEEGAKLQCGGK 363

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
           R G+KG+FIEPTVFS+VTD+ +IA+EEIFGPVQ+I KF T++E+IERAN+ KYGLA+G++
Sbjct: 364 RVGEKGFFIEPTVFSDVTDNMRIAQEEIFGPVQSIFKFSTVEEIIERANNVKYGLAAGVI 423

Query: 545 TTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T +++ A  +A +++AGS       AV+PQ PFGG+K SG+GRELGK  L+ Y E KT+T
Sbjct: 424 TNDLNKAMQYAQSVDAGSVWINCYDAVLPQTPFGGYKNSGMGRELGKDGLENYLETKTIT 483

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178537|gb|EFN67226.1| Retinal dehydrogenase 1 [Camponotus floridanus]

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 151/264 (57%), Positives = 190/264 (71%), Gaps = 18/264 (6%)

Query: 351 AALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADV----D 406
           AA+ E++E+  V  +   +   H+IMAAAA SNLKRVSLELGGKSPLVI  D DV    +
Sbjct: 219 AAIAEHSEIHKVAFTG-STEVGHAIMAAAAKSNLKRVSLELGGKSPLVIFDDVDVKEAAE 277

Query: 407 MAYYYCFV------CAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAE 460
           +A+   FV      CAGSRT+V   IYD FVK A + A A+KVGDPFD  + QGPQ+D E
Sbjct: 278 IAHDAIFVNHGQCCCAGSRTFVHSKIYDEFVKHAKQLALAKKVGDPFDSKIDQGPQIDQE 337

Query: 461 MFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 520
              K+++ I SG +QG  +E GG R G+ GYF++PT+FSNVTDD +IA+EEIFGPVQTI+
Sbjct: 338 QLNKIMDLINSGKQQGAVVEVGGNRIGETGYFVQPTIFSNVTDDMRIAKEEIFGPVQTIL 397

Query: 521 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGF 573
           KF T+DEVIERAN T YGLASGI+T +I+ A  FA AI +GS       A+  QAPFGGF
Sbjct: 398 KFDTMDEVIERANRTNYGLASGIITKDINKALEFAQAIESGSVWVNCYDAITSQAPFGGF 457

Query: 574 KESGIGRELGKAALDEYTELKTVT 597
           K+SGIGRELG+  L+EY E+KT++
Sbjct: 458 KQSGIGRELGEEGLNEYLEIKTIS 481

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014398|ref|XP_003691219.1| PREDICTED: retinal dehydrogenase 1-like isoform 1 [Apis florea]

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 150/264 (56%), Positives = 186/264 (70%), Gaps = 18/264 (6%)

Query: 351 AALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYY 410
           AA+ E+ E+  +  +   S   H IMAA+A SNLKR+SLELGGKSPLVI  D D+  A  
Sbjct: 221 AAIAEHPEINKIAFTG-SSEVGHLIMAASAKSNLKRISLELGGKSPLVIFDDVDIKEAAE 279

Query: 411 YCF----------VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAE 460
             F           CAGSRT+V   IYD FV  A + A+ RK+GDPF+   QQGPQ+D +
Sbjct: 280 IAFNAIFANHGQNCCAGSRTFVHAKIYDQFVSYAKQLASQRKIGDPFNSETQQGPQIDEK 339

Query: 461 MFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 520
           MF KVL+ IKSG E+G  LE GG+R G+ GYFI+PTVFSNVTD  +IA+EEIFGPVQ+I+
Sbjct: 340 MFDKVLDLIKSGKEEGAVLETGGERHGNVGYFIKPTVFSNVTDTMRIAKEEIFGPVQSIL 399

Query: 521 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGF 573
           KF+T+DEVIERAN+T YGLA+G++T NID A TFA A+ AGS       ++ PQ PFGGF
Sbjct: 400 KFETMDEVIERANNTNYGLAAGVLTKNIDKALTFAQAVEAGSVWINCYDSITPQTPFGGF 459

Query: 574 KESGIGRELGKAALDEYTELKTVT 597
           K+SGIGRELG   L EY E KT++
Sbjct: 460 KQSGIGRELGAEGLKEYLETKTIS 483

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350425487|ref|XP_003494137.1| PREDICTED: aldehyde dehydrogenase X, mitochondrial-like [Bombus impatiens]

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 150/242 (61%), Positives = 177/242 (73%), Gaps = 17/242 (7%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYV 422
           H IMAA+A SNLKRVSLELGGKSPLVI  D D++    +AY   F       CAGSRT+V
Sbjct: 241 HLIMAASAKSNLKRVSLELGGKSPLVIFDDVDIEKAAEIAYNAIFANHGQNCCAGSRTFV 300

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
              IYD FV  A + A   KVGDPFD   QQGPQVD EMF KVL  IKSG E+G  LE G
Sbjct: 301 HTKIYDQFVACAKQLALKTKVGDPFDAETQQGPQVDREMFDKVLGLIKSGKEEGAVLEVG 360

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G+R G+ GYFI+PTVFSNVTDD +IA+EEIFGPVQ+I+KF+T+DEVIERAN+T YGLA+G
Sbjct: 361 GERHGNVGYFIKPTVFSNVTDDMRIAKEEIFGPVQSILKFETMDEVIERANNTNYGLAAG 420

Query: 543 IVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
           +++ +ID A TFA A+ AGS       A+ PQ PFGGFK+SGIGRELG   L EY E KT
Sbjct: 421 VLSKDIDKALTFAQAVQAGSVWVNCYDAITPQTPFGGFKQSGIGRELGAEGLKEYLETKT 480

Query: 596 VT 597
           ++
Sbjct: 481 IS 482

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014400|ref|XP_003691220.1| PREDICTED: retinal dehydrogenase 1-like isoform 2 [Apis florea]

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 145/242 (59%), Positives = 176/242 (72%), Gaps = 17/242 (7%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF----------VCAGSRTYV 422
           H IMAA+A SNLKR+SLELGGKSPLVI  D D+  A    F           CAGSRT+V
Sbjct: 204 HLIMAASAKSNLKRISLELGGKSPLVIFDDVDIKEAAEIAFNAIFANHGQNCCAGSRTFV 263

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
              IYD FV  A + A+ RK+GDPF+   QQGPQ+D +MF KVL+ IKSG E+G  LE G
Sbjct: 264 HAKIYDQFVSYAKQLASQRKIGDPFNSETQQGPQIDEKMFDKVLDLIKSGKEEGAVLETG 323

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G+R G+ GYFI+PTVFSNVTD  +IA+EEIFGPVQ+I+KF+T+DEVIERAN+T YGLA+G
Sbjct: 324 GERHGNVGYFIKPTVFSNVTDTMRIAKEEIFGPVQSILKFETMDEVIERANNTNYGLAAG 383

Query: 543 IVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
           ++T NID A TFA A+ AGS       ++ PQ PFGGFK+SGIGRELG   L EY E KT
Sbjct: 384 VLTKNIDKALTFAQAVEAGSVWINCYDSITPQTPFGGFKQSGIGRELGAEGLKEYLETKT 443

Query: 596 VT 597
           ++
Sbjct: 444 IS 445

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242010164|ref|XP_002425846.1| restnal dehydrogenase, putative [Pediculus humanus corporis] gi|212509779|gb|EEB13108.1| restnal dehydrogenase, putative [Pediculus humanus corporis]

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 163/366 (44%), Positives = 218/366 (59%), Gaps = 49/366 (13%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMS-APYW 59
           ML WKWGPALA GC +++KPAEQTPLTALY+A+L ++AGFP GVI+V+PGYGP + A   
Sbjct: 165 MLIWKWGPALACGCTIVMKPAEQTPLTALYMASLAKEAGFPPGVINVVPGYGPTAGAALV 224

Query: 60  RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVL 119
               ++ +A+   T V E I        +++ +    G          P +D     + +
Sbjct: 225 NHPDVNKIAFTGSTEVGEIIMKGCAASNLKRVSLELGGKSPLVVFSDAPDLD-----EAV 279

Query: 120 NYIKSGV-EQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 178
           N    G+    G+    G R      F++ T++                           
Sbjct: 280 NIAHEGLFSNHGQSCCAGSRT-----FVQDTIY--------------------------- 307

Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG-SVDAEMFTKVLNYIKSGVEQGGK 237
           D  +E+A      LAS  V       + F   +  G  +D EMF KV+N I+SG ++G K
Sbjct: 308 DAFVEKATQ----LASNRVV-----GDPFKKGVQQGPQIDKEMFDKVMNLIESGKKEGAK 358

Query: 238 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 297
           +E GGKR G+ GYF+EPTVFSNVTD+ +IA+EEIFGPVQ IIKFKTL+EVIERAN+T YG
Sbjct: 359 VECGGKRLGNVGYFVEPTVFSNVTDNMRIAKEEIFGPVQQIIKFKTLEEVIERANNTTYG 418

Query: 298 LASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYT 357
           LASGI+T++I+ A TFA ++ AGSVWINCY A+  Q PFGGFK SG GR+LG+ +L EY 
Sbjct: 419 LASGIITSDINKAMTFAQSVQAGSVWINCYDAITSQTPFGGFKNSGFGRDLGEESLKEYL 478

Query: 358 ELKTVT 363
           E KT+T
Sbjct: 479 ETKTIT 484

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91091542|ref|XP_970835.1| PREDICTED: similar to aldehyde dehydrogenase [Tribolium castaneum] gi|270000922|gb|EEZ97369.1| hypothetical protein TcasGA2_TC011192 [Tribolium castaneum]

 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 147/240 (61%), Positives = 177/240 (73%), Gaps = 17/240 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           IM  +A SNLKRVSLELGGKSPLV+  DAD+D    +A+   F       CAGSRT+VQ 
Sbjct: 243 IMEYSAQSNLKRVSLELGGKSPLVVFNDADLDEAVEIAHNAIFGNHGQNCCAGSRTFVQS 302

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD FV+KAV+KA  RKVGDPFD +VQQGPQ+D     K+L  I SG ++G KLE GG 
Sbjct: 303 GIYDAFVQKAVQKAKLRKVGDPFDPNVQQGPQIDKPSLDKILRLIDSGKKEGAKLEIGGS 362

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
           R G +GYF+EPTVFSNVTD   IA+EEIFGPVQ+I+KF+TL+EVIERANDT YGLA+G++
Sbjct: 363 RIGTEGYFVEPTVFSNVTDAMSIAKEEIFGPVQSILKFETLEEVIERANDTYYGLAAGVI 422

Query: 545 TTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T NIDTA TFA A+ AGS        + PQ PFGG+K SGIGRE+G  +LD Y E KT++
Sbjct: 423 TKNIDTALTFAQAVQAGSVWVNCYDYITPQTPFGGYKMSGIGREMGAESLDAYVETKTIS 482

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195445664|ref|XP_002070429.1| GK12053 [Drosophila willistoni] gi|194166514|gb|EDW81415.1| GK12053 [Drosophila willistoni]

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 150/240 (62%), Positives = 184/240 (76%), Gaps = 17/240 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCF------VCAGSRTYVQE 424
           +M AAA SNLKRVSLELGGKSP+V+  DAD+D A    +   F       CAGSRTYV E
Sbjct: 243 VMEAAAKSNLKRVSLELGGKSPVVVFDDADIDYAVETTHEALFSNHGQSCCAGSRTYVHE 302

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD FV+KA  KA ARKVG+PF++++QQGPQ+D EM  KVL YI+SG +QG KL+AGGK
Sbjct: 303 KIYDKFVEKAAAKAKARKVGNPFEENIQQGPQIDDEMLNKVLGYIESGKQQGAKLQAGGK 362

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
           R G+ GYFIEPTVFS+V DD KIA+EEIFGPVQ+I KF TLDE+I+RAN+ +YGLA+GI+
Sbjct: 363 RIGNVGYFIEPTVFSDVKDDMKIAQEEIFGPVQSIFKFSTLDEMIDRANNVQYGLAAGII 422

Query: 545 TTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T +I+ A  FA++++AGS       AV+PQ PFGG+K SGIGRELGK  LD Y E KT+T
Sbjct: 423 TNDINKAMKFANSVDAGSVWINCYDAVLPQTPFGGYKHSGIGRELGKDGLDNYLETKTIT 482

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	605
FB|FBgn0051075	485	CG31075 [Drosophila melanogast	0.419	0.523	0.512	2.1e-86
ZFIN|ZDB-GENE-040426-1262	516	aldh2.1 "aldehyde dehydrogenas	0.418	0.490	0.511	1.4e-78
UNIPROTKB|F1NJC7	507	ALDH1A1 "Retinal dehydrogenase	0.418	0.499	0.522	2.8e-78
UNIPROTKB|F1NJP8	445	ALDH1A1 "Retinal dehydrogenase	0.418	0.568	0.522	2.8e-78
UNIPROTKB|P27463	509	ALDH1A1 "Retinal dehydrogenase	0.418	0.497	0.522	2.8e-78
UNIPROTKB|E1BT93	519	ALDH2 "Uncharacterized protein	0.418	0.487	0.492	7.5e-78
RGD|69219	519	Aldh2 "aldehyde dehydrogenase	0.418	0.487	0.477	2e-77
ZFIN|ZDB-GENE-030326-5	516	aldh2.2 "aldehyde dehydrogenas	0.416	0.488	0.483	3.2e-77
MGI|MGI:99600	519	Aldh2 "aldehyde dehydrogenase	0.416	0.485	0.483	4.1e-77
UNIPROTKB|E2RMX7	496	ALDH1A1 "Uncharacterized prote	0.418	0.510	0.488	4.1e-77

FB|FBgn0051075 CG31075 [Drosophila melanogaster (taxid:7227)]

 Score = 663 (238.4 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
 Identities = 140/273 (51%), Positives = 185/273 (67%)

Query:   342 SGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA 401
             +G G   G AA+  + ++  V  +         +M AAA SNLKRVSLELGGKSP+V+  
Sbjct:   211 NGFGPTAG-AAISAHPDIAKVAFTGSVEI-GRIVMQAAATSNLKRVSLELGGKSPVVVFD 268

Query:   402 DADVDMA----YYYCF------VCAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSV 451
             DAD+D A    +   F       CAGSRTYV E IYD F             G+PF+++V
Sbjct:   269 DADIDFAVETTHEALFSNHGQSCCAGSRTYVHEKIYDEFVAKAAAKAKARKVGNPFEQNV 328

Query:   452 QQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 511
             QQGPQ+D +M TKVL YI+SG ++G KL+AGGKR G+ G+F+EPTVFS+V DD +IA+EE
Sbjct:   329 QQGPQIDDDMLTKVLGYIESGKKEGAKLQAGGKRIGNVGFFVEPTVFSDVKDDMRIAQEE 388

Query:   512 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-------AV 564
             IFGPVQ+I KF +L+E+I+RAN+ +YGLA+G++T +I+ A  FA+ ++AGS       AV
Sbjct:   389 IFGPVQSIFKFSSLEEMIDRANNVQYGLAAGVITNDINKALKFANNVDAGSVWINCYDAV 448

Query:   565 VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
             +P  PFGG+K SGIGRELGK  LD Y E KT+T
Sbjct:   449 LPSTPFGGYKHSGIGRELGKDGLDNYLETKTIT 481

GO:0005739 "mitochondrion" evidence=ISS

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0006090 "pyruvate metabolic process" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

ZFIN|ZDB-GENE-040426-1262 aldh2.1 "aldehyde dehydrogenase 2.1" [Danio rerio (taxid:7955)]

 Score = 636 (228.9 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
 Identities = 139/272 (51%), Positives = 174/272 (63%)

Query:   343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
             G G   G AA+  + ++  V  +       H I  A++ASNLK VSLELGGKSP +I +D
Sbjct:   239 GFGPTAG-AAIASHMDVDKVAFTGSTD-VGHLIQQASSASNLKNVSLELGGKSPNIILSD 296

Query:   403 AD----VDMAYYYCFV------CAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQ 452
             A+    V+ A+   F       CAG+RT+VQE IYD F             GDPFD + +
Sbjct:   297 ANMEEAVEQAHSALFFNQGQCCCAGTRTFVQESIYDEFVERSVERAKNRIVGDPFDLNTE 356

Query:   453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 512
             QGPQVD + F KVL YI SG  +G KL  GG    ++GYFI+PTVF +V DD KIAREEI
Sbjct:   357 QGPQVDEDQFKKVLGYISSGKREGAKLMCGGAPAAERGYFIQPTVFGDVKDDMKIAREEI 416

Query:   513 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP------ 566
             FGPV  I+KFK+L+EVIERAND+KYGLA+ + T NID AN  +H + AG+  +       
Sbjct:   417 FGPVMQILKFKSLEEVIERANDSKYGLAAAVFTQNIDKANYISHGLRAGTVWINCYNVFG 476

Query:   567 -QAPFGGFKESGIGRELGKAALDEYTELKTVT 597
              QAPFGG+K SGIGRELG+  LD YTE+KTVT
Sbjct:   477 VQAPFGGYKASGIGRELGEYGLDIYTEVKTVT 508

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=IDA

GO:0006081 "cellular aldehyde metabolic process" evidence=ISS

UNIPROTKB|F1NJC7 ALDH1A1 "Retinal dehydrogenase 1" [Gallus gallus (taxid:9031)]

 Score = 631 (227.2 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
 Identities = 142/272 (52%), Positives = 177/272 (65%)

Query:   343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
             G G   G AA+  + ++  V+ +   +     I  AA  +NLKRV+LELGGKSP +I AD
Sbjct:   230 GFGPTAG-AAISHHMDIDKVSFTG-STEVGKLIKEAAGKTNLKRVTLELGGKSPNIIFAD 287

Query:   403 ADVDMA--------YYYCFVC--AGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQ 452
             AD+D A        +Y+   C  AGSR +V+E IYD F             GDP    VQ
Sbjct:   288 ADLDEAVEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQ 347

Query:   453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 512
             QGPQ+D E F K+L+ I+SG ++G KLE GG   G+KGYFI+PTVFSNVTDD +IA+EEI
Sbjct:   348 QGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEI 407

Query:   513 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG-------SAVV 565
             FGPVQ I+KFKT+DEVI+RAN+T YGLA+ + T +ID A TFA A+ AG       SA  
Sbjct:   408 FGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFS 467

Query:   566 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
              Q PFGGFK SG GRELG+  L EYTE+KTVT
Sbjct:   468 AQCPFGGFKMSGNGRELGEYGLQEYTEVKTVT 499

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

UNIPROTKB|F1NJP8 ALDH1A1 "Retinal dehydrogenase 1" [Gallus gallus (taxid:9031)]

 Score = 631 (227.2 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
 Identities = 142/272 (52%), Positives = 177/272 (65%)

Query:   343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
             G G   G AA+  + ++  V+ +   +     I  AA  +NLKRV+LELGGKSP +I AD
Sbjct:   168 GFGPTAG-AAISHHMDIDKVSFTG-STEVGKLIKEAAGKTNLKRVTLELGGKSPNIIFAD 225

Query:   403 ADVDMA--------YYYCFVC--AGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQ 452
             AD+D A        +Y+   C  AGSR +V+E IYD F             GDP    VQ
Sbjct:   226 ADLDEAVEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQ 285

Query:   453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 512
             QGPQ+D E F K+L+ I+SG ++G KLE GG   G+KGYFI+PTVFSNVTDD +IA+EEI
Sbjct:   286 QGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEI 345

Query:   513 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG-------SAVV 565
             FGPVQ I+KFKT+DEVI+RAN+T YGLA+ + T +ID A TFA A+ AG       SA  
Sbjct:   346 FGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFS 405

Query:   566 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
              Q PFGGFK SG GRELG+  L EYTE+KTVT
Sbjct:   406 AQCPFGGFKMSGNGRELGEYGLQEYTEVKTVT 437

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

UNIPROTKB|P27463 ALDH1A1 "Retinal dehydrogenase 1" [Gallus gallus (taxid:9031)]

 Score = 631 (227.2 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
 Identities = 142/272 (52%), Positives = 177/272 (65%)

Query:   343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
             G G   G AA+  + ++  V+ +   +     I  AA  +NLKRV+LELGGKSP +I AD
Sbjct:   232 GFGPTAG-AAISHHMDIDKVSFTG-STEVGKLIKEAAGKTNLKRVTLELGGKSPNIIFAD 289

Query:   403 ADVDMA--------YYYCFVC--AGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQ 452
             AD+D A        +Y+   C  AGSR +V+E IYD F             GDP    VQ
Sbjct:   290 ADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQ 349

Query:   453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 512
             QGPQ+D E F K+L+ I+SG ++G KLE GG   G+KGYFI+PTVFSNVTDD +IA+EEI
Sbjct:   350 QGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEI 409

Query:   513 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG-------SAVV 565
             FGPVQ I+KFKT+DEVI+RAN+T YGLA+ + T +ID A TFA A+ AG       SA  
Sbjct:   410 FGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFS 469

Query:   566 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
              Q PFGGFK SG GRELG+  L EYTE+KTVT
Sbjct:   470 AQCPFGGFKMSGNGRELGEYGLQEYTEVKTVT 501

GO:0001758 "retinal dehydrogenase activity" evidence=IEA

GO:0042572 "retinol metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|E1BT93 ALDH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 613 (220.8 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
 Identities = 134/272 (49%), Positives = 172/272 (63%)

Query:   343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
             G G   G AA+  + ++  V  +   +   H I  AAA SNLKRV+LELGGKSP +I +D
Sbjct:   242 GYGPTAG-AAISAHMDVDKVAFTG-STEVGHLIKKAAAESNLKRVTLELGGKSPNIIMSD 299

Query:   403 AD----VDMAYYYCFV------CAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQ 452
             AD    VD A++  F       CAGSRTYVQEDIY+ F             G+PFD   +
Sbjct:   300 ADMDWAVDQAHFALFFNQGQCCCAGSRTYVQEDIYNEFVERSVEKAKSRVVGNPFDFKTE 359

Query:   453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 512
             QGPQVD E F K+L YI +G  +G KL  GG    D+GYF++PTVF +V D+  IAREEI
Sbjct:   360 QGPQVDEEQFKKILGYISTGKREGAKLLCGGNPAADRGYFVQPTVFGDVQDNMTIAREEI 419

Query:   513 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------- 565
             FGPV  I+KFKT++E+IERAN++KYGLA+ + T +ID AN  + A+ AG+  V       
Sbjct:   420 FGPVMQIMKFKTIEEIIERANNSKYGLAAAVFTKDIDKANYVSQALRAGTVWVNCYNVFG 479

Query:   566 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
              QAPFGG+K SG GRELG+  L+ Y E+K VT
Sbjct:   480 AQAPFGGYKASGNGRELGEYGLEAYLEVKNVT 511

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

RGD|69219 Aldh2 "aldehyde dehydrogenase 2 family (mitochondrial)" [Rattus norvegicus (taxid:10116)]

 Score = 610 (219.8 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
 Identities = 130/272 (47%), Positives = 172/272 (63%)

Query:   343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
             G G   G AA+  + ++  V  +   +   H I  AA +SNLKRV+LELGGKSP +I +D
Sbjct:   242 GFGPTAG-AAIASHEDVDKVAFTG-STEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSD 299

Query:   403 ADVD----MAYYYCFV------CAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQ 452
             AD+D     A++  F       CAGSRT+VQED+YD F             G+PFD   +
Sbjct:   300 ADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTE 359

Query:   453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 512
             QGPQVD   F K+L YIKSG ++G KL  GG    D+GYFI+PTVF +V D   IA+EEI
Sbjct:   360 QGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEI 419

Query:   513 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------- 565
             FGPV  I+KFKT++EV+ RAN++KYGLA+ + T ++D AN  + A+ AG+  +       
Sbjct:   420 FGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFG 479

Query:   566 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
              Q+PFGG+K SG GRELG+  L  YTE+KTVT
Sbjct:   480 AQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 511

GO:0001889 "liver development" evidence=IEP

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0032355 "response to estradiol stimulus" evidence=IEP

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0032570 "response to progesterone stimulus" evidence=IEP

GO:0032870 "cellular response to hormone stimulus" evidence=IEP

GO:0033574 "response to testosterone stimulus" evidence=IEP

GO:0035094 "response to nicotine" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0055093 "response to hyperoxia" evidence=IEP

GO:0070404 "NADH binding" evidence=IDA

GO:0071398 "cellular response to fatty acid" evidence=IEP

ZFIN|ZDB-GENE-030326-5 aldh2.2 "aldehyde dehydrogenase 2.2" [Danio rerio (taxid:7955)]

 Score = 614 (221.2 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
 Identities = 132/273 (48%), Positives = 176/273 (64%)

Query:   343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
             G+G   G AA+  + ++  V  +       H I  A++ASNLK+V+LELGGKSP +I +D
Sbjct:   239 GMGPTAG-AAIASHMDVDKVAFTGSTD-VGHLIQRASSASNLKKVTLELGGKSPNIILSD 296

Query:   403 ADVD-------MAYYY----CFVCAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSV 451
             A+++       +A ++    C  CAG+RT+VQE IYD F             GDPFD + 
Sbjct:   297 ANMEEAVEQSHIALFFNQGQC-CCAGTRTFVQESIYDEFVERSVERAKNRIVGDPFDLNT 355

Query:   452 QQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 511
             +QGPQV+ + F KVL YI SG  +G KL  GG    ++GYFI+PTVF +V DD  IAREE
Sbjct:   356 EQGPQVNEDQFKKVLGYISSGKREGAKLMCGGAPAAERGYFIQPTVFGDVKDDMTIAREE 415

Query:   512 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP----- 566
             IFGPV  I+KFK+L+EVIERAND+KYGLA  + T +ID AN  +H + AG+  +      
Sbjct:   416 IFGPVMQILKFKSLEEVIERANDSKYGLAGAVFTQDIDKANYISHGLRAGTVWINCYNVF 475

Query:   567 --QAPFGGFKESGIGRELGKAALDEYTELKTVT 597
               QAPFGG+K SGIGRE+G+  L+ YTE+KTVT
Sbjct:   476 GVQAPFGGYKASGIGREMGEYGLENYTEVKTVT 508

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:2001038 "regulation of cellular response to drug" evidence=IMP

MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 607 (218.7 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
 Identities = 132/273 (48%), Positives = 170/273 (62%)

Query:   343 GIGRELGKA-ALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA 401
             G G   G A A  E  +    T S   +   H I  AA +SNLKRV+LELGGKSP +I +
Sbjct:   242 GFGPTAGAAIASHEGVDKVAFTGS---TEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMS 298

Query:   402 DADVD----MAYYYCFV------CAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSV 451
             DAD+D     A++  F       CAGSRT+VQE++YD F             G+PFD   
Sbjct:   299 DADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRT 358

Query:   452 QQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 511
             +QGPQVD   F K+L YIKSG ++G KL  GG    D+GYFI+PTVF +V D   IA+EE
Sbjct:   359 EQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEE 418

Query:   512 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------ 565
             IFGPV  I+KFKT++EV+ RAND+KYGLA+ + T ++D AN  + A+ AG+  +      
Sbjct:   419 IFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVF 478

Query:   566 -PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
               Q+PFGG+K SG GRELG+  L  YTE+KTVT
Sbjct:   479 GAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 511

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0070404 "NADH binding" evidence=ISO

UNIPROTKB|E2RMX7 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 600 (216.3 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
 Identities = 133/272 (48%), Positives = 174/272 (63%)

Query:   343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
             G G   G AA+  + ++  V  +   +     I  AA  SNLKRV+LELGGKSP ++ AD
Sbjct:   219 GYGPTAG-AAISSHMDIDKVAFTG-STEVGKMIKEAAGKSNLKRVTLELGGKSPFIVFAD 276

Query:   403 ADVDMA--------YYYCFVC--AGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQ 452
             +D+D A        +Y+   C  A SR +V+E IYD F             G+P    V 
Sbjct:   277 SDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVS 336

Query:   453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 512
             QGPQ+D + + K+L+ I+SG ++G KLE GG   G+KG+FI+PTVFSNVTD+ +IA+EEI
Sbjct:   337 QGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGFFIQPTVFSNVTDEMRIAKEEI 396

Query:   513 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG-------SAVV 565
             FGPVQ I+KFK+LD+VI+RAN+T YGLA+GI T +ID A T + A+ AG       S V 
Sbjct:   397 FGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKAITVSSALQAGTVWVNCYSVVS 456

Query:   566 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
             PQ PFGGFK SG GRELG+  L EYTE+K VT
Sbjct:   457 PQCPFGGFKMSGNGRELGEYGLQEYTEVKMVT 488

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8S528	AL2B7_ARATH	1, ., 2, ., 1, ., 3	0.5371	0.3719	0.4213	yes	N/A
P47738	ALDH2_MOUSE	1, ., 2, ., 1, ., 3	0.5330	0.3719	0.4335	yes	N/A
P30837	AL1B1_HUMAN	1, ., 2, ., 1, ., 3	0.5371	0.3719	0.4352	yes	N/A
Q66HF8	AL1B1_RAT	1, ., 2, ., 1, ., 3	0.5495	0.3719	0.4335	yes	N/A
Q5R6B5	AL1B1_PONAB	1, ., 2, ., 1, ., 3	0.5413	0.3719	0.4352	yes	N/A
P20000	ALDH2_BOVIN	1, ., 2, ., 1, ., 3	0.5413	0.3719	0.4326	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	605
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	1e-121
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	1e-116
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	1e-103
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	1e-97
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	4e-96
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	6e-92
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-91
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	3e-88
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	3e-83
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	2e-82
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	2e-82
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	2e-81
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	6e-81
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	1e-80
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	3e-80
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	6e-79
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	2e-78
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	3e-78
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	9e-78
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	1e-77
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	2e-77
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	4e-77
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	5e-76
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	6e-75
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	1e-74
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	7e-74
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	3e-73
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	2e-72
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	6e-71
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	2e-70
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	2e-70
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	1e-69
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-68
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	5e-68
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	7e-68
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	9e-68
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	2e-67
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	4e-67
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	1e-66
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	1e-66
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	1e-66
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	1e-66
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	3e-66
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	9e-66
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	5e-65
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	3e-64
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	3e-64
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	6e-64
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	8e-64
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	1e-63
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	4e-63
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	5e-62
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	8e-62
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	9e-61
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	1e-60
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	2e-60
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	2e-60
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	7e-60
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	1e-59
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	1e-59
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	7e-59
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	2e-58
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	3e-58
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	3e-58
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	1e-57
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	3e-57
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	5e-57
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	7e-57
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	7e-57
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	3e-56
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-55
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	3e-54
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	4e-54
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	5e-54
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	9e-54
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	2e-53
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	7e-53
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	1e-52
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	1e-52
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	1e-52
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	2e-52
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	6e-52
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	9e-52
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	1e-51
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	2e-51
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	4e-51
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	5e-51
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	2e-50
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	9e-50
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	2e-49
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	3e-49
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	3e-49
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	3e-49
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	6e-49
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	1e-48
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	2e-48
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	3e-48
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	4e-48
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	5e-48
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	6e-48
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	8e-48
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	1e-47
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	3e-47
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	3e-47
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	3e-47
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	8e-47
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	1e-46
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	1e-46
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	3e-46
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	5e-46
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	5e-46
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	2e-45
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	1e-44
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	1e-44
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	3e-44
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	4e-44
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	7e-44
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	1e-43
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	2e-43
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	4e-43
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	2e-42
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	2e-42
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	1e-41
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-41
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	1e-41
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	2e-41
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	4e-41
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	7e-41
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	1e-40
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	1e-40
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	6e-40
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	2e-39
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	2e-39
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	2e-39
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	6e-39
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	9e-39
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	4e-38
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	5e-38
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	6e-38
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	2e-37
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	2e-37
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	3e-37
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	3e-37
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	5e-37
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	5e-37
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	6e-37
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	8e-37
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	8e-37
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	9e-37
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	8e-36
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	9e-36
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	1e-35
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	2e-35
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	3e-35
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	3e-35
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	4e-35
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	1e-34
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	2e-34
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	2e-34
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	2e-34
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	2e-34
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	4e-34
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	4e-34
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	4e-34
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	5e-34
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	7e-34
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	1e-33
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	4e-33
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	6e-33
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	6e-33
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	6e-33
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	8e-33
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	8e-33
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	9e-33
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	1e-32
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	2e-32
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	2e-32
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	3e-32
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	3e-32
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	5e-32
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	6e-32
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	8e-32
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	1e-31
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	2e-31
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	2e-31
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	4e-31
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	4e-31
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	5e-31
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	6e-31
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	1e-30
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	2e-30
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	2e-30
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	2e-30
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	4e-30
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	6e-30
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	1e-29
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	3e-29
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	4e-29
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	4e-29
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	5e-29
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	7e-29
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	7e-29
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	1e-28
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	5e-27
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	2e-26
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	2e-26
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	4e-26
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	8e-26
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	8e-26
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	9e-26
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	1e-25
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	1e-25
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	2e-25
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	3e-25
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	3e-25
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	4e-25
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	5e-25
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	7e-25
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	2e-24
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	3e-24
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	3e-24
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	8e-24
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	1e-23
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	2e-23
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	3e-23
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	3e-23
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	6e-23
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	2e-22
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	2e-22
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	4e-22
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	5e-22
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	3e-21
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	3e-21
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	6e-21
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	8e-21
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	1e-20
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	2e-20
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	4e-20
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	5e-20
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	8e-20
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	1e-19
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	1e-19
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	1e-19
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	1e-19
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	3e-19
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	4e-19
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	6e-19
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	1e-18
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	2e-18
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	3e-18
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	3e-18
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	5e-18
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	5e-18
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	6e-18
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	7e-18
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	1e-17
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	1e-17
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	2e-17
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	8e-17
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	8e-17
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	8e-17
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	9e-17
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	1e-16
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	1e-16
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	2e-16
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	2e-16
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	3e-16
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	7e-16
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	1e-15
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	1e-15
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	2e-15
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	2e-15
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	4e-15
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	5e-15
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	5e-15
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	6e-15
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	7e-15
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	1e-14
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	2e-14
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	2e-14
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	3e-14
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	5e-14
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	7e-14
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	1e-13
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	1e-13
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	2e-13
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	3e-13
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	4e-13
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	4e-13
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	4e-13
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	6e-13
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	9e-13
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	9e-13
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	1e-12
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	1e-12
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	1e-12
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	1e-12
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	1e-12
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	1e-12
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	2e-12
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	2e-12
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	3e-12
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	3e-12
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	4e-12
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	6e-12
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	1e-11
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	2e-11
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	2e-11
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	3e-11
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	6e-11
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	7e-11
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	9e-11
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	9e-11
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	1e-10
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	2e-10
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	2e-10
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	2e-10
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	2e-10
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	2e-10
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	3e-10
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	3e-10
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	4e-10
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	4e-10
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	1e-09
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	2e-09
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	2e-09
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	2e-09
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	2e-09
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	3e-09
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	3e-09
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	3e-09
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	3e-09
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	3e-09
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	6e-09
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	7e-09
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	9e-09
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	2e-08
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	3e-08
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	4e-08
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	4e-08
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	4e-08
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	5e-08
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	5e-08
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	6e-08
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	7e-08
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	9e-08
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	1e-07
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	1e-07
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	2e-07
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	3e-07
PRK11563	675	PRK11563, PRK11563, bifunctional aldehyde dehydrog	3e-07
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	5e-07
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	6e-07
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	6e-07
PRK11903	521	PRK11903, PRK11903, aldehyde dehydrogenase; Provis	6e-07
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	8e-07
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	2e-06
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	2e-06
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	3e-06
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	6e-06
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	7e-06
PRK11563	675	PRK11563, PRK11563, bifunctional aldehyde dehydrog	7e-06
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	1e-05
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	1e-05
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	2e-05
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	3e-05
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	3e-05
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	3e-05
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	8e-05
PRK11903	521	PRK11903, PRK11903, aldehyde dehydrogenase; Provis	8e-05
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	1e-04
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	2e-04
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	3e-04
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	4e-04
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	0.001
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	0.002
PRK11563	675	PRK11563, PRK11563, bifunctional aldehyde dehydrog	0.002
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	0.002
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	0.002
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	0.003
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	0.003
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	0.003
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	0.004
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	0.004

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  367 bits (945), Expect = e-121
 Identities = 146/242 (60%), Positives = 178/242 (73%), Gaps = 17/242 (7%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFV------CAGSRTYV 422
             I  AA  SNLKRV+LELGGKSP ++ ADAD+D     A+   F       CAGSRT+V
Sbjct: 238 KLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFV 297

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           QE IYD FVK++VE+A  R VG+PFD   +QGPQ+D E F K+L  I+SG ++G KLE G
Sbjct: 298 QESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECG 357

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           GKR GDKGYFI+PTVFS+VTDD +IA+EEIFGPVQ I KFKT+DEVIERAN+T YGLA+ 
Sbjct: 358 GKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAA 417

Query: 543 IVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T +ID A TF++A+ AG+        V PQAPFGG+K SG GRELG+  L EYTE+KT
Sbjct: 418 VFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKT 477

Query: 596 VT 597
           VT
Sbjct: 478 VT 479

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  354 bits (910), Expect = e-116
 Identities = 134/244 (54%), Positives = 168/244 (68%), Gaps = 17/244 (6%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCF------VCAGSRT 420
              +IM AAA SNLK+V+LELGGKSP ++  DAD+D A     +  F       CAGSR 
Sbjct: 232 VGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRI 291

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +VQE IYD FV+K   +A  R VGDPFD    QGPQV    F K+L+YI+SG ++G  L 
Sbjct: 292 FVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLL 351

Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
            GG+R G KGYFI+PTVF++V DD KIA+EEIFGPV TI+KFKT DEVIERANDT+YGLA
Sbjct: 352 TGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLA 411

Query: 541 SGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTEL 593
           +G+ T +I+ A   + A+ AG+  V          PFGGFK+SG GRELG+  L+EYT++
Sbjct: 412 AGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQV 471

Query: 594 KTVT 597
           K VT
Sbjct: 472 KAVT 475

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  319 bits (819), Expect = e-103
 Identities = 137/239 (57%), Positives = 172/239 (71%), Gaps = 17/239 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           IM  AA SNLK V+LELGGKSP ++C DADVD    +A++  F       CAGSRT+V E
Sbjct: 236 IMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHE 295

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD FV+KA  +A  R VGDPF K V+QGPQVD E F K+L+YI+ G E+G  L  GG 
Sbjct: 296 SIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGD 355

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
           R G KGY+I+PT+FS+V DD KIAR+EIFGPVQ+I+KFKT+DEVI+RAN++KYGLA+G+ 
Sbjct: 356 RIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVF 415

Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
           + NIDTANT + A+ AG+  V          PFGG+K SGIGRE G  AL+ Y ++K V
Sbjct: 416 SKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAV 474

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  308 bits (790), Expect = 1e-97
 Identities = 138/249 (55%), Positives = 175/249 (70%), Gaps = 18/249 (7%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRT 420
           T   ++  AA SNLK V+LELGGKSP ++C DADVD    +A++  F       CAGSRT
Sbjct: 286 TGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRT 345

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +V E +YD FV+KA  +A  R VGDPF K V+QGPQ+D+E F K+L YIKSGVE G  LE
Sbjct: 346 FVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLE 405

Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
            GG R G KGY+I+PTVFSNV DD  IA++EIFGPVQ+I+KFK LDEVI RAN+T+YGLA
Sbjct: 406 CGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLA 465

Query: 541 SGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTEL 593
           +G+ T N+DTANT + A+  G+  V          PFGG+K SGIGRE G  +L+ Y ++
Sbjct: 466 AGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQV 525

Query: 594 KTVTESPLR 602
           K V  +PL+
Sbjct: 526 KAVV-TPLK 533

Length = 538

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  301 bits (773), Expect = 4e-96
 Identities = 117/240 (48%), Positives = 150/240 (62%), Gaps = 22/240 (9%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVD--------MAYYY----CFVCAGSRTYVQE 424
           A AAA NLKRV+LELGGK+PL++  DAD+D         A+      C   AGSR  V E
Sbjct: 222 AKAAAKNLKRVTLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVC--TAGSRLLVHE 279

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD FV++ VE A + KVGDP D     GP +  +   +VL+YI+   E+G KL  GG+
Sbjct: 280 SIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGE 339

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              +KGYF+EPTV ++VT D +IA+EEIFGPV ++I FK  DE IE ANDT+YGLA+G+ 
Sbjct: 340 AGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVF 399

Query: 545 TTNIDTANTFAHAINAGS--------AVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
           T +++ A   A  + AG               PFGGFK+SG GRE GK  L+EYTE KTV
Sbjct: 400 TNDLERALRVARRLEAGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  292 bits (748), Expect = 6e-92
 Identities = 138/245 (56%), Positives = 175/245 (71%), Gaps = 18/245 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQE 424
           IM AAA SNLK+VSLELGGKSPL+I  DADVDMA         Y    +C A SR YVQE
Sbjct: 253 IMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQE 312

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD FVKK VEKA    VGDPFD   +QGPQVD + F K+L+YI+ G  +G  L  GGK
Sbjct: 313 GIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK 372

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
             GDKGY+IEPT+F++VT+D KIA++EIFGPV +++KFKT++E I++AN+TKYGLA+GIV
Sbjct: 373 PCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIV 432

Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T ++D ANT + +I AG+  V       P  PFGG+K SG GR+ G  ALD+Y ++K+V 
Sbjct: 433 TKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVV 492

Query: 598 ESPLR 602
            +PL 
Sbjct: 493 -TPLY 496

Length = 501

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  288 bits (740), Expect = 1e-91
 Identities = 116/243 (47%), Positives = 148/243 (60%), Gaps = 19/243 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD--------MAYYYC--FVCAGSRTYVQE 424
            +  AAA NLKRV+LELGGKSPL++  DAD+D         A+        A SR  V E
Sbjct: 190 AIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHE 249

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD FV++ VE+  A KVG+P D     GP + A    +VL YI+    +G KL  GGK
Sbjct: 250 SIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGK 309

Query: 485 R-KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           R +G KGYF+ PTV ++V  D  IA+EEIFGPV  +I FK  +E IE ANDT+YGLA+G+
Sbjct: 310 RLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGV 369

Query: 544 VTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
            T +++ A   A  + AG+  +        P APFGG K+SGIGRE G   L+EYTE KT
Sbjct: 370 FTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKT 429

Query: 596 VTE 598
           VT 
Sbjct: 430 VTI 432

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  281 bits (721), Expect = 3e-88
 Identities = 135/274 (49%), Positives = 180/274 (65%), Gaps = 23/274 (8%)

Query: 342 SGIGRELGKAALDEYTELKTV--TESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVI 399
           SG GR  G  A+  + ++  V  T S L       +M AAA SNLK+V+LELGGKSP ++
Sbjct: 208 SGYGRTCG-NAISSHMDIDKVAFTGSTL---VGRKVMEAAAKSNLKKVTLELGGKSPNIV 263

Query: 400 CADADVDMAYYYC----------FVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDK 449
             DAD++ A  +             CAGSR YVQE IYD FVK+  EKA   KVGDPF +
Sbjct: 264 FDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAE 323

Query: 450 SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR 509
              QGPQV    + ++++YI+SG  +G  +E GGKR G++GYFIEPT+F++VT+D KI +
Sbjct: 324 DTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVK 383

Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---- 565
           EEIFGPV  +IKFKT +E I+RAND+ YGLA+ + T NI+ A   A+A+ AG+  V    
Sbjct: 384 EEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYN 443

Query: 566 ---PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
               Q PFGG+K+SGIGRELG+ AL+ YT++K V
Sbjct: 444 LLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  267 bits (685), Expect = 3e-83
 Identities = 112/242 (46%), Positives = 142/242 (58%), Gaps = 21/242 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYV 422
           ++ A AA  +KRVSLELGG +P ++  DAD+D      +A  +      C VCA +R YV
Sbjct: 211 LLMAQAADTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTC-VCA-NRIYV 268

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
            E IYD FV+K VE+    KVG+  D+    GP ++     KV   ++  V +G K+  G
Sbjct: 269 HESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTG 328

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           GKR G  GYF EPTV ++VTDD  I  EE FGPV  II F T DEVI RANDT YGLA+ 
Sbjct: 329 GKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAY 388

Query: 543 IVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T ++  A   A A       IN G     +APFGG KESG+GRE GK  L+EY E K 
Sbjct: 389 VFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKY 448

Query: 596 VT 597
           V+
Sbjct: 449 VS 450

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  266 bits (682), Expect = 2e-82
 Identities = 117/250 (46%), Positives = 152/250 (60%), Gaps = 25/250 (10%)

Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYY----CFVCAGSRTY 421
             +AAAAA+NLK V+LELGGKSP ++  DAD+D A        ++     C   A SR  
Sbjct: 226 RAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRC--TAASRLI 283

Query: 422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
           V E +YD FV++ V +AA+ KVGDP D S   GP +  E   +V  YI+  V +G +L A
Sbjct: 284 VHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLA 343

Query: 482 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
           GGKR G  GYF+EPT+   VT D +IAREEIFGPV  +I+FK  +E IE ANDT+YGLA+
Sbjct: 344 GGKRPG--GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAA 401

Query: 542 GIVTTNIDTANTFAHAINAG---------SAVVPQAPFGGFKESGIGRELGKAALDEYTE 592
            I T ++  A   A  + AG          A +   PFGG K+SG+GRE GK  L+E+TE
Sbjct: 402 AIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTE 461

Query: 593 LKTVTESPLR 602
           +KTVT     
Sbjct: 462 VKTVTIKLGP 471

Length = 472

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  266 bits (681), Expect = 2e-82
 Identities = 139/390 (35%), Positives = 185/390 (47%), Gaps = 97/390 (24%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M AWK  PALAAG  V+LKPAEQ+PLTAL +A L  +AG P GV++V+PG+G        
Sbjct: 140 MAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGH------- 192

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---- 116
                                        +A                  VDA+ FT    
Sbjct: 193 --------------------------TAGEALGLH------------MDVDALAFTGSTE 214

Query: 117 ---KVLNYIKSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP-- 168
              + L Y  SG +   K   LE GGK        I   VF++  D    A     G   
Sbjct: 215 VGRRFLEY--SG-QSNLKRVWLECGGKSP-----NI---VFADAPDLDAAAEAAAAGIFW 263

Query: 169 -------------VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS 215
                        V   IK + L++V+  A + K G             +    A   G+
Sbjct: 264 NQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPG-------------DPLDPATRMGA 310

Query: 216 -VDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIF 272
            V    F KVL YI+SG  +G +L AGGKR      G+F+EPTVF  VT D +IAREEIF
Sbjct: 311 LVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIF 370

Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
           GPV ++I F + +E +  AND+ YGLA+ + T+++  A+  A  + AG+VW+NC+     
Sbjct: 371 GPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDI 430

Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTV 362
             PFGGFK+SG GR+    ALD+YTELKT 
Sbjct: 431 TTPFGGFKQSGNGRDKSLHALDKYTELKTT 460

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  263 bits (674), Expect = 2e-81
 Identities = 120/279 (43%), Positives = 162/279 (58%), Gaps = 30/279 (10%)

Query: 343 GIGRELGKAALDEYTELKTVT---ESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVI 399
           G G E G AAL  + ++  ++   E+     T  +IM AAA  NLK VSLELGGK+P ++
Sbjct: 182 GFGPEAG-AALVAHPDVDLISFTGETA----TGRTIMRAAAP-NLKPVSLELGGKNPNIV 235

Query: 400 CADADVDMAY------YYCF---VC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDK 449
            ADAD+D A        +     VC AGSR  VQ  IYD F+++ VE+A A KVGDP D 
Sbjct: 236 FADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDP 295

Query: 450 SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTDDF 505
             + GP +  E   KVL Y++    +G  +  GG R      + GYF+EPTV + + +D 
Sbjct: 296 DTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDS 355

Query: 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV 565
           ++A+EEIFGPV T+I F   +E IE ANDT YGLA+ + T ++  A+  A  + AG+  V
Sbjct: 356 RVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWV 415

Query: 566 P-------QAPFGGFKESGIGRELGKAALDEYTELKTVT 597
                   + PFGG K SGIGRE G  +L+ YTELK V 
Sbjct: 416 NCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  262 bits (672), Expect = 6e-81
 Identities = 99/148 (66%), Positives = 121/148 (81%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +D E F K+L  I+SG ++G KLE GGKR GDKGYFI+PTVFS+VTDD +IA+EEIFGPV
Sbjct: 332 IDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPV 391

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
           Q I KFKT+DEVIERAN+T YGLA+ + T +ID A TF++A+ AG+VW+NCY  V PQAP
Sbjct: 392 QQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAP 451

Query: 336 FGGFKESGIGRELGKAALDEYTELKTVT 363
           FGG+K SG GRELG+  L EYTE+KTVT
Sbjct: 452 FGGYKMSGNGRELGEYGLQEYTEVKTVT 479

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  262 bits (671), Expect = 1e-80
 Identities = 108/249 (43%), Positives = 149/249 (59%), Gaps = 26/249 (10%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD-------MAYYYCF--VCA-GSRT 420
           T   +MAAAAAS LK V++ELGGKSPL++  DAD+D       +A +Y    VC  G+R 
Sbjct: 232 TGKKVMAAAAAS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRV 290

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +VQ+ I   F  + +E+    ++GDP D +   GP V      KVL YI+ G  +G +L 
Sbjct: 291 FVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLL 350

Query: 481 AGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
            GG+R        G F+ PTVF++ TDD  I REEIFGPV +++ F   DEVI RANDT+
Sbjct: 351 CGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTE 410

Query: 537 YGLASGIVTTNIDTANTFAHAINAG---------SAVVPQAPFGGFKESGIGRELGKAAL 587
           YGLA+G+ T ++  A+   H + AG         S    + P GG+K+SGIGRE G A L
Sbjct: 411 YGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPA--EMPVGGYKQSGIGRENGIATL 468

Query: 588 DEYTELKTV 596
           + YT++K+V
Sbjct: 469 EHYTQIKSV 477

Length = 488

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  260 bits (666), Expect = 3e-80
 Identities = 110/242 (45%), Positives = 147/242 (60%), Gaps = 21/242 (8%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFV-----C-AGSRTYVQED 425
           +A AAA NL  V+LELGGKSP ++  DAD+D A        F      C AGSR  VQ  
Sbjct: 214 IARAAAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRS 273

Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
           IYD FV++ V +A A +VGDP D   Q GP        KV  Y+    E+G ++  GG+R
Sbjct: 274 IYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGER 333

Query: 486 ----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
                   GYF EPT+ ++VT+D +IA+EE+FGPV ++I F   +E I  AND++YGLA+
Sbjct: 334 PSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAA 393

Query: 542 GIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
           GI T ++  A+  A AI AG+       A+ P +PFGGFK+SGIGRE G  A+ EYT+ K
Sbjct: 394 GIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTK 453

Query: 595 TV 596
           +V
Sbjct: 454 SV 455

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  256 bits (656), Expect = 6e-79
 Identities = 106/248 (42%), Positives = 151/248 (60%), Gaps = 23/248 (9%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD-------MAYYYCF--VCA-GSRT 420
           T   +M+AAA   +K V+LELGGKSPL+I  DAD++       MA +     VC+ G+R 
Sbjct: 206 TGKKVMSAAAK-GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRV 264

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +VQ  I D F ++ VE+    ++GDP D+  Q G  +  E   KVL YI+S  ++G K+ 
Sbjct: 265 FVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVL 324

Query: 481 AGGKR-----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535
            GG+R       + G+++ P V ++ TDD  I REEIFGPV +I+ F T +EVI RANDT
Sbjct: 325 CGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDT 384

Query: 536 KYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALD 588
            YGLA+G+ T ++  A+     + AG+  +        + PFGG+K+SG GRE G AAL+
Sbjct: 385 TYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALE 444

Query: 589 EYTELKTV 596
            YT+LKTV
Sbjct: 445 HYTQLKTV 452

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  255 bits (654), Expect = 2e-78
 Identities = 94/146 (64%), Positives = 118/146 (80%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SRT+VQE IYD FVK++VE+A  R VG+PFD   +QGPQ+D   F K+L  I+SG ++G 
Sbjct: 293 SRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGA 352

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           KLE GGKR GDKGYFI+PTVFS+VTDD +IA+EEIFGPVQ I KFKT+DEVIERAN+T Y
Sbjct: 353 KLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTY 412

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GLA+ + T +ID A TF++A+ AG+V
Sbjct: 413 GLAAAVFTKDIDKAITFSNALRAGTV 438

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  255 bits (654), Expect = 3e-78
 Identities = 141/378 (37%), Positives = 194/378 (51%), Gaps = 76/378 (20%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M AWK  PALAAG  ++LKP+E TPL+ALY+  L  +AGFP GVI+V+ GYG        
Sbjct: 160 MCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYG-------- 211

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---- 116
                                            R  G+    ++     +D V FT    
Sbjct: 212 ---------------------------------RTCGN----AISSHMDIDKVAFTGSTL 234

Query: 117 ---KVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFK-----IAREEI 165
              KV+        +   LE GGK      D        V++     F       A   I
Sbjct: 235 VGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRI 294

Query: 166 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG-SVDAEMFTKV 224
           +  VQ  I  K +    E+A   K G             + FA     G  V    + ++
Sbjct: 295 Y--VQEGIYDKFVKRFKEKAKKLKVG-------------DPFAEDTFQGPQVSQIQYERI 339

Query: 225 LNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 284
           ++YI+SG  +G  +E GGKR G++GYFIEPT+F++VT+D KI +EEIFGPV  +IKFKT 
Sbjct: 340 MSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTE 399

Query: 285 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI 344
           +E I+RAND+ YGLA+ + T NI+ A   A+A+ AG+VW+NCY  +  Q PFGG+K+SGI
Sbjct: 400 EEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGI 459

Query: 345 GRELGKAALDEYTELKTV 362
           GRELG+ AL+ YT++K V
Sbjct: 460 GRELGEYALENYTQIKAV 477

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  253 bits (649), Expect = 9e-78
 Identities = 109/241 (45%), Positives = 141/241 (58%), Gaps = 20/241 (8%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADAD-----VDMAYYYCF-----VC-AGSRTYVQE 424
           +  +  SNLKRV LE GGKSP ++ ADA       + A    F     VC AGSR  V E
Sbjct: 220 LEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHE 279

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I D F++K V  A   K GDP D + + G  V    F KVL YI+SG  +G +L AGGK
Sbjct: 280 SIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGK 339

Query: 485 R--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           R      G+F+EPTVF  VT D +IAREEIFGPV ++I F + +E +  AND+ YGLA+ 
Sbjct: 340 RVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAAS 399

Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T+++  A+  A  + AG+  V          PFGGFK+SG GR+    ALD+YTELKT
Sbjct: 400 VWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKT 459

Query: 596 V 596
            
Sbjct: 460 T 460

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  253 bits (649), Expect = 1e-77
 Identities = 102/240 (42%), Positives = 138/240 (57%), Gaps = 19/240 (7%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMAYYY----CF-----VC-AGSRTYVQEDI 426
           A AAA  +KRV+LELGGKS  +I  DAD++ A       CF      C A +R  V    
Sbjct: 226 AEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSR 285

Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
           Y    + A   A A  VGDP D +   GP   A  F +V  YI+ G+E+G +L AGG  +
Sbjct: 286 YAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGR 345

Query: 487 G---DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
               ++GYF++PTVF++VT D  IAREEIFGPV +II +   DE I  ANDT YGLA  +
Sbjct: 346 PEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYV 405

Query: 544 VTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
            + + + A   A  + AG   +      P APFGG+K+SG GRE G+  L+E+ E+K++ 
Sbjct: 406 WSADPERARAVARRLRAGQVHINGAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  253 bits (649), Expect = 2e-77
 Identities = 112/247 (45%), Positives = 148/247 (59%), Gaps = 22/247 (8%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRT 420
           T  SIM AAA  N+K+V+LELGGK+P ++ ADAD + A              VC AGSR 
Sbjct: 225 TGRSIMRAAAG-NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRL 283

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
            V+E I+D FV    E+A   K+G+  D   + GP V AE   KVL+YI+ G E+G +L 
Sbjct: 284 LVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLV 343

Query: 481 AGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
            GGKR       KGYF+EPT+F +V    +I +EEIFGPV T+ +F T +E I  ANDT 
Sbjct: 344 CGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTP 403

Query: 537 YGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDE 589
           YGLA  + T +I  AN  A  + AG+  +        +AP+GG+K+SGIGRELG   L+E
Sbjct: 404 YGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEE 463

Query: 590 YTELKTV 596
           Y E K +
Sbjct: 464 YQETKHI 470

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  252 bits (646), Expect = 4e-77
 Identities = 87/148 (58%), Positives = 112/148 (75%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           V    F K+L+YI+SG ++G  L  GG+R G KGYFI+PTVF++V DD KIA+EEIFGPV
Sbjct: 328 VSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPV 387

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
            TI+KFKT DEVIERANDT+YGLA+G+ T +I+ A   + A+ AG+VW+N Y       P
Sbjct: 388 VTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVP 447

Query: 336 FGGFKESGIGRELGKAALDEYTELKTVT 363
           FGGFK+SG GRELG+  L+EYT++K VT
Sbjct: 448 FGGFKQSGFGRELGEEGLEEYTQVKAVT 475

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  248 bits (636), Expect = 5e-76
 Identities = 113/239 (47%), Positives = 151/239 (63%), Gaps = 18/239 (7%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMA-----YYYCF----VC-AGSRTYVQEDI 426
           AAAAA NLK+VSLELGGK+P ++ ADAD+D A     +   F     C +GSR  V E I
Sbjct: 215 AAAAARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESI 274

Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR- 485
            D FV   V ++   +VGDP D   + G  ++     K+ +Y+ +G  +G  L  GG+R 
Sbjct: 275 ADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERL 334

Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
               G F +PT+F++VT D  IAREEIFGPV +++ F T+DE I  ANDT YGL++G+ +
Sbjct: 335 ASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWS 394

Query: 546 TNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
            +IDTA T A  I AG+  V       P+ PFGGFK+SGIGRELG+  ++EYTELKTV 
Sbjct: 395 KDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  246 bits (631), Expect = 6e-75
 Identities = 112/243 (46%), Positives = 143/243 (58%), Gaps = 21/243 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----------CAGSRTYVQE 424
           ++  AAA NLK V+LE GGKSP ++  DAD+D A  +              A SR YVQE
Sbjct: 238 LVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQE 297

Query: 425 DIYDTFVKKAVEKAAAR-KVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
            IYD FV+K VE      KVG PFD     GPQV    + +VL+YI+ G ++G KL  GG
Sbjct: 298 SIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGG 357

Query: 484 ---KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
                   KGYFI PT+F++V  D +I +EEIFGPV  I KFKT +E I++ANDT YGLA
Sbjct: 358 EKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLA 417

Query: 541 SGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTEL 593
           + + T +I  A+  A  + AG   +          PFGGFK SGIGRELG+  L+ YT+ 
Sbjct: 418 AAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQT 477

Query: 594 KTV 596
           K V
Sbjct: 478 KAV 480

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  245 bits (627), Expect = 1e-74
 Identities = 119/273 (43%), Positives = 167/273 (61%), Gaps = 24/273 (8%)

Query: 343 GIGRELGKAALDEYTELKTV--TESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVIC 400
           G G   G AAL E+ ++  +  T S         IM  AA  NLKRVSLELGGKS  ++ 
Sbjct: 182 GFGEVAG-AALVEHPDVDKITFTGST---AVGRKIMQGAAG-NLKRVSLELGGKSANIVF 236

Query: 401 ADADVDMA---------YYYCFVC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKS 450
           ADAD+D A         Y    +C AGSR  V E IYD F+++    A + + GDP D  
Sbjct: 237 ADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPK 296

Query: 451 VQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIARE 510
            Q GP V    F +VL+Y+  G E+G +L  GGKR G +G+F+EPT+F+ V  + +IA+E
Sbjct: 297 TQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQE 356

Query: 511 EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-------A 563
           EIFGPV ++++F+  +E +  AN T+YGLA+G+ T ++  A+  A A+ AG+        
Sbjct: 357 EIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNR 416

Query: 564 VVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
             P +PFGG+K+SG GRE+G+ ALDEYTE+K+V
Sbjct: 417 FDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  242 bits (620), Expect = 7e-74
 Identities = 94/239 (39%), Positives = 132/239 (55%), Gaps = 21/239 (8%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQEDI 426
              A  +LK+V+LELGG +PL++  DAD+D+A          +   +C A  R  V E +
Sbjct: 195 GELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESV 254

Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
           YD FV+K V KA A  VGDP D     GP ++     +V   ++  V  G +L  GG  +
Sbjct: 255 YDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYE 314

Query: 487 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT 546
           G    F +PTV S+VT D  I REEIFGPV  +I F   +E +E ANDT+YGL++ + T 
Sbjct: 315 GL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTR 371

Query: 547 NIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           +++ A  FA  +  G   +        P  PFGG K SG GR  G A+L+E+TE + +T
Sbjct: 372 DLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  242 bits (619), Expect = 3e-73
 Identities = 117/279 (41%), Positives = 159/279 (56%), Gaps = 32/279 (11%)

Query: 343 GIGRELGKAALDEYTELKTVTESPLRSYTSHS----IMAAAAASNLKRVSLELGGKSPLV 398
           G G E+G  AL E+ ++  V      S+T  +     +AAAAA+   RV LE+GGK+PLV
Sbjct: 200 GSGSEVG-QALVEHPDVDAV------SFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLV 252

Query: 399 ICADAD----VDMAYYYCFVCAG------SRTYVQEDIYDTFVKKAVEKAAARKVGDPFD 448
           +  DAD    V+ A    F   G      SR  V E I+D FV+  VE+  A KVGD  D
Sbjct: 253 VLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALD 312

Query: 449 KSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFK 506
           + V  GP V      K L YI+    +G KL  GG+R  + D+GY++ P +F+ VT+D +
Sbjct: 313 EGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMR 372

Query: 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV- 565
           IAREEIFGPV  +I+ +  DE +  ANDT++GL++GIVTT++  A  F   + AG  +V 
Sbjct: 373 IAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVN 432

Query: 566 -------PQAPFGGFKESGIG-RELGKAALDEYTELKTV 596
                     PFGG K S  G RE G+AAL+ YT +KTV
Sbjct: 433 LPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  240 bits (614), Expect = 2e-72
 Identities = 87/146 (59%), Positives = 109/146 (74%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR +VQE IYD FV+K   +A  R VGDPFD    QGPQV    F K+L+YI+SG ++G 
Sbjct: 289 SRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGA 348

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            L  GG+R G KGYFI+PTVF++V DD KIA+EEIFGPV TI+KFKT DEVIERANDT+Y
Sbjct: 349 TLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEY 408

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GLA+G+ T +I+ A   + A+ AG+V
Sbjct: 409 GLAAGVFTKDINKALRVSRALKAGTV 434

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  236 bits (604), Expect = 6e-71
 Identities = 133/390 (34%), Positives = 178/390 (45%), Gaps = 97/390 (24%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
             AWK  PALAAG  V++KP+E TPLT + +  L ++AG P GV++++ G G        
Sbjct: 150 QAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGA------- 202

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
                                              VG    +S    P VD V FT    
Sbjct: 203 ----------------------------------TVGAELAES----PDVDLVSFTGGTA 224

Query: 121 YIKSGVEQGGK------LEAGGKRKGDKGYFIEPT-VFSNVTDDFKIAREE-IFGP---- 168
             +S +           LE GGK          P  VF++   DF+ A ++ + G     
Sbjct: 225 TGRSIMRAAAGNVKKVALELGGK---------NPNIVFADA--DFETAVDQALNGVFFNA 273

Query: 169 -----------VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-V 216
                      V+  I  K +  + ERA   K G             N        G  V
Sbjct: 274 GQVCSAGSRLLVEESIHDKFVAALAERAKKIKLG-------------NGLDADTEMGPLV 320

Query: 217 DAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIF 272
            AE   KVL+YI+ G E+G +L  GGKR       KGYF+EPT+F +V    +I +EEIF
Sbjct: 321 SAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIF 380

Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
           GPV T+ +F T +E I  ANDT YGLA  + T +I  AN  A  + AG+VWIN Y     
Sbjct: 381 GPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFA 440

Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTV 362
           +AP+GG+K+SGIGRELG   L+EY E K +
Sbjct: 441 EAPWGGYKQSGIGRELGPTGLEEYQETKHI 470

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  234 bits (600), Expect = 2e-70
 Identities = 137/395 (34%), Positives = 179/395 (45%), Gaps = 99/395 (25%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           + AWK  PALAAG  V+LKP+EQTPL+AL +A L  +AG P GV++V+ G G        
Sbjct: 149 LAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGG-------- 200

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---K 117
                                             +VGD         P VDA+ FT    
Sbjct: 201 ---------------------------------AEVGDALVAH----PDVDAISFTGSTA 223

Query: 118 VLNYIKSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 174
           V   I +      K   LE GGK          P +   V +D  +        V   + 
Sbjct: 224 VGRAIAAAAAANLKPVTLELGGK---------SPAI---VLEDADLDAA-----VDAAVF 266

Query: 175 FKTL-------------------DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS 215
                                  DE +ER        AS  V   +D +      I+   
Sbjct: 267 GAFFNAGQRCTAASRLIVHESVYDEFVERLVAR---AASLKVGDPLDPSTDLGPLISEEQ 323

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +D     +V  YI+  V +G +L AGGKR G  GYF+EPT+   VT D +IAREEIFGPV
Sbjct: 324 LD-----RVEGYIEDAVAEGARLLAGGKRPG--GYFVEPTILEGVTPDMRIAREEIFGPV 376

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQ 333
             +I+FK  +E IE ANDT+YGLA+ I T ++  A   A  + AG V IN Y   A +  
Sbjct: 377 LPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAY 436

Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVTESPLR 368
            PFGG K+SG+GRE GK  L+E+TE+KTVT     
Sbjct: 437 LPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLGP 471

Length = 472

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  234 bits (598), Expect = 2e-70
 Identities = 109/240 (45%), Positives = 151/240 (62%), Gaps = 21/240 (8%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQED 425
           + AAAA +LK V++ELGGKSPL++  DAD++ A         +    VC  G+R +V + 
Sbjct: 228 IMAAAAGHLKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKK 287

Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
           I + F+ + VE+    K+GDPFD++ + GP + A    KVL+YI+ G  +G  L  GG R
Sbjct: 288 IKERFLARLVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGR 347

Query: 486 ----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
                   G+F+EPTVF++ TDD  I REEIFGPV T++ F   DEVI RANDT+YGLA 
Sbjct: 348 PENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAG 407

Query: 542 GIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELK 594
           G+ T ++  A+  A  + AG+  +        +APFGG+K+SGIGRE GKAAL  YTE+K
Sbjct: 408 GVFTADLGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score =  232 bits (594), Expect = 1e-69
 Identities = 112/242 (46%), Positives = 151/242 (62%), Gaps = 19/242 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFV-----C-AGSRTYVQE 424
           IM + A SNLK+VSLELGGKSPL+I AD D+D    M     F      C A  R +V+E
Sbjct: 242 IMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEE 301

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I+D FV++ VE+    K+GDP D+S   GPQ       K++ Y + GV++G  L  GGK
Sbjct: 302 SIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGK 361

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASG 542
           +    G+F EPTVF++V D   IA+EE FGP+  I KF    +D V++RANDT+YGLASG
Sbjct: 362 QVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASG 421

Query: 543 IVTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T +I+ A   +  + AG+  V         APFGGFK+SG G++LG+ AL+EY + KT
Sbjct: 422 VFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKT 481

Query: 596 VT 597
           VT
Sbjct: 482 VT 483

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  229 bits (586), Expect = 1e-68
 Identities = 109/247 (44%), Positives = 151/247 (61%), Gaps = 20/247 (8%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYY----CF-----VC-AGSRT 420
           T   +M AAA  ++K VSLELGGKSP+++  DAD++ A  +    CF     +C A SR 
Sbjct: 211 TGSQVMQAAAQ-DIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRL 269

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
            V E I D F+++    A A +VGDP ++ V+ GP V    + KVL++I  G E+G +L 
Sbjct: 270 LVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLL 329

Query: 481 AGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
            GG+R    +KGYFI PTVF++V  D +I REEIFGPV  +  F T DE I  AND++YG
Sbjct: 330 CGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYG 389

Query: 539 LASGIVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYT 591
           LA+ +++ + +  +  A A       IN      PQAP+GG+K SGIGRELG+  LD Y 
Sbjct: 390 LAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYL 449

Query: 592 ELKTVTE 598
           E+K +T 
Sbjct: 450 EVKQITR 456

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  228 bits (583), Expect = 5e-68
 Identities = 115/274 (41%), Positives = 155/274 (56%), Gaps = 23/274 (8%)

Query: 342 SGIGRELGKA-ALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVIC 400
           +G G  +G A        + ++T S   +     IM AAA  N+ +VSLELGGK+P ++ 
Sbjct: 197 TGRGSVVGDALVAHPKVGMISLTGS---TEAGQKIMEAAAE-NITKVSLELGGKAPAIVM 252

Query: 401 ADADVDMAYYYCF---------VC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKS 450
            DAD+D+A              VC    R YV EDIYD F++K VEK  A KVGDPFD +
Sbjct: 253 KDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAA 312

Query: 451 VQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAR 509
              GP V+     KV   ++  VE G  L  GGKR +G+KGYF EPTV +NV  D +I +
Sbjct: 313 TDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQ 372

Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAP 569
           EEIFGPV  ++KF +LDE IE AND++YGL S I T N++TA    + +  G   + +  
Sbjct: 373 EEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINREN 432

Query: 570 F-------GGFKESGIGRELGKAALDEYTELKTV 596
           F        G+K+SG+G   GK  L+EY + K V
Sbjct: 433 FEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVV 466

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  227 bits (581), Expect = 7e-68
 Identities = 135/375 (36%), Positives = 175/375 (46%), Gaps = 75/375 (20%)

Query: 3   AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKS 62
           +WK  PALAAG  ++ KP+E TPLTAL VA + ++AG P GV +V+ G G    P     
Sbjct: 151 SWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPL---- 206

Query: 63  CLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYI 122
                                    V K +       F   V  G ++   M     +  
Sbjct: 207 -------------------LVNHPDVAKVS-------FTGGVPTGKKI---MAAAAGHLK 237

Query: 123 KSGVEQGGK------------LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ 170
              +E GGK                G   G   +F    V SN T  F          V 
Sbjct: 238 HVTMELGGKSPLIVFDDADLESAVDGAMLG--NFFSAGQVCSNGTRVF----------VH 285

Query: 171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNYIK 229
             IK + L  ++ER             T  I   + F  A   G  + A    KVL+YI+
Sbjct: 286 KKIKERFLARLVER-------------TERIKLGDPFDEATEMGPLISAAHRDKVLSYIE 332

Query: 230 SGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 285
            G  +G  L  GG R        G+F+EPTVF++ TDD  I REEIFGPV T++ F   D
Sbjct: 333 KGKAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDED 392

Query: 286 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIG 345
           EVI RANDT+YGLA G+ T ++  A+  A  + AG+VWIN Y     +APFGG+K+SGIG
Sbjct: 393 EVIARANDTEYGLAGGVFTADLGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIG 452

Query: 346 RELGKAALDEYTELK 360
           RE GKAAL  YTE+K
Sbjct: 453 RENGKAALAHYTEVK 467

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  227 bits (581), Expect = 9e-68
 Identities = 97/177 (54%), Positives = 128/177 (72%), Gaps = 5/177 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SRT+V E IYD FV+KA  +A  R VGDPF K V+QGPQVD   F K+L+YI+ G E+G 
Sbjct: 289 SRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGA 348

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            L  GG R G KGY+I+PT+FS+V DD KIAR+EIFGPVQ+I+KFKT+DEVI+RAN++KY
Sbjct: 349 TLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKY 408

Query: 191 GLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKG 246
           GLA+G+ + NIDTANT + A+ AG+V    +    +   + +  GG K+   G+ KG
Sbjct: 409 GLAAGVFSKNIDTANTLSRALKAGTVWVNCY----DVFDASIPFGGYKMSGIGREKG 461

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  227 bits (580), Expect = 2e-67
 Identities = 101/244 (41%), Positives = 130/244 (53%), Gaps = 26/244 (10%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADA-----DVDMAYYYCFV----------CAGSRTY 421
              AA NL  V+LELGGKSP +   DA     D D       +             SR  
Sbjct: 231 MQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRAL 290

Query: 422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
           VQE IYD F+++AVE+  A KVG+P D     G QV  +   K+L+Y+  G E+G ++  
Sbjct: 291 VQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLT 350

Query: 482 GGKRK----GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
           GG+R      DKGYF EPT+     +D +I +EEIFGPV  +I FK  +E I  ANDT+Y
Sbjct: 351 GGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEY 410

Query: 538 GLASGIVTTNIDTANTFAHAINAGSA------VVPQ-APFGGFKESGIGRELGKAALDEY 590
           GL  G+ T +I+ A   A  I  G          P  APFGG+K+SGIGRE  K  LD Y
Sbjct: 411 GLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHY 470

Query: 591 TELK 594
            + K
Sbjct: 471 QQTK 474

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  225 bits (575), Expect = 4e-67
 Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 21/240 (8%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF-----VC-AGSRTYVQED 425
           +A  A  +LK+++LELGGK+PL++ ADAD+D     A +  F     +C + SR  V+E 
Sbjct: 214 IAEKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEP 273

Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
           +YD FVKK V +A+  KVGDP D     GP +      ++   ++  V +G KL  GGK 
Sbjct: 274 VYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY 333

Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
            G+   F +PTV ++VT D +I REE FGPV ++I  K  +E +E ANDT+YGL++ I+T
Sbjct: 334 DGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILT 390

Query: 546 TNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
            ++  A   A  + +G   +           PFGG K SG GRE G+ +++E+TELK +T
Sbjct: 391 NDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  226 bits (577), Expect = 1e-66
 Identities = 100/176 (56%), Positives = 124/176 (70%), Gaps = 3/176 (1%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SRT+V E +YD FV+KA  +A  R VGDPF K V+QGPQ+D+  F K+L YIKSGVE G 
Sbjct: 343 SRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGA 402

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            LE GG R G KGY+I+PTVFSNV DD  IA++EIFGPVQ+I+KFK LDEVI RAN+T+Y
Sbjct: 403 TLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRY 462

Query: 191 GLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG 246
           GLA+G+ T N+DTANT + A+  G+V    F      I  G   G K+   G+ KG
Sbjct: 463 GLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFG---GYKMSGIGREKG 515

Length = 538

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  224 bits (573), Expect = 1e-66
 Identities = 114/244 (46%), Positives = 148/244 (60%), Gaps = 25/244 (10%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAY------------YYCFVCAGSRTYVQ 423
           +A AAA  L   +LELGGKS  +I  DA+ D A               C  CAGSR +VQ
Sbjct: 230 VAIAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVC--CAGSRIFVQ 287

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           E IYD FV K  EK    KVG+P D   Q G QV+ +   K+L+Y+    E+G K+  GG
Sbjct: 288 EGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGG 347

Query: 484 KR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 539
            R      DKG+FIEPT+  NVT+D ++A+EEIFGPV T+IKFKT DEVI+ AND++YGL
Sbjct: 348 HRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGL 407

Query: 540 ASGIVTTNIDTANTFAHAINAGSA------VVPQ-APFGGFKESGIGRELGKAALDEYTE 592
             G+ T +I+ A   A A+  G         +P  APFGG+K+SGIGRE  K+ LD YT+
Sbjct: 408 GGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQ 467

Query: 593 LKTV 596
           +K +
Sbjct: 468 MKNI 471

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  224 bits (573), Expect = 1e-66
 Identities = 96/239 (40%), Positives = 130/239 (54%), Gaps = 18/239 (7%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVD---------MAYYYCFVC-AGSRTYVQEDI 426
           AA     L RV+LELGGKS  ++  DAD+D                VC A +R  V    
Sbjct: 232 AAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSR 291

Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR- 485
           YD  V+      AA KVGDP D + Q GP   A    +V  YI  G  +G +L  GG R 
Sbjct: 292 YDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRP 351

Query: 486 KG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
            G D+G+F+EPT+F++V +D +IA+EEIFGPV ++I +   D+ +  AND+ YGL+  + 
Sbjct: 352 AGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVW 411

Query: 545 TTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T +++     A  I  G+  V        APFGGFK+SGIGRE G   LD Y E K++ 
Sbjct: 412 TADVERGLAVARRIRTGTVGVNGFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  223 bits (571), Expect = 1e-66
 Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 18/243 (7%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGS------RT 420
           T   +MA+AA   LKRV+LELGG    ++  D D+D      ++  F+ +G       R 
Sbjct: 203 TGKKVMASAAK-TLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRL 261

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           YV E IYD F +  V  A A  VGD  D     GP  +   + KV   ++    +G K+ 
Sbjct: 262 YVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVL 321

Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
           AGG+     GYFI PT+  +  +  +I  EE FGPV  ++K+   DEVI RAND++YGL 
Sbjct: 322 AGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLG 381

Query: 541 SGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTEL 593
           + + +++++ A   A  + AG+       A+ P APFGG K+SGIG E G   L EYT+ 
Sbjct: 382 ASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQT 441

Query: 594 KTV 596
           + +
Sbjct: 442 QVI 444

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  223 bits (570), Expect = 3e-66
 Identities = 98/241 (40%), Positives = 134/241 (55%), Gaps = 20/241 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFVCAG------SRTYVQE 424
           IMA AAA  LKRV LELGGKS  ++  DAD+      A   C   AG      +R  V  
Sbjct: 218 IMAQAAA-TLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPR 276

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
             YD  V+       A  VGDP D     GP + A    +V  YI  G ++G +L  GG 
Sbjct: 277 SRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGG 336

Query: 485 R--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           R    DKG+++EPT+F++V +D +IA+EEIFGPV  +I +   DE +  AND+ YGL+ G
Sbjct: 337 RPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGG 396

Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + + ++D A   A  I  GS  +       P APFGG+K+SG+GRE G   L+E+ E K+
Sbjct: 397 VWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKS 456

Query: 596 V 596
           +
Sbjct: 457 I 457

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  222 bits (567), Expect = 9e-66
 Identities = 88/147 (59%), Positives = 114/147 (77%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           VD E F K+L+YI+ G E+G  L  GG R G KGY+I+PT+FS+V DD KIAR+EIFGPV
Sbjct: 328 VDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPV 387

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
           Q+I+KFKT+DEVI+RAN++KYGLA+G+ + NIDTANT + A+ AG+VW+NCY       P
Sbjct: 388 QSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIP 447

Query: 336 FGGFKESGIGRELGKAALDEYTELKTV 362
           FGG+K SGIGRE G  AL+ Y ++K V
Sbjct: 448 FGGYKMSGIGREKGIYALNNYLQVKAV 474

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  219 bits (561), Expect = 5e-65
 Identities = 79/148 (53%), Positives = 104/148 (70%), Gaps = 1/148 (0%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +  +   +VL+YI+   E+G KL  GG+   +KGYF+EPTV ++VT D +IA+EEIFGPV
Sbjct: 312 ISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPV 371

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA- 334
            ++I FK  DE IE ANDT+YGLA+G+ T +++ A   A  + AG VWIN Y    P+A 
Sbjct: 372 LSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMVWINDYTTGDPEAL 431

Query: 335 PFGGFKESGIGRELGKAALDEYTELKTV 362
           PFGGFK+SG GRE GK  L+EYTE KTV
Sbjct: 432 PFGGFKQSGFGREGGKEGLEEYTETKTV 459

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  220 bits (561), Expect = 3e-64
 Identities = 90/153 (58%), Positives = 116/153 (75%), Gaps = 1/153 (0%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +D+E F K+L YIKSGVE G  LE GG R G KGY+I+PTVFSNV DD  IA++EIFGPV
Sbjct: 382 IDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPV 441

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
           Q+I+KFK LDEVI RAN+T+YGLA+G+ T N+DTANT + A+  G+VW+NC+       P
Sbjct: 442 QSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIP 501

Query: 336 FGGFKESGIGRELGKAALDEYTELKTVTESPLR 368
           FGG+K SGIGRE G  +L+ Y ++K V  +PL+
Sbjct: 502 FGGYKMSGIGREKGIYSLNNYLQVKAVV-TPLK 533

Length = 538

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  218 bits (556), Expect = 3e-64
 Identities = 106/280 (37%), Positives = 154/280 (55%), Gaps = 29/280 (10%)

Query: 342 SGIGRELGKAALDEYTELK--TVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVI 399
            G G   G AAL  + ++K   +  S     T  +IM AAA   +K V+LELGGK+ L++
Sbjct: 179 PGDGATAG-AALVRHPDVKRIALIGSV---PTGRAIMRAAAEG-IKHVTLELGGKNALIV 233

Query: 400 CADADVD---------MAYYYCFVCAGS--RTYVQEDIYDTFVKKAVEKAAARKVGDPFD 448
             DAD +         M + +C    GS  R +V E IYD  + + VE+ AA KVGDP D
Sbjct: 234 FPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTD 293

Query: 449 KSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDD 504
            +   GP V  + + +V++YI S   +G +L  GG R      + G+++EPTVF++VT  
Sbjct: 294 PATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPG 353

Query: 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV 564
            +IAREEIFGPV ++++++   E++ +AN  +YGL + I T +I  A+  A  + AG   
Sbjct: 354 MRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVW 413

Query: 565 VPQ-------APFGGFKESGIGRELGKAALDEYTELKTVT 597
           +         APFGG K SGIGRE     L  YT+ K V 
Sbjct: 414 INGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVN 453

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  216 bits (553), Expect = 6e-64
 Identities = 94/244 (38%), Positives = 132/244 (54%), Gaps = 19/244 (7%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYCFVCAG------SRT 420
           T   +  AAA   LKRV LELGGK+P+++  DAD+D A        +  AG       R 
Sbjct: 208 TGKKVARAAAD-TLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRV 266

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           YV E +YD FV   VE  +A +VGDP D+  + GP   A    +V  ++        ++ 
Sbjct: 267 YVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHARVL 325

Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
            GG+R    GYF EPTV + V  D +I +EEIFGPV T+  F   DE IE AND +YGLA
Sbjct: 326 TGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLA 385

Query: 541 SGIVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEYTEL 593
           S + T ++  A   +  ++ G+        +  + P GGFK+SG G++L   AL++YT +
Sbjct: 386 SSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRI 445

Query: 594 KTVT 597
           K V 
Sbjct: 446 KHVM 449

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  215 bits (551), Expect = 8e-64
 Identities = 92/240 (38%), Positives = 125/240 (52%), Gaps = 17/240 (7%)

Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQ 423
             +AA A  NLK+  LELGG  P ++  DAD+D A               C A  R  V 
Sbjct: 188 RAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVH 247

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           ED+YD F++K VE  AA KVGDP D+    GP    ++  ++   ++  V  G  L  GG
Sbjct: 248 EDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGG 307

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           KR    G F  PTV ++VT       EE+FGPV  +IK K  +E I  AND+ +GL   +
Sbjct: 308 KRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSV 367

Query: 544 VTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            TT+++ A   A  + AG   +       P+ PFGG K SG GRELG+  + E+  +KTV
Sbjct: 368 FTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTV 427

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  216 bits (553), Expect = 1e-63
 Identities = 130/381 (34%), Positives = 170/381 (44%), Gaps = 79/381 (20%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M AWK  PALAAG  V+LKPA QTPL+ L +  L      P GV++V+ G+G  +     
Sbjct: 152 MAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAG---- 206

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
                PLA   R               + K A       F  S   G  +   M     N
Sbjct: 207 ----KPLASHPR---------------IAKLA-------FTGSTTVGRLI---MQYAAEN 237

Query: 121 YIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF----SNVTDDFKIAREEIF-------GPV 169
            I   +E GGK                P +F     +  DDF    EE         G V
Sbjct: 238 LIPVTLELGGK---------------SPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEV 282

Query: 170 QT-----IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTK 223
            T     +++    DE IERA +             I   N        G+ V  +   K
Sbjct: 283 CTCPSRALVQESIYDEFIERAVER---------FEAIKVGNPLDPETMMGAQVSKDQLEK 333

Query: 224 VLNYIKSGVEQGGKLEAGGKRK----GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 279
           +L+Y+  G E+G ++  GG+R      DKGYF EPT+     +D +I +EEIFGPV  +I
Sbjct: 334 ILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVI 393

Query: 280 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGF 339
            FK  +E I  ANDT+YGL  G+ T +I+ A   A  I  G VW+NCY      APFGG+
Sbjct: 394 TFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGY 453

Query: 340 KESGIGRELGKAALDEYTELK 360
           K+SGIGRE  K  LD Y + K
Sbjct: 454 KKSGIGRETHKMMLDHYQQTK 474

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  214 bits (548), Expect = 4e-63
 Identities = 112/282 (39%), Positives = 158/282 (56%), Gaps = 31/282 (10%)

Query: 342 SGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA 401
           +G G E G AAL ++ ++  VT +   S     I+  AAA  L  VSLELGGKSP+++  
Sbjct: 180 TGYGEECG-AALVDHPDVDKVTFTG--STEVGKIIYRAAADRLIPVSLELGGKSPMIVFP 236

Query: 402 DADVDMAY-------------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFD 448
           DAD+D A                C   AGSR +V EDIYD F++K V K +  K+GDP D
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSC--TAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLD 294

Query: 449 KSVQQGPQVDAEMFTKVLNYIKSGVE-QGGKLEAGGKRKGD----KGYFIEPTVFSNVTD 503
           ++   G  +  + F KV  YI  G+   G  +  GG   G+     G+F++PT+FS V +
Sbjct: 295 EATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDN 354

Query: 504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI----- 558
           ++++AREEIFGPV   I +K  DEVI  AND+ YGLA+ + T ++  A   AHA+     
Sbjct: 355 EWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWV 414

Query: 559 --NAGSAVVPQAPFGGFKESGIGRELG-KAALDEYTELKTVT 597
             N G    P   +GGFK+SG+GRE   +  L+ +T+ KTV 
Sbjct: 415 QVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score =  212 bits (542), Expect = 5e-62
 Identities = 135/380 (35%), Positives = 193/380 (50%), Gaps = 76/380 (20%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA---- 56
           MLAWK    LAAG  V+LKPA+ TPLTAL  A LT +AGFP GVI++LPG G +      
Sbjct: 163 MLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLS 222

Query: 57  --PYWRKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP---------FDKSVQ 105
             P  RK     L +   T + + I  +     ++K +    G            DK+V+
Sbjct: 223 DHPDVRK-----LGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVR 277

Query: 106 QGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 165
            G  + +V F K  N I +G                   F+E ++     D+F + R   
Sbjct: 278 MG--MSSVFFNKGENCIAAG-----------------RLFVEESIH----DEF-VRR--- 310

Query: 166 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVL 225
              V+ + K K  D  ++R+             T+    N  AH             K++
Sbjct: 311 --VVEEVKKMKIGDP-LDRS-------------TDHGPQNHKAH-----------LDKLV 343

Query: 226 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT-- 283
            Y + GV++G  L  GGK+    G+F EPTVF++V D   IA+EE FGP+  I KF    
Sbjct: 344 EYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGD 403

Query: 284 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESG 343
           +D V++RANDT+YGLASG+ T +I+ A   +  + AG+V++N Y      APFGGFK+SG
Sbjct: 404 VDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSG 463

Query: 344 IGRELGKAALDEYTELKTVT 363
            G++LG+ AL+EY + KTVT
Sbjct: 464 FGKDLGEEALNEYLKTKTVT 483

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  211 bits (539), Expect = 8e-62
 Identities = 101/278 (36%), Positives = 143/278 (51%), Gaps = 29/278 (10%)

Query: 343 GIGRELGKAALDEYTELK--TVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVIC 400
           G+G E G AAL  +  +   + T S     T  ++M AAA  N+  V+LELGGKSP ++ 
Sbjct: 182 GLGAEAG-AALVAHPGVDHISFTGSV---ETGIAVMRAAA-ENVVPVTLELGGKSPQIVF 236

Query: 401 ADADVDMA--------YYYCF-VC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKS 450
           ADAD++ A               C AGSR  V   IYD  +++ VE+  A +VG   +  
Sbjct: 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-D 295

Query: 451 VQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKI 507
              GP + A+   +V  ++     +G ++ AGG+        GYF+ PT+  +V  D ++
Sbjct: 296 PDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRL 355

Query: 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP- 566
           A+EEIFGPV  ++ F    E I  AN T YGL +G+ T + D A   A  + AG   V  
Sbjct: 356 AQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNN 415

Query: 567 -------QAPFGGFKESGIGRELGKAALDEYTELKTVT 597
                  + PFGG K+SG GRE G  AL  YT+ KTV 
Sbjct: 416 YGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  208 bits (532), Expect = 9e-61
 Identities = 72/146 (49%), Positives = 96/146 (65%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V E IYD FV++ VE A + KVGDP D     GP +      +VL+YI+   E+G 
Sbjct: 273 SRLLVHESIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGA 332

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           KL  GG+   +KGYF+EPTV ++VT D +IA+EEIFGPV ++I FK  DE IE ANDT+Y
Sbjct: 333 KLLCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEY 392

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GLA+G+ T +++ A   A  + AG V
Sbjct: 393 GLAAGVFTNDLERALRVARRLEAGMV 418

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  207 bits (530), Expect = 1e-60
 Identities = 88/237 (37%), Positives = 128/237 (54%), Gaps = 21/237 (8%)

Query: 379 AAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGS------RTYVQEDIYD 428
           A  + LK+V+LELG  + +++ ADAD++ A   C    F  AG       R +V EDIYD
Sbjct: 219 ARKAGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYD 278

Query: 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD 488
            F+++ V       VGDP D+    GP +      ++  +++  VE G +L  GGKR G 
Sbjct: 279 EFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA 338

Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI 548
               +EPTV ++V  D K+  EE+F PV ++  F TLDE I  AND+ YGL +G+ T ++
Sbjct: 339 ---ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDL 395

Query: 549 DTANTFAHAINAGSAV--------VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
             A   A  +  G  +        V   P+GG KESG GRE  + A++E TE+K V 
Sbjct: 396 QKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  208 bits (532), Expect = 2e-60
 Identities = 87/146 (59%), Positives = 114/146 (78%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR YVQE IYD FVKK VEKA    VGDPFD   +QGPQVD   F K+L+YI+ G  +G 
Sbjct: 306 SRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGA 365

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            L  GGK  GDKGY+IEPT+F++VT+D KIA++EIFGPV +++KFKT++E I++AN+TKY
Sbjct: 366 TLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKY 425

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GLA+GIVT ++D ANT + +I AG++
Sbjct: 426 GLAAGIVTKDLDVANTVSRSIRAGTI 451

Length = 501

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  208 bits (532), Expect = 2e-60
 Identities = 83/247 (33%), Positives = 122/247 (49%), Gaps = 24/247 (9%)

Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYY-YCFVCAG---------SRTYVQ 423
             +    A    RV LELGG + +++  DAD+D+A     F   G          R  V 
Sbjct: 229 RRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVH 288

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           E +YD F+++ V+     ++GDP D+    GP ++     K LN I+    QGG +  GG
Sbjct: 289 ESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGG 348

Query: 484 KR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
           KR   G+ G ++EPT+ + VTDD +I +EE F P+  +IKF +L+E I   ND   GL+S
Sbjct: 349 KRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSS 408

Query: 542 GIVTTNIDTANTFAHA---------INAGS--AVVPQAPFGGFKESGIGRELGKAALDEY 590
            I T ++  A  +            +N  +  A +    FGG KE+G GRE G  A  +Y
Sbjct: 409 SIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEI-GGAFGGEKETGGGRESGSDAWKQY 467

Query: 591 TELKTVT 597
               T T
Sbjct: 468 MRRSTCT 474

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  205 bits (524), Expect = 7e-60
 Identities = 79/151 (52%), Positives = 100/151 (66%), Gaps = 2/151 (1%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGP 274
           + A    +VL YI+    +G KL  GGKR +G KGYF+ PTV ++V  D  IA+EEIFGP
Sbjct: 282 ISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGP 341

Query: 275 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQ 333
           V  +I FK  +E IE ANDT+YGLA+G+ T +++ A   A  + AG+VWIN Y     P 
Sbjct: 342 VLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPS 401

Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVTE 364
           APFGG K+SGIGRE G   L+EYTE KTVT 
Sbjct: 402 APFGGVKQSGIGREGGPYGLEEYTEPKTVTI 432

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  206 bits (527), Expect = 1e-59
 Identities = 99/249 (39%), Positives = 141/249 (56%), Gaps = 19/249 (7%)

Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCF-----VC-AGS 418
           S  +   +  AAA  +K VSLELGGKSP+++  D D+D A     + CF     +C A S
Sbjct: 239 STATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATS 298

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
           R  V E I   F++K V+ A   K+ DP ++  + GP V    + KVL +I +   +G  
Sbjct: 299 RLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGAT 358

Query: 479 LEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
           +  GGKR     KG+FIEPT+ ++VT   +I REE+FGPV  +  F T DE IE AND+ 
Sbjct: 359 ILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSH 418

Query: 537 YGLASGIVTTNIDTANTFAHAINAGSAVV----P---QAPFGGFKESGIGRELGKAALDE 589
           YGLA  +++ +++     + A  AG   +    P   QAP+GG K SG GRELG+  L+ 
Sbjct: 419 YGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLEN 478

Query: 590 YTELKTVTE 598
           Y  +K VT+
Sbjct: 479 YLSVKQVTK 487

Length = 503

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  206 bits (525), Expect = 1e-59
 Identities = 112/279 (40%), Positives = 156/279 (55%), Gaps = 29/279 (10%)

Query: 343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
           G G E GKA L  + ++K V+ +   + T   IM   A + LKR S+ELGGKSP+++  D
Sbjct: 200 GFGEEAGKA-LVAHPDVKAVSFTG-ETATGSIIMRNGADT-LKRFSMELGGKSPVIVFDD 256

Query: 403 ADVDMAY------YYCF----VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQ 452
           AD++ A        + F      A SR  VQE I + FV+K VE+  A +VG P D   +
Sbjct: 257 ADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316

Query: 453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-------KGYFIEPTVFSNVTDDF 505
            GP +  E   KVL Y+++  ++G  +  GG+R          +G ++ PTVF+   +  
Sbjct: 317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHM 376

Query: 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV 565
           +IA+EEIFGPV T+I FK  +E IE+ANDT+YGLA  + T ++  A+  A A+ AG   V
Sbjct: 377 RIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWV 436

Query: 566 --------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
                   P  PFGG K SGIGRE G  + D YTE K V
Sbjct: 437 NSQNVRHLPT-PFGGVKASGIGREGGTYSFDFYTETKNV 474

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  203 bits (518), Expect = 7e-59
 Identities = 95/239 (39%), Positives = 133/239 (55%), Gaps = 20/239 (8%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----------FVCAGSRTYVQED 425
           +A+ A    K+V+LELGG  P+++  DAD++ A                 A  R  V+E+
Sbjct: 218 IASKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEE 277

Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
           +YD F+K  VEK    KVGDP D+S   GP +  E   ++ N +   VE+GGK+  GGKR
Sbjct: 278 VYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKR 337

Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
             D+G F  PTV  N T D  + +EE+FGPV  I K K  +E +E AN T+YGL + + T
Sbjct: 338 --DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFT 395

Query: 546 TNIDTANTFAHAINAGSAVVPQA--------PFGGFKESGIGRELGKAALDEYTELKTV 596
            +I+ A   A  + AG  V+  +        PFGGFK+SGIGRE  +  + E TE KT+
Sbjct: 396 NDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTI 454

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  202 bits (515), Expect = 2e-58
 Identities = 104/261 (39%), Positives = 141/261 (54%), Gaps = 28/261 (10%)

Query: 360 KTVTESPLRSYTSHS-------IMAAAAASNLKRVSLELGGKSPLVICADADVD------ 406
             +T SPL    S +       I+   +AS +K+VS+ELGG +P ++  DAD+D      
Sbjct: 190 NVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDADLDQAVEGA 249

Query: 407 MAYYY------CFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAE 460
           MA  +      C VCA +R YV + IYD F KK  E     KVG+  D+ V QGP ++ +
Sbjct: 250 MASKFRNAGQTC-VCA-NRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEK 307

Query: 461 MFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 520
              KV  +I   VE+G K+  GGKR    G F EPTV SNVT D  +++EE FGP+  + 
Sbjct: 308 AVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVF 367

Query: 521 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHA-------INAGSAVVPQAPFGGF 573
           KF   +EVI  ANDT+ GLA+   + ++      A A       IN G      APFGG 
Sbjct: 368 KFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVVAPFGGV 427

Query: 574 KESGIGRELGKAALDEYTELK 594
           K+SG+GRE  K  ++EY E K
Sbjct: 428 KQSGLGREGSKYGIEEYLETK 448

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  202 bits (516), Expect = 3e-58
 Identities = 125/393 (31%), Positives = 173/393 (44%), Gaps = 107/393 (27%)

Query: 3   AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKS 62
           AWK  PALA G  V+ KPAE TP +A  +  + ++AG P GV +++ G G          
Sbjct: 153 AWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSG---------- 202

Query: 63  CLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---KVL 119
                                           +VG     ++ + P VDAV FT    V 
Sbjct: 203 -------------------------------SEVGQ----ALVEHPDVDAVSFTGSTAVG 227

Query: 120 NYIKSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTD--DFKIAREEI----FGP-- 168
             I +     G    LE GGK          P V   V D  D  +A E      F    
Sbjct: 228 RRIAAAAAARGARVQLEMGGK---------NPLV---VLDDADLDLAVECAVQGAFFSTG 275

Query: 169 ----------VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS--- 215
                     V   I  + ++ ++ER    K G                  A++ G    
Sbjct: 276 QRCTASSRLIVTEGIHDRFVEALVERTKALKVG-----------------DALDEGVDIG 318

Query: 216 --VDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEI 271
             V      K L YI+    +G KL  GG+R  + D+GY++ P +F+ VT+D +IAREEI
Sbjct: 319 PVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEI 378

Query: 272 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-V 330
           FGPV  +I+ +  DE +  ANDT++GL++GIVTT++  A  F   + AG V +N   A V
Sbjct: 379 FGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGV 438

Query: 331 VPQAPFGGFKESGIG-RELGKAALDEYTELKTV 362
               PFGG K S  G RE G+AAL+ YT +KTV
Sbjct: 439 DYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  202 bits (516), Expect = 3e-58
 Identities = 114/278 (41%), Positives = 158/278 (56%), Gaps = 26/278 (9%)

Query: 343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
           G G E+G+A L E+ ++  V  S   S      +    A   KRV+LE+GGK+P+++  D
Sbjct: 200 GRGEEVGEA-LVEHPDVDVV--SFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDD 256

Query: 403 ADVDMAY----YYCFVCAG------SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQ 452
           AD+D+A     +  F   G      SR  V E +YD F+K+ VE+A   +VGD  D+   
Sbjct: 257 ADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316

Query: 453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIA 508
            GP ++     KVLNY + G E+G  L  GG+R      +KGYF+EPTVF++VT D +IA
Sbjct: 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIA 376

Query: 509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--- 565
           +EEIFGPV  +I+  +L+E IE ANDT+YGL+S I T +++ A      + AG   V   
Sbjct: 377 QEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAP 436

Query: 566 -----PQAPFGGFKESGIG-RELGKAALDEYTELKTVT 597
                   PFGG K+SG G RE G  ALD +TE K V 
Sbjct: 437 TIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVY 474

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  201 bits (513), Expect = 1e-57
 Identities = 84/153 (54%), Positives = 119/153 (77%), Gaps = 1/153 (0%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           VD + F K+L+YI+ G  +G  L  GGK  GDKGY+IEPT+F++VT+D KIA++EIFGPV
Sbjct: 345 VDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPV 404

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
            +++KFKT++E I++AN+TKYGLA+GIVT ++D ANT + +I AG++W+NCY A  P  P
Sbjct: 405 MSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCP 464

Query: 336 FGGFKESGIGRELGKAALDEYTELKTVTESPLR 368
           FGG+K SG GR+ G  ALD+Y ++K+V  +PL 
Sbjct: 465 FGGYKMSGFGRDQGMDALDKYLQVKSVV-TPLY 496

Length = 501

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  199 bits (508), Expect = 3e-57
 Identities = 130/375 (34%), Positives = 188/375 (50%), Gaps = 68/375 (18%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M AWK  PALAAG  V++KP+  T L+ L +A + Q    P GV++++ G G  S  Y  
Sbjct: 152 MAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLL 210

Query: 61  K-SCLSPLAYRSRTYVQEDIYDTFVKKAVE-------KAAARKVGD-PFDKSVQQGPQVD 111
               L  LA+   T V  D+     KK +        K+A     D  +DK+++ G Q+ 
Sbjct: 211 NHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDDANWDKALE-GAQL- 268

Query: 112 AVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT 171
            ++F            QG    AG +                           IF  VQ 
Sbjct: 269 GILFN-----------QGQVCCAGSR---------------------------IF--VQE 288

Query: 172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSG 231
            I  + + ++ E+  + K G         +D        +N   +D     K+L+Y+   
Sbjct: 289 GIYDEFVAKLKEKFENVKVGNP-------LDPDTQMGAQVNKDQLD-----KILSYVDIA 336

Query: 232 VEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
            E+G K+  GG R      DKG+FIEPT+  NVT+D ++A+EEIFGPV T+IKFKT DEV
Sbjct: 337 KEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEV 396

Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRE 347
           I+ AND++YGL  G+ T +I+ A   A A+  G VW+N Y  +   APFGG+K+SGIGRE
Sbjct: 397 IDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRE 456

Query: 348 LGKAALDEYTELKTV 362
             K+ LD YT++K +
Sbjct: 457 THKSMLDAYTQMKNI 471

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  198 bits (505), Expect = 5e-57
 Identities = 89/246 (36%), Positives = 121/246 (49%), Gaps = 20/246 (8%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGS------RT 420
           T   +MAAAA   L  V LELGGK P+++ ADAD++ A     +   V AG       R 
Sbjct: 208 TGRKVMAAAAE-RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERV 266

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           YV E +YD FV + V KA A + G         GP   A     V  ++   V +G K  
Sbjct: 267 YVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKAL 326

Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
            GG R    G F EPTV ++V  D  + REE FGPV  ++     DE I  AND++YGL+
Sbjct: 327 TGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLS 386

Query: 541 SGIVTTNIDTANTFAHAINAG---------SAVVPQAPFGGFKESGIGRELGKAALDEYT 591
           + + + ++  A   A  + AG         +A +P  PFGG K+SG GR  G   L E+ 
Sbjct: 387 ASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFC 446

Query: 592 ELKTVT 597
             K + 
Sbjct: 447 RPKAIA 452

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  199 bits (507), Expect = 7e-57
 Identities = 100/240 (41%), Positives = 138/240 (57%), Gaps = 21/240 (8%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYVQ 423
           + A AA+ +KRVSLELGG +P ++  DAD+D      +A  +      C VCA +R  VQ
Sbjct: 255 LMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTC-VCA-NRILVQ 312

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           E IYD F +   +      VGD F++ V QGP ++     KV ++++  V +G K+  GG
Sbjct: 313 EGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGG 372

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           KR    G F EPTV  +VT+D  I REE+FGPV  + +FKT +E I  ANDT+ GLA+ I
Sbjct: 373 KRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYI 432

Query: 544 VTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            T ++  A   + A       +N G      APFGG K+SG+GRE  K  +DEY E+K V
Sbjct: 433 FTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492

Length = 498

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  198 bits (505), Expect = 7e-57
 Identities = 97/239 (40%), Positives = 139/239 (58%), Gaps = 21/239 (8%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQEDI 426
              A  +LK+V+LELGG +P V+  DAD+D A          +   +C A +R  V ED+
Sbjct: 227 GELAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDV 286

Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
           YD FV+K VE+  A   GDP D     GP ++      +L+ I+  VE+G  L  GG+ +
Sbjct: 287 YDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAE 346

Query: 487 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT 546
           G+    +EPTV S+VT+D +IAREEIFGPV  IIK    +E +E ANDT+YGL+  + T+
Sbjct: 347 GN---VLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTS 403

Query: 547 NIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           +++    FA  I+AG   +        P  PFGG K SG+GR  G+ AL+E+T  K ++
Sbjct: 404 DLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWIS 462

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  197 bits (504), Expect = 3e-56
 Identities = 102/287 (35%), Positives = 144/287 (50%), Gaps = 38/287 (13%)

Query: 343 GIGRELGKAALDE-YTELKTVTESPLRSYTSHSIMAAAA-----ASNLKRVSLELGGKSP 396
           G G E+G   ++         T S         I   AA        LKRV  E+GGK+ 
Sbjct: 231 GPGEEVGDYLVEHPDVRFIAFTGS---REVGLRIYERAAKVQPGQKWLKRVIAEMGGKNA 287

Query: 397 LVICADADVDMA----YYYCF-----VC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDP 446
           +++  DAD+D A        F      C A SR  V E +YD F+++ VE+  A KVGDP
Sbjct: 288 IIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDP 347

Query: 447 FDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDD 504
            D  V  GP +D     ++  YI+ G +  G+L  GG+      +GYF++PT+F++V  D
Sbjct: 348 EDPEVYMGPVIDKGARDRIRRYIEIG-KSEGRLLLGGEVLELAAEGYFVQPTIFADVPPD 406

Query: 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG--- 561
            ++A+EEIFGPV  +IK K  DE +E ANDT+YGL  G+ + + +           G   
Sbjct: 407 HRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLY 466

Query: 562 ------SAVVPQAPFGGFKESGIGRELGKAA----LDEYTELKTVTE 598
                  A+V + PFGGFK SG G    KA     L ++ + KTVTE
Sbjct: 467 ANRKITGALVGRQPFGGFKMSGTG---SKAGGPDYLLQFMQPKTVTE 510

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  193 bits (494), Expect = 1e-55
 Identities = 71/147 (48%), Positives = 94/147 (63%), Gaps = 1/147 (0%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V E IYD FV++ VE+  A KVG+P D     GP + A    +VL YI+    +G 
Sbjct: 243 SRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGA 302

Query: 131 KLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
           KL  GGKR +G KGYF+ PTV ++V  D  IA+EEIFGPV  +I FK  +E IE ANDT+
Sbjct: 303 KLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTE 362

Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
           YGLA+G+ T +++ A   A  + AG+V
Sbjct: 363 YGLAAGVFTRDLERALRVAERLEAGTV 389

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  189 bits (483), Expect = 3e-54
 Identities = 87/240 (36%), Positives = 127/240 (52%), Gaps = 19/240 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQE 424
           IMAAAA  N+ +V LELGGK+P ++  DAD+D+A              VC    R YVQ+
Sbjct: 166 IMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQK 224

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKS-VQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
            IYD FV +  E   A + G+P +++ +  GP ++A    +V   +   VE+G ++  GG
Sbjct: 225 GIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGG 284

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           K    KGY+  PT+  +V  +  I  EE FGPV  ++ F TL+E I  AND+ YGL S I
Sbjct: 285 KAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSI 344

Query: 544 VTTNIDTANTFAHAINAGSAVVPQAPF-------GGFKESGIGRELGKAALDEYTELKTV 596
            T N++ A      +  G   + +  F        G+++SGIG   GK  L EY + + V
Sbjct: 345 YTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 404

Length = 409

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  190 bits (486), Expect = 4e-54
 Identities = 70/144 (48%), Positives = 100/144 (69%), Gaps = 4/144 (2%)

Query: 223 KVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
           KV  Y+    E+G ++  GG+R        GYF EPT+ ++VT+D +IA+EE+FGPV ++
Sbjct: 312 KVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSV 371

Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGG 338
           I F   +E I  AND++YGLA+GI T ++  A+  A AI AG+VW+N Y+A+ P +PFGG
Sbjct: 372 IPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGG 431

Query: 339 FKESGIGRELGKAALDEYTELKTV 362
           FK+SGIGRE G  A+ EYT+ K+V
Sbjct: 432 FKDSGIGRENGIEAIREYTQTKSV 455

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  192 bits (489), Expect = 5e-54
 Identities = 92/246 (37%), Positives = 125/246 (50%), Gaps = 21/246 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYY----YCFVCAGS------RTYVQE 424
           ++A  A   L   SLELGGK+P+++  DAD+D A       CF  AG       R YV E
Sbjct: 246 VLAEQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHE 305

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD FV+  V    A ++G  +D S   G  +       V  ++   V +G  + AGGK
Sbjct: 306 SIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGK 365

Query: 485 RKGDKG-YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
            + D G  F EPTV + VT D ++AREE FGPV ++     +DE +ERANDT YGL + +
Sbjct: 366 ARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASV 425

Query: 544 VTTNIDTANTFAHAINAGSAVVP----------QAPFGGFKESGIGRELGKAALDEYTEL 593
            T +       A  I AG+  V            AP GG K+SG+GR  G   L +YTE 
Sbjct: 426 WTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTES 485

Query: 594 KTVTES 599
           +T+   
Sbjct: 486 QTIATQ 491

Length = 524

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  188 bits (481), Expect = 9e-54
 Identities = 91/245 (37%), Positives = 122/245 (49%), Gaps = 28/245 (11%)

Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGS------------RTY 421
            I+A  AA +LK V LELGGK+P ++  DAD+D A        G+            R  
Sbjct: 194 RIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAA--LFGAFLNSGQICMSTERII 251

Query: 422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
           V E I D FV+K   KAAA K+   F   V  G  V A    +V   +   + +G KL  
Sbjct: 252 VHESIADEFVEKL--KAAAEKL---FAGPVVLGSLVSAAAADRVKELVDDALSKGAKLVV 306

Query: 482 GGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
           GG   +   G  + PT+  NVT D  I  EE FGPV +II+ K  +E +  AND++YGL+
Sbjct: 307 GGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLS 366

Query: 541 SGIVTTNIDTANTFAHAINAG-----SAVV---PQAPFGGFKESGIGRELGKAALDEYTE 592
           + + T ++  A   A  I +G        V   P  P GG K SG GR  GK  +DE+TE
Sbjct: 367 AAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTE 426

Query: 593 LKTVT 597
            K +T
Sbjct: 427 TKWIT 431

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  189 bits (483), Expect = 2e-53
 Identities = 69/144 (47%), Positives = 94/144 (65%), Gaps = 4/144 (2%)

Query: 223 KVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
           KVL YI+ G  +G +L  GG+R        G F+ PTVF++ TDD  I REEIFGPV ++
Sbjct: 334 KVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSV 393

Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGG 338
           + F   DEVI RANDT+YGLA+G+ T ++  A+   H + AG  WIN +     + P GG
Sbjct: 394 LTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGG 453

Query: 339 FKESGIGRELGKAALDEYTELKTV 362
           +K+SGIGRE G A L+ YT++K+V
Sbjct: 454 YKQSGIGRENGIATLEHYTQIKSV 477

Length = 488

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  187 bits (476), Expect = 7e-53
 Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 19/200 (9%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
           VQ  IK +  + ++ER    + G             +        G+ +  E   KVL Y
Sbjct: 266 VQRSIKDEFTERLVERTKKIRIG-------------DPLDEDTQMGALISEEHLEKVLGY 312

Query: 228 IKSGVEQGGKLEAGGKR-----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 282
           I+S  ++G K+  GG+R       + G+++ P V ++ TDD  I REEIFGPV +I+ F 
Sbjct: 313 IESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFD 372

Query: 283 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKES 342
           T +EVI RANDT YGLA+G+ T ++  A+     + AG+ WIN Y     + PFGG+K+S
Sbjct: 373 TEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQS 432

Query: 343 GIGRELGKAALDEYTELKTV 362
           G GRE G AAL+ YT+LKTV
Sbjct: 433 GFGRENGTAALEHYTQLKTV 452

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  186 bits (474), Expect = 1e-52
 Identities = 72/147 (48%), Positives = 107/147 (72%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           V    F +VL+Y+  G E+G +L  GGKR G +G+F+EPT+F+ V  + +IA+EEIFGPV
Sbjct: 303 VSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPV 362

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
            ++++F+  +E +  AN T+YGLA+G+ T ++  A+  A A+ AG+VWIN Y    P +P
Sbjct: 363 VSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSP 422

Query: 336 FGGFKESGIGRELGKAALDEYTELKTV 362
           FGG+K+SG GRE+G+ ALDEYTE+K+V
Sbjct: 423 FGGYKQSGFGREMGREALDEYTEVKSV 449

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  186 bits (474), Expect = 1e-52
 Identities = 85/242 (35%), Positives = 119/242 (49%), Gaps = 22/242 (9%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQE 424
            +  AA  +LK+VSLELGGK+ L++  DAD+D+A          +   +C A  R  V E
Sbjct: 204 KVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHE 263

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            + D +  K   KA    VGDP    V  GP ++A    +V   +   V  G +LEAGG 
Sbjct: 264 SVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGT 323

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
             G    F  PTV S V        EEIFGPV  +  F + +E +  ANDT+YGL++GI+
Sbjct: 324 YDG---LFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGII 380

Query: 545 TTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAA-LDEYTELKT 595
           + ++  A   A  +  G   +        P  PFGG   SG G   G  A  +E+T+ + 
Sbjct: 381 SRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQW 440

Query: 596 VT 597
           VT
Sbjct: 441 VT 442

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  187 bits (476), Expect = 1e-52
 Identities = 82/246 (33%), Positives = 128/246 (52%), Gaps = 23/246 (9%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD-------MAYYY-----CFVCAGS 418
           T   +++AAA S +KR  LELGGK+P+++  DAD+D          YY     C   A  
Sbjct: 228 TGKHVLSAAADS-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDC--TAAC 284

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQG-G 477
           R Y Q  IYD  V K     A  KVGDP D+  + GP + A    +V  +++     G  
Sbjct: 285 RIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHI 344

Query: 478 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
           ++  GG+    KGY+ EPT+ +    D +I + E+FGPV ++  F   D+ +  AND+ Y
Sbjct: 345 RVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDY 404

Query: 538 GLASGIVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEY 590
           GLAS + T ++  A+  +  +  G         +V + P GG K+SG G+++    L++Y
Sbjct: 405 GLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDY 464

Query: 591 TELKTV 596
           T ++ V
Sbjct: 465 TVVRHV 470

Length = 475

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  185 bits (473), Expect = 2e-52
 Identities = 77/153 (50%), Positives = 94/153 (61%), Gaps = 5/153 (3%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           IN  +V+     KV   ++  V +G K+  GGKR G  GYF EPTV ++VTDD  I  EE
Sbjct: 303 INERAVE-----KVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEE 357

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
            FGPV  II F T DEVI RANDT YGLA+ + T ++  A   A A+ AG V IN     
Sbjct: 358 TFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLIS 417

Query: 331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
             +APFGG KESG+GRE GK  L+EY E K V+
Sbjct: 418 DAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  184 bits (470), Expect = 6e-52
 Identities = 89/245 (36%), Positives = 125/245 (51%), Gaps = 21/245 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDM----AYYYCFVCAGS------RTYVQE 424
           ++A  A   L   SLELGGK+P+++  DAD+D     A   CF  AG       R YV E
Sbjct: 210 VVAERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHE 269

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            +YD FV++ V +  A ++G   D     G  +      +V  ++   V +G  + AGG+
Sbjct: 270 SVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR 329

Query: 485 RKGDKG-YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
            + D G YF EPTV + VT+D ++  EE FGPV +I +    DE IE ANDT YGL + +
Sbjct: 330 ARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASV 389

Query: 544 VTTNIDTANTFAHAINAGSAVVP----------QAPFGGFKESGIGRELGKAALDEYTEL 593
            T +       A  + AG+  V            AP GG K+SG+GR  G   L +YTE 
Sbjct: 390 WTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTET 449

Query: 594 KTVTE 598
           +TV  
Sbjct: 450 QTVAV 454

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  183 bits (468), Expect = 9e-52
 Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 27/259 (10%)

Query: 354 DEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----- 408
           DE  +L + T SP   +    + A A     K+V LELGG + +++ +DAD+D A     
Sbjct: 199 DERIKLLSFTGSPAVGW---DLKARAGK---KKVVLELGGNAAVIVDSDADLDFAAQRII 252

Query: 409 ---YYYCF-VCAG-SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFT 463
              +Y     C    R  V   +YD F  + V +  A K GDP D +   GP +      
Sbjct: 253 FGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAE 312

Query: 464 KVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 523
           +V  ++   V+ G KL  GGKR G     +EPT+  +V  D ++  EE+FGPV T+  + 
Sbjct: 313 RVEGWVNEAVDAGAKLLTGGKRDGA---LLEPTILEDVPPDMEVNCEEVFGPVVTVEPYD 369

Query: 524 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---VP-----QAPFGGFKE 575
             DE +   ND+K+GL +G+ T +++ A      +  G  V   VP       P+GG K+
Sbjct: 370 DFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKD 429

Query: 576 SGIGRELGKAALDEYTELK 594
           SGIGRE  + A++E TE +
Sbjct: 430 SGIGREGVRYAIEEMTEPR 448

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  184 bits (469), Expect = 1e-51
 Identities = 94/250 (37%), Positives = 131/250 (52%), Gaps = 23/250 (9%)

Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCF-----VCAGS- 418
           + T  +IM AAA   +K VS ELGGK+  ++ AD D D A        F     VC G+ 
Sbjct: 229 TRTGSAIMKAAA-DGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTE 287

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
           R YV+  I+D FV     +A + K+G P D +   GP + AE   KVL+Y    VE+G  
Sbjct: 288 RVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT 347

Query: 479 LEAGG-----KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 533
           +  GG           G +++PT+++ + D  ++  EEIFGP   I  F + +EVI  AN
Sbjct: 348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALAN 407

Query: 534 DTKYGLASGIVTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIGRELGKAA 586
           DT YGLA+ + T ++  A+  A  +  G   V        + PFGG K SGIGRE G  +
Sbjct: 408 DTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHS 467

Query: 587 LDEYTELKTV 596
           L+ YTEL  V
Sbjct: 468 LEFYTELTNV 477

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  183 bits (466), Expect = 2e-51
 Identities = 74/149 (49%), Positives = 103/149 (69%), Gaps = 1/149 (0%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGP 274
           ++     K+ +Y+ +G  +G  L  GG+R     G F +PT+F++VT D  IAREEIFGP
Sbjct: 305 INEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGP 364

Query: 275 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA 334
           V +++ F T+DE I  ANDT YGL++G+ + +IDTA T A  I AG+VW+N +    P+ 
Sbjct: 365 VLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPEL 424

Query: 335 PFGGFKESGIGRELGKAALDEYTELKTVT 363
           PFGGFK+SGIGRELG+  ++EYTELKTV 
Sbjct: 425 PFGGFKQSGIGRELGRYGVEEYTELKTVH 453

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  182 bits (465), Expect = 4e-51
 Identities = 70/151 (46%), Positives = 97/151 (64%), Gaps = 4/151 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFKIAREEIF 272
             A  F +V  YI+ G+E+G +L AGG  +    ++GYF++PTVF++VT D  IAREEIF
Sbjct: 316 ASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIF 375

Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
           GPV +II +   DE I  ANDT YGLA  + + + + A   A  + AG V IN   A  P
Sbjct: 376 GPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHIN-GAAFNP 434

Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTVT 363
            APFGG+K+SG GRE G+  L+E+ E+K++ 
Sbjct: 435 GAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  182 bits (464), Expect = 5e-51
 Identities = 71/155 (45%), Positives = 91/155 (58%), Gaps = 4/155 (2%)

Query: 62  SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
           +C+      +R YV E IYD FV+K VE+    KVG+  D+    GP ++     KV   
Sbjct: 259 TCVCA----NRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEAL 314

Query: 122 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 181
           ++  V +G K+  GGKR G  GYF EPTV ++VTDD  I  EE FGPV  II F T DEV
Sbjct: 315 VEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEV 374

Query: 182 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           I RANDT YGLA+ + T ++  A   A A+ AG V
Sbjct: 375 IARANDTPYGLAAYVFTRDLARAWRVAEALEAGMV 409

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  180 bits (459), Expect = 2e-50
 Identities = 66/145 (45%), Positives = 92/145 (63%), Gaps = 4/145 (2%)

Query: 223 KVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
           KVL Y++    +G  +  GG R      + GYF+EPTV + + +D ++A+EEIFGPV T+
Sbjct: 310 KVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTV 369

Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGG 338
           I F   +E IE ANDT YGLA+ + T ++  A+  A  + AG+VW+NC+     + PFGG
Sbjct: 370 IPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGG 429

Query: 339 FKESGIGRELGKAALDEYTELKTVT 363
            K SGIGRE G  +L+ YTELK V 
Sbjct: 430 VKASGIGREGGDYSLEFYTELKNVC 454

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  179 bits (455), Expect = 9e-50
 Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 17/240 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VCAGS-RTYVQE 424
            +   AAS+L RV+LELGGK+      DAD+D                VCA   R YV  
Sbjct: 235 KIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHR 294

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
             +D  V K  +  ++ +VG P D+SV  GP  +   F KV +Y+     +G ++  GG+
Sbjct: 295 SKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGE 354

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
               +GYF++PT+    + D ++ REE FGPV + + ++  +E+I+  NDT +GL + + 
Sbjct: 355 ALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVW 414

Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T N+  A  +   I AG+  V       P  PFGG K+SGIGRE G A +D+YTELK+V 
Sbjct: 415 TNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVM 474

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  177 bits (452), Expect = 2e-49
 Identities = 89/249 (35%), Positives = 126/249 (50%), Gaps = 25/249 (10%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD------------MAYYYCFVCAGS 418
           T  +IMAAAA   LKR+ LELGGK+P ++  DAD+D             A  +C   AGS
Sbjct: 209 TGRAIMAAAA-PTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCM--AGS 265

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
           R  VQ  I D    +   + AA KVG   D +   GP +D     +V   ++  +  G +
Sbjct: 266 RVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAE 325

Query: 479 -LEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535
            +  GG       KG F+ PT+      D  I +EEIFGPV T+  F    E +  ANDT
Sbjct: 326 VVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDT 385

Query: 536 KYGLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALD 588
            YGLA+ + T ++  A   A AI AG+        +  +A  GG+++SG+GR  G AAL+
Sbjct: 386 DYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALE 445

Query: 589 EYTELKTVT 597
           ++ E K + 
Sbjct: 446 DFIEYKHIY 454

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  177 bits (451), Expect = 3e-49
 Identities = 112/366 (30%), Positives = 179/366 (48%), Gaps = 51/366 (13%)

Query: 1   MLA-WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW 59
           M+A WK G ALA GC +++KP+E TPLT L VA L ++AG PDGV++V+ G G + A   
Sbjct: 157 MIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGA--- 213

Query: 60  RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVL 119
                                     + +      KV   F  SV  G ++         
Sbjct: 214 --------------------------QLISHPDVAKVS--FTGSVATGKKIGR---QAAS 242

Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI--AREEIFGPVQTIIKFKT 177
           +  +  +E GGK  A   +  D  + +E  + +      ++  A E  +      +    
Sbjct: 243 DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFY------VHRSK 296

Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
            DE++ +    K  L+S  V + +D +  F    N        F KV +Y+     +G +
Sbjct: 297 FDELVTK---LKQALSSFQVGSPMDESVMFGPLANQPH-----FDKVCSYLDDARAEGDE 348

Query: 238 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 297
           +  GG+    +GYF++PT+    + D ++ REE FGPV + + ++  +E+I+  NDT +G
Sbjct: 349 IVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFG 408

Query: 298 LASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYT 357
           L + + T N+  A  +   I AG+VW+N +  + P  PFGG K+SGIGRE G A +D+YT
Sbjct: 409 LTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYT 468

Query: 358 ELKTVT 363
           ELK+V 
Sbjct: 469 ELKSVM 474

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  177 bits (451), Expect = 3e-49
 Identities = 100/274 (36%), Positives = 141/274 (51%), Gaps = 28/274 (10%)

Query: 343 GIGRELGKA-ALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA 401
           G    LG A A DE   + + T S   +    ++ A A     KR++LELGG +P+++  
Sbjct: 188 GEREVLGDAFAADERVAMLSFTGS---AAVGEALRANAG---GKRIALELGGNAPVIVDR 241

Query: 402 DADVDMA---------YYYCFVCAG-SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSV 451
           DAD+D A         Y+   VC    R YV E++YD F++  V      KVGDP D+  
Sbjct: 242 DADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDT 301

Query: 452 QQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 511
             GP +  E   +V  +++  VE G +L  GG+R G      +PTV  +V  D K++ EE
Sbjct: 302 DVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGA---LFKPTVLEDVPRDTKLSTEE 358

Query: 512 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------ 565
            FGPV  II++   +E I  AN T YGL +GI T +++ A   A  +  G  +V      
Sbjct: 359 TFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAF 418

Query: 566 --PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
                PFGG KESG+GRE    A++E TE KTV 
Sbjct: 419 RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  178 bits (455), Expect = 3e-49
 Identities = 90/238 (37%), Positives = 128/238 (53%), Gaps = 28/238 (11%)

Query: 384 LKRVSLELGGKSPLVICADADVDMAYYYCFV---------C-AGSRTYVQEDIYDTFVKK 433
           LKRV  E+GGK  +V+  DAD+D+A               C A SR  V ED+YD  ++K
Sbjct: 280 LKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEK 339

Query: 434 AVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
            VE      VG+P D +   GP ++   F K+++YI+ G ++ G+L  GG+    KGYFI
Sbjct: 340 VVELTKELTVGNPEDNAYM-GPVINQASFDKIMSYIEIG-KEEGRLVLGGEGDDSKGYFI 397

Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN---IDT 550
           +PT+F++V    +I +EEIFGPV   IK K  D  +E AN+T+YGL   +++ N   ++ 
Sbjct: 398 QPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEK 457

Query: 551 ANTFAHA----INAG--SAVVPQAPFGGFKESGIGRELGKAALDEY----TELKTVTE 598
           A    H      N G   A+V   PFGGF  SG      KA   +Y     + KTV+E
Sbjct: 458 ARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTD---SKAGGPDYLLLFLQAKTVSE 512

Length = 514

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  176 bits (448), Expect = 6e-49
 Identities = 64/150 (42%), Positives = 91/150 (60%), Gaps = 4/150 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  VQ  IYD F+++ VE+A A KVGDP D   + GP +      KVL Y++    +G 
Sbjct: 264 SRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGA 323

Query: 131 KLEAGGKRKG----DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
            +  GG R      + GYF+EPTV + + +D ++A+EEIFGPV T+I F   +E IE AN
Sbjct: 324 TILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELAN 383

Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           DT YGLA+ + T ++  A+  A  + AG+V
Sbjct: 384 DTPYGLAAYVWTRDLGRAHRVARRLEAGTV 413

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  175 bits (446), Expect = 1e-48
 Identities = 66/150 (44%), Positives = 92/150 (61%), Gaps = 4/150 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  VQ  IYD FV++ V +A A +VGDP D   Q GP        KV  Y+    E+G 
Sbjct: 266 SRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGA 325

Query: 131 KLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
           ++  GG+R        GYF EPT+ ++VT+D +IA+EE+FGPV ++I F   +E I  AN
Sbjct: 326 RVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALAN 385

Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           D++YGLA+GI T ++  A+  A AI AG+V
Sbjct: 386 DSEYGLAAGIWTRDLARAHRVARAIEAGTV 415

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  175 bits (447), Expect = 2e-48
 Identities = 128/387 (33%), Positives = 174/387 (44%), Gaps = 93/387 (24%)

Query: 4   WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSC 63
           WK  PAL  G  V+ KPAE TP  AL +  L  +AG P GV++V+ G G           
Sbjct: 154 WKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGE---------- 203

Query: 64  LSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---KVLN 120
                                          +VG+     + + P VD V FT   +V  
Sbjct: 204 -------------------------------EVGEA----LVEHPDVDVVSFTGSTEVGE 228

Query: 121 YIKSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTDD--FKIARE-EIFGPVQT--- 171
            I     +  K   LE GGK          P +   V DD    +A E  ++    T   
Sbjct: 229 RIGETCARPNKRVALEMGGK---------NPII---VMDDADLDLALEGALWSAFGTTGQ 276

Query: 172 --------IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTK 223
                   I+     DE ++R  +    L  G     +D        IN   ++     K
Sbjct: 277 RCTATSRLIVHESVYDEFLKRFVERAKRLRVG---DGLDEETDMGPLINEAQLE-----K 328

Query: 224 VLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 279
           VLNY + G E+G  L  GG+R      +KGYF+EPTVF++VT D +IA+EEIFGPV  +I
Sbjct: 329 VLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALI 388

Query: 280 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFG 337
           +  +L+E IE ANDT+YGL+S I T +++ A      + AG  ++N     A V   PFG
Sbjct: 389 EVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEV-HLPFG 447

Query: 338 GFKESGIG-RELGKAALDEYTELKTVT 363
           G K+SG G RE G  ALD +TE K V 
Sbjct: 448 GVKKSGNGHREAGTTALDAFTEWKAVY 474

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  174 bits (444), Expect = 3e-48
 Identities = 92/247 (37%), Positives = 132/247 (53%), Gaps = 20/247 (8%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCFVCAG------SRT 420
           T  ++MA AAA+ LK+V LELGGKS  ++  DAD      MA +   + AG      +R 
Sbjct: 233 TGRAVMADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRL 291

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
            V    YD  V  A     + K GDP D     GP + A    +V +Y+   V +GG+  
Sbjct: 292 VVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFA 351

Query: 481 AGGKRKGDK--GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
            GG R  D+  G+F+EPTV + + ++ ++AREEIFGPV T+I     D+ +  AND+ YG
Sbjct: 352 CGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYG 411

Query: 539 LASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYT 591
           L+  +   + + A   A  +  G+  V         APFGG+K+SGIGRE+G A  +EY 
Sbjct: 412 LSGTVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYL 471

Query: 592 ELKTVTE 598
           E K +  
Sbjct: 472 ETKLIAT 478

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  174 bits (443), Expect = 4e-48
 Identities = 89/249 (35%), Positives = 124/249 (49%), Gaps = 24/249 (9%)

Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFV-----CAGS-RTYV 422
             +MAAAA S L  V LELGGK P ++  DAD+D    +     F      C G  R  V
Sbjct: 216 KKVMAAAAES-LTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIV 274

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
            E IYD  ++   ++  A + G P D  V  G  +    F ++   +   VE+G +L AG
Sbjct: 275 HEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAG 334

Query: 483 GKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
           GKR    +  +G++  PT+  +VT D KIA+EE+FGPV  ++K    +E +E AN T+YG
Sbjct: 335 GKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYG 394

Query: 539 LASGIVTTNIDTANTFAHAINAGSA---------VVPQAPFGGFKESGIGRELGKAALDE 589
           L + +   +I  A   A  +  G            V Q PFGG K SG GR  G+  L  
Sbjct: 395 LGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRG 454

Query: 590 YTELKTVTE 598
               K+VTE
Sbjct: 455 LCNPKSVTE 463

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  173 bits (441), Expect = 5e-48
 Identities = 84/238 (35%), Positives = 126/238 (52%), Gaps = 22/238 (9%)

Query: 379 AAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFVCAGS------RTYVQEDIYD 428
           AA +  KR  LELGG  PL++  DAD++    +A    +  +G       R  V E + D
Sbjct: 216 AATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVAD 275

Query: 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD 488
            FV   VEK+AA  VGDP D +   G  +D E   ++ N ++  + QG ++  G +R+G 
Sbjct: 276 EFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGA 335

Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI 548
                 PTV  +V  D ++  EE FGPV  +I+ K LDE I  +N T YGL+SG+ T ++
Sbjct: 336 ---LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDL 392

Query: 549 DTANTFAHAINAGSAVV--------PQAPFGGFKESGIG-RELGKAALDEYTELKTVT 597
           DT       ++ G+  V          +PFGG K+SG+G +E  + A+ E T +KT +
Sbjct: 393 DTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  174 bits (443), Expect = 6e-48
 Identities = 77/170 (45%), Positives = 100/170 (58%), Gaps = 4/170 (2%)

Query: 197 VTTNIDTANTFAHAINAG-SVDAEMFTKVLNYIKSGVEQGGKLEAGG---KRKGDKGYFI 252
           V  N    + F      G  V    + +VL+YI+ G ++G KL  GG        KGYFI
Sbjct: 311 VKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFI 370

Query: 253 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 312
            PT+F++V  D +I +EEIFGPV  I KFKT +E I++ANDT YGLA+ + T +I  A+ 
Sbjct: 371 PPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHR 430

Query: 313 FAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
            A  + AG VWIN         PFGGFK SGIGRELG+  L+ YT+ K V
Sbjct: 431 VARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  173 bits (442), Expect = 8e-48
 Identities = 77/271 (28%), Positives = 115/271 (42%), Gaps = 66/271 (24%)

Query: 3   AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGY------- 51
            W    AL  G  V+ KP+E TPLTA+ V  +  +     G P GV++++ G        
Sbjct: 151 GWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELL 210

Query: 52  ---------------------GPMSAPYWRKSCLS---------------PLAYR----- 70
                                G   A  + +  L                 LA R     
Sbjct: 211 VHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFA 270

Query: 71  ------------SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKV 118
                        R  V E +YD F+++ V+     ++GDP D+    GP ++     K 
Sbjct: 271 AVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKY 330

Query: 119 LNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176
           LN I+    QGG +  GGKR   G+ G ++EPT+ + VTDD +I +EE F P+  +IKF 
Sbjct: 331 LNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFD 390

Query: 177 TLDEVIERANDTKYGLASGIVTTNIDTANTF 207
           +L+E I   ND   GL+S I T ++  A  +
Sbjct: 391 SLEEAIAINNDVPQGLSSSIFTEDLREAFRW 421

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  173 bits (440), Expect = 1e-47
 Identities = 87/235 (37%), Positives = 126/235 (53%), Gaps = 21/235 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAY------------YYCFVCAGSRTYV 422
            +  A A   K++SLELGGKSP ++  DAD+D A               C  CAGSR  V
Sbjct: 240 ALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVC--CAGSRLLV 297

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           QE + +  ++K  E+ +  +VGDP DK++  G  VD     ++   ++ G  +G  +   
Sbjct: 298 QESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQP 357

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G     KG F  PT+F+NV    +IA+EEIFGPV  ++ F+T  E +  AN+T YGLA+ 
Sbjct: 358 GADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAAS 417

Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEY 590
           + + N+  A   A ++ AG   +         A FGG++ESG GRE GK  L EY
Sbjct: 418 VWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEY 472

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  171 bits (436), Expect = 3e-47
 Identities = 77/170 (45%), Positives = 105/170 (61%), Gaps = 3/170 (1%)

Query: 198 TTNIDTANTFAHAINAGS-VDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEP 254
              I   +     +  G  V    + KVL++I  G E+G +L  GG+R    +KGYFI P
Sbjct: 287 AEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAP 346

Query: 255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 314
           TVF++V  D +I REEIFGPV  +  F T DE I  AND++YGLA+ +++ + +  +  A
Sbjct: 347 TVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVA 406

Query: 315 HAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 364
            A+ AG VWINC Q   PQAP+GG+K SGIGRELG+  LD Y E+K +T 
Sbjct: 407 EALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQITR 456

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score =  172 bits (438), Expect = 3e-47
 Identities = 95/251 (37%), Positives = 130/251 (51%), Gaps = 31/251 (12%)

Query: 380 AASNLKRVSLELGGKSPLVICAD-ADVDMAYY---------YCF----VCA-GSRTYVQE 424
           A+ N+  V+LELGGKSP +  AD  D D A++         +      VC   SR  +QE
Sbjct: 234 ASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALIQE 293

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD F+++A+E+  A K G+P D     G Q   E   K+L+YI  G E+G ++  GG+
Sbjct: 294 SIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGE 353

Query: 485 RK----GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
           R        G +  PT F    +  +I +EEIFGPV  +  FK  +E +E ANDT YGL 
Sbjct: 354 RNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLG 412

Query: 541 SGIVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGIGRELGKAALDEYTEL 593
           +G+ T + +TA      I AG             A FGG+K+SGIGRE  K  LD Y + 
Sbjct: 413 AGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQT 472

Query: 594 KTVTESPLRSY 604
           K +    L SY
Sbjct: 473 KNL----LVSY 479

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  171 bits (436), Expect = 3e-47
 Identities = 94/326 (28%), Positives = 134/326 (41%), Gaps = 46/326 (14%)

Query: 309 TANTFAHAINAGSVWINCYQAVV----PQAPFGG------FKESGIGRELGKAALDEYTE 358
             N    A+ AG+       AV+    PQ P  G      F E+G+   + +     +  
Sbjct: 133 AVNAVIPALLAGN-------AVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHET 185

Query: 359 LKTVTESPL--------RSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADAD------ 404
              +   P               +I   AAA    +V LELGGK P  +  DAD      
Sbjct: 186 SAALIADPRIDHVSFTGSVAGGRAI-QRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAE 244

Query: 405 --VDMAYYYC--FVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAE 460
             VD A++      C+  R YV E IYD FV+  V      K+GDP D S   GP V A 
Sbjct: 245 SLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSAR 304

Query: 461 MFTKVLNYIKSGVEQGGKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ 517
               V   I   + +G +    G         G ++ PTV +NV    ++ REE FGPV 
Sbjct: 305 AADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVV 364

Query: 518 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPF 570
            I+K K+  E I   ND++YGL + + T +I  A      +  G+  +       P   +
Sbjct: 365 GIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAW 424

Query: 571 GGFKESGIGRELGKAALDEYTELKTV 596
            G K+SG G  L +   D+ T  K+ 
Sbjct: 425 TGVKDSGRGVTLSRLGYDQLTRPKSY 450

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  171 bits (435), Expect = 8e-47
 Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 4/147 (2%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R +VQ+ I   F  + +E+    ++GDP D +   GP V      KVL YI+ G  +G +
Sbjct: 289 RVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGAR 348

Query: 132 LEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
           L  GG+R        G F+ PTVF++ TDD  I REEIFGPV +++ F   DEVI RAND
Sbjct: 349 LLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARAND 408

Query: 188 TKYGLASGIVTTNIDTANTFAHAINAG 214
           T+YGLA+G+ T ++  A+   H + AG
Sbjct: 409 TEYGLAAGVFTADLSRAHRVIHQLEAG 435

Length = 488

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  169 bits (431), Expect = 1e-46
 Identities = 58/142 (40%), Positives = 88/142 (61%)

Query: 221 FTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
           + KV   ++    +G K+ AGG+     GYFI PT+  +  +  +I  EE FGPV  ++K
Sbjct: 303 YDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLK 362

Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFK 340
           +   DEVI RAND++YGL + + +++++ A   A  + AG+VWIN + A+ P APFGG K
Sbjct: 363 YSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHK 422

Query: 341 ESGIGRELGKAALDEYTELKTV 362
           +SGIG E G   L EYT+ + +
Sbjct: 423 QSGIGVEFGIEGLKEYTQTQVI 444

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score =  170 bits (433), Expect = 1e-46
 Identities = 121/390 (31%), Positives = 162/390 (41%), Gaps = 82/390 (21%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M  WK  PALAAG  V+LKPAEQTP + L +  L      P GV++V+ G+G  +     
Sbjct: 152 MATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAG---- 206

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
                PLA   R               + K A       F      G  +   M     N
Sbjct: 207 ----KPLASSKR---------------IAKVA-------FTGETTTGRLI---MQYASEN 237

Query: 121 YIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF----SNVTDDFKIAREEIFG--------- 167
            I   +E GGK                P +F     +  D F     E F          
Sbjct: 238 IIPVTLELGGK---------------SPNIFFADVMDADDAFFDKALEGFVMFALNQGEV 282

Query: 168 ---PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKV 224
              P + +I+    D  +ERA +    +  G     +DT               E   K+
Sbjct: 283 CTCPSRALIQESIYDRFMERALERVKAIKQG---NPLDTETMIG-----AQASLEQLEKI 334

Query: 225 LNYIKSGVEQGGKLEAGGKRK----GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
           L+YI  G E+G ++  GG+R        G +  PT F    +  +I +EEIFGPV  +  
Sbjct: 335 LSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTT 393

Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFK 340
           FK  +E +E ANDT YGL +G+ T + +TA      I AG VW NCY      A FGG+K
Sbjct: 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYK 453

Query: 341 ESGIGRELGKAALDEYTELKTVTESPLRSY 370
           +SGIGRE  K  LD Y + K +    L SY
Sbjct: 454 QSGIGRENHKMMLDHYQQTKNL----LVSY 479

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  169 bits (430), Expect = 3e-46
 Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 5/151 (3%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           +R +VQ  I D F ++ VE+    ++GDP D+  Q G  +      KVL YI+S  ++G 
Sbjct: 262 TRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGA 321

Query: 131 KLEAGGKR-----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
           K+  GG+R       + G+++ P V ++ TDD  I REEIFGPV +I+ F T +EVI RA
Sbjct: 322 KVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRA 381

Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           NDT YGLA+G+ T ++  A+     + AG+ 
Sbjct: 382 NDTTYGLAAGVFTRDLQRAHRVIAQLQAGTC 412

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  168 bits (429), Expect = 5e-46
 Identities = 66/159 (41%), Positives = 89/159 (55%), Gaps = 7/159 (4%)

Query: 62  SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
           SC +P    +R  V    Y    + A   A A  VGDP D +   GP   A  F +V  Y
Sbjct: 272 SCNAP----TRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGY 327

Query: 122 IKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 178
           I+ G+E+G +L AGG  +    ++GYF++PTVF++VT D  IAREEIFGPV +II +   
Sbjct: 328 IQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDE 387

Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVD 217
           DE I  ANDT YGLA  + + + + A   A  + AG V 
Sbjct: 388 DEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVH 426

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  169 bits (429), Expect = 5e-46
 Identities = 74/150 (49%), Positives = 94/150 (62%), Gaps = 4/150 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAAR-KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG 129
           SR YVQE IYD FV+K VE      KVG PFD     GPQV    + +VL+YI+ G ++G
Sbjct: 291 SRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEG 350

Query: 130 GKLEAGG---KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
            KL  GG        KGYFI PT+F++V  D +I +EEIFGPV  I KFKT +E I++AN
Sbjct: 351 AKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKAN 410

Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           DT YGLA+ + T +I  A+  A  + AG V
Sbjct: 411 DTTYGLAAAVFTKDIRRAHRVARELEAGMV 440

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  167 bits (425), Expect = 2e-45
 Identities = 83/243 (34%), Positives = 112/243 (46%), Gaps = 24/243 (9%)

Query: 380 AASNLKRVSLELGGKSPLVICADADVDMAYYY----CFVCAGSR------TYVQEDIYDT 429
           AA+N KRV    G K+  V+  DAD++          F  AG R           D  D 
Sbjct: 234 AAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADE 293

Query: 430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR---- 485
           ++ K VE+A   KVG   D     GP +      ++   I+SGVE+G KL   G+     
Sbjct: 294 WIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVP 353

Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
             + G F+ PT+  NVT D KI +EEIFGPV +I++  TLDE I   N   YG  + I T
Sbjct: 354 GYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFT 413

Query: 546 TNIDTANTFAHAINAGS--------AVVPQAPFGGFKES--GIGRELGKAALDEYTELKT 595
            +   A  F   ++AG           +    FGG+K S  G     GK  +  YT+ KT
Sbjct: 414 RSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKT 473

Query: 596 VTE 598
           VT 
Sbjct: 474 VTS 476

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  164 bits (418), Expect = 1e-44
 Identities = 62/150 (41%), Positives = 92/150 (61%), Gaps = 3/150 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KG-DKGYFIEPTVFSNVTDDFKIAREEIFG 273
             A    +V  YI  G  +G +L  GG R  G D+G+F+EPT+F++V +D +IA+EEIFG
Sbjct: 322 ASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFG 381

Query: 274 PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ 333
           PV ++I +   D+ +  AND+ YGL+  + T +++     A  I  G+V +N +  +   
Sbjct: 382 PVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGF-RLDFG 440

Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVT 363
           APFGGFK+SGIGRE G   LD Y E K++ 
Sbjct: 441 APFGGFKQSGIGREGGPEGLDAYLETKSIY 470

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  164 bits (418), Expect = 1e-44
 Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 10/186 (5%)

Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKL 238
           DEV+E          +  V    D        I+A   D     +V  YI  G ++G +L
Sbjct: 280 DEVVEALAAA---FEALPVGDPADPGTVMGPLISAAQRD-----RVEGYIARGRDEGARL 331

Query: 239 EAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 296
             GG R    DKG+++EPT+F++V +D +IA+EEIFGPV  +I +   DE +  AND+ Y
Sbjct: 332 VTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDY 391

Query: 297 GLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEY 356
           GL+ G+ + ++D A   A  I  GSV IN      P APFGG+K+SG+GRE G   L+E+
Sbjct: 392 GLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEF 451

Query: 357 TELKTV 362
            E K++
Sbjct: 452 LETKSI 457

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  163 bits (415), Expect = 3e-44
 Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 4/176 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V E IYD F+++    A + + GDP D   Q GP V    F +VL+Y+  G E+G 
Sbjct: 264 SRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGA 323

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           +L  GGKR G +G+F+EPT+F+ V  + +IA+EEIFGPV ++++F+  +E +  AN T+Y
Sbjct: 324 RLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEY 383

Query: 191 GLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG 246
           GLA+G+ T ++  A+  A A+ AG+V    +    N    G   GG  ++G  R+ 
Sbjct: 384 GLAAGVWTRDLGRAHRVAAALKAGTV----WINTYNRFDPGSPFGGYKQSGFGREM 435

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  163 bits (415), Expect = 4e-44
 Identities = 74/146 (50%), Positives = 94/146 (64%), Gaps = 1/146 (0%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YV EDIYD F++K VEK  A KVGDPFD +   GP V+     KV   ++  VE G  
Sbjct: 281 RVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGAT 340

Query: 132 LEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           L  GGKR +G+KGYF EPTV +NV  D +I +EEIFGPV  ++KF +LDE IE AND++Y
Sbjct: 341 LLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEY 400

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL S I T N++TA    + +  G  
Sbjct: 401 GLTSYIYTENLNTAMRATNELEFGET 426

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  163 bits (414), Expect = 7e-44
 Identities = 104/282 (36%), Positives = 146/282 (51%), Gaps = 30/282 (10%)

Query: 343 GIGRELGKAALDE-YTELKTVTESPLRSYTSHSIMAAAA-----ASNLKRVSLELGGKSP 396
           G G E+G   +D   T L T T S  R   +  I   AA       +LKRV  E+GGK  
Sbjct: 232 GSGSEVGDYLVDHPKTSLITFTGS--REVGTR-IFERAAKVQPGQKHLKRVIAEMGGKDT 288

Query: 397 LVICADADVDMA----YYYCF------VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDP 446
           +++  DAD+++A    +   F        AGSR  V E +YD  V++ VE   + KVG P
Sbjct: 289 VIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPP 348

Query: 447 FDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506
               V  GP +D + F K++ YI+ G  +G +L +GG     KGYFI PT+F++V    +
Sbjct: 349 DSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKGYFIGPTIFADVDRKAR 407

Query: 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS---- 562
           +A+EEIFGPV   I+    DE +E AN+T+YGL  G+++ N D  N        G+    
Sbjct: 408 LAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFN 467

Query: 563 -----AVVPQAPFGGFKESGIGRELGKA-ALDEYTELKTVTE 598
                A+V   PFGGFK SG   + G    L  + + KTVTE
Sbjct: 468 RNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTVTE 509

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  161 bits (409), Expect = 1e-43
 Identities = 60/146 (41%), Positives = 82/146 (56%), Gaps = 3/146 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            R  V E +YD FV+K V KA A  VGDP D     GP ++     +V   ++  V  G 
Sbjct: 246 GRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGA 305

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           +L  GG  +G    F +PTV S+VT D  I REEIFGPV  +I F   +E +E ANDT+Y
Sbjct: 306 RLLTGGTYEGL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEY 362

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL++ + T +++ A  FA  +  G V
Sbjct: 363 GLSAAVFTRDLERAMAFAERLETGMV 388

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  158 bits (403), Expect = 2e-43
 Identities = 56/111 (50%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 314
           TV  +V  D  IA+EEIFGPV  +I+FK  +E I  ANDT+YGL +G+ T +++ A   A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316

Query: 315 HAINAGSVWINCYQA-VVPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 364
             + AG+V+IN     V P+APFGG K SGIGRE G   L+EYT  KTV  
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVVI 367

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  159 bits (405), Expect = 4e-43
 Identities = 66/155 (42%), Positives = 89/155 (57%), Gaps = 11/155 (7%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           IN   VD     +V   ++  V  G +L  GG  +G    F +PTV S+VT D  I REE
Sbjct: 285 INERQVD-----RVHAIVEDAVAAGARLLTGGTYEGL---FYQPTVLSDVTPDMPIFREE 336

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
           IFGPV  +I F   +E +E ANDT+YGL++ + T +++ A  FA  +  G V IN  Q V
Sbjct: 337 IFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHIND-QTV 395

Query: 331 V--PQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
              P  PFGG K SG GR  G A+L+E+TE + +T
Sbjct: 396 NDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  158 bits (401), Expect = 2e-42
 Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 1/148 (0%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
             A    +V  ++        ++  GG+R    GYF EPTV + V  D +I +EEIFGPV
Sbjct: 303 NSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPV 361

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
            T+  F   DE IE AND +YGLAS + T ++  A   +  ++ G+VW+N +  +  + P
Sbjct: 362 VTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMP 421

Query: 336 FGGFKESGIGRELGKAALDEYTELKTVT 363
            GGFK+SG G++L   AL++YT +K V 
Sbjct: 422 HGGFKQSGYGKDLSIYALEDYTRIKHVM 449

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  158 bits (401), Expect = 2e-42
 Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 4/152 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIF 272
           + A+   +V  ++     +G ++ AGG+        GYF+ PT+  +V  D ++A+EEIF
Sbjct: 302 ISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIF 361

Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
           GPV  ++ F    E I  AN T YGL +G+ T + D A   A  + AG V++N Y A   
Sbjct: 362 GPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGG 421

Query: 333 -QAPFGGFKESGIGRELGKAALDEYTELKTVT 363
            + PFGG K+SG GRE G  AL  YT+ KTV 
Sbjct: 422 IELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  156 bits (396), Expect = 1e-41
 Identities = 64/147 (43%), Positives = 90/147 (61%), Gaps = 1/147 (0%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V E I D FV   V ++   +VGDP D   + G  ++     K+ +Y+ +G  +G 
Sbjct: 266 SRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGA 325

Query: 131 KLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
            L  GG+R     G F +PT+F++VT D  IAREEIFGPV +++ F T+DE I  ANDT 
Sbjct: 326 TLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTV 385

Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
           YGL++G+ + +IDTA T A  I AG+V
Sbjct: 386 YGLSAGVWSKDIDTALTVARRIRAGTV 412

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  156 bits (396), Expect = 1e-41
 Identities = 92/279 (32%), Positives = 132/279 (47%), Gaps = 63/279 (22%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP-MSAPYW 59
           M AWK  PALAAGC V+LKP+E T LT L +A +  +AG P GV++V+ G G    AP  
Sbjct: 136 MAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLA 195

Query: 60  RKSCLSPLAYRSRTYVQEDIY------------------------DTFVKKAVEKAAA-- 93
               +  +++   T     +                         D  ++KAVE A    
Sbjct: 196 AHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGC 255

Query: 94  -----------------RKVGDPF-----------------DKSVQQGPQVDAVMFTKVL 119
                              + D F                 ++ V+ GP V    + KVL
Sbjct: 256 FWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVL 315

Query: 120 NYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT 177
           ++I  G E+G +L  GG+R    +KGYFI PTVF++V  D +I REEIFGPV  +  F T
Sbjct: 316 SFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFAT 375

Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
            DE I  AND++YGLA+ +++ + +  +  A A+ AG V
Sbjct: 376 EDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIV 414

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  156 bits (397), Expect = 1e-41
 Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 19/237 (8%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF-----------VCAGSRTYVQE 424
           +    A ++K+VSLELGG +P ++  DAD+D A                VCA +R YVQ+
Sbjct: 241 LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA-NRLYVQD 299

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            +YD F +K  +  +   +GD  +K V  GP +D +   KV  +I   +E+G ++  GGK
Sbjct: 300 GVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 359

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
                G F +PT+  +V  + K+A+EE FGP+  + +FK   +VI +ANDT++GLA+   
Sbjct: 360 AHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFY 419

Query: 545 TTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
             ++        A       IN G      APFGG K SG+GRE  K  +++Y E+K
Sbjct: 420 ARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476

Length = 482

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  155 bits (394), Expect = 2e-41
 Identities = 83/237 (35%), Positives = 115/237 (48%), Gaps = 17/237 (7%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV---------C-AGSRTYVQEDI 426
           AA A   +K+  LELGG  P ++   AD+D A               C A  R  V  D+
Sbjct: 218 AAIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADV 277

Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
           YD F +K V + AA +VGDP D     GP    +   +V   +   V  G  +  GGKR 
Sbjct: 278 YDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRP 337

Query: 487 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT 546
              G+F  PTV +++T D ++  EE+FGPV ++ +   +DE IE AN T +GL S   T 
Sbjct: 338 DGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTR 397

Query: 547 NIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
           +      F   + AG   +       P+ PFGG K SG GREL    + E+  +KTV
Sbjct: 398 DEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTV 454

Length = 457

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  153 bits (389), Expect = 4e-41
 Identities = 101/365 (27%), Positives = 151/365 (41%), Gaps = 50/365 (13%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           ++A K  PAL  G  +++KP+E TP  A+  A +  + G P GV +++ G G        
Sbjct: 87  LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQ--- 143

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG-DPFDKSVQQGPQVDAVMFTKVL 119
                                       E A   KV       SV  G ++   M     
Sbjct: 144 ----------------------------ELAGNPKVAMVSMTGSVSAGEKI---MAAAAK 172

Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR--EEIFGPVQTIIKFKT 177
           N  K  +E GGK  A      D    ++  V S V +  ++    E ++  VQ  I    
Sbjct: 173 NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVY--VQKGIY--- 227

Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
            D+ + R  +    +  G      D A      INA +++      V   +   VE+G +
Sbjct: 228 -DQFVNRLGEAMQAVQFGNPAERNDIA--MGPLINAAALER-----VEQKVARAVEEGAR 279

Query: 238 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 297
           +  GGK    KGY+  PT+  +V  +  I  EE FGPV  ++ F TL+E I  AND+ YG
Sbjct: 280 VALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYG 339

Query: 298 LASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYT 357
           L S I T N++ A      +  G  +IN       Q    G+++SGIG   GK  L EY 
Sbjct: 340 LTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYL 399

Query: 358 ELKTV 362
           + + V
Sbjct: 400 QTQVV 404

Length = 409

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  154 bits (390), Expect = 7e-41
 Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 8/160 (5%)

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
           +SC S     SR +V E IYD  + + VE+ AA KVGDP D +   GP V    + +V++
Sbjct: 257 QSCGS----TSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMH 312

Query: 121 YIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176
           YI S   +G +L  GG R      + G+++EPTVF++VT   +IAREEIFGPV ++++++
Sbjct: 313 YIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWR 372

Query: 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
              E++ +AN  +YGL + I T +I  A+  A  + AG V
Sbjct: 373 DEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYV 412

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  153 bits (389), Expect = 1e-40
 Identities = 62/152 (40%), Positives = 91/152 (59%), Gaps = 4/152 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEI 271
           V  + + +V++YI S   +G +L  GG R      + G+++EPTVF++VT   +IAREEI
Sbjct: 302 VSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEI 361

Query: 272 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVV 331
           FGPV ++++++   E++ +AN  +YGL + I T +I  A+  A  + AG VWIN      
Sbjct: 362 FGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHF 421

Query: 332 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
             APFGG K SGIGRE     L  YT+ K V 
Sbjct: 422 LGAPFGGVKNSGIGREECLEELLSYTQEKNVN 453

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  154 bits (391), Expect = 1e-40
 Identities = 67/151 (44%), Positives = 92/151 (60%), Gaps = 2/151 (1%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFG 273
           V    + KVL +I +   +G  +  GGKR     KG+FIEPT+ ++VT   +I REE+FG
Sbjct: 337 VSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFG 396

Query: 274 PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ 333
           PV  +  F T DE IE AND+ YGLA  +++ +++     + A  AG VWINC Q    Q
Sbjct: 397 PVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQ 456

Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVTE 364
           AP+GG K SG GRELG+  L+ Y  +K VT+
Sbjct: 457 APWGGIKRSGFGRELGEWGLENYLSVKQVTK 487

Length = 503

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  152 bits (385), Expect = 6e-40
 Identities = 90/274 (32%), Positives = 143/274 (52%), Gaps = 24/274 (8%)

Query: 342 SGIGRELGKA-ALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVIC 400
           +G G E G+A +     +    T S   + T   ++  A  SN+KRV LE GGKS  ++ 
Sbjct: 221 TGFGHEAGQALSRHNDIDAIAFTGS---TRTGKQLLKDAGDSNMKRVWLEAGGKSANIVF 277

Query: 401 ADA-DVDMA---------YYYCFVC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDK 449
           AD  D+  A         Y    VC AG+R  ++E I D F+    ++A   + G P D 
Sbjct: 278 ADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDP 337

Query: 450 SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR 509
           +   G  +D      V ++I+ G E  G+L   G+  G     I PT+F +V  +  ++R
Sbjct: 338 ATTMGTLIDCAHADSVHSFIREG-ESKGQLLLDGRNAGLAAA-IGPTIFVDVDPNASLSR 395

Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQ-- 567
           EEIFGPV  + +F + ++ ++ AND++YGL + + T ++  A+  +  + AGS  V    
Sbjct: 396 EEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYN 455

Query: 568 -----APFGGFKESGIGRELGKAALDEYTELKTV 596
                 PFGG+K+SG GR+    AL+++TELKT+
Sbjct: 456 DGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489

Length = 494

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  149 bits (378), Expect = 2e-39
 Identities = 56/135 (41%), Positives = 76/135 (56%)

Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
           ++  V  G  L  GGKR    G F  PTV ++VT       EE+FGPV  +IK K  +E 
Sbjct: 293 VEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEA 352

Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRE 347
           I  AND+ +GL   + TT+++ A   A  + AG V+IN      P+ PFGG K SG GRE
Sbjct: 353 IALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRE 412

Query: 348 LGKAALDEYTELKTV 362
           LG+  + E+  +KTV
Sbjct: 413 LGRFGIREFVNIKTV 427

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  150 bits (380), Expect = 2e-39
 Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 5/151 (3%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE-QG 129
           SR +V EDIYD F++K V K +  K+GDP D++   G  +    F KV  YI  G+   G
Sbjct: 264 SRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSG 323

Query: 130 GKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
             +  GG   G+     G+F++PT+FS V +++++AREEIFGPV   I +K  DEVI  A
Sbjct: 324 ATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMA 383

Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           ND+ YGLA+ + T ++  A   AHA+ AG V
Sbjct: 384 NDSHYGLAAYVWTRDLGRALRAAHALEAGWV 414

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  150 bits (381), Expect = 2e-39
 Identities = 82/230 (35%), Positives = 113/230 (49%), Gaps = 20/230 (8%)

Query: 385 KRVSLELGGKSPLVICADADVDMAYYYCFVCAGS----------RTYVQEDIYDTFVKKA 434
           KR+ LELGGK P ++  DAD+++A       A S          R  V E + D  V+  
Sbjct: 243 KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELL 302

Query: 435 VEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE 494
            E+ A  KVG P+D  V   P +D +    V   I   V +G  +  GG R+G  G  I 
Sbjct: 303 KEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREG--GNLIY 360

Query: 495 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTF 554
           PT+   VT D ++A EE FGPV  II+   ++E IE AN + YGL + I T +I+ A   
Sbjct: 361 PTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKL 420

Query: 555 AHAINAGSAVV---PQA-----PFGGFKESGIGRELGKAALDEYTELKTV 596
           A A+  G+  +    Q      PF G K+SGIG +    AL   T  K +
Sbjct: 421 ADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGI 470

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  148 bits (377), Expect = 6e-39
 Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 2/148 (1%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           +R  V    YD  V+       A  VGDP D     GP + A    +V  YI  G ++G 
Sbjct: 270 TRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGA 329

Query: 131 KLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
           +L  GG R    DKG+++EPT+F++V +D +IA+EEIFGPV  +I +   DE +  AND+
Sbjct: 330 RLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDS 389

Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
            YGL+ G+ + ++D A   A  I  GSV
Sbjct: 390 DYGLSGGVWSADVDRAYRVARRIRTGSV 417

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  147 bits (374), Expect = 9e-39
 Identities = 58/146 (39%), Positives = 81/146 (55%), Gaps = 1/146 (0%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            R YV E +YD FV   VE  +A +VGDP D+  + GP   A    +V  ++        
Sbjct: 264 CRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHA 322

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           ++  GG+R    GYF EPTV + V  D +I +EEIFGPV T+  F   DE IE AND +Y
Sbjct: 323 RVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEY 382

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GLAS + T ++  A   +  ++ G+V
Sbjct: 383 GLASSVWTRDVGRAMRLSARLDFGTV 408

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  146 bits (370), Expect = 4e-38
 Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 6/149 (4%)

Query: 221 FTKVLNYIKSGVE-QGGKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           F KV  YI  G+   G  +  GG   G+     G+F++PT+FS V +++++AREEIFGPV
Sbjct: 308 FAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPV 367

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
              I +K  DEVI  AND+ YGLA+ + T ++  A   AHA+ AG V +N      P   
Sbjct: 368 LCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQS 427

Query: 336 FGGFKESGIGRELG-KAALDEYTELKTVT 363
           +GGFK+SG+GRE   +  L+ +T+ KTV 
Sbjct: 428 YGGFKQSGLGREASLEGMLEHFTQKKTVN 456

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  145 bits (369), Expect = 5e-38
 Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 3/146 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V+E +YD FVKK V +A+  KVGDP D     GP +      ++   ++  V +G 
Sbjct: 266 SRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGA 325

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           KL  GGK  G+   F +PTV ++VT D +I REE FGPV ++I  K  +E +E ANDT+Y
Sbjct: 326 KLLTGGKYDGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEY 382

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL++ I+T ++  A   A  + +G V
Sbjct: 383 GLSAAILTNDLQRAFKLAERLESGMV 408

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  143 bits (364), Expect = 6e-38
 Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 8/111 (7%)

Query: 496 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 555
           TV  +V  D  IA+EEIFGPV  +I+FK  +E I  ANDT+YGL +G+ T +++ A   A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316

Query: 556 HAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTVTE 598
             + AG+  +        P+APFGG K SGIGRE G   L+EYT  KTV  
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVVI 367

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  144 bits (366), Expect = 2e-37
 Identities = 67/153 (43%), Positives = 92/153 (60%), Gaps = 6/153 (3%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIARE 269
           +N  ++D     KV   ++  VE G  L  GGKR +G+KGYF EPTV +NV  D +I +E
Sbjct: 319 VNEAALD-----KVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQE 373

Query: 270 EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA 329
           EIFGPV  ++KF +LDE IE AND++YGL S I T N++TA    + +  G  +IN    
Sbjct: 374 EIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENF 433

Query: 330 VVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
              Q    G+K+SG+G   GK  L+EY + K V
Sbjct: 434 EAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVV 466

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  144 bits (365), Expect = 2e-37
 Identities = 54/145 (37%), Positives = 81/145 (55%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YV E IYD F +  V  A A  VGD  D     GP  + + + KV   ++    +G K
Sbjct: 260 RLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAK 319

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           + AGG+     GYFI PT+  +  +  +I  EE FGPV  ++K+   DEVI RAND++YG
Sbjct: 320 VLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYG 379

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L + + +++++ A   A  + AG+V
Sbjct: 380 LGASVWSSDLERAEAVARRLEAGTV 404

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  143 bits (363), Expect = 3e-37
 Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 4/137 (2%)

Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
           ++  V +G KL  GGK  G+   F +PTV ++VT D +I REE FGPV ++I  K  +E 
Sbjct: 317 VEDAVAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEA 373

Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFGGFKESGIGR 346
           +E ANDT+YGL++ I+T ++  A   A  + +G V IN    +     PFGG K SG GR
Sbjct: 374 LELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGR 433

Query: 347 ELGKAALDEYTELKTVT 363
           E G+ +++E+TELK +T
Sbjct: 434 EGGEWSMEEFTELKWIT 450

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  143 bits (363), Expect = 3e-37
 Identities = 59/155 (38%), Positives = 82/155 (52%), Gaps = 4/155 (2%)

Query: 62  SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
           SC++      R  V ED+YD F++K VE  AA KVGDP D+    GP     +  ++   
Sbjct: 237 SCIAA----KRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQ 292

Query: 122 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 181
           ++  V  G  L  GGKR    G F  PTV ++VT       EE+FGPV  +IK K  +E 
Sbjct: 293 VEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEA 352

Query: 182 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           I  AND+ +GL   + TT+++ A   A  + AG V
Sbjct: 353 IALANDSPFGLGGSVFTTDLERAERVARRLEAGMV 387

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  143 bits (362), Expect = 5e-37
 Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 4/143 (2%)

Query: 222 TKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
            ++  +++  VE G +L  GGKR G     +EPTV ++V  D K+  EE+F PV ++  F
Sbjct: 313 ERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPF 369

Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN-CYQAVVPQAPFGGFK 340
            TLDE I  AND+ YGL +G+ T ++  A   A  +  G V IN      V   P+GG K
Sbjct: 370 DTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVK 429

Query: 341 ESGIGRELGKAALDEYTELKTVT 363
           ESG GRE  + A++E TE+K V 
Sbjct: 430 ESGTGREGPRYAIEEMTEIKLVC 452

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  143 bits (363), Expect = 5e-37
 Identities = 57/151 (37%), Positives = 79/151 (52%), Gaps = 15/151 (9%)

Query: 223 KVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
           K LN I+    QGG +  GGKR   G+ G ++EPT+ + VTDD +I +EE F P+  +IK
Sbjct: 329 KYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIK 388

Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTF--AHAINAGSVWINCYQAVVP------ 332
           F +L+E I   ND   GL+S I T ++  A  +      + G V +N     +P      
Sbjct: 389 FDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVN-----IPTSGAEI 443

Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTVT 363
              FGG KE+G GRE G  A  +Y    T T
Sbjct: 444 GGAFGGEKETGGGRESGSDAWKQYMRRSTCT 474

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  143 bits (362), Expect = 6e-37
 Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 9/158 (5%)

Query: 67  LAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGV 126
           L  RSR       YD  V+      AA KVGDP D + Q GP   A    +V  YI  G 
Sbjct: 286 LVPRSR-------YDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGR 338

Query: 127 EQGGKLEAGGKR-KG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIER 184
            +G +L  GG R  G D+G+F+EPT+F++V +D +IA+EEIFGPV ++I +   D+ +  
Sbjct: 339 AEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI 398

Query: 185 ANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFT 222
           AND+ YGL+  + T +++     A  I  G+V    F 
Sbjct: 399 ANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR 436

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  142 bits (360), Expect = 8e-37
 Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 3/145 (2%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R +V EDIYD F+++ V       VGDP D+    GP +      ++  +++  VE G +
Sbjct: 269 RIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGAR 328

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           L  GGKR G     +EPTV ++V  D K+  EE+F PV ++  F TLDE I  AND+ YG
Sbjct: 329 LLTGGKRDGA---ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYG 385

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L +G+ T ++  A   A  +  G V
Sbjct: 386 LQAGVFTNDLQKALKAARELEVGGV 410

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  142 bits (360), Expect = 8e-37
 Identities = 62/145 (42%), Positives = 85/145 (58%), Gaps = 2/145 (1%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V+E++YD F+K  VEK    KVGDP D+S   GP +      ++ N +   VE+GGK
Sbjct: 271 RILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGK 330

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           +  GGKR  D+G F  PTV  N T D  + +EE+FGPV  I K K  +E +E AN T+YG
Sbjct: 331 ILYGGKR--DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYG 388

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L + + T +I+ A   A  + AG V
Sbjct: 389 LQASVFTNDINRALKVARELEAGGV 413

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score =  142 bits (361), Expect = 9e-37
 Identities = 81/257 (31%), Positives = 118/257 (45%), Gaps = 27/257 (10%)

Query: 366 PLRSYTSHSIM----AAAAASNLKRVSLELGGKSPLVICADADVDMAY-YYCFVCAGS-- 418
           PL S+T  + +      A A+   R  LELGG + +++  DAD+D+A     F   G+  
Sbjct: 216 PLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAG 275

Query: 419 -------RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKS 471
                  R  V E IYD  +++  +     ++GDP D     GP          L  I+ 
Sbjct: 276 QRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEE 335

Query: 472 GVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIER 531
              QGG +  GGK     G ++EPT+      D  I +EE F P+  ++KF TL+E I  
Sbjct: 336 AKSQGGTVLFGGKVIDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAW 394

Query: 532 ANDTKYGLASGIVTTNIDTANTFAHA---------INAGS--AVVPQAPFGGFKESGIGR 580
            N+   GL+S I TT++  A  +            +N G+  A +  A FGG KE+G GR
Sbjct: 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGA-FGGEKETGGGR 453

Query: 581 ELGKAALDEYTELKTVT 597
           E G  A  +Y    T T
Sbjct: 454 ESGSDAWKQYMRRSTCT 470

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score =  139 bits (353), Expect = 8e-36
 Identities = 85/243 (34%), Positives = 117/243 (48%), Gaps = 32/243 (13%)

Query: 379 AAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGS------------RTYVQEDI 426
           AA +  +R  LELGG  PL++  DAD+D A        GS            R  VQE +
Sbjct: 235 AARAGYRRQVLELGGNDPLIVMEDADLDRAA--DLAVKGSYKNSGQRCTAVKRMLVQESV 292

Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVD---AEMFTKVLNYIKSGVEQGGKLEAGG 483
            D F +  VEK  A + GDP D SV  G  +D   A +F   +N     + QG +L  G 
Sbjct: 293 ADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVN---EAIAQGARLLLGN 349

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
            R G       PTV   V     + REE FGPV  +I+F  +D+ I  +N T YGL+SG+
Sbjct: 350 VRDGA---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGV 406

Query: 544 VTTNIDTANTFAHAINAGSAVVPQ--------APFGGFKESGIGRELG-KAALDEYTELK 594
            T  +D    F   +  G+  V +         PFGG K+SG+G + G + A+  +T LK
Sbjct: 407 CTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLK 466

Query: 595 TVT 597
           T +
Sbjct: 467 TYS 469

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  140 bits (355), Expect = 9e-36
 Identities = 57/132 (43%), Positives = 84/132 (63%), Gaps = 3/132 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V E +YD F+++ VE+  A KVGDP D  V  GP +D     ++  YI+ G +  G
Sbjct: 319 SRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIG-KSEG 377

Query: 131 KLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
           +L  GG+      +GYF++PT+F++V  D ++A+EEIFGPV  +IK K  DE +E ANDT
Sbjct: 378 RLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDT 437

Query: 189 KYGLASGIVTTN 200
           +YGL  G+ + +
Sbjct: 438 EYGLTGGVFSRS 449

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  138 bits (351), Expect = 1e-35
 Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
           +   V +G K   GG R    G F EPTV ++V  D  + REE FGPV  ++     DE 
Sbjct: 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEA 374

Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINC--YQAVVPQAPFGGFKESGIG 345
           I  AND++YGL++ + + ++  A   A  + AG+V IN     A +P  PFGG K+SG G
Sbjct: 375 IALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG 434

Query: 346 RELGKAALDEYTELKTVT 363
           R  G   L E+   K + 
Sbjct: 435 RRHGAEGLREFCRPKAIA 452

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score =  138 bits (350), Expect = 2e-35
 Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 17/238 (7%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VCAGSRTY-VQED 425
           + A A + LK+  LELGG  P ++  DAD+++A              VCA ++ + ++E 
Sbjct: 220 IGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEG 279

Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
           I   F ++ V  AAA K+GDP D+    GP    ++  ++ + +++ + +G +L  GG++
Sbjct: 280 IASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEK 339

Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
               G +  PTV +NVT +    REE+FGPV  I   K  +  +E AND+++GL++ I T
Sbjct: 340 IAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFT 399

Query: 546 TNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
           T+   A   A         IN   A   +  FGG K+SG GREL    L E+  ++TV
Sbjct: 400 TDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457

Length = 462

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  138 bits (349), Expect = 3e-35
 Identities = 63/148 (42%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +  E   ++ N +   VE+GGK+  GGKR  D+G F  PTV  N T D  + +EE+FGPV
Sbjct: 309 ISPEAVERMENLVNDAVEKGGKILYGGKR--DEGSFFPPTVLENDTPDMIVMKEEVFGPV 366

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA- 334
             I K K  +E +E AN T+YGL + + T +I+ A   A  + AG V IN          
Sbjct: 367 LPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNL 426

Query: 335 PFGGFKESGIGRELGKAALDEYTELKTV 362
           PFGGFK+SGIGRE  +  + E TE KT+
Sbjct: 427 PFGGFKKSGIGREGVRYTMLEMTEEKTI 454

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  139 bits (351), Expect = 3e-35
 Identities = 107/362 (29%), Positives = 165/362 (45%), Gaps = 49/362 (13%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW-RKSCLSPL 67
            +  G  V+LKPAE  P+ A     + ++AG P GV+  +PG G     Y       S +
Sbjct: 191 PIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLI 250

Query: 68  AYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE 127
            +     V   I+        E+AA           VQ G +           ++K  + 
Sbjct: 251 TFTGSREVGTRIF--------ERAA----------KVQPGQK-----------HLKRVI- 280

Query: 128 QGGKLEAGGKRK--GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
                E GGK     D+   IE    S  T  F  A ++     + ++  K  DEV+ER 
Sbjct: 281 ----AEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERF 336

Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 245
            +    +   +     D+A+ +   +    +D + F K++ YI+ G  +G +L +GG   
Sbjct: 337 VE----ITESLKVGPPDSADVYVGPV----IDQKSFNKIMEYIEIGKAEG-RLVSGGCGD 387

Query: 246 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT 305
             KGYFI PT+F++V    ++A+EEIFGPV   I+    DE +E AN+T+YGL  G+++ 
Sbjct: 388 DSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISN 447

Query: 306 NIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKA-ALDEYTELKTV 362
           N D  N        G+++ N     A+V   PFGGFK SG   + G    L  + + KTV
Sbjct: 448 NRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507

Query: 363 TE 364
           TE
Sbjct: 508 TE 509

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  137 bits (348), Expect = 4e-35
 Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 7/181 (3%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YV E +YD FV + V KA A + G         GP   A     V  ++   V +G K
Sbjct: 265 RVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAK 324

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
              GG R    G F EPTV ++V  D  + REE FGPV  ++     DE I  AND++YG
Sbjct: 325 ALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYG 384

Query: 192 LASGIVTTNIDTANTFAHAINAGSV---DAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 248
           L++ + + ++  A   A  + AG+V   D  +   +      GV+  G    GG+R G +
Sbjct: 385 LSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSG----GGRRHGAE 440

Query: 249 G 249
           G
Sbjct: 441 G 441

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  136 bits (345), Expect = 1e-34
 Identities = 63/143 (44%), Positives = 89/143 (62%), Gaps = 3/143 (2%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V ED+YD FV+K VE+  A   GDP D     GP ++      +L+ I+  VE+G  
Sbjct: 279 RIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGAT 338

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           L  GG+ +G+    +EPTV S+VT+D +IAREEIFGPV  IIK    +E +E ANDT+YG
Sbjct: 339 LLVGGEAEGN---VLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYG 395

Query: 192 LASGIVTTNIDTANTFAHAINAG 214
           L+  + T++++    FA  I+AG
Sbjct: 396 LSGAVFTSDLERGVQFARRIDAG 418

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  135 bits (342), Expect = 2e-34
 Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 4/149 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V   IYD  +++ VE+  A +VG   +     GP + A    +V  ++     +G 
Sbjct: 264 SRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGA 322

Query: 131 KLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
           ++ AGG+        GYF+ PT+  +V  D ++A+EEIFGPV  ++ F    E I  AN 
Sbjct: 323 RIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANG 382

Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
           T YGL +G+ T + D A   A  + AG V
Sbjct: 383 TDYGLVAGVWTRDGDRALRVARRLRAGQV 411

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  136 bits (343), Expect = 2e-34
 Identities = 64/154 (41%), Positives = 91/154 (59%), Gaps = 7/154 (4%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-------KGYFIEPTVFSNVTDDFKIAR 268
           +  E   KVL Y+++  ++G  +  GG+R          +G ++ PTVF+   +  +IA+
Sbjct: 321 IHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQ 380

Query: 269 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ 328
           EEIFGPV T+I FK  +E IE+ANDT+YGLA  + T ++  A+  A A+ AG +W+N   
Sbjct: 381 EEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQN 440

Query: 329 AVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
                 PFGG K SGIGRE G  + D YTE K V
Sbjct: 441 VRHLPTPFGGVKASGIGREGGTYSFDFYTETKNV 474

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  135 bits (342), Expect = 2e-34
 Identities = 61/145 (42%), Positives = 83/145 (57%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           ++ +   KV  +I   VE+G K+  GGKR    G F EPTV SNVT D  +++EE FGP+
Sbjct: 304 INEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPL 363

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
             + KF   +EVI  ANDT+ GLA+   + ++      A A+  G V IN        AP
Sbjct: 364 APVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVVAP 423

Query: 336 FGGFKESGIGRELGKAALDEYTELK 360
           FGG K+SG+GRE  K  ++EY E K
Sbjct: 424 FGGVKQSGLGREGSKYGIEEYLETK 448

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  136 bits (344), Expect = 2e-34
 Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 9/154 (5%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           IN  +V      KV ++++  V +G K+  GGKR    G F EPTV  +VT+D  I REE
Sbjct: 346 INEAAVQ-----KVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREE 400

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
           +FGPV  + +FKT +E I  ANDT+ GLA+ I T ++  A   + A+  G V +N  + +
Sbjct: 401 VFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVN--EGL 458

Query: 331 VP--QAPFGGFKESGIGRELGKAALDEYTELKTV 362
           +    APFGG K+SG+GRE  K  +DEY E+K V
Sbjct: 459 ISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492

Length = 498

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  135 bits (342), Expect = 4e-34
 Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 7/153 (4%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  VQE I + FV+K VE+  A +VG P D   + GP +      KVL Y+++  ++G 
Sbjct: 282 SRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGA 341

Query: 131 KLEAGGKRKGD-------KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIE 183
            +  GG+R          +G ++ PTVF+   +  +IA+EEIFGPV T+I FK  +E IE
Sbjct: 342 TILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIE 401

Query: 184 RANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           +ANDT+YGLA  + T ++  A+  A A+ AG +
Sbjct: 402 KANDTRYGLAGYVWTNDVGRAHRVALALEAGMI 434

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  134 bits (340), Expect = 4e-34
 Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 22/213 (10%)

Query: 386 RVSLELGGKSPLVICADADVDMA---------YYYCFVCAG-SRTYVQEDIYDTFVKKAV 435
           R +LE GG +P+++   AD+D           Y+   VC    R +V  +I D F ++  
Sbjct: 227 RCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLA 286

Query: 436 EKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP 495
             A    VGDP D   + GP +      +V  ++   V  G +L  GGKR  D  Y   P
Sbjct: 287 AAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTY--AP 344

Query: 496 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 555
           TV  +   D K++ +EIFGPV  +  +  LDE I +AN       + + T ++D A    
Sbjct: 345 TVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAV 404

Query: 556 HAINAGSAV---------VPQAPFGGFKESGIG 579
             ++A +AV         V   PF G ++SG G
Sbjct: 405 RRLDA-TAVMVNDHTAFRVDWMPFAGRRQSGYG 436

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score =  134 bits (339), Expect = 4e-34
 Identities = 82/246 (33%), Positives = 119/246 (48%), Gaps = 30/246 (12%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGSRT-------YVQ 423
           +MAAAA  +L  V+LELGGKSP ++   AD+  A     +  F+ AG +T       +V 
Sbjct: 192 VMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAG-QTCIAPDYVFVH 249

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQ----VDAEMFTKVLNYIKSGVEQGGKL 479
           E + D FV+  ++    +  G   D + +  P     V+   F ++   +   V +G K+
Sbjct: 250 ESVKDAFVE-HLKAEIEKFYGK--DAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKV 306

Query: 480 EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 539
           E GG+    + Y I PTV +NVT D KI +EEIFGPV  II ++ LDEVIE  N     L
Sbjct: 307 EFGGQFDAAQRY-IAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPL 365

Query: 540 ASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEY 590
           A  + + +    N      ++G  VV         P  PFGG   SGIG   G      +
Sbjct: 366 ALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAF 425

Query: 591 TELKTV 596
           +  + V
Sbjct: 426 SHERAV 431

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  134 bits (339), Expect = 5e-34
 Identities = 70/185 (37%), Positives = 98/185 (52%), Gaps = 9/185 (4%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YV + IYD F KK  E     KVG+  D+ V QGP ++     KV  +I   VE+G K
Sbjct: 266 RLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAK 325

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           +  GGKR    G F EPTV SNVT D  +++EE FGP+  + KF   +EVI  ANDT+ G
Sbjct: 326 VVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVG 385

Query: 192 LASGIVTTNIDTANTFAHAINAG--SVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG 249
           LA+   + ++      A A+  G   ++  + + V+         GG  ++G  R+G K 
Sbjct: 386 LAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVV------APFGGVKQSGLGREGSK- 438

Query: 250 YFIEP 254
           Y IE 
Sbjct: 439 YGIEE 443

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  135 bits (341), Expect = 7e-34
 Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 2/130 (1%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V ED+YD  ++K VE      VG+P D +   GP ++   F K+++YI+ G ++ G
Sbjct: 324 SRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAYM-GPVINQASFDKIMSYIEIG-KEEG 381

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           +L  GG+    KGYFI+PT+F++V    +I +EEIFGPV   IK K  D  +E AN+T+Y
Sbjct: 382 RLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEY 441

Query: 191 GLASGIVTTN 200
           GL   +++ N
Sbjct: 442 GLTGAVISNN 451

Length = 514

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  133 bits (337), Expect = 1e-33
 Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 11/155 (7%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           IN   VD      +L+ I+  VE+G  L  GG+ +G+    +EPTV S+VT+D +IAREE
Sbjct: 317 INESQVD-----GLLDKIEQAVEEGATLLVGGEAEGN---VLEPTVLSDVTNDMEIAREE 368

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
           IFGPV  IIK    +E +E ANDT+YGL+  + T++++    FA  I+AG   IN  Q V
Sbjct: 369 IFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHIN-DQPV 427

Query: 331 --VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
              P  PFGG K SG+GR  G+ AL+E+T  K ++
Sbjct: 428 NDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWIS 462

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  132 bits (333), Expect = 4e-33
 Identities = 66/185 (35%), Positives = 93/185 (50%), Gaps = 17/185 (9%)

Query: 183 ERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGG 242
            RA   K G+         D A      I+A   D     KVL+Y    VE+G  +  GG
Sbjct: 305 ARAESLKIGVPD-------DPATNMGPLISAEHRD-----KVLSYYALAVEEGATVVTGG 352

Query: 243 -----KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 297
                      G +++PT+++ + D  ++  EEIFGP   I  F + +EVI  ANDT YG
Sbjct: 353 GVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYG 412

Query: 298 LASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYT 357
           LA+ + T ++  A+  A  +  G VW+N +     + PFGG K SGIGRE G  +L+ YT
Sbjct: 413 LAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYT 472

Query: 358 ELKTV 362
           EL  V
Sbjct: 473 ELTNV 477

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  132 bits (333), Expect = 6e-33
 Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 2/148 (1%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V E I   F++K V+ A   K+ DP ++  + GP V    + KVL +I +   +G 
Sbjct: 298 SRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGA 357

Query: 131 KLEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
            +  GGKR     KG+FIEPT+ ++VT   +I REE+FGPV  +  F T DE IE AND+
Sbjct: 358 TILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDS 417

Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
            YGLA  +++ +++     + A  AG V
Sbjct: 418 HYGLAGAVISNDLERCERVSEAFQAGIV 445

Length = 503

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  131 bits (332), Expect = 6e-33
 Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 2/144 (1%)

Query: 223 KVLNYIKSGVEQGGKLEAGGKRKGDK--GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
           +V +Y+   V +GG+   GG R  D+  G+F+EPTV + + ++ ++AREEIFGPV T+I 
Sbjct: 335 RVQSYLDLAVAEGGRFACGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIA 394

Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFK 340
               D+ +  AND+ YGL+  +   + + A   A  +  G+V +N        APFGG+K
Sbjct: 395 HDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYK 454

Query: 341 ESGIGRELGKAALDEYTELKTVTE 364
           +SGIGRE+G A  +EY E K +  
Sbjct: 455 QSGIGREMGVAGFEEYLETKLIAT 478

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  132 bits (333), Expect = 6e-33
 Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 27/240 (11%)

Query: 384 LKRVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTFV 431
            KR+ +E GGK+ +++   AD ++        A+ +    C     SR  + +  Y+  +
Sbjct: 263 FKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAA--SRLILTQGAYEPVL 320

Query: 432 KKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
           ++ +++A    VG P +     GP +DAE   KVL+YI+ G +  G+L  GGKR   +GY
Sbjct: 321 ERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHG-KNEGQLVLGGKRLEGEGY 379

Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD--EVIERANDTKYGLASGIVTTNID 549
           F+ PTV   V    +IA+EEIFGPV ++I++K  D  E +E AN T YGL  G+ +   +
Sbjct: 380 FVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKRE 439

Query: 550 TANTFAHAINAGS---------AVVPQAPFGGFKESGIGRELGKAA-LDEYTELKTVTES 599
                    + G+         A+V   PFGGFK SG   + G    L  + E+K V E 
Sbjct: 440 HLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER 499

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  130 bits (330), Expect = 8e-33
 Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGP 274
           V A    +V   +   + +G KL  GG   +   G  + PT+  NVT D  I  EE FGP
Sbjct: 282 VSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGP 341

Query: 275 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVV--- 331
           V +II+ K  +E +  AND++YGL++ + T ++  A   A  I +G+V IN     V   
Sbjct: 342 VVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHIN--GMTVHDE 399

Query: 332 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
           P  P GG K SG GR  GK  +DE+TE K +T
Sbjct: 400 PTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  131 bits (332), Expect = 8e-33
 Identities = 66/196 (33%), Positives = 93/196 (47%), Gaps = 23/196 (11%)

Query: 178 LDEVIERANDTK--YGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQG 235
           + +++ERA   K   G   G               I+  + +     ++   I+SGVE+G
Sbjct: 295 IPKLVERAKKLKVGAGDDPG---------ADMGPVISPAAKE-----RIEGLIESGVEEG 340

Query: 236 GKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 291
            KL   G+       + G F+ PT+  NVT D KI +EEIFGPV +I++  TLDE I   
Sbjct: 341 AKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAII 400

Query: 292 NDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFGGFKES--GIGREL 348
           N   YG  + I T +   A  F   ++AG V IN    V +    FGG+K S  G     
Sbjct: 401 NANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFY 460

Query: 349 GKAALDEYTELKTVTE 364
           GK  +  YT+ KTVT 
Sbjct: 461 GKDGVRFYTQTKTVTS 476

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  131 bits (333), Expect = 9e-33
 Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 214 GS-VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG-YFIEPTVFSNVTDDFKIAREEI 271
           GS +       V  ++   V +G  + AGGK + D G  F EPTV + VT D ++AREE 
Sbjct: 335 GSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREET 394

Query: 272 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN-----C 326
           FGPV ++     +DE +ERANDT YGL + + T +       A  I AG+V +N      
Sbjct: 395 FGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAA 454

Query: 327 YQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES 365
           + +V   AP GG K+SG+GR  G   L +YTE +T+   
Sbjct: 455 WGSV--DAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQ 491

Length = 524

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  130 bits (329), Expect = 1e-32
 Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 7/155 (4%)

Query: 62  SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
           SC+S      R  V   +YD F  + V +  A K GDP D +   GP +      +V  +
Sbjct: 262 SCISV----QRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGW 317

Query: 122 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 181
           +   V+ G KL  GGKR G     +EPT+  +V  D ++  EE+FGPV T+  +   DE 
Sbjct: 318 VNEAVDAGAKLLTGGKRDGA---LLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEA 374

Query: 182 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           +   ND+K+GL +G+ T +++ A      +  G V
Sbjct: 375 LAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGV 409

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 2e-32
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG-G 130
           R Y Q  IYD  V K     A  KVGDP D+  + GP + A    +V  +++     G  
Sbjct: 285 RIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHI 344

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           ++  GG+    KGY+ EPT+ +    D +I + E+FGPV ++  F   D+ +  AND+ Y
Sbjct: 345 RVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDY 404

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GLAS + T ++  A+  +  +  G  
Sbjct: 405 GLASSVWTRDVGRAHRVSARLQYGCT 430

Length = 475

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  130 bits (328), Expect = 2e-32
 Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 11/188 (5%)

Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK- 237
           DEV +R       LA+  V   +D A+     I+  +VD      V   ++  +  G + 
Sbjct: 275 DEVRDRLAAR---LAAVKVGPGLDPASDMGPLIDRANVDR-----VDRMVERAIAAGAEV 326

Query: 238 LEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 295
           +  GG       KG F+ PT+      D  I +EEIFGPV T+  F    E +  ANDT 
Sbjct: 327 VLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTD 386

Query: 296 YGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDE 355
           YGLA+ + T ++  A   A AI AG+VWIN +  +  +A  GG+++SG+GR  G AAL++
Sbjct: 387 YGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALED 446

Query: 356 YTELKTVT 363
           + E K + 
Sbjct: 447 FIEYKHIY 454

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  129 bits (326), Expect = 3e-32
 Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 3/145 (2%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V E + D +  K   KA    VGDP    V  GP ++A    +V   +   V  G +
Sbjct: 258 RHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGAR 317

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           LEAGG   G    F  PTV S V        EEIFGPV  +  F + +E +  ANDT+YG
Sbjct: 318 LEAGGTYDG---LFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYG 374

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L++GI++ ++  A   A  +  G +
Sbjct: 375 LSAGIISRDVGRAMALADRLRTGML 399

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score =  129 bits (326), Expect = 3e-32
 Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 19/244 (7%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD--------MAYYYCF--VCAGSRT 420
           T   I++  A S +KR  +ELGGK+P+++  DAD+D          +Y       A  R 
Sbjct: 227 TGEHILSHTAPS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRI 285

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KL 479
           Y Q  IYDT V+K     A  K G P D+S + GP        +V+  ++     G  K+
Sbjct: 286 YAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKV 345

Query: 480 EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 539
             GG+++   GY+  PT+ +    D  I ++E+FGPV +I  F   ++V+  AND++YGL
Sbjct: 346 ITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGL 405

Query: 540 ASGIVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEYTE 592
           AS + T ++  A+  +  +  G         +V + P GG K SG G+++    L++YT 
Sbjct: 406 ASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTV 465

Query: 593 LKTV 596
           ++ +
Sbjct: 466 VRHI 469

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  129 bits (326), Expect = 5e-32
 Identities = 42/126 (33%), Positives = 74/126 (58%)

Query: 237 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 296
           ++  GG+    KGY+ EPT+ +    D +I + E+FGPV ++  F   D+ +  AND+ Y
Sbjct: 345 RVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDY 404

Query: 297 GLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEY 356
           GLAS + T ++  A+  +  +  G  W+N +  +V + P GG K+SG G+++    L++Y
Sbjct: 405 GLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDY 464

Query: 357 TELKTV 362
           T ++ V
Sbjct: 465 TVVRHV 470

Length = 475

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  129 bits (327), Expect = 6e-32
 Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YV E IYD FV+  V    A ++G  +D S   G  +       V  ++   V +G  
Sbjct: 300 RIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGAT 359

Query: 132 LEAGGKRKGDKG-YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           + AGGK + D G  F EPTV + VT D ++AREE FGPV ++     +DE +ERANDT Y
Sbjct: 360 VLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPY 419

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL + + T +       A  I AG+V
Sbjct: 420 GLNASVWTGDTARGRAIAARIRAGTV 445

Length = 524

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  128 bits (324), Expect = 8e-32
 Identities = 54/146 (36%), Positives = 74/146 (50%), Gaps = 4/146 (2%)

Query: 75  VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEA 134
              D  D ++ K VE+A   KVG   D     GP +      ++   I+SGVE+G KL  
Sbjct: 286 AVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVL 345

Query: 135 GGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            G+       + G F+ PT+  NVT D KI +EEIFGPV +I++  TLDE I   N   Y
Sbjct: 346 DGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPY 405

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           G  + I T +   A  F   ++AG V
Sbjct: 406 GNGAAIFTRSGAAARKFQREVDAGMV 431

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  128 bits (322), Expect = 1e-31
 Identities = 100/365 (27%), Positives = 151/365 (41%), Gaps = 47/365 (12%)

Query: 7   GPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKS-CLS 65
              +A G  V+ KPAE   +    V  +  +AGFP GV+  LPG G     Y  +   + 
Sbjct: 176 VAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIR 235

Query: 66  PLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSG 125
            + +       + IY+   + A  +                              + +  
Sbjct: 236 GINFTGSLETGKKIYEAAARLAPGQTW----------------------------FKRLY 267

Query: 126 VEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
           VE GGK         D    +E  V S     F    ++     + I+     + V+ER 
Sbjct: 268 VETGGKNAIIVDETADFELVVEGVVVSA----FGFQGQKCSAASRLILTQGAYEPVLERL 323

Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 245
                  A  +     +   T    +    +DAE   KVL+YI+ G +  G+L  GGKR 
Sbjct: 324 ----LKRAERLSVGPPEENGTDLGPV----IDAEQEAKVLSYIEHG-KNEGQLVLGGKRL 374

Query: 246 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD--EVIERANDTKYGLASGIV 303
             +GYF+ PTV   V    +IA+EEIFGPV ++I++K  D  E +E AN T YGL  G+ 
Sbjct: 375 EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434

Query: 304 TTNIDTANTFAHAINAGSVWINCYQ--AVVPQAPFGGFKESGIGRELGKAA-LDEYTELK 360
           +   +         + G+++IN     A+V   PFGGFK SG   + G    L  + E+K
Sbjct: 435 SRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMK 494

Query: 361 TVTES 365
            V E 
Sbjct: 495 AVAER 499

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  126 bits (320), Expect = 2e-31
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 4/140 (2%)

Query: 222 TKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
            +V  ++   V+ G KL  GGKR G     +EPT+  +V  D ++  EE+FGPV T+  +
Sbjct: 312 ERVEGWVNEAVDAGAKLLTGGKRDGA---LLEPTILEDVPPDMEVNCEEVFGPVVTVEPY 368

Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFGGFK 340
              DE +   ND+K+GL +G+ T +++ A      +  G V IN      V   P+GG K
Sbjct: 369 DDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVK 428

Query: 341 ESGIGRELGKAALDEYTELK 360
           +SGIGRE  + A++E TE +
Sbjct: 429 DSGIGREGVRYAIEEMTEPR 448

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  127 bits (321), Expect = 2e-31
 Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 1/148 (0%)

Query: 210 AINAGS-VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR 268
           AI+ G+ VD     ++   ++ G  +G  +   G     KG F  PT+F+NV    +IA+
Sbjct: 325 AIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQ 384

Query: 269 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ 328
           EEIFGPV  ++ F+T  E +  AN+T YGLA+ + + N+  A   A ++ AG VWIN + 
Sbjct: 385 EEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHN 444

Query: 329 AVVPQAPFGGFKESGIGRELGKAALDEY 356
                A FGG++ESG GRE GK  L EY
Sbjct: 445 LFDAAAGFGGYRESGFGREGGKEGLYEY 472

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  127 bits (320), Expect = 4e-31
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  VQE IYD F +   +      VGD F++ V QGP ++     KV ++++  V +G K
Sbjct: 308 RILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAK 367

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           +  GGKR    G F EPTV  +VT+D  I REE+FGPV  + +FKT +E I  ANDT+ G
Sbjct: 368 VLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAG 427

Query: 192 LASGIVTTNIDTANTFAHAINAGSVDAEM 220
           LA+ I T ++  A   + A+  G V    
Sbjct: 428 LAAYIFTRDLQRAWRVSEALEYGIVGVNE 456

Length = 498

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  126 bits (318), Expect = 4e-31
 Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 7/150 (4%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGP--QVDAVMFTKVLNYIKSGVEQG 129
           R YV E IYD FV+  V      K+GDP D S   GP     A  F  V   I   + +G
Sbjct: 263 RIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADF--VRAQIADAIAKG 320

Query: 130 GKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
            +    G         G ++ PTV +NV    ++ REE FGPV  I+K K+  E I   N
Sbjct: 321 ARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMN 380

Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           D++YGL + + T +I  A      +  G+V
Sbjct: 381 DSEYGLTASVWTKDIARAEALGEQLETGTV 410

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  125 bits (317), Expect = 5e-31
 Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V E IYD  ++   ++  A + G P D  V  G  +    F ++   +   VE+G +
Sbjct: 271 RVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGAR 330

Query: 132 LEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
           L AGGKR    +  +G++  PT+  +VT D KIA+EE+FGPV  ++K    +E +E AN 
Sbjct: 331 LLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANS 390

Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
           T+YGL + +   +I  A   A  +  G V
Sbjct: 391 TEYGLGASVFGKDIKRARRIASQLETGMV 419

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score =  125 bits (316), Expect = 6e-31
 Identities = 76/249 (30%), Positives = 111/249 (44%), Gaps = 34/249 (13%)

Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAG------SRTYVQ 423
            I+A AAA +L  V+LELGGKSP+++  +AD+++A     +  F  AG          V 
Sbjct: 198 RIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVD 257

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEM-----FTKVLNYIKSGVEQGGK 478
             +YD FV+        +KV D F             +     F ++ + +       GK
Sbjct: 258 PSVYDEFVE------ELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLD---TTKGK 308

Query: 479 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
           +  GG+       FI PT+ S+V+ D  +  EE+FGPV  IIK   LDE I+  N     
Sbjct: 309 VVIGGEMDEAT-RFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTP 367

Query: 539 LASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDE 589
           LA  I T +    +       +G  V+           APFGG  +SG G   GK   D 
Sbjct: 368 LALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDT 427

Query: 590 YTELKTVTE 598
           +T  +TV +
Sbjct: 428 FTHERTVVK 436

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  125 bits (315), Expect = 1e-30
 Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 6/150 (4%)

Query: 221 FTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ 276
           F ++   +   VE+G +L AGGKR    +  +G++  PT+  +VT D KIA+EE+FGPV 
Sbjct: 314 FDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVM 373

Query: 277 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA--VVPQA 334
            ++K    +E +E AN T+YGL + +   +I  A   A  +  G V IN +     V Q 
Sbjct: 374 VVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQL 433

Query: 335 PFGGFKESGIGRELGKAALDEYTELKTVTE 364
           PFGG K SG GR  G+  L      K+VTE
Sbjct: 434 PFGGVKGSGFGRFAGEEGLRGLCNPKSVTE 463

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  125 bits (315), Expect = 2e-30
 Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 24/195 (12%)

Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
           L+ ++ER    K G          D        I+ G+ D     ++  YI+ G +  G+
Sbjct: 332 LERLVERTKALKVGDPE-------DPEVYMGPVIDKGARD-----RIRRYIEIG-KSEGR 378

Query: 238 LEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 295
           L  GG+      +GYF++PT+F++V  D ++A+EEIFGPV  +IK K  DE +E ANDT+
Sbjct: 379 LLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTE 438

Query: 296 YGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKAA- 352
           YGL  G+ + + +           G+++ N     A+V + PFGGFK SG G    KA  
Sbjct: 439 YGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTG---SKAGG 495

Query: 353 ---LDEYTELKTVTE 364
              L ++ + KTVTE
Sbjct: 496 PDYLLQFMQPKTVTE 510

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  123 bits (312), Expect = 2e-30
 Identities = 53/146 (36%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YV E +YD FV++ V +  A ++G   D     G  +      +V  ++   V +G  
Sbjct: 264 RIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGAT 323

Query: 132 LEAGGKRKGDKG-YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           + AGG+ + D G YF EPTV + VT+D ++  EE FGPV +I +    DE IE ANDT Y
Sbjct: 324 VLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDY 383

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL + + T +       A  + AG+V
Sbjct: 384 GLNASVWTRDGARGRRIAARLRAGTV 409

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score =  123 bits (312), Expect = 2e-30
 Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 28/242 (11%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGSRT-------YVQ 423
           I+  AAA +L  V+LELGGKSP ++  DA++++A        F+ AG +T        V 
Sbjct: 191 IVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAG-QTCIAPDYVLVH 249

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           E I D  ++  ++KA     G+   +S   G  ++   F ++ + +       GK+  GG
Sbjct: 250 ESIKDELIE-ELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLL-----DDGKVVIGG 303

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           +   ++ Y I PT+  +V+ D  + +EEIFGP+  I+ +  LDE IE  N     LA  +
Sbjct: 304 QVDKEERY-IAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYL 362

Query: 544 VTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
            + +           ++G          A +P  PFGG   SG+G   GKA  D ++ LK
Sbjct: 363 FSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLK 422

Query: 595 TV 596
           +V
Sbjct: 423 SV 424

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  123 bits (310), Expect = 4e-30
 Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 9/166 (5%)

Query: 206 TFAHAINAGS-VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG-YFIEPTVFSNVTDD 263
              +  + GS +      +V  ++   V +G  + AGG+ + D G YF EPTV + VT+D
Sbjct: 291 ALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTED 350

Query: 264 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVW 323
            ++  EE FGPV +I +    DE IE ANDT YGL + + T +       A  + AG+V 
Sbjct: 351 MELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVN 410

Query: 324 IN-----CYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 364
           +N      + ++   AP GG K+SG+GR  G   L +YTE +TV  
Sbjct: 411 VNEGYAAAWASI--DAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  123 bits (309), Expect = 6e-30
 Identities = 84/277 (30%), Positives = 122/277 (44%), Gaps = 61/277 (22%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP------M 54
           M+  K GPALAAGC ++LKPA QTP +AL +A L  +AG P GV +V+ G          
Sbjct: 162 MITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELT 221

Query: 55  SAPYWRKSCLSPLAYRSRTYVQE---DIY----------------DTFVKKAVEKAAARK 95
           S P  RK   +      R  +++   DI                 D  + KAVE A A K
Sbjct: 222 SNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASK 281

Query: 96  ------------------------------------VGDPFDKSVQQGPQVDAVMFTKVL 119
                                               +GD  +K V  GP +D     KV 
Sbjct: 282 FRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVE 341

Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 179
            +I   +E+G ++  GGK     G F +PT+  +V  + K+A+EE FGP+  + +FK   
Sbjct: 342 EHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEA 401

Query: 180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           +VI +ANDT++GLA+     ++        A+  G V
Sbjct: 402 DVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIV 438

Length = 482

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  122 bits (308), Expect = 1e-29
 Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 23/193 (11%)

Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
           L++V+E   +   G             N +   +    ++   F K+++YI+ G ++ G+
Sbjct: 337 LEKVVELTKELTVGNP---------EDNAYMGPV----INQASFDKIMSYIEIG-KEEGR 382

Query: 238 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 297
           L  GG+    KGYFI+PT+F++V    +I +EEIFGPV   IK K  D  +E AN+T+YG
Sbjct: 383 LVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYG 442

Query: 298 LASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKAALDE 355
           L   +++ N +         + G+++ N  C  A+V   PFGGF  SG      KA   +
Sbjct: 443 LTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTD---SKAGGPD 499

Query: 356 Y----TELKTVTE 364
           Y     + KTV+E
Sbjct: 500 YLLLFLQAKTVSE 512

Length = 514

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  120 bits (303), Expect = 3e-29
 Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 3/145 (2%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YV E++YD F++  V      KVGDP D+    GP +      +V  +++  VE G +
Sbjct: 269 RIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGAR 328

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           L  GG+R G      +PTV  +V  D K++ EE FGPV  II++   +E I  AN T YG
Sbjct: 329 LLCGGERDGA---LFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYG 385

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L +GI T +++ A   A  +  G V
Sbjct: 386 LQAGIFTRDLNVAFKAAEKLEVGGV 410

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  120 bits (303), Expect = 4e-29
 Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 5/150 (3%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YV+  I+D FV     +A + K+G P D +   GP + A    KVL+Y    VE+G  
Sbjct: 288 RVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT 347

Query: 132 LEAGG-----KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
           +  GG           G +++PT+++ + D  ++  EEIFGP   I  F + +EVI  AN
Sbjct: 348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALAN 407

Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           DT YGLA+ + T ++  A+  A  +  G V
Sbjct: 408 DTPYGLAASVWTEDLSRAHRVARQMEVGIV 437

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  120 bits (304), Expect = 4e-29
 Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVD--AVMFTKVLNYIKSGVEQG 129
           R  V E + D  V+   E+ A  KVG P+D  V   P +D  +  F + L  I   V +G
Sbjct: 287 RVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGL--IDDAVAKG 344

Query: 130 GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
             +  GG R+G  G  I PT+   VT D ++A EE FGPV  II+   ++E IE AN + 
Sbjct: 345 ATVLNGGGREG--GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSN 402

Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
           YGL + I T +I+ A   A A+  G+V
Sbjct: 403 YGLQASIFTKDINKARKLADALEVGTV 429

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score =  119 bits (302), Expect = 5e-29
 Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 28/246 (11%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGSRT-------YVQ 423
           I+  AAA +L  V+LELGGKSP ++  DA++ +A     +  F+ AG +T        V 
Sbjct: 191 IVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAG-QTCVAPDYVLVH 249

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           E + + F+K+  E+       DP  +S   G  ++ + F ++   +       GK+  GG
Sbjct: 250 ESVKEKFIKELKEEIKKFYGEDPL-ESPDYGRIINEKHFDRLAGLLD-----NGKIVFGG 303

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
               +  Y IEPT+  NVT D  + +EEIFGP+  ++ + TLDE IE        LA  +
Sbjct: 304 NTDRETLY-IEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYL 362

Query: 544 VTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTELK 594
            + +          ++ G   +         P  PFGG   SG+G   GK + D ++  K
Sbjct: 363 FSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKK 422

Query: 595 TVTESP 600
           ++ +  
Sbjct: 423 SILKKS 428

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  119 bits (300), Expect = 7e-29
 Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 4/149 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +  E   +V  +++  VE G +L  GG+R G      +PTV  +V  D K++ EE FGPV
Sbjct: 307 ISEEAAERVERWVEEAVEAGARLLCGGERDGA---LFKPTVLEDVPRDTKLSTEETFGPV 363

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQA 334
             II++   +E I  AN T YGL +GI T +++ A   A  +  G V +N   A      
Sbjct: 364 VPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWM 423

Query: 335 PFGGFKESGIGRELGKAALDEYTELKTVT 363
           PFGG KESG+GRE    A++E TE KTV 
Sbjct: 424 PFGGVKESGVGREGVPYAMEEMTEEKTVV 452

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  119 bits (300), Expect = 7e-29
 Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 3/147 (2%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V E + D FV   VEK+AA  VGDP D +   G  +D     ++ N ++  + QG +
Sbjct: 266 RILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGAR 325

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           +  G +R+G       PTV  +V  D ++  EE FGPV  +I+ K LDE I  +N T YG
Sbjct: 326 VLLGNQRQGA---LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYG 382

Query: 192 LASGIVTTNIDTANTFAHAINAGSVDA 218
           L+SG+ T ++DT       ++ G+V+ 
Sbjct: 383 LSSGVCTNDLDTIKRLVERLDVGTVNV 409

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  118 bits (298), Expect = 1e-28
 Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 12/156 (7%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           INA  +D     +V   +   V  G +LEAGG   G    F  PTV S V        EE
Sbjct: 296 INARQLD-----RVHAIVDDSVAAGARLEAGGTYDG---LFYRPTVLSGVKPGMPAFDEE 347

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
           IFGPV  +  F + +E +  ANDT+YGL++GI++ ++  A   A  +  G + IN  Q V
Sbjct: 348 IFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHIN-DQTV 406

Query: 331 V--PQAPFGGFKESGIGRELGKAA-LDEYTELKTVT 363
              P  PFGG   SG G   G  A  +E+T+ + VT
Sbjct: 407 NDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  114 bits (287), Expect = 5e-27
 Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 4/178 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  VQE + +  ++K  E+ +  +VGDP DK++  G  VD     ++   ++ G  +G 
Sbjct: 293 SRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGA 352

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            +   G     KG F  PT+F+NV    +IA+EEIFGPV  ++ F+T  E +  AN+T Y
Sbjct: 353 DVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPY 412

Query: 191 GLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 248
           GLA+ + + N+  A   A ++ AG V         N   +    GG  E+G  R+G K
Sbjct: 413 GLAASVWSENLSLALEVALSLKAGVVWINGH----NLFDAAAGFGGYRESGFGREGGK 466

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  111 bits (281), Expect = 2e-26
 Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 6/146 (4%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V E I D FV+K   KAAA K+   F   V  G  V A    +V   +   + +G K
Sbjct: 249 RIIVHESIADEFVEKL--KAAAEKL---FAGPVVLGSLVSAAAADRVKELVDDALSKGAK 303

Query: 132 LEAGGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           L  GG   +   G  + PT+  NVT D  I  EE FGPV +II+ K  +E +  AND++Y
Sbjct: 304 LVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEY 363

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL++ + T ++  A   A  I +G+V
Sbjct: 364 GLSAAVFTRDLARALAVAKRIESGAV 389

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  112 bits (282), Expect = 2e-26
 Identities = 53/141 (37%), Positives = 75/141 (53%)

Query: 222 TKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
            +V   +   V  G  +  GGKR    G+F  PTV +++T D ++  EE+FGPV ++ + 
Sbjct: 314 DEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRV 373

Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKE 341
             +DE IE AN T +GL S   T +      F   + AG V+IN      P+ PFGG K 
Sbjct: 374 ADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKR 433

Query: 342 SGIGRELGKAALDEYTELKTV 362
           SG GREL    + E+  +KTV
Sbjct: 434 SGYGRELSAHGIREFCNIKTV 454

Length = 457

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score =  112 bits (282), Expect = 4e-26
 Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 31/235 (13%)

Query: 390 ELGGKSPLVICADADVDMAYYYC----FVCAGSRT------YVQEDIYDTFVKKAVEKAA 439
           E GGK+ +++ + A  + A        F  AG R       Y+QE+I + F++      A
Sbjct: 279 ETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMA 338

Query: 440 ARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS 499
           + KVGDP+D S   GP +D      +  + +    +   L A        GYF+ P +  
Sbjct: 339 SLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEA-WLIAPAPLDDGNGYFVAPGIIE 397

Query: 500 NVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHA 557
            V         E+FGP+  +I+FK   LDE IE  N T YGL  GI + +      +   
Sbjct: 398 IVGIFD--LTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRER 455

Query: 558 INAGS---------AVVPQAPFGGFKESGIGRELGKAA----LDEYTELKTVTES 599
           + AG+         A+V + PFGG+  SG G    KA     L  +   KTV+ +
Sbjct: 456 VEAGNLYINRNITGAIVGRQPFGGWGLSGTGP---KAGGPNYLLRFGNEKTVSLN 507

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  110 bits (278), Expect = 8e-26
 Identities = 54/136 (39%), Positives = 72/136 (52%), Gaps = 3/136 (2%)

Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
           I   V +G  +  GG R+G  G  I PT+   VT D ++A EE FGPV  II+   ++E 
Sbjct: 337 IDDAVAKGATVLNGGGREG--GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEA 394

Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA-PFGGFKESGIGR 346
           IE AN + YGL + I T +I+ A   A A+  G+V IN      P   PF G K+SGIG 
Sbjct: 395 IELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGT 454

Query: 347 ELGKAALDEYTELKTV 362
           +    AL   T  K +
Sbjct: 455 QGIGDALRSMTRRKGI 470

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score =  110 bits (277), Expect = 8e-26
 Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 34/278 (12%)

Query: 349 GKAALD---EYTELKTVT---ESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
            K A+D   E+ ++K V+    +P+  Y   +      +++ KRV    G K+ +V+  D
Sbjct: 202 DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTT-----GSAHGKRVQALGGAKNHMVVMPD 256

Query: 403 AD----VDMAYYYCFVCAGSR-----TYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQ 453
           AD     D      +  AG R       V     D +V +  E+A   ++G   D   + 
Sbjct: 257 ADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRERAEKIRIGPGDDPGAEM 316

Query: 454 GPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY----FIEPTVFSNVTDDFKIAR 509
           GP +  +   +V + I  G  +G ++   G+     GY    ++ PT+   V    K  +
Sbjct: 317 GPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQ 376

Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---- 565
           EEIFGPV  +++  TL+E I   N + YG  + I T +   A  F H I  G   V    
Sbjct: 377 EEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPI 436

Query: 566 ----PQAPFGGFKESGIG--RELGKAALDEYTELKTVT 597
               P   F G+K+S  G     GK     YT  KTVT
Sbjct: 437 PVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVT 474

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score =  109 bits (276), Expect = 9e-26
 Identities = 72/270 (26%), Positives = 104/270 (38%), Gaps = 78/270 (28%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYY------------------YCFVCA 416
           +M AAA  NL  V+LELGGKSP +I  DAD+  A                    Y  V  
Sbjct: 193 VMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPE 251

Query: 417 GSRTYVQEDIYDTFV---KKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGV 473
                      + FV   K AV K       +P   S+     ++   + ++   ++   
Sbjct: 252 DKL--------EEFVAAAKAAVAKMYPTLADNPDYTSI-----INERHYARLQGLLEDAR 298

Query: 474 EQGGKL--------EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 525
            +G ++        +    RK      + PT+  NVTDD ++ +EEIFGP+  I+ + +L
Sbjct: 299 AKGARVIELNPAGEDFAATRK------LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSL 352

Query: 526 DEVIERANDTKYGLA-------------------SGIVTTNIDTANTFAHAINAGSAVVP 566
           DE I+  N     LA                   SG VT N    +T  H          
Sbjct: 353 DEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN----DTLLH------VAQD 402

Query: 567 QAPFGGFKESGIGRELGKAALDEYTELKTV 596
             PFGG   SG+G   GK     ++  K V
Sbjct: 403 DLPFGGVGASGMGAYHGKEGFLTFSHAKPV 432

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  109 bits (275), Expect = 1e-25
 Identities = 52/145 (35%), Positives = 73/145 (50%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V  D+YD F +K V + AA +VGDP D     GP        +V   +   V  G  
Sbjct: 270 RFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGAT 329

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           +  GGKR    G+F  PTV +++T D ++  EE+FGPV ++ +   +DE IE AN T +G
Sbjct: 330 ILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFG 389

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L S   T +      F   + AG V
Sbjct: 390 LGSNAWTRDEAEQERFIDDLEAGQV 414

Length = 457

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score =  110 bits (277), Expect = 1e-25
 Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 44/283 (15%)

Query: 345 GRELGKA-ALDEYTELKTVTESPLRSYTSHS----IMAAAAASNLKRVSLELGGKSPLVI 399
           G E+G+A A D        T  PL S+T  S    ++     +   +  LEL G + +++
Sbjct: 224 GAEIGEAIAKD--------TRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIV 275

Query: 400 CADADVDMAY------------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPF 447
             DAD+ +A               C  C   R  + E IYD  +++ +      K+GDP 
Sbjct: 276 MDDADIQLAVRSVLFAAVGTAGQRCTTC--RRLLLHESIYDDVLEQLLTVYKQVKIGDPL 333

Query: 448 DKSVQQGP---QVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDD 504
           +K    GP       + F K +  IKS   QGGK+  GG     +G F++PT+   ++ D
Sbjct: 334 EKGTLLGPLHTPESKKNFEKGIEIIKS---QGGKILTGGSAIESEGNFVQPTIVE-ISPD 389

Query: 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV 564
             + +EE+FGPV  ++KFKTL+E IE  N    GL+S I T N +T   +   + +   +
Sbjct: 390 ADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGI 449

Query: 565 V----PQ------APFGGFKESGIGRELGKAALDEYTELKTVT 597
           V    P         FGG K +G GRE G  +  +Y    T T
Sbjct: 450 VNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492

Length = 508

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  109 bits (275), Expect = 2e-25
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 3/142 (2%)

Query: 224 VLNYIKSGVEQGGKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
           V   I   + +G +    G         G ++ PTV +NV    ++ REE FGPV  I+K
Sbjct: 309 VRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMK 368

Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFK 340
            K+  E I   ND++YGL + + T +I  A      +  G+V++N    + P   + G K
Sbjct: 369 VKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVK 428

Query: 341 ESGIGRELGKAALDEYTELKTV 362
           +SG G  L +   D+ T  K+ 
Sbjct: 429 DSGRGVTLSRLGYDQLTRPKSY 450

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  109 bits (273), Expect = 3e-25
 Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 7/162 (4%)

Query: 201 IDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNV 260
           +D A T    I+    D      V ++I+ G E  G+L   G+  G     I PT+F +V
Sbjct: 335 LDPATTMGTLIDCAHAD-----SVHSFIREG-ESKGQLLLDGRNAGLAAA-IGPTIFVDV 387

Query: 261 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG 320
             +  ++REEIFGPV  + +F + ++ ++ AND++YGL + + T ++  A+  +  + AG
Sbjct: 388 DPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAG 447

Query: 321 SVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
           SV++N Y       PFGG+K+SG GR+    AL+++TELKT+
Sbjct: 448 SVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489

Length = 494

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  108 bits (272), Expect = 3e-25
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 2/145 (1%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R +V  +I D F ++    A    VGDP D   + GP +      +V  ++   V  G +
Sbjct: 270 RVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGAR 329

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           L  GGKR  D  Y   PTV  +   D K++ +EIFGPV  +  +  LDE I +AN     
Sbjct: 330 LLCGGKRLSDTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVA 387

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
             + + T ++D A      ++A +V
Sbjct: 388 FQAAVFTKDLDVALKAVRRLDATAV 412

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score =  108 bits (272), Expect = 4e-25
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 1/136 (0%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V E IYD  +++  +     ++GDP D     GP          L  I+    QGG 
Sbjct: 283 RLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGT 342

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           +  GGK     G ++EPT+      D  I +EE F P+  ++KF TL+E I   N+   G
Sbjct: 343 VLFGGKVIDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQG 401

Query: 192 LASGIVTTNIDTANTF 207
           L+S I TT++  A  +
Sbjct: 402 LSSSIFTTDLRNAFRW 417

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  107 bits (270), Expect = 5e-25
 Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 13/144 (9%)

Query: 226 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 285
           N ++  + QG ++  G +R+G       PTV  +V  D ++  EE FGPV  +I+ K LD
Sbjct: 314 NRVEEAIAQGARVLLGNQRQGA---LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLD 370

Query: 286 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ-----APFGGFK 340
           E I  +N T YGL+SG+ T ++DT       ++ G+V +N     VP      +PFGG K
Sbjct: 371 EAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVN----EVPGFRSELSPFGGVK 426

Query: 341 ESGIG-RELGKAALDEYTELKTVT 363
           +SG+G +E  + A+ E T +KT +
Sbjct: 427 DSGLGGKEGVREAMKEMTNVKTYS 450

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  108 bits (270), Expect = 7e-25
 Identities = 52/145 (35%), Positives = 81/145 (55%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +D +   KV  +I   +E+G ++  GGK     G F +PT+  +V  + K+A+EE FGP+
Sbjct: 332 IDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPL 391

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
             + +FK   +VI +ANDT++GLA+     ++        A+  G V IN        AP
Sbjct: 392 APLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAP 451

Query: 336 FGGFKESGIGRELGKAALDEYTELK 360
           FGG K SG+GRE  K  +++Y E+K
Sbjct: 452 FGGIKASGLGREGSKYGIEDYLEIK 476

Length = 482

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  106 bits (266), Expect = 2e-24
 Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 2/151 (1%)

Query: 68  AYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE 127
           A  +R  V    YD  V  A     + K GDP D     GP + A    +V +Y+   V 
Sbjct: 286 AITTRLVVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVA 345

Query: 128 QGGKLEAGGKRKGDK--GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
           +GG+   GG R  D+  G+F+EPTV + + ++ ++AREEIFGPV T+I     D+ +  A
Sbjct: 346 EGGRFACGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIA 405

Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           ND+ YGL+  +   + + A   A  +  G+V
Sbjct: 406 NDSPYGLSGTVFGADPERAAAVAARVRTGTV 436

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  105 bits (265), Expect = 3e-24
 Identities = 37/53 (69%), Positives = 45/53 (84%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M AWK  PALA G  V+LKPAEQTPLTALY+A+L ++AGFP GV++V+PGYGP
Sbjct: 161 MAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGP 213

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  105 bits (264), Expect = 3e-24
 Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  VQ  I D    +   + AA KVG   D +   GP +D     +V   ++  +  G 
Sbjct: 265 SRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGA 324

Query: 131 K-LEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
           + +  GG       KG F+ PT+      D  I +EEIFGPV T+  F    E +  AND
Sbjct: 325 EVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALAND 384

Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
           T YGLA+ + T ++  A   A AI AG+V
Sbjct: 385 TDYGLAASVWTRDLARAMRVARAIRAGTV 413

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 8e-24
 Identities = 73/242 (30%), Positives = 112/242 (46%), Gaps = 31/242 (12%)

Query: 387 VSLELGGKSPLVICADADVDMAYYYC----FVCAGSR------TYVQEDIYDTFVKKAVE 436
           + +ELGGK   ++  DAD+D+A        F  +G R        V E + D  V+K   
Sbjct: 261 LQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNA 320

Query: 437 KAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGV----EQGGKLEAGGKRKGDKGYF 492
           K A   VG P D        +   +     N+I+  V    E+G       KR+G+    
Sbjct: 321 KVAKLTVGPPEDDC-----DITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGN---L 372

Query: 493 IEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTAN 552
           I P +  NV  D +IA EE FGPV  +I+  +++E I   N + +GL   + T +I+ A 
Sbjct: 373 IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAI 432

Query: 553 TFAHAINAGSAVVPQA--------PFGGFKESGIGRELGKAALDEYTELK-TVTESPLRS 603
             + A+  G+  +  A        PF G K+SGIG +    +++  T++K TV   P  S
Sbjct: 433 LISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPKPS 492

Query: 604 YT 605
           YT
Sbjct: 493 YT 494

Length = 496

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score =  104 bits (261), Expect = 1e-23
 Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 26/242 (10%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGSR------TYVQE 424
           ++  AAA NL   +LELGGKSP+++    ++ +A        F+ AG          V  
Sbjct: 200 LVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHR 259

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I D F++ A+++A     G+   KS      V+     ++   IK   + GGK+  GG+
Sbjct: 260 SIKDKFIE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGE 315

Query: 485 -RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
               +K  ++ PT+  N   D  + +EEIFGP+  I+ ++ +DEV+E  N     LA   
Sbjct: 316 VDIENK--YVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYY 373

Query: 544 VTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTELK 594
              +           ++G+ V+         P  PFGG   SG+G   GK   D ++  K
Sbjct: 374 FGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPK 433

Query: 595 TV 596
            V
Sbjct: 434 PV 435

Length = 493

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score =  103 bits (258), Expect = 2e-23
 Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVD---AVMFTKVLNYIKSGVEQ 128
           R  VQE + D F +  VEK  A + GDP D SV  G  +D   A++F   +N     + Q
Sbjct: 285 RMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVN---EAIAQ 341

Query: 129 GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
           G +L  G  R G       PTV   V     + REE FGPV  +I+F  +D+ I  +N T
Sbjct: 342 GARLLLGNVRDGA---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNST 398

Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSVD 217
            YGL+SG+ T  +D    F   +  G+V+
Sbjct: 399 AYGLSSGVCTNRLDYITRFIAELQVGTVN 427

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  102 bits (257), Expect = 3e-23
 Identities = 36/53 (67%), Positives = 46/53 (86%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           MLAWK  PALAAG  V+LKPAEQTPL+ALY+A L ++AGFP GV++++PG+GP
Sbjct: 157 MLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGP 209

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score =  102 bits (256), Expect = 3e-23
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 28/227 (12%)

Query: 385 KRVSLELGGKSPLVICADADVDMAYYY----CFVCAG------SRTYVQEDIY-DTFVKK 433
           K ++LE+GG +PLV+   AD+D A Y      F+ AG       R  V +    D F+++
Sbjct: 201 KILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLER 260

Query: 434 AVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
            VE A   ++G P  +    GP + A    + L   +  +  GG+     +R      F+
Sbjct: 261 LVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFL 320

Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
            P +  +VTD   +  EEIFGP+  + ++   DE I  AN T++GL++G+++ +      
Sbjct: 321 SPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFER 379

Query: 554 FAHAINAG------------SAVVPQAPFGGFKESGIGRELGKAALD 588
           F   I AG            S     APFGG   SG  R     A D
Sbjct: 380 FLARIRAGIVNWNRPTTGASST----APFGGVGLSGNHRPSAYYAAD 422

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  100 bits (251), Expect = 6e-23
 Identities = 32/68 (47%), Positives = 45/68 (66%)

Query: 149 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 208
           TV  +V  D  IA+EEIFGPV  +I+FK  +E I  ANDT+YGL +G+ T +++ A   A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316

Query: 209 HAINAGSV 216
             + AG+V
Sbjct: 317 ERLRAGTV 324

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 2e-22
 Identities = 51/135 (37%), Positives = 78/135 (57%)

Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
           +++ + +G +L  GG++    G +  PTV +NVT +    REE+FGPV  I   K  +  
Sbjct: 323 VEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHA 382

Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRE 347
           +E AND+++GL++ I TT+   A   A  +  G V+IN Y A   +  FGG K+SG GRE
Sbjct: 383 LELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRE 442

Query: 348 LGKAALDEYTELKTV 362
           L    L E+  ++TV
Sbjct: 443 LSHFGLHEFCNIQTV 457

Length = 462

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score = 99.6 bits (249), Expect = 2e-22
 Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 32/244 (13%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC-------FVCAG----SRTYV- 422
           I+  AAA +L  V+LELGGKSP  +    D+D+A           F+ AG    +  YV 
Sbjct: 191 IVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVA---ARRIAWGKFINAGQTCIAPDYVL 247

Query: 423 -QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
              ++ + FV+   +K      G+   +S   G  ++   F ++   +      GGK+  
Sbjct: 248 CTPEVQEKFVEAL-KKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS-----GGKVAI 301

Query: 482 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
           GG +  +K  +I PTV ++V     + +EEIFGP+  I+    LDE IE  N  +  LA 
Sbjct: 302 GG-QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLAL 360

Query: 542 GIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIGRELGKAALDEYTE 592
            + + N    N      ++G            +   PFGG   SG+G   GK + D ++ 
Sbjct: 361 YVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSH 420

Query: 593 LKTV 596
            ++ 
Sbjct: 421 KRSC 424

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score = 98.8 bits (247), Expect = 4e-22
 Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 3/149 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           V+   F ++   +   V +G K+E GG+    + Y I PTV +NVT D KI +EEIFGPV
Sbjct: 284 VNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRY-IAPTVLTNVTPDMKIMQEEIFGPV 342

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQ 333
             II ++ LDEVIE  N     LA  + + +    N      ++G V +N      + P 
Sbjct: 343 LPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPN 402

Query: 334 APFGGFKESGIGRELGKAALDEYTELKTV 362
            PFGG   SGIG   G      ++  + V
Sbjct: 403 LPFGGVNNSGIGSYHGVYGFKAFSHERAV 431

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 99.6 bits (249), Expect = 5e-22
 Identities = 70/222 (31%), Positives = 99/222 (44%), Gaps = 29/222 (13%)

Query: 383 NLKRVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTF 430
              R+  E GGK+  ++   ADVD         A+ Y    C     SR YV E ++   
Sbjct: 277 TYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAA--SRAYVPESLWPEV 334

Query: 431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDK 489
            ++ +E+    K+GDP D S   G  +D + F ++  YI         ++ AGGK     
Sbjct: 335 KERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSV 394

Query: 490 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF--KTLDEVIERANDT-KYGLASGIVTT 546
           GYF+EPTV        K+  EEIFGPV T+  +     +E +E  + T  Y L   I   
Sbjct: 395 GYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQ 454

Query: 547 N---IDTA-NTFAHA-----INAGS--AVVPQAPFGGFKESG 577
           +   I  A +   +A     IN     AVV Q PFGG + SG
Sbjct: 455 DRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 96.1 bits (240), Expect = 3e-21
 Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 3/131 (2%)

Query: 234 QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 293
             GK+  GG+   ++ Y I PT+  +V+ D  + +EEIFGP+  I+ +  LDE IE  N 
Sbjct: 295 DDGKVVIGGQVDKEERY-IAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINS 353

Query: 294 TKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKA 351
               LA  + + +           ++G V +N     A +P  PFGG   SG+G   GKA
Sbjct: 354 RPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKA 413

Query: 352 ALDEYTELKTV 362
             D ++ LK+V
Sbjct: 414 GFDTFSHLKSV 424

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 96.9 bits (241), Expect = 3e-21
 Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 7/148 (4%)

Query: 223 KVLNYIKSGVEQGGKLEAGGKRKGDKGY----FIEPTVFSNVTDDFKIAREEIFGPVQTI 278
           +V + I  G  +G ++   G+     GY    ++ PT+   V    K  +EEIFGPV  +
Sbjct: 327 RVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCV 386

Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFG 337
           ++  TL+E I   N + YG  + I T +   A  F H I  G V +N    V +P   F 
Sbjct: 387 LEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFT 446

Query: 338 GFKESGIG--RELGKAALDEYTELKTVT 363
           G+K+S  G     GK     YT  KTVT
Sbjct: 447 GWKDSFFGDHHIYGKQGTHFYTRGKTVT 474

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 95.6 bits (238), Expect = 6e-21
 Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 222 TKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
            +V  ++   V  G +L  GGKR  D  Y   PTV  +   D K++ +EIFGPV  +  +
Sbjct: 314 DRVEEWVNEAVAAGARLLCGGKRLSDTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSY 371

Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFGGFK 340
             LDE I +AN       + + T ++D A      ++A +V +N + A  V   PF G +
Sbjct: 372 DDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRR 431

Query: 341 ESGIG 345
           +SG G
Sbjct: 432 QSGYG 436

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score = 95.2 bits (237), Expect = 8e-21
 Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 27/244 (11%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAY-------YYCFVCAG----SRTYV- 422
           I+ AAAA +L  V+LELGGK P+++ +  D+ +A        + C    G    +  YV 
Sbjct: 192 IIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC--NNGQACIAPDYVL 249

Query: 423 -QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
            +E    T +  A++    +  G+   +S      V++  F ++   +        K+  
Sbjct: 250 VEESFAPTLID-ALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVAD-KIVH 307

Query: 482 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
           GG+R     Y IEPT+  +   D  I  EEIFGP+  II  K ++E IE  N     LA+
Sbjct: 308 GGERDEKNLY-IEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAA 366

Query: 542 GIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTE 592
            + T N +         ++G                PFGG  ESG G   GK + D ++ 
Sbjct: 367 YVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSH 426

Query: 593 LKTV 596
            K V
Sbjct: 427 KKAV 430

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 95.6 bits (237), Expect = 1e-20
 Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 23/253 (9%)

Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGSRTYVQE 424
           S T+   + A AA+  KR+   +G K+  ++  DA++D          F  AG R     
Sbjct: 336 SNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALS 395

Query: 425 DIY-----DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKL 479
            +       ++  K VE+A A KV    +     GP +  +   ++   I+SGV+ G KL
Sbjct: 396 TVVFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKL 455

Query: 480 EAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535
              G+       +KG FI PT+ S VT D +  +EEIFGPV   ++  + DE I   N  
Sbjct: 456 LLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKN 515

Query: 536 KYGLASGIVTTNIDTANTFAHAINAGS--------AVVPQAPFGGFKESGIG--RELGKA 585
           KYG  + I T++   A  F   I AG           +P   F G K S  G     GKA
Sbjct: 516 KYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKA 575

Query: 586 ALDEYTELKTVTE 598
            +D +T++K VT+
Sbjct: 576 GVDFFTQIKLVTQ 588

Length = 604

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 94.1 bits (234), Expect = 2e-20
 Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 25/189 (13%)

Query: 181 VIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEA 240
           ++E+    +YG         +D +      I+  +  A +F   +N     + QG +L  
Sbjct: 300 LVEKTRAWRYG-------DPMDPSVDMGTVIDEAA--AILFEARVN---EAIAQGARLLL 347

Query: 241 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 300
           G  R G       PTV   V     + REE FGPV  +I+F  +D+ I  +N T YGL+S
Sbjct: 348 GNVRDGA---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSS 404

Query: 301 GIVTTNIDTANTFAHAINAGSVWINCYQAVVP-----QAPFGGFKESGIGRELG-KAALD 354
           G+ T  +D    F   +  G+V  N ++  VP       PFGG K+SG+G + G + A+ 
Sbjct: 405 GVCTNRLDYITRFIAELQVGTV--NVWE--VPGYRLELTPFGGIKDSGLGYKEGVQEAMK 460

Query: 355 EYTELKTVT 363
            +T LKT +
Sbjct: 461 SFTNLKTYS 469

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 93.5 bits (232), Expect = 4e-20
 Identities = 41/126 (32%), Positives = 75/126 (59%)

Query: 237 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 296
           K+  GG+++   GY+  PT+ +    D  I ++E+FGPV +I  F   ++V+  AND++Y
Sbjct: 344 KVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQY 403

Query: 297 GLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEY 356
           GLAS + T ++  A+  +  +  G  W+N +  +V + P GG K SG G+++    L++Y
Sbjct: 404 GLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDY 463

Query: 357 TELKTV 362
           T ++ +
Sbjct: 464 TVVRHI 469

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 93.4 bits (233), Expect = 5e-20
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 5/145 (3%)

Query: 74  YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
           Y+QE+I + F++      A+ KVGDP+D S   GP +D      +  + +    +   L 
Sbjct: 320 YLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEA-WLI 378

Query: 134 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYG 191
           A        GYF+ P +   V         E+FGP+  +I+FK   LDE IE  N T YG
Sbjct: 379 APAPLDDGNGYFVAPGIIEIVGIFD--LTTEVFGPILHVIRFKAEDLDEAIEDINATGYG 436

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L  GI + +      +   + AG++
Sbjct: 437 LTLGIHSRDEREIEYWRERVEAGNL 461

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 92.7 bits (230), Expect = 8e-20
 Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 8/167 (4%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           +R  ++E I D F+    ++A   + G P D +   G  +D      V ++I+ G E  G
Sbjct: 306 TRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREG-ESKG 364

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           +L   G+  G     I PT+F +V  +  ++REEIFGPV  + +F + ++ ++ AND++Y
Sbjct: 365 QLLLDGRNAGLAAA-IGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQY 423

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV------DAEMFTKVLNYIKSG 231
           GL + + T ++  A+  +  + AGSV      D +M      Y +SG
Sbjct: 424 GLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSG 470

Length = 494

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 91.6 bits (227), Expect = 1e-19
 Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG- 130
           R Y Q  IYDT V+K     A  K G P D+S + GP        +V+  ++     G  
Sbjct: 284 RIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHI 343

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           K+  GG+++   GY+  PT+ +    D  I ++E+FGPV +I  F   ++V+  AND++Y
Sbjct: 344 KVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQY 403

Query: 191 GLASGIVTTNIDTANTFAHAINAG 214
           GLAS + T ++  A+  +  +  G
Sbjct: 404 GLASSVWTKDVGRAHRLSARLQYG 427

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 91.9 bits (229), Expect = 1e-19
 Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 13/127 (10%)

Query: 247 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVT 304
             GYF+ P +   V         E+FGP+  +I+FK   LDE IE  N T YGL  GI +
Sbjct: 386 GNGYFVAPGIIEIVGIFD--LTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHS 443

Query: 305 TNIDTANTFAHAINAGSVWINCYQ--AVVPQAPFGGFKESGIGRELGKAA----LDEYTE 358
            +      +   + AG+++IN     A+V + PFGG+  SG G    KA     L  +  
Sbjct: 444 RDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGP---KAGGPNYLLRFGN 500

Query: 359 LKTVTES 365
            KTV+ +
Sbjct: 501 EKTVSLN 507

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 91.8 bits (228), Expect = 1e-19
 Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 24/215 (11%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGP---QVDAVMFTKVLNYIKSGVEQ 128
           R  + E IYD  +++ +      K+GDP +K    GP         F K +  IKS   Q
Sbjct: 305 RLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS---Q 361

Query: 129 GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
           GGK+  GG     +G F++PT+   ++ D  + +EE+FGPV  ++KFKTL+E IE  N  
Sbjct: 362 GGKILTGGSAIESEGNFVQPTIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSV 420

Query: 189 KYGLASGIVTTNIDTANTF--AHAINAGSVDAEMFTKVLNYIKSGVEQGG-----KLEAG 241
             GL+S I T N +T   +      + G V+  + T       +G E GG     K   G
Sbjct: 421 PQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPT-------NGAEIGGAFGGEKATGG 473

Query: 242 GKRKGD---KGYFIEPTVFSNVTDDFKIAREEIFG 273
           G+  G    K Y    T   N  ++  +A+   FG
Sbjct: 474 GREAGSDSWKQYMRRSTCTINYGNELPLAQGINFG 508

Length = 508

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 91.9 bits (229), Expect = 1e-19
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 31/218 (14%)

Query: 385 KRVSLELGGKSPLVICADADVDMAYYY----CFVCAG------SRTYVQEDIY-DTFVKK 433
           K ++LE+GG +PLVI   AD+D A +      F+ AG       R  V +    D F+ +
Sbjct: 238 KILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLAR 297

Query: 434 AVEKAAARKVGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK-LEAGGKRKGDKGY 491
            V  A    VG    +     G  +  +    ++      +  GGK L    + +   G 
Sbjct: 298 LVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTG- 356

Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA 551
            + P +  +VT   ++  EE FGP+  ++++   DE I  AN+T++GL++G+++ + +  
Sbjct: 357 LLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDY 415

Query: 552 NTFAHAINAG------------SAVVPQAPFGGFKESG 577
           + F   I AG            SA    APFGG   SG
Sbjct: 416 DQFLLEIRAGIVNWNKPLTGASSA----APFGGVGASG 449

Length = 487

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score = 90.0 bits (224), Expect = 3e-19
 Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 11/162 (6%)

Query: 205 NTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF 264
             +   +N        F ++ + +       GK+  GG+       FI PT+ S+V+ D 
Sbjct: 284 PDYTRIVNPRH-----FNRLKSLLD---TTKGKVVIGGEMDEAT-RFIPPTIVSDVSWDD 334

Query: 265 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWI 324
            +  EE+FGPV  IIK   LDE I+  N     LA  I T +    +       +G V I
Sbjct: 335 SLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVI 394

Query: 325 N-CYQAV-VPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 364
           N     V V  APFGG  +SG G   GK   D +T  +TV +
Sbjct: 395 NDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVVK 436

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 91.4 bits (228), Expect = 4e-19
 Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 16/172 (9%)

Query: 421  YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
            +VQEDI D  ++      A  KVGDP   S   GP +DAE    +  +I+  +++  +L 
Sbjct: 837  FVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKREARLL 895

Query: 481  AGGK--RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTK 536
            A        + G+F+ PT F    D       E+FGP+  +I++K   LD+VI+  N T 
Sbjct: 896  AQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATG 953

Query: 537  YGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIG 579
            YGL  GI +   +TA+  A  +  G+         AVV   PFGG   SG G
Sbjct: 954  YGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTG 1005

Length = 1038

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 89.6 bits (222), Expect = 6e-19
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 81  DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKG 140
           D +V +  E+A   ++G   D   + GP +      +V + I  G  +G ++   G+   
Sbjct: 291 DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYK 350

Query: 141 DKGY----FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 196
             GY    ++ PT+   V    K  +EEIFGPV  +++  TL+E I   N + YG  + I
Sbjct: 351 VDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAI 410

Query: 197 VTTNIDTANTFAHAINAGSV 216
            T +   A  F H I  G V
Sbjct: 411 FTRDGAAARRFQHEIEVGQV 430

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 88.8 bits (221), Expect = 1e-18
 Identities = 54/159 (33%), Positives = 74/159 (46%), Gaps = 15/159 (9%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
               +VD   +   +   KS   QGG +  GGK     G ++EPT+      D  I +EE
Sbjct: 321 HTKAAVD--NYLAAIEEAKS---QGGTVLFGGKVIDGPGNYVEPTIVE-GLSDAPIVKEE 374

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS------VWI 324
            F P+  ++KF TL+E I   N+   GL+S I TT++  A  +      GS      V I
Sbjct: 375 TFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGP--KGSDCGIVNVNI 432

Query: 325 NCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
               A +  A FGG KE+G GRE G  A  +Y    T T
Sbjct: 433 GTSGAEIGGA-FGGEKETGGGRESGSDAWKQYMRRSTCT 470

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score = 88.0 bits (219), Expect = 2e-18
 Identities = 30/53 (56%), Positives = 39/53 (73%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           + AWK  PALAAG  V+LKP+E TPLTAL +A L ++AG P GV++V+ G G 
Sbjct: 142 LAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEAGLPPGVLNVVTGSGS 194

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score = 87.5 bits (218), Expect = 3e-18
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           M+  K  PALAAGC V+LKPAE+TPL+AL +A L ++AG P GV++V+ G
Sbjct: 133 MITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTG 182

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 87.2 bits (216), Expect = 3e-18
 Identities = 49/149 (32%), Positives = 80/149 (53%)

Query: 68  AYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE 127
           A   R  ++E I   F ++ V  AAA K+GDP D+    GP     +  ++ + +++ + 
Sbjct: 269 AAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLA 328

Query: 128 QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
           +G +L  GG++    G +  PTV +NVT +    REE+FGPV  I   K  +  +E AND
Sbjct: 329 EGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELAND 388

Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
           +++GL++ I TT+   A   A  +  G V
Sbjct: 389 SEFGLSATIFTTDETQARQMAARLECGGV 417

Length = 462

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score = 86.5 bits (215), Expect = 5e-18
 Identities = 29/53 (54%), Positives = 40/53 (75%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           +LA K  PALAAG  V+LKP+E TP + L +A L ++AGFP GV++V+ G+GP
Sbjct: 135 LLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGP 187

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score = 86.8 bits (216), Expect = 5e-18
 Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 13/162 (8%)

Query: 207 FAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI 266
           +   IN        F ++   +       GK+  GG    +  Y IEPT+  NVT D  +
Sbjct: 278 YGRIINEKH-----FDRLAGLLD-----NGKIVFGGNTDRETLY-IEPTILDNVTWDDPV 326

Query: 267 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN- 325
            +EEIFGP+  ++ + TLDE IE        LA  + + +          ++ G   IN 
Sbjct: 327 MQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIND 386

Query: 326 -CYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESP 366
                  P  PFGG   SG+G   GK + D ++  K++ +  
Sbjct: 387 TIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKS 428

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score = 86.4 bits (214), Expect = 6e-18
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M AWK GPALA G  ++LKPAEQTPL+AL  A L  +AG PDGV++++ G+GP
Sbjct: 157 MFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGP 209

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 86.8 bits (215), Expect = 7e-18
 Identities = 70/225 (31%), Positives = 101/225 (44%), Gaps = 34/225 (15%)

Query: 383 NLKRVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTF 430
           N  R+  E GGK   V+   ADV+         A+ Y    C  C  SR YV   ++  F
Sbjct: 276 NFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSAC--SRLYVPHSLWPRF 333

Query: 431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE--AGGKRKGD 488
             + + + +  KVGDP D     G  +D + F K++ YI+        L   AGGK    
Sbjct: 334 KGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDS 393

Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIERANDTKYGLASGI 543
            GYF+EPTV  +      + +EEIFGPV T+      K+K + ++++    T YGL   +
Sbjct: 394 VGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDST--TSYGLTGAV 451

Query: 544 VTTNIDTANTFAHAIN--AGS---------AVVPQAPFGGFKESG 577
              + D        +   AG+         AVV Q PFGG + SG
Sbjct: 452 FAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score = 85.4 bits (212), Expect = 1e-17
 Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 8/118 (6%)

Query: 74  YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQ----VDAVMFTKVLNYIKSGVEQG 129
           +V E + D FV+  ++    +  G   D + +  P     V+   F ++   +   V +G
Sbjct: 247 FVHESVKDAFVE-HLKAEIEKFYGK--DAARKASPDLARIVNDRHFDRLKGLLDDAVAKG 303

Query: 130 GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
            K+E GG+    + Y I PTV +NVT D KI +EEIFGPV  II ++ LDEVIE  N 
Sbjct: 304 AKVEFGGQFDAAQRY-IAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINA 360

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 1e-17
 Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 226 NYIKSGV----EQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
           N+I+  V    E+G       KR+G+    I P +  NV  D +IA EE FGPV  +I+ 
Sbjct: 346 NFIEGLVMDAKEKGATFCQEWKREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402

Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP-QAPFGGFK 340
            +++E I   N + +GL   + T +I+ A   + A+  G+V IN   A  P   PF G K
Sbjct: 403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLK 462

Query: 341 ESGIGRELGKAALDEYTELK-TVTESPLRSYT 371
           +SGIG +    +++  T++K TV   P  SYT
Sbjct: 463 DSGIGSQGITNSINMMTKVKSTVINLPKPSYT 494

Length = 496

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score = 85.0 bits (211), Expect = 2e-17
 Identities = 30/53 (56%), Positives = 38/53 (71%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           + AWK  PALAAG  V+LKP+E TPLTAL +A L  +AG P GV++V+ G G 
Sbjct: 112 LAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGD 164

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score = 83.3 bits (206), Expect = 8e-17
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M   K  PALAAGC +++KPAEQTPL+AL+ A L + AG PDGVI+V+ G+GP
Sbjct: 174 MFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGP 226

Length = 501

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score = 83.2 bits (206), Expect = 8e-17
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M AWK  PALAAG  V++KPAE TPL+ LY A L ++AGFP GV++++PGYG 
Sbjct: 160 MAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGA 212

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 83.6 bits (206), Expect = 8e-17
 Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 7/149 (4%)

Query: 223 KVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
           ++   I+SGV+ G KL   G+       +KG FI PT+ S VT D +  +EEIFGPV   
Sbjct: 440 RICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVC 499

Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFG 337
           ++  + DE I   N  KYG  + I T++   A  F   I AG + IN    V +P   F 
Sbjct: 500 MQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFT 559

Query: 338 GFKESGIG--RELGKAALDEYTELKTVTE 364
           G K S  G     GKA +D +T++K VT+
Sbjct: 560 GNKASFAGDLNFYGKAGVDFFTQIKLVTQ 588

Length = 604

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 84.1 bits (209), Expect = 9e-17
 Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 22/175 (12%)

Query: 421 YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG 477
            +QED+ D   T +K A+      ++GDP+  S   GP +DAE    +  +I++    G 
Sbjct: 829 CLQEDVADRVLTMLKGAM---DELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGR 885

Query: 478 KLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERAND 534
            +         +KG F+ PT+     D       E+FGPV  +++FK   LD VI+  N 
Sbjct: 886 LVHQLPLPAETEKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDINA 943

Query: 535 TKYGLASGIVTTNID-TANTFAHAINAGS---------AVVPQAPFGGFKESGIG 579
           T YGL  G+  + ID T       I AG+         AVV   PFGG   SG G
Sbjct: 944 TGYGLTFGL-HSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997

Length = 1208

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 82.5 bits (204), Expect = 1e-16
 Identities = 32/53 (60%), Positives = 40/53 (75%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M AWK GPALA G  ++LK AEQTPL+ALY A L  +AG P GV++V+ G+GP
Sbjct: 211 MFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGP 263

Length = 538

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score = 81.5 bits (202), Expect = 1e-16
 Identities = 32/53 (60%), Positives = 40/53 (75%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           + AWK  PALAAG  V+LKP+E TPLTAL +A L Q+AG P GV++V+PG G 
Sbjct: 108 LAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGD 160

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 2e-16
 Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M AWK  PALAAG  V+LKP+E TPLTAL +A L      P GV++V+ G G 
Sbjct: 154 MAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGA 205

Length = 475

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score = 81.7 bits (202), Expect = 2e-16
 Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 241 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 300
           GG+R     Y IEPT+  +   D  I  EEIFGP+  II  K ++E IE  N     LA+
Sbjct: 308 GGERDEKNLY-IEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAA 366

Query: 301 GIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKAALDEYTE 358
            + T N +         ++G V  N    Q  +   PFGG  ESG G   GK + D ++ 
Sbjct: 367 YVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSH 426

Query: 359 LKTV 362
            K V
Sbjct: 427 KKAV 430

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score = 80.9 bits (200), Expect = 3e-16
 Identities = 31/52 (59%), Positives = 39/52 (75%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
             AWK  PALAAG  V+LKPAE TPL+AL +A L  +AGFP GV++V+ G+G
Sbjct: 133 FAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFG 184

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 80.9 bits (200), Expect = 7e-16
 Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 26/192 (13%)

Query: 413 FVCAGSRT------YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFT 463
           F  AG R        +QED+ D   T +K A+   A  +VG+P   +   GP +DAE   
Sbjct: 375 FDSAGQRCSALRVLCLQEDVADRILTMLKGAM---AELRVGNPDRLTTDVGPVIDAEAKA 431

Query: 464 KVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 522
            +  +I++   +G  +          KG F+ PT+     ++    + E+FGPV  ++++
Sbjct: 432 NIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE--LENLDELQREVFGPVLHVVRY 489

Query: 523 KT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFG 571
           K   LDEVI++ N T YGL  G+ T   +T        +AG+         AVV   PFG
Sbjct: 490 KRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFG 549

Query: 572 GFKESGIGRELG 583
           G   SG G + G
Sbjct: 550 GEGLSGTGPKAG 561

Length = 769

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 79.1 bits (195), Expect = 1e-15
 Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 17/153 (11%)

Query: 219 EMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
           + F K +  IKS   QGGK+  GG     +G F++PT+   ++ D  + +EE+FGPV  +
Sbjct: 349 KNFEKGIEIIKS---QGGKILTGGSAIESEGNFVQPTIVE-ISPDADVVKEELFGPVLYV 404

Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTF--AHAINAGSVWINCYQAVVPQ--- 333
           +KFKTL+E IE  N    GL+S I T N +T   +      + G V +N     +P    
Sbjct: 405 MKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVN-----IPTNGA 459

Query: 334 ---APFGGFKESGIGRELGKAALDEYTELKTVT 363
                FGG K +G GRE G  +  +Y    T T
Sbjct: 460 EIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492

Length = 508

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score = 79.3 bits (196), Expect = 1e-15
 Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 235 GGKLEAGGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 293
           GGK+  GG+    +K  ++ PT+  N   D  + +EEIFGP+  I+ ++ +DEV+E  N 
Sbjct: 307 GGKVVYGGEVDIENK--YVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINS 364

Query: 294 TKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKA 351
               LA      +           ++G+V IN   +  + P  PFGG   SG+G   GK 
Sbjct: 365 RPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKY 424

Query: 352 ALDEYTELKTV 362
             D ++  K V
Sbjct: 425 GFDTFSHPKPV 435

Length = 493

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 78.8 bits (194), Expect = 2e-15
 Identities = 28/49 (57%), Positives = 41/49 (83%)

Query: 4   WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           WK GPALAAG  V+LKP+E++PL+A+ +A L ++AG PDGV++V+ G+G
Sbjct: 176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFG 224

Length = 494

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 78.8 bits (194), Expect = 2e-15
 Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 30/195 (15%)

Query: 413 FVCAGSRT------YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFT 463
           F  AG R        VQED+ D   T ++ A+++    KVG P   +   GP +DAE   
Sbjct: 299 FDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQEL---KVGVPHLLTTDVGPVIDAEAKQ 355

Query: 464 KVLNYIKSGVEQGGKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 519
            +L +I+  + Q  K  A            G F+ PT+F    DD     EE+FGPV  +
Sbjct: 356 NLLAHIEH-MSQTQKKIAQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEEVFGPVLHV 412

Query: 520 IKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS---------AVVPQA 568
           +++K   LD+++++ N T YGL  G+ +    T          G+         AVV   
Sbjct: 413 VRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQ 472

Query: 569 PFGGFKESGIGRELG 583
           PFGG   SG G + G
Sbjct: 473 PFGGQGLSGTGPKAG 487

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 77.9 bits (192), Expect = 4e-15
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 12/146 (8%)

Query: 75  VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGV----EQGG 130
           V E + D  V+K   K A   VG P D        +  V+     N+I+  V    E+G 
Sbjct: 306 VMESVADALVEKVNAKVAKLTVGPPEDDC-----DITPVVSESSANFIEGLVMDAKEKGA 360

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
                 KR+G+    I P +  NV  D +IA EE FGPV  +I+  +++E I   N + +
Sbjct: 361 TFCQEWKREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNF 417

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL   + T +I+ A   + A+  G+V
Sbjct: 418 GLQGCVFTRDINKAILISDAMETGTV 443

Length = 496

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 77.6 bits (192), Expect = 5e-15
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 4/130 (3%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR YV E ++    ++ +E+    K+GDP D S   G  +D   F ++  YI        
Sbjct: 322 SRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPE 381

Query: 131 -KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF--KTLDEVIERAND 187
            ++ AGGK     GYF+EPTV        K+  EEIFGPV T+  +     +E +E  + 
Sbjct: 382 AEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDT 441

Query: 188 T-KYGLASGI 196
           T  Y L   I
Sbjct: 442 TSPYALTGAI 451

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 78.3 bits (194), Expect = 5e-15
 Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 7/147 (4%)

Query: 74  YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
           +VQEDI D  ++      A  KVGDP   S   GP +DA     +  +I+  +++  +L 
Sbjct: 837 FVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKREARLL 895

Query: 134 AGGK--RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTK 189
           A        + G+F+ PT F    D       E+FGP+  +I++K   LD+VI+  N T 
Sbjct: 896 AQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATG 953

Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
           YGL  GI +   +TA+  A  +  G+V
Sbjct: 954 YGLTLGIHSRIEETADRIADRVRVGNV 980

Length = 1038

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 77.3 bits (191), Expect = 6e-15
 Identities = 28/51 (54%), Positives = 37/51 (72%)

Query: 2   LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           +A K GPA+AAG  V+LKPA QTPL+AL +A L  +AG P G ++V+ G G
Sbjct: 140 VAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSG 190

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 77.1 bits (190), Expect = 7e-15
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)

Query: 385 KRVSLELGGKSPLVICADADVDMAYYY----CFVCAGSRT------YVQEDIY-DTFVKK 433
           K ++LE+GG +PL++   AD+D A +      F+ AG R        V +    D F+ +
Sbjct: 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLAR 295

Query: 434 AVEKAAARKVGDPFDKSVQ--QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
            VE A    VG  +D   Q   G  +  +   ++L      +  GGK     ++      
Sbjct: 296 LVEVAERLTVGA-WDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAA 354

Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA 551
            + P +  +VT   ++  EE FGP+  +I++   DE I  AN+T++GL++G+++ + +  
Sbjct: 355 LLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELY 413

Query: 552 NTFAHAINAG--------SAVVPQAPFGGFKESG 577
           + F   I AG        +     APFGG   SG
Sbjct: 414 DRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASG 447

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 76.5 bits (189), Expect = 1e-14
 Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 13/147 (8%)

Query: 207 FAHAINAGSVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGYFIEPTVFSNVTDDFK 265
           F++ + A  +D + F ++  YI         ++ AGGK     GYF+EPTV        K
Sbjct: 353 FSNFMGA-VIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHK 411

Query: 266 IAREEIFGPVQTIIKF--KTLDEVIERANDT-KYGLASGIVTTN---IDTA-NTFAHAIN 318
           +  EEIFGPV T+  +     +E +E  + T  Y L   I   +   I  A +   +A  
Sbjct: 412 LMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNA-- 469

Query: 319 AGSVWIN--CYQAVVPQAPFGGFKESG 343
           AG+ +IN     AVV Q PFGG + SG
Sbjct: 470 AGNFYINDKPTGAVVGQQPFGGARASG 496

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score = 75.7 bits (187), Expect = 2e-14
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)

Query: 1   MLA-WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           ML  WK  PALA G  V+LKP+E TPLTA  +A L  +AG P GV++V+ G+GP
Sbjct: 132 MLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGP 185

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score = 75.2 bits (186), Expect = 2e-14
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKL--------EAGGKRKGDKGYFIEPTVFSNVTDDFKIA 267
           ++   + ++   ++    +G ++        +    RK      + PT+  NVTDD ++ 
Sbjct: 282 INERHYARLQGLLEDARAKGARVIELNPAGEDFAATRK------LPPTLVLNVTDDMRVM 335

Query: 268 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN-- 325
           +EEIFGP+  I+ + +LDE I+  N     LA      +    +      ++G V IN  
Sbjct: 336 QEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDT 395

Query: 326 CYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
                    PFGG   SG+G   GK     ++  K V
Sbjct: 396 LLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPV 432

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 75.6 bits (185), Expect = 3e-14
 Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 4/135 (2%)

Query: 86  KAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKR----KGD 141
           K VE+A A KV    +     GP +      ++   I+SGV+ G KL   G+       +
Sbjct: 409 KLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYE 468

Query: 142 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI 201
           KG FI PT+ S VT D +  +EEIFGPV   ++  + DE I   N  KYG  + I T++ 
Sbjct: 469 KGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSG 528

Query: 202 DTANTFAHAINAGSV 216
             A  F   I AG +
Sbjct: 529 AAARKFQMDIEAGQI 543

Length = 604

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 75.2 bits (186), Expect = 5e-14
 Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 9/135 (6%)

Query: 217  DAEMFTKVLNYIKSGVEQGGKLEAGGK--RKGDKGYFIEPTVFSNVTDDFKIAREEIFGP 274
            DAE    +  +I+  +++  +L A        + G+F+ PT F    D       E+FGP
Sbjct: 874  DAEAKANLDAHIER-MKREARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGP 930

Query: 275  VQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AV 330
            +  +I++K   LD+VI+  N T YGL  GI +   +TA+  A  +  G+V++N  Q  AV
Sbjct: 931  ILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAV 990

Query: 331  VPQAPFGGFKESGIG 345
            V   PFGG   SG G
Sbjct: 991  VGVQPFGGQGLSGTG 1005

Length = 1038

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 73.9 bits (182), Expect = 7e-14
 Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M AWK  PALAAG  V+LKP+E TPLT L +A L  +   P GV++V+ G G 
Sbjct: 134 MAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGA 185

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score = 73.2 bits (180), Expect = 1e-13
 Identities = 30/50 (60%), Positives = 39/50 (78%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           M+  K G ALAAGC V++KPAEQTPL+AL +A L +QAG P GV++V+ G
Sbjct: 133 MITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITG 182

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score = 73.0 bits (180), Expect = 1e-13
 Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 8/149 (5%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           ++   F ++   +      GGK+  GG +  +K  +I PTV ++V     + +EEIFGP+
Sbjct: 282 INDRHFQRLKKLLS-----GGKVAIGG-QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPI 335

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQ 333
             I+    LDE IE  N  +  LA  + + N    N      ++G V +N       +  
Sbjct: 336 LPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDS 395

Query: 334 APFGGFKESGIGRELGKAALDEYTELKTV 362
            PFGG   SG+G   GK + D ++  ++ 
Sbjct: 396 LPFGGVGNSGMGAYHGKYSFDTFSHKRSC 424

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score = 72.8 bits (178), Expect = 2e-13
 Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 25/250 (10%)

Query: 370 YTSHS----IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----CAGSRTY 421
           YT  S    ++ AAAA +L  V LELGGKSP+V+ +D D+ +           C   +  
Sbjct: 194 YTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQAC 253

Query: 422 VQEDI------YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQ 475
           +  D       Y   V  A++K      G    +S      V++  F + L+ +    E 
Sbjct: 254 ISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDR-LSKLLDEKEV 312

Query: 476 GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535
             K+  GG+ K  +   I PT+  +V  D  I  EEIFGP+  I+    L+E  +     
Sbjct: 313 SDKIVYGGE-KDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSR 371

Query: 536 KYGLASGIVTTNIDTANTFAHAINAGSAVVPQA---------PFGGFKESGIGRELGKAA 586
              LA+ + T N      FA  ++AG  VV            PFGG  ESG+G   GK +
Sbjct: 372 PKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFS 431

Query: 587 LDEYTELKTV 596
            D ++  K V
Sbjct: 432 FDAFSHKKAV 441

Length = 484

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score = 71.7 bits (176), Expect = 3e-13
 Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 37/257 (14%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVI-CADADVDMAYYYCFV-------CAG----SRTYV 422
           I+  AAA +L  V+LELGGK P ++    +  D       +       CAG    +  YV
Sbjct: 199 IIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYV 258

Query: 423 Q-EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNY-----IKSGVEQG 476
             E+ +   + + ++    +  G+   +S      ++ + F ++ N      + + +  G
Sbjct: 259 LVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHG 318

Query: 477 GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
           G ++        K  FIEPT+  N   D  I  EEIFGP+  II  K +++ I   N   
Sbjct: 319 GSIDE-------KKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKP 371

Query: 537 YGLASGIVTTNIDTANTFAHAINAGS-----AVVPQA----PFGGFKESGIGRELGKAAL 587
             LA    T N           ++GS     A++  A    PFGG  ESG GR  GK + 
Sbjct: 372 KPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSF 431

Query: 588 DEYTELKTVTESPLRSY 604
           D ++  K V     RS 
Sbjct: 432 DTFSHEKAVLR---RSL 445

Length = 484

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 71.5 bits (176), Expect = 4e-13
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           + A K  PALAAGC V+LKP+ +TPL A  +A   ++AG P GV++V+P 
Sbjct: 153 LAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA 202

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 71.0 bits (175), Expect = 4e-13
 Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 7/143 (4%)

Query: 74  YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
            V E I D  ++  ++KA     G+   +S   G  ++   F ++ + +       GK+ 
Sbjct: 247 LVHESIKDELIE-ELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLL-----DDGKVV 300

Query: 134 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 193
            GG+   ++ Y I PT+  +V+ D  + +EEIFGP+  I+ +  LDE IE  N     LA
Sbjct: 301 IGGQVDKEERY-IAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLA 359

Query: 194 SGIVTTNIDTANTFAHAINAGSV 216
             + + +           ++G V
Sbjct: 360 LYLFSEDKAVQERVLAETSSGGV 382

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 72.2 bits (178), Expect = 4e-13
 Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 13/150 (8%)

Query: 74  YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            +QED+ D   T +K A+      ++GDP+  S   GP +DA     +  +I++    G 
Sbjct: 829 CLQEDVADRVLTMLKGAM---DELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGR 885

Query: 131 KLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERAND 187
            +         +KG F+ PT+     D       E+FGPV  +++FK   LD VI+  N 
Sbjct: 886 LVHQLPLPAETEKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDINA 943

Query: 188 TKYGLASGIVTTNID-TANTFAHAINAGSV 216
           T YGL  G+  + ID T       I AG++
Sbjct: 944 TGYGLTFGL-HSRIDETIAHVTSRIRAGNI 972

Length = 1208

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 71.1 bits (174), Expect = 6e-13
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 11/142 (7%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEI 271
           +DAE    +L +I+  + Q  K  A            G F+ PT+F    DD     EE+
Sbjct: 349 IDAEAKQNLLAHIEH-MSQTQKKIAQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEEV 405

Query: 272 FGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ- 328
           FGPV  ++++K   LD+++++ N T YGL  G+ +    T          G+ ++N  Q 
Sbjct: 406 FGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQV 465

Query: 329 -AVVPQAPFGGFKESGIGRELG 349
            AVV   PFGG   SG G + G
Sbjct: 466 GAVVGVQPFGGQGLSGTGPKAG 487

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score = 70.5 bits (173), Expect = 9e-13
 Identities = 31/53 (58%), Positives = 38/53 (71%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M+  K GPALAAGC V++KP+E TPLTAL  A L  QAG P GV++V+ G  P
Sbjct: 176 MITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAP 228

Length = 498

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 70.6 bits (173), Expect = 9e-13
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR YV   ++  F  + + + +  KVGDP D     G  +D   F K++ YI+       
Sbjct: 321 SRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPS 380

Query: 131 KLE--AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIE 183
            L   AGGK     GYF+EPTV  +      + +EEIFGPV T+      K+K + ++++
Sbjct: 381 ALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVD 440

Query: 184 RANDTKYGLASGI 196
               T YGL   +
Sbjct: 441 ST--TSYGLTGAV 451

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score = 69.6 bits (171), Expect = 1e-12
 Identities = 25/53 (47%), Positives = 34/53 (64%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           +      PALAAG  V++KPAE  PLTAL +A L ++AG P G ++V+ G G 
Sbjct: 133 ITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGA 185

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score = 70.1 bits (172), Expect = 1e-12
 Identities = 30/52 (57%), Positives = 37/52 (71%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           MLAWK  PALA G  V+LKPAE TPLTAL  A +  +AG P GV++++ G G
Sbjct: 163 MLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG 214

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 70.0 bits (172), Expect = 1e-12
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 71  SRTYVQEDIY-DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG 129
            R  V +    D F+++ VE A   ++G P  +    GP + A    + L   +  +  G
Sbjct: 244 RRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALG 303

Query: 130 GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
           G+     +R      F+ P +  +VTD   +  EEIFGP+  + ++   DE I  AN T+
Sbjct: 304 GEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATR 362

Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
           +GL++G+++ +      F   I AG V
Sbjct: 363 FGLSAGLLSDDEALFERFLARIRAGIV 389

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 69.6 bits (171), Expect = 1e-12
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 2/124 (1%)

Query: 232 VEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 291
           +  GG+     +R      F+ P +  +VTD   +  EEIFGP+  + ++   DE I  A
Sbjct: 300 LALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALA 358

Query: 292 NDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP-QAPFGGFKESGIGRELGK 350
           N T++GL++G+++ +      F   I AG V  N         APFGG   SG  R    
Sbjct: 359 NATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAY 418

Query: 351 AALD 354
            A D
Sbjct: 419 YAAD 422

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 70.2 bits (172), Expect = 1e-12
 Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 25/177 (14%)

Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
              ++   +  K G        + D   TF  A+    +D + F K++ YI+        
Sbjct: 334 KGRLLAELSRVKVG--------DPDDFGTFMGAV----IDEKSFAKIVKYIEHAKSDPSA 381

Query: 238 LE--AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIER 290
           L   AGGK     GYF+EPTV  +      + +EEIFGPV T+      K+K + ++++ 
Sbjct: 382 LTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDS 441

Query: 291 ANDTKYGLASGIVTTNIDTANTFAHAIN--AGSVWIN--CYQAVVPQAPFGGFKESG 343
              T YGL   +   + D        +   AG+ +IN     AVV Q PFGG + SG
Sbjct: 442 T--TSYGLTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 71.0 bits (175), Expect = 1e-12
 Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 247 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVT 304
           +KG F+ PT+     D       E+FGPV  +++FK   LD VI+  N T YGL  G+  
Sbjct: 897 EKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGL-H 953

Query: 305 TNID-TANTFAHAINAGSVWINCYQ--AVVPQAPFGGFKESGIG 345
           + ID T       I AG++++N     AVV   PFGG   SG G
Sbjct: 954 SRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997

Length = 1208

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score = 69.1 bits (170), Expect = 2e-12
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 74  YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
            V E + + F+K+  E+       DP  +S   G  ++   F ++   +       GK+ 
Sbjct: 247 LVHESVKEKFIKELKEEIKKFYGEDPL-ESPDYGRIINEKHFDRLAGLLD-----NGKIV 300

Query: 134 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 193
            GG    +  Y IEPT+  NVT D  + +EEIFGP+  ++ + TLDE IE        LA
Sbjct: 301 FGGNTDRETLY-IEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLA 359

Query: 194 SGIVTTNIDTANTF 207
             + + +       
Sbjct: 360 LYLFSEDKKVEKKV 373

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 69.2 bits (170), Expect = 2e-12
 Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 5/148 (3%)

Query: 72  RTYVQEDIY-DTFVKKAVEKAAARKVGDPF-DKSVQQGPQVDAVMFTKVLNYIKSGVEQG 129
           R  V +    D F+ + V  A    VG    +     G  +       ++      +  G
Sbjct: 282 RLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALG 341

Query: 130 GK-LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
           GK L    + +   G  + P +  +VT   ++  EE FGP+  ++++   DE I  AN+T
Sbjct: 342 GKSLLEMTQLQAGTG-LLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNT 399

Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
           ++GL++G+++ + +  + F   I AG V
Sbjct: 400 RFGLSAGLLSDDREDYDQFLLEIRAGIV 427

Length = 487

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score = 69.1 bits (170), Expect = 3e-12
 Identities = 25/49 (51%), Positives = 35/49 (71%)

Query: 5   KWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           K  PALAAGC V+LKP+E  PL+A+ +A +  +AG P GV +++ G GP
Sbjct: 150 KVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGP 198

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 69.4 bits (170), Expect = 3e-12
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 7/139 (5%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDFKIAREEIFGP 274
           +DAE    +  +I++   +G  +          KG F+ PT+     ++    + E+FGP
Sbjct: 425 IDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE--LENLDELQREVFGP 482

Query: 275 VQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AV 330
           V  ++++K   LDEVI++ N T YGL  G+ T   +T        +AG++++N     AV
Sbjct: 483 VLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAV 542

Query: 331 VPQAPFGGFKESGIGRELG 349
           V   PFGG   SG G + G
Sbjct: 543 VGVQPFGGEGLSGTGPKAG 561

Length = 769

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score = 68.4 bits (168), Expect = 4e-12
 Identities = 22/51 (43%), Positives = 30/51 (58%)

Query: 3   AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
             K  PALAAG  V+LKPA  TPL+AL +  +  +   P GV++V+ G   
Sbjct: 141 LAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDN 191

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score = 67.7 bits (166), Expect = 6e-12
 Identities = 25/49 (51%), Positives = 34/49 (69%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLP 49
           ++A K  PA+AAGCP +LKPA +TPL+AL +  +  + G P G  SVLP
Sbjct: 139 LVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLP 187

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 67.0 bits (164), Expect = 1e-11
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 11/149 (7%)

Query: 74  YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            +QED+ D   T +K A+   A  +VG+P   +   GP +DA     +  +I++   +G 
Sbjct: 389 CLQEDVADRILTMLKGAM---AELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGR 445

Query: 131 KLEAGGKRKGD-KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERAND 187
            +          KG F+ PT+     ++    + E+FGPV  ++++K   LDEVI++ N 
Sbjct: 446 LVHQAAAPNSLQKGTFVAPTLIE--LENLDELQREVFGPVLHVVRYKRDELDEVIDQINA 503

Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
           T YGL  G+ T   +T        +AG++
Sbjct: 504 TGYGLTLGVHTRIDETIAHVTERAHAGNL 532

Length = 769

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 2e-11
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 4   WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           WK  PALAAG  ++ KP+E TPLTAL +A +  +AG PDGV +V+ G G
Sbjct: 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDG 209

Length = 488

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score = 66.4 bits (162), Expect = 2e-11
 Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 1/53 (1%)

Query: 1   MLA-WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           ML+ WK  PALA G  V+LKPAE +PLTA  +A + ++AG PDGV +++ G+G
Sbjct: 150 MLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFG 202

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 65.7 bits (160), Expect = 3e-11
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 15/152 (9%)

Query: 74  YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            VQED+ D   T ++ A+++    KVG P   +   GP +DA     +L +I+  + Q  
Sbjct: 313 CVQEDVADRVLTMIQGAMQEL---KVGVPHLLTTDVGPVIDAEAKQNLLAHIEH-MSQTQ 368

Query: 131 KLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIER 184
           K  A            G F+ PT+F    DD     EE+FGPV  ++++K   LD+++++
Sbjct: 369 KKIAQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQ 426

Query: 185 ANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
            N T YGL  G+ +    T          G+ 
Sbjct: 427 INQTGYGLTMGVHSRIETTYRWIEKHARVGNC 458

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score = 64.7 bits (158), Expect = 6e-11
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 17/162 (10%)

Query: 216 VDAEMFTKVLNY-----IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           ++ + F ++ N      + + +  GG ++        K  FIEPT+  N   D  I  EE
Sbjct: 294 LNKKHFQRLSNLLKDPRVAASIVHGGSIDE-------KKLFIEPTILLNPPLDSDIMTEE 346

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQ 328
           IFGP+  II  K +++ I   N     LA    T N           ++GSV  N    Q
Sbjct: 347 IFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQ 406

Query: 329 AVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSY 370
                 PFGG  ESG GR  GK + D ++  K V     RS 
Sbjct: 407 YACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLR---RSL 445

Length = 484

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score = 64.2 bits (157), Expect = 7e-11
 Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 19/159 (11%)

Query: 63  CLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVM-----FTK 117
           C++P        V   +YD FV+        +KV D F             +     F +
Sbjct: 248 CVAP----DYVLVDPSVYDEFVE------ELKKVLDEFYPGGANASPDYTRIVNPRHFNR 297

Query: 118 VLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT 177
           + + +       GK+  GG+       FI PT+ S+V+ D  +  EE+FGPV  IIK   
Sbjct: 298 LKSLLD---TTKGKVVIGGEMDEAT-RFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDD 353

Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           LDE I+  N     LA  I T +    +       +G V
Sbjct: 354 LDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGV 392

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 64.0 bits (156), Expect = 9e-11
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA 56
           ++ WK GPALA G  V++KP+E+TP TA  +  +    G P GV +V+ G+GP SA
Sbjct: 155 LMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSA 210

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 65.0 bits (159), Expect = 9e-11
 Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)

Query: 422  VQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
            +Q+D+ D     ++ A+   A  ++G+P   S   GP +DAE    +  +I++   +G  
Sbjct: 925  LQDDVADRTLKMLRGAM---AECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRP 981

Query: 479  ---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERAN 533
                          G F+ PT+     D F   + E+FGPV  ++++    LDE+IE+ N
Sbjct: 982  VFQAARENSEDWQSGTFVPPTLIE--LDSFDELKREVFGPVLHVVRYNRNQLDELIEQIN 1039

Query: 534  DTKYGLASGIVTTNIDTANTFAHAI---NAGS---------AVVPQAPFGGFKESGIG 579
             + YGL  G V T ID   T A      + G+         AVV   PFGG   SG G
Sbjct: 1040 ASGYGLTLG-VHTRID--ETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094

Length = 1318

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 63.8 bits (156), Expect = 1e-10
 Identities = 50/191 (26%), Positives = 74/191 (38%), Gaps = 26/191 (13%)

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKV---LNYIKSGVEQ 475
           R +V E   D  ++    + A   VGDP  + V+ GP V  E    V   +  + +  E 
Sbjct: 297 RAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEV 356

Query: 476 ---GGKLEAGGKRKGDKGYFIEPTVF-SNVTDDFKIARE-EIFGPVQTIIKFKTLDEVIE 530
              G           +KG F  PT+   +  D      + E FGPV T++ + +L E IE
Sbjct: 357 VFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIE 416

Query: 531 RANDTKYGLASGIVTTNIDTANTFA----------HAINAGSA--------VVPQAPFGG 572
            A   +  L + +VT +   A                +N  SA         +PQ   GG
Sbjct: 417 LAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGG 476

Query: 573 FKESGIGRELG 583
              +G G ELG
Sbjct: 477 PGRAGGGEELG 487

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 25/50 (50%), Positives = 34/50 (68%)

Query: 3   AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           +WK  PALA G  ++ KP+  TPLTAL +A +  +AG PDGV +V+ G G
Sbjct: 134 SWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGG 183

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score = 63.2 bits (154), Expect = 2e-10
 Identities = 24/53 (45%), Positives = 34/53 (64%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M  WK  PALAAGC  +LKP+E   +T L +A + ++ G P GV++V+ G G 
Sbjct: 167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGT 219

Length = 503

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score = 63.1 bits (154), Expect = 2e-10
 Identities = 25/52 (48%), Positives = 36/52 (69%)

Query: 3   AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPM 54
           A K  PA+A G  V++KP+  TPLTA+ +A + ++AG P GVI+V+ GYG  
Sbjct: 141 AHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSE 192

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 269 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV-WINCY 327
           EE FGP+  ++++   DE I  AN+T++GL++G+++ + +  + F   I AG V W    
Sbjct: 374 EEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPL 433

Query: 328 QAVVPQAPFGGFKESG 343
                 APFGG   SG
Sbjct: 434 TGASSAAPFGGVGASG 449

Length = 487

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 62.8 bits (153), Expect = 2e-10
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN 318
           +VT   ++  EE FGP+  +I++   DE I  AN+T++GL++G+++ + +  + F   I 
Sbjct: 362 DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIR 421

Query: 319 AGSV-WINCYQAVVPQAPFGGFKESG 343
           AG V W          APFGG   SG
Sbjct: 422 AGIVNWNKPLTGASSAAPFGGIGASG 447

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score = 62.1 bits (151), Expect = 3e-10
 Identities = 26/52 (50%), Positives = 38/52 (73%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           ++A K  PA+A GCPV+LKPA +TPL+AL +A +  +AG P+GV+ V+ G  
Sbjct: 139 LVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGER 190

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 62.3 bits (151), Expect = 3e-10
 Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           M AWK  PALAAG  V+LKP+E TPLTAL +A L +   FP GV+++L G G
Sbjct: 153 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRG 203

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score = 61.9 bits (151), Expect = 4e-10
 Identities = 23/53 (43%), Positives = 35/53 (66%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           ++A K  PAL  G  +++KP+E+TPL AL  A L  +AG P GV++++ G G 
Sbjct: 149 LIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGS 201

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 62.6 bits (153), Expect = 4e-10
 Identities = 23/46 (50%), Positives = 26/46 (56%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPM 54
           AL AG  VL KPAEQTPL A     L  +AG P   + +LPG G  
Sbjct: 700 ALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRT 745

Length = 1208

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 61.3 bits (149), Expect = 1e-09
 Identities = 26/45 (57%), Positives = 29/45 (64%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           ALAAG  VL KPAEQTPL A     L  +AG P GV+ +LPG G 
Sbjct: 260 ALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGE 304

Length = 769

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score = 60.0 bits (146), Expect = 2e-09
 Identities = 23/44 (52%), Positives = 32/44 (72%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           ALAAGC V++KP+E T  T L +A L  +AG P GV++++ GYG
Sbjct: 143 ALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYG 186

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score = 59.9 bits (146), Expect = 2e-09
 Identities = 24/49 (48%), Positives = 29/49 (59%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA 56
           PALAAG  V+LKP+E TPL    +A     AG P GV+ V+ G G   A
Sbjct: 142 PALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGATGA 190

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score = 60.1 bits (146), Expect = 2e-09
 Identities = 23/50 (46%), Positives = 36/50 (72%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
            +A K  PA+AA   ++LKP+E+TPL+A+Y+A L  +AG P  ++SV+ G
Sbjct: 136 QVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTG 185

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score = 59.7 bits (145), Expect = 2e-09
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 7/143 (4%)

Query: 75  VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEA 134
           V   I D F++ A+++A     G+   KS      V+     ++   IK   + GGK+  
Sbjct: 257 VHRSIKDKFIE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312

Query: 135 GGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 193
           GG+    +K  ++ PT+  N   D  + +EEIFGP+  I+ ++ +DEV+E  N     LA
Sbjct: 313 GGEVDIENK--YVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLA 370

Query: 194 SGIVTTNIDTANTFAHAINAGSV 216
                 +           ++G+V
Sbjct: 371 LYYFGEDKRHKELVLENTSSGAV 393

Length = 493

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 59.1 bits (144), Expect = 3e-09
 Identities = 24/46 (52%), Positives = 28/46 (60%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           PAL AG  V+LKP  QTPLTAL    L  +AG P  +  V+ G GP
Sbjct: 177 PALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGP 222

Length = 524

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 59.8 bits (146), Expect = 3e-09
 Identities = 24/45 (53%), Positives = 28/45 (62%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           ALAAG  V+ KPAEQTPL A     L  +AG P  V+ +LPG G 
Sbjct: 708 ALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGA 752

Length = 1038

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 59.2 bits (143), Expect = 3e-09
 Identities = 26/44 (59%), Positives = 29/44 (65%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           ALAAG  V+ KPAEQT L A     L Q+AGFP G I +LPG G
Sbjct: 184 ALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRG 227

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 60.0 bits (146), Expect = 3e-09
 Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 12/106 (11%)

Query: 247  DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVT 304
              G F+ PT+     D F   + E+FGPV  ++++    LDE+IE+ N + YGL  G V 
Sbjct: 994  QSGTFVPPTLIE--LDSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLG-VH 1050

Query: 305  TNIDTANTFAHAI---NAGSVWI--NCYQAVVPQAPFGGFKESGIG 345
            T ID   T A      + G++++  N   AVV   PFGG   SG G
Sbjct: 1051 TRID--ETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094

Length = 1318

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 60.0 bits (146), Expect = 3e-09
 Identities = 25/44 (56%), Positives = 29/44 (65%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           ALAAG  VL KPAEQTPL A     +  +AG P GV+ +LPG G
Sbjct: 792 ALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRG 835

Length = 1318

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score = 58.3 bits (142), Expect = 6e-09
 Identities = 21/47 (44%), Positives = 32/47 (68%)

Query: 4   WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           W +  A+A G   +LKP+E+ P  A+ +A L Q+AG PDGV++V+ G
Sbjct: 155 WMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG 201

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 58.1 bits (141), Expect = 7e-09
 Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           + A K  PAL AG  V+LK AE  PL  L +A +  Q   P GV++V+ GYG 
Sbjct: 133 LAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGE 184

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 57.7 bits (140), Expect = 9e-09
 Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 12/150 (8%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGP-----QVDAVMFTKVLNYIKSGV 126
           R +V E   D  ++    + A   VGDP  + V+ GP     Q + V     +  + +  
Sbjct: 297 RAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVR--AAVATLLAEA 354

Query: 127 EQ---GGKLEAGGKRKGDKGYFIEPTVF-SNVTDDFKIARE-EIFGPVQTIIKFKTLDEV 181
           E    G           +KG F  PT+   +  D      + E FGPV T++ + +L E 
Sbjct: 355 EVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEA 414

Query: 182 IERANDTKYGLASGIVTTNIDTANTFAHAI 211
           IE A   +  L + +VT +   A       
Sbjct: 415 IELAARGRGSLVASVVTNDPAFARELVLGA 444

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score = 56.3 bits (137), Expect = 2e-08
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 22/125 (17%)

Query: 74  YVQEDIYDTFV---KKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            V ED  + FV   K AV K       +P   S+     ++   + ++   ++    +G 
Sbjct: 248 LVPEDKLEEFVAAAKAAVAKMYPTLADNPDYTSI-----INERHYARLQGLLEDARAKGA 302

Query: 131 KL--------EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVI 182
           ++        +    RK      + PT+  NVTDD ++ +EEIFGP+  I+ + +LDE I
Sbjct: 303 RVIELNPAGEDFAATRK------LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAI 356

Query: 183 ERAND 187
           +  N 
Sbjct: 357 DYINA 361

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score = 55.8 bits (135), Expect = 3e-08
 Identities = 22/46 (47%), Positives = 27/46 (58%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           PAL AG  V+LKP  QT LTAL+   L  +AG P  +  V+ G G 
Sbjct: 141 PALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGS 186

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score = 55.7 bits (135), Expect = 4e-08
 Identities = 21/44 (47%), Positives = 29/44 (65%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           AL  G  V+LKPAE TP+ A  +  + ++AG P GV++ LPG G
Sbjct: 190 ALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPG 233

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score = 55.5 bits (134), Expect = 4e-08
 Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 135 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 194
           GG+R     Y IEPT+  +   D  I  EEIFGP+  II  K ++E IE  N     LA+
Sbjct: 308 GGERDEKNLY-IEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAA 366

Query: 195 GIVTTNIDTANTFAHAINAGSV---DAEMFTKVLNYIKSGVEQGGKLEAG 241
            + T N +         ++G V   D      V+ Y    +  GG  E+G
Sbjct: 367 YVFTKNKELKRRIVAETSSGGVTFNDT-----VVQYAIDTLPFGGVGESG 411

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score = 55.8 bits (134), Expect = 4e-08
 Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 2/123 (1%)

Query: 242 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 301
           G  K  +   I PT+  +V  D  I  EEIFGP+  I+    L+E  +        LA+ 
Sbjct: 319 GGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAY 378

Query: 302 IVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKAALDEYTEL 359
           + T N      FA  ++AG + +N       +   PFGG  ESG+G   GK + D ++  
Sbjct: 379 LFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHK 438

Query: 360 KTV 362
           K V
Sbjct: 439 KAV 441

Length = 484

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score = 55.2 bits (134), Expect = 5e-08
 Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)

Query: 7   GPALAAGCPVLLKPAEQTPLT-ALYVAALTQQAGFPDGVISVLPG 50
            PALA G  V+LKP  +TP+T  L +A + ++AG P GV++V+PG
Sbjct: 120 APALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPG 164

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 55.1 bits (133), Expect = 5e-08
 Identities = 22/65 (33%), Positives = 41/65 (63%)

Query: 153 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN 212
           +VT   ++  EE FGP+  +I++   DE I  AN+T++GL++G+++ + +  + F   I 
Sbjct: 362 DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIR 421

Query: 213 AGSVD 217
           AG V+
Sbjct: 422 AGIVN 426

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score = 54.9 bits (133), Expect = 6e-08
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 15/157 (9%)

Query: 62  SCLSPLAYRSRTYV--QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVL 119
           +C++P       YV    ++ + FV+   +K      G+   +S   G  ++   F ++ 
Sbjct: 239 TCIAP------DYVLCTPEVQEKFVEAL-KKTLKEFYGEDPKESPDYGRIINDRHFQRLK 291

Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 179
             +      GGK+  GG +  +K  +I PTV ++V     + +EEIFGP+  I+    LD
Sbjct: 292 KLLS-----GGKVAIGG-QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLD 345

Query: 180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           E IE  N  +  LA  + + N    N      ++G V
Sbjct: 346 EAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGV 382

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score = 54.8 bits (133), Expect = 7e-08
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 1   MLA-WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           +LA WK  PAL AG  V+LKP+  TPL  L +  L Q+   P GV++V+ G
Sbjct: 129 LLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSG 178

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 54.6 bits (132), Expect = 9e-08
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           PAL AG  V+ KP+E TP  A  +  L ++AG P GV++++ G
Sbjct: 120 PALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG 162

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score = 53.9 bits (130), Expect = 1e-07
 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)

Query: 2   LAWK-WGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           LA K    ALAAG  V+LKP+E+TP+  L +A + ++AG P GV +V+ G G
Sbjct: 135 LATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGG 186

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 53.8 bits (130), Expect = 1e-07
 Identities = 23/49 (46%), Positives = 27/49 (55%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA 56
           PAL AG  V+LK + QTPL     AA   +AG P+GV  VL      SA
Sbjct: 139 PALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHETSA 187

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 53.6 bits (129), Expect = 2e-07
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 7   GPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDG 43
            PA+AAGCPV++KPA  TPL+ L    L  +AG P+G
Sbjct: 146 APAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEG 182

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score = 52.7 bits (127), Expect = 3e-07
 Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 7   GPALAAGCPVLLKPAEQTPLTALYV-AALTQQAGFPDGVISVLPG 50
            PALA G  V+LKP  +TP++   V A L ++AG P GV+ VLPG
Sbjct: 132 APALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG 176

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

 Score = 53.3 bits (129), Expect = 3e-07
 Identities = 51/194 (26%), Positives = 74/194 (38%), Gaps = 32/194 (16%)

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
           R  V   + D  ++    + A   VGDP  + V+ G     E    V   + + +    +
Sbjct: 301 RAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAA-LLAAAE 359

Query: 479 LEAGGKRK-------GDKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDE 527
           +  GG           +KG F  PT+     DD   A      E FGPV T++ +  LDE
Sbjct: 360 IVFGGPDSFEVVGADAEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDE 417

Query: 528 VIERANDTKYGLASGIVTTNIDTANTFA----------HAINAGSAV--------VPQAP 569
            IE A   K  L + +VT + + A                +N  SA         +PQ  
Sbjct: 418 AIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLV 477

Query: 570 FGGFKESGIGRELG 583
            GG   +G G ELG
Sbjct: 478 HGGPGRAGGGEELG 491

Length = 675

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 52.5 bits (126), Expect = 5e-07
 Identities = 41/183 (22%), Positives = 69/183 (37%), Gaps = 18/183 (9%)

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
           R  V + + +  +K    + A   +GDP ++ V  GP V  E    V   + + +  G +
Sbjct: 297 RVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAE 356

Query: 479 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
           +  GG  + D  +F    + +       +   E FGPV T   +    E    A      
Sbjct: 357 VRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGS 416

Query: 539 LASGIVTTNIDTANTFA----------HAINAGSAV--------VPQAPFGGFKESGIGR 580
           L + + T++ + A  F           H +N   A         +P+   GG   +G G 
Sbjct: 417 LVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGE 476

Query: 581 ELG 583
           ELG
Sbjct: 477 ELG 479

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 6e-07
 Identities = 20/44 (45%), Positives = 28/44 (63%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           A+ AG  VLLKPA  TP+ A     + ++AG P GV++ +PG G
Sbjct: 195 AIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSG 238

Length = 514

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 52.3 bits (126), Expect = 6e-07
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)

Query: 75   VQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
            +Q+D+ D     ++ A+   A  ++G+P   S   GP +DA     +  +I++   +G  
Sbjct: 925  LQDDVADRTLKMLRGAM---AECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRP 981

Query: 132  ---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERAN 186
                          G F+ PT+     D F   + E+FGPV  ++++    LDE+IE+ N
Sbjct: 982  VFQAARENSEDWQSGTFVPPTLIE--LDSFDELKREVFGPVLHVVRYNRNQLDELIEQIN 1039

Query: 187  DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
             + YGL  G V T ID   T A    +  V
Sbjct: 1040 ASGYGLTLG-VHTRID--ETIAQVTGSAHV 1066

Length = 1318

>gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 6e-07
 Identities = 59/258 (22%), Positives = 91/258 (35%), Gaps = 45/258 (17%)

Query: 386 RVSLELGGKSPLVICADADVDMAYYYCFV--------------C-AGSRTYVQEDIYDTF 430
           RV++E    +  ++  DA      +  FV              C A  R +V E +YD  
Sbjct: 253 RVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAV 312

Query: 431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK---- 486
            +    + A   VG+P +  V+ GP V       V   + +   Q   L  GG       
Sbjct: 313 AEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDA 372

Query: 487 -GDKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
                  + PT+      D   A      E+FGPV T++ ++     +  A   +  L +
Sbjct: 373 DPAVAACVGPTLL--GASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVA 430

Query: 542 GIVTTNIDTANTFA----------HAINAGSA--------VVPQAPFGGFKESGIGRELG 583
            + + +       A          H I+   A        V+PQ+  GG   +G G ELG
Sbjct: 431 SVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELG 490

Query: 584 KA-ALDEYTELKTVTESP 600
              AL  Y     V  SP
Sbjct: 491 GLRALAFYHRRSAVQASP 508

Length = 521

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 51.4 bits (124), Expect = 8e-07
 Identities = 23/44 (52%), Positives = 28/44 (63%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           ALAAG  V+ KPAEQTPL A     L  +AG P  V+ ++PG G
Sbjct: 191 ALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDG 234

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score = 50.2 bits (121), Expect = 2e-06
 Identities = 20/43 (46%), Positives = 24/43 (55%)

Query: 7   GPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLP 49
            P L AG  VLLK A   P  AL +  L ++AGFP+GV   L 
Sbjct: 118 APNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLL 160

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score = 50.0 bits (120), Expect = 2e-06
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)

Query: 7   GPALAAGCPVLLKPAEQTPLTA-LYVAALTQQAGFPDGVISVLPGYG 52
            PALA G  V+LKPA  TP+T  L +A + ++AG P GV++V+ G G
Sbjct: 152 APALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAG 198

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 50.0 bits (120), Expect = 3e-06
 Identities = 21/43 (48%), Positives = 27/43 (62%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           PAL AG  V+ KP+E TP  A     L QQAG P GV++++ G
Sbjct: 157 PALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG 199

Length = 487

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 48.9 bits (117), Expect = 6e-06
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 3   AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           A K    LAAG  V++KP EQ PL+AL +A L ++   P GV ++LPG G 
Sbjct: 134 AAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGA 183

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 48.5 bits (116), Expect = 7e-06
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 7   GPALAAGCPVLLKPAEQTPLTALYVA-ALTQQAGFPDGVISVLPGYGP 53
            PALAAGC V++KPA QT      +   L +    P GV+++    G 
Sbjct: 139 APALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGS 186

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

 Score = 48.7 bits (117), Expect = 7e-06
 Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 14/153 (9%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V   + D  ++    + A   VGDP  + V+ G          V   + + +    +
Sbjct: 301 RAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAA-LLAAAE 359

Query: 132 LEAGGKRK-------GDKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDE 180
           +  GG           +KG F  PT+     DD   A      E FGPV T++ +  LDE
Sbjct: 360 IVFGGPDSFEVVGADAEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDE 417

Query: 181 VIERANDTKYGLASGIVTTNIDTANTFAHAINA 213
            IE A   K  L + +VT + + A         
Sbjct: 418 AIELAARGKGSLVASLVTADPEVARELVLGAAP 450

Length = 675

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 47.9 bits (114), Expect = 1e-05
 Identities = 20/50 (40%), Positives = 34/50 (68%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
            +A K  PA+A    +++KP+E+TPL+ALY+A +  +AG P  ++ V+ G
Sbjct: 155 QVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTG 204

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 47.6 bits (113), Expect = 1e-05
 Identities = 20/47 (42%), Positives = 31/47 (65%)

Query: 4   WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           W +  A+A G   +LKP+E+ P  A+ +A L  +AG PDGV++V+ G
Sbjct: 155 WMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG 201

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 46.8 bits (112), Expect = 2e-05
 Identities = 20/45 (44%), Positives = 26/45 (57%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           PAL  G  V+ KPA Q  L  + +A     AGFP GV++V+ G G
Sbjct: 164 PALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRG 208

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score = 46.4 bits (111), Expect = 3e-05
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVL 48
            LAAG  V+LK +E +P T   +  +  +AG P GV++V+
Sbjct: 122 PLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVV 161

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 46.3 bits (110), Expect = 3e-05
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 5   KWGPALAAGCPVLLKPAEQTPLTALYVAAL-TQQAGFPDGVISVLP 49
           K GPALAAG  V+LKPA  TP  A  +  L  +   FP GV++++ 
Sbjct: 161 KLGPALAAGNTVVLKPAPDTPWCAAVLGELIAEHTDFPPGVVNIVT 206

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 46.3 bits (110), Expect = 3e-05
 Identities = 19/43 (44%), Positives = 27/43 (62%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           PAL AG  V+ KP+E TP  A     L ++AG P GV++++ G
Sbjct: 155 PALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG 197

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 45.2 bits (107), Expect = 8e-05
 Identities = 29/140 (20%), Positives = 54/140 (38%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V + + +  +K    + A   +GDP ++ V  GP V       V   + + +  G +
Sbjct: 297 RVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAE 356

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           +  GG  + D  +F    + +       +   E FGPV T   +    E    A      
Sbjct: 357 VRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGS 416

Query: 192 LASGIVTTNIDTANTFAHAI 211
           L + + T++ + A  F   +
Sbjct: 417 LVATLATSDPEEARQFILGL 436

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 8e-05
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 11/123 (8%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R +V E +YD   +    + A   VG+P +  V+ GP V       V   + +   Q   
Sbjct: 301 RIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEV 360

Query: 132 LEAGGKRK-----GDKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDEVI 182
           L  GG              + PT+      D   A      E+FGPV T++ ++     +
Sbjct: 361 LFDGGGFALVDADPAVAACVGPTLL--GASDPDAATAVHDVEVFGPVATLLPYRDAAHAL 418

Query: 183 ERA 185
             A
Sbjct: 419 ALA 421

Length = 521

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score = 44.3 bits (105), Expect = 1e-04
 Identities = 23/41 (56%), Positives = 26/41 (63%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVL 48
           PAL AG   LLK A   P TALY+A L ++AGFPDG    L
Sbjct: 146 PALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTL 186

Length = 457

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 47/197 (23%), Positives = 71/197 (36%), Gaps = 21/197 (10%)

Query: 369 SYTSHSIMAAAAASNLK--RVSLELGGKSPLVICADAD---------VDMAYYYC--FVC 415
            +T  S +A   A + K  R+ LEL G +  V+  DA          V            
Sbjct: 184 LFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCT 243

Query: 416 AGSRTYVQEDIYDT-FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVE 474
           A S  +V E+   T  V+K     A RK+ D     VQ      A M   + N + S + 
Sbjct: 244 AQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQT-FTTLA-MIAHMENLLGSVLL 301

Query: 475 QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR---EEIFGPVQTIIKFKTLDE--VI 529
             GK           G  +   +F  + +  K      EEIFGP   ++++K      V+
Sbjct: 302 FSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVL 361

Query: 530 ERANDTKYGLASGIVTT 546
           E        L + I + 
Sbjct: 362 ELLERMHGSLTAAIYSN 378

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 43.2 bits (102), Expect = 3e-04
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 5   KWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           K  PAL AG  V+LKP  Q  + AL++      AGFP G+IS + G G
Sbjct: 178 KIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKG 225

Length = 496

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 43.0 bits (102), Expect = 4e-04
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 13/116 (11%)

Query: 247 DKGYFIEPTVF-SNVTDDFKIARE-EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 304
           +KG F  PT+   +  D      + E FGPV T++ + +L E IE A   +  L + +VT
Sbjct: 372 EKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVT 431

Query: 305 TNIDTANTFAHAINA--GSVWIN---------CYQAVVPQAPFGGFKESGIGRELG 349
            +   A           G + +           + + +PQ   GG   +G G ELG
Sbjct: 432 NDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELG 487

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 41.8 bits (99), Expect = 0.001
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 6/53 (11%)

Query: 4   WKWGPALAAGC--PVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPG 50
           W W  A+A  C   V+ KP+  TPLTA+ V  +  +     G P  + S++ G
Sbjct: 149 WGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCG 201

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score = 40.9 bits (96), Expect = 0.002
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 7/79 (8%)

Query: 122 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 181
           + + +  GG ++        K  FIEPT+  N   D  I  EEIFGP+  II  K +++ 
Sbjct: 311 VAASIVHGGSIDE-------KKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDS 363

Query: 182 IERANDTKYGLASGIVTTN 200
           I   N     LA    T N
Sbjct: 364 IAFINSKPKPLAIYAFTNN 382

Length = 484

>gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

 Score = 41.0 bits (97), Expect = 0.002
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 247 DKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 302
           +KG F  PT+     DD   A      E FGPV T++ +  LDE IE A   K  L + +
Sbjct: 376 EKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASL 433

Query: 303 VTTNIDTANTFAHAINA 319
           VT + + A         
Sbjct: 434 VTADPEVARELVLGAAP 450

Length = 675

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score = 40.7 bits (95), Expect = 0.002
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPGYGPMSA 56
            ALA G PV++KP     +    +  L   AG  P   ++++ G G    
Sbjct: 123 GALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQ 172

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 40.6 bits (96), Expect = 0.002
 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGP 53
           ALAAGCPV++K     P T+  VA   + A    G P GV S+L G G 
Sbjct: 131 ALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGR 179

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score = 39.9 bits (94), Expect = 0.003
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGV 44
            A+AAG   +LKP+E TP T+  +A + ++A   D V
Sbjct: 123 SAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEV 159

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 39.8 bits (94), Expect = 0.003
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
            A+AAG  V+LKP+E  P T+  +A L  +  F    ++V+ G
Sbjct: 123 GAIAAGNTVVLKPSELAPATSALLAKLIPKY-FDPEAVAVVEG 164

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 40.5 bits (94), Expect = 0.003
 Identities = 17/47 (36%), Positives = 30/47 (63%)

Query: 4   WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           W +  A+  G   +LKP+E+ P  ++ +A L  +AG PDGV++++ G
Sbjct: 268 WMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHG 314

Length = 604

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score = 39.9 bits (94), Expect = 0.004
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           A+AAGC V+LKP+E TP TA  +A L  +         V+ G
Sbjct: 132 AIAAGCTVVLKPSELTPHTAALLAELVPKY-LDPDAFQVVQG 172

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 39.9 bits (94), Expect = 0.004
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)

Query: 8   PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPM 54
           PAL  G  VL KP++   L+   V  + ++AG P GVI+ +PG GP+
Sbjct: 193 PALM-GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPV 238

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	605
KOG2450|consensus	501		100.0
KOG2451|consensus	503		100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
KOG2456|consensus	477		100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
KOG2454|consensus	583		100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
KOG2455|consensus	561		100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
KOG2450|consensus	501		100.0
KOG2452|consensus	881		100.0
KOG2453|consensus	507		100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
KOG2451|consensus	503		100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
KOG2456|consensus	477		100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	99.98
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	99.98
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	99.98
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	99.98
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	99.98
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	99.98
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	99.98
PRK11903	521	aldehyde dehydrogenase; Provisional	99.98
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	99.97
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	99.97
KOG2452|consensus	881		99.97
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	99.97
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	99.97
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	99.97
KOG2454|consensus	583		99.97
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	99.97
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	99.96
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	99.96
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	99.96
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	99.95
PRK11809	1318	putA trifunctional transcriptional regulator/proli	99.95
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	99.94
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	99.94
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	99.93
KOG2455|consensus	561		99.92
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	99.92
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	99.91
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	99.91
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	99.91
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	99.9
KOG2453|consensus	507		99.89
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	99.89
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	99.89
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	99.88
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	99.88
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	99.88
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	99.84
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	99.83
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	99.83
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	99.82
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	99.76
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.62
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	99.59
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.41
KOG2449|consensus	157		99.4
KOG2449|consensus	157		99.35
KOG4165|consensus	433		98.96
KOG4165|consensus	433		98.85
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	98.29
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	97.3
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	96.57
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	96.17

>KOG2450|consensus

Probab=100.00  E-value=2.1e-63  Score=506.58  Aligned_cols=243  Identities=55%  Similarity=0.872  Sum_probs=228.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ...+||+|.   .+|+.|++.++.+++||++||||||+|.||++|||++.|+          .|+-|++.+|+|||+++|
T Consensus       239 ~kiaFTGSt---~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iy  315 (501)
T KOG2450|consen  239 DKVAFTGST---PVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIY  315 (501)
T ss_pred             ceEEecCCC---cchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHH
Confidence            344788885   9999999999988899999999999999999999999987          333499999999999999


Q ss_pred             HHHHHHHHHHHhh-cccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAA-RKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~-~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++++++..+ +++|||.++.+.+||.+++.|++|++++++.++++|+++++||.+..+.|||+.|||+.++.++|.
T Consensus       316 defv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~  395 (501)
T KOG2450|consen  316 DEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMR  395 (501)
T ss_pred             HHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhh
Confidence            9999999999976 999999999999999999999999999999999999999999987777899999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G  579 (605)
                      +++|||||||+.|++|++.||+|+++|.++|||+++|||+|.+++.++++++++|+++.       ...||||+|+||+|
T Consensus       396 i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~G  475 (501)
T KOG2450|consen  396 IAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIG  475 (501)
T ss_pred             hhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999543       56899999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEcCCCC
Q psy1099         580 RELGKAALDEYTELKTVTESPLRS  603 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~~~~~  603 (605)
                      |+.|.+++.+||+.|+|+.+--.+
T Consensus       476 RE~g~~~l~~ytevKtv~v~~~~~  499 (501)
T KOG2450|consen  476 RELGEYGLEAYTEVKTVTVKLPQK  499 (501)
T ss_pred             ccccHHHHhhcceeeEEEEeCCCC
Confidence            999999999999999999875543

>KOG2451|consensus

Probab=100.00  E-value=3.2e-61  Score=468.03  Aligned_cols=241  Identities=39%  Similarity=0.615  Sum_probs=226.1

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||+|+   .+|+.+++..+. ++|++.+||||+.|.||++|||+|.|+          .|+.|.+..|+|||+++
T Consensus       242 VrkisFTGST---~VGKiL~~qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~i  317 (503)
T KOG2451|consen  242 VRKISFTGST---NVGKILMAQSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSI  317 (503)
T ss_pred             eeeEEeeccc---hHHHHHHHhhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhh
Confidence            4455789985   999999998887 999999999999999999999999997          34459999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCC-CeeEeeEEeecCCCCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK-GYFIEPTVFSNVTDDF  505 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~-g~~~~Pti~~~~~~~~  505 (605)
                      ||+|+.+|.++++++++||.+++.++.|||||+.++++++.++++|+.+|+++++||+...+. ++|++|||+.+++++|
T Consensus       318 yD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m  397 (503)
T KOG2451|consen  318 YDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNM  397 (503)
T ss_pred             HHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccc
Confidence            999999999999999999999999999999999999999999999999999999999955444 5999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcc-------cCCCCcccccCCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGI  578 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~-------~~~~~PfGG~~~SG~  578 (605)
                      -+..||+|||+.+|++||++||+|+++|+++.||++|+||+|.++..+++++|+.|.+       .....||||+|+||+
T Consensus       398 ~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~  477 (503)
T KOG2451|consen  398 LVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGF  477 (503)
T ss_pred             eeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCcccccc
Confidence            9999999999999999999999999999999999999999999999999999999983       346789999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcCC
Q psy1099         579 GRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      ||+++++++++|+..|.+.+..+
T Consensus       478 GREgskyGidey~~ik~icig~L  500 (503)
T KOG2451|consen  478 GREGSKYGIDEYLVIKYICIGTL  500 (503)
T ss_pred             CccccccchhhhhhhheeeecCc
Confidence            99999999999999999998765

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=3.7e-60  Score=511.43  Aligned_cols=237  Identities=34%  Similarity=0.590  Sum_probs=221.9

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ...+|||++   .+|++|.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       227 ~~v~FTGS~---~~G~~i~~~aa~-~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~  302 (482)
T PRK11241        227 RKLSFTGST---EIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY  302 (482)
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHH
Confidence            344689986   999999988876 999999999999999999999999986          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|.++++++++|+|.++.+++||++++.+++++++++++++++|++++.||...+..|+|++|||+.+++++|++
T Consensus       303 d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i  382 (482)
T PRK11241        303 DRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKV  382 (482)
T ss_pred             HHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChh
Confidence            99999999999999999999999999999999999999999999999999999999764346999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccCC-------CCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~~-------~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+++|       .+||||+|+||+|+
T Consensus       383 ~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~  462 (482)
T PRK11241        383 AKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGR  462 (482)
T ss_pred             hhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCc
Confidence            99999999999999999999999999999999999999999999999999999994433       47999999999999


Q ss_pred             hhHHHHHHHhhhceEEEE
Q psy1099         581 ELGKAALDEYTELKTVTE  598 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~  598 (605)
                      ++|.+++++||+.|+|+.
T Consensus       463 ~~g~~g~~~ft~~k~v~~  480 (482)
T PRK11241        463 EGSKYGIEDYLEIKYMCI  480 (482)
T ss_pred             ccHHHHHHHhhcceEEEE
Confidence            999999999999999875

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=1.4e-59  Score=502.65  Aligned_cols=238  Identities=49%  Similarity=0.736  Sum_probs=220.3

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      ....+||+|+   .+|+++++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       213 v~~i~FTGSt---~~G~~i~~~Aa~-~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v  288 (472)
T COG1012         213 VDAISFTGST---AVGRAIAAAAAA-NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESV  288 (472)
T ss_pred             CCEEEEECCh---HHHHHHHHHHhh-cCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhh
Confidence            3444789996   999999998885 999999999999999999999999775          45559999999999999


Q ss_pred             HHHHHHHHHHHHhh-cccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCC
Q psy1099         427 YDTFVKKAVEKAAA-RKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       427 ~~~~~~~l~~~~~~-~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~  505 (605)
                      ||+|++++.++ ++ +++|||.|+.+++||+|++.+++++++++++++++|++++.||+. .. |+|++|||+.+++++|
T Consensus       289 ~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~  365 (472)
T COG1012         289 YDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDM  365 (472)
T ss_pred             HHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCC
Confidence            99999999999 55 899998999999999999999999999999999999999999983 33 9999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKES  576 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~S  576 (605)
                      ++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++++++++|.+++         ..+||||+|+|
T Consensus       366 ~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~S  445 (472)
T COG1012         366 RIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQS  445 (472)
T ss_pred             hhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccc
Confidence            999999999999999999999999999999999999999999999999999999999433         33799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEEcCC
Q psy1099         577 GIGRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      |+|+++|.+++++|++.|+|..+..
T Consensus       446 G~G~~~g~~~~~~~~~~k~v~~~~~  470 (472)
T COG1012         446 GLGREGGKYGLEEFTEVKTVTIKLG  470 (472)
T ss_pred             cCCccchHHHHHHHhcceEEEEecC
Confidence            9999999999999999999987654

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=6.1e-59  Score=504.87  Aligned_cols=241  Identities=56%  Similarity=0.891  Sum_probs=224.4

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +..+|||++   .+|+.|.+.++.++++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       239 ~~V~FTGS~---~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~  315 (501)
T PLN02766        239 DKVSFTGST---EVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIY  315 (501)
T ss_pred             CEEEEECcH---HHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH
Confidence            344689986   9999999888744899999999999999999999999986          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|++
T Consensus       316 d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i  395 (501)
T PLN02766        316 DEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKI  395 (501)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChh
Confidence            99999999999999999999999999999999999999999999999999999999765457999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.+++       +.+||||+|.||+|+
T Consensus       396 ~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~  475 (501)
T PLN02766        396 AQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGR  475 (501)
T ss_pred             hhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCc
Confidence            9999999999999999999999999999999999999999999999999999999433       457999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEcCC
Q psy1099         581 ELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      ++|++++++||+.|+|+....
T Consensus       476 ~~G~~~l~~ft~~k~v~~~~~  496 (501)
T PLN02766        476 DQGMDALDKYLQVKSVVTPLY  496 (501)
T ss_pred             cchHHHHHHHhceEEEEEecc
Confidence            999999999999999987544

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=5.1e-59  Score=498.34  Aligned_cols=235  Identities=29%  Similarity=0.397  Sum_probs=218.4

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----h-------cccccccCeEEEecccH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----Y-------YCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~-------~~~c~a~~~v~v~~~~~  427 (605)
                      ..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+    +       |+.|++++|+|||++++
T Consensus       191 ~V~FTGS~---~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~  266 (484)
T PLN02174        191 KIFYTGSS---KIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYA  266 (484)
T ss_pred             EEEEECCh---HHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHH
Confidence            34689986   999999988876 999999999999999999999999986    2       34499999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.+ ++++||++++.++++++++++++ ++|+++++||... ..|+|++|||+.+++++|++
T Consensus       267 d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~~-~~g~~~~PTvl~~v~~~~~i  343 (484)
T PLN02174        267 PKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEKD-RENLKIAPTILLDVPLDSLI  343 (484)
T ss_pred             HHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCcC-CCCCEEEEEEEecCCCCChh
Confidence            999999999999999999987 79999999999999999999998 7899999999753 46999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGI  578 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~SG~  578 (605)
                      ++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|++++         +.+||||+|.||+
T Consensus       344 ~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~  423 (484)
T PLN02174        344 MSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGM  423 (484)
T ss_pred             hcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCcccc
Confidence            9999999999999999999999999999999999999999999999999999999433         3479999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcC
Q psy1099         579 GRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+++|.+++++||+.|+|+.++
T Consensus       424 Gr~~G~~gl~~ft~~K~v~~~~  445 (484)
T PLN02174        424 GAYHGKFSFDAFSHKKAVLYRS  445 (484)
T ss_pred             CccchHHHHHHhcceEEEEECC
Confidence            9999999999999999999764

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=7.6e-59  Score=504.76  Aligned_cols=237  Identities=33%  Similarity=0.425  Sum_probs=220.2

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ..+||||.   .+|+.|.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++ +|
T Consensus       330 ~V~FTGSt---~vG~~I~~~Aa~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d  404 (604)
T PLN02419        330 AVSFVGSN---TAGMHIYARAAA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AK  404 (604)
T ss_pred             EEEEeCCh---HHHHHHHHHHhc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HH
Confidence            34688886   999999888775 999999999999999999999999986          4555999999999999 89


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc----CCCCeeEeeEEeecCCCC
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK----GDKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~----~~~g~~~~Pti~~~~~~~  504 (605)
                      +|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||...    .+.|+|++|||+.+++++
T Consensus       405 ~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d  484 (604)
T PLN02419        405 SWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPD  484 (604)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999742    136999999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKES  576 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~S  576 (605)
                      |.+++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.+++        +.+||||+|.|
T Consensus       485 ~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~S  564 (604)
T PLN02419        485 MECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKAS  564 (604)
T ss_pred             CHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcC
Confidence            9999999999999999999999999999999999999999999999999999999999432        35799999999


Q ss_pred             CCC--ChhHHHHHHHhhhceEEEEcC
Q psy1099         577 GIG--RELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       577 G~G--~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+|  +++|++++++||+.|+|+.+.
T Consensus       565 G~G~~~~~G~~gl~~ft~~K~v~~~~  590 (604)
T PLN02419        565 FAGDLNFYGKAGVDFFTQIKLVTQKQ  590 (604)
T ss_pred             CCCCCcccHHHHHHHhhCeEEEEEcc
Confidence            999  799999999999999998764

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=2.4e-58  Score=501.92  Aligned_cols=239  Identities=57%  Similarity=0.930  Sum_probs=222.9

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.|++.++.+++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       276 d~V~FTGS~---~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~  352 (538)
T PLN02466        276 DKLAFTGST---DTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY  352 (538)
T ss_pred             CEEEEECCH---HHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHH
Confidence            344689986   9999999888755899999999999999999999999886          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++
T Consensus       353 d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i  432 (538)
T PLN02466        353 DEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLI  432 (538)
T ss_pred             HHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCch
Confidence            99999999999999999999999999999999999999999999999999999999865557999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.+++       +.+||||+|.||+|+
T Consensus       433 ~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~  512 (538)
T PLN02466        433 AQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGR  512 (538)
T ss_pred             hcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCc
Confidence            9999999999999999999999999999999999999999999999999999999433       457999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEc
Q psy1099         581 ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~  599 (605)
                      ++|++++++||+.|+|+..
T Consensus       513 ~~G~~gl~~ft~~k~v~~~  531 (538)
T PLN02466        513 EKGIYSLNNYLQVKAVVTP  531 (538)
T ss_pred             ccHHHHHHHhcceEEEEEe
Confidence            9999999999999999764

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=2e-58  Score=499.00  Aligned_cols=239  Identities=47%  Similarity=0.748  Sum_probs=222.4

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.+++.++..++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       228 ~~v~ftGs~---~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~  304 (486)
T cd07140         228 RKLGFTGST---PIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIH  304 (486)
T ss_pred             CEEEEECcH---HHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH
Confidence            344688886   9999998887744899999999999999999999999986          455599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++.+++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++
T Consensus       305 ~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i  384 (486)
T cd07140         305 DEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFI  384 (486)
T ss_pred             HHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChh
Confidence            99999999999999999999999999999999999999999999999999999999764457899999999999999999


Q ss_pred             cccceeeeeeeeEeeC--CHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC
Q psy1099         508 AREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI  578 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~--~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~  578 (605)
                      ++||+||||++|++|+  |++|||+++|+++|||++||||+|.+.++++++++++|.+++       +.+||||+|+||+
T Consensus       385 ~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~  464 (486)
T cd07140         385 AKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGF  464 (486)
T ss_pred             hhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcC
Confidence            9999999999999999  699999999999999999999999999999999999999443       3579999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEc
Q psy1099         579 GRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+++|++++++||+.|+|+.+
T Consensus       465 G~~~G~~~l~~ft~~k~v~~~  485 (486)
T cd07140         465 GKDLGEEALNEYLKTKTVTIE  485 (486)
T ss_pred             CCcchHHHHHHhhcEEEEEEe
Confidence            999999999999999999863

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=4.5e-58  Score=485.33  Aligned_cols=237  Identities=37%  Similarity=0.613  Sum_probs=221.2

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.|.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       153 ~V~ftGs~---~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~  228 (409)
T PRK10090        153 MVSMTGSV---SAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYD  228 (409)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHH
Confidence            34678886   999999888776 999999999999999999999999986          4555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCC-CCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDK-SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      +|+++|.++++++++|+|.++ ++++||+++..+++++++++++++++|++++.||...+..|+|++|||+.+++++|++
T Consensus       229 ~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i  308 (409)
T PRK10090        229 QFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSI  308 (409)
T ss_pred             HHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHH
Confidence            999999999999999999987 8999999999999999999999999999999999765556899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++       +..||||+|+||+|+
T Consensus       309 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~  388 (409)
T PRK10090        309 MHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGG  388 (409)
T ss_pred             HhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCc
Confidence            9999999999999999999999999999999999999999999999999999999443       346999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEc
Q psy1099         581 ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~  599 (605)
                      ++|.+++++||+.|+++.+
T Consensus       389 ~~g~~gl~~f~~~k~v~~~  407 (409)
T PRK10090        389 ADGKHGLHEYLQTQVVYLQ  407 (409)
T ss_pred             cchHHHHHHhcceEEEEEe
Confidence            9999999999999999764

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=7.2e-58  Score=493.49  Aligned_cols=238  Identities=32%  Similarity=0.560  Sum_probs=222.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +..+|||+.   .+|+.+++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       217 ~~V~fTGS~---~~G~~i~~~aa~-~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  292 (472)
T TIGR03374       217 RMVSLTGSI---ATGEHILSHTAP-SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY  292 (472)
T ss_pred             CEEEEECCH---HHHHHHHHHHhh-cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHH
Confidence            344688886   999999888876 999999999999999999999999986          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcC-CeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQG-GKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g-~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++|++++.++++|+|.++++++||+++..+++++++++++++++| ++++.||...+..|+|++|||+.+++++|+
T Consensus       293 ~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~  372 (472)
T TIGR03374       293 DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDA  372 (472)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCCh
Confidence            9999999999999999999999999999999999999999999999999 799999976545689999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|.+|||+++|+++|||++||||+|.+++.++++++++|.+.+       +.+||||+|.||+|
T Consensus       373 i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G  452 (472)
T TIGR03374       373 IVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYG  452 (472)
T ss_pred             hhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccC
Confidence            99999999999999999999999999999999999999999999999999999999433       45899999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEc
Q psy1099         580 RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +++|++++++||+.|+++.+
T Consensus       453 ~~~g~~~l~~~t~~k~i~~~  472 (472)
T TIGR03374       453 KDMSLYGLEDYTVVRHIMVK  472 (472)
T ss_pred             ccchHHHHHHhhceEEEEEC
Confidence            99999999999999999753

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=7e-58  Score=496.10  Aligned_cols=238  Identities=37%  Similarity=0.610  Sum_probs=222.3

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ...+||||+   .+|+.|.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       222 ~~V~fTGS~---~~G~~i~~~aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~  297 (477)
T cd07113         222 AKVSFTGSV---ATGKKIGRQAAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKF  297 (477)
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHH
Confidence            344688986   999999988876 999999999999999999999999986          455599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||......|+|++|||+.++++++++
T Consensus       298 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~  377 (477)
T cd07113         298 DELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRL  377 (477)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChH
Confidence            99999999999999999999999999999999999999999999999999999999764446999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.++       .+.+||||+|.||+|+
T Consensus       378 ~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~  457 (477)
T cd07113         378 MREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGR  457 (477)
T ss_pred             HhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCc
Confidence            999999999999999999999999999999999999999999999999999999833       3467999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEc
Q psy1099         581 ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~  599 (605)
                      ++|.+++++||+.|+|+.+
T Consensus       458 ~~g~~~l~~~t~~k~v~~~  476 (477)
T cd07113         458 EFGSAFIDDYTELKSVMIR  476 (477)
T ss_pred             cchHHHHHHhhceEEEEEe
Confidence            9999999999999999864

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-58  Score=492.03  Aligned_cols=239  Identities=34%  Similarity=0.551  Sum_probs=222.9

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|++|.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       206 ~~V~fTGs~---~~G~~i~~~aa~-~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  281 (462)
T PRK13968        206 AAVTVTGSV---RAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIA  281 (462)
T ss_pred             CEEEEECCH---HHHHHHHHHHhh-cCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHH
Confidence            334678886   999999988876 999999999999999999999999986          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|+++++++++|+|.+..+++||+++..+++++++++++++.+|+++++||......|+|++|||+.+++++|++
T Consensus       282 ~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~  361 (462)
T PRK13968        282 SAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTA  361 (462)
T ss_pred             HHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChH
Confidence            99999999999999999999999999999999999999999999999999999999764446899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|.++|||+++|||+|.+.++++++++++|.+++       +.+||||+|.||+|+
T Consensus       362 ~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~  441 (462)
T PRK13968        362 FREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGR  441 (462)
T ss_pred             HhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCc
Confidence            9999999999999999999999999999999999999999999999999999999433       457999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEcC
Q psy1099         581 ELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~~  600 (605)
                      ++|++++++||+.|+|+.++
T Consensus       442 ~~G~~~l~~ft~~k~v~~~~  461 (462)
T PRK13968        442 ELSHFGLHEFCNIQTVWKDR  461 (462)
T ss_pred             CchHHHHHHhcceeEEEEec
Confidence            99999999999999998754

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=1.8e-57  Score=493.56  Aligned_cols=239  Identities=42%  Similarity=0.620  Sum_probs=222.6

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++++
T Consensus       242 ~V~fTGS~---~~G~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~  317 (498)
T PLN02278        242 KITFTGST---AVGKKLMAGAAA-TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYD  317 (498)
T ss_pred             EEEEECcH---HHHHHHHHHHhh-cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHH
Confidence            34678886   999999888776 899999999999999999999999986          3445999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++++++
T Consensus       318 ~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~  397 (498)
T PLN02278        318 KFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIF  397 (498)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999997644468999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCCh
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRE  581 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~~  581 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++       +.+||||+|.||+|++
T Consensus       398 ~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~  477 (498)
T PLN02278        398 REEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGRE  477 (498)
T ss_pred             hCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCcc
Confidence            999999999999999999999999999999999999999999999999999999443       3469999999999999


Q ss_pred             hHHHHHHHhhhceEEEEcCC
Q psy1099         582 LGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~~~~~  601 (605)
                      +|++++++||+.|+|+.+.+
T Consensus       478 ~G~~~l~~ft~~k~i~~~~~  497 (498)
T PLN02278        478 GSKYGIDEYLEIKYVCLGNM  497 (498)
T ss_pred             chHHHHHHhheeEEEEEecC
Confidence            99999999999999987654

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=2.3e-57  Score=491.94  Aligned_cols=237  Identities=58%  Similarity=0.937  Sum_probs=221.5

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...|||++   .+|+.|.+.++.++++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       222 ~~v~fTGs~---~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~  298 (476)
T cd07142         222 DKVAFTGST---EVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY  298 (476)
T ss_pred             CEEEEECcH---HHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHH
Confidence            344688886   9999998887744899999999999999999999999986          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||......|+|++|||+.++++++++
T Consensus       299 d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i  378 (476)
T cd07142         299 DEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKI  378 (476)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChh
Confidence            99999999999999999999999999999999999999999999999999999999865557999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|.++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|.||+|+
T Consensus       379 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~  458 (476)
T cd07142         379 ARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGR  458 (476)
T ss_pred             hhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCc
Confidence            9999999999999999999999999999999999999999999999999999999443       458999999999999


Q ss_pred             hhHHHHHHHhhhceEEE
Q psy1099         581 ELGKAALDEYTELKTVT  597 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~  597 (605)
                      ++|++++++||+.|+++
T Consensus       459 ~~g~~~~~~ft~~k~v~  475 (476)
T cd07142         459 EKGIYALNNYLQVKAVV  475 (476)
T ss_pred             cchHHHHHHhhheeEEe
Confidence            99999999999999985

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=1.8e-57  Score=493.38  Aligned_cols=239  Identities=38%  Similarity=0.579  Sum_probs=222.4

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .....||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       220 vd~v~fTGS~---~~G~~i~~~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i  295 (481)
T TIGR03216       220 VDAITFTGET---RTGSAIMKAAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPI  295 (481)
T ss_pred             CCEEEEECCH---HHHHHHHHHHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHH
Confidence            3444789986   999999888876 899999999999999999999999986          35559999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-----CCCeeEeeEEeecC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-----DKGYFIEPTVFSNV  501 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-----~~g~~~~Pti~~~~  501 (605)
                      +|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||...+     ..|+|++|||+.++
T Consensus       296 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v  375 (481)
T TIGR03216       296 FDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGL  375 (481)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCC
Confidence            9999999999999999999999999999999999999999999999999999999996432     36999999999999


Q ss_pred             CCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccC
Q psy1099         502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFK  574 (605)
Q Consensus       502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~  574 (605)
                      ++++++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.+++       +.+||||+|
T Consensus       376 ~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k  455 (481)
T TIGR03216       376 PDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSK  455 (481)
T ss_pred             CCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999543       367999999


Q ss_pred             CCCCCChhHHHHHHHhhhceEEEEc
Q psy1099         575 ESGIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       575 ~SG~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      .||+|+++|.+++++||+.|+|+.+
T Consensus       456 ~SG~G~~~g~~~l~~f~~~k~v~~~  480 (481)
T TIGR03216       456 LSGIGREGGVHSLEFYTELTNVCIK  480 (481)
T ss_pred             cCcCCcCchHHHHHHhhceEEEEEe
Confidence            9999999999999999999999864

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=2.5e-57  Score=487.88  Aligned_cols=235  Identities=36%  Similarity=0.596  Sum_probs=220.8

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDT  429 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~  429 (605)
                      ..|||++   .+|+.|.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|+
T Consensus       205 V~fTGs~---~~G~~i~~~a~~-~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~  280 (457)
T PRK09406        205 ATLTGSE---PAGRAVAAIAGD-EIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDA  280 (457)
T ss_pred             EEEECcH---HHHHHHHHHHHh-cCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHH
Confidence            3678886   999999887775 999999999999999999999999986          45569999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccc
Q psy1099         430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR  509 (605)
Q Consensus       430 ~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~  509 (605)
                      |+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|.+++
T Consensus       281 f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~  360 (457)
T PRK09406        281 FAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYT  360 (457)
T ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhh
Confidence            99999999999999999999999999999999999999999999999999999986555799999999999999999999


Q ss_pred             cceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCChh
Q psy1099         510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGREL  582 (605)
Q Consensus       510 eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~~~  582 (605)
                      ||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++       +.+||||+|.||+|+++
T Consensus       361 eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~  440 (457)
T PRK09406        361 EEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGREL  440 (457)
T ss_pred             CCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccc
Confidence            99999999999999999999999999999999999999999999999999998433       45899999999999999


Q ss_pred             HHHHHHHhhhceEEEE
Q psy1099         583 GKAALDEYTELKTVTE  598 (605)
Q Consensus       583 g~~~~~~~~~~k~v~~  598 (605)
                      |++++++||+.|+|+.
T Consensus       441 g~~~l~~~t~~k~v~~  456 (457)
T PRK09406        441 SAHGIREFCNIKTVWI  456 (457)
T ss_pred             hHHHHHHhhceEEEEe
Confidence            9999999999999874

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=4.3e-57  Score=490.41  Aligned_cols=239  Identities=62%  Similarity=0.955  Sum_probs=222.3

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.+.+.++..++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       226 d~V~ftGs~---~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  302 (481)
T cd07141         226 DKVAFTGST---EVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY  302 (481)
T ss_pred             CEEEEECcH---HHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHH
Confidence            344678886   9999998877644799999999999999999999999986          344599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|++.|++++.++++|+|.++.+++||++++.+++++.+++++++++|+++++||+..+..|+|++|||+.++++++++
T Consensus       303 d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~  382 (481)
T cd07141         303 DEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRI  382 (481)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChh
Confidence            99999999999999999999999999999999999999999999999999999999875567999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.+++       +.+||||+|.||+|+
T Consensus       383 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~  462 (481)
T cd07141         383 AKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGR  462 (481)
T ss_pred             hhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCc
Confidence            9999999999999999999999999999999999999999999999999999998432       457999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEc
Q psy1099         581 ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~  599 (605)
                      ++|.+++++||+.|+|+.+
T Consensus       463 ~~g~~~~~~ft~~k~v~~~  481 (481)
T cd07141         463 ELGEYGLQEYTEVKTVTIK  481 (481)
T ss_pred             cchHHHHHHHhheEEEEEC
Confidence            9999999999999999763

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=3e-57  Score=487.79  Aligned_cols=233  Identities=41%  Similarity=0.630  Sum_probs=218.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....||+++   .+|+.|.+.++. +++|+++|||||||+||++|||++.++          .|+.|++++|+|||++++
T Consensus       199 ~~v~ftGs~---~~g~~v~~~aa~-~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~  274 (448)
T TIGR01780       199 RKISFTGST---NVGKILMKQSAS-TVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIY  274 (448)
T ss_pred             CEEEEECcH---HHHHHHHHHHhh-cCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHH
Confidence            334678886   999999988876 899999999999999999999999986          356699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|.++++++++|+|.++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++
T Consensus       275 d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i  354 (448)
T TIGR01780       275 DEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLV  354 (448)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChH
Confidence            99999999999999999999999999999999999999999999999999999999765456899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+++       +.+||||+|+||+|+
T Consensus       355 ~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~  434 (448)
T TIGR01780       355 AKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGR  434 (448)
T ss_pred             hhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCc
Confidence            9999999999999999999999999999999999999999999999999999998433       457999999999999


Q ss_pred             hhHHHHHHHhhhce
Q psy1099         581 ELGKAALDEYTELK  594 (605)
Q Consensus       581 ~~g~~~~~~~~~~k  594 (605)
                      ++|++++++||+.|
T Consensus       435 ~~g~~~~~~~~~~k  448 (448)
T TIGR01780       435 EGSKYGIEEYLETK  448 (448)
T ss_pred             cchHHHHHHHhccC
Confidence            99999999999875

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-56  Score=487.92  Aligned_cols=239  Identities=44%  Similarity=0.720  Sum_probs=221.6

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.+.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       222 d~V~fTGS~---~~g~~i~~~aa~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  297 (488)
T PRK13252        222 AKVSFTGGV---PTGKKVMAAAAA-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIK  297 (488)
T ss_pred             CEEEEECcH---HHHHHHHHHHhh-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH
Confidence            344678886   899999887776 899999999999999999999999986          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~~  503 (605)
                      |+|+++|.+++.++++|+|.++.+++||++++.+++++++++++++++|+++++||...+    ..|+|++|||+.++++
T Consensus       298 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~  377 (488)
T PRK13252        298 AAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTD  377 (488)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCC
Confidence            999999999999999999999999999999999999999999999999999999996432    3599999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKES  576 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~S  576 (605)
                      ++++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|.|
T Consensus       378 ~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~S  457 (488)
T PRK13252        378 DMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQS  457 (488)
T ss_pred             CChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccC
Confidence            99999999999999999999999999999999999999999999999999999999998432       45799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEEcC
Q psy1099         577 GIGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+|+++|++++++||+.|+|+...
T Consensus       458 G~G~~~g~~~~~~ft~~k~i~~~~  481 (488)
T PRK13252        458 GIGRENGIATLEHYTQIKSVQVEM  481 (488)
T ss_pred             cCCcCChHHHHHHhcceEEEEEeC
Confidence            999999999999999999998753

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=1.6e-56  Score=479.55  Aligned_cols=235  Identities=40%  Similarity=0.635  Sum_probs=219.8

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.|.+.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       177 ~v~fTGs~---~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~  252 (429)
T cd07100         177 GVTLTGSE---RAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYD  252 (429)
T ss_pred             EEEEECcH---HHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHH
Confidence            33678886   899999988776 999999999999999999999999986          4555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|+++
T Consensus       253 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~  332 (429)
T cd07100         253 EFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAY  332 (429)
T ss_pred             HHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999997644468999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCCh
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRE  581 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~~  581 (605)
                      +||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.+++       +.+||||+|.||+|++
T Consensus       333 ~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~  412 (429)
T cd07100         333 DEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRE  412 (429)
T ss_pred             hCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCccccccCCc
Confidence            999999999999999999999999999999999999999999999999999998433       4579999999999999


Q ss_pred             hHHHHHHHhhhceEEE
Q psy1099         582 LGKAALDEYTELKTVT  597 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~  597 (605)
                      +|++++++||+.|+|+
T Consensus       413 ~g~~~l~~~~~~k~v~  428 (429)
T cd07100         413 LGRFGIREFVNIKTVW  428 (429)
T ss_pred             chHHHHHHhcceeEEe
Confidence            9999999999999985

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=1.5e-56  Score=487.49  Aligned_cols=240  Identities=43%  Similarity=0.657  Sum_probs=222.8

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .....||||.   .+|+.+++.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       215 v~~V~fTGS~---~~G~~i~~~aa~-~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v  290 (488)
T TIGR02299       215 VKAVSFTGET---ATGSIIMRNGAD-TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESI  290 (488)
T ss_pred             cCEEEEECcH---HHHHHHHHHHHh-cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHH
Confidence            3444688886   999999988876 999999999999999999999999986          45559999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-------CCCeeEeeEEee
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-------DKGYFIEPTVFS  499 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-------~~g~~~~Pti~~  499 (605)
                      +|+|+++|++++.++++|+|.++.+++||++++.++++++++++++++.|+++++||....       ..|+|++|||+.
T Consensus       291 ~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~  370 (488)
T TIGR02299       291 AEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFT  370 (488)
T ss_pred             HHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEe
Confidence            9999999999999999999999999999999999999999999999999999999987532       258999999999


Q ss_pred             cCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccc
Q psy1099         500 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGG  572 (605)
Q Consensus       500 ~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG  572 (605)
                      ++++++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+++       +.+||||
T Consensus       371 ~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG  450 (488)
T TIGR02299       371 GADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGG  450 (488)
T ss_pred             cCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999543       3579999


Q ss_pred             cCCCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099         573 FKESGIGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       573 ~~~SG~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +|.||+|+++|++++++||+.|+|+.+.
T Consensus       451 ~k~SG~G~~~g~~~~~~~~~~k~i~~~~  478 (488)
T TIGR02299       451 VKASGIGREGGTYSFDFYTETKNVALAL  478 (488)
T ss_pred             CccCcCCccchHHHHHHHhceEEEEEec
Confidence            9999999999999999999999998754

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=1.6e-56  Score=485.14  Aligned_cols=236  Identities=31%  Similarity=0.469  Sum_probs=219.4

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       239 ~v~fTGS~---~~G~~v~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d  314 (508)
T PLN02315        239 LVSFTGSS---KVGLMVQQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYD  314 (508)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHH
Confidence            34688986   999999888776 899999999999999999999999986          4566999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|+++++++++|+|.++.+++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++|+++
T Consensus       315 ~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~  393 (508)
T PLN02315        315 DVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVV  393 (508)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHH
Confidence            9999999999999999999999999999999999999999999999999999999765557999999999 699999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHH--HcccCcccC--------CCCcccccCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAH--AINAGSAVV--------PQAPFGGFKESGI  578 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~--~~~~G~~~~--------~~~PfGG~~~SG~  578 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++  ++++|.+++        +.+||||+|.||+
T Consensus       394 ~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~  473 (508)
T PLN02315        394 KEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGG  473 (508)
T ss_pred             hCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccC
Confidence            999999999999999999999999999999999999999999999985  689998332        3579999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEc
Q psy1099         579 GRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+++|.+++++||+.|+|+.+
T Consensus       474 G~~~G~~~l~~ft~~k~v~~~  494 (508)
T PLN02315        474 GREAGSDSWKQYMRRSTCTIN  494 (508)
T ss_pred             CccchHHHHHHHhhEEEEEEe
Confidence            999999999999999998865

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-56  Score=483.22  Aligned_cols=239  Identities=33%  Similarity=0.573  Sum_probs=222.5

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.|.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       218 d~V~fTGs~---~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~  293 (475)
T PRK13473        218 RMVSLTGSI---ATGKHVLSAAAD-SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIY  293 (475)
T ss_pred             CEEEEECcH---HHHHHHHHHHhh-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH
Confidence            344688886   999999888775 899999999999999999999999987          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcC-CeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQG-GKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g-~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++|+++++++++|+|.++++++||++++.++++++++++++.++| +++++||+..+..|+|++|||+.++++++.
T Consensus       294 d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~  373 (475)
T PRK13473        294 DDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDE  373 (475)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCCh
Confidence            9999999999999999999999999999999999999999999999999 999999986544689999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|+||+|
T Consensus       374 ~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G  453 (475)
T PRK13473        374 IVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYG  453 (475)
T ss_pred             hhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC
Confidence            99999999999999999999999999999999999999999999999999999998433       45799999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEcC
Q psy1099         580 RELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +++|++++++||+.|++++++
T Consensus       454 ~~~g~~~~~~~t~~k~i~~~~  474 (475)
T PRK13473        454 KDMSLYGLEDYTVVRHVMVKH  474 (475)
T ss_pred             ccchHHHHHHHhceEEEEEec
Confidence            999999999999999998743

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=3.2e-56  Score=481.02  Aligned_cols=234  Identities=36%  Similarity=0.571  Sum_probs=218.4

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDT  429 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~  429 (605)
                      ..|||++   .+|++|.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|+
T Consensus       199 V~fTGs~---~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~  274 (454)
T cd07101         199 VMFTGST---ATGRVVAERAGR-RLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDE  274 (454)
T ss_pred             EEEECCH---HHHHHHHHHHHh-cCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHH
Confidence            3578886   999999988876 899999999999999999999999986          35669999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCeeEeeEEeecCCCCCccc
Q psy1099         430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       430 ~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      |+++|++++.++++|+|.++++++||++++.+++++++++++++++|++++.||.... ..|+|++|||+.+++++++++
T Consensus       275 f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~  354 (454)
T cd07101         275 FVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELF  354 (454)
T ss_pred             HHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999986432 357999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC----------CCCcccccCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV----------PQAPFGGFKESGI  578 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~----------~~~PfGG~~~SG~  578 (605)
                      +||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.+++          +.+||||+|.||+
T Consensus       355 ~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~  434 (454)
T cd07101         355 AEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGL  434 (454)
T ss_pred             hCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCccccccc
Confidence            999999999999999999999999999999999999999999999999999998322          3479999999999


Q ss_pred             CChhHHHHHHHhhhceEEE
Q psy1099         579 GRELGKAALDEYTELKTVT  597 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~  597 (605)
                      |+++|++++++||+.|+|+
T Consensus       435 G~~~g~~~~~~~~~~k~v~  453 (454)
T cd07101         435 GRRHGAEGLLKYTETQTVA  453 (454)
T ss_pred             CccchHHHHHHhcceEEEe
Confidence            9999999999999999986

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=6.7e-56  Score=479.77  Aligned_cols=239  Identities=53%  Similarity=0.874  Sum_probs=222.4

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.|.+.++.++++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       225 d~V~fTGs~---~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~  301 (481)
T cd07143         225 DKVAFTGST---LVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIY  301 (481)
T ss_pred             CEEEEECch---HHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHH
Confidence            344678886   8999998887744799999999999999999999999986          455599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|.+++.++++|+|.++.+++||++++.++++++++++++++.|+++++||+.....|+|++|||+.++++++++
T Consensus       302 d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~  381 (481)
T cd07143         302 DKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKI  381 (481)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChh
Confidence            99999999999999999999999999999999999999999999999999999999865557899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|.++|||++||||+|.+.+.++++++++|.+.+       +.+||||+|.||+|+
T Consensus       382 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~  461 (481)
T cd07143         382 VKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGR  461 (481)
T ss_pred             hhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCc
Confidence            9999999999999999999999999999999999999999999999999999999433       457999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEc
Q psy1099         581 ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~  599 (605)
                      ++|++++++||+.|+|+.+
T Consensus       462 ~~G~~~l~~~t~~k~i~~~  480 (481)
T cd07143         462 ELGEYALENYTQIKAVHIN  480 (481)
T ss_pred             ccHHHHHHHHhCeEEEEEe
Confidence            9999999999999999763

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=4.9e-56  Score=481.85  Aligned_cols=238  Identities=42%  Similarity=0.670  Sum_probs=222.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.|.+.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       232 ~~v~fTGs~---~~g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~  307 (503)
T PLN02467        232 DKIAFTGST---ATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA  307 (503)
T ss_pred             CEEEEECCH---HHHHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHH
Confidence            344688886   999999888876 899999999999999999999999886          455599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~~  505 (605)
                      |+|+++|.+++.++++|+|.++.+++||+++..+++++.+++++++.+|+++++||...+  ..|+|++|||+.++++++
T Consensus       308 d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~  387 (503)
T PLN02467        308 SEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSM  387 (503)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999997532  358999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI  578 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~  578 (605)
                      ++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.+.++++++++|.+++       +.+||||+|.||+
T Consensus       388 ~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~  467 (503)
T PLN02467        388 QIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGF  467 (503)
T ss_pred             hHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcC
Confidence            999999999999999999999999999999999999999999999999999999999543       3579999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEc
Q psy1099         579 GRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+++|++++++||+.|+++..
T Consensus       468 G~~~G~~~l~~ft~~k~i~~~  488 (503)
T PLN02467        468 GRELGEWGLENYLSVKQVTKY  488 (503)
T ss_pred             CCcchHHHHHHhhCeEEEEEe
Confidence            999999999999999999985

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=5.1e-56  Score=479.96  Aligned_cols=237  Identities=48%  Similarity=0.753  Sum_probs=220.7

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...|||++   .+|+.+.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       216 ~~v~fTGs~---~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  291 (475)
T cd07117         216 DKLAFTGST---EVGRDVAIAAAK-KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIY  291 (475)
T ss_pred             CEEEEECcH---HHHHHHHHHHhc-cCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHH
Confidence            344688886   999999887765 999999999999999999999999986          455599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~~  503 (605)
                      |+|+++|.+++.++++|+|.++++++||+++..+++++++++++++++|+++++||....    ..|+|++|||+.++++
T Consensus       292 d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~  371 (475)
T cd07117         292 DEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTN  371 (475)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCC
Confidence            999999999999999999999999999999999999999999999999999999997542    3689999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKES  576 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~S  576 (605)
                      ++++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.+.++++++++|.+.+       +.+||||+|.|
T Consensus       372 ~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~S  451 (475)
T cd07117         372 DMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKS  451 (475)
T ss_pred             CChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccC
Confidence            99999999999999999999999999999999999999999999999999999999999443       35799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEE
Q psy1099         577 GIGRELGKAALDEYTELKTVTE  598 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~  598 (605)
                      |+|+++|++++++||+.|+|+.
T Consensus       452 G~G~~~g~~~~~~ft~~k~v~~  473 (475)
T cd07117         452 GIGRETHKSMLDAYTQMKNIYI  473 (475)
T ss_pred             cCCCCchHHHHHHHhCeEEEEE
Confidence            9999999999999999999975

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=4.1e-56  Score=482.85  Aligned_cols=237  Identities=35%  Similarity=0.456  Sum_probs=219.5

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       217 ~V~fTGs~---~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~  292 (478)
T cd07085         217 AVSFVGST---PVGEYIYERAAA-NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEAD  292 (478)
T ss_pred             EEEEECCH---HHHHHHHHHHhh-cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHH
Confidence            34678886   899999887775 899999999999999999999999986          3556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCCCC
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~~~  504 (605)
                      +|+++|++++.++++|+|.++.+++||++++.+++++.+++++++++|+++++||....    ..|+|++|||+.+++++
T Consensus       293 ~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~  372 (478)
T cd07085         293 EWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPD  372 (478)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCC
Confidence            99999999999999999999999999999999999999999999999999999996432    36899999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKES  576 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~S  576 (605)
                      +++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+++        +.+||||+|.|
T Consensus       373 ~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~S  452 (478)
T cd07085         373 MKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGS  452 (478)
T ss_pred             ChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999432        34799999999


Q ss_pred             CCC--ChhHHHHHHHhhhceEEEEc
Q psy1099         577 GIG--RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       577 G~G--~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+|  +++|++++++||+.|+|+.+
T Consensus       453 G~G~~~~~g~~~~~~~~~~k~v~~~  477 (478)
T cd07085         453 FFGDLHFYGKDGVRFYTQTKTVTSR  477 (478)
T ss_pred             cCCCCcCChHHHHHHhcceEEEEEe
Confidence            999  47899999999999999865

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=4.8e-56  Score=481.25  Aligned_cols=238  Identities=45%  Similarity=0.681  Sum_probs=221.8

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCC-----CHHHHH----------hcccccccCeEEE
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADA-----DVDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~da-----d~~~a~----------~~~~c~a~~~v~v  422 (605)
                      ....|||++   .+|++|++.++. ++||+++|||||||+||++||     |++.|+          .|+.|++++|+||
T Consensus       216 ~~V~fTGs~---~~g~~i~~~aa~-~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V  291 (480)
T cd07559         216 AKLAFTGST---TVGRLIMQYAAE-NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALV  291 (480)
T ss_pred             CEEEEECcH---HHHHHHHHHHhc-cCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEE
Confidence            334688886   999999888776 999999999999999999999     999986          4556999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEe
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVF  498 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~  498 (605)
                      |++++|+|+++|++++.++++|+|.++.+++||++++.+++++.+++++++++|+++++||...+    ..|+|++|||+
T Consensus       292 ~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl  371 (480)
T cd07559         292 QESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLI  371 (480)
T ss_pred             cHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEE
Confidence            99999999999999999999999999999999999999999999999999999999999997643    36999999999


Q ss_pred             ecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCccc
Q psy1099         499 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFG  571 (605)
Q Consensus       499 ~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfG  571 (605)
                      .+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++++++|.+++       +.+|||
T Consensus       372 ~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfG  451 (480)
T cd07559         372 KGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFG  451 (480)
T ss_pred             eCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcC
Confidence            9999999999999999999999999999999999999999999999999999999999999999443       357999


Q ss_pred             ccCCCCCCChhHHHHHHHhhhceEEEEc
Q psy1099         572 GFKESGIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       572 G~~~SG~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+|.||+|+++|++++++||+.|+|+.+
T Consensus       452 G~k~SG~G~~~g~~~~~~~~~~k~v~~~  479 (480)
T cd07559         452 GYKKSGIGRETHKMMLDHYQQTKNILVS  479 (480)
T ss_pred             CCccCcCCccChHHHHHHhhceEEEEEe
Confidence            9999999999999999999999999763

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=6.3e-56  Score=480.76  Aligned_cols=235  Identities=46%  Similarity=0.694  Sum_probs=219.3

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.+.+.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       217 ~v~fTGs~---~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d  292 (473)
T cd07097         217 AVSFTGST---AVGRRIAAAAAA-RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHD  292 (473)
T ss_pred             EEEEECcH---HHHHHHHHHHhc-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHH
Confidence            34678886   999999888776 999999999999999999999999986          4556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCCCc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+++|.++++++++|+|.++.+++||++++.+++++.+++++++++|+++++||...+  ..|+|++|||+.+++++++
T Consensus       293 ~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~  372 (473)
T cd07097         293 RFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMR  372 (473)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCCh
Confidence            99999999999999999999999999999999999999999999999999999997543  3589999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGI  578 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~  578 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.        .+.+||||+|.||+
T Consensus       373 ~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~  452 (473)
T cd07097         373 IAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSY  452 (473)
T ss_pred             hhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccC
Confidence            9999999999999999999999999999999999999999999999999999999832        24579999999999


Q ss_pred             C-ChhHHHHHHHhhhceEEE
Q psy1099         579 G-RELGKAALDEYTELKTVT  597 (605)
Q Consensus       579 G-~~~g~~~~~~~~~~k~v~  597 (605)
                      | +++|++++++||+.|+|+
T Consensus       453 G~~~~g~~~l~~f~~~k~v~  472 (473)
T cd07097         453 GPREQGEAALEFYTTIKTVY  472 (473)
T ss_pred             cccCCcHHHHHHhhceeEEe
Confidence            9 899999999999999986

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=7e-56  Score=484.04  Aligned_cols=239  Identities=37%  Similarity=0.564  Sum_probs=221.7

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDT  429 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~  429 (605)
                      ..|||++   .+|+++.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|+
T Consensus       235 V~fTGs~---~~g~~v~~~aa~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~  310 (524)
T PRK09407        235 LMFTGST---ATGRVLAEQAGR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDE  310 (524)
T ss_pred             EEEECCH---HHHHHHHHHHHh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHH
Confidence            3678886   999999988776 999999999999999999999999986          35669999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCeeEeeEEeecCCCCCccc
Q psy1099         430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       430 ~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      |+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|+++
T Consensus       311 f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~  390 (524)
T PRK09407        311 FVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELA  390 (524)
T ss_pred             HHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHH
Confidence            9999999999999999999999999999999999999999999999999999987432 257999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC----------CCCcccccCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV----------PQAPFGGFKESGI  578 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~----------~~~PfGG~~~SG~  578 (605)
                      +||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.+.+          +.+||||+|.||+
T Consensus       391 ~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~  470 (524)
T PRK09407        391 REETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGL  470 (524)
T ss_pred             hCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCcccccc
Confidence            999999999999999999999999999999999999999999999999999998332          2469999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcCCC
Q psy1099         579 GRELGKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~~~  602 (605)
                      |+++|.+++++||+.|+|+.+++.
T Consensus       471 G~~~g~~~l~~ft~~k~v~~~~~~  494 (524)
T PRK09407        471 GRRHGAEGLLKYTESQTIATQRVL  494 (524)
T ss_pred             CccchHHHHHHhCCeEEEEEcccc
Confidence            999999999999999999987543

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=5.7e-56  Score=480.38  Aligned_cols=237  Identities=32%  Similarity=0.482  Sum_probs=218.9

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +..+|||++   .+|++|.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       216 d~V~fTGs~---~~g~~i~~~aa~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  291 (474)
T cd07130         216 PLVSFTGST---AVGRQVGQAVAA-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIY  291 (474)
T ss_pred             CEEEEECch---HHHHHHHHHHHh-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHH
Confidence            344688986   999999888776 999999999999999999999999986          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++.+++||+++..+++++++++++++++|+++++||+..+..|+|++|||+.++++ |++
T Consensus       292 d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i  370 (474)
T cd07130         292 DEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-API  370 (474)
T ss_pred             HHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHH
Confidence            9999999999999999999999999999999999999999999999999999999986545699999999987766 999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHH--cccCccc--------CCCCcccccCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHA--INAGSAV--------VPQAPFGGFKESG  577 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~--~~~G~~~--------~~~~PfGG~~~SG  577 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++++++  +++|.++        .+.+||||+|.||
T Consensus       371 ~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG  450 (474)
T cd07130         371 VKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETG  450 (474)
T ss_pred             HhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCcccccc
Confidence            99999999999999999999999999999999999999999999999987  8888732        2357999999999


Q ss_pred             CCChhHHHHHHHhhhceEEEEc
Q psy1099         578 IGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +|+++|++++++||+.|+|+.+
T Consensus       451 ~G~~~g~~~~~~f~~~k~~~~~  472 (474)
T cd07130         451 GGRESGSDAWKQYMRRSTCTIN  472 (474)
T ss_pred             CCccchHHHHHHHhheEEEEEe
Confidence            9999999999999999998864

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=8.3e-56  Score=481.30  Aligned_cols=239  Identities=47%  Similarity=0.736  Sum_probs=222.3

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.|.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       215 ~~V~fTGs~---~~g~~i~~~aa~-~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~  290 (482)
T cd07119         215 DLVSFTGGT---ATGRSIMRAAAG-NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIH  290 (482)
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH
Confidence            344688986   999999988876 899999999999999999999999986          355699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~~  503 (605)
                      |+|+++|++++.++++|+|.++++++||+++..+++++++++++++++|+++++||....    ..|+|++|||+.++++
T Consensus       291 d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~  370 (482)
T cd07119         291 DKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDR  370 (482)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCC
Confidence            999999999999999999999999999999999999999999999999999999997532    2589999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKES  576 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~S  576 (605)
                      ++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+       +.+||||+|.|
T Consensus       371 ~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~S  450 (482)
T cd07119         371 TMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQS  450 (482)
T ss_pred             CChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999998433       45799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEEcC
Q psy1099         577 GIGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+|+++|++++++||+.|+|+.+.
T Consensus       451 G~G~~~G~~~l~~~t~~k~v~~~~  474 (482)
T cd07119         451 GIGRELGPTGLEEYQETKHININL  474 (482)
T ss_pred             cCCccchHHHHHHHhceEEEEEec
Confidence            999999999999999999998764

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=7.4e-56  Score=478.79  Aligned_cols=236  Identities=46%  Similarity=0.761  Sum_probs=220.3

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       201 ~~V~fTGs~---~~g~~v~~~aa~-~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  276 (456)
T cd07110         201 DKISFTGST---ATGSQVMQAAAQ-DIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIA  276 (456)
T ss_pred             CEEEEECCH---HHHHHHHHHHhh-cCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH
Confidence            334678886   999999988876 999999999999999999999999986          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~~  505 (605)
                      |+|+++|++++.++++|+|.++.+++||++++.++++++++++++++.|+++++||....  ..|+|++|||+.+++++|
T Consensus       277 d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~  356 (456)
T cd07110         277 DAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDS  356 (456)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCC
Confidence            999999999999999999999999999999999999999999999999999999997643  468999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI  578 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~  578 (605)
                      ++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|.||+
T Consensus       357 ~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~  436 (456)
T cd07110         357 RIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGI  436 (456)
T ss_pred             hHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccC
Confidence            999999999999999999999999999999999999999999999999999999998433       3579999999999


Q ss_pred             CChhHHHHHHHhhhceEEE
Q psy1099         579 GRELGKAALDEYTELKTVT  597 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~  597 (605)
                      |+++|++++++||+.|+|+
T Consensus       437 G~~~g~~~l~~~~~~k~i~  455 (456)
T cd07110         437 GRELGEWGLDNYLEVKQIT  455 (456)
T ss_pred             CccchHHHHHHhcceeEEe
Confidence            9999999999999999986

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=8.8e-56  Score=482.48  Aligned_cols=239  Identities=30%  Similarity=0.445  Sum_probs=218.8

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhcccc------ceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEE
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLK------RVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTY  421 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~------~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~  421 (605)
                      ...+||||+   .+|+.|++.++. +++      |+++|||||||+||++|||++.|+          .|+.|++++|+|
T Consensus       250 ~~V~FTGS~---~~G~~i~~~aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~  325 (522)
T cd07123         250 AGLHFTGST---PTFKSLWKQIGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAY  325 (522)
T ss_pred             CEEEEECCH---HHHHHHHHHHHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence            334688886   999999988876 776      999999999999999999999986          355599999999


Q ss_pred             EecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHc-CCeEEeCCcccCCCCeeEeeEEeec
Q psy1099         422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQ-GGKLEAGGKRKGDKGYFIEPTVFSN  500 (605)
Q Consensus       422 v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~-g~~v~~gg~~~~~~g~~~~Pti~~~  500 (605)
                      ||++++|+|+++|++++.++++|+|.++.+++||+++..+++++++++++++++ |++++.||......|+|++|||+.+
T Consensus       326 V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~  405 (522)
T cd07123         326 VPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIET  405 (522)
T ss_pred             EcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeC
Confidence            999999999999999999999999999999999999999999999999999999 9999999976444689999999999


Q ss_pred             CCCCCcccccceeeeeeeeEeeCC--HHHHHHHhhcC-CCCceEEEEcCCHHHHHHHHHHcc--cCcccC---------C
Q psy1099         501 VTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDT-KYGLASGIVTTNIDTANTFAHAIN--AGSAVV---------P  566 (605)
Q Consensus       501 ~~~~~~~~~eE~FGPvl~i~~~~~--~~eai~~~n~~-~~gL~a~vft~d~~~~~~~~~~~~--~G~~~~---------~  566 (605)
                      ++++|++++||+||||++|++|++  ++|||+++|++ +|||++||||+|.+.+.+++++++  +|.+++         +
T Consensus       406 v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~  485 (522)
T cd07123         406 TDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVG  485 (522)
T ss_pred             CCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCC
Confidence            999999999999999999999995  79999999998 499999999999999999999974  898332         3


Q ss_pred             CCcccccCCCCCC-ChhHHHHHHHhhhceEEEEcC
Q psy1099         567 QAPFGGFKESGIG-RELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       567 ~~PfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      .+||||+|.||+| +++|++++++||+.|+++...
T Consensus       486 ~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~~  520 (522)
T cd07123         486 QQPFGGARASGTNDKAGSPLNLLRWVSPRTIKETF  520 (522)
T ss_pred             CCCCCcchhcCCCcccCCHHHHHHhcceEEEEEec
Confidence            5799999999996 999999999999999998754

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=1.1e-55  Score=477.10  Aligned_cols=238  Identities=41%  Similarity=0.655  Sum_probs=220.5

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hc-------ccccccCeEEEeccc
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YY-------CFVCAGSRTYVQEDI  426 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~-------~~c~a~~~v~v~~~~  426 (605)
                      ....|||++   .+|++|.+.++. +++|+++|||||||+||++|||++.|+    ++       +.|++++|+|||+++
T Consensus       196 ~~v~fTGs~---~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i  271 (456)
T cd07107         196 KRIALIGSV---PTGRAIMRAAAE-GIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESI  271 (456)
T ss_pred             CEEEEECcH---HHHHHHHHHHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHH
Confidence            344688886   999999988775 899999999999999999999999986    33       339999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVT  502 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~  502 (605)
                      +|+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||....    ..|+|++|||+.+++
T Consensus       272 ~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~  351 (456)
T cd07107         272 YDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVT  351 (456)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCC
Confidence            9999999999999999999999999999999999999999999999999999999996532    358999999999999


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCC
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKE  575 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~  575 (605)
                      ++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.+.+       +.+||||+|+
T Consensus       352 ~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~  431 (456)
T cd07107         352 PGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKN  431 (456)
T ss_pred             CCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCccc
Confidence            999999999999999999999999999999999999999999999999999999999998433       4579999999


Q ss_pred             CCCCChhHHHHHHHhhhceEEEEc
Q psy1099         576 SGIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       576 SG~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      ||+|+++|++++++||+.|+|+.+
T Consensus       432 SG~G~~~g~~~~~~~~~~k~v~~~  455 (456)
T cd07107         432 SGIGREECLEELLSYTQEKNVNVR  455 (456)
T ss_pred             ccCCcCchHHHHHHhhceEEEEEe
Confidence            999999999999999999999863

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=1.2e-55  Score=479.93  Aligned_cols=238  Identities=49%  Similarity=0.763  Sum_probs=220.5

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.|.+.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       225 d~V~fTGS~---~~g~~i~~~a~~-~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~  300 (484)
T cd07144         225 DKIAFTGST---ATGRLVMKAAAQ-NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIY  300 (484)
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH
Confidence            344678886   999999888776 899999999999999999999999987          355699999999999999


Q ss_pred             HHHHHHHHHHHhh-cccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCeeEeeEEeecCCC
Q psy1099         428 DTFVKKAVEKAAA-RKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       428 ~~~~~~l~~~~~~-~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~---~~g~~~~Pti~~~~~~  503 (605)
                      |+|++.|++++.+ +++|+|.++++++||++++.+++++.++++++++.|+++++||....   ..|+|++|||+.++++
T Consensus       301 d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~  380 (484)
T cd07144         301 DKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQ  380 (484)
T ss_pred             HHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCC
Confidence            9999999999985 89999999999999999999999999999999999999999997643   3689999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKES  576 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~S  576 (605)
                      ++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.+.+       +.+||||+|.|
T Consensus       381 ~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~S  460 (484)
T cd07144         381 DMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMS  460 (484)
T ss_pred             CCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999433       35799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEEc
Q psy1099         577 GIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+|+++|++++++||+.|+|+.+
T Consensus       461 G~G~~~g~~~l~~~t~~k~v~~~  483 (484)
T cd07144         461 GIGRELGEYGLETYTQTKAVHIN  483 (484)
T ss_pred             cCCCCchHHHHHHhhceEEEEEe
Confidence            99999999999999999999763

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=1.7e-55  Score=476.45  Aligned_cols=235  Identities=43%  Similarity=0.660  Sum_probs=219.8

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ...+|||++   .+|+.|.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       212 ~~v~fTGs~---~~g~~i~~~aa~-~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~  287 (465)
T cd07151         212 RLISFTGST---PVGRHIGELAGR-HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVY  287 (465)
T ss_pred             CEEEEECCH---HHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHH
Confidence            344688886   899999888876 999999999999999999999999986          455599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|.+++.++++|+|.++.+++||++++.+++++++++++++++|+++++||..   .|+|++|||+.++++++++
T Consensus       288 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~  364 (465)
T cd07151         288 DEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEI  364 (465)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCch
Confidence            9999999999999999999999999999999999999999999999999999999864   5899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIG  579 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G  579 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.+++        +.+||||+|.||+|
T Consensus       365 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G  444 (465)
T cd07151         365 AREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLG  444 (465)
T ss_pred             hhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCC
Confidence            9999999999999999999999999999999999999999999999999999998322        45799999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEc
Q psy1099         580 RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +++|++++++||+.|+++.+
T Consensus       445 ~~~g~~~l~~~t~~k~~~~~  464 (465)
T cd07151         445 RFNGEWALEEFTTDKWISVQ  464 (465)
T ss_pred             cCChHHHHHHhhceEEEEec
Confidence            99999999999999999864

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=1.4e-55  Score=478.91  Aligned_cols=237  Identities=57%  Similarity=0.906  Sum_probs=221.2

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...|||++   .+|+.|.+.++..+++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       222 d~V~fTGs~---~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~  298 (476)
T cd07091         222 DKIAFTGST---AVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIY  298 (476)
T ss_pred             CEEEEECcH---HHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHH
Confidence            344678886   9999998877755889999999999999999999999986          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++.+++||+++..+++++.+++++++++|+++++||+.....|+|++|||+.++++++++
T Consensus       299 ~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~  378 (476)
T cd07091         299 DEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKI  378 (476)
T ss_pred             HHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChh
Confidence            99999999999999999999999999999999999999999999999999999999875557899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|.||+|+
T Consensus       379 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~  458 (476)
T cd07091         379 AKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGR  458 (476)
T ss_pred             hhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCc
Confidence            9999999999999999999999999999999999999999999999999999998433       457999999999999


Q ss_pred             hhHHHHHHHhhhceEEE
Q psy1099         581 ELGKAALDEYTELKTVT  597 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~  597 (605)
                      ++|++++++||+.|+++
T Consensus       459 ~~g~~~~~~f~~~k~~~  475 (476)
T cd07091         459 ELGEEGLEEYTQVKAVT  475 (476)
T ss_pred             cchHHHHHHhhceeEEe
Confidence            99999999999999986

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=1.4e-55  Score=478.24  Aligned_cols=237  Identities=35%  Similarity=0.540  Sum_probs=221.3

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       218 ~v~fTGs~---~~g~~i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d  293 (478)
T cd07086         218 LVSFTGST---EVGRRVGETVAR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYD  293 (478)
T ss_pred             EEEEECcH---HHHHHHHHHHhc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHH
Confidence            34678886   999999888876 999999999999999999999999986          4556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC--CCeeEeeEEeecCCCCCc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD--KGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~--~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+++|++++.++++|+|.+.++++||++++.++++++++++++++.|+++++||+....  .|+|++|||+.+++++++
T Consensus       294 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~  373 (478)
T cd07086         294 EFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDAR  373 (478)
T ss_pred             HHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCCh
Confidence            999999999999999999999999999999999999999999999999999999976433  589999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHH--cccCccc--------CCCCcccccCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHA--INAGSAV--------VPQAPFGGFKES  576 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~--~~~G~~~--------~~~~PfGG~~~S  576 (605)
                      +++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++++  +++|.++        .+.+||||+|.|
T Consensus       374 ~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~S  453 (478)
T cd07086         374 IVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKET  453 (478)
T ss_pred             hhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccc
Confidence            999999999999999999999999999999999999999999999999999  9999832        245799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEEc
Q psy1099         577 GIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+|+++|++++++||+.|+|+.+
T Consensus       454 G~G~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07086         454 GGGRESGSDAWKQYMRRSTCTIN  476 (478)
T ss_pred             cCCccchHHHHHHhhceEEEEEe
Confidence            99999999999999999999875

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=1.6e-55  Score=473.69  Aligned_cols=236  Identities=38%  Similarity=0.576  Sum_probs=219.2

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+++++.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       199 ~~v~fTGs~---~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  274 (455)
T cd07120         199 DVISFTGST---ATGRAIMAAAAP-TLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIA  274 (455)
T ss_pred             CEEEEECCH---HHHHHHHHHHHh-cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHH
Confidence            334678886   999999988776 899999999999999999999999986          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC---CCeeEeeEEeecCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD---KGYFIEPTVFSNVTDD  504 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~---~g~~~~Pti~~~~~~~  504 (605)
                      ++|+++|++++.++++|+|.++++++||++++.+++++++++++++++|++++.||...+.   .|+|++|||+.+++++
T Consensus       275 ~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d  354 (455)
T cd07120         275 DEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPD  354 (455)
T ss_pred             HHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCC
Confidence            9999999999999999999999999999999999999999999999999999998754332   6899999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG  577 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG  577 (605)
                      |++++||+||||++|++|+|++|||+++|.++|||+++|||+|.+.+++++.++++|.+.+       +.+||||+|+||
T Consensus       355 ~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG  434 (455)
T cd07120         355 ADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSG  434 (455)
T ss_pred             ChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccc
Confidence            9999999999999999999999999999999999999999999999999999999998432       457999999999


Q ss_pred             CCChhHHHHHHHhhhceEEE
Q psy1099         578 IGRELGKAALDEYTELKTVT  597 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~  597 (605)
                      +|+++|++++++||+.|+|+
T Consensus       435 ~G~~~g~~~l~~ft~~k~v~  454 (455)
T cd07120         435 LGRLHGVAALEDFIEYKHIY  454 (455)
T ss_pred             cCccchHHHHHHHhceeEEe
Confidence            99999999999999999986

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=1.8e-55  Score=474.43  Aligned_cols=235  Identities=38%  Similarity=0.640  Sum_probs=220.5

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       194 ~V~fTGs~---~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d  269 (446)
T cd07106         194 KISFTGST---ATGKKVMASAAK-TLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYD  269 (446)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-cCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHH
Confidence            34678886   899999888776 999999999999999999999999997          4555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|+++++++++|+|.++++++||++++.++++++++++++..+|+++++||...+..|+|++|||+.+++++++++
T Consensus       270 ~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~  349 (446)
T cd07106         270 EFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIV  349 (446)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999997654568999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCCh
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRE  581 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~~  581 (605)
                      +||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+       +.+||||+|+||+|++
T Consensus       350 ~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~  429 (446)
T cd07106         350 DEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVE  429 (446)
T ss_pred             hcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCcc
Confidence            999999999999999999999999999999999999999999999999999999443       4679999999999999


Q ss_pred             hHHHHHHHhhhceEEE
Q psy1099         582 LGKAALDEYTELKTVT  597 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~  597 (605)
                      +|++++++||+.|+|+
T Consensus       430 ~g~~~~~~~t~~k~v~  445 (446)
T cd07106         430 FGIEGLKEYTQTQVIN  445 (446)
T ss_pred             chHHHHHHhhceeEEe
Confidence            9999999999999986

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=2.4e-55  Score=474.81  Aligned_cols=233  Identities=36%  Similarity=0.561  Sum_probs=215.2

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....||+++   .+|+.+.+.++   ++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       220 ~~v~fTGs~---~~g~~i~~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~  293 (472)
T TIGR03250       220 DLVTFTGGV---AIGKYIAARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVA  293 (472)
T ss_pred             CEEEEECcH---HHHHHHHHHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHH
Confidence            344678886   89999977653   68999999999999999999999986          355699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++.+++||+++..+++++++++++++++|+++++||..   .|+|++|||+.+++++|++
T Consensus       294 d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i  370 (472)
T TIGR03250       294 DRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTL  370 (472)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChH
Confidence            9999999999999999999999999999999999999999999999999999999864   5899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccCC--------CCcccccCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP--------QAPFGGFKESGIG  579 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~~--------~~PfGG~~~SG~G  579 (605)
                      ++||+||||++|++|+|.+||++++|+++|||++||||+|.+.+.++++++++|.++++        .+||||+|.||+|
T Consensus       371 ~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G  450 (472)
T TIGR03250       371 VREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLG  450 (472)
T ss_pred             HhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCC
Confidence            99999999999999999999999999999999999999999999999999999984332        3799999999999


Q ss_pred             -ChhHHHHHHHhhhceEEEEc
Q psy1099         580 -RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       580 -~~~g~~~~~~~~~~k~v~~~  599 (605)
                       +.+|++++++||+.|+++.+
T Consensus       451 ~~~g~~~~l~~ft~~k~i~~~  471 (472)
T TIGR03250       451 YKEGVQEAMKSFTNLKTYSLP  471 (472)
T ss_pred             CCCChHHHHHHhhceEEEEEe
Confidence             56678999999999999864

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=2e-55  Score=476.37  Aligned_cols=237  Identities=42%  Similarity=0.671  Sum_probs=220.1

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+...|||++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       210 v~~v~fTGs~---~~g~~i~~~aa~-~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i  285 (466)
T cd07138         210 VDMVSFTGST---RAGKRVAEAAAD-TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSR  285 (466)
T ss_pred             CCEEEEECcH---HHHHHHHHHHhc-cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhH
Confidence            3344688886   999999888876 899999999999999999999999986          35569999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCeeEeeEEeecCCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~---~~g~~~~Pti~~~~~~  503 (605)
                      +|+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||....   ..|+|++|||+.++++
T Consensus       286 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~  365 (466)
T cd07138         286 YAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTP  365 (466)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCC
Confidence            9999999999999999999999999999999999999999999999999999999986432   3589999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC------CCCcccccCCCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESG  577 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~------~~~PfGG~~~SG  577 (605)
                      ++++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.+.++++++++|.+.+      +.+||||+|.||
T Consensus       366 ~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~PfgG~k~SG  445 (466)
T cd07138         366 DMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAAFNPGAPFGGYKQSG  445 (466)
T ss_pred             CChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCcCCccccc
Confidence            99999999999999999999999999999999999999999999999999999999998443      367999999999


Q ss_pred             CCChhHHHHHHHhhhceEEE
Q psy1099         578 IGRELGKAALDEYTELKTVT  597 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~  597 (605)
                      +|+++|++++++||+.|+|+
T Consensus       446 ~G~~~g~~~~~~~~~~k~v~  465 (466)
T cd07138         446 NGREWGRYGLEEFLEVKSIQ  465 (466)
T ss_pred             CCccchHHHHHHhcceeEEe
Confidence            99999999999999999985

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=2.9e-55  Score=473.80  Aligned_cols=238  Identities=47%  Similarity=0.784  Sum_probs=221.9

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.|.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++++|||++++
T Consensus       198 d~v~fTGs~---~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~  273 (453)
T cd07115         198 DKITFTGST---AVGRKIMQGAAG-NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIY  273 (453)
T ss_pred             CEEEEECcH---HHHHHHHHHHhh-cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHH
Confidence            344678886   999999888776 899999999999999999999999986          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|++.|++++.++++|+|.++++++||++++.+++++.++++++.++|+++++||......|+|++|||+.++++++++
T Consensus       274 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~  353 (453)
T cd07115         274 DEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRI  353 (453)
T ss_pred             HHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChH
Confidence            99999999999999999999999999999999999999999999999999999999765446899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|.+|||+++|.++|||+++|||+|.+.+++++.++++|.+.       .+.+||||+|.||+|+
T Consensus       354 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~  433 (453)
T cd07115         354 AQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGR  433 (453)
T ss_pred             hhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCc
Confidence            999999999999999999999999999999999999999999999999999999843       3457999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEc
Q psy1099         581 ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~  599 (605)
                      ++|++++++||+.|+++.+
T Consensus       434 ~~g~~~~~~f~~~k~~~~~  452 (453)
T cd07115         434 EMGREALDEYTEVKSVWVN  452 (453)
T ss_pred             CchHHHHHHhhceEEEEEe
Confidence            9999999999999999763

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=2.8e-55  Score=472.92  Aligned_cols=236  Identities=48%  Similarity=0.773  Sum_probs=220.6

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...||+++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++++|||++++
T Consensus       200 ~~v~ftGs~---~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~  275 (454)
T cd07118         200 DMVSFTGST---RVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIA  275 (454)
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH
Confidence            334678885   899999988886 999999999999999999999999986          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++|++++.++++|+|.++.+++||++++.+++++.++++++++.|+++++||...+ ..|+|++|||+.+++++++
T Consensus       276 d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~  355 (454)
T cd07118         276 DAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMA  355 (454)
T ss_pred             HHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999997654 3689999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|.||+|
T Consensus       356 ~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G  435 (454)
T cd07118         356 IAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIG  435 (454)
T ss_pred             HHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999998433       46899999999999


Q ss_pred             ChhHHHHHHHhhhceEEE
Q psy1099         580 RELGKAALDEYTELKTVT  597 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~  597 (605)
                      +++|++++++||+.|+++
T Consensus       436 ~~~g~~~l~~~t~~k~~~  453 (454)
T cd07118         436 RELGRYGVEEYTELKTVH  453 (454)
T ss_pred             cCchHHHHHHHhceeEEe
Confidence            999999999999999985

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=1.9e-55  Score=474.35  Aligned_cols=232  Identities=27%  Similarity=0.421  Sum_probs=216.4

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|++.++.  .+|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       205 ~v~fTGs~---~~G~~i~~~aa~--~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d  279 (455)
T cd07148         205 FFSFIGSA---RVGWMLRSKLAP--GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIAD  279 (455)
T ss_pred             EEEEECCH---HHHHHHHHHhhc--CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHH
Confidence            44678886   999999888764  59999999999999999999999886          3556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||+..  .|+|++|||+.+++++++++
T Consensus       280 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~  357 (455)
T cd07148         280 DFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVS  357 (455)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999764  47899999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGR  580 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G~  580 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.+.+        +.+||||+|.||+|+
T Consensus       358 ~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~  437 (455)
T cd07148         358 TQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGT  437 (455)
T ss_pred             hCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCC
Confidence            999999999999999999999999999999999999999999999999999998433        236999999999999


Q ss_pred             hhHHHHHHHhhhceEEE
Q psy1099         581 ELGKAALDEYTELKTVT  597 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~  597 (605)
                      ++|.+++++||+.|+++
T Consensus       438 ~~g~~~~~~~~~~k~~~  454 (455)
T cd07148         438 GGIPYTMHDMTQEKMAV  454 (455)
T ss_pred             CchHHHHHHhhceeEEe
Confidence            99999999999999985

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=3.1e-55  Score=474.19  Aligned_cols=236  Identities=37%  Similarity=0.577  Sum_probs=220.5

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       199 ~V~ftGs~---~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d  274 (453)
T cd07099         199 KVAFTGSV---ATGRKVMAAAAE-RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYD  274 (453)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHH
Confidence            34678886   999999988876 899999999999999999999999986          4555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|.+++.++++|+|.++++++||++++.++++++++++++++.|+++++||......|+|++|||+.+++++|+++
T Consensus       275 ~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~  354 (453)
T cd07099         275 EFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVM  354 (453)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999997643468999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIG  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~SG~G  579 (605)
                      +||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.+++         +.+||||+|.||+|
T Consensus       355 ~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g  434 (453)
T cd07099         355 REETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG  434 (453)
T ss_pred             hCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC
Confidence            999999999999999999999999999999999999999999999999999998332         46899999999999


Q ss_pred             ChhHHHHHHHhhhceEEEE
Q psy1099         580 RELGKAALDEYTELKTVTE  598 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~  598 (605)
                      +++|++++++||+.|++++
T Consensus       435 ~~~g~~~~~~~t~~k~v~~  453 (453)
T cd07099         435 RRHGAEGLREFCRPKAIAR  453 (453)
T ss_pred             ccChHHHHHHhcceEEEeC
Confidence            9999999999999999863

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=3.4e-55  Score=477.38  Aligned_cols=238  Identities=30%  Similarity=0.428  Sum_probs=218.1

Q ss_pred             eeEEEecCCccccHHHHHHHHHhcccc------ceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEE
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLK------RVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~------~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v  422 (605)
                      ..+|||+.   .+|+.|.+.++. +++      ++++|||||||+||++|||++.|+          .|+.|++++|+||
T Consensus       251 ~V~FTGS~---~~G~~i~~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V  326 (533)
T TIGR01236       251 GIHFTGST---ATFKHLWKWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYV  326 (533)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEE
Confidence            34678885   999999988876 776      499999999999999999999986          4555999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcC--CeEEeCCcccCCCCeeEeeEEeec
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQG--GKLEAGGKRKGDKGYFIEPTVFSN  500 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g--~~v~~gg~~~~~~g~~~~Pti~~~  500 (605)
                      |++++|+|+++|++++.++++|+|.++.+++||++++.+++++.+++++++++|  +++++||......|+|++|||+.+
T Consensus       327 ~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~  406 (533)
T TIGR01236       327 PHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILS  406 (533)
T ss_pred             chhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEec
Confidence            999999999999999999999999999999999999999999999999999997  799999976444689999999999


Q ss_pred             CCCCCcccccceeeeeeeeEeeCC--HHHHHHHh-hcCCCCceEEEEcCCHHHHHHHHHHcc--cCcccC---------C
Q psy1099         501 VTDDFKIAREEIFGPVQTIIKFKT--LDEVIERA-NDTKYGLASGIVTTNIDTANTFAHAIN--AGSAVV---------P  566 (605)
Q Consensus       501 ~~~~~~~~~eE~FGPvl~i~~~~~--~~eai~~~-n~~~~gL~a~vft~d~~~~~~~~~~~~--~G~~~~---------~  566 (605)
                      ++++|++++||+||||++|++|+|  ++|||+++ |.++|||+++|||+|.+.+.+++++++  +|.+++         +
T Consensus       407 ~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~  486 (533)
T TIGR01236       407 KDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVG  486 (533)
T ss_pred             CCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCC
Confidence            999999999999999999999998  59999999 889999999999999999999999977  898332         3


Q ss_pred             CCcccccCCCCCC-ChhHHHHHHHhhhceEEEEcC
Q psy1099         567 QAPFGGFKESGIG-RELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       567 ~~PfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      .+||||+|.||+| +++|.+++++||+.|+++...
T Consensus       487 ~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~  521 (533)
T TIGR01236       487 QQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETF  521 (533)
T ss_pred             CCCCCCcccccCCcccCCHHHHHHhcceEEEEEEc
Confidence            5799999999998 999999999999999998754

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=2.9e-55  Score=473.41  Aligned_cols=236  Identities=41%  Similarity=0.672  Sum_probs=220.4

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.+++.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++++|||++++
T Consensus       204 ~~v~ftGs~---~~g~~v~~~aa~-~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~  279 (459)
T cd07089         204 DMVSFTGST---AVGRRIMAQAAA-TLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRY  279 (459)
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHH
Confidence            334678886   999999988876 899999999999999999999999986          466699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~~  505 (605)
                      ++|+++|++++.++++|+|.++.+++||+++..+++++++++++++++|+++++||....  ..|+|++|||+.++++++
T Consensus       280 ~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~  359 (459)
T cd07089         280 DEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDM  359 (459)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCC
Confidence            999999999999999999999999999999999999999999999999999999997543  368999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI  578 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~  578 (605)
                      ++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|.||+
T Consensus       360 ~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~  439 (459)
T cd07089         360 RIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGL  439 (459)
T ss_pred             HHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccC
Confidence            999999999999999999999999999999999999999999999999999999998433       4579999999999


Q ss_pred             CChhHHHHHHHhhhceEEE
Q psy1099         579 GRELGKAALDEYTELKTVT  597 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~  597 (605)
                      |+++|++++++||+.|+|.
T Consensus       440 G~~~g~~~l~~ft~~k~v~  458 (459)
T cd07089         440 GRENGIEGLEEFLETKSIA  458 (459)
T ss_pred             CCCchHHHHHHhhceeEEe
Confidence            9999999999999999986

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=3e-55  Score=474.15  Aligned_cols=237  Identities=44%  Similarity=0.747  Sum_probs=220.5

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       197 ~v~fTGs~---~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d  272 (457)
T cd07090         197 KVSFTGSV---PTGKKVMSAAAK-GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKD  272 (457)
T ss_pred             EEEEECcH---HHHHHHHHHHhc-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHH
Confidence            34678885   899999888776 999999999999999999999999986          3555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-----CCCeeEeeEEeecCCC
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-----DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-----~~g~~~~Pti~~~~~~  503 (605)
                      +|+++|.+++.++++|+|.++.+++||+++..+++++.++++++++.|++++.||....     ..|+|++|||+.++++
T Consensus       273 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~  352 (457)
T cd07090         273 EFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTD  352 (457)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCC
Confidence            99999999999999999999999999999999999999999999999999999997532     3589999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKES  576 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~S  576 (605)
                      +|++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|.|
T Consensus       353 ~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~S  432 (457)
T cd07090         353 DMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQS  432 (457)
T ss_pred             CChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccC
Confidence            99999999999999999999999999999999999999999999999999999999999443       34799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEEc
Q psy1099         577 GIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+|+++|++++++||+.|+++.+
T Consensus       433 G~G~~~g~~~~~~f~~~k~~~~~  455 (457)
T cd07090         433 GFGRENGTAALEHYTQLKTVYVE  455 (457)
T ss_pred             cCCccchHHHHHHHhCeEEEEEe
Confidence            99999999999999999999864

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=5.3e-55  Score=471.52  Aligned_cols=233  Identities=29%  Similarity=0.413  Sum_probs=214.3

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||||+   .+|+.|++.++. +++|+++|||||||+||++|||++.|+          .|+.|++++++|||++++|
T Consensus       188 ~i~FTGS~---~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d  263 (493)
T PTZ00381        188 HIFFTGSP---RVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKD  263 (493)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHH
Confidence            34688886   999999988776 999999999999999999999999986          3556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|++.|++.+.+++ |++.++++++||+++..+++++.+++++   .|++++.||.. +..++|++|||+.+++++|++|
T Consensus       264 ~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~~---~ga~~~~gG~~-~~~~~~i~Ptvl~~v~~~~~i~  338 (493)
T PTZ00381        264 KFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYGGEV-DIENKYVAPTIIVNPDLDSPLM  338 (493)
T ss_pred             HHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHHh---CCCcEEECCCc-CCCCCeEeeEEEecCCCCChHH
Confidence            99999999999986 7666788999999999999999999963   58999999975 3468899999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFKESGIG  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~~SG~G  579 (605)
                      +||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|++.         .+.+||||+|.||+|
T Consensus       339 ~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G  418 (493)
T PTZ00381        339 QEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMG  418 (493)
T ss_pred             hccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCccccc
Confidence            99999999999999999999999999999999999999999999999999999832         246799999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEcC
Q psy1099         580 RELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      ++||.++|++||+.|+|+.++
T Consensus       419 ~~~G~~g~~~fs~~k~v~~~~  439 (493)
T PTZ00381        419 AYHGKYGFDTFSHPKPVLNKS  439 (493)
T ss_pred             ccchHHHHHhccceeEEEEcc
Confidence            999999999999999999886

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=4.3e-55  Score=474.58  Aligned_cols=236  Identities=40%  Similarity=0.595  Sum_probs=218.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCC------CCHHHHH---------hcccccccCeEEE
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD------ADVDMAY---------YYCFVCAGSRTYV  422 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~d------ad~~~a~---------~~~~c~a~~~v~v  422 (605)
                      ...+|||++   .+|++|.+.++. +++|+++|||||||+||++|      ||++.|+         .|+.|++++|+||
T Consensus       216 ~~V~fTGS~---~~G~~i~~~aa~-~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~~~GQ~C~a~~rv~V  291 (479)
T cd07116         216 AKVAFTGET---TTGRLIMQYASE-NIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALI  291 (479)
T ss_pred             CEEEEECCH---HHHHHHHHHHHc-CCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHhcCCCCCCCCeEEEE
Confidence            344789986   999999988876 89999999999999999987      7999886         3555999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEe
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVF  498 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~  498 (605)
                      |++++|+|+++|.++++++++|+|.++.+++||+++..+++++++++++++++|++++.||....    ..|+|++|||+
T Consensus       292 ~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl  371 (479)
T cd07116         292 QESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTF  371 (479)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEE
Confidence            99999999999999999999999999999999999999999999999999999999999997532    36899999999


Q ss_pred             ecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCccc
Q psy1099         499 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFG  571 (605)
Q Consensus       499 ~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfG  571 (605)
                      .+++ ++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.+++       +.+|||
T Consensus       372 ~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfG  450 (479)
T cd07116         372 KGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFG  450 (479)
T ss_pred             ccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcC
Confidence            8874 99999999999999999999999999999999999999999999999999999999999443       357999


Q ss_pred             ccCCCCCCChhHHHHHHHhhhceEEEE
Q psy1099         572 GFKESGIGRELGKAALDEYTELKTVTE  598 (605)
Q Consensus       572 G~~~SG~G~~~g~~~~~~~~~~k~v~~  598 (605)
                      |+|.||+|+++|++++++||+.|+++.
T Consensus       451 G~k~SG~G~~~g~~~l~~~~~~k~~~~  477 (479)
T cd07116         451 GYKQSGIGRENHKMMLDHYQQTKNLLV  477 (479)
T ss_pred             CCccCcCCccChHHHHHHhhceEEEEE
Confidence            999999999999999999999999976

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=3.5e-55  Score=473.09  Aligned_cols=233  Identities=38%  Similarity=0.602  Sum_probs=217.5

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       228 ~v~ftGs~---~~g~~v~~~aa~-~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d  303 (480)
T cd07111         228 KVAFTGST---EVGRALRRATAG-TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAE  303 (480)
T ss_pred             EEEEECCH---HHHHHHHHHHhc-cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHH
Confidence            34678886   899999888775 899999999999999999999999986          3566999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|++++.||...+..|+|++|||+.+++++++++
T Consensus       304 ~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~  383 (480)
T cd07111         304 ELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIA  383 (480)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999987544579999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCCh
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRE  581 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~~  581 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.+.+       +.+||||+|.||+|++
T Consensus       384 ~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~  463 (480)
T cd07111         384 QEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGRE  463 (480)
T ss_pred             cCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCcc
Confidence            999999999999999999999999999999999999999999999999999998433       3579999999999999


Q ss_pred             hHHHHHHHhhhceE
Q psy1099         582 LGKAALDEYTELKT  595 (605)
Q Consensus       582 ~g~~~~~~~~~~k~  595 (605)
                      +|++++++||+.|+
T Consensus       464 ~g~~~~~~~~~~k~  477 (480)
T cd07111         464 GGKEGLYEYLRPSW  477 (480)
T ss_pred             chHHHHHHHhhccC
Confidence            99999999999885

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=4.4e-55  Score=472.76  Aligned_cols=233  Identities=41%  Similarity=0.639  Sum_probs=218.1

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       205 ~V~fTGs~---~~g~~i~~~aa~-~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d  280 (456)
T cd07145         205 MISFTGST---AVGLLIASKAGG-TGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYD  280 (456)
T ss_pred             EEEEECCH---HHHHHHHHHHhh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHH
Confidence            33578886   899999888876 999999999999999999999999986          3556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+|.++++++||+++..+++++++++++++++|+++++||..+  .|+|++|||+.+++++++++
T Consensus       281 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~  358 (456)
T cd07145         281 KFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVM  358 (456)
T ss_pred             HHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHh
Confidence            9999999999999999999999999999999999999999999999999999999754  38999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGR  580 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G~  580 (605)
                      +||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.+++        +.+||||+|.||+|+
T Consensus       359 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~  438 (456)
T cd07145         359 KEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGR  438 (456)
T ss_pred             hCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCc
Confidence            999999999999999999999999999999999999999999999999999998322        357999999999999


Q ss_pred             hhHHHHHHHhhhceEEE
Q psy1099         581 ELGKAALDEYTELKTVT  597 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~  597 (605)
                      ++|++++++||+.|+|+
T Consensus       439 ~~g~~~l~~f~~~k~v~  455 (456)
T cd07145         439 EGVRYTMLEMTEEKTIV  455 (456)
T ss_pred             CchHHHHHHhhceeEEe
Confidence            99999999999999986

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=4.9e-55  Score=476.48  Aligned_cols=238  Identities=37%  Similarity=0.558  Sum_probs=218.5

Q ss_pred             ceeEEEecCCccccHHHHHHHHHh-----ccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEE
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAA-----SNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~-----~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v  422 (605)
                      ...+|||+.   .+|+.+++.++.     ++++|+++|||||||+||++|||++.|+          .|+.|++++|+||
T Consensus       248 ~~V~fTGs~---~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V  324 (511)
T TIGR01237       248 HLITFTGSR---EVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVV  324 (511)
T ss_pred             CeEEEECch---HHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEE
Confidence            334678886   899999887763     4899999999999999999999999986          4556999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCC
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVT  502 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~  502 (605)
                      |++++|+|+++|.+++.++++|+|.++++++||+++..+++++++++++++++| +++.||......|+|++|||+.+++
T Consensus       325 ~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~  403 (511)
T TIGR01237       325 LSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVD  403 (511)
T ss_pred             ehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCC
Confidence            999999999999999999999999999999999999999999999999999888 8888887544568999999999999


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCccccc
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGF  573 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~  573 (605)
                      ++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++         +.+||||+
T Consensus       404 ~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~  483 (511)
T TIGR01237       404 RHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGF  483 (511)
T ss_pred             CCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcc
Confidence            999999999999999999999999999999999999999999999999999999999998332         24799999


Q ss_pred             CCCCCCC-hhHHHHHHHhhhceEEEEc
Q psy1099         574 KESGIGR-ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       574 ~~SG~G~-~~g~~~~~~~~~~k~v~~~  599 (605)
                      |.||+|+ .+|++++++||+.|+|+.+
T Consensus       484 k~SG~G~~~~g~~~l~~~~~~k~v~~~  510 (511)
T TIGR01237       484 KMSGTDSKAGGPDYLLQFMQPKTVTEN  510 (511)
T ss_pred             ccccCCCcCCCHHHHHHhcceEEEEEe
Confidence            9999995 6899999999999999864

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=6.4e-55  Score=471.12  Aligned_cols=236  Identities=47%  Similarity=0.698  Sum_probs=219.3

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCC-CHHHHH----------hcccccccCeEEEecccH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADA-DVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~da-d~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ...|||++   .+|+.+++.++.+++||+++|+||+||+||++|| |++.|+          .|+.|++++|+|||++++
T Consensus       206 ~V~fTGs~---~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~  282 (462)
T cd07112         206 ALAFTGST---EVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIK  282 (462)
T ss_pred             EEEEECCH---HHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHH
Confidence            34678885   8999998888744899999999999999999999 999986          455599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~~  505 (605)
                      ++|+++|.+++.++++|+|.++++++||++++.+++++.++++++++.|+++++||....  ..|+|++|||+.++++++
T Consensus       283 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~  362 (462)
T cd07112         283 DEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDM  362 (462)
T ss_pred             HHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999987532  258999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI  578 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~  578 (605)
                      ++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.+.++++++++|.+.+       +.+||||+|.||+
T Consensus       363 ~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~  442 (462)
T cd07112         363 RIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGN  442 (462)
T ss_pred             hHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccC
Confidence            999999999999999999999999999999999999999999999999999999998433       4579999999999


Q ss_pred             CChhHHHHHHHhhhceEEE
Q psy1099         579 GRELGKAALDEYTELKTVT  597 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~  597 (605)
                      |+++|++++++||+.|++.
T Consensus       443 G~~~g~~~~~~f~~~k~i~  461 (462)
T cd07112         443 GRDKSLHALDKYTELKTTW  461 (462)
T ss_pred             CccchHHHHHHHhceeEEE
Confidence            9999999999999999985

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=5.3e-55  Score=473.17  Aligned_cols=233  Identities=48%  Similarity=0.794  Sum_probs=216.6

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...|||++   .+|+.|.+.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       214 ~~V~fTGs~---~~g~~v~~~a~~-~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  289 (467)
T TIGR01804       214 AKVSFTGGV---PTGKKIMAAAAD-HLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIK  289 (467)
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHH
Confidence            344678886   999999988776 899999999999999999999999886          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~~  503 (605)
                      |+|+++|++++.++++|+|.++++++||+++..+.++++++++++.+.|+++++||....    ..|+|++|||+.++++
T Consensus       290 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~  369 (467)
T TIGR01804       290 EKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTD  369 (467)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCC
Confidence            999999999999999999999999999999999999999999999999999999997532    2589999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKES  576 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~S  576 (605)
                      ++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.+.+       +.+||||+|+|
T Consensus       370 ~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~S  449 (467)
T TIGR01804       370 DMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQS  449 (467)
T ss_pred             CChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999432       35799999999


Q ss_pred             CCCChhHHHHHHHhhhce
Q psy1099         577 GIGRELGKAALDEYTELK  594 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k  594 (605)
                      |+|+++|++++++||+.|
T Consensus       450 G~G~~~g~~~~~~~~~~~  467 (467)
T TIGR01804       450 GIGRENGKAGLAEYTEVK  467 (467)
T ss_pred             ccCCCChHHHHHHHhccC
Confidence            999999999999999875

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>KOG2456|consensus

Probab=100.00  E-value=4.8e-56  Score=436.06  Aligned_cols=231  Identities=29%  Similarity=0.451  Sum_probs=210.2

Q ss_pred             EEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hcc------cccccCeEEEecccHHHH
Q psy1099         361 TVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYC------FVCAGSRTYVQEDIYDTF  430 (605)
Q Consensus       361 ~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~~------~c~a~~~v~v~~~~~~~~  430 (605)
                      .+|+++   ++|+.++.+++. +++||+||||||||++|++|+|++.++    ||+      .|.++.-++++.+++.++
T Consensus       185 fyTGsp---~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kl  260 (477)
T KOG2456|consen  185 FYTGSP---RVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKL  260 (477)
T ss_pred             EecCCc---hHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHH
Confidence            578887   999988777765 999999999999999999999999987    444      488888899999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccccc
Q psy1099         431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIARE  510 (605)
Q Consensus       431 ~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~e  510 (605)
                      +++++..+++. +|+..+++.+++.+||..+++|+..++++.    .+|+.||+.+ +...|++|||+.|+++++++|+|
T Consensus       261 i~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d-~~d~~I~PTIL~DV~~~~p~M~e  334 (477)
T KOG2456|consen  261 IDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESD-ESDRYIAPTILLDVPEDSPVMQE  334 (477)
T ss_pred             HHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccc-hhhcccCCeEEecCCCCChhhhh
Confidence            99998888775 688888899999999999999999998764    6899999864 45679999999999999999999


Q ss_pred             ceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccCCCCCCCh
Q psy1099         511 EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFKESGIGRE  581 (605)
Q Consensus       511 E~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~~SG~G~~  581 (605)
                      |+|||||||+.++|++|+|+++|+.+.+|++|+||+|.+..++++.++++|++.         ...+||||+|.||||+|
T Consensus       335 EIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~Y  414 (477)
T KOG2456|consen  335 EIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRY  414 (477)
T ss_pred             hhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCccccccc
Confidence            999999999999999999999999999999999999999999999999999943         35689999999999999


Q ss_pred             hHHHHHHHhhhceEEEEcCC
Q psy1099         582 LGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~~~~~  601 (605)
                      ||+++|+.|+|+|++..+++
T Consensus       415 hGK~sFdTFSH~k~~l~rs~  434 (477)
T KOG2456|consen  415 HGKFSFDTFSHEKSCLLRSL  434 (477)
T ss_pred             cccccccccccchhhhhccc
Confidence            99999999999999986654

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=6.9e-55  Score=473.08  Aligned_cols=236  Identities=46%  Similarity=0.725  Sum_probs=220.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....||+++   .+|+.|.+.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       214 ~~V~ftGs~---~~g~~i~~~aa~-~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~  289 (468)
T cd07088         214 GMISLTGST---EAGQKIMEAAAE-NITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIY  289 (468)
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHH
Confidence            344678886   999999988776 999999999999999999999999986          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+.++++++.
T Consensus       290 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~  369 (468)
T cd07088         290 DEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDME  369 (468)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCc
Confidence            999999999999999999999999999999999999999999999999999999997643 4689999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccCC-------CCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~~-------~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++|       ..||||+|.||+|
T Consensus       370 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G  449 (468)
T cd07088         370 IVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLG  449 (468)
T ss_pred             hhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCC
Confidence            999999999999999999999999999999999999999999999999999999995433       3599999999999


Q ss_pred             ChhHHHHHHHhhhceEEE
Q psy1099         580 RELGKAALDEYTELKTVT  597 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~  597 (605)
                      +++|++++++||+.|+|+
T Consensus       450 ~~~g~~~l~~~t~~k~v~  467 (468)
T cd07088         450 GADGKHGLEEYLQTKVVY  467 (468)
T ss_pred             cCchHHHHHHHhceeEEe
Confidence            999999999999999985

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=7.2e-55  Score=475.72  Aligned_cols=237  Identities=39%  Similarity=0.606  Sum_probs=218.3

Q ss_pred             eeEEEecCCccccHHHHHHHHHhc-----cccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEe
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAAS-----NLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQ  423 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~-----~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~  423 (605)
                      ...||+++   .+|+.|.+.++..     +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||
T Consensus       248 ~V~fTGs~---~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~  324 (512)
T cd07124         248 FIAFTGSR---EVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVH  324 (512)
T ss_pred             EEEEeCch---HHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEc
Confidence            34678886   8999998877743     699999999999999999999999986          45559999999999


Q ss_pred             cccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC--CCeeEeeEEeecC
Q psy1099         424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD--KGYFIEPTVFSNV  501 (605)
Q Consensus       424 ~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~--~g~~~~Pti~~~~  501 (605)
                      ++++|+|+++|++++.++++|+|.++.+++||++++.+++++.++++++.+ |+++++||...+.  .|+|++|||+.++
T Consensus       325 ~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v  403 (512)
T cd07124         325 ESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADV  403 (512)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecC
Confidence            999999999999999999999999999999999999999999999999988 8999999976432  6999999999999


Q ss_pred             CCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccc
Q psy1099         502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGG  572 (605)
Q Consensus       502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG  572 (605)
                      ++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++         +.+||||
T Consensus       404 ~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG  483 (512)
T cd07124         404 PPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGG  483 (512)
T ss_pred             CCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999998432         3479999


Q ss_pred             cCCCCCC-ChhHHHHHHHhhhceEEEEc
Q psy1099         573 FKESGIG-RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       573 ~~~SG~G-~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +|+||+| +++|++++++||+.|+|+.+
T Consensus       484 ~k~SG~G~~~~g~~~~~~~t~~k~v~~~  511 (512)
T cd07124         484 FKMSGTGSKAGGPDYLLQFMQPKTVTEN  511 (512)
T ss_pred             cccccCCCccCcHHHHHHhccEEEEEEe
Confidence            9999999 77889999999999999864

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=1.2e-54  Score=469.46  Aligned_cols=236  Identities=34%  Similarity=0.528  Sum_probs=219.7

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|++|.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++++|||++++
T Consensus       196 ~~V~fTGs~---~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~  271 (452)
T cd07102         196 DHVSFTGSV---AGGRAIQRAAAG-RFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIY  271 (452)
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHH
Confidence            344678886   899999887775 899999999999999999999999986          456699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc---CCCCeeEeeEEeecCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK---GDKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~---~~~g~~~~Pti~~~~~~~  504 (605)
                      |+|+++|++++.++++|+|.++.+++||+++..+++++++++++++++|+++++||...   +..|+|++|||+.+++++
T Consensus       272 ~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~  351 (452)
T cd07102         272 DAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHS  351 (452)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCC
Confidence            99999999999999999999999999999999999999999999999999999998653   246899999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG  577 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG  577 (605)
                      |++++||+||||++|++|+|++|||+++|.++|||+++|||+|.+.++++++++++|.+++       +..||||+|+||
T Consensus       352 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG  431 (452)
T cd07102         352 MRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSG  431 (452)
T ss_pred             ChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccc
Confidence            9999999999999999999999999999999999999999999999999999999998443       347999999999


Q ss_pred             CCChhHHHHHHHhhhceEEE
Q psy1099         578 IGRELGKAALDEYTELKTVT  597 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~  597 (605)
                      +|+++|.+++++||+.|+++
T Consensus       432 ~G~~~g~~~~~~~~~~k~~~  451 (452)
T cd07102         432 RGVTLSRLGYDQLTRPKSYH  451 (452)
T ss_pred             cCccchHHHHHHHhceeEEe
Confidence            99999999999999999985

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=8.5e-55  Score=472.41  Aligned_cols=235  Identities=41%  Similarity=0.659  Sum_probs=219.2

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++++|||++++|
T Consensus       218 ~v~ftGs~---~~g~~v~~~~~~-~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d  293 (471)
T cd07139         218 KVSFTGST---AAGRRIAAVCGE-RLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYD  293 (471)
T ss_pred             EEEEECcH---HHHHHHHHHHHh-cCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHH
Confidence            34678886   899999887775 899999999999999999999999986          3555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCCCc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+++|++++.++++|+|.++.+++||++++.++++++++++++.++|+++++||....  ..|+|++|||+.+++++++
T Consensus       294 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~  373 (471)
T cd07139         294 EVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMR  373 (471)
T ss_pred             HHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcch
Confidence            99999999999999999999999999999999999999999999999999999997543  3589999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC------CCCcccccCCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGIGR  580 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~------~~~PfGG~~~SG~G~  580 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+      +.+||||+|.||+|+
T Consensus       374 ~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~PfgG~k~SG~G~  453 (471)
T cd07139         374 IAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFRLDFGAPFGGFKQSGIGR  453 (471)
T ss_pred             HHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcccccCCc
Confidence            99999999999999999999999999999999999999999999999999999999443      358999999999999


Q ss_pred             hhHHHHHHHhhhceEEE
Q psy1099         581 ELGKAALDEYTELKTVT  597 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~  597 (605)
                      ++|++++++||+.|+|+
T Consensus       454 ~~g~~~~~~ft~~k~i~  470 (471)
T cd07139         454 EGGPEGLDAYLETKSIY  470 (471)
T ss_pred             cchHHHHHHHhceeEEe
Confidence            99999999999999986

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=1.2e-54  Score=469.20  Aligned_cols=234  Identities=40%  Similarity=0.615  Sum_probs=216.4

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|.+.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       199 ~v~ftGs~---~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~  274 (454)
T cd07109         199 HISFTGSV---ETGIAVMRAAAE-NVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYD  274 (454)
T ss_pred             EEEEECCH---HHHHHHHHHHhh-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHH
Confidence            34678885   999999888775 899999999999999999999999986          3455999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCeeEeeEEeecCCCCC
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~---~~g~~~~Pti~~~~~~~~  505 (605)
                      +|+++|++++.++++|+|.+ ++++||++++.+++++.++++++++.|++++.||....   ..|+|++|||+.++++++
T Consensus       275 ~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~  353 (454)
T cd07109         275 EVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDS  353 (454)
T ss_pred             HHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCC
Confidence            99999999999999999986 68999999999999999999999999999999986532   368999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESG  577 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG  577 (605)
                      ++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+        +.+||||+|.||
T Consensus       354 ~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG  433 (454)
T cd07109         354 RLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSG  433 (454)
T ss_pred             hhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCc
Confidence            999999999999999999999999999999999999999999999999999999998322        347999999999


Q ss_pred             CCChhHHHHHHHhhhceEEE
Q psy1099         578 IGRELGKAALDEYTELKTVT  597 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~  597 (605)
                      +|+++|++++++||+.|+|+
T Consensus       434 ~G~~~g~~~~~~f~~~k~i~  453 (454)
T cd07109         434 HGREKGLEALYNYTQTKTVA  453 (454)
T ss_pred             CCccchHHHHHHHhceeEEe
Confidence            99999999999999999985

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=5.5e-55  Score=485.32  Aligned_cols=239  Identities=22%  Similarity=0.282  Sum_probs=219.3

Q ss_pred             eEEEecCCccccHHHHHHHH-HhccccceeeecCCCCcEEEcCCCC-----HHHHH----------hcccccccCeEEEe
Q psy1099         360 KTVTESPLRSYTSHSIMAAA-AASNLKRVSLELGGKSPLVICADAD-----VDMAY----------YYCFVCAGSRTYVQ  423 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~-a~~~~~~~~lElgG~~p~iV~~dad-----~~~a~----------~~~~c~a~~~v~v~  423 (605)
                      .+||||.   .+|++|.+.+ ++++++|+++|||||||+||++|||     ++.|+          .|+.|++++|+|||
T Consensus       225 V~FTGS~---~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~  301 (663)
T TIGR02278       225 VAFTGSA---ATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVP  301 (663)
T ss_pred             EEEECCH---HHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEe
Confidence            4689986   9999999864 3458999999999999999999999     99886          45569999999999


Q ss_pred             cccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCC
Q psy1099         424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTD  503 (605)
Q Consensus       424 ~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~  503 (605)
                      ++++|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||... ..|+|++|||+.++++
T Consensus       302 ~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~  380 (663)
T TIGR02278       302 KALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDP  380 (663)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCc
Confidence            999999999999999999999999999999999999999999999999999999999999753 3589999999999998


Q ss_pred             CC-cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHc--ccCcccC---------------
Q psy1099         504 DF-KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI--NAGSAVV---------------  565 (605)
Q Consensus       504 ~~-~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~--~~G~~~~---------------  565 (605)
                      +| .+++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++  ++|.+++               
T Consensus       381 ~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~  460 (663)
T TIGR02278       381 WAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSP  460 (663)
T ss_pred             chhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCC
Confidence            86 79999999999999999999999999999999999999999999999999999  7998553               


Q ss_pred             -CCCcccccCCCCCCCh-hHHHHHHHhhhceEEEEcCCC
Q psy1099         566 -PQAPFGGFKESGIGRE-LGKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       566 -~~~PfGG~~~SG~G~~-~g~~~~~~~~~~k~v~~~~~~  602 (605)
                       +.+||||+|.||+|++ +|.+++++||+.|+|+..|+.
T Consensus       461 ~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~~~~~  499 (663)
T TIGR02278       461 LPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQGSPWL  499 (663)
T ss_pred             CCCCCCCCCccCcCCCccchHHHHHHhceeEEEEcCHHH
Confidence             2479999999999999 468999999999999976653

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=1.4e-54  Score=471.46  Aligned_cols=238  Identities=44%  Similarity=0.697  Sum_probs=220.5

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...|||++   .+|+.|.+.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       216 d~V~ftGs~---~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  291 (478)
T cd07131         216 DVVSFTGST---EVGERIGETCAR-PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVY  291 (478)
T ss_pred             CEEEEECcH---HHHHHHHHHHhh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhH
Confidence            344678886   999999888775 999999999999999999999999986          345599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~~  503 (605)
                      ++|+++|.+++.++++|+|.++.+++||++++.+++++.++++++++.|++++.||....    ..|+|++|||+.++++
T Consensus       292 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~  371 (478)
T cd07131         292 DEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTP  371 (478)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCC
Confidence            999999999999999999999999999999999999999999999999999999997532    3689999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKE  575 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~  575 (605)
                      ++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.        .+.+||||+|.
T Consensus       372 ~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~  451 (478)
T cd07131         372 DMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKK  451 (478)
T ss_pred             CChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccc
Confidence            9999999999999999999999999999999999999999999999999999999999832        24589999999


Q ss_pred             CCCC-ChhHHHHHHHhhhceEEEEc
Q psy1099         576 SGIG-RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       576 SG~G-~~~g~~~~~~~~~~k~v~~~  599 (605)
                      ||+| +++|++++++||+.|+|+.+
T Consensus       452 SG~G~~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07131         452 SGNGHREAGTTALDAFTEWKAVYVD  476 (478)
T ss_pred             ccCCCcCCcHHHHHHhhheEEEEEe
Confidence            9999 77899999999999999875

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=7.3e-55  Score=471.48  Aligned_cols=237  Identities=27%  Similarity=0.350  Sum_probs=215.5

Q ss_pred             eEEEecCCccccHHHHHHHHH-hccccceeeecCCCCcEEEcCCCC-----HHHHH----------hcccccccCeEEEe
Q psy1099         360 KTVTESPLRSYTSHSIMAAAA-ASNLKRVSLELGGKSPLVICADAD-----VDMAY----------YYCFVCAGSRTYVQ  423 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a-~~~~~~~~lElgG~~p~iV~~dad-----~~~a~----------~~~~c~a~~~v~v~  423 (605)
                      .+||||.   .+|+++.+.++ +++++|+++|||||||+||++|||     ++.++          .|+.|++++|+|||
T Consensus       225 v~fTGS~---~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~  301 (513)
T cd07128         225 VAFTGSA---ATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVP  301 (513)
T ss_pred             EEEECCH---HHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEe
Confidence            4688986   99999998753 458999999999999999999999     88876          46669999999999


Q ss_pred             cccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc-------CCCCeeEeeE
Q psy1099         424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK-------GDKGYFIEPT  496 (605)
Q Consensus       424 ~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~-------~~~g~~~~Pt  496 (605)
                      ++++|+|+++|++++.++++|+|.++.+++||++++.++++++++++++++. +++++||...       ...|+|++||
T Consensus       302 ~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PT  380 (513)
T cd07128         302 EARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPT  380 (513)
T ss_pred             hHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCE
Confidence            9999999999999999999999999999999999999999999999999988 9999999652       1358999999


Q ss_pred             EeecCCCC--CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcc--cCcccC-------
Q psy1099         497 VFSNVTDD--FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN--AGSAVV-------  565 (605)
Q Consensus       497 i~~~~~~~--~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~--~G~~~~-------  565 (605)
                      |+.+++++  +.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++++  +|.+++       
T Consensus       381 vl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~  460 (513)
T cd07128         381 LLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAK  460 (513)
T ss_pred             EEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCcccc
Confidence            99988874  7999999999999999999999999999999999999999999999999999997  888433       


Q ss_pred             ---------CCCcccccCCCCCCChh-HHHHHHHhhhceEEEEcC
Q psy1099         566 ---------PQAPFGGFKESGIGREL-GKAALDEYTELKTVTESP  600 (605)
Q Consensus       566 ---------~~~PfGG~~~SG~G~~~-g~~~~~~~~~~k~v~~~~  600 (605)
                               +.+||||+|.||+|+++ |.+++++||+.|+|.-.|
T Consensus       461 ~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~~~~  505 (513)
T cd07128         461 ESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGSP  505 (513)
T ss_pred             ccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeeeCCH
Confidence                     24799999999999995 699999999999987543

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=2.4e-54  Score=464.31  Aligned_cols=235  Identities=29%  Similarity=0.377  Sum_probs=215.7

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcC---CCCHHHHH-----------hcccccccCeEEEecc
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA---DADVDMAY-----------YYCFVCAGSRTYVQED  425 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~---dad~~~a~-----------~~~~c~a~~~v~v~~~  425 (605)
                      .+|||++   .+|+.|.+.++. +++|+++|||||||+||++   |||++.|+           .|+.|++++|+|||++
T Consensus       188 v~fTGS~---~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~  263 (484)
T PLN02203        188 IFFTGSP---RVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEER  263 (484)
T ss_pred             EEEECCH---HHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHH
Confidence            3678886   999999888776 9999999999999999997   69999986           2444999999999999


Q ss_pred             cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCC
Q psy1099         426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       426 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~  505 (605)
                      ++|+|+++|.+++.++++|+|.+. +++||+++..++++++++++++.+. ++++.||.. +..|+|++|||+.+++++|
T Consensus       264 i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~~-~~~g~~i~PTvl~~v~~d~  340 (484)
T PLN02203        264 FAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSI-DEKKLFIEPTILLNPPLDS  340 (484)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCCc-CCCCCEEeeEEEecCCCCC
Confidence            999999999999999999999885 6899999999999999999999886 789999875 3469999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKES  576 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~S  576 (605)
                      ++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+         +.+||||+|.|
T Consensus       341 ~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~S  420 (484)
T PLN02203        341 DIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGES  420 (484)
T ss_pred             HHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcc
Confidence            999999999999999999999999999999999999999999999999999999998332         34799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEEcCC
Q psy1099         577 GIGRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      |+|+++|++++++||+.|+|+.++.
T Consensus       421 G~Gr~~g~~~l~~ft~~k~v~~~~~  445 (484)
T PLN02203        421 GFGRYHGKYSFDTFSHEKAVLRRSL  445 (484)
T ss_pred             cCCccccHHHHHHhcceeEEEEcCc
Confidence            9999999999999999999997754

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=1.5e-54  Score=468.63  Aligned_cols=233  Identities=42%  Similarity=0.678  Sum_probs=218.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       200 ~~V~ftGs~---~~g~~i~~~aa~-~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  275 (451)
T cd07150         200 RMVTFTGST---AVGREIAEKAGR-HLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVY  275 (451)
T ss_pred             CEEEEECcH---HHHHHHHHHHhh-cCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH
Confidence            344678886   899999888876 999999999999999999999999986          455599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++.+++||+++..+++++.+++++++++|+++++||..   .|+|++|||+.++++++++
T Consensus       276 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~  352 (451)
T cd07150         276 DEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRI  352 (451)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHH
Confidence            9999999999999999999999999999999999999999999999999999999864   4899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIG  579 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G  579 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+        +.+||||+|.||+|
T Consensus       353 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G  432 (451)
T cd07150         353 FREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFG  432 (451)
T ss_pred             HhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccC
Confidence            9999999999999999999999999999999999999999999999999999998322        45799999999999


Q ss_pred             ChhHHHHHHHhhhceEEE
Q psy1099         580 RELGKAALDEYTELKTVT  597 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~  597 (605)
                      +++|.+++++||+.|+|+
T Consensus       433 ~~~g~~~l~~~~~~k~v~  450 (451)
T cd07150         433 REGGEWSMEEFTELKWIT  450 (451)
T ss_pred             cCCcHHHHHHhheeeEEe
Confidence            999999999999999986

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.6e-54  Score=466.71  Aligned_cols=232  Identities=38%  Similarity=0.597  Sum_probs=217.1

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       192 ~V~fTGs~---~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~  267 (443)
T cd07152         192 MISFTGST---AVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVAD  267 (443)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHH
Confidence            34678886   999999887776 999999999999999999999999986          4555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|.+++.++++|+|.++.+++||+++..+++++.++++++.+.|+++++||..   .|+|++|||+.+++++|+++
T Consensus       268 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~  344 (443)
T cd07152         268 AYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAF  344 (443)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc---CCEEEcCEEEecCCCCChhh
Confidence            999999999999999999999999999999999999999999999999999999874   48999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCC-
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIG-  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G-  579 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++        +.+||||+|+||+| 
T Consensus       345 ~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~  424 (443)
T cd07152         345 DEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGS  424 (443)
T ss_pred             hccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCC
Confidence            999999999999999999999999999999999999999999999999999999433        35899999999999 


Q ss_pred             ChhHHHHHHHhhhceEEE
Q psy1099         580 RELGKAALDEYTELKTVT  597 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~  597 (605)
                      +.+|++++++||+.|+++
T Consensus       425 ~~~g~~~l~~~~~~k~~~  442 (443)
T cd07152         425 RFGGPANWEEFTQWQWVT  442 (443)
T ss_pred             ccCcHHHHHHhhceeEEe
Confidence            778999999999999986

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-54  Score=468.13  Aligned_cols=236  Identities=34%  Similarity=0.557  Sum_probs=218.8

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCC-CHHHHH----------hcccccccCeEEEecccH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADA-DVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~da-d~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ...|||++   .+|+.|.+.++.++++|+++|+|||||+||.+|+ |++.|+          .|+.|++++|+|||++++
T Consensus       239 ~v~fTGs~---~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~  315 (494)
T PRK09847        239 AIAFTGST---RTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA  315 (494)
T ss_pred             EEEEECCH---HHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH
Confidence            34678885   8999998887744899999999999999999997 999986          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++++++||++++.+++++.+++++++++| +++.||... ..++|++|||+.++++++++
T Consensus       316 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~  393 (494)
T PRK09847        316 DEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASL  393 (494)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChH
Confidence            9999999999999999999999999999999999999999999999999 999998763 35789999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.+.+       +.+||||+|.||+|+
T Consensus       394 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~  473 (494)
T PRK09847        394 SREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGR  473 (494)
T ss_pred             HhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCc
Confidence            9999999999999999999999999999999999999999999999999999999433       357999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEc
Q psy1099         581 ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~  599 (605)
                      ++|.+++++||+.|+|+.+
T Consensus       474 ~~g~~~l~~ft~~k~v~~~  492 (494)
T PRK09847        474 DKSLHALEKFTELKTIWIS  492 (494)
T ss_pred             cchHHHHHHhhceEEEEEe
Confidence            9999999999999999764

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=2.8e-54  Score=466.38  Aligned_cols=230  Identities=39%  Similarity=0.644  Sum_probs=214.9

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|.+.+   +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       205 ~V~fTGs~---~~g~~v~~~a---~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d  278 (453)
T cd07094         205 MLSFTGSA---AVGEALRANA---GGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYD  278 (453)
T ss_pred             EEEEECcH---HHHHHHHHHc---CCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHH
Confidence            34678885   8899997765   589999999999999999999999986          4566999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+|.++++++||+++..+++++.++++++++.|+++++||..   .|+|++|||+.+++++|+++
T Consensus       279 ~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~  355 (453)
T cd07094         279 EFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLS  355 (453)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhh
Confidence            999999999999999999999999999999999999999999999999999999864   58999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGR  580 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G~  580 (605)
                      +||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.+.+        +.+||||+|+||+|+
T Consensus       356 ~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~  435 (453)
T cd07094         356 TEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGR  435 (453)
T ss_pred             hCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCc
Confidence            999999999999999999999999999999999999999999999999999998322        457999999999999


Q ss_pred             hhHHHHHHHhhhceEEE
Q psy1099         581 ELGKAALDEYTELKTVT  597 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~  597 (605)
                      ++|++++++||+.|+|+
T Consensus       436 ~~g~~~~~~~~~~k~i~  452 (453)
T cd07094         436 EGVPYAMEEMTEEKTVV  452 (453)
T ss_pred             CChHHHHHHHhceeEEe
Confidence            99999999999999986

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=3.7e-54  Score=465.67  Aligned_cols=235  Identities=47%  Similarity=0.741  Sum_probs=219.0

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.+.+.++. +++|+++|+||+||+||++|||++.|+          .|+.|++++++|||+++++
T Consensus       201 ~V~ftGs~---~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~  276 (457)
T cd07114         201 KIAFTGGT---ETGRHIARAAAE-NLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYD  276 (457)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-cCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHH
Confidence            34678885   899999888776 899999999999999999999999986          4555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCCCC
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~~~  504 (605)
                      +|++.|++++.++++|+|.++++++||+++..+++++.+++++++++|+++++||....    ..|+|++|||+.+++++
T Consensus       277 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~  356 (457)
T cd07114         277 EFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTND  356 (457)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCC
Confidence            99999999999999999999999999999999999999999999999999999997643    35899999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG  577 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG  577 (605)
                      +++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|+||
T Consensus       357 ~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG  436 (457)
T cd07114         357 MRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSG  436 (457)
T ss_pred             ChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCc
Confidence            9999999999999999999999999999999999999999999999999999999998433       457999999999


Q ss_pred             CCChhHHHHHHHhhhceEEE
Q psy1099         578 IGRELGKAALDEYTELKTVT  597 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~  597 (605)
                      +|+++|.+++++||+.|+++
T Consensus       437 ~G~~~g~~~~~~f~~~k~~~  456 (457)
T cd07114         437 IGRENGIEAIREYTQTKSVW  456 (457)
T ss_pred             CCccchHHHHHHHhceeEEe
Confidence            99999999999999999986

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=5e-54  Score=458.57  Aligned_cols=231  Identities=30%  Similarity=0.420  Sum_probs=214.0

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----h-------cccccccCeEEEecccHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----Y-------YCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~-------~~~c~a~~~v~v~~~~~~  428 (605)
                      .+|||++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+    +       |+.|++++|+|||++++|
T Consensus       181 v~fTGs~---~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d  256 (432)
T cd07137         181 IFFTGSP---RVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAP  256 (432)
T ss_pred             EEEECCh---HHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHH
Confidence            3678886   999999888775 899999999999999999999999986    2       344999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|.+++.++++|+|. ..+++||++++.+++++.++++++.+ |+++++||... ..|+|++|||+.+++++|+++
T Consensus       257 ~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~  333 (432)
T cd07137         257 TLIDALKNTLEKFFGENPK-ESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-EKNLYIEPTILLDPPLDSSIM  333 (432)
T ss_pred             HHHHHHHHHHHHHhCCCCC-ccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-CCCCEEeeEEEecCCCcchhh
Confidence            9999999999999999994 58999999999999999999999998 89999998753 469999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIG  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~SG~G  579 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+         +.+||||+|.||+|
T Consensus       334 ~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G  413 (432)
T cd07137         334 TEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFG  413 (432)
T ss_pred             hcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCC
Confidence            999999999999999999999999999999999999999999999999999998332         45799999999999


Q ss_pred             ChhHHHHHHHhhhceEEE
Q psy1099         580 RELGKAALDEYTELKTVT  597 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~  597 (605)
                      +++|.+++++||+.|+|+
T Consensus       414 ~~~g~~~l~~f~~~k~v~  431 (432)
T cd07137         414 AYHGKFSFDAFSHKKAVL  431 (432)
T ss_pred             ccccHHHHHHhccCceee
Confidence            999999999999999986

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=5.4e-54  Score=466.02  Aligned_cols=237  Identities=25%  Similarity=0.335  Sum_probs=215.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....|||++   .+|+.|.+.++.+..+++++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       214 ~~V~fTGS~---~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~  290 (487)
T PRK09457        214 DGLLFTGSA---NTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQ  290 (487)
T ss_pred             CEEEEECCH---HHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEecccc
Confidence            334678886   9999999887764568899999999999999999999986          455599999999999998


Q ss_pred             -HHHHHHHHHHHhhcccCCCC-CCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCC
Q psy1099         428 -DTFVKKAVEKAAARKVGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       428 -~~~~~~l~~~~~~~~~g~~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~  505 (605)
                       |+|+++|.+++.++++|+|. ++.+++||+++..+++++.+++++++++|++++.||...+..|+|++|||+ +++++|
T Consensus       291 ~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~  369 (487)
T PRK09457        291 GDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVA  369 (487)
T ss_pred             HHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCC
Confidence             99999999999999999996 788999999999999999999999999999999988654456899999999 799999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESG  577 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG  577 (605)
                      ++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.++        .+.+||||+|+||
T Consensus       370 ~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG  449 (487)
T PRK09457        370 ELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASG  449 (487)
T ss_pred             hHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCccccc
Confidence            99999999999999999999999999999999999999999999999999999999842        2357999999999


Q ss_pred             CCChhHHHHHHHhhhceEEEEc
Q psy1099         578 IGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +|+++|..+ .+||+.|+++.+
T Consensus       450 ~G~~~g~~~-~~~~~~k~~~~~  470 (487)
T PRK09457        450 NHRPSAYYA-ADYCAYPMASLE  470 (487)
T ss_pred             CCCCCchhH-hhheeeeEEEEe
Confidence            999999555 559999999877

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=5.8e-54  Score=467.29  Aligned_cols=236  Identities=35%  Similarity=0.561  Sum_probs=217.4

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccc------cceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEE
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNL------KRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~------~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v  422 (605)
                      ...|||++   .+|+.+.+.++. ++      +|+++|+|||||+||++|||++.|+          .|+.|++++|+||
T Consensus       236 ~v~ftGs~---~~g~~v~~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V  311 (500)
T cd07083         236 GINFTGSL---ETGKKIYEAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLIL  311 (500)
T ss_pred             EEEEECcH---HHHHHHHHHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEE
Confidence            34678886   999999888776 65      9999999999999999999999986          4555999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCC
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVT  502 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~  502 (605)
                      |++++|+|+++|++++.++++|+|.++.+++||++++.++++++++++++.+.| ++++||...+..|+|++|||+.+++
T Consensus       312 ~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~  390 (500)
T cd07083         312 TQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVP  390 (500)
T ss_pred             cHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCC
Confidence            999999999999999999999999999999999999999999999999998876 9999997655568999999999999


Q ss_pred             CCCcccccceeeeeeeeEeeC--CHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCccc
Q psy1099         503 DDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFG  571 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~--~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfG  571 (605)
                      +++++++||+||||++|++|+  |++|||+++|.++|||+++|||+|.+.+.++++++++|.+.+         +.+|||
T Consensus       391 ~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfG  470 (500)
T cd07083         391 PKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFG  470 (500)
T ss_pred             CCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCC
Confidence            999999999999999999999  999999999999999999999999999999999999998332         357999


Q ss_pred             ccCCCCCC-ChhHHHHHHHhhhceEEEEc
Q psy1099         572 GFKESGIG-RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       572 G~~~SG~G-~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+|.||+| +.+|++++++||+.|+++..
T Consensus       471 G~k~SG~G~~~~g~~~l~~~~~~k~~~~~  499 (500)
T cd07083         471 GFKLSGTNAKTGGPHYLRRFLEMKAVAER  499 (500)
T ss_pred             ccccccCCCcccCHHHHHHhhheeEEEEc
Confidence            99999999 57889999999999999863

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=6e-54  Score=463.78  Aligned_cols=234  Identities=41%  Similarity=0.651  Sum_probs=218.9

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||+++++
T Consensus       199 ~V~fTGs~---~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~  274 (450)
T cd07092         199 MVSLTGSV---RTGKKVARAAAD-TLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYD  274 (450)
T ss_pred             EEEEECcH---HHHHHHHHHHhh-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHH
Confidence            34678885   899999888776 899999999999999999999999986          4556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+|.++++++||++++.++++++++++++. +|+++++||...+..|+|++|||+.+++++++++
T Consensus       275 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~  353 (450)
T cd07092         275 EFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIV  353 (450)
T ss_pred             HHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHH
Confidence            999999999999999999999999999999999999999999998 9999999997655579999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCCh
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRE  581 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~~  581 (605)
                      +||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+       +.+||||+|.||+|++
T Consensus       354 ~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~  433 (450)
T cd07092         354 QEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKD  433 (450)
T ss_pred             hCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCC
Confidence            999999999999999999999999999999999999999999999999999998433       4589999999999999


Q ss_pred             hHHHHHHHhhhceEEE
Q psy1099         582 LGKAALDEYTELKTVT  597 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~  597 (605)
                      +|++++++||+.|+|+
T Consensus       434 ~g~~~~~~~~~~k~~~  449 (450)
T cd07092         434 LSIYALEDYTRIKHVM  449 (450)
T ss_pred             ChHHHHHHHheeeEEe
Confidence            9999999999999985

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-54  Score=465.71  Aligned_cols=232  Identities=29%  Similarity=0.422  Sum_probs=212.0

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDT  429 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~  429 (605)
                      ..||++    .+|+++.+.+   .++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|+
T Consensus       241 V~ftGs----~~g~~v~~~a---~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~  313 (496)
T PLN00412        241 ISFTGG----DTGIAISKKA---GMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADA  313 (496)
T ss_pred             EEEeCh----HHHHHHHHHh---CCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHH
Confidence            356666    5778887655   379999999999999999999999986          35559999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccc
Q psy1099         430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR  509 (605)
Q Consensus       430 ~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~  509 (605)
                      |+++|++++.++++|+|.+ .+++||+++..+++++.++++++++.|++++.||..   .|+|++|||+.++++++++++
T Consensus       314 f~~~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~  389 (496)
T PLN00412        314 LVEKVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAW  389 (496)
T ss_pred             HHHHHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHh
Confidence            9999999999999999987 789999999999999999999999999999987743   699999999999999999999


Q ss_pred             cceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCCCh
Q psy1099         510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRE  581 (605)
Q Consensus       510 eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G~~  581 (605)
                      ||+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|.+.+        +.+||||+|.||+|++
T Consensus       390 eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~  469 (496)
T PLN00412        390 EEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQ  469 (496)
T ss_pred             CcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCC
Confidence            99999999999999999999999999999999999999999999999999998322        3479999999999999


Q ss_pred             hHHHHHHHhhhceEEEEcCCC
Q psy1099         582 LGKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~~~~~~  602 (605)
                      +|++++++||+.|+++.+..+
T Consensus       470 ~g~~~~~~ft~~k~i~~~~~~  490 (496)
T PLN00412        470 GITNSINMMTKVKSTVINLPK  490 (496)
T ss_pred             ChHHHHHHhcceEEEEEecCC
Confidence            999999999999999876544

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=5.8e-54  Score=463.82  Aligned_cols=231  Identities=35%  Similarity=0.600  Sum_probs=214.5

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.|.+.++   .+|+++|+|||||+||++|||++.|+          .|+.|++++++|||++++|
T Consensus       204 ~v~fTGs~---~~g~~v~~~a~---~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d  277 (452)
T cd07147         204 LLSFTGSP---AVGWDLKARAG---KKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYD  277 (452)
T ss_pred             EEEEECCH---HHHHHHHHHhC---cCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHH
Confidence            34678885   89999987654   37999999999999999999999986          4556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|++++.||..   .|+|++|||+.+++++++++
T Consensus       278 ~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~  354 (452)
T cd07147         278 EFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVN  354 (452)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHH
Confidence            999999999999999999999999999999999999999999999999999999875   48999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGR  580 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G~  580 (605)
                      +||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+        +.+||||+|.||+|+
T Consensus       355 ~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~  434 (452)
T cd07147         355 CEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGR  434 (452)
T ss_pred             hCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCC
Confidence            999999999999999999999999999999999999999999999999999998332        347999999999999


Q ss_pred             hhHHHHHHHhhhceEEEE
Q psy1099         581 ELGKAALDEYTELKTVTE  598 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~  598 (605)
                      ++|++++++||+.|+|++
T Consensus       435 ~~g~~~~~~~~~~k~i~~  452 (452)
T cd07147         435 EGVRYAIEEMTEPRLLVI  452 (452)
T ss_pred             CChHHHHHHhcceeEEeC
Confidence            999999999999999863

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=9.9e-54  Score=457.44  Aligned_cols=233  Identities=27%  Similarity=0.376  Sum_probs=215.0

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.+++.++. ++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       180 ~V~ftGs~---~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~  255 (434)
T cd07133         180 HLLFTGST---AVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLE  255 (434)
T ss_pred             EEEEeCch---HHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHH
Confidence            34678886   999999888776 999999999999999999999999986          3555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCCCc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+++|.+++.++++|+  +.++++||++++.+++++.+++++++++|++++.||...+  ..|+|++|||+.+++++++
T Consensus       256 ~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~  333 (434)
T cd07133         256 EFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMR  333 (434)
T ss_pred             HHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCc
Confidence            99999999999999886  4678999999999999999999999999999999986543  3689999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESG  577 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~SG  577 (605)
                      +++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+         +.+||||+|.||
T Consensus       334 i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG  413 (434)
T cd07133         334 VMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASG  413 (434)
T ss_pred             ccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999998332         457999999999


Q ss_pred             CCChhHHHHHHHhhhceEEE
Q psy1099         578 IGRELGKAALDEYTELKTVT  597 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~  597 (605)
                      +|+++|.+++++||+.|+|+
T Consensus       414 ~G~~~g~~~~~~ft~~k~v~  433 (434)
T cd07133         414 MGAYHGKEGFLTFSHAKPVF  433 (434)
T ss_pred             CCCcCCHHHHHHhcccceec
Confidence            99999999999999999985

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-54  Score=467.59  Aligned_cols=235  Identities=38%  Similarity=0.598  Sum_probs=216.0

Q ss_pred             eeEEEecCCccccHHHHHHHHHh-----ccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEe
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAA-----SNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQ  423 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~-----~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~  423 (605)
                      ..+||+++   .+|+.+++.++.     .++||+++|||||||+||++|||++.|+          .|+.|++++|+|||
T Consensus       253 ~V~fTGs~---~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~  329 (514)
T PRK03137        253 FITFTGSR---EVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVH  329 (514)
T ss_pred             EEEEECCc---HHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEe
Confidence            34678886   899999887763     1689999999999999999999999986          35559999999999


Q ss_pred             cccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCC
Q psy1099         424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTD  503 (605)
Q Consensus       424 ~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~  503 (605)
                      ++++|+|+++|++++.++++|+|.++. ++||++++.+++++.++++++.+. +++++||...+..|+|++|||+.++++
T Consensus       330 ~~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~  407 (514)
T PRK03137        330 EDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDP  407 (514)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCC
Confidence            999999999999999999999999988 999999999999999999999887 699999976545799999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFK  574 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~  574 (605)
                      ++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+++         +.+||||+|
T Consensus       408 ~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k  487 (514)
T PRK03137        408 KARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFN  487 (514)
T ss_pred             CCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999998433         347999999


Q ss_pred             CCCCC-ChhHHHHHHHhhhceEEEE
Q psy1099         575 ESGIG-RELGKAALDEYTELKTVTE  598 (605)
Q Consensus       575 ~SG~G-~~~g~~~~~~~~~~k~v~~  598 (605)
                      .||+| +.+|.+++++||+.|+|+.
T Consensus       488 ~SG~G~~~gg~~~l~~ft~~k~v~~  512 (514)
T PRK03137        488 MSGTDSKAGGPDYLLLFLQAKTVSE  512 (514)
T ss_pred             cccCCcccCCHHHHHHhceEEEEEE
Confidence            99999 6889999999999999975

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=3.4e-54  Score=460.67  Aligned_cols=233  Identities=28%  Similarity=0.367  Sum_probs=213.0

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc-cH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED-IY  427 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~-~~  427 (605)
                      ...||+++   .+|++|.+.++.+.++++++|+|||||+||++|||++.|+          .|+.|++++|+|||++ ++
T Consensus       178 ~v~ftGs~---~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~  254 (431)
T cd07095         178 GLLFTGSA---ATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVG  254 (431)
T ss_pred             EEEEECcH---HHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchH
Confidence            34678885   8999998887764579999999999999999999999986          4556999999999999 99


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++.+++||+++..+++++.+++++++++|++++.||...+..|+|++|||+ ++++++.+
T Consensus       255 d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i  333 (431)
T cd07095         255 DAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADV  333 (431)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCChH
Confidence            99999999999999999999999999999999999999999999999999999999765557999999999 69999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccCC--------CCcccccCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP--------QAPFGGFKESGIG  579 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~~--------~~PfGG~~~SG~G  579 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++|        .+||||+|.||+|
T Consensus       334 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G  413 (431)
T cd07095         334 PDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNH  413 (431)
T ss_pred             HhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999994332        3799999999999


Q ss_pred             ChhHHHHHHHhhhceEE
Q psy1099         580 RELGKAALDEYTELKTV  596 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v  596 (605)
                      +++|.++++.|+ .|++
T Consensus       414 ~~~g~~~~~~~~-~~~~  429 (431)
T cd07095         414 RPSAYYAADYCA-YPVA  429 (431)
T ss_pred             CCChHHHHHHHh-hhhc
Confidence            999999999554 4443

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=8.3e-54  Score=463.92  Aligned_cols=239  Identities=36%  Similarity=0.577  Sum_probs=221.2

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....||+++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       204 ~~V~ftGs~---~~g~~v~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  279 (465)
T cd07098         204 DHITFIGSP---PVGKKVMAAAAE-SLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIY  279 (465)
T ss_pred             CEEEEECCH---HHHHHHHHHHHh-cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHH
Confidence            344678886   899999888776 899999999999999999999999986          355699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~~  503 (605)
                      |+|+++|++++.++++|+|.++.+++||++++.+++++.+++++++.+|+++++||....    ..|+|++|||+.++++
T Consensus       280 d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~  359 (465)
T cd07098         280 DKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTP  359 (465)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCC
Confidence            999999999999999999999999999999999999999999999999999999986532    2589999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFK  574 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~  574 (605)
                      ++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+         +.+||||+|
T Consensus       360 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k  439 (465)
T cd07098         360 DMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVK  439 (465)
T ss_pred             CCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccc
Confidence            99999999999999999999999999999999999999999999999999999999998332         357999999


Q ss_pred             CCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099         575 ESGIGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       575 ~SG~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +||+|+++|++++++||+.|+|+.++
T Consensus       440 ~SG~G~~~g~~~~~~~~~~k~~~~~~  465 (465)
T cd07098         440 GSGFGRFAGEEGLRGLCNPKSVTEDR  465 (465)
T ss_pred             cccCCccChHHHHHHhheeEEEEEeC
Confidence            99999999999999999999998753

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=8.5e-54  Score=456.97  Aligned_cols=230  Identities=30%  Similarity=0.481  Sum_probs=212.8

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.|++.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       179 ~V~fTGS~---~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d  254 (449)
T cd07136         179 YIFFTGSV---RVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKE  254 (449)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHH
Confidence            34678886   999999888876 899999999999999999999999986          4556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.+++.|+|.+ .+++||++++.++++++++++++     ++++||... ..|+|++|||+.++++++.++
T Consensus       255 ~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~g~~~~Ptvl~~v~~~~~~~  327 (449)
T cd07136         255 KFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RETLYIEPTILDNVTWDDPVM  327 (449)
T ss_pred             HHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CCCCEEeeEEEecCCCcChHH
Confidence            99999999999999999987 89999999999999999998764     899999763 368999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIG  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~SG~G  579 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++         +.+||||+|.||+|
T Consensus       328 ~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G  407 (449)
T cd07136         328 QEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMG  407 (449)
T ss_pred             hccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCcccCC
Confidence            999999999999999999999999999999999999999999999999999998322         45799999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEc
Q psy1099         580 RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +++|.+++++||+.|+|+++
T Consensus       408 ~~~g~~~l~~~t~~k~v~~~  427 (449)
T cd07136         408 SYHGKYSFDTFSHKKSILKK  427 (449)
T ss_pred             cccCHHHHHHhccceEEEEc
Confidence            99999999999999999977

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.7e-54  Score=481.33  Aligned_cols=238  Identities=26%  Similarity=0.321  Sum_probs=215.6

Q ss_pred             eeEEEecCCccccHHHHHHHH-HhccccceeeecCCCCcEEEcCCCC-----HHHHH----------hcccccccCeEEE
Q psy1099         359 LKTVTESPLRSYTSHSIMAAA-AASNLKRVSLELGGKSPLVICADAD-----VDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~-a~~~~~~~~lElgG~~p~iV~~dad-----~~~a~----------~~~~c~a~~~v~v  422 (605)
                      ..+||||.   .+|++|.+.+ ++++++|+++|||||||+||++|||     ++.|+          .|+.|++++|+||
T Consensus       228 ~v~FTGS~---~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V  304 (675)
T PRK11563        228 VVTFTGSA---ATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIV  304 (675)
T ss_pred             EEEEECcH---HHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEe
Confidence            33688885   9999998853 3458999999999999999999995     88876          4666999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc-------CCCCeeEee
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK-------GDKGYFIEP  495 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~-------~~~g~~~~P  495 (605)
                      |++++|+|+++|++++.++++|+|.++.+++||+++..+++++.+++++++++ +++++||...       ...|+|++|
T Consensus       305 ~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~P  383 (675)
T PRK11563        305 PRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPP  383 (675)
T ss_pred             eHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECC
Confidence            99999999999999999999999999999999999999999999999999998 9999999532       136999999


Q ss_pred             EEeecCCC--CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcc--cCcccCC-----
Q psy1099         496 TVFSNVTD--DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN--AGSAVVP-----  566 (605)
Q Consensus       496 ti~~~~~~--~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~--~G~~~~~-----  566 (605)
                      ||+.++++  ++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.+++++++  +|.+++|     
T Consensus       384 Tvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~  463 (675)
T PRK11563        384 TLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESA  463 (675)
T ss_pred             EEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCcccc
Confidence            99999998  57899999999999999999999999999999999999999999999999999997  8884433     


Q ss_pred             -----------CCcccccCCCCCCChh-HHHHHHHhhhceEEEEcC
Q psy1099         567 -----------QAPFGGFKESGIGREL-GKAALDEYTELKTVTESP  600 (605)
Q Consensus       567 -----------~~PfGG~~~SG~G~~~-g~~~~~~~~~~k~v~~~~  600 (605)
                                 .+||||+|.||+|++. |.+++++|++.|+|...|
T Consensus       464 ~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~~~  509 (675)
T PRK11563        464 KESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGSP  509 (675)
T ss_pred             ccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeecCH
Confidence                       4699999999999995 699999999999998654

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=7.4e-54  Score=457.79  Aligned_cols=230  Identities=32%  Similarity=0.454  Sum_probs=213.5

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+++.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       187 ~v~ftGs~---~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d  262 (436)
T cd07135         187 KIFYTGSG---RVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYD  262 (436)
T ss_pred             EEEEECCc---HHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHH
Confidence            34678886   999999887775 899999999999999999999999986          3455999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+| ++.+++||+++..+++++.++++++   |++++.||... ..|+|++|||+.+++++++++
T Consensus       263 ~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~  337 (436)
T cd07135         263 EFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEMD-EATRFIPPTIVSDVSWDDSLM  337 (436)
T ss_pred             HHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCcC-CCCCEEccEEEecCCCccHHH
Confidence            999999999999999999 8999999999999999999999887   88999999764 378999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIG  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~SG~G  579 (605)
                      +||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+         +.+||||+|.||+|
T Consensus       338 ~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G  417 (436)
T cd07135         338 SEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYG  417 (436)
T ss_pred             hccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcccCC
Confidence            999999999999999999999999999999999999999999999999999998332         45799999999999


Q ss_pred             ChhHHHHHHHhhhceEEE
Q psy1099         580 RELGKAALDEYTELKTVT  597 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~  597 (605)
                      +++|.+++++||+.|+|.
T Consensus       418 ~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         418 AYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             ccccHhHHHHhccccccc
Confidence            999999999999999875

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=2.1e-53  Score=456.27  Aligned_cols=231  Identities=37%  Similarity=0.524  Sum_probs=214.1

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...||+++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++++|||++++
T Consensus       182 ~~v~ftGs~---~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~  257 (432)
T cd07105         182 RKVNFTGST---RVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIA  257 (432)
T ss_pred             CEEEEECCH---HHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHH
Confidence            344678886   999999988776 999999999999999999999999986          355599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++|.+++.++++|     .+++||++++.+++++.+++++++++|++++.||.... ..|+|++|||+.+++++++
T Consensus       258 ~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~  332 (432)
T cd07105         258 DEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMD  332 (432)
T ss_pred             HHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCH
Confidence            99999999999999988     68999999999999999999999999999999987643 3689999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGI  578 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~  578 (605)
                      +++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.++        .+.+||||+|.||+
T Consensus       333 ~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~  412 (432)
T cd07105         333 IYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGY  412 (432)
T ss_pred             HHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccc
Confidence            9999999999999999999999999999999999999999999999999999999832        24689999999999


Q ss_pred             CChhHHHHHHHhhhceEEE
Q psy1099         579 GRELGKAALDEYTELKTVT  597 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~  597 (605)
                      |+++|++++++||+.|+|+
T Consensus       413 G~~~g~~~l~~~~~~k~v~  431 (432)
T cd07105         413 GRFNGKWGIDEFTETKWIT  431 (432)
T ss_pred             cccChHHHHHHhhceEEEe
Confidence            9999999999999999986

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=1.3e-53  Score=462.65  Aligned_cols=237  Identities=30%  Similarity=0.399  Sum_probs=218.7

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....||+++   .+|+.+.+.++. ++||+++|+||+||+||++|||++.|+          .|+.|++++|+|||+++ 
T Consensus       216 ~~V~ftGS~---~~g~~v~~~a~~-~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-  290 (477)
T TIGR01722       216 KAVSFVGST---PIGRYIHTTGSA-HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-  290 (477)
T ss_pred             CEEEEECCH---HHHHHHHHHHHh-cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-
Confidence            344678886   999999887765 999999999999999999999999986          35569999999999999 


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc--C--CCCeeEeeEEeecCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK--G--DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~--~--~~g~~~~Pti~~~~~~  503 (605)
                      ++|+++|++++.++++|+|.++.+++||+++..+++++.+++++++++|+++++||...  +  ..|+|++|||+.++++
T Consensus       291 ~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~  370 (477)
T TIGR01722       291 DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPP  370 (477)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCC
Confidence            99999999999999999999999999999999999999999999999999999998752  1  3589999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKE  575 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~  575 (605)
                      ++.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++        +.+||||+|.
T Consensus       371 ~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~  450 (477)
T TIGR01722       371 TMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKD  450 (477)
T ss_pred             CChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCcccc
Confidence            99999999999999999999999999999999999999999999999999999999998432        3579999999


Q ss_pred             CCCC--ChhHHHHHHHhhhceEEEEc
Q psy1099         576 SGIG--RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       576 SG~G--~~~g~~~~~~~~~~k~v~~~  599 (605)
                      ||+|  +++|++++++||+.|+++++
T Consensus       451 SG~G~~~~~g~~~l~~~~~~k~i~~~  476 (477)
T TIGR01722       451 SFFGDHHIYGKQGTHFYTRGKTVTTR  476 (477)
T ss_pred             ccCCCCccChHHHHHHhcCeeEEEEe
Confidence            9999  57899999999999999875

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=2.3e-53  Score=459.50  Aligned_cols=235  Identities=45%  Similarity=0.705  Sum_probs=217.2

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hc-------ccccccCeEEEecccH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YY-------CFVCAGSRTYVQEDIY  427 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~-------~~c~a~~~v~v~~~~~  427 (605)
                      ...|||++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+    ++       +.|++++|+|||++++
T Consensus       198 ~v~ftGs~---~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~  273 (457)
T cd07108         198 KVTFTGST---EVGKIIYRAAAD-RLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIY  273 (457)
T ss_pred             EEEEECcH---HHHHHHHHHHhc-cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHH
Confidence            34678886   999999888776 899999999999999999999999986    33       3399999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH-cCCeEEeCCcccC----CCCeeEeeEEeecCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVE-QGGKLEAGGKRKG----DKGYFIEPTVFSNVT  502 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~g~~v~~gg~~~~----~~g~~~~Pti~~~~~  502 (605)
                      |+|+++|++++.++++|+|.++++++||++++.++++++++++++++ +|+++++||....    ..|+|++|||+.+++
T Consensus       274 ~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~  353 (457)
T cd07108         274 DAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVD  353 (457)
T ss_pred             HHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCC
Confidence            99999999999999999999999999999999999999999999998 9999999997532    368999999999999


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCC
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKE  575 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~  575 (605)
                      +++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+       +.+||||+|.
T Consensus       354 ~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~  433 (457)
T cd07108         354 NEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQ  433 (457)
T ss_pred             CCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccc
Confidence            999999999999999999999999999999999999999999999999999999999998433       4589999999


Q ss_pred             CCCCChhHHHH-HHHhhhceEEE
Q psy1099         576 SGIGRELGKAA-LDEYTELKTVT  597 (605)
Q Consensus       576 SG~G~~~g~~~-~~~~~~~k~v~  597 (605)
                      ||+|+++|.++ +++||+.|+|+
T Consensus       434 SG~G~~~g~~~~~~~f~~~k~i~  456 (457)
T cd07108         434 SGLGREASLEGMLEHFTQKKTVN  456 (457)
T ss_pred             CcCCCCccchhHHHHhhceEEEe
Confidence            99999999866 79999999985

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=2.6e-53  Score=456.79  Aligned_cols=231  Identities=38%  Similarity=0.601  Sum_probs=213.6

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....||+++   .+|+.+.+.++   ++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       201 ~~V~fTGs~---~~g~~i~~~a~---~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  274 (451)
T cd07146         201 DLVTFTGGV---AVGKAIAATAG---YKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVA  274 (451)
T ss_pred             CEEEEECCH---HHHHHHHHHhc---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHH
Confidence            334678885   88999876553   68999999999999999999999986          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|++++.||..   .|+|++|||+.+++++|++
T Consensus       275 d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~  351 (451)
T cd07146         275 DEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAEL  351 (451)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHH
Confidence            9999999999999999999999999999999999999999999999999999999864   4899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCC-
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGI-  578 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~-  578 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+        +.+||||+|.||+ 
T Consensus       352 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~  431 (451)
T cd07146         352 VTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLG  431 (451)
T ss_pred             HhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCC
Confidence            9999999999999999999999999999999999999999999999999999998432        3479999999995 


Q ss_pred             CChhHHHHHHHhhhceEEE
Q psy1099         579 GRELGKAALDEYTELKTVT  597 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~  597 (605)
                      |+++|++++++||+.|+++
T Consensus       432 g~~~g~~~~~~f~~~k~~~  450 (451)
T cd07146         432 GKEGVREAMKEMTNVKTYS  450 (451)
T ss_pred             cccChHHHHHHHhceeEEe
Confidence            8999999999999999985

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=4.3e-53  Score=459.09  Aligned_cols=238  Identities=26%  Similarity=0.369  Sum_probs=215.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...|||++   .+|++|++.++.+..+++++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       212 d~V~fTGS~---~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~  288 (484)
T TIGR03240       212 DGLLFTGSS---NTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQ  288 (484)
T ss_pred             CEEEEECCH---HHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecccc
Confidence            344678886   9999999887763478899999999999999999999986          455699999999999985


Q ss_pred             -HHHHHHHHHHHhhcccCCC-CCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCC
Q psy1099         428 -DTFVKKAVEKAAARKVGDP-FDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       428 -~~~~~~l~~~~~~~~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~  505 (605)
                       |+|+++|.+++.++++|+| .++++++||+++..+++++.++++++++.|+++++||...+..++|++|||+ ++++++
T Consensus       289 ~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~  367 (484)
T TIGR03240       289 GDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVA  367 (484)
T ss_pred             HHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCC
Confidence             9999999999999999997 5778899999999999999999999999999999988654456899999999 699999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESG  577 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG  577 (605)
                      ++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+        +.+||||+|.||
T Consensus       368 ~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG  447 (484)
T TIGR03240       368 ELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASG  447 (484)
T ss_pred             HHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCccccc
Confidence            999999999999999999999999999999999999999999999999999999999422        347999999999


Q ss_pred             CCChhHHHHHHHhhhceEEEEcC
Q psy1099         578 IGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +|+++|.++++ ||+.|+++.+.
T Consensus       448 ~g~~~g~~~~~-~~~~~~~~~~~  469 (484)
T TIGR03240       448 NHRPSAYYAAD-YCAYPVASLEA  469 (484)
T ss_pred             CCCCCchHHHh-heeeeEEEEec
Confidence            99999966655 99999999873

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=3.5e-53  Score=458.23  Aligned_cols=235  Identities=47%  Similarity=0.710  Sum_probs=219.1

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++++|||++++|
T Consensus       199 ~V~ftGs~---~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~  274 (451)
T cd07103         199 KISFTGST---AVGKLLMAQAAD-TVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYD  274 (451)
T ss_pred             EEEEECCH---HHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHH
Confidence            34677875   889999888776 999999999999999999999999986          4556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|++.|++++.++++|+|.++++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++++++
T Consensus       275 ~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~  354 (451)
T cd07103         275 EFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIM  354 (451)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHH
Confidence            99999999999999999999999999999999999999999999999999999997654578999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCCh
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRE  581 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~~  581 (605)
                      ++|+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|.||+|++
T Consensus       355 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~  434 (451)
T cd07103         355 NEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGRE  434 (451)
T ss_pred             hCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCcc
Confidence            999999999999999999999999999999999999999999999999999999443       3469999999999999


Q ss_pred             hHHHHHHHhhhceEEE
Q psy1099         582 LGKAALDEYTELKTVT  597 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~  597 (605)
                      +|++++++||+.|+++
T Consensus       435 ~g~~~~~~~~~~k~v~  450 (451)
T cd07103         435 GGKEGLEEYLETKYVS  450 (451)
T ss_pred             chHHHHHHHhceeEEe
Confidence            9999999999999985

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=4.1e-53  Score=455.32  Aligned_cols=232  Identities=41%  Similarity=0.669  Sum_probs=217.2

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++++|||++++|
T Consensus       181 ~V~ftGs~---~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~  256 (431)
T cd07104         181 MISFTGST---AVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYD  256 (431)
T ss_pred             EEEEECCH---HHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHH
Confidence            34678886   899999888776 999999999999999999999999986          4555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.++++|+|.++.+++||++++.+++++.+++++++++|+++++||..   .|+|++|||+.+++++++++
T Consensus       257 ~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~  333 (431)
T cd07104         257 EFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIF  333 (431)
T ss_pred             HHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCceECCEEeecCCCCChhh
Confidence            999999999999999999999999999999999999999999999999999999864   58999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGR  580 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G~  580 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.+.+        +.+||||+|.||+|+
T Consensus       334 ~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~  413 (431)
T cd07104         334 REEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGR  413 (431)
T ss_pred             hCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCcccccCCc
Confidence            999999999999999999999999999999999999999999999999999998322        457999999999999


Q ss_pred             hhHHHHHHHhhhceEEE
Q psy1099         581 ELGKAALDEYTELKTVT  597 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~  597 (605)
                      ++|++++++||+.|+++
T Consensus       414 ~~g~~~l~~~~~~k~~~  430 (431)
T cd07104         414 FGGPASLEEFTEWQWIT  430 (431)
T ss_pred             cchHHHHHHhhceeEEe
Confidence            99999999999999985

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=1e-53  Score=462.94  Aligned_cols=235  Identities=43%  Similarity=0.708  Sum_probs=216.2

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...|||+.   .+|+++.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++++|||++++
T Consensus       207 ~~v~ftGs~---~~g~~i~~~a~~-~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~  282 (462)
T PF00171_consen  207 DLVSFTGST---ATGRAIAKAAAK-NLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIY  282 (462)
T ss_dssp             EEEEEESEH---HHHHHHHHHHHT-TTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHH
T ss_pred             ceeeecchh---hhhhhhhhhccc-ccccccccccccceeeEecccccccccccccchhccccccccccccccccccccc
Confidence            344678885   899999988775 899999999999999999999999996          456699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCC---cccCCCCeeEeeEEeecCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG---KRKGDKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg---~~~~~~g~~~~Pti~~~~~~~  504 (605)
                      |+|+++|+++++++++|+|.++.+++||+++..+.+++.+++++++.+|+++++||   ......|+|++|||+.+++++
T Consensus       283 ~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~  362 (462)
T PF00171_consen  283 DEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPD  362 (462)
T ss_dssp             HHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTT
T ss_pred             chhhhhhhhccccccccCCccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999998   344568999999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CC-CcccccCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQ-APFGGFKES  576 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~-~PfGG~~~S  576 (605)
                      |++++||+||||++|++|+|++||++++|+++|||+++|||+|.+.++++++++++|.+.+       .. +||||+|.|
T Consensus       363 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~S  442 (462)
T PF00171_consen  363 MPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQS  442 (462)
T ss_dssp             SHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGG
T ss_pred             ccccccccccccceecccccchhhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999432       22 599999999


Q ss_pred             CCCChhHHHHHHHhhhceEE
Q psy1099         577 GIGRELGKAALDEYTELKTV  596 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v  596 (605)
                      |+|+++|.+++++||+.|+|
T Consensus       443 G~G~~~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  443 GIGREGGPEGLDEFTQIKTV  462 (462)
T ss_dssp             EESEBSHHHHHHGTEEEEEE
T ss_pred             cCCcchHHHHHHHhCCccCC
Confidence            99999999999999999987

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-53  Score=458.77  Aligned_cols=237  Identities=22%  Similarity=0.286  Sum_probs=210.6

Q ss_pred             eEEEecCCccccHHHHHHHHH-hccccceeeecCCCCcEEEcCCCCH-----HHHH----------hcccccccCeEEEe
Q psy1099         360 KTVTESPLRSYTSHSIMAAAA-ASNLKRVSLELGGKSPLVICADADV-----DMAY----------YYCFVCAGSRTYVQ  423 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a-~~~~~~~~lElgG~~p~iV~~dad~-----~~a~----------~~~~c~a~~~v~v~  423 (605)
                      .+||||.   .+|+++.+.++ +++++|+++|||||||+||++|||+     +.++          .|+.|++++|+|||
T Consensus       229 v~fTGS~---~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~  305 (521)
T PRK11903        229 VSFTGSA---ETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVP  305 (521)
T ss_pred             EEEECCH---HHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEe
Confidence            3678885   99999988643 4589999999999999999999995     6665          46669999999999


Q ss_pred             cccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc------CCCCeeEeeEE
Q psy1099         424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK------GDKGYFIEPTV  497 (605)
Q Consensus       424 ~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~------~~~g~~~~Pti  497 (605)
                      ++++|+|+++|++++.++++|+|.++.+++||++++.+++++.++++.. .+|+++++||...      ...|+|++|||
T Consensus       306 ~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTv  384 (521)
T PRK11903        306 EALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTL  384 (521)
T ss_pred             hhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEE
Confidence            9999999999999999999999999999999999999999999999864 5799999999642      13589999999


Q ss_pred             eecCCC--CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHc--ccCcccCC-------
Q psy1099         498 FSNVTD--DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI--NAGSAVVP-------  566 (605)
Q Consensus       498 ~~~~~~--~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~--~~G~~~~~-------  566 (605)
                      +.++++  ++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++  ++|.+++|       
T Consensus       385 l~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~  464 (521)
T PRK11903        385 LGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAAL  464 (521)
T ss_pred             EeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccc
Confidence            987654  4688999999999999999999999999999999999999999999999999999  89984433       


Q ss_pred             ---------CCcccccCCCCCCChhH-HHHHHHhhhceEEEEcC
Q psy1099         567 ---------QAPFGGFKESGIGRELG-KAALDEYTELKTVTESP  600 (605)
Q Consensus       567 ---------~~PfGG~~~SG~G~~~g-~~~~~~~~~~k~v~~~~  600 (605)
                               .+||||+|+||+|+++| .+++++||++|+|...+
T Consensus       465 ~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~~~  508 (521)
T PRK11903        465 HTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQASP  508 (521)
T ss_pred             cccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceeeCCH
Confidence                     46999999999999955 89999999988876544

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=7.7e-53  Score=455.77  Aligned_cols=235  Identities=48%  Similarity=0.730  Sum_probs=218.7

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.+.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++++|||++++|
T Consensus       199 ~V~ftGs~---~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d  274 (455)
T cd07093         199 LISFTGET---ATGRTIMRAAAP-NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYD  274 (455)
T ss_pred             EEEEECCH---HHHHHHHHHHhh-cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHH
Confidence            33578885   899999888875 899999999999999999999999986          3556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCCCC
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~~~  504 (605)
                      +|+++|++++.++++|+|.++++++||+++..+++++.++++++++.|+++++||....    ..|+|++|||+.+++++
T Consensus       275 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~  354 (455)
T cd07093         275 EFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDND  354 (455)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCC
Confidence            99999999999999999999999999999999999999999999999999999997543    35899999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG  577 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG  577 (605)
                      +++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.+.+       +.+||||+|.||
T Consensus       355 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG  434 (455)
T cd07093         355 SRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASG  434 (455)
T ss_pred             ChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCc
Confidence            9999999999999999999999999999999999999999999999999999999999443       346999999999


Q ss_pred             CCChhHHHHHHHhhhceEEE
Q psy1099         578 IGRELGKAALDEYTELKTVT  597 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~  597 (605)
                      +|+++|++++++||+.|+++
T Consensus       435 ~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07093         435 IGREGGDYSLEFYTELKNVC  454 (455)
T ss_pred             CCCCchHHHHHHHhceeEEe
Confidence            99999999999999999986

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=1.2e-52  Score=448.92  Aligned_cols=234  Identities=34%  Similarity=0.470  Sum_probs=216.8

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||++.   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++++|||++++|
T Consensus       179 ~v~ftGs~---~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d  254 (433)
T cd07134         179 HIFFTGSP---AVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKD  254 (433)
T ss_pred             EEEEECCh---HHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHHHH
Confidence            33678885   899999988775 899999999999999999999999986          4555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCC-CCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         429 TFVKKAVEKAAARKVGDP-FDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      +|+++|++++.+++.|+| .+..+++||++++.+++++.+++++++++|+++++||... ..|+|++|||+.++++++++
T Consensus       255 ~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~~g~~~~Ptvl~~~~~~~~~  333 (433)
T cd07134         255 AFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-AAQRYIAPTVLTNVTPDMKI  333 (433)
T ss_pred             HHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-CCCCEEeeEEEeCCCCccHH
Confidence            999999999999988887 7889999999999999999999999999999999999763 45899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFKESGI  578 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~~SG~  578 (605)
                      ++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.++         .+.+||||+|+||+
T Consensus       334 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~  413 (433)
T cd07134         334 MQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGI  413 (433)
T ss_pred             HhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccC
Confidence            999999999999999999999999999999999999999999999999999999832         24579999999999


Q ss_pred             CChhHHHHHHHhhhceEEE
Q psy1099         579 GRELGKAALDEYTELKTVT  597 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~  597 (605)
                      |+++|++++++||+.|+|.
T Consensus       414 G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         414 GSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             CCcCcHHHHHHhcccceee
Confidence            9999999999999999985

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=1.5e-52  Score=457.69  Aligned_cols=238  Identities=29%  Similarity=0.373  Sum_probs=214.7

Q ss_pred             ceeEEEecCCccccHHHHHHHHHh--ccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAA--SNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED  425 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~--~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~  425 (605)
                      ....||+++   .+|+.+.+.++.  +.++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++
T Consensus       248 d~V~ftGs~---~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~  324 (518)
T cd07125         248 DGVIFTGST---ETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEE  324 (518)
T ss_pred             CEEEEECCH---HHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcch
Confidence            344678886   899999887764  1389999999999999999999999986          3555999999999999


Q ss_pred             cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCC
Q psy1099         426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       426 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~  505 (605)
                      ++|+|+++|++++.++++|+|.++++++||++++.++++++++++++.. +++++.||......|+|++|||+.++  +|
T Consensus       325 i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~  401 (518)
T cd07125         325 IAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GI  401 (518)
T ss_pred             hHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CC
Confidence            9999999999999999999999999999999999999999999999987 57899988753336999999999887  89


Q ss_pred             cccccceeeeeeeeEeeC--CHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccC
Q psy1099         506 KIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFK  574 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~--~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~  574 (605)
                      ++++||+||||++|++|+  |++|||+++|.++|||++||||+|.+.++++++++++|.+.+         +.+||||+|
T Consensus       402 ~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~  481 (518)
T cd07125         402 FDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWG  481 (518)
T ss_pred             hHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcc
Confidence            999999999999999999  999999999999999999999999999999999999998332         357999999


Q ss_pred             CCCCCC-hhHHHHHHHhhhceEEEEcCC
Q psy1099         575 ESGIGR-ELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       575 ~SG~G~-~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      .||+|+ .+|++++++||+.|+|+.+..
T Consensus       482 ~SG~G~~~gg~~~~~~ft~~k~i~~~~~  509 (518)
T cd07125         482 LSGTGPKAGGPNYLLRFGNEKTVSLNTT  509 (518)
T ss_pred             cccCCcccccHHHHHHhcceEEEEEEcc
Confidence            999995 577999999999999987644

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=2.6e-52  Score=451.96  Aligned_cols=231  Identities=38%  Similarity=0.645  Sum_probs=214.4

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...|||++   .+|+.+.+.+   .++|+++|+|||||+||++|||++.++          .|+.|++++++|||++++
T Consensus       204 ~~V~ftGs~---~~g~~i~~~a---~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~  277 (453)
T cd07149         204 RMISFTGSP---AVGEAIARKA---GLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIY  277 (453)
T ss_pred             CEEEEECCH---HHHHHHHHHc---CCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHH
Confidence            344678886   8899887765   379999999999999999999999986          456699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++++++||+++..+++++.+++++++.+|++++.||..   .|+|++|||+.++++++++
T Consensus       278 d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~  354 (453)
T cd07149         278 DEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKV  354 (453)
T ss_pred             HHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHH
Confidence            9999999999999999999999999999999999999999999999999999999865   4899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIG  579 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G  579 (605)
                      ++||+||||++|++|+|++|||+++|.++|||+++|||+|.+.++++++++++|.+++        +.+||||+|.||+|
T Consensus       355 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G  434 (453)
T cd07149         355 VCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTG  434 (453)
T ss_pred             HhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccC
Confidence            9999999999999999999999999999999999999999999999999999998332        34699999999999


Q ss_pred             ChhHHHHHHHhhhceEEE
Q psy1099         580 RELGKAALDEYTELKTVT  597 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~  597 (605)
                      +++|++++++||+.|+|+
T Consensus       435 ~~~g~~~~~~~~~~k~~~  452 (453)
T cd07149         435 REGPRYAIEEMTEIKLVC  452 (453)
T ss_pred             CCChHHHHHHhhceeEEe
Confidence            999999999999999986

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=4.6e-52  Score=445.31  Aligned_cols=231  Identities=29%  Similarity=0.432  Sum_probs=211.6

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||+.   .+|+.|.+.++. +++|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       179 ~V~fTGs~---~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d  254 (443)
T cd07132         179 YIFYTGST---SVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQE  254 (443)
T ss_pred             EEEEECCh---HHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHH
Confidence            34678886   999999887775 899999999999999999999999986          3556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|.+++.+++.|+| ++.+++||+++..+++++++++++     +++++||... ..|+|++|||+.+++++|+++
T Consensus       255 ~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~  327 (443)
T cd07132         255 KFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERYIAPTVLTDVKPSDPVM  327 (443)
T ss_pred             HHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCEEeeEEEeCCCCCChHH
Confidence            999999999999998888 678999999999999999999864     4899998753 468999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIG  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~SG~G  579 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+         +.+||||+|.||+|
T Consensus       328 ~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G  407 (443)
T cd07132         328 QEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMG  407 (443)
T ss_pred             hccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccCC
Confidence            999999999999999999999999999999999999999999999999999998332         45799999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEcC
Q psy1099         580 RELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +++|.+++++||+.|+|+.+.
T Consensus       408 ~~~g~~~l~~~~~~k~v~~~~  428 (443)
T cd07132         408 AYHGKYSFDTFSHKRSCLVKS  428 (443)
T ss_pred             CcccHHHHHHhccccEEEEcc
Confidence            999999999999999998764

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=1.9e-51  Score=446.47  Aligned_cols=233  Identities=35%  Similarity=0.513  Sum_probs=215.9

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...|||++   .+|+.|.+.++   ++|+++|+||+||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       222 ~~V~ftGs~---~~g~~i~~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~  295 (473)
T cd07082         222 DVISFTGST---EVGNRLKKQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVA  295 (473)
T ss_pred             CEEEEECcH---HHHHHHHHHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHH
Confidence            344678885   89999977654   79999999999999999999999986          345599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|.+++.++++|+|.++.+++||+++..++++++++++++.++|++++.||...  .|+|++|||+.++++++++
T Consensus       296 d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~  373 (473)
T cd07082         296 DELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRL  373 (473)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999763  4899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIG  579 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~G  579 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.+++        +.+||||+|.||+|
T Consensus       374 ~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g  453 (473)
T cd07082         374 AWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIG  453 (473)
T ss_pred             HhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccC
Confidence            9999999999999999999999999999999999999999999999999999998332        24799999999999


Q ss_pred             ChhHHHHHHHhhhceEEEE
Q psy1099         580 RELGKAALDEYTELKTVTE  598 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~  598 (605)
                      +++|.+++++||+.|+|+.
T Consensus       454 ~~~g~~~l~~~~~~k~i~~  472 (473)
T cd07082         454 TQGIGDALRSMTRRKGIVI  472 (473)
T ss_pred             CCChHHHHHHhhceeEEEE
Confidence            9999999999999999975

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=2.2e-51  Score=444.70  Aligned_cols=230  Identities=27%  Similarity=0.346  Sum_probs=206.9

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccc---cceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNL---KRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED  425 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~---~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~  425 (605)
                      ...||+++   .+|+.|.+.++. ++   +|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++
T Consensus       242 ~V~ftGs~---~~g~~v~~~aa~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~  317 (500)
T TIGR01238       242 GVAFTGST---EVAQLINQTLAQ-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQED  317 (500)
T ss_pred             eEEEECCH---HHHHHHHHHHhh-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHh
Confidence            34678886   999999888876 55   8999999999999999999999886          3455999999999999


Q ss_pred             cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCc---ccCCCCeeEeeEEeecCC
Q psy1099         426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK---RKGDKGYFIEPTVFSNVT  502 (605)
Q Consensus       426 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~---~~~~~g~~~~Pti~~~~~  502 (605)
                      ++|+|+++|++++.++++|+|.++++++||++++.++++++++++++.+.|++++.++.   .....|+|++|||+.+  
T Consensus       318 i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--  395 (500)
T TIGR01238       318 VADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--  395 (500)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--
Confidence            99999999999999999999999999999999999999999999999999999874432   2223699999999973  


Q ss_pred             CCCcccccceeeeeeeeEeeC--CHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCccc
Q psy1099         503 DDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFG  571 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~--~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfG  571 (605)
                      +++.+++||+||||++|++|+  +++|||+++|+++|||+++|||+|.+.+.++++++++|.+.+         +.+|||
T Consensus       396 ~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfG  475 (500)
T TIGR01238       396 DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFG  475 (500)
T ss_pred             CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCC
Confidence            688899999999999999998  799999999999999999999999999999999999998332         336999


Q ss_pred             ccCCCCCC-ChhHHHHHHHhhhce
Q psy1099         572 GFKESGIG-RELGKAALDEYTELK  594 (605)
Q Consensus       572 G~~~SG~G-~~~g~~~~~~~~~~k  594 (605)
                      |+|.||+| +.+|.+++++||+.|
T Consensus       476 G~k~SG~G~~~gg~~~~~~~~~~k  499 (500)
T TIGR01238       476 GQGLSGTGPKAGGPHYLYRLTQVQ  499 (500)
T ss_pred             ccccccCCCccCCHHHHHHHHhhc
Confidence            99999999 799999999999987

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=1.1e-50  Score=466.00  Aligned_cols=237  Identities=31%  Similarity=0.386  Sum_probs=212.4

Q ss_pred             eEEEecCCccccHHHHHHHHHhc--cccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAAS--NLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~--~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ..|||++   .+|+.|.+.++.+  .++|+++|+|||||+||++|||++.|+          .|+.|++.+++|||++++
T Consensus       767 V~FTGS~---~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~  843 (1038)
T PRK11904        767 VAFTGST---ETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIA  843 (1038)
T ss_pred             EEEECCH---HHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHH
Confidence            3577875   8999998877752  278999999999999999999999986          344499999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~~  505 (605)
                      |+|+++|++++.++++|+|.+.++++||+|++.+++++.++++++.+ |+++++||...+  ..|+|++|||+.  .+++
T Consensus       844 d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~--~~~~  920 (1038)
T PRK11904        844 DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFE--IDSI  920 (1038)
T ss_pred             HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEc--cCCc
Confidence            99999999999999999999999999999999999999999999876 899999987543  259999999996  3567


Q ss_pred             cccccceeeeeeeeEeeC--CHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccC
Q psy1099         506 KIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFK  574 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~--~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~  574 (605)
                      .+++||+||||++|++|+  +++|||+++|.++|||+++|||+|.+.+++++.++++|.+.         ++.+||||+|
T Consensus       921 ~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~ 1000 (1038)
T PRK11904        921 SQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQG 1000 (1038)
T ss_pred             HHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCC
Confidence            789999999999999998  69999999999999999999999999999999999999833         2456999999


Q ss_pred             CCCCC-ChhHHHHHHHhhhceEEEEcCCC
Q psy1099         575 ESGIG-RELGKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       575 ~SG~G-~~~g~~~~~~~~~~k~v~~~~~~  602 (605)
                      .||+| +.+|+++++.|++.|+|+.+..+
T Consensus      1001 ~SG~G~kaGG~~~L~~f~~~ktv~~~~~~ 1029 (1038)
T PRK11904       1001 LSGTGPKAGGPHYLLRFATEKTVTVNTTA 1029 (1038)
T ss_pred             CCCCCCccchHHHHHHHhceEEEEEcccc
Confidence            99999 56789999999999999987543

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=4.4e-50  Score=429.08  Aligned_cols=229  Identities=31%  Similarity=0.490  Sum_probs=208.2

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....||+++   .+|+.|.+.++. +++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       178 ~~V~ftGs~---~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  253 (426)
T cd07087         178 DHIFFTGSP---AVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIK  253 (426)
T ss_pred             CEEEEeCCh---HHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEcHHHH
Confidence            334678885   899999887776 899999999999999999999999986          355699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|.+++.+++.++| ++.+++||+++..+++++.++++++     ++++||... ..|+|++|||+.+++++|++
T Consensus       254 d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~  326 (426)
T cd07087         254 DELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERYIAPTILDDVSPDSPL  326 (426)
T ss_pred             HHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCEEeeEEEecCCCCCHH
Confidence            9999999999999986665 4689999999999999999998765     889998653 36899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFKESGI  578 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~~SG~  578 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.         .+.+||||+|.||+
T Consensus       327 ~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~  406 (426)
T cd07087         327 MQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGM  406 (426)
T ss_pred             HhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCcccC
Confidence            999999999999999999999999999999999999999999999999999999832         24579999999999


Q ss_pred             CChhHHHHHHHhhhceEEE
Q psy1099         579 GRELGKAALDEYTELKTVT  597 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~  597 (605)
                      |+++|.+++++||+.|+++
T Consensus       407 G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         407 GAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             CCccCHHHHHHhccceeec
Confidence            9999999999999999985

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=3.6e-49  Score=458.32  Aligned_cols=236  Identities=26%  Similarity=0.343  Sum_probs=211.8

Q ss_pred             eEEEecCCccccHHHHHHHHHhc--cccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAAS--NLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~--~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ..||||+   .+|+.|.+.++..  +.+|+++|+|||||+||++|||++.++          .|+-|++.+++|||++++
T Consensus       759 V~FTGSt---~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~  835 (1208)
T PRK11905        759 VMFTGST---EVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVA  835 (1208)
T ss_pred             EEEeCCH---HHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHH
Confidence            3678885   8999998887752  259999999999999999999999986          344499999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++|++++.++++|+|.+..+++||+|++.+++++.++++++.+.|+.++.++.... ..|+|++|||+. + +++.
T Consensus       836 d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~  913 (1208)
T PRK11905        836 DRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSIS  913 (1208)
T ss_pred             HHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChH
Confidence            999999999999999999999999999999999999999999999999998887764322 469999999996 3 5678


Q ss_pred             ccccceeeeeeeeEeeC--CHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCC
Q psy1099         507 IAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKE  575 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~--~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~  575 (605)
                      +++||+||||++|++|+  +++|||+++|.++|||+++|||+|.+.++++++++++|.+.+         +.+||||+|.
T Consensus       914 ~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~  993 (1208)
T PRK11905        914 DLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGL  993 (1208)
T ss_pred             HhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCC
Confidence            99999999999999998  699999999999999999999999999999999999998432         3579999999


Q ss_pred             CCCCC-hhHHHHHHHhhhceEEEEcC
Q psy1099         576 SGIGR-ELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       576 SG~G~-~~g~~~~~~~~~~k~v~~~~  600 (605)
                      ||+|. .+|+++++.|++.|+++.++
T Consensus       994 SG~G~kaGGp~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905        994 SGTGPKAGGPLYLGRLVREAPTPIPP 1019 (1208)
T ss_pred             CCCCCcCCCHHHHHHHhhcceeeccc
Confidence            99995 78899999999999998654

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=3.5e-49  Score=456.95  Aligned_cols=231  Identities=25%  Similarity=0.345  Sum_probs=208.6

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccc------cceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEE
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNL------KRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~------~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v  422 (605)
                      ...||||+   .+|+.|.+.++. ++      +|+++|+|||||+||++|||++.++          .|+.|++.+++||
T Consensus       850 ~V~FTGSt---~tg~~I~~~aA~-~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V  925 (1318)
T PRK11809        850 GVMFTGST---EVARLLQRNLAG-RLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCL  925 (1318)
T ss_pred             EEEEeCCH---HHHHHHHHHHhh-hcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEE
Confidence            34678885   999999888776 54      8999999999999999999999986          3444999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCeeEeeEEee
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFS  499 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~---~~g~~~~Pti~~  499 (605)
                      |++++|+|+++|++++.++++|+|.+.++++||+|++.+++++.++|+++.+.|++++.|+....   ..|+|++|||+.
T Consensus       926 ~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~ 1005 (1318)
T PRK11809        926 QDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIE 1005 (1318)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEe
Confidence            99999999999999999999999999999999999999999999999999999999998875432   469999999997


Q ss_pred             cCCCCCcccccceeeeeeeeEeeC--CHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCC
Q psy1099         500 NVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQA  568 (605)
Q Consensus       500 ~~~~~~~~~~eE~FGPvl~i~~~~--~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~  568 (605)
                      .  +++.++++|+||||++|++|+  +++|||+++|.++|||+++|||+|.+.++++++++++|.+.+         +.+
T Consensus      1006 ~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~q 1083 (1318)
T PRK11809       1006 L--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQ 1083 (1318)
T ss_pred             c--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCC
Confidence            3  567889999999999999997  799999999999999999999999999999999999998332         346


Q ss_pred             cccccCCCCCCC-hhHHHHHHHhhhceE
Q psy1099         569 PFGGFKESGIGR-ELGKAALDEYTELKT  595 (605)
Q Consensus       569 PfGG~~~SG~G~-~~g~~~~~~~~~~k~  595 (605)
                      ||||+|.||+|. .+|++++..|+..+.
T Consensus      1084 PFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809       1084 PFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred             CCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence            999999999995 688999999999874

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=6.9e-48  Score=413.70  Aligned_cols=213  Identities=24%  Similarity=0.316  Sum_probs=186.6

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCC-CHHHHH----------hcccccccCeEEEeccc-H
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADA-DVDMAY----------YYCFVCAGSRTYVQEDI-Y  427 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~da-d~~~a~----------~~~~c~a~~~v~v~~~~-~  427 (605)
                      .+||||+   .+|+.|...++    +++.+|+||+||+||++|| |++.|+          .|+.|++++|+|||+++ +
T Consensus       224 V~FTGS~---~vGr~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~  296 (489)
T cd07126         224 TLFTGSS---KVAERLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQ  296 (489)
T ss_pred             EEEECCH---HHHHHHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchH
Confidence            4678885   89999876554    5799999999999999999 999986          35559999999999995 6


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCC----CC-eeEeeEEeec-
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVE-QGGKLEAGGKRKGD----KG-YFIEPTVFSN-  500 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~g~~v~~gg~~~~~----~g-~~~~Pti~~~-  500 (605)
                      |+|+++|++.+.++++|+     +++||+++.. .+++.++++++++ +|+++++||...+.    .+ .|++|||+.. 
T Consensus       297 d~f~~~l~~~~~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~  370 (489)
T cd07126         297 AGILDKLKALAEQRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVP  370 (489)
T ss_pred             HHHHHHHHHHHHhcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEec
Confidence            899999999999998874     5899999998 8999999999997 89999999976432    23 3899999842 


Q ss_pred             -----CCCCCcccccceeeeeeeeEeeCC--HHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCc--ccC------
Q psy1099         501 -----VTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS--AVV------  565 (605)
Q Consensus       501 -----~~~~~~~~~eE~FGPvl~i~~~~~--~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~--~~~------  565 (605)
                           ++++|++++||+||||++|++|+|  ++|||+++|+++|||++||||+|.++++++++++++|.  +..      
T Consensus       371 ~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~  450 (489)
T cd07126         371 LEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTG  450 (489)
T ss_pred             cccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCC
Confidence                 577999999999999999999999  99999999999999999999999999999999999999  222      


Q ss_pred             -CC----CcccccCCCCCCChhHHH
Q psy1099         566 -PQ----APFGGFKESGIGRELGKA  585 (605)
Q Consensus       566 -~~----~PfGG~~~SG~G~~~g~~  585 (605)
                       +.    .||||+|.||+|++....
T Consensus       451 ~~~~~~~~pfgg~k~sg~g~~~~~~  475 (489)
T cd07126         451 APQNHWFGPAGDPRGAGIGTPEAIR  475 (489)
T ss_pred             CCcccCcCCCCCCcccCCCCHhHHH
Confidence             22    899999999999987644

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=2e-47  Score=411.94  Aligned_cols=235  Identities=51%  Similarity=0.776  Sum_probs=217.6

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...+|++.   .+|+.+.+.++. +++|+++|+||+||+||++|+|++.++          .|+.|++++++|||+++++
T Consensus       178 ~v~ftGs~---~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~  253 (432)
T cd07078         178 KISFTGST---AVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYD  253 (432)
T ss_pred             EEEEECcH---HHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHH
Confidence            34567775   888889887776 899999999999999999999999986          3555999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCeeEeeEEeecCCCCCcc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~-~g~~~~Pti~~~~~~~~~~  507 (605)
                      +|+++|.+++.++++|+|.++++++||++++.+++++.++++++.+.|++++.||...+. .|+|++|||+.++++++++
T Consensus       254 ~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~  333 (432)
T cd07078         254 EFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPI  333 (432)
T ss_pred             HHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChh
Confidence            999999999999999999999999999999999999999999999999999999876433 5899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGIG  579 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~G  579 (605)
                      ++||+||||++|++|++++|||+++|+.++||+++|||+|.+.+++++.++++|.+.        .+.+||||+|.||+|
T Consensus       334 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g  413 (432)
T cd07078         334 AQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIG  413 (432)
T ss_pred             hhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCcCcCC
Confidence            999999999999999999999999999999999999999999999999999999832        456899999999999


Q ss_pred             ChhHHHHHHHhhhceEEE
Q psy1099         580 RELGKAALDEYTELKTVT  597 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~  597 (605)
                      +++|++++++||+.|+|+
T Consensus       414 ~~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         414 REGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             ccchHHHHHHhhceEEEE
Confidence            999999999999999985

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=6.2e-47  Score=407.36  Aligned_cols=222  Identities=20%  Similarity=0.247  Sum_probs=195.6

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhc-cccceeeecCCCCcEEEcCCC---CHHHHH----------hcccccccCeEEEe
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAAS-NLKRVSLELGGKSPLVICADA---DVDMAY----------YYCFVCAGSRTYVQ  423 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~-~~~~~~lElgG~~p~iV~~da---d~~~a~----------~~~~c~a~~~v~v~  423 (605)
                      ...+|||++   .+|+.|.+.++.+ ++||+++|+|||||+||++||   |++.|+          .|+.|++++|+|||
T Consensus       192 ~~V~fTGs~---~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~  268 (454)
T cd07129         192 KAVGFTGSR---RGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVP  268 (454)
T ss_pred             cEEEEeCCh---HHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEe
Confidence            344788986   9999998877752 699999999999999999999   788876          35559999999999


Q ss_pred             cc-cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHc-CCeEEeCCcccCCCCeeEeeEEeecC
Q psy1099         424 ED-IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQ-GGKLEAGGKRKGDKGYFIEPTVFSNV  501 (605)
Q Consensus       424 ~~-~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~-g~~v~~gg~~~~~~g~~~~Pti~~~~  501 (605)
                      ++ ++|+|+++|.+++.++++          ||++++.+.+++.+.+++++++ |++++.||+.. ..|+|++|||+...
T Consensus       269 ~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~  337 (454)
T cd07129         269 AGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAA-EGGNQAAPTLFKVD  337 (454)
T ss_pred             CcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcC-CCCCccCCEEEEcc
Confidence            99 999999999999998865          4667777777888888889888 99999999754 46999999999755


Q ss_pred             C---CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCC--HHHHHHHHHHc--ccCcccCC--------
Q psy1099         502 T---DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN--IDTANTFAHAI--NAGSAVVP--------  566 (605)
Q Consensus       502 ~---~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d--~~~~~~~~~~~--~~G~~~~~--------  566 (605)
                      .   +++++++||+||||++|++|+|.+|||+++|.++|||+++|||+|  .+.++++++++  ++|.+.+|        
T Consensus       338 ~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~  417 (454)
T cd07129         338 AAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTGVEV  417 (454)
T ss_pred             CCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCccccc
Confidence            5   689999999999999999999999999999999999999999999  79999999999  59984322        


Q ss_pred             --CCcccc-cCCCCCCCh--hHHHHHHHhhhc
Q psy1099         567 --QAPFGG-FKESGIGRE--LGKAALDEYTEL  593 (605)
Q Consensus       567 --~~PfGG-~~~SG~G~~--~g~~~~~~~~~~  593 (605)
                        .+|||| +|.||.|++  +|.+++++||++
T Consensus       418 ~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~  449 (454)
T cd07129         418 CPAMVHGGPYPATTDPRFTSVGTAAIERFLRP  449 (454)
T ss_pred             cCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence              569999 999999999  799999999986

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=5e-46  Score=398.62  Aligned_cols=223  Identities=23%  Similarity=0.249  Sum_probs=194.2

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCC-CHHHHH----------hcccccccCeEEEecc-c
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADA-DVDMAY----------YYCFVCAGSRTYVQED-I  426 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~da-d~~~a~----------~~~~c~a~~~v~v~~~-~  426 (605)
                      ..+||+++   .+|+.+.+.++.   +|+++|+|||||+||++|| |++.++          .|+.|++++|+|||++ +
T Consensus       182 ~V~fTGs~---~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i  255 (442)
T cd07084         182 MVLFTGSS---RVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWS  255 (442)
T ss_pred             EEEEECCH---HHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCcc
Confidence            34678885   899999876653   8999999999999999999 699886          3555999999999999 9


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHc-CCeEEeCCcccC------CCCeeEeeEEee
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQ-GGKLEAGGKRKG------DKGYFIEPTVFS  499 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~-g~~v~~gg~~~~------~~g~~~~Pti~~  499 (605)
                      +++|+++|.+++.++++|     ++++||++++    ++.+++++++++ |+++++||...+      ..|+|++|||+.
T Consensus       256 ~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~  326 (442)
T cd07084         256 KTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFV  326 (442)
T ss_pred             HHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEE
Confidence            999999999999999988     6889999765    455566777777 589999987521      258999999999


Q ss_pred             cCCCCC---cccccceeeeeeeeEeeCC--HHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHc-ccCcccCC-------
Q psy1099         500 NVTDDF---KIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAI-NAGSAVVP-------  566 (605)
Q Consensus       500 ~~~~~~---~~~~eE~FGPvl~i~~~~~--~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~-~~G~~~~~-------  566 (605)
                      +++++|   ++++||+||||++|++|+|  ++|||+++|+++|||+++|||+|.+.++++++++ ++|.++++       
T Consensus       327 ~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~  406 (442)
T cd07084         327 PIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGV  406 (442)
T ss_pred             ecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCc
Confidence            999997   9999999999999999999  9999999999999999999999999999999999 99995433       


Q ss_pred             --CCcccc-cCCCCCCChh-HHHHHHHhhhceEE
Q psy1099         567 --QAPFGG-FKESGIGREL-GKAALDEYTELKTV  596 (605)
Q Consensus       567 --~~PfGG-~~~SG~G~~~-g~~~~~~~~~~k~v  596 (605)
                        ..|||| +|.||+|++. |.+++++||+...+
T Consensus       407 ~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~  440 (442)
T cd07084         407 APNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE  440 (442)
T ss_pred             cccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence              257777 8899999996 99999999988664

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=8.1e-46  Score=400.23  Aligned_cols=234  Identities=16%  Similarity=0.202  Sum_probs=196.0

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc-
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED-  425 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~-  425 (605)
                      ....+||||+   .+|++|.+.++   .+++++|||||||+||++|||++.++          .|+.|++++|+|||++ 
T Consensus       278 v~~I~FTGSt---~~G~~I~~~aa---~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~  351 (551)
T TIGR02288       278 VRIIDFTGSN---AFGQWLEQNAR---QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDG  351 (551)
T ss_pred             ccEEEEECCH---HHHHHHHHhcc---cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccc
Confidence            3444689986   99999987765   47999999999999999999999986          4666999999999999 


Q ss_pred             --------cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCC-eeE
Q psy1099         426 --------IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKG-YFI  493 (605)
Q Consensus       426 --------~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~---~~g-~~~  493 (605)
                              ++|+|+++|++++.++ +|+|.++.+++||++++.+++++    +++++.| +++.||....   ..| +|+
T Consensus       352 i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~  425 (551)
T TIGR02288       352 IRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVR  425 (551)
T ss_pred             cccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEe
Confidence                    7999999999999999 99999999999999999999996    5566677 6666664321   135 689


Q ss_pred             eeEEeecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcC--CCC-ceEEEEcCCHHHHHHHHHHc----------cc
Q psy1099         494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT--KYG-LASGIVTTNIDTANTFAHAI----------NA  560 (605)
Q Consensus       494 ~Pti~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~--~~g-L~a~vft~d~~~~~~~~~~~----------~~  560 (605)
                      +|||+....++|++++||+||||++|++|+|.+|||+++|++  +|| |+++|||+|.++++++.+++          ++
T Consensus       426 ~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~  505 (551)
T TIGR02288       426 TPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLT  505 (551)
T ss_pred             ccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCC
Confidence            999995333589999999999999999999999999999998  566 99999999999999999999          88


Q ss_pred             CcccC-CCCcccccCCCCCCChhH-HHHHHHhhhceEEEEcCCC
Q psy1099         561 GSAVV-PQAPFGGFKESGIGRELG-KAALDEYTELKTVTESPLR  602 (605)
Q Consensus       561 G~~~~-~~~PfGG~~~SG~G~~~g-~~~~~~~~~~k~v~~~~~~  602 (605)
                      |.+.+ ...||++.+.||.....| ...-..|...|.-+.+.++
T Consensus       506 G~v~vN~~~~~~~~~~sg~n~~a~~~~~~~~~~~~r~~~~~~~~  549 (551)
T TIGR02288       506 GGVFVNQSAAFSDFHGTGGNPAANASLSDGAFVANRFRVVQRRR  549 (551)
T ss_pred             ceEEEccCCCCCCCCCCCCCCccCCcccchhhhhcceEEEEeec
Confidence            88554 457999999999987776 4455556666655555544

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>KOG2454|consensus

Probab=100.00  E-value=5e-46  Score=361.46  Aligned_cols=237  Identities=32%  Similarity=0.542  Sum_probs=220.0

Q ss_pred             EEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHHH
Q psy1099         361 TVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDTF  430 (605)
Q Consensus       361 ~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~~  430 (605)
                      +|.+|.   .+++.+++.+|. +++|+++|||||+|.||++|||++..+          .|+.|....|++||+++||.|
T Consensus       275 tFiGSq---pvak~i~~~AAk-~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~  350 (583)
T KOG2454|consen  275 TFIGSQ---PVAKMIMRNAAK-TLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAF  350 (583)
T ss_pred             EEecCc---HHHHHHHHhhhh-hcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHH
Confidence            567775   899999887775 999999999999999999999999764          445599999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcc----cCCCCeeEeeEEeecCCCCCc
Q psy1099         431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       431 ~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~----~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +..|.+++..++.|.|.....|||.+++.++++++++++++|+.+||+++.||.+    ....|.|++||++.+++++|.
T Consensus       351 i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMK  430 (583)
T KOG2454|consen  351 IGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMK  430 (583)
T ss_pred             HHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhh
Confidence            9999999999999999999999999999999999999999999999999999974    245799999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGI  578 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~  578 (605)
                      ++|||.||||++|+++.+.|++|+++|+++|||.++||+.|..+.++++.++++|.+.        ..++||||+|.||+
T Consensus       431 IaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGy  510 (583)
T KOG2454|consen  431 IAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGY  510 (583)
T ss_pred             hHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCc
Confidence            9999999999999999999999999999999999999999999999999999999843        34689999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcCC
Q psy1099         579 GRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      |+..|.+|+..-+..|+|...+.
T Consensus       511 GrFaG~EGLrg~Cn~Ksv~yd~~  533 (583)
T KOG2454|consen  511 GRFAGIEGLRGCCNVKSVAYDRV  533 (583)
T ss_pred             cccccHHHHHHHhcccceeccch
Confidence            99999999999999999976644

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=1.6e-45  Score=391.61  Aligned_cols=214  Identities=18%  Similarity=0.208  Sum_probs=180.8

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +..+|||++   .+|+.+++.     .||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       182 ~~I~fTGs~---~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~  253 (429)
T cd07121         182 NLLVVTGGP---AVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVA  253 (429)
T ss_pred             cEEEeeCCH---HHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEEeHHHH
Confidence            334678886   889888643     58999999999999999999999997          344499999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHc--CCeEEeCCccc---CCCCeeEe---eEEee
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQ--GGKLEAGGKRK---GDKGYFIE---PTVFS  499 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~--g~~v~~gg~~~---~~~g~~~~---Pti~~  499 (605)
                      |+|+++|+++ .              .++++..++++++++++++.+.  |++++.||...   +..|+|++   |||+.
T Consensus       254 d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~  318 (429)
T cd07121         254 DYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIV  318 (429)
T ss_pred             HHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEE
Confidence            9999998876 1              1478999999999999999864  68999988531   12578877   59999


Q ss_pred             cCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCc--eEEEEcCCHHHHHHHHHHcccCcccCC-----CCcccc
Q psy1099         500 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL--ASGIVTTNIDTANTFAHAINAGSAVVP-----QAPFGG  572 (605)
Q Consensus       500 ~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL--~a~vft~d~~~~~~~~~~~~~G~~~~~-----~~PfGG  572 (605)
                      +++++|++++||+||||++|++|+|++|||+++|.++|||  +++|||+|.+.++++++++++|.+++|     .+||||
T Consensus       319 ~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~p~gG  398 (429)
T cd07121         319 ETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSYAGLGVGG  398 (429)
T ss_pred             ecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCcCccccCC
Confidence            9999999999999999999999999999999999999999  999999999999999999999995443     579999


Q ss_pred             cCCCCC--CChhHHHH---HHHhhhceE
Q psy1099         573 FKESGI--GRELGKAA---LDEYTELKT  595 (605)
Q Consensus       573 ~~~SG~--G~~~g~~~---~~~~~~~k~  595 (605)
                      +|.|++  |..-| ++   -++||.+|.
T Consensus       399 ~k~s~~~~~~~~~-~~~~~~~~~~~~~~  425 (429)
T cd07121         399 EGYTTFTIAGPTG-EGLTSARTFTRRRR  425 (429)
T ss_pred             CccceEEecCCcC-cCccChhhhheeee
Confidence            999999  55544 33   344444443

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=5.5e-44  Score=387.06  Aligned_cols=232  Identities=16%  Similarity=0.195  Sum_probs=194.6

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc--
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED--  425 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~--  425 (605)
                      ....||||+   .+|++|.+.++   .+|+++|+|||||+||++|||++.++          .|+.|++++|+|||++  
T Consensus       279 ~~I~FTGS~---~~G~~i~~~a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i  352 (549)
T cd07127         279 RIIDFTGSN---AFGDWLEANAR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGI  352 (549)
T ss_pred             CEEEEECCH---HHHHHHHHHhc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCcc
Confidence            344688886   99999988776   37999999999999999999999986          4556999999999999  


Q ss_pred             -------cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCC-eeEe
Q psy1099         426 -------IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKG-YFIE  494 (605)
Q Consensus       426 -------~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~---~~g-~~~~  494 (605)
                             +||+|++.|++++.++ +|+|.+..+++||++++.+++++.+    +++.|+ ++.||....   ..| +|++
T Consensus       353 ~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~  426 (549)
T cd07127         353 QTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRT  426 (549)
T ss_pred             ccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEe
Confidence                   8999999999999999 9999999999999999999999865    445554 777776432   234 5679


Q ss_pred             eEEeecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCC--C-CceEEEEcCCHHHHHHHHHHcc-cCc--------
Q psy1099         495 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK--Y-GLASGIVTTNIDTANTFAHAIN-AGS--------  562 (605)
Q Consensus       495 Pti~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~--~-gL~a~vft~d~~~~~~~~~~~~-~G~--------  562 (605)
                      |||+...+++|++++||+||||++|++|+|.+|||+++|++.  + ||+++|||+|.+.++++.+++. +|.        
T Consensus       427 Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg  506 (549)
T cd07127         427 PLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTG  506 (549)
T ss_pred             CEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCc
Confidence            999998889999999999999999999999999999999973  4 6999999999999999999944 553        


Q ss_pred             --ccCCCCcccccCCCCCCChhH-HHHHHHhhhceEEEEcCC
Q psy1099         563 --AVVPQAPFGGFKESGIGRELG-KAALDEYTELKTVTESPL  601 (605)
Q Consensus       563 --~~~~~~PfGG~~~SG~G~~~g-~~~~~~~~~~k~v~~~~~  601 (605)
                        +.+.+.||||.+.||+....| ......|...|.-+.+.+
T Consensus       507 ~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~~~~~~~  548 (549)
T cd07127         507 GVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRFRVVQRR  548 (549)
T ss_pred             eEEEecCcCCCCCCCCCCCcccccccchhhhhhcceEEEEec
Confidence              122336799999999998877 445566777766665544

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=3.1e-45  Score=387.89  Aligned_cols=192  Identities=22%  Similarity=0.208  Sum_probs=167.2

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hcc-----cccccCeEEEecccHH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYC-----FVCAGSRTYVQEDIYD  428 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~~-----~c~a~~~v~v~~~~~~  428 (605)
                      +..+||||+   .+|+++++.+    +||+++|||||||+||++|||++.|+    ++.     .|++++|+|||+++||
T Consensus       193 ~~i~fTGS~---~~G~~i~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G~C~a~~rv~V~~si~d  265 (406)
T cd07079         193 DLIIPRGGA---GLIRFVVENA----TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKTQRPSVCNALETLLVHRDIAE  265 (406)
T ss_pred             cEEEeCCCH---HHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHcccCCCcccccceeEEEeHHHHH
Confidence            344788886   9999997654    69999999999999999999999997    232     5999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.+                                  .|++++.|+..    ..|++||    ++++|+++
T Consensus       266 ~f~~~l~~~~~~----------------------------------~ga~~~~g~~~----~~~~~pt----v~~d~~i~  303 (406)
T cd07079         266 EFLPKLAEALRE----------------------------------AGVELRGDEET----LAILPGA----KPATEEDW  303 (406)
T ss_pred             HHHHHHHHHHHH----------------------------------CCCEEecCHHH----HHhcccc----cCCCcchh
Confidence            999999988765                                  24565533321    1378888    78999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC---
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI---  578 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~---  578 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++       +..||||.++||+   
T Consensus       304 ~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~  383 (406)
T cd07079         304 GTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQ  383 (406)
T ss_pred             hhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecC
Confidence            999999999999999999999999999999999999999999999999999999433       3469999999998   


Q ss_pred             -CChhHHHHHHHhhhceEEEE
Q psy1099         579 -GRELGKAALDEYTELKTVTE  598 (605)
Q Consensus       579 -G~~~g~~~~~~~~~~k~v~~  598 (605)
                       |+++|++++++||+.|+++.
T Consensus       384 ~g~~~g~~~l~~~~~~k~i~~  404 (406)
T cd07079         384 KLHARGPMGLEELTTYKYIVR  404 (406)
T ss_pred             CCcCCCCcChHHhcEEEEEEe
Confidence             99999999999999999975

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=4.5e-44  Score=380.31  Aligned_cols=193  Identities=22%  Similarity=0.229  Sum_probs=164.8

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hcc-----cccccCeEEEecccHHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYC-----FVCAGSRTYVQEDIYDT  429 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~~-----~c~a~~~v~v~~~~~~~  429 (605)
                      ..+||||+   .+|+++++.+    +||+++|||||||+||++|||++.|+    +++     .|++++|+|||+++||+
T Consensus       200 ~V~fTGS~---~~g~~i~~~a----~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G~C~a~~rv~V~~~i~d~  272 (417)
T PRK00197        200 VIIPRGGA---GLIRRVVENA----TVPVIEHGDGICHIYVDESADLDKALKIVLNAKTQRPSVCNALETLLVHEAIAEE  272 (417)
T ss_pred             EEEecCCH---HHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHhccCCCcccccceEEEEEHHHhHH
Confidence            34678885   8999887643    69999999999999999999999997    333     49999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccc
Q psy1099         430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR  509 (605)
Q Consensus       430 ~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~  509 (605)
                      |+++|++++++++.+                                  ++ |+...  .+ |+ |||+   +++|++++
T Consensus       273 f~~~l~~~~~~~~~~----------------------------------~~-~~~~~--~~-~~-PTi~---~~~~~i~~  310 (417)
T PRK00197        273 FLPKLAEALAEAGVE----------------------------------LR-GDEAA--LA-LL-PDVV---PATEEDWD  310 (417)
T ss_pred             HHHHHHHHHHHCCCe----------------------------------Ee-cCHHH--HH-hh-cccc---cCCcchhh
Confidence            999999999887532                                  11 11110  12 22 9998   46899999


Q ss_pred             cceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC---
Q psy1099         510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG---  579 (605)
Q Consensus       510 eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G---  579 (605)
                      ||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.+++       +..||||.|.||+|   
T Consensus       311 eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~  390 (417)
T PRK00197        311 TEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQK  390 (417)
T ss_pred             hhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCC
Confidence            99999999999999999999999999999999999999999999999999999443       34699999999999   


Q ss_pred             -ChhHHHHHHHhhhceEEEEcC
Q psy1099         580 -RELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       580 -~~~g~~~~~~~~~~k~v~~~~  600 (605)
                       +++|.+++++||+.|+++.+.
T Consensus       391 ~~~~g~~~l~~~~~~k~v~~~~  412 (417)
T PRK00197        391 LHARGPMGLEELTTYKYIVLGD  412 (417)
T ss_pred             CcCCCccchHhhcEEEEEEECC
Confidence             999999999999999998643

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=8.8e-44  Score=378.01  Aligned_cols=216  Identities=20%  Similarity=0.231  Sum_probs=179.1

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDT  429 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~  429 (605)
                      .+|||++   .    +.+.++. ++||+++|+|||||+||++|||++.|+          .|+.|++.+|+|||+++||+
T Consensus       182 V~FTGs~---~----v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~  253 (439)
T cd07081         182 LLATGGP---A----VVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDE  253 (439)
T ss_pred             EEEECCH---H----HHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHHH
Confidence            3566663   2    4445554 899999999999999999999999986          44459999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCc-c-cCCCCeeEeeE---EeecCC--
Q psy1099         430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK-R-KGDKGYFIEPT---VFSNVT--  502 (605)
Q Consensus       430 ~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~-~-~~~~g~~~~Pt---i~~~~~--  502 (605)
                      |+++|+++.               ||+++.++++++.++++++.++|++++.|+. . ....|+|++||   ++.+++  
T Consensus       254 f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~  318 (439)
T cd07081         254 VMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIGEVTSL  318 (439)
T ss_pred             HHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEEecCCC
Confidence            999998774               8999999999999999999999998764432 1 11358999998   998888  


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcC----CCCceEEEEcCC---HHHHHHHHHHcccCcccCCCC-cccccC
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDT----KYGLASGIVTTN---IDTANTFAHAINAGSAVVPQA-PFGGFK  574 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~----~~gL~a~vft~d---~~~~~~~~~~~~~G~~~~~~~-PfGG~~  574 (605)
                      ++|.+++||+||||++|++|+|+||||+++|++    +|||+++|||+|   .++++++++++++|.+++|.. +||+.+
T Consensus       319 ~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~~~g  398 (439)
T cd07081         319 AEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQGGLG  398 (439)
T ss_pred             CCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCccccccc
Confidence            999999999999999999999999999999965    799999999999   999999999999999777654 477777


Q ss_pred             CCCC-----------CChhH---HH--HHHHhhhceEEEE
Q psy1099         575 ESGI-----------GRELG---KA--ALDEYTELKTVTE  598 (605)
Q Consensus       575 ~SG~-----------G~~~g---~~--~~~~~~~~k~v~~  598 (605)
                      ..+.           |..+|   .+  +.++|++.|.|.+
T Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (439)
T cd07081         399 DLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL  438 (439)
T ss_pred             cccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence            6544           22111   11  4788888888764

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=9.9e-44  Score=380.76  Aligned_cols=215  Identities=20%  Similarity=0.194  Sum_probs=176.3

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----h------cccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----Y------YCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~------~~~c~a~~~v~v~~~~~~  428 (605)
                      ...|||++   .+|+.+++     ..+|+++|+|||||+||++|||++.|+    +      |+.|++++|+|||++++|
T Consensus       215 ~I~fTGS~---~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d  286 (465)
T PRK15398        215 LLVVTGGP---AVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVAD  286 (465)
T ss_pred             EEEeeCCH---HHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEEeHHHHH
Confidence            34678885   88988876     368999999999999999999999997    3      444999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcc---cCCCCeeE---eeEEeecCC
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR---KGDKGYFI---EPTVFSNVT  502 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~---~~~~g~~~---~Pti~~~~~  502 (605)
                      +|+++|+++.               +|+++..+++++.++++++.+.+++++.|+..   .+..|+++   +|||+.+++
T Consensus       287 ~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~  351 (465)
T PRK15398        287 ELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIVETD  351 (465)
T ss_pred             HHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEEEecCC
Confidence            9999998761               26899999999999998654445577777642   12246666   489999999


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCc--eEEEEcCCHHHHHHHHHHcccCcccCC-----CCcccccCC
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL--ASGIVTTNIDTANTFAHAINAGSAVVP-----QAPFGGFKE  575 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL--~a~vft~d~~~~~~~~~~~~~G~~~~~-----~~PfGG~~~  575 (605)
                      ++|++++||+||||++|++|+|++|||+++|+++|||  ++||||+|.+.++++++++++|.+.+|     .+||||+|.
T Consensus       352 ~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~~~~~p~gg~~~  431 (465)
T PRK15398        352 ANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPSYAGLGLGGEGF  431 (465)
T ss_pred             CCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCCccccCcCCCCC
Confidence            9999999999999999999999999999999999999  999999999999999999999995443     579999999


Q ss_pred             CCCCChhHHHHHHHhhhceEEEE
Q psy1099         576 SGIGRELGKAALDEYTELKTVTE  598 (605)
Q Consensus       576 SG~G~~~g~~~~~~~~~~k~v~~  598 (605)
                      |.+-- +|+.| ...|..|+++.
T Consensus       432 s~~~~-~~~~g-~~~~~~~~~~~  452 (465)
T PRK15398        432 TTFTI-ATPTG-EGVTSARTFTR  452 (465)
T ss_pred             ceeee-cccCC-CCccchhhhhh
Confidence            97611 13333 44444444443

>KOG2455|consensus

Probab=100.00  E-value=2.2e-42  Score=341.57  Aligned_cols=215  Identities=30%  Similarity=0.454  Sum_probs=194.5

Q ss_pred             cccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHHHHHHHHHHHhhcccCCC-CCCCC
Q psy1099         383 NLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDP-FDKSV  451 (605)
Q Consensus       383 ~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~~~~~l~~~~~~~~~g~~-~~~~~  451 (605)
                      +..|++.|.||||-.+|+++||++.++          .|+.|++.+|+||+++.|..+.++|.+...++++||| .|.++
T Consensus       304 ~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~  383 (561)
T KOG2455|consen  304 TFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFST  383 (561)
T ss_pred             cchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccc
Confidence            567899999999999999999999986          3444999999999999999999999999999999998 78899


Q ss_pred             CCCcccCHHHHHHHHHHHHHHHHc-CCeEEeCCcccCCCCeeEeeEEeecCCCCCcccccceeeeeeeeEeeCC--HHHH
Q psy1099         452 QQGPQVDAEMFTKVLNYIKSGVEQ-GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEV  528 (605)
Q Consensus       452 ~~gpli~~~~~~~~~~~i~~a~~~-g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~eE~FGPvl~i~~~~~--~~ea  528 (605)
                      .+||+|+..++.|++++++.+... ...|++||+++++.|+|+.|||+..-+|.+++|.||+|||||+|+.|+|  ++|+
T Consensus       384 f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~  463 (561)
T KOG2455|consen  384 FIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEV  463 (561)
T ss_pred             hhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHH
Confidence            999999999999999999998765 5689999999999999999999999999999999999999999999995  7999


Q ss_pred             HHHh-hcCCCCceEEEEcCCHHHHHHHHHHccc--Cc---------ccCCCCcccccCCCCCCCh-hHHHHHHHhhhceE
Q psy1099         529 IERA-NDTKYGLASGIVTTNIDTANTFAHAINA--GS---------AVVPQAPFGGFKESGIGRE-LGKAALDEYTELKT  595 (605)
Q Consensus       529 i~~~-n~~~~gL~a~vft~d~~~~~~~~~~~~~--G~---------~~~~~~PfGG~~~SG~G~~-~g~~~~~~~~~~k~  595 (605)
                      ++++ |.++||||.+||++|.+.+.+..++++.  |.         ..+..+||||-+.||+... +|++-+..|+.+++
T Consensus       464 l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~  543 (561)
T KOG2455|consen  464 LKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLS  543 (561)
T ss_pred             HHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcch
Confidence            9998 6789999999999999999999998884  44         3457899999999999866 45777888887777


Q ss_pred             EE
Q psy1099         596 VT  597 (605)
Q Consensus       596 v~  597 (605)
                      |-
T Consensus       544 ik  545 (561)
T KOG2455|consen  544 IK  545 (561)
T ss_pred             hh
Confidence            63

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=1.5e-41  Score=379.97  Aligned_cols=195  Identities=19%  Similarity=0.206  Sum_probs=165.3

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH---------hcccccccCeEEEecccH
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY---------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~---------~~~~c~a~~~v~v~~~~~  427 (605)
                      .+..+||||+      +.+.+.++ +++||+++|||||||+||++|||++.|+         +++.|++.+|+|||+++|
T Consensus       485 v~~V~FTGSt------~~i~~~aa-~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~nGQ~C~a~~RllVh~~i~  557 (718)
T PLN02418        485 IDLVIPRGSN------KLVSQIKA-STKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDYPAACNAMETLLVHKDLV  557 (718)
T ss_pred             CCEEEEeCCH------HHHHHHHH-hcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCCCCccccCcEEEEecccc
Confidence            4455778884      24444444 4899999999999999999999999986         334499999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+                        |         .+.+++++++++|+++ .||+...  |      ++. + ++|++
T Consensus       558 d~------------------------G---------~~~~~i~~a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i  593 (718)
T PLN02418        558 QN------------------------G---------GLNDLLVALRSAGVTL-YGGPRAS--K------LLN-I-PEAQS  593 (718)
T ss_pred             cc------------------------c---------cHHHHHHHHHHCCCEE-ECCcccc--C------eeC-C-CCchh
Confidence            97                        1         2478999999999999 6775421  4      233 3 78999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC--
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI--  578 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~--  578 (605)
                      ++||+|||+++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.+++       +..||||+|+||+  
T Consensus       594 ~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~st  673 (718)
T PLN02418        594 FHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGIST  673 (718)
T ss_pred             hhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccC
Confidence            9999999999999999999999999999999999999999999999999999999433       3459999999999  


Q ss_pred             CChh--HHHHHHHhhhceEEEEcCCC
Q psy1099         579 GREL--GKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       579 G~~~--g~~~~~~~~~~k~v~~~~~~  602 (605)
                      |+++  |++++++||+.|+|+....+
T Consensus       674 Gr~~~~G~~gl~~~t~~K~v~~g~g~  699 (718)
T PLN02418        674 GRIHARGPVGVEGLLTTRWILRGNGQ  699 (718)
T ss_pred             CcCCCCCHHHHHHHhcEEEEEECCCe
Confidence            9885  99999999999999865543

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=1.6e-40  Score=358.06  Aligned_cols=214  Identities=18%  Similarity=0.132  Sum_probs=183.4

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDT  429 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~  429 (605)
                      ..+||++   .    +.+.+. ++.+|+++|+|||||+||++|||++.|+          .|+.|++.+|+|||+++||+
T Consensus       191 V~fTGs~---~----v~~~a~-~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~  262 (488)
T TIGR02518       191 ILATGGE---A----MVKAAY-SSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDA  262 (488)
T ss_pred             EEEeCCH---H----HHHHHH-HcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHHH
Confidence            3556663   2    334443 3789999999999999999999999997          34459999999999999999


Q ss_pred             HHHHHHHH-------HhhcccCCC-CCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecC
Q psy1099         430 FVKKAVEK-------AAARKVGDP-FDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNV  501 (605)
Q Consensus       430 ~~~~l~~~-------~~~~~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~  501 (605)
                      |+++|+++       .+++++|+| .++.+++||+++..+++++.++++.++.+|+++++||..              ++
T Consensus       263 f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~--------------~v  328 (488)
T TIGR02518       263 VVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN--------------GV  328 (488)
T ss_pred             HHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC--------------CC
Confidence            99999998       899999996 678899999999999999999999999999999999853              35


Q ss_pred             CCCCcccccceeeeeeeeEeeCCHHHHHHHhhc----CCCCceEEEEcCCHHHHHHHHHHcccCcccCC-----------
Q psy1099         502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERAND----TKYGLASGIVTTNIDTANTFAHAINAGSAVVP-----------  566 (605)
Q Consensus       502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~----~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~~-----------  566 (605)
                      .+++++ ++|+||||++|++|+|++|||+++|+    .+|||+++|||+|.+.+++|++++++|.+.+|           
T Consensus       329 ~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~  407 (488)
T TIGR02518       329 GNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGSLGGIGAT  407 (488)
T ss_pred             CCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCcccccccc
Confidence            677776 79999999999999999999999887    68999999999999999999999999984443           


Q ss_pred             --CCc-----ccccCCCCCCChhHHHHHHHhhhceEEEEc
Q psy1099         567 --QAP-----FGGFKESGIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       567 --~~P-----fGG~~~SG~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                        ..|     ||+++.+++.  + +-++++++..|.|.+.
T Consensus       408 t~~~~~~~~G~G~~~g~st~--~-~v~~~~l~~~k~v~~~  444 (488)
T TIGR02518       408 TNLVPAFTLGCGAVGGSSTS--D-NITPENLINIRRVAYG  444 (488)
T ss_pred             cCCCccccccccccCCCcCC--C-CCCHHHhheeeEEEec
Confidence              234     6677666666  2 7789999999998764

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=1e-40  Score=353.87  Aligned_cols=201  Identities=18%  Similarity=0.226  Sum_probs=172.0

Q ss_pred             ccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHHHHHHHHHHHhhc-------ccC
Q psy1099         382 SNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAAAR-------KVG  444 (605)
Q Consensus       382 ~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~~~~~l~~~~~~~-------~~g  444 (605)
                      ++++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|+|+++|+++...+       ++|
T Consensus       196 ~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~  275 (436)
T cd07122         196 SSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLE  275 (436)
T ss_pred             hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHH
Confidence            3899999999999999999999999986          34459999999999999999999999998887       888


Q ss_pred             CC-CCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccccceeeeeeeeEeeC
Q psy1099         445 DP-FDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  523 (605)
Q Consensus       445 ~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~eE~FGPvl~i~~~~  523 (605)
                      ++ .+..+++||+++..+.+++..+++.+...|++++.++              +.+++++|+++ +|.||||++|++|+
T Consensus       276 ~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~  340 (436)
T cd07122         276 KALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE--------------ETGVGPEEPLS-REKLSPVLAFYRAE  340 (436)
T ss_pred             HHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe--------------cCCCCCCCcch-hcccCCeEEEEEeC
Confidence            88 4677889999999999988888777777777777554              35788899987 56799999999999


Q ss_pred             CHHHHHHHhhcC----CCCceEEEEcCCHHHHHHHHHHcccCcccCCCCc-ccccCCCCCCCh----------h-----H
Q psy1099         524 TLDEVIERANDT----KYGLASGIVTTNIDTANTFAHAINAGSAVVPQAP-FGGFKESGIGRE----------L-----G  583 (605)
Q Consensus       524 ~~~eai~~~n~~----~~gL~a~vft~d~~~~~~~~~~~~~G~~~~~~~P-fGG~~~SG~G~~----------~-----g  583 (605)
                      |++|||+++|++    +|||++||||+|.++++++++++++|.+++|..+ |||+|.++.|-.          +     +
T Consensus       341 ~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  420 (436)
T cd07122         341 DFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSD  420 (436)
T ss_pred             CHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCccccccCccCCCCCceeeeeccccCCCcCCC
Confidence            999999999997    8999999999999999999999999998777654 899998877322          1     1


Q ss_pred             HHHHHHhhhceEEE
Q psy1099         584 KAALDEYTELKTVT  597 (605)
Q Consensus       584 ~~~~~~~~~~k~v~  597 (605)
                      .-+.++|+..|.|-
T Consensus       421 ~~~~~~~~~~~~~~  434 (436)
T cd07122         421 NVGPKHLLNIKRVA  434 (436)
T ss_pred             CCChHHhheeEeec
Confidence            23467777777764

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-39  Score=373.97  Aligned_cols=207  Identities=18%  Similarity=0.198  Sum_probs=178.2

Q ss_pred             HHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHHHHHHHHHHHhhcccCCC
Q psy1099         377 AAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDP  446 (605)
Q Consensus       377 ~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~~~~~l~~~~~~~~~g~~  446 (605)
                      +.++ ++++|+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|+|+++|+++.        
T Consensus       205 ~~a~-~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g--------  275 (862)
T PRK13805        205 KAAY-SSGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG--------  275 (862)
T ss_pred             HHHH-hcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC--------
Confidence            3443 4899999999999999999999999997          34449999999999999999999987762        


Q ss_pred             CCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeE-EeCCccc---CCCCeeEeeEE------eecCCCCCcccccceeeee
Q psy1099         447 FDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKL-EAGGKRK---GDKGYFIEPTV------FSNVTDDFKIAREEIFGPV  516 (605)
Q Consensus       447 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v-~~gg~~~---~~~g~~~~Pti------~~~~~~~~~~~~eE~FGPv  516 (605)
                             +|+++..++++++++++++.+.+++. +.||...   ...|+|++||+      +.++.+++++++ |+||||
T Consensus       276 -------~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPV  347 (862)
T PRK13805        276 -------AYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPV  347 (862)
T ss_pred             -------CeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcE
Confidence                   58999999999999999886655532 4465421   12488899997      678899999887 799999


Q ss_pred             eeeEeeCCHHHHHHHhhc----CCCCceEEEEcCCHHHHHHHHHHcccCcc-----------------cCCCCcccccCC
Q psy1099         517 QTIIKFKTLDEVIERAND----TKYGLASGIVTTNIDTANTFAHAINAGSA-----------------VVPQAPFGGFKE  575 (605)
Q Consensus       517 l~i~~~~~~~eai~~~n~----~~~gL~a~vft~d~~~~~~~~~~~~~G~~-----------------~~~~~PfGG~~~  575 (605)
                      ++|++|+|++|||+++|+    .+|||+++|||+|.+.++++++++++|.+                 ..+.+|||| |.
T Consensus       348 l~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~  426 (862)
T PRK13805        348 LAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GS  426 (862)
T ss_pred             EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cC
Confidence            999999999999999988    48999999999999999999999999982                 234579998 99


Q ss_pred             CCCCChhHHHHHHHhhhceEEEEcCC
Q psy1099         576 SGIGRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       576 SG~G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      ||+|.++|+.++++|++.|+|..++.
T Consensus       427 ~g~~~~~g~~g~~~~~~~k~v~~~~~  452 (862)
T PRK13805        427 WGGNSVSENVGAKHLLNIKTVAKRRE  452 (862)
T ss_pred             CCCCcCCCCCCHHHhheeeeeeeccc
Confidence            99999999999999999999987654

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=2.8e-39  Score=362.61  Aligned_cols=196  Identities=18%  Similarity=0.171  Sum_probs=166.0

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH---------hcccccccCeEEEecccH
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY---------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~---------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....+||||+   .+|+.+++.++    ||+++|||||||+||++|||++.|+         +|+.|++++|+|||++++
T Consensus       477 vd~I~fTGS~---~vG~~i~~~A~----~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~GQ~C~a~~rvlV~~~i~  549 (715)
T TIGR01092       477 IDLVIPRGSN---KLVSQIKKSTK----IPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDYPAACNAMETLLVHKDLL  549 (715)
T ss_pred             ccEEEEcCCH---HHHHHHHHhCC----CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCCCCccccCcEEEEehhhc
Confidence            4455789996   99999987652    9999999999999999999999996         445599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+                         |        .+.++++.+.++|++++ ||...+  + |+.   +  .++++++
T Consensus       550 d~-------------------------~--------~~~~~v~~~~~~Ga~l~-Gg~~~~--~-~~~---~--~~~~~~i  587 (715)
T TIGR01092       550 RN-------------------------G--------LLDDLIDMLRTEGVTIH-GGPRFA--A-YLT---F--NISETKS  587 (715)
T ss_pred             cc-------------------------h--------hHHHHHHHHHHCCCEEE-CCcchh--h-eec---c--CCCCchh
Confidence            85                         0        25567777778899985 775421  2 332   1  3568999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|++++       ...||||+|+||+|+
T Consensus       588 ~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~  667 (715)
T TIGR01092       588 FRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGIST  667 (715)
T ss_pred             hhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCcccccccc
Confidence            9999999999999999999999999999999999999999999999999999998433       346999999999996


Q ss_pred             ----hhHHHHHHHhhhceEEEEcCC
Q psy1099         581 ----ELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       581 ----~~g~~~~~~~~~~k~v~~~~~  601 (605)
                          .+|++++++||+.|+|.....
T Consensus       668 ~~~~~~g~~~l~~~~~~k~v~~g~g  692 (715)
T TIGR01092       668 SRIHARGPVGVEGLLTTRWLLRGKG  692 (715)
T ss_pred             CCCCCCChhHHHHhceEEEEEECCC
Confidence                379999999999999986544

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>KOG2450|consensus

Probab=100.00  E-value=2.4e-39  Score=330.61  Aligned_cols=254  Identities=58%  Similarity=1.004  Sum_probs=233.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ..||++|||++||+||+||+|++|+|+.++++++++||+|+||+|+|+|.+.+++..+                      
T Consensus       175 ~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~  254 (501)
T KOG2450|consen  175 QAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIM  254 (501)
T ss_pred             HHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHh
Confidence            5799999999999999999999999999999999999999999999999776543211                      


Q ss_pred             --------h------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHHHhc-C
Q psy1099          60 --------R------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA-R   94 (605)
Q Consensus        60 --------~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~-~   94 (605)
                              +                                    +.|.+    .+|+|||++|||+|++++++++.+ +
T Consensus       255 ~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a----~sR~~Vqe~iydefv~~~v~~a~~~~  330 (501)
T KOG2450|consen  255 EAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTA----GSRVFVQESIYDEFVEKFVAAAKKKL  330 (501)
T ss_pred             hhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhccccccccc----CceeEEechHHHHHHHHHHHHHhccc
Confidence                    0                                    12333    389999999999999999999966 9


Q ss_pred             ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      ++|+|++..+.+||++++.+++++..+|+.+.++|+++.+||.+                                    
T Consensus       331 kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~------------------------------------  374 (501)
T KOG2450|consen  331 KVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVR------------------------------------  374 (501)
T ss_pred             ccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcc------------------------------------
Confidence            99999999999999999999999999999998888888888743                                    


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                            .+..|||++|
T Consensus       375 ----------------------------------------------------------------------~g~~Gyfi~P  384 (501)
T KOG2450|consen  375 ----------------------------------------------------------------------LGDKGYFIKP  384 (501)
T ss_pred             ----------------------------------------------------------------------cCCCceEECC
Confidence                                                                                  1247999999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA  334 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~  334 (605)
                      |++.++.++|.+++||+||||++|++|++.||+|+++|++.|||+++|||+|.+++++++.++++|+||||++.......
T Consensus       385 tv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~  464 (501)
T KOG2450|consen  385 TVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQV  464 (501)
T ss_pred             eeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         335 PFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||||+|+||+|++.|.++++.|++.|+++..
T Consensus       465 PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~  495 (501)
T KOG2450|consen  465 PFGGFKMSGIGRELGEYGLEAYTEVKTVTVK  495 (501)
T ss_pred             CccccccccCCccccHHHHhhcceeeEEEEe
Confidence            9999999999999999999999999998875

>KOG2452|consensus

Probab=100.00  E-value=4.1e-39  Score=319.98  Aligned_cols=253  Identities=43%  Similarity=0.725  Sum_probs=230.3

Q ss_pred             CCchHHhHHhhh-cccceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hccc----
Q psy1099         343 GIGRELGKAALD-EYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYCF----  413 (605)
Q Consensus       343 G~G~~~G~~~~~-~~~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~~~----  413 (605)
                      |.|+-.|+...+ +-.+..-||+|   +.+|+.+++.++.++.|+|.|||||++|.||+.|+|+++|+    .+.|    
T Consensus       607 gsgslvg~rls~hpdvrkigftgs---teig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kg  683 (881)
T KOG2452|consen  607 GSGSLVGQRLSDHPDVRKIGFTGS---TEVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKG  683 (881)
T ss_pred             CCcchhccccccCCccceeccccc---hHHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCC
Confidence            445666665433 23344457777   49999999999999999999999999999999999999997    2222    


Q ss_pred             --ccccCeEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCe
Q psy1099         414 --VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  491 (605)
Q Consensus       414 --c~a~~~v~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~  491 (605)
                        |.+..|+||..++.|+|+.++++++.++++|+|+|.+++.||.-..+++.++.++++.++..|+++.+||.+.+.+|+
T Consensus       684 enciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~  763 (881)
T KOG2452|consen  684 ENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGF  763 (881)
T ss_pred             cchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCc
Confidence              999999999999999999999999999999999999999999999999999999999999999999999999889999


Q ss_pred             eEeeEEeecCCCCCcccccceeeeeeeeEeeC--CHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC----
Q psy1099         492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV----  565 (605)
Q Consensus       492 ~~~Pti~~~~~~~~~~~~eE~FGPvl~i~~~~--~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~----  565 (605)
                      |++|||+.++..++-+..||.||||+.|.+|+  |++.++..+|.+.+||+++|||+|.....++++.+++|++.+    
T Consensus       764 ~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~  843 (881)
T KOG2452|consen  764 FFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYN  843 (881)
T ss_pred             ccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeecc
Confidence            99999999999999999999999999999999  488999999999999999999999999999999999999433    


Q ss_pred             ---CCCcccccCCCCCCChhHHHHHHHhhhceEEEE
Q psy1099         566 ---PQAPFGGFKESGIGRELGKAALDEYTELKTVTE  598 (605)
Q Consensus       566 ---~~~PfGG~~~SG~G~~~g~~~~~~~~~~k~v~~  598 (605)
                         -..||||+|+||+|+..|..++.+|.+.|+|+.
T Consensus       844 ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~  879 (881)
T KOG2452|consen  844 KTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTF  879 (881)
T ss_pred             ccccccCCCCccccccccchhHHHHhhheeeEEEEe
Confidence               246999999999999999999999999999986

>KOG2453|consensus

Probab=100.00  E-value=5.4e-38  Score=300.23  Aligned_cols=237  Identities=30%  Similarity=0.479  Sum_probs=213.5

Q ss_pred             EEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHHH
Q psy1099         361 TVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDTF  430 (605)
Q Consensus       361 ~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~~  430 (605)
                      ++|++.   ++|+.+.....+ +.-+..|||||+|+.||.+|||+..++          .++-|+..+|+++|+++||++
T Consensus       240 sftGss---QvgKsvgq~vqa-rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~v  315 (507)
T KOG2453|consen  240 SFTGSS---QVGKSVGQQVQA-RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQV  315 (507)
T ss_pred             ccccch---hhhhHHHHHHHH-HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHH
Confidence            456664   778877777766 677889999999999999999998764          445599999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccccc
Q psy1099         431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIARE  510 (605)
Q Consensus       431 ~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~e  510 (605)
                      +++|+...+++++|+|+|+++.+||+.++.+..+.+..++++..+|++++.||+..+.+|+|+.|||+. ...|.++..+
T Consensus       316 lerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~  394 (507)
T KOG2453|consen  316 LERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLR  394 (507)
T ss_pred             HHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhh
Confidence            999999999999999999999999999999999999999999999999999999988999999999997 8999999999


Q ss_pred             ceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcc--cCcccC--CC------CcccccCCCCCCC
Q psy1099         511 EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN--AGSAVV--PQ------APFGGFKESGIGR  580 (605)
Q Consensus       511 E~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~--~G~~~~--~~------~PfGG~~~SG~G~  580 (605)
                      |.|.|||+|.+|.+++||+.+-|+.+.||+.+|||+|.+.+-++..-.-  ||.+.+  |.      -.|||-|+.|.|+
T Consensus       395 etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggr  474 (507)
T KOG2453|consen  395 ETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGR  474 (507)
T ss_pred             hhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCc
Confidence            9999999999999999999999999999999999999999999886544  555332  21      3799999999999


Q ss_pred             hhHHHHHHHhhhceEEEEcCCC
Q psy1099         581 ELGKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~~~~  602 (605)
                      +.|.++.++|+++.+++++..+
T Consensus       475 esgsdswkqymrrstctinysk  496 (507)
T KOG2453|consen  475 ESGSDSWKQYMRRSTCTINYSK  496 (507)
T ss_pred             ccCchHHHHHHhhceeeeeccc
Confidence            9999999999999999987654

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.7e-37  Score=313.59  Aligned_cols=231  Identities=27%  Similarity=0.393  Sum_probs=193.3

Q ss_pred             EEecCCccccHHHHHHHHHhc--cccceeeecCCCCcEEEcCCCCHHHHH----hccc------ccccCeEEEecccHHH
Q psy1099         362 VTESPLRSYTSHSIMAAAAAS--NLKRVSLELGGKSPLVICADADVDMAY----YYCF------VCAGSRTYVQEDIYDT  429 (605)
Q Consensus       362 ~t~s~~~~~~g~~v~~~~a~~--~~~~~~lElgG~~p~iV~~dad~~~a~----~~~~------c~a~~~v~v~~~~~~~  429 (605)
                      ||+|+   .+.+.|.+..+.+  ...|++.|.||.|.+||+++|-.+..+    .+.|      |++.+.+|+++++.|+
T Consensus       321 FTGST---evA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~  397 (769)
T COG4230         321 FTGST---EVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADR  397 (769)
T ss_pred             EeCcH---HHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHH
Confidence            45553   5555555555442  368899999999999999999888775    3333      9999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCeeEeeEEeecCCCCCccc
Q psy1099         430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       430 ~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      .+++|+..+..+++|+|....+|+||+|+....+.++++|+.....|-.+..-....+ ..|.|++||++. + +...-+
T Consensus       398 ~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~E-l-~~~~eL  475 (769)
T COG4230         398 ILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE-L-ENLDEL  475 (769)
T ss_pred             HHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEE-c-CCHHHH
Confidence            9999999999999999999999999999999999999999998877755543322222 479999999995 2 223446


Q ss_pred             ccceeeeeeeeEeeC--CHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCc---------ccCCCCcccccCCCC
Q psy1099         509 REEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESG  577 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~--~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~---------~~~~~~PfGG~~~SG  577 (605)
                      +.|+|||||.|++|+  ++++.|+-+|.+.||||.+|+|+..+.+.++.+++.+|.         .++..+||||.|.||
T Consensus       476 ~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSG  555 (769)
T COG4230         476 QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSG  555 (769)
T ss_pred             HHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCC
Confidence            899999999999998  689999999999999999999999999999999999998         334568999999999


Q ss_pred             CCCh-hHHHHHHHhhhceEEE
Q psy1099         578 IGRE-LGKAALDEYTELKTVT  597 (605)
Q Consensus       578 ~G~~-~g~~~~~~~~~~k~v~  597 (605)
                      +|.. +|+..+..|+..+...
T Consensus       556 TGPKAGGp~YL~Rl~~~~p~~  576 (769)
T COG4230         556 TGPKAGGPLYLLRLVSERPWS  576 (769)
T ss_pred             CCCCCCChHHHHHHHhcCCcC
Confidence            9977 5689999998777643

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=3.6e-37  Score=326.78  Aligned_cols=187  Identities=19%  Similarity=0.144  Sum_probs=160.4

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH---------hcccccccCeEEEecccHHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY---------YYCFVCAGSRTYVQEDIYDTF  430 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~---------~~~~c~a~~~v~v~~~~~~~~  430 (605)
                      ..+||++   .+++.+.+.+   .++|+++|+||+||+||++|||++.|+         +|+.|++++++|||++++|+|
T Consensus       185 v~ftGs~---~~~~~v~~~~---~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~GQ~C~a~~~v~V~~~i~d~~  258 (397)
T cd07077         185 IVATGGR---DAVDAAVKHS---PHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQNACASEQNLYVVDDVLDPL  258 (397)
T ss_pred             EEecCCH---HHHHHHHHcC---CCCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccCCccCCCCeEEEEehhhhHHH
Confidence            3566764   6777775544   258999999999999999999999986         455599999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccccc
Q psy1099         431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIARE  510 (605)
Q Consensus       431 ~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~e  510 (605)
                      +++|.+++..                                  .|++++.||.     ++|+.||      +++++++|
T Consensus       259 ~~~l~~~~~~----------------------------------~G~~~~~g~~-----~~~~~pt------~~~~~~~~  293 (397)
T cd07077         259 YEEFKLKLVV----------------------------------EGLKVPQETK-----PLSKETT------PSFDDEAL  293 (397)
T ss_pred             HHHHHHHHHh----------------------------------cCcCcCCCce-----eeEEecc------CCCChhhh
Confidence            9999988764                                  4677776652     4677786      78899999


Q ss_pred             ceeeeeeeeEeeCCHH----HHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccC--C
Q psy1099         511 EIFGPVQTIIKFKTLD----EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFK--E  575 (605)
Q Consensus       511 E~FGPvl~i~~~~~~~----eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~--~  575 (605)
                      |+||||++|++|+|++    +|++++|+++|||+++|||+|.+.++++++++++|++.+         ...||||++  .
T Consensus       294 E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~  373 (397)
T cd07077         294 ESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVT  373 (397)
T ss_pred             hhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEE
Confidence            9999999999999996    666788999999999999999999999999999998432         346899999  8


Q ss_pred             CCCCChhH-HHHHHHhhhceEEE
Q psy1099         576 SGIGRELG-KAALDEYTELKTVT  597 (605)
Q Consensus       576 SG~G~~~g-~~~~~~~~~~k~v~  597 (605)
                      ||+|+++| .+++++|++.|+|+
T Consensus       374 SG~g~~~g~~~~~~~~~~~k~v~  396 (397)
T cd07077         374 SGMNNIFGAGVGHDALRPLKRLV  396 (397)
T ss_pred             ccccCCCCCCCChHHhcceeEee
Confidence            99999999 99999999999986

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=7.9e-37  Score=330.10  Aligned_cols=254  Identities=37%  Similarity=0.631  Sum_probs=228.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      ++|+++|||++||+||+||||.+|+++.++.+++.++|+|+|++|+|+|++..... ++                     
T Consensus       163 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~  242 (482)
T PRK11241        163 ITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLM  242 (482)
T ss_pred             HHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999986543211 00                     


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|+|||+++||+|+++|+++++++++
T Consensus       243 ~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~----~ri~V~~~i~d~f~~~l~~~~~~l~~  318 (482)
T PRK11241        243 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA----NRLYVQDGVYDRFAEKLQQAVSKLHI  318 (482)
T ss_pred             HHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccC----eEEEEeHHHHHHHHHHHHHHHhhCCC
Confidence                                                       0456665    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++.+||++++.+++++.++|+++.++|+++++||..                                      
T Consensus       319 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~--------------------------------------  360 (482)
T PRK11241        319 GDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA--------------------------------------  360 (482)
T ss_pred             CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCC--------------------------------------
Confidence            999999999999999999999999888888888777777642                                      


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ...+|+|++|||
T Consensus       361 --------------------------------------------------------------------~~~~g~f~~Ptv  372 (482)
T PRK11241        361 --------------------------------------------------------------------HELGGNFFQPTI  372 (482)
T ss_pred             --------------------------------------------------------------------CCCCCeEEeeEE
Confidence                                                                                112479999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+||||......+.+||
T Consensus       373 l~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~Pf  452 (482)
T PRK11241        373 LVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPF  452 (482)
T ss_pred             EECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999976655667899


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|+||+|+++|.+++++|++.|+++.+
T Consensus       453 GG~k~SG~G~~~g~~g~~~ft~~k~v~~~  481 (482)
T PRK11241        453 GGIKASGLGREGSKYGIEDYLEIKYMCIG  481 (482)
T ss_pred             CCccccccCcccHHHHHHHhhcceEEEEe
Confidence            99999999999999999999999988653

>KOG2451|consensus

Probab=100.00  E-value=3.2e-37  Score=300.69  Aligned_cols=260  Identities=41%  Similarity=0.639  Sum_probs=231.1

Q ss_pred             CcccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCCh------------------------
Q psy1099           1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA------------------------   56 (605)
Q Consensus         1 ~~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~------------------------   56 (605)
                      ++.+|+++||++|||||+|||+.||++++.++++.++||+|+|++|+++++.....                        
T Consensus       175 MItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VG  254 (503)
T KOG2451|consen  175 MITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVG  254 (503)
T ss_pred             HHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHH
Confidence            35789999999999999999999999999999999999999999999997532211                        


Q ss_pred             --------hhhhhhcC-----Ccc---------------------------cccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          57 --------PYWRKSCL-----SPL---------------------------AYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        57 --------~~~~~~~~-----~~~---------------------------~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                              ..+++.|+     +|+                           ...+|+|||++|||+|++++.++++.+++
T Consensus       255 KiL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~v  334 (503)
T KOG2451|consen  255 KILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKV  334 (503)
T ss_pred             HHHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheec
Confidence                    01123232     110                           01289999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+.+++.+..||+|+..+.+++..++++|+.+|+++.+||+..                                     
T Consensus       335 GdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~-------------------------------------  377 (503)
T KOG2451|consen  335 GDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKER-------------------------------------  377 (503)
T ss_pred             cCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEc-------------------------------------
Confidence            9999999999999999999999999999888888888888741                                     


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          .+..++|+.|||
T Consensus       378 --------------------------------------------------------------------~~lg~~fyePTv  389 (503)
T KOG2451|consen  378 --------------------------------------------------------------------SELGPTFYEPTV  389 (503)
T ss_pred             --------------------------------------------------------------------cccCCccccceE
Confidence                                                                                122458899999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++.+|.+..||+|||+.+|++|+|+||+|+++|+++.||++|+||+|..+..+++++|+.|+|.+|..-......||
T Consensus       390 l~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pF  469 (503)
T KOG2451|consen  390 LSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPF  469 (503)
T ss_pred             eecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988888899999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|+||+|++++.+++++|+..|.++..
T Consensus       470 GGVKeSG~GREgskyGidey~~ik~icig  498 (503)
T KOG2451|consen  470 GGVKESGFGREGSKYGIDEYLVIKYICIG  498 (503)
T ss_pred             CCccccccCccccccchhhhhhhheeeec
Confidence            99999999999999999999999988765

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=3.5e-36  Score=317.34  Aligned_cols=174  Identities=51%  Similarity=0.742  Sum_probs=158.9

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDT  429 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~  429 (605)
                      ..++++.   .+++.+.+.++. +++|+++|+||+||+||++|+|++.|+          .|+.|++++++|||++++++
T Consensus       175 v~~tGs~---~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~  250 (367)
T cd06534         175 ISFTGST---AVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDE  250 (367)
T ss_pred             EEEECCH---HHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHH
Confidence            3567775   888888887776 799999999999999999999999986          35559999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccc
Q psy1099         430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR  509 (605)
Q Consensus       430 ~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~  509 (605)
                      |+++|+                                                            ||+.++++++++++
T Consensus       251 f~~~l~------------------------------------------------------------tl~~~~~~~~~~~~  270 (367)
T cd06534         251 FVEKLV------------------------------------------------------------TVLVDVDPDMPIAQ  270 (367)
T ss_pred             HHHhhc------------------------------------------------------------eeeeCCCCCCcccc
Confidence            999887                                                            77778888999999


Q ss_pred             cceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCCCCh
Q psy1099         510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGIGRE  581 (605)
Q Consensus       510 eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~G~~  581 (605)
                      ||+|||+++|++|++++||++++|+.++||+++|||+|.+.+++++.++++|.+.        .+..||||++.||+|++
T Consensus       271 ~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~  350 (367)
T cd06534         271 EEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGRE  350 (367)
T ss_pred             CCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCCC
Confidence            9999999999999999999999999999999999999999999999999999832        34689999999999999


Q ss_pred             hHHHHHHHhhhceEEE
Q psy1099         582 LGKAALDEYTELKTVT  597 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~  597 (605)
                      +|++++++||+.|+++
T Consensus       351 ~g~~~~~~~~~~k~i~  366 (367)
T cd06534         351 GGPYGLEEYTRTKTVV  366 (367)
T ss_pred             ChHHHHHHhceEEEEe
Confidence            9999999999999985

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=1e-36  Score=320.06  Aligned_cols=190  Identities=16%  Similarity=0.059  Sum_probs=145.3

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH---------hcccccccCeEEEecccHHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY---------YYCFVCAGSRTYVQEDIYDTF  430 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~---------~~~~c~a~~~v~v~~~~~~~~  430 (605)
                      .+||+++   .+|+.+.+.    ..+|+++|+|||||+||++|||++.|+         +|+.|++++|+|||++++|+|
T Consensus       189 v~fTGs~---~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~~GQ~C~a~~rv~V~~~v~d~f  261 (398)
T TIGR00407       189 LIPRGGN---GLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQRPSTCNAIETLLVNKAIAREF  261 (398)
T ss_pred             EEecCCH---HHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcCCCCcccccceEEEeHHHHHHH
Confidence            3567775   667665432    468999999999999999999999997         344499999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccccc
Q psy1099         431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIARE  510 (605)
Q Consensus       431 ~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~e  510 (605)
                      +++|++++.++.+        .+++      .+.+.+++..    |      |           ||++   ..++++++|
T Consensus       262 ~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----g------~-----------~tv~---~~~~~i~~e  303 (398)
T TIGR00407       262 LPVLENQLLEKGV--------TIHA------DAYALKLLEL----G------P-----------ATEA---IVCKTDFDK  303 (398)
T ss_pred             HHHHHHHHHhcCC--------EEec------CHHHHHHHhc----c------C-----------cccc---ccccccccc
Confidence            9999999987642        1222      1333333321    1      1           3544   233789999


Q ss_pred             ceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccCC-------CCcccccCC----CCCC
Q psy1099         511 EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKE----SGIG  579 (605)
Q Consensus       511 E~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~~-------~~PfGG~~~----SG~G  579 (605)
                      |+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.+++|       ..|||=-.+    ++-.
T Consensus       304 E~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~  383 (398)
T TIGR00407       304 EFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKL  383 (398)
T ss_pred             hhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCC
Confidence            99999999999999999999999999999999999999999999999999995443       235551111    1223


Q ss_pred             ChhHHHHHHHhhhce
Q psy1099         580 RELGKAALDEYTELK  594 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k  594 (605)
                      ...|+.+++.||..|
T Consensus       384 ~~rg~~~~~~~~~~~  398 (398)
T TIGR00407       384 HARGPMGLEALTSYK  398 (398)
T ss_pred             cCCCCcCHHHhcCCC
Confidence            446888999988765

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=1.5e-35  Score=317.65  Aligned_cols=250  Identities=25%  Similarity=0.379  Sum_probs=221.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.||+++.++++++.+ ++|+|++|+|+|+++....++                      
T Consensus       129 ~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~  207 (484)
T PLN02174        129 SIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-YLDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAA  207 (484)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHH
Confidence            578999999999999999999999999999999999 699999999998654321110                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++||+|++++.+++.++++|
T Consensus       208 aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~G  283 (484)
T PLN02174        208 AAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISP----DYILTTKEYAPKVIDAMKKELETFYGK  283 (484)
T ss_pred             HHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcC----cEEEEeHHHHHHHHHHHHHHHHhhcCC
Confidence                                                      1345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.+ ++.+||++++.+++++.++|+++ ++|+++.+||.                                        
T Consensus       284 ~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~----------------------------------------  321 (484)
T PLN02174        284 NPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGE----------------------------------------  321 (484)
T ss_pred             CCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCC----------------------------------------
Confidence            9987 89999999999999988888776 55666666553                                        


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                        . ...|+|++|||+
T Consensus       322 ------------------------------------------------------------------~-~~~g~~~~PTvl  334 (484)
T PLN02174        322 ------------------------------------------------------------------K-DRENLKIAPTIL  334 (484)
T ss_pred             ------------------------------------------------------------------c-CCCCCEEEEEEE
Confidence                                                                              2 124789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc--CCCCC
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV--VPQAP  335 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~p  335 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||.....  .+.+|
T Consensus       335 ~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~P  414 (484)
T PLN02174        335 LDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLP  414 (484)
T ss_pred             ecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999975433  36789


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|+||+|+++|.+++++|++.|+++..
T Consensus       415 fGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~  444 (484)
T PLN02174        415 FGGVGESGMGAYHGKFSFDAFSHKKAVLYR  444 (484)
T ss_pred             CCCcCccccCccchHHHHHHhcceEEEEEC
Confidence            999999999999999999999999998765

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=2e-35  Score=319.92  Aligned_cols=253  Identities=48%  Similarity=0.839  Sum_probs=228.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|++++++++++.++|+|+|++|+|+|++......                       
T Consensus       164 ~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  243 (486)
T cd07140         164 LAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM  243 (486)
T ss_pred             HHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999865432110                       


Q ss_pred             -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                             +                                    .|.|.++    +|++||+++|++|+++|++++++++
T Consensus       244 ~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~----~rl~V~~~i~~~f~~~l~~~~~~l~  319 (486)
T cd07140         244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAA----GRLFVEESIHDEFVRRVVEEVKKMK  319 (486)
T ss_pred             HHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCC----cEEEEcHHHHHHHHHHHHHHHHhCC
Confidence                   0                                    0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|++.++.+||++++.+++++.++|++++++|+++.+||..                                     
T Consensus       320 ~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~-------------------------------------  362 (486)
T cd07140         320 IGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQ-------------------------------------  362 (486)
T ss_pred             ccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------------------------------------
Confidence            9999999999999999999999999998888888887777642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ...+|+|++||
T Consensus       363 ---------------------------------------------------------------------~~~~g~~~~Pt  373 (486)
T cd07140         363 ---------------------------------------------------------------------VDRPGFFFEPT  373 (486)
T ss_pred             ---------------------------------------------------------------------CCCCCeeECCE
Confidence                                                                                 11257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecC--CHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ  333 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~--d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~  333 (605)
                      |+.+++++|++++||+||||++|++|+  |++|||+++|+++|||++||||+|.++++++++++++|.|+||..+...+.
T Consensus       374 vl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~  453 (486)
T cd07140         374 VFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVA  453 (486)
T ss_pred             EEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCC
Confidence            999999999999999999999999998  699999999999999999999999999999999999999999987766778


Q ss_pred             CCccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         334 APFGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      +||||+|+||+|+++|.+++++|++.|+++.
T Consensus       454 ~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~  484 (486)
T cd07140         454 APFGGFKQSGFGKDLGEEALNEYLKTKTVTI  484 (486)
T ss_pred             CCcCCcccCcCCCcchHHHHHHhhcEEEEEE
Confidence            9999999999999999999999999998864

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=2.4e-35  Score=320.38  Aligned_cols=254  Identities=56%  Similarity=0.985  Sum_probs=228.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      +++++++||++||+||+||||.+|+++.++++++.++|+|+|++|+|+|++.+....                       
T Consensus       175 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~  254 (501)
T PLN02766        175 FFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIM  254 (501)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999865432110                       


Q ss_pred             -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                             +                                    .|.|.++    +|+|||+++||+|+++++++++.++
T Consensus       255 ~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~----~ri~V~~si~d~f~~~l~~~~~~l~  330 (501)
T PLN02766        255 QAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVAS----SRVYVQEGIYDEFVKKLVEKAKDWV  330 (501)
T ss_pred             HHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCC----eEEEEcHHHHHHHHHHHHHHHHhcc
Confidence                   0                                    0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|+++++.+||+++..+++++.++|+++.++|+++.+||..                                     
T Consensus       331 ~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------------------------------------  373 (501)
T PLN02766        331 VGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKP-------------------------------------  373 (501)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc-------------------------------------
Confidence            9999999999999999999999988888887777777766642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       374 ---------------------------------------------------------------------~~~~g~~~~PT  384 (501)
T PLN02766        374 ---------------------------------------------------------------------CGDKGYYIEPT  384 (501)
T ss_pred             ---------------------------------------------------------------------CCCCCeEEeeE
Confidence                                                                                 11257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||......+.+|
T Consensus       385 vl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~P  464 (501)
T PLN02766        385 IFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCP  464 (501)
T ss_pred             EEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998777778899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|+||+|+++|.+++++|++.|+++..
T Consensus       465 fGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  494 (501)
T PLN02766        465 FGGYKMSGFGRDQGMDALDKYLQVKSVVTP  494 (501)
T ss_pred             cCCcccCcCCccchHHHHHHHhceEEEEEe
Confidence            999999999999999999999999988764

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=2.3e-35  Score=316.04  Aligned_cols=253  Identities=50%  Similarity=0.806  Sum_probs=225.9

Q ss_pred             CcccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh---------------------
Q psy1099           1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------   59 (605)
Q Consensus         1 ~~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------   59 (605)
                      +++||++|||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++......+                     
T Consensus       149 ~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i  228 (472)
T COG1012         149 LAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAI  228 (472)
T ss_pred             HHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHH
Confidence            46899999999999999999999999999999999999999999999999754221100                     


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    +|++||+++||+|++++.++.+.++
T Consensus       229 ~~~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~----~R~~V~~~v~d~f~~~l~~~~~~l~  304 (472)
T COG1012         229 AAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAA----SRLIVHESVYDEFVERLVARAASLK  304 (472)
T ss_pred             HHHHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCC----eEEEEehhhHHHHHHHHHHHHhcCC
Confidence                                                        1456666    9999999999999999999944489


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+++|+++++||+|++.+++++.++|+.+.++|+++..||+.                                     
T Consensus       305 ~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-------------------------------------  347 (472)
T COG1012         305 VGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-------------------------------------  347 (472)
T ss_pred             CCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-------------------------------------
Confidence            9998999999999999999999998888888877666666531                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                            .. |+|++||
T Consensus       348 ----------------------------------------------------------------------~~-g~~~~PT  356 (472)
T COG1012         348 ----------------------------------------------------------------------PG-GYFVEPT  356 (472)
T ss_pred             ----------------------------------------------------------------------CC-CeEECCE
Confidence                                                                                  12 7999999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQ  333 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~~~  333 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++++++++|+|+||.+.  ...+.
T Consensus       357 v~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~  436 (472)
T COG1012         357 ILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAY  436 (472)
T ss_pred             EEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999764  45678


Q ss_pred             CCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         334 APFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +||||+|+||+|+++|.+++++|++.|++...
T Consensus       437 ~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~  468 (472)
T COG1012         437 LPFGGVKQSGLGREGGKYGLEEFTEVKTVTIK  468 (472)
T ss_pred             CCCCCcccccCCccchHHHHHHHhcceEEEEe
Confidence            99999999999999999999999999988765

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=5.1e-35  Score=309.61  Aligned_cols=254  Identities=34%  Similarity=0.596  Sum_probs=227.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|++++++++++.++|+|+|++|+|+|++......+                      
T Consensus        88 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~  167 (409)
T PRK10090         88 IARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM  167 (409)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|+|||+++|++|+++++++++.+++
T Consensus       168 ~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~~  243 (409)
T PRK10090        168 AAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCA----ERVYVQKGIYDQFVNRLGEAMQAVQF  243 (409)
T ss_pred             HHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCC----eEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence                                                       1456665    99999999999999999999999999


Q ss_pred             CCCCCC-CCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          97 GDPFDK-SVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        97 g~~~~~-~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      |+|.+. ++.+||++++.+++++.++|+++.++|+++.+||..                                     
T Consensus       244 G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~-------------------------------------  286 (409)
T PRK10090        244 GNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKA-------------------------------------  286 (409)
T ss_pred             CCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCc-------------------------------------
Confidence            999998 999999999999999999888888888777777642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       287 ---------------------------------------------------------------------~~~~g~~~~Pt  297 (409)
T PRK10090        287 ---------------------------------------------------------------------VEGKGYYYPPT  297 (409)
T ss_pred             ---------------------------------------------------------------------CCCCCeEEecE
Confidence                                                                                 11247899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||......+..|
T Consensus       298 vl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~p  377 (409)
T PRK10090        298 LLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGF  377 (409)
T ss_pred             EEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997665556679


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|+||+|+++|.+++++|++.|+++..
T Consensus       378 fGG~k~SG~G~~~g~~gl~~f~~~k~v~~~  407 (409)
T PRK10090        378 HAGWRKSGIGGADGKHGLHEYLQTQVVYLQ  407 (409)
T ss_pred             cCCcccccCCccchHHHHHHhcceEEEEEe
Confidence            999999999999999999999999988653

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=4.9e-35  Score=316.02  Aligned_cols=252  Identities=36%  Similarity=0.638  Sum_probs=226.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|+++|||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|++......+                      
T Consensus       154 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~  232 (472)
T TIGR03374       154 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIL  232 (472)
T ss_pred             HHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            5789999999999999999999999999999999985 99999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++|++|+++|+++++++++
T Consensus       233 ~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~l~~  308 (472)
T TIGR03374       233 SHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAA----CRIYAQRGIYDTLVEKLGAAVATLKS  308 (472)
T ss_pred             HHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccC----CEEEEcHHHHHHHHHHHHHHHhcCCC
Confidence                                                       1456666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC-cEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG-GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G-~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      |+|.++++.+||+++..+++++.++|+.+.++| +++..||..                                     
T Consensus       309 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~-------------------------------------  351 (472)
T TIGR03374       309 GAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEK-------------------------------------  351 (472)
T ss_pred             CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCcc-------------------------------------
Confidence            999999999999999999999999998888877 577666642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|+.||
T Consensus       352 ---------------------------------------------------------------------~~~~g~~~~Pt  362 (472)
T TIGR03374       352 ---------------------------------------------------------------------RKGNGYYFAPT  362 (472)
T ss_pred             ---------------------------------------------------------------------CCCCCeEEeeE
Confidence                                                                                 11247899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||......+.+|
T Consensus       363 vl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~P  442 (472)
T TIGR03374       363 LLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMP  442 (472)
T ss_pred             EEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998666678899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |||+|.||+|+++|.+++++|++.|+++.
T Consensus       443 fGG~k~SG~G~~~g~~~l~~~t~~k~i~~  471 (472)
T TIGR03374       443 HGGQKLSGYGKDMSLYGLEDYTVVRHIMV  471 (472)
T ss_pred             CCCCccCccCccchHHHHHHhhceEEEEE
Confidence            99999999999999999999999998753

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=5.6e-35  Score=318.72  Aligned_cols=254  Identities=56%  Similarity=0.998  Sum_probs=229.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|+++|||++||+||+|||+.+|+++++++++|+++|+|+|++|+|+|++++....                       
T Consensus       212 ~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~  291 (538)
T PLN02466        212 FAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVL  291 (538)
T ss_pred             HHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999865432110                       


Q ss_pred             -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                             +                                    .|.|.++    +|++||+++||+|++++++++.+++
T Consensus       292 ~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~  367 (538)
T PLN02466        292 ELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAG----SRTFVHERVYDEFVEKAKARALKRV  367 (538)
T ss_pred             HHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcC----cEEEEcHHHHHHHHHHHHHHHHhcc
Confidence                   0                                    0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|++.++.+||+++..+++++.++|+++.++|+++.+||..                                     
T Consensus       368 vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~-------------------------------------  410 (538)
T PLN02466        368 VGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDR-------------------------------------  410 (538)
T ss_pred             CCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCc-------------------------------------
Confidence            9999999999999999999999998888888888777777642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           .+..++|++||
T Consensus       411 ---------------------------------------------------------------------~~~~g~~i~Pt  421 (538)
T PLN02466        411 ---------------------------------------------------------------------FGSKGYYIQPT  421 (538)
T ss_pred             ---------------------------------------------------------------------CCCCceEEEEE
Confidence                                                                                 11257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+|
T Consensus       422 vl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~P  501 (538)
T PLN02466        422 VFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIP  501 (538)
T ss_pred             EEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998777778899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+|+++|.+++++|++.|+++..
T Consensus       502 fGG~k~SG~G~~~G~~gl~~ft~~k~v~~~  531 (538)
T PLN02466        502 FGGYKMSGIGREKGIYSLNNYLQVKAVVTP  531 (538)
T ss_pred             cCCCCcCccCcccHHHHHHHhcceEEEEEe
Confidence            999999999999999999999999987654

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=7.2e-35  Score=316.57  Aligned_cols=253  Identities=63%  Similarity=1.079  Sum_probs=227.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++|.++|+|+|++|+|+|++.....                        
T Consensus       162 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~  241 (481)
T cd07141         162 AAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ  241 (481)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999986533210                        


Q ss_pred             ------hh------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          58 ------YW------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        58 ------~~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                            .+                                    .|.|.++    +|+|||+++||+|+++|++.++.++
T Consensus       242 ~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~  317 (481)
T cd07141         242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAG----SRTFVQESIYDEFVKRSVERAKKRV  317 (481)
T ss_pred             HHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCC----eEEEEcHHHHHHHHHHHHHHHHhCC
Confidence                  00                                    0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|+++++.+||++++.+++++.++|+++.++|+++.+||+.                                     
T Consensus       318 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~-------------------------------------  360 (481)
T cd07141         318 VGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKR-------------------------------------  360 (481)
T ss_pred             CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc-------------------------------------
Confidence            9999999999999999999999988888887777777776643                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       361 ---------------------------------------------------------------------~~~~g~~~~Pt  371 (481)
T cd07141         361 ---------------------------------------------------------------------HGDKGYFIQPT  371 (481)
T ss_pred             ---------------------------------------------------------------------CCCCCeEEeeE
Confidence                                                                                 12357899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+|
T Consensus       372 vl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~P  451 (481)
T cd07141         372 VFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAP  451 (481)
T ss_pred             EEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998777778899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |||+|.||+|+++|.+++++|++.|+++.
T Consensus       452 fGG~k~SG~G~~~g~~~~~~ft~~k~v~~  480 (481)
T cd07141         452 FGGYKMSGNGRELGEYGLQEYTEVKTVTI  480 (481)
T ss_pred             CCCcccCcCCccchHHHHHHHhheEEEEE
Confidence            99999999999999999999999998764

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=7.7e-35  Score=316.02  Aligned_cols=253  Identities=40%  Similarity=0.751  Sum_probs=228.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|+++.+..++                      
T Consensus       159 ~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~  238 (477)
T cd07113         159 AVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGR  238 (477)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998654221110                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++||+|+++++++++++++|
T Consensus       239 ~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g  314 (477)
T cd07113         239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAP----ERFYVHRSKFDELVTKLKQALSSFQVG  314 (477)
T ss_pred             HHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCC----cEEEECHHHHHHHHHHHHHHHHhCCCC
Confidence                                                      0346555    999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.+.++.+||+++..+++++.++|+.+.++|+++..||..                                       
T Consensus       315 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~---------------------------------------  355 (477)
T cd07113         315 SPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEA---------------------------------------  355 (477)
T ss_pred             CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCC---------------------------------------
Confidence            99999999999999999999998888888888777777642                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                         ....|+|+.|||+
T Consensus       356 -------------------------------------------------------------------~~~~g~~~~Ptvl  368 (477)
T cd07113         356 -------------------------------------------------------------------LAGEGYFVQPTLV  368 (477)
T ss_pred             -------------------------------------------------------------------CCCCCeeEeCEEE
Confidence                                                                               1124789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|||
T Consensus       369 ~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfG  448 (477)
T cd07113         369 LARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFG  448 (477)
T ss_pred             ecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999776667889999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |+|+||+|+++|.+++++|++.|+++.
T Consensus       449 G~k~SG~G~~~g~~~l~~~t~~k~v~~  475 (477)
T cd07113         449 GMKQSGIGREFGSAFIDDYTELKSVMI  475 (477)
T ss_pred             CCccccCCccchHHHHHHhhceEEEEE
Confidence            999999999999999999999998864

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=8.9e-35  Score=316.06  Aligned_cols=254  Identities=43%  Similarity=0.660  Sum_probs=228.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++.++|.++|+|+|++|+|+|+++.... ++                     
T Consensus       177 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~  256 (498)
T PLN02278        177 ITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM  256 (498)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999986543211 00                     


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|+|||+++|++|+++|++++.++++
T Consensus       257 ~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~~~f~~~L~~~~~~l~~  332 (498)
T PLN02278        257 AGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCA----NRILVQEGIYDKFAEAFSKAVQKLVV  332 (498)
T ss_pred             HHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCC----cEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||++++.+++++..+|+.+.++|+++.+||..                                      
T Consensus       333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~--------------------------------------  374 (498)
T PLN02278        333 GDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKR--------------------------------------  374 (498)
T ss_pred             CCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCcc--------------------------------------
Confidence            999999999999999999999999998888888887777642                                      


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ...+++|++|||
T Consensus       375 --------------------------------------------------------------------~~~~g~~~~Ptv  386 (498)
T PLN02278        375 --------------------------------------------------------------------HSLGGTFYEPTV  386 (498)
T ss_pred             --------------------------------------------------------------------CCCCCceEeeEE
Confidence                                                                                112478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       387 l~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~Pf  466 (498)
T PLN02278        387 LGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPF  466 (498)
T ss_pred             EecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999976555567899


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|.||+|+++|.+++++|++.|+++..
T Consensus       467 GG~k~SG~G~~~G~~~l~~ft~~k~i~~~  495 (498)
T PLN02278        467 GGVKQSGLGREGSKYGIDEYLEIKYVCLG  495 (498)
T ss_pred             CCcccCcCCccchHHHHHHhheeEEEEEe
Confidence            99999999999999999999999998754

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=5.6e-35  Score=314.88  Aligned_cols=249  Identities=45%  Similarity=0.682  Sum_probs=223.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCC-CCCChhhh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGY-GPMSAPYW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~-~~~~~~~~---------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++++++++|.++|+|+|++|+|+|+ +......+                     
T Consensus       134 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v  213 (448)
T TIGR01780       134 ITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKIL  213 (448)
T ss_pred             HHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence            46899999999999999999999999999999999999999999999986 43321100                     


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    +|+|||+++|++|+++|.+++++++
T Consensus       214 ~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~l~  289 (448)
T TIGR01780       214 MKQSASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCA----NRLYVHDGIYDEFAKKLAEAVKKLK  289 (448)
T ss_pred             HHHHhhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCC----ceeechHHHHHHHHHHHHHHHHhcC
Confidence                                                        0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.++++.+||++++.+++++.++|++++++|+++++||..                                     
T Consensus       290 ~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~-------------------------------------  332 (448)
T TIGR01780       290 VGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKR-------------------------------------  332 (448)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc-------------------------------------
Confidence            9999999999999999999999999998888888888777742                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       333 ---------------------------------------------------------------------~~~~g~~~~Pt  343 (448)
T TIGR01780       333 ---------------------------------------------------------------------HELGGNFFEPT  343 (448)
T ss_pred             ---------------------------------------------------------------------CCCCCeeEcCE
Confidence                                                                                 11247899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus       344 vl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~p  423 (448)
T TIGR01780       344 VLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAP  423 (448)
T ss_pred             EEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997666667889


Q ss_pred             ccccccCCCchHHhHHhhhccccee
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELK  360 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k  360 (605)
                      |||+|+||+|+++|.+++++|++.|
T Consensus       424 fGG~k~SG~G~~~g~~~~~~~~~~k  448 (448)
T TIGR01780       424 FGGVKQSGLGREGSKYGIEEYLETK  448 (448)
T ss_pred             CCCcccccCCccchHHHHHHHhccC
Confidence            9999999999999999999998754

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=1.4e-34  Score=315.04  Aligned_cols=257  Identities=33%  Similarity=0.494  Sum_probs=229.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|++++++++++.++|+|+|++|+|+|+++.+..++                      
T Consensus       266 ~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~  345 (604)
T PLN02419        266 PLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYA  345 (604)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998654321110                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|+|||++ |++|+++++++++++++|
T Consensus       346 ~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~----~Rv~V~~~-~d~f~e~l~~~~~~l~vG  420 (604)
T PLN02419        346 RAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMAL----STVVFVGD-AKSWEDKLVERAKALKVT  420 (604)
T ss_pred             HHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCC----CEEEEeCc-HHHHHHHHHHHHHHhccC
Confidence                                                      1456666    89999999 999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.++++++||++++.+++++..+|++|+++|+++++||....                                     
T Consensus       421 ~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~-------------------------------------  463 (604)
T PLN02419        421 CGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIV-------------------------------------  463 (604)
T ss_pred             CCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccc-------------------------------------
Confidence            9999999999999999999999999999999999988885310                                     


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                    .   .....|+|++|||+
T Consensus       464 --------------------------------------------------------------~---~~~~~G~f~~PTVL  478 (604)
T PLN02419        464 --------------------------------------------------------------V---PGYEKGNFIGPTIL  478 (604)
T ss_pred             --------------------------------------------------------------C---CCCCCCeEEeeEEE
Confidence                                                                          0   00125899999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC-CcCCCCCc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-AVVPQAPF  336 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~-~~~~~~pf  336 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||... ...+.+||
T Consensus       479 ~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PF  558 (604)
T PLN02419        479 SGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSF  558 (604)
T ss_pred             eCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999753 33578999


Q ss_pred             cccccCCCc--hHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIG--RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G--~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|.||+|  +++|.+++++|++.|+++..
T Consensus       559 GG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~  589 (604)
T PLN02419        559 TGNKASFAGDLNFYGKAGVDFFTQIKLVTQK  589 (604)
T ss_pred             CCcCcCCCCCCcccHHHHHHHhhCeEEEEEc
Confidence            999999999  79999999999999988765

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=1.3e-34  Score=314.00  Aligned_cols=256  Identities=45%  Similarity=0.790  Sum_probs=228.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|++.+....                       
T Consensus       153 ~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~  231 (480)
T cd07559         153 AAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIM  231 (480)
T ss_pred             HHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            5789999999999999999999999999999999996 9999999999865321110                       


Q ss_pred             --------------------------------h---------------hhhcCCcccccceeEeccccHHHHHHHHHHHH
Q psy1099          59 --------------------------------W---------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA   91 (605)
Q Consensus        59 --------------------------------~---------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~   91 (605)
                                                      +               .|.|.++    +|++||+++||+|++++++++
T Consensus       232 ~~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~  307 (480)
T cd07559         232 QYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCP----SRALVQESIYDEFIERAVERF  307 (480)
T ss_pred             HHHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCC----eEEEEcHHHHHHHHHHHHHHH
Confidence                                            0               0234444    899999999999999999999


Q ss_pred             hcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeE
Q psy1099          92 AARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT  171 (605)
Q Consensus        92 ~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~  171 (605)
                      +.+++|+|+++++.+||++++.+++++.++|+.+.++|+++.+||....                               
T Consensus       308 ~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-------------------------------  356 (480)
T cd07559         308 EAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLT-------------------------------  356 (480)
T ss_pred             HhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCc-------------------------------
Confidence            9999999999999999999999999999999999999999888885410                               


Q ss_pred             EEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCee
Q psy1099         172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYF  251 (605)
Q Consensus       172 ~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~  251 (605)
                                                                                             ......++|
T Consensus       357 -----------------------------------------------------------------------~~~~~~g~~  365 (480)
T cd07559         357 -----------------------------------------------------------------------LGGLDKGYF  365 (480)
T ss_pred             -----------------------------------------------------------------------cccCCCCcE
Confidence                                                                                   000125789


Q ss_pred             eeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcC
Q psy1099         252 IEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVV  331 (605)
Q Consensus       252 ~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~  331 (605)
                      ++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...
T Consensus       366 ~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~  445 (480)
T cd07559         366 YEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYP  445 (480)
T ss_pred             ECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999877777


Q ss_pred             CCCCccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         332 PQAPFGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       332 ~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      +.+||||+|+||+|+++|.+++++|++.|+++.
T Consensus       446 ~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~  478 (480)
T cd07559         446 AHAPFGGYKKSGIGRETHKMMLDHYQQTKNILV  478 (480)
T ss_pred             CCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence            889999999999999999999999999998765

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-34  Score=311.00  Aligned_cols=254  Identities=33%  Similarity=0.497  Sum_probs=228.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.++.+++.++|+|+|++|+|+|+++....++                      
T Consensus       143 ~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~  222 (462)
T PRK13968        143 VMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGA  222 (462)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998654321110                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|+|||+++|++|+++++++.+++++|
T Consensus       223 ~aa~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~~g  298 (462)
T PRK13968        223 QAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAA----KRFIIEEGIASAFTERFVAAAAALKMG  298 (462)
T ss_pred             HHhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCC----cEEEECHhHHHHHHHHHHHHHhcCCcC
Confidence                                                      1356565    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.+.++.+||+++..+++++..+++.++++|+++.+||..                                       
T Consensus       299 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~---------------------------------------  339 (462)
T PRK13968        299 DPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEK---------------------------------------  339 (462)
T ss_pred             CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc---------------------------------------
Confidence            99999999999999999999988888888877777776642                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                         ...+|+|++|||+
T Consensus       340 -------------------------------------------------------------------~~~~g~~~~Ptvl  352 (462)
T PRK13968        340 -------------------------------------------------------------------IAGAGNYYAPTVL  352 (462)
T ss_pred             -------------------------------------------------------------------CCCCceEECCEEE
Confidence                                                                               1124789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||......+.+|||
T Consensus       353 ~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfG  432 (462)
T PRK13968        353 ANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFG  432 (462)
T ss_pred             eCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876667889999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |+|.||+|+++|.+++++|++.|+++.+
T Consensus       433 G~k~SG~G~~~G~~~l~~ft~~k~v~~~  460 (462)
T PRK13968        433 GVKKSGFGRELSHFGLHEFCNIQTVWKD  460 (462)
T ss_pred             CccccccCcCchHHHHHHhcceeEEEEe
Confidence            9999999999999999999999988764

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=1.8e-34  Score=313.49  Aligned_cols=258  Identities=38%  Similarity=0.658  Sum_probs=230.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCC-Chhhh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPM-SAPYW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~-~~~~~---------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++.++|.++|+|+|++|+|+|++.. ....+                     
T Consensus       156 ~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i  235 (481)
T TIGR03216       156 MTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAI  235 (481)
T ss_pred             HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence            57899999999999999999999999999999999999999999999985431 11100                     


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    +|++||+++|++|++++++++++++
T Consensus       236 ~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~  311 (481)
T TIGR03216       236 MKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGT----ERVYVERPIFDRFVAALKARAESLK  311 (481)
T ss_pred             HHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----eEEEEcHHHHHHHHHHHHHHHHhcC
Confidence                                                        0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.++++.+||++++.+++++.++|+++.++|+++.+||..+.         .                         
T Consensus       312 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---------~-------------------------  357 (481)
T TIGR03216       312 IGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPD---------F-------------------------  357 (481)
T ss_pred             CCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccc---------c-------------------------
Confidence            999999999999999999999999999999999999988885310         0                         


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                         ......|+|++||
T Consensus       358 -------------------------------------------------------------------~~~~~~g~~~~PT  370 (481)
T TIGR03216       358 -------------------------------------------------------------------GDALAGGAWVQPT  370 (481)
T ss_pred             -------------------------------------------------------------------cccCCCCceEccE
Confidence                                                                               0001258999999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus       371 vl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~P  450 (481)
T TIGR03216       371 IWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTP  450 (481)
T ss_pred             EEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997666677899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |||+|+||+|+++|.+++++|++.|+++.
T Consensus       451 fGG~k~SG~G~~~g~~~l~~f~~~k~v~~  479 (481)
T TIGR03216       451 FGGSKLSGIGREGGVHSLEFYTELTNVCI  479 (481)
T ss_pred             cCCcccCcCCcCchHHHHHHhhceEEEEE
Confidence            99999999999999999999999998865

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=2.1e-34  Score=311.63  Aligned_cols=256  Identities=47%  Similarity=0.815  Sum_probs=229.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+|++......+                      
T Consensus       153 ~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~  231 (475)
T cd07117         153 AAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVA  231 (475)
T ss_pred             HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            5789999999999999999999999999999999985 99999999998653321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++++.+.++++
T Consensus       232 ~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~l~~  307 (475)
T cd07117         232 IAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAG----SRIFVQEGIYDEFVAKLKEKFENVKV  307 (475)
T ss_pred             HHHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCC----eEEEEeHHHHHHHHHHHHHHHHhccC
Confidence                                                       1456666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||+++..+++++.++|+.+.++|+++.+||.....                                   
T Consensus       308 g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~-----------------------------------  352 (475)
T cd07117         308 GNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTE-----------------------------------  352 (475)
T ss_pred             CCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcc-----------------------------------
Confidence            999999999999999999999999999999999988888753100                                   


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....++|++|||
T Consensus       353 -------------------------------------------------------------------~~~~~g~~~~Ptv  365 (475)
T cd07117         353 -------------------------------------------------------------------NGLDKGFFIEPTL  365 (475)
T ss_pred             -------------------------------------------------------------------ccCCCCeEEeeEE
Confidence                                                                               0012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+||
T Consensus       366 l~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~Pf  445 (475)
T cd07117         366 IVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPF  445 (475)
T ss_pred             eecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987777788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      ||+|+||+|+++|.+++++|++.|+++.
T Consensus       446 GG~k~SG~G~~~g~~~~~~ft~~k~v~~  473 (475)
T cd07117         446 GGYKKSGIGRETHKSMLDAYTQMKNIYI  473 (475)
T ss_pred             CCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence            9999999999999999999999998764

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=2.3e-34  Score=309.89  Aligned_cols=253  Identities=38%  Similarity=0.602  Sum_probs=227.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+++.+.+..++                      
T Consensus       140 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~  219 (457)
T PRK09406        140 VVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAA  219 (457)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999976433221110                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++||+|+++|+++++++++|
T Consensus       220 ~a~~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~l~~g  295 (457)
T PRK09406        220 IAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAA----KRFIVHADVYDAFAEKFVARMAALRVG  295 (457)
T ss_pred             HHHhcCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCC----eEEEEcHHHHHHHHHHHHHHHhhCCCC
Confidence                                                      0345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.++++.+||++++.+.+++.++|+.+.++|+++.+||..                                       
T Consensus       296 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~---------------------------------------  336 (457)
T PRK09406        296 DPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKR---------------------------------------  336 (457)
T ss_pred             CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCc---------------------------------------
Confidence            99999999999999999999998888888888777777642                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                         ....|+|++|||+
T Consensus       337 -------------------------------------------------------------------~~~~g~~~~Ptvl  349 (457)
T PRK09406        337 -------------------------------------------------------------------PDGPGWFYPPTVI  349 (457)
T ss_pred             -------------------------------------------------------------------CCCCCceEccEEe
Confidence                                                                               1125789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||......+.+|||
T Consensus       350 ~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfG  429 (457)
T PRK09406        350 TDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFG  429 (457)
T ss_pred             ecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876667889999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |+|.||+|+++|.+++++|++.|+++.
T Consensus       430 G~k~SG~G~~~g~~~l~~~t~~k~v~~  456 (457)
T PRK09406        430 GVKRSGYGRELSAHGIREFCNIKTVWI  456 (457)
T ss_pred             CccccccCccchHHHHHHhhceEEEEe
Confidence            999999999999999999999998753

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=2.8e-34  Score=310.35  Aligned_cols=256  Identities=42%  Similarity=0.700  Sum_probs=228.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|+++.... ++                     
T Consensus       133 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~  211 (456)
T cd07107         133 AAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIM  211 (456)
T ss_pred             HHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            5689999999999999999999999999999999995 999999999986543111 00                     


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    +|+|||+++||+|++++++++.+++
T Consensus       212 ~~aa~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~l~  287 (456)
T cd07107         212 RAAAEGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGST----SRLFVHESIYDEVLARVVERVAAIK  287 (456)
T ss_pred             HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCC----cEEEEcHHHHHHHHHHHHHHHHhCC
Confidence                                                        0334444    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.++++.+||++++.+++++.++|+++.++|+++.+||....                                   
T Consensus       288 ~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~-----------------------------------  332 (456)
T cd07107         288 VGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPE-----------------------------------  332 (456)
T ss_pred             CCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccc-----------------------------------
Confidence            999999999999999999999999999999888988888885310                                   


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                         ......|+|++||
T Consensus       333 -------------------------------------------------------------------~~~~~~g~~~~PT  345 (456)
T cd07107         333 -------------------------------------------------------------------GPALEGGFYVEPT  345 (456)
T ss_pred             -------------------------------------------------------------------cccCCCCceECCE
Confidence                                                                               0001257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||......+.+|
T Consensus       346 vl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~p  425 (456)
T cd07107         346 VFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAP  425 (456)
T ss_pred             EEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997666667899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |||+|+||+|+++|.+++++|++.|+++.
T Consensus       426 fgG~k~SG~G~~~g~~~~~~~~~~k~v~~  454 (456)
T cd07107         426 FGGVKNSGIGREECLEELLSYTQEKNVNV  454 (456)
T ss_pred             cCCcccccCCcCchHHHHHHhhceEEEEE
Confidence            99999999999999999999999998865

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=2.6e-34  Score=311.81  Aligned_cols=252  Identities=57%  Similarity=1.015  Sum_probs=227.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++++...                        
T Consensus       158 ~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~  237 (476)
T cd07142         158 FAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIM  237 (476)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999986543211                        


Q ss_pred             ------hh------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          58 ------YW------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        58 ------~~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                            .+                                    .|.|.++    +|++||+++||+|++++++++.+++
T Consensus       238 ~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~  313 (476)
T cd07142         238 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAG----SRTFVHESIYDEFVEKAKARALKRV  313 (476)
T ss_pred             HHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCC----eeEEEeHHHHHHHHHHHHHHHHhcC
Confidence                  00                                    0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.+.++.+||+++..+++++.++|+++.++|+++.+||..                                     
T Consensus       314 ~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~-------------------------------------  356 (476)
T cd07142         314 VGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDR-------------------------------------  356 (476)
T ss_pred             CCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCc-------------------------------------
Confidence            9999999999999999999999988888887777777776642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....++|++||
T Consensus       357 ---------------------------------------------------------------------~~~~g~~~~Pt  367 (476)
T cd07142         357 ---------------------------------------------------------------------IGSKGYYIQPT  367 (476)
T ss_pred             ---------------------------------------------------------------------CCCCCeeEccE
Confidence                                                                                 12257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+|
T Consensus       368 vl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~P  447 (476)
T cd07142         368 IFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIP  447 (476)
T ss_pred             EeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998777778899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|+||+|+++|.+++++|++.|+++
T Consensus       448 fGG~k~SG~G~~~g~~~~~~ft~~k~v~  475 (476)
T cd07142         448 FGGYKMSGIGREKGIYALNNYLQVKAVV  475 (476)
T ss_pred             CCCCccCcCCccchHHHHHHhhheeEEe
Confidence            9999999999999999999999999875

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=3.3e-34  Score=309.19  Aligned_cols=251  Identities=39%  Similarity=0.702  Sum_probs=225.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+++|+++.+++++++++ +|+|++|+++|+.+.+..++                      
T Consensus       131 ~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~  209 (446)
T cd07106         131 AAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMA  209 (446)
T ss_pred             HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh-CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            4789999999999999999999999999999999995 99999999998643211000                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++||+|+++|+++++++++|
T Consensus       210 ~aa~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~----~rv~V~~~v~d~f~~~l~~~~~~~~~G  285 (446)
T cd07106         210 SAAKTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAI----KRLYVHESIYDEFCEALVALAKAAVVG  285 (446)
T ss_pred             HHHhcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCC----cEEEEccccHHHHHHHHHHHHHhcCCC
Confidence                                                      0346555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.+.++.+||+++..+++++.++++.+.++|+++.+||..                                       
T Consensus       286 ~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~---------------------------------------  326 (446)
T cd07106         286 DGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEP---------------------------------------  326 (446)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc---------------------------------------
Confidence            99999999999999999999988888887777777777642                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                         ....|+|++|||+
T Consensus       327 -------------------------------------------------------------------~~~~g~~~~Ptvl  339 (446)
T cd07106         327 -------------------------------------------------------------------LDGPGYFIPPTIV  339 (446)
T ss_pred             -------------------------------------------------------------------CCCCCeeEcCEEE
Confidence                                                                               1125789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|||
T Consensus       340 ~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfG  419 (446)
T cd07106         340 DDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFG  419 (446)
T ss_pred             eCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999877777889999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEE
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |+|.||+|+++|.++++.|++.|+++
T Consensus       420 G~~~SG~G~~~g~~~~~~~t~~k~v~  445 (446)
T cd07106         420 GHKQSGIGVEFGIEGLKEYTQTQVIN  445 (446)
T ss_pred             CccccccCccchHHHHHHhhceeEEe
Confidence            99999999999999999999999875

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-34  Score=311.56  Aligned_cols=258  Identities=43%  Similarity=0.752  Sum_probs=230.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++|+++|+|+|++|+|+|+++.+..++                      
T Consensus       159 ~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~  238 (488)
T PRK13252        159 ACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMA  238 (488)
T ss_pred             HHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998654211100                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++|++|+++++++++++++|
T Consensus       239 ~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g  314 (488)
T PRK13252        239 AAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNG----TRVFVQKSIKAAFEARLLERVERIRIG  314 (488)
T ss_pred             HHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCC----eEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence                                                      0345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.++++.+||++++.+++++.++|+++.++|+++.+||....                                     
T Consensus       315 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-------------------------------------  357 (488)
T PRK13252        315 DPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLT-------------------------------------  357 (488)
T ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccc-------------------------------------
Confidence            9999999999999999999999999999888988888875310                                     


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                       ......|+|++|||+
T Consensus       358 -----------------------------------------------------------------~~~~~~g~~~~Ptvl  372 (488)
T PRK13252        358 -----------------------------------------------------------------EGGFANGAFVAPTVF  372 (488)
T ss_pred             -----------------------------------------------------------------cccCCCCeEEccEEe
Confidence                                                                             000125789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+|||
T Consensus       373 ~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfG  452 (488)
T PRK13252        373 TDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVG  452 (488)
T ss_pred             ccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876667789999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |+|.||+|+++|.+++++|++.|+++..
T Consensus       453 G~k~SG~G~~~g~~~~~~ft~~k~i~~~  480 (488)
T PRK13252        453 GYKQSGIGRENGIATLEHYTQIKSVQVE  480 (488)
T ss_pred             CCccCcCCcCChHHHHHHhcceEEEEEe
Confidence            9999999999999999999999998764

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-34  Score=310.67  Aligned_cols=253  Identities=36%  Similarity=0.648  Sum_probs=226.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|++......+                      
T Consensus       155 ~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~  233 (475)
T PRK13473        155 AAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVL  233 (475)
T ss_pred             HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            5789999999999999999999999999999999999 99999999998543211000                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|+++|+++++++++
T Consensus       234 ~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~l~~  309 (475)
T PRK13473        234 SAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAA----CRIYAQRGIYDDLVAKLAAAVATLKV  309 (475)
T ss_pred             HHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----eEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence                                                       1346555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC-cEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG-GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G-~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      |+|.++++.+||++++.+++++.++|+.+.++| +++.+||+.                                     
T Consensus       310 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~-------------------------------------  352 (475)
T PRK13473        310 GDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEA-------------------------------------  352 (475)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCc-------------------------------------
Confidence            999999999999999999999999888888777 777777653                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       353 ---------------------------------------------------------------------~~~~g~~~~Pt  363 (475)
T PRK13473        353 ---------------------------------------------------------------------PDGKGYYYEPT  363 (475)
T ss_pred             ---------------------------------------------------------------------CCCCceeEcCE
Confidence                                                                                 11247899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||......+.+|
T Consensus       364 vl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~P  443 (475)
T PRK13473        364 LLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMP  443 (475)
T ss_pred             EEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998666677899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|+||+|+++|.+++++|++.|+++..
T Consensus       444 fGG~k~SG~G~~~g~~~~~~~t~~k~i~~~  473 (475)
T PRK13473        444 HGGQKQSGYGKDMSLYGLEDYTVVRHVMVK  473 (475)
T ss_pred             CCCccccccCccchHHHHHHHhceEEEEEe
Confidence            999999999999999999999999988653

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=4.7e-34  Score=310.08  Aligned_cols=255  Identities=41%  Similarity=0.699  Sum_probs=226.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-h----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-Y----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+|.+..... +                      
T Consensus       153 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~  231 (479)
T cd07116         153 ATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIM  231 (479)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            4689999999999999999999999999999999998 999999999985432110 0                      


Q ss_pred             ---------------------------------h--------------hhhcCCcccccceeEeccccHHHHHHHHHHHH
Q psy1099          59 ---------------------------------W--------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA   91 (605)
Q Consensus        59 ---------------------------------~--------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~   91 (605)
                                                       +              .|.|.++    +|+|||+++||+|+++|++++
T Consensus       232 ~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~  307 (479)
T cd07116         232 QYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCP----SRALIQESIYDRFMERALERV  307 (479)
T ss_pred             HHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHhcCCCCCCCC----eEEEEcHHHHHHHHHHHHHHH
Confidence                                             0              0223333    899999999999999999999


Q ss_pred             hcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeE
Q psy1099          92 AARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT  171 (605)
Q Consensus        92 ~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~  171 (605)
                      +.+++|+|++.++.+||++++.+.+++.++|+++.++|+++..||.....                              
T Consensus       308 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~------------------------------  357 (479)
T cd07116         308 KAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNEL------------------------------  357 (479)
T ss_pred             HhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC------------------------------
Confidence            99999999999999999999999999999999999999988888753100                              


Q ss_pred             EEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCee
Q psy1099         172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYF  251 (605)
Q Consensus       172 ~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~  251 (605)
                                                                                              .....|+|
T Consensus       358 ------------------------------------------------------------------------~~~~~g~~  365 (479)
T cd07116         358 ------------------------------------------------------------------------GGLLGGGY  365 (479)
T ss_pred             ------------------------------------------------------------------------CCCCCCee
Confidence                                                                                    00125789


Q ss_pred             eeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcC
Q psy1099         252 IEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVV  331 (605)
Q Consensus       252 ~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~  331 (605)
                      +.||++.+++ ++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...
T Consensus       366 ~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~  444 (479)
T cd07116         366 YVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYP  444 (479)
T ss_pred             ecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCC
Confidence            9999999875 999999999999999999999999999999999999999999999999999999999999999877777


Q ss_pred             CCCCccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         332 PQAPFGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       332 ~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      +.+||||+|+||+|+++|.+++++|++.|+++.
T Consensus       445 ~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~  477 (479)
T cd07116         445 AHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV  477 (479)
T ss_pred             CCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence            789999999999999999999999999998764

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=7.8e-34  Score=306.76  Aligned_cols=253  Identities=37%  Similarity=0.567  Sum_probs=226.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+|+|++.+....+                      
T Consensus       135 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~~V~fTGs~~~g~~i~~~  214 (454)
T cd07101         135 AVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAER  214 (454)
T ss_pred             HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhCCCEEEEECCHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|+|||+++|++|+++|+++++.+++|+
T Consensus       215 aa~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~----~rv~V~~~i~d~f~~~L~~~~~~~~~G~  290 (454)
T cd07101         215 AGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSI----ERIYVHESVYDEFVRRFVARTRALRLGA  290 (454)
T ss_pred             HHhcCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccC----eEEEEcHHHHHHHHHHHHHHHhhCCCCC
Confidence                                                     1456666    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |++.++.+||++++.+++++..+++++.++|+++++||...                                       
T Consensus       291 ~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~---------------------------------------  331 (454)
T cd07101         291 ALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRAR---------------------------------------  331 (454)
T ss_pred             CCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCC---------------------------------------
Confidence            99999999999999999999999988888888887776420                                       


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                        ....++|++|||+.
T Consensus       332 ------------------------------------------------------------------~~~~~~~~~Ptvl~  345 (454)
T cd07101         332 ------------------------------------------------------------------PDLGPYFYEPTVLT  345 (454)
T ss_pred             ------------------------------------------------------------------CCCCCeEEcCEEEe
Confidence                                                                              01246899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC---cCCCCC
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA---VVPQAP  335 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~---~~~~~p  335 (605)
                      ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||....   ..+.+|
T Consensus       346 ~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~P  425 (454)
T cd07101         346 GVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAP  425 (454)
T ss_pred             CCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999996432   456789


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|.||+|+++|.+++++|++.|+++
T Consensus       426 fgG~k~SG~G~~~g~~~~~~~~~~k~v~  453 (454)
T cd07101         426 MGGMKDSGLGRRHGAEGLLKYTETQTVA  453 (454)
T ss_pred             CCcccccccCccchHHHHHHhcceEEEe
Confidence            9999999999999999999999999875

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=7.5e-34  Score=307.22  Aligned_cols=249  Identities=41%  Similarity=0.705  Sum_probs=222.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+++|+++.... ++                     
T Consensus       140 ~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~  219 (453)
T cd07094         140 VAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALR  219 (453)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999986544111 00                     


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +++|||+++|++|+++|+++.+++++|+
T Consensus       220 ~~a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~~i~V~~~i~d~f~~~L~~~~~~~~~g~  295 (453)
T cd07094         220 ANAGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISV----QRIYVHEELYDEFIEAFVAAVKKLKVGD  295 (453)
T ss_pred             HHcCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCC----eEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence                                                     0356665    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |.+.++.+||+++..+.+++.++++++.+.|+++..||.                                         
T Consensus       296 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~-----------------------------------------  334 (453)
T cd07094         296 PLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGE-----------------------------------------  334 (453)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCcc-----------------------------------------
Confidence            999999999999999988888888777776666655542                                         


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                       .   .++|++|||+.
T Consensus       335 -----------------------------------------------------------------~---~g~~~~Ptvl~  346 (453)
T cd07094         335 -----------------------------------------------------------------R---DGALFKPTVLE  346 (453)
T ss_pred             -----------------------------------------------------------------C---CCeEEeCEEEe
Confidence                                                                             1   36789999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCCCcc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFG  337 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfG  337 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..... .+.+|||
T Consensus       347 ~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfg  426 (453)
T cd07094         347 DVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFG  426 (453)
T ss_pred             CCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999976443 5789999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEE
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |+|+||+|+++|.+++++|++.|+++
T Consensus       427 G~~~SG~G~~~g~~~~~~~~~~k~i~  452 (453)
T cd07094         427 GVKESGVGREGVPYAMEEMTEEKTVV  452 (453)
T ss_pred             CccccccCcCChHHHHHHHhceeEEe
Confidence            99999999999999999999999875

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=9.3e-34  Score=303.74  Aligned_cols=252  Identities=39%  Similarity=0.610  Sum_probs=227.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.+|.++|.++|+|+|++|+|+|+++.+..++                      
T Consensus       113 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~  192 (429)
T cd07100         113 VFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAA  192 (429)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998654321110                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|+|||+++|++|+++++++.+.+++|
T Consensus       193 ~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~----~rv~v~~~i~~~f~~~l~~~~~~~~~g  268 (429)
T cd07100         193 EAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAA----KRFIVHEDVYDEFLEKFVEAMAALKVG  268 (429)
T ss_pred             HHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCC----eEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence                                                      0356665    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|++.++.+||+++..+++++.++|+.+.++|+++.+||..                                       
T Consensus       269 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~---------------------------------------  309 (429)
T cd07100         269 DPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKR---------------------------------------  309 (429)
T ss_pred             CCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc---------------------------------------
Confidence            99999999999999999999998888888777777776642                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                         ....|+|++|||+
T Consensus       310 -------------------------------------------------------------------~~~~g~~~~Ptv~  322 (429)
T cd07100         310 -------------------------------------------------------------------PDGPGAFYPPTVL  322 (429)
T ss_pred             -------------------------------------------------------------------CCCCCeEEcCEEe
Confidence                                                                               1124789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|.|+||......+.+|||
T Consensus       323 ~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfG  402 (429)
T cd07100         323 TDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFG  402 (429)
T ss_pred             ecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999877667889999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEE
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |+|.||+|+++|.+++++|++.|+++
T Consensus       403 G~~~SG~G~~~g~~~l~~~~~~k~v~  428 (429)
T cd07100         403 GVKRSGYGRELGRFGIREFVNIKTVW  428 (429)
T ss_pred             CccccccCCcchHHHHHHhcceeEEe
Confidence            99999999999999999999999864

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=9.5e-34  Score=304.92  Aligned_cols=255  Identities=34%  Similarity=0.552  Sum_probs=228.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHH-cCCCCccEEEecCCCCCChhhh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQ-AGFPDGVISVLPGYGPMSAPYW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~-aGlP~gvv~vv~g~~~~~~~~~---------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++++++++ +|+|+|++|+|+|++......+                     
T Consensus       134 ~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i  213 (455)
T cd07120         134 LVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAI  213 (455)
T ss_pred             HHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence            578999999999999999999999999999999999 7999999999998654321100                     


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    +|++||+++|++|++++++++++++
T Consensus       214 ~~~aa~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~l~  289 (455)
T cd07120         214 MAAAAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAG----SRVLVQRSIADEVRDRLAARLAAVK  289 (455)
T ss_pred             HHHHHhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCC----eEEEEcHHHHHHHHHHHHHHHHhcC
Confidence                                                        1345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.++++++||+++..+++++.++|+.+.+.|+++++||....                                   
T Consensus       290 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~-----------------------------------  334 (455)
T cd07120         290 VGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVT-----------------------------------  334 (455)
T ss_pred             cCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCc-----------------------------------
Confidence            999999999999999999999999999999888888888764210                                   


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                          .....++|++||
T Consensus       335 --------------------------------------------------------------------~~~~~g~~~~Pt  346 (455)
T cd07120         335 --------------------------------------------------------------------EGLAKGAFLRPT  346 (455)
T ss_pred             --------------------------------------------------------------------ccCCCCceECCE
Confidence                                                                                001257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..|
T Consensus       347 vl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~p  426 (455)
T cd07120         347 LLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAE  426 (455)
T ss_pred             EEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998776677899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|+||+|+++|.+++++|++.|+++
T Consensus       427 fGG~k~SG~G~~~g~~~l~~ft~~k~v~  454 (455)
T cd07120         427 EGGYRQSGLGRLHGVAALEDFIEYKHIY  454 (455)
T ss_pred             cCCccccccCccchHHHHHHHhceeEEe
Confidence            9999999999999999999999999875

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=1.1e-33  Score=305.97  Aligned_cols=250  Identities=35%  Similarity=0.583  Sum_probs=220.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|+|++.+... ++                     
T Consensus       156 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~  235 (472)
T TIGR03250       156 VAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIA  235 (472)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            56899999999999999999999999999999999999999999999986543211 00                     


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|+|||+++||+|+++|+++++.+++|+
T Consensus       236 ~~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~G~  311 (472)
T TIGR03250       236 ARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAV----KRMLVQESVADRFTELLVEKTRAWRYGD  311 (472)
T ss_pred             HHhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCC----cEEEEeHhHHHHHHHHHHHHHHhcCCCC
Confidence                                                     1356565    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |+++++.+||++++.+.+++.++++.++++|+++.+||.                                         
T Consensus       312 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~-----------------------------------------  350 (472)
T TIGR03250       312 PMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNV-----------------------------------------  350 (472)
T ss_pred             CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC-----------------------------------------
Confidence            999999999999999988888888777766666655542                                         


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                       .   .|+|++|||++
T Consensus       351 -----------------------------------------------------------------~---~g~~~~PTvl~  362 (472)
T TIGR03250       351 -----------------------------------------------------------------R---DGALYAPTVLD  362 (472)
T ss_pred             -----------------------------------------------------------------c---CCEEEcCEEEe
Confidence                                                                             1   37889999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCCCcc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFG  337 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfG  337 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..... .+.+|||
T Consensus       363 ~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfG  442 (472)
T TIGR03250       363 RVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFG  442 (472)
T ss_pred             CCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999965433 3568999


Q ss_pred             ccccCCCc-hHHhHHhhhcccceeEEEe
Q psy1099         338 GFKESGIG-RELGKAALDEYTELKTVTE  364 (605)
Q Consensus       338 G~~~SG~G-~~~G~~~~~~~~~~k~~t~  364 (605)
                      |+|+||+| +.+|.+++++|++.|+++.
T Consensus       443 G~k~SG~G~~~g~~~~l~~ft~~k~i~~  470 (472)
T TIGR03250       443 GIKDSGLGYKEGVQEAMKSFTNLKTYSL  470 (472)
T ss_pred             ccccccCCCCCChHHHHHHhhceEEEEE
Confidence            99999999 5677899999999998764

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=1.2e-33  Score=307.82  Aligned_cols=261  Identities=42%  Similarity=0.719  Sum_probs=231.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+|+|++......                       
T Consensus       152 ~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~  231 (488)
T TIGR02299       152 STWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIM  231 (488)
T ss_pred             HHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999865432110                       


Q ss_pred             ------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          59 ------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        59 ------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                            +                                    .|.|.++    +|++||+++||+|+++|+++++++++
T Consensus       232 ~~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~----~rv~V~~~v~d~f~~~l~~~~~~l~~  307 (488)
T TIGR02299       232 RNGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTAS----SRLLVQESIAEDFVEKLVERVRAIRV  307 (488)
T ss_pred             HHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCC----cEEEEcHHHHHHHHHHHHHHHhhCCc
Confidence                  0                                    0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++.+||++++.+++++.++|+++.+.|+++++||....        ..                          
T Consensus       308 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--------~~--------------------------  353 (488)
T TIGR02299       308 GHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAP--------TF--------------------------  353 (488)
T ss_pred             CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCc--------cc--------------------------
Confidence            99999999999999999999999999999999999998885410        00                          


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                     .+.  ....++|++|||
T Consensus       354 ---------------------------------------------------------------~~~--~~~~g~~~~Ptv  368 (488)
T TIGR02299       354 ---------------------------------------------------------------RGE--DLGRGNYVLPTV  368 (488)
T ss_pred             ---------------------------------------------------------------ccc--cCCCCeEEccEE
Confidence                                                                           000  012478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       369 l~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~Pf  448 (488)
T TIGR02299       369 FTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPF  448 (488)
T ss_pred             EecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999976666678999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|.||+|+++|.+++++|++.|+++..
T Consensus       449 GG~k~SG~G~~~g~~~~~~~~~~k~i~~~  477 (488)
T TIGR02299       449 GGVKASGIGREGGTYSFDFYTETKNVALA  477 (488)
T ss_pred             CCCccCcCCccchHHHHHHHhceEEEEEe
Confidence            99999999999999999999999998765

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=1.2e-33  Score=306.63  Aligned_cols=253  Identities=30%  Similarity=0.472  Sum_probs=222.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHH----HHHHHHHcCCCCccEEEecCCCCCChhhh------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALY----VAALTQQAGFPDGVISVLPGYGPMSAPYW------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~----l~~ll~~aGlP~gvv~vv~g~~~~~~~~~------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+    +.+++.++|+|+|++|+++|+.+.+..++                  
T Consensus       171 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~  250 (508)
T PLN02315        171 LGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGL  250 (508)
T ss_pred             HHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHH
Confidence            57899999999999999999999999887    67888999999999999998322211000                  


Q ss_pred             ----------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          60 ----------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        60 ----------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                                                                    .|.|.++    +|+|||+++||+|+++|++++++
T Consensus       251 ~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~  326 (508)
T PLN02315        251 MVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTC----RRLLLHESIYDDVLEQLLTVYKQ  326 (508)
T ss_pred             HHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCC----eEEEEeHHHHHHHHHHHHHHHHh
Confidence                                                          0345555    89999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|.+.++.+||+++..+.+++.++++.+.++|+++..||..                                   
T Consensus       327 l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~-----------------------------------  371 (508)
T PLN02315        327 VKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSA-----------------------------------  371 (508)
T ss_pred             cCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCc-----------------------------------
Confidence            999999999999999999999999999888888888777777642                                   


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                             ....|+|++
T Consensus       372 -----------------------------------------------------------------------~~~~g~~~~  380 (508)
T PLN02315        372 -----------------------------------------------------------------------IESEGNFVQ  380 (508)
T ss_pred             -----------------------------------------------------------------------CCCCCeEEe
Confidence                                                                                   112578999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHH--HhhcccEEEeccC-Cc
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAH--AINAGSVWINCYQ-AV  330 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~--~~~~g~v~iN~~~-~~  330 (605)
                      |||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++  ++++|+|+||..+ ..
T Consensus       381 Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~  459 (508)
T PLN02315        381 PTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGA  459 (508)
T ss_pred             cEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCC
Confidence            9999 599999999999999999999999999999999999999999999999999999985  7999999999744 33


Q ss_pred             CCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       331 ~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      .+.+||||+|.||+|+++|.+++++|++.|+++..
T Consensus       460 ~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  494 (508)
T PLN02315        460 EIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN  494 (508)
T ss_pred             CCCCCCCccccccCCccchHHHHHHHhhEEEEEEe
Confidence            57789999999999999999999999999988764

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=1.7e-33  Score=305.82  Aligned_cols=257  Identities=36%  Similarity=0.535  Sum_probs=227.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++|+++|+|+|++|+|+|+.+.+..++                      
T Consensus       153 ~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~  232 (478)
T cd07085         153 PLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYE  232 (478)
T ss_pred             HHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998543211100                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++|++|+++|+++.+++++|
T Consensus       233 ~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~~~f~~~L~~~~~~l~~G  308 (478)
T cd07085         233 RAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMAL----SVAVAVGDEADEWIPKLVERAKKLKVG  308 (478)
T ss_pred             HHhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----eEEEEeHHHHHHHHHHHHHHHHhCCCC
Confidence                                                      0345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.+.++.+||++++.+++++.++|+++.++|+++.+||....                                     
T Consensus       309 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~-------------------------------------  351 (478)
T cd07085         309 AGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVK-------------------------------------  351 (478)
T ss_pred             CCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC-------------------------------------
Confidence            9999999999999999999999999999999999988885310                                     


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                       .....+|+|++|||+
T Consensus       352 -----------------------------------------------------------------~~~~~~g~~~~Ptvl  366 (478)
T cd07085         352 -----------------------------------------------------------------VPGYENGNFVGPTIL  366 (478)
T ss_pred             -----------------------------------------------------------------CCcCCCCeEEcCEEE
Confidence                                                                             000125789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCCc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAPF  336 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pf  336 (605)
                      .++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+||
T Consensus       367 ~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~Pf  446 (478)
T cd07085         367 DNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSF  446 (478)
T ss_pred             ecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999997533 3467899


Q ss_pred             cccccCCCc--hHHhHHhhhcccceeEEEe
Q psy1099         337 GGFKESGIG--RELGKAALDEYTELKTVTE  364 (605)
Q Consensus       337 GG~~~SG~G--~~~G~~~~~~~~~~k~~t~  364 (605)
                      ||+|.||+|  +++|.+++++|++.|+++.
T Consensus       447 gG~k~SG~G~~~~~g~~~~~~~~~~k~v~~  476 (478)
T cd07085         447 GGWKGSFFGDLHFYGKDGVRFYTQTKTVTS  476 (478)
T ss_pred             CCcccccCCCCcCChHHHHHHhcceEEEEE
Confidence            999999999  4789999999999998864

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=2e-33  Score=304.56  Aligned_cols=253  Identities=54%  Similarity=0.967  Sum_probs=227.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+|+|++......                       
T Consensus       161 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~  240 (481)
T cd07143         161 CAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVM  240 (481)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHH
Confidence            478999999999999999999999999999999999999999999999865331100                       


Q ss_pred             -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                             +                                    .|.|.++    +|++||+++||+|++++++.+++++
T Consensus       241 ~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~  316 (481)
T cd07143         241 EAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAG----SRIYVQEGIYDKFVKRFKEKAKKLK  316 (481)
T ss_pred             HHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCC----cEEEEeHhHHHHHHHHHHHHHHhcC
Confidence                   0                                    0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.+.++.+||+++..+++++.++|+++.+.|+++..||..                                     
T Consensus       317 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~-------------------------------------  359 (481)
T cd07143         317 VGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKR-------------------------------------  359 (481)
T ss_pred             CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCC-------------------------------------
Confidence            9999999999999999999999888888877777777666642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....++|+.||
T Consensus       360 ---------------------------------------------------------------------~~~~g~~~~Pt  370 (481)
T cd07143         360 ---------------------------------------------------------------------HGNEGYFIEPT  370 (481)
T ss_pred             ---------------------------------------------------------------------CCCCceEEeeE
Confidence                                                                                 12257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+|
T Consensus       371 vl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~P  450 (481)
T cd07143         371 IFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVP  450 (481)
T ss_pred             EEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998777778899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |||+|.||+|+++|.++++.|++.|+++.
T Consensus       451 fGG~k~SG~G~~~G~~~l~~~t~~k~i~~  479 (481)
T cd07143         451 FGGYKQSGIGRELGEYALENYTQIKAVHI  479 (481)
T ss_pred             CCCccccccCcccHHHHHHHHhCeEEEEE
Confidence            99999999999999999999999998764

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=1.6e-33  Score=306.20  Aligned_cols=252  Identities=58%  Similarity=1.011  Sum_probs=226.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++++++|||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|++......                       
T Consensus       158 ~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~  237 (476)
T cd07091         158 LAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIM  237 (476)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999865421100                       


Q ss_pred             -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                             +                                    .|.|.++    ++++||+++|++|+++|++++++++
T Consensus       238 ~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~v~~~f~~~L~~~~~~~~  313 (476)
T cd07091         238 EAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAG----SRIFVQESIYDEFVEKFKARAEKRV  313 (476)
T ss_pred             HHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCC----cEEEEeHHHHHHHHHHHHHHHhhCC
Confidence                   0                                    0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.++++.+||+++..+++++.++|+++.++|+++.+||..                                     
T Consensus       314 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~-------------------------------------  356 (476)
T cd07091         314 VGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGER-------------------------------------  356 (476)
T ss_pred             CCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------------------------------------
Confidence            9999999999999999999998888888877777777776642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....++|++||
T Consensus       357 ---------------------------------------------------------------------~~~~~~~~~Pt  367 (476)
T cd07091         357 ---------------------------------------------------------------------HGSKGYFIQPT  367 (476)
T ss_pred             ---------------------------------------------------------------------CCCCCceECcE
Confidence                                                                                 12357899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+|
T Consensus       368 vl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p  447 (476)
T cd07091         368 VFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVP  447 (476)
T ss_pred             EecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998777778899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|.||+|+++|.+++++|++.|+++
T Consensus       448 fgG~k~SG~G~~~g~~~~~~f~~~k~~~  475 (476)
T cd07091         448 FGGFKQSGFGRELGEEGLEEYTQVKAVT  475 (476)
T ss_pred             cCCcccCcCCccchHHHHHHhhceeEEe
Confidence            9999999999999999999999999864

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-33  Score=305.37  Aligned_cols=252  Identities=36%  Similarity=0.675  Sum_probs=225.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ++|++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.....                        
T Consensus       174 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~  253 (494)
T PRK09847        174 TCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLL  253 (494)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999986432110                        


Q ss_pred             ------hh-------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099          58 ------YW-------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR   94 (605)
Q Consensus        58 ------~~-------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~   94 (605)
                            .+                                     .|.|.++    +|++||+++|++|+++|+++.+.+
T Consensus       254 ~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~  329 (494)
T PRK09847        254 KDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAG----TRLLLEESIADEFLALLKQQAQNW  329 (494)
T ss_pred             HHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCC----cEEEEcHHHHHHHHHHHHHHHHhc
Confidence                  00                                     0234444    899999999999999999999999


Q ss_pred             ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      ++|+|.++++.+||++++.+++++..+|+++.++| ++.+||..                                    
T Consensus       330 ~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~------------------------------------  372 (494)
T PRK09847        330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRN------------------------------------  372 (494)
T ss_pred             CCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCcc------------------------------------
Confidence            99999999999999999999999999998888887 77666642                                    


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                             ...++|++|
T Consensus       373 -----------------------------------------------------------------------~~~~~~~~P  381 (494)
T PRK09847        373 -----------------------------------------------------------------------AGLAAAIGP  381 (494)
T ss_pred             -----------------------------------------------------------------------CCCCceEee
Confidence                                                                                   013568999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA  334 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~  334 (605)
                      ||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||......+.+
T Consensus       382 tvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~  461 (494)
T PRK09847        382 TIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTV  461 (494)
T ss_pred             EEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999876667789


Q ss_pred             CccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         335 PFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||||+|.||+|+++|.++++.|++.|+++..
T Consensus       462 PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~  492 (494)
T PRK09847        462 PFGGYKQSGNGRDKSLHALEKFTELKTIWIS  492 (494)
T ss_pred             CcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence            9999999999999999999999999988653

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=1.6e-33  Score=304.71  Aligned_cols=254  Identities=47%  Similarity=0.831  Sum_probs=229.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|++++++++++.++|+|+|++|+|+|++++....+                      
T Consensus       137 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~  216 (456)
T cd07110         137 AAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVM  216 (456)
T ss_pred             HHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|+++|+++++++++
T Consensus       217 ~~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~  292 (456)
T cd07110         217 QAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSAT----SRLLVHESIADAFLERLATAAEAIRV  292 (456)
T ss_pred             HHHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----ceEEEcHHHHHHHHHHHHHHHHhcCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||++++.+++++.++++++.+.|+++.+||....                                    
T Consensus       293 g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~------------------------------------  336 (456)
T cd07110         293 GDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPA------------------------------------  336 (456)
T ss_pred             CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCccc------------------------------------
Confidence            99999999999999999999999999988888888888775310                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....++|+.|||
T Consensus       337 --------------------------------------------------------------------~~~~~~~~~Ptv  348 (456)
T cd07110         337 --------------------------------------------------------------------HLEKGYFIAPTV  348 (456)
T ss_pred             --------------------------------------------------------------------ccCCCCcCCCEE
Confidence                                                                                002578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+||
T Consensus       349 l~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~Pf  428 (456)
T cd07110         349 FADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPW  428 (456)
T ss_pred             EecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987666788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|+||+|+++|.+++++|++.|+++
T Consensus       429 GG~k~SG~G~~~g~~~l~~~~~~k~i~  455 (456)
T cd07110         429 GGYKRSGIGRELGEWGLDNYLEVKQIT  455 (456)
T ss_pred             CCcccccCCccchHHHHHHhcceeEEe
Confidence            999999999999999999999999875

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=1.8e-33  Score=303.55  Aligned_cols=250  Identities=31%  Similarity=0.518  Sum_probs=222.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|+|+.+.+..++                      
T Consensus       141 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~  220 (455)
T cd07148         141 IVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRS  220 (455)
T ss_pred             HHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998654321110                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|+|||+++||+|+++|+++..++++|+
T Consensus       221 ~aa~~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g~  296 (455)
T cd07148         221 KLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSV----QRVFVPAEIADDFAQRLAAAAEKLVVGD  296 (455)
T ss_pred             HhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCC----eEEEEcHhHHHHHHHHHHHHHhcCCCCC
Confidence                                                     0345555    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |++.++.+||++++.+++++.++|+++.++|+++.+||..                                        
T Consensus       297 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~----------------------------------------  336 (455)
T cd07148         297 PTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKR----------------------------------------  336 (455)
T ss_pred             CCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc----------------------------------------
Confidence            9999999999999999998888888877777776666532                                        


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                        .  .++|++|||+.
T Consensus       337 ------------------------------------------------------------------~--~~~~~~Ptvl~  348 (455)
T cd07148         337 ------------------------------------------------------------------L--SDTTYAPTVLL  348 (455)
T ss_pred             ------------------------------------------------------------------C--CCCeEcCEEEe
Confidence                                                                              1  25788999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCCCcc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFG  337 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfG  337 (605)
                      ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..... .+.+|||
T Consensus       349 ~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~Pfg  428 (455)
T cd07148         349 DPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFA  428 (455)
T ss_pred             CCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999975433 3568999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEE
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |+|.||+|+++|.+++++|++.|+++
T Consensus       429 G~k~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07148         429 GRRQSGYGTGGIPYTMHDMTQEKMAV  454 (455)
T ss_pred             cchhcccCCCchHHHHHHhhceeEEe
Confidence            99999999999999999999999874

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=2.1e-33  Score=305.63  Aligned_cols=258  Identities=45%  Similarity=0.760  Sum_probs=231.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++|.++|+|+|++|+|+|+++.... ++                     
T Consensus       151 ~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~  230 (482)
T cd07119         151 AAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIM  230 (482)
T ss_pred             HHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999986542111 00                     


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +++|||+++||+|+++|+++++++++
T Consensus       231 ~~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~i~d~f~~~l~~~~~~~~~  306 (482)
T cd07119         231 RAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAG----SRLLVEESIHDKFVAALAERAKKIKL  306 (482)
T ss_pred             HHHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----eEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||+++..+++++.++|+.+.++|+++.+||....                                    
T Consensus       307 G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------------------------------------  350 (482)
T cd07119         307 GNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPT------------------------------------  350 (482)
T ss_pred             CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccc------------------------------------
Confidence            99999999999999999999999999999989999888885310                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                        ......|+|++|||
T Consensus       351 ------------------------------------------------------------------~~~~~~g~~~~Ptv  364 (482)
T cd07119         351 ------------------------------------------------------------------GDELAKGYFVEPTI  364 (482)
T ss_pred             ------------------------------------------------------------------cccCCCCceECCEE
Confidence                                                                              00012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+||
T Consensus       365 l~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~Pf  444 (482)
T cd07119         365 FDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPW  444 (482)
T ss_pred             EecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987667788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|.||+|+++|.++++.|++.|+++..
T Consensus       445 GG~k~SG~G~~~G~~~l~~~t~~k~v~~~  473 (482)
T cd07119         445 GGYKQSGIGRELGPTGLEEYQETKHININ  473 (482)
T ss_pred             CCcccCcCCccchHHHHHHHhceEEEEEe
Confidence            99999999999999999999999988765

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=2.7e-33  Score=304.15  Aligned_cols=256  Identities=41%  Similarity=0.738  Sum_probs=230.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.+....+                      
T Consensus       168 ~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~  247 (503)
T PLN02467        168 ATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIM  247 (503)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|+++++++++++++
T Consensus       248 ~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~l~~  323 (503)
T PLN02467        248 TAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSAT----SRLLVHERIASEFLEKLVKWAKNIKI  323 (503)
T ss_pred             HHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCC----cEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||+++..+++++.++|+++.++|+++++||....                                    
T Consensus       324 g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~------------------------------------  367 (503)
T PLN02467        324 SDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPE------------------------------------  367 (503)
T ss_pred             CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC------------------------------------
Confidence            99999999999999999999999999988888888888775310                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       368 --------------------------------------------------------------------~~~~g~~~~Ptv  379 (503)
T PLN02467        368 --------------------------------------------------------------------HLKKGFFIEPTI  379 (503)
T ss_pred             --------------------------------------------------------------------CCCCCeEEeeEE
Confidence                                                                                012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||..+...+.+||
T Consensus       380 l~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~Pf  459 (503)
T PLN02467        380 ITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPW  459 (503)
T ss_pred             EeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999976656678999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|.||+|+++|.+++++|++.|+++..
T Consensus       460 GG~k~SG~G~~~G~~~l~~ft~~k~i~~~  488 (503)
T PLN02467        460 GGIKRSGFGRELGEWGLENYLSVKQVTKY  488 (503)
T ss_pred             CCcccCcCCCcchHHHHHHhhCeEEEEEe
Confidence            99999999999999999999999988775

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=2.2e-33  Score=304.16  Aligned_cols=252  Identities=31%  Similarity=0.510  Sum_probs=221.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHH----HHcCCCCccEEEecCCCCCChhhh------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALT----QQAGFPDGVISVLPGYGPMSAPYW------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~~~~~------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++    .++|+|+|++|+|+|+++.+..++                  
T Consensus       149 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~  228 (474)
T cd07130         149 WGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGR  228 (474)
T ss_pred             HHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHH
Confidence            4689999999999999999999999999887765    688999999999998654321100                  


Q ss_pred             ----------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          60 ----------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        60 ----------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                                                                    .|.|.++    +|+|||+++||+|+++|++++++
T Consensus       229 ~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~  304 (474)
T cd07130         229 QVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTT----RRLIVHESIYDEVLERLKKAYKQ  304 (474)
T ss_pred             HHHHHHHhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----eEEEEcHhHHHHHHHHHHHHHhc
Confidence                                                          0345555    89999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|++.++.+||++++.+++++.++|+++.++|+++.+||+..                                  
T Consensus       305 l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----------------------------------  350 (474)
T cd07130         305 VRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVI----------------------------------  350 (474)
T ss_pred             CCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcC----------------------------------
Confidence            9999999999999999999999999999988888888887777531                                  


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                              ..+|+|++
T Consensus       351 ------------------------------------------------------------------------~~~g~~~~  358 (474)
T cd07130         351 ------------------------------------------------------------------------DGPGNYVE  358 (474)
T ss_pred             ------------------------------------------------------------------------CCCCeEEc
Confidence                                                                                    12478999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHH--hhcccEEEeccC-Cc
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHA--INAGSVWINCYQ-AV  330 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~--~~~g~v~iN~~~-~~  330 (605)
                      |||+.++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++  +++|+|+||..+ ..
T Consensus       359 PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~  437 (474)
T cd07130         359 PTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGA  437 (474)
T ss_pred             cEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCC
Confidence            999998876 99999999999999999999999999999999999999999999999999987  999999999744 44


Q ss_pred             CCCCCccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       331 ~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      .+.+||||+|.||+|+++|.+++++|++.|+++.
T Consensus       438 ~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~  471 (474)
T cd07130         438 EIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTI  471 (474)
T ss_pred             CCCCCcCccccccCCccchHHHHHHHhheEEEEE
Confidence            5789999999999999999999999999998764

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=2.4e-33  Score=303.58  Aligned_cols=250  Identities=42%  Similarity=0.677  Sum_probs=221.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhH-HHHHHHHHHcCCCCccEEEecCCCCCChhhh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTA-LYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~-~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++ .++.+++.++|+|+|++|+|+|++......+                     
T Consensus       147 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i  226 (465)
T cd07151         147 SMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHI  226 (465)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHH
Confidence            468999999999999999999999996 7899999999999999999998643321100                     


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    +|++||+++|++|+++|++..++++
T Consensus       227 ~~~aa~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~  302 (465)
T cd07151         227 GELAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAI----NRIIVHEDVYDEFVEKFVERVKALP  302 (465)
T ss_pred             HHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----cEEEEeHHHHHHHHHHHHHHHHhCC
Confidence                                                        0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.+.++.+||++++.+++++.++++.+.++|+++.+||                                       
T Consensus       303 ~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg---------------------------------------  343 (465)
T cd07151         303 YGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGG---------------------------------------  343 (465)
T ss_pred             CCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecC---------------------------------------
Confidence            99999999999999999998888887777766666655554                                       


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                         ..   .++|++||
T Consensus       344 -------------------------------------------------------------------~~---~g~~~~Pt  353 (465)
T cd07151         344 -------------------------------------------------------------------EA---EGNVLEPT  353 (465)
T ss_pred             -------------------------------------------------------------------Cc---CCEEEccE
Confidence                                                                               21   36899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQA  334 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~  334 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..... .+.+
T Consensus       354 vl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~  433 (465)
T cd07151         354 VLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHV  433 (465)
T ss_pred             EEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999975443 4678


Q ss_pred             CccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         335 PFGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      ||||+|.||+|+++|.+++++|++.|+++.
T Consensus       434 PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~  463 (465)
T cd07151         434 PFGGEKNSGLGRFNGEWALEEFTTDKWISV  463 (465)
T ss_pred             CCCCcccccCCcCChHHHHHHhhceEEEEe
Confidence            999999999999999999999999998865

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=3e-33  Score=305.96  Aligned_cols=255  Identities=38%  Similarity=0.588  Sum_probs=227.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|+|++.+....+                      
T Consensus       171 ~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~~d~V~fTGs~~~g~~v~~~  250 (524)
T PRK09407        171 AVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQ  250 (524)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhcCCEEEEECCHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|++||+++|++|+++|+++++++++|+
T Consensus       251 aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~----~rv~V~~~v~d~f~~~L~~~~~~l~~G~  326 (524)
T PRK09407        251 AGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISI----ERIYVHESIYDEFVRAFVAAVRAMRLGA  326 (524)
T ss_pred             HHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----cEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence                                                     1346665    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |++.++.+||++++.+++++.++++++.++|+++.+||...                                       
T Consensus       327 ~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~---------------------------------------  367 (524)
T PRK09407        327 GYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKAR---------------------------------------  367 (524)
T ss_pred             CCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC---------------------------------------
Confidence            99999999999999999999999988888888887776420                                       


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                        ....++|++|||+.
T Consensus       368 ------------------------------------------------------------------~~~~g~~~~Ptvl~  381 (524)
T PRK09407        368 ------------------------------------------------------------------PDLGPLFYEPTVLT  381 (524)
T ss_pred             ------------------------------------------------------------------CCCCCceEeCEEEe
Confidence                                                                              01146899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC---cCCCCC
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA---VVPQAP  335 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~---~~~~~p  335 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||....   ..+.+|
T Consensus       382 ~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~P  461 (524)
T PRK09407        382 GVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAP  461 (524)
T ss_pred             CCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999996432   356789


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+|+++|.+++++|++.|+++..
T Consensus       462 fGG~k~SG~G~~~g~~~l~~ft~~k~v~~~  491 (524)
T PRK09407        462 MGGMKDSGLGRRHGAEGLLKYTESQTIATQ  491 (524)
T ss_pred             CCCccccccCccchHHHHHHhCCeEEEEEc
Confidence            999999999999999999999999998765

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=3e-33  Score=302.36  Aligned_cols=254  Identities=48%  Similarity=0.819  Sum_probs=228.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ++|++++||++||+||+|||+++|+++..+++++.++|+|+|++|+|+|++++...                        
T Consensus       141 ~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~  220 (462)
T cd07112         141 AAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFL  220 (462)
T ss_pred             HHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999986542110                        


Q ss_pred             ------hhh-------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099          58 ------YWR-------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR   94 (605)
Q Consensus        58 ------~~~-------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~   94 (605)
                            .+.                                     |.|.++    ++++||+++|++|+++|+++++++
T Consensus       221 ~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~v~~~f~~~l~~~~~~~  296 (462)
T cd07112         221 EYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAG----SRLLVHESIKDEFLEKVVAAAREW  296 (462)
T ss_pred             HHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCC----eeEEEcHHHHHHHHHHHHHHHhcC
Confidence                  000                                     234444    899999999999999999999999


Q ss_pred             ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      ++|+|+++++.+||++++.+++++.++|+.+.+.|+++.+||....                                  
T Consensus       297 ~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~----------------------------------  342 (462)
T cd07112         297 KPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVL----------------------------------  342 (462)
T ss_pred             CcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCC----------------------------------
Confidence            9999999999999999999999999999998888888887775310                                  


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                            ....|+|++|
T Consensus       343 ----------------------------------------------------------------------~~~~g~~~~P  352 (462)
T cd07112         343 ----------------------------------------------------------------------TETGGFFVEP  352 (462)
T ss_pred             ----------------------------------------------------------------------CCCCCeEEee
Confidence                                                                                  0124789999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA  334 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~  334 (605)
                      ||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+
T Consensus       353 tvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~  432 (462)
T cd07112         353 TVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITT  432 (462)
T ss_pred             EEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999877667889


Q ss_pred             CccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         335 PFGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||||+|.||+|+++|.+++++|++.|+++
T Consensus       433 PfgG~k~SG~G~~~g~~~~~~f~~~k~i~  461 (462)
T cd07112         433 PFGGFKQSGNGRDKSLHALDKYTELKTTW  461 (462)
T ss_pred             CCCCcccccCCccchHHHHHHHhceeEEE
Confidence            99999999999999999999999999874

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=2.5e-33  Score=305.05  Aligned_cols=256  Identities=50%  Similarity=0.874  Sum_probs=228.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++.++|.++|+|+|++|+|+|++.+....+                      
T Consensus       161 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~  240 (484)
T cd07144         161 AAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVM  240 (484)
T ss_pred             HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc-Cc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA-RK   95 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~-~~   95 (605)
                                                                 .|.|.++    +|++||+++||+|++++.+++.+ ++
T Consensus       241 ~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~  316 (484)
T cd07144         241 KAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTAT----SRIYVQESIYDKFVEKFVEHVKQNYK  316 (484)
T ss_pred             HHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----ceEEEcHHHHHHHHHHHHHHHHhhCC
Confidence                                                       0345555    89999999999999999999985 89


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|++.++++||+++..+++++.++|+.+.++|+++.+||....                                   
T Consensus       317 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-----------------------------------  361 (484)
T cd07144         317 VGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAP-----------------------------------  361 (484)
T ss_pred             cCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCc-----------------------------------
Confidence            999999999999999999999999999998888888888775310                                   


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                          .....|+|++||
T Consensus       362 --------------------------------------------------------------------~~~~~g~~~~Pt  373 (484)
T cd07144         362 --------------------------------------------------------------------EGLGKGYFIPPT  373 (484)
T ss_pred             --------------------------------------------------------------------ccCCCCceECCE
Confidence                                                                                001257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||......+.+|
T Consensus       374 vl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~P  453 (484)
T cd07144         374 IFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVP  453 (484)
T ss_pred             EEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998766677899


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |||+|+||+|+++|.++++.|++.|+++.
T Consensus       454 fGG~k~SG~G~~~g~~~l~~~t~~k~v~~  482 (484)
T cd07144         454 FGGFKMSGIGRELGEYGLETYTQTKAVHI  482 (484)
T ss_pred             cCCcccCcCCCCchHHHHHHhhceEEEEE
Confidence            99999999999999999999999998764

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=2.8e-33  Score=302.87  Aligned_cols=259  Identities=42%  Similarity=0.758  Sum_probs=230.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+|+|+++.+..++                      
T Consensus       133 ~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~  212 (457)
T cd07090         133 ASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMS  212 (457)
T ss_pred             HHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654211000                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++|++|+++++++++.+++|
T Consensus       213 ~aa~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g  288 (457)
T cd07090         213 AAAKGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNG----TRVFVQRSIKDEFTERLVERTKKIRIG  288 (457)
T ss_pred             HHhccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----eEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence                                                      0345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|+++++.+||++++.+++++.++|+++.+.|+++.+||.....                                    
T Consensus       289 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~------------------------------------  332 (457)
T cd07090         289 DPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVP------------------------------------  332 (457)
T ss_pred             CCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcc------------------------------------
Confidence            99999999999999999999999999998899998888853100                                    


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                       ......|+|++|||+
T Consensus       333 -----------------------------------------------------------------~~~~~~g~~~~Ptvl  347 (457)
T cd07090         333 -----------------------------------------------------------------EDGLENGFYVSPCVL  347 (457)
T ss_pred             -----------------------------------------------------------------cccCCCCeeECCEEE
Confidence                                                                             000125789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||..+...+.+|||
T Consensus       348 ~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfG  427 (457)
T cd07090         348 TDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFG  427 (457)
T ss_pred             ecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876667789999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |+|.||+|+++|.+++++|++.|+++..
T Consensus       428 G~k~SG~G~~~g~~~~~~f~~~k~~~~~  455 (457)
T cd07090         428 GYKQSGFGRENGTAALEHYTQLKTVYVE  455 (457)
T ss_pred             CCccCcCCccchHHHHHHHhCeEEEEEe
Confidence            9999999999999999999999988753

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=2.9e-33  Score=302.31  Aligned_cols=254  Identities=39%  Similarity=0.664  Sum_probs=229.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++.++|.++|+|+|++|+|+|+++.....+                      
T Consensus       140 ~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~  219 (459)
T cd07089         140 NLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIM  219 (459)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654311100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    ++++||+++|++|+++|+++++.+++
T Consensus       220 ~~aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~----~~v~V~~~v~~~f~~~l~~~~~~~~~  295 (459)
T cd07089         220 AQAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALT----TRLLVPRSRYDEVVEALAAAFEALPV  295 (459)
T ss_pred             HHHHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCC----eEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence                                                       1356555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+.++.+||+++..+.+++.++++.+.++|+++.+||....                                    
T Consensus       296 g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~------------------------------------  339 (459)
T cd07089         296 GDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPA------------------------------------  339 (459)
T ss_pred             CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC------------------------------------
Confidence            99999999999999999999999999988888888888875310                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       340 --------------------------------------------------------------------~~~~g~~~~Ptv  351 (459)
T cd07089         340 --------------------------------------------------------------------GLDKGFYVEPTL  351 (459)
T ss_pred             --------------------------------------------------------------------CCCCCeEECCEE
Confidence                                                                                012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+..||
T Consensus       352 l~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~Pf  431 (459)
T cd07089         352 FADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPF  431 (459)
T ss_pred             EEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987767788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.++++.|++.|+++
T Consensus       432 gG~k~SG~G~~~g~~~l~~ft~~k~v~  458 (459)
T cd07089         432 GGYKQSGLGRENGIEGLEEFLETKSIA  458 (459)
T ss_pred             CCcccccCCCCchHHHHHHhhceeEEe
Confidence            999999999999999999999999875

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=3.2e-33  Score=302.11  Aligned_cols=253  Identities=47%  Similarity=0.874  Sum_probs=227.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+++|+++..+.+++.++|+|+|++|+|+|++.+....+                      
T Consensus       134 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~  213 (453)
T cd07115         134 AAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIM  213 (453)
T ss_pred             HHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            4678999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    ++++||+++|++|+++|+++++++++
T Consensus       214 ~~aa~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~i~~~f~~~l~~~~~~~~~  289 (453)
T cd07115         214 QGAAGNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAG----SRLLVHESIYDEFLERFTSLARSLRP  289 (453)
T ss_pred             HHHhhcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCC----eEEEEcHHHHHHHHHHHHHHHhcCCc
Confidence                                                       0356665    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||++++.+++++.++|+.+.+.|+++.+||..                                      
T Consensus       290 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--------------------------------------  331 (453)
T cd07115         290 GDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKR--------------------------------------  331 (453)
T ss_pred             CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCC--------------------------------------
Confidence            999999999999999999999888888887777777666642                                      


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....++|++|||
T Consensus       332 --------------------------------------------------------------------~~~~g~~~~Ptv  343 (453)
T cd07115         332 --------------------------------------------------------------------PGARGFFVEPTI  343 (453)
T ss_pred             --------------------------------------------------------------------CCCCCceECCEE
Confidence                                                                                112478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||..+...+..||
T Consensus       344 l~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pf  423 (453)
T cd07115         344 FAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPF  423 (453)
T ss_pred             EecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987777788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      ||+|.||+|+++|.+++++|++.|+++.
T Consensus       424 GG~~~SG~G~~~g~~~~~~f~~~k~~~~  451 (453)
T cd07115         424 GGYKQSGFGREMGREALDEYTEVKSVWV  451 (453)
T ss_pred             CCcccccCCcCchHHHHHHhhceEEEEE
Confidence            9999999999999999999999998764

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=3e-33  Score=302.70  Aligned_cols=252  Identities=38%  Similarity=0.591  Sum_probs=226.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+|+|+++....++                      
T Consensus       136 ~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~  215 (453)
T cd07099         136 PMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAA  215 (453)
T ss_pred             HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998653211100                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    ++++||+++|++|+++|.++++++++|+
T Consensus       216 aa~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~----~ri~V~~~i~d~f~~~l~~~~~~l~~G~  291 (453)
T cd07099         216 AAERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISV----ERVYVHESVYDEFVARLVAKARALRPGA  291 (453)
T ss_pred             HHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----cEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence                                                     1456666    9999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |.++++.+||+++..+.+++.++++.+.++|+++..||..                                        
T Consensus       292 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~----------------------------------------  331 (453)
T cd07099         292 DDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGAR----------------------------------------  331 (453)
T ss_pred             CCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCc----------------------------------------
Confidence            9999999999999999999988888888777777766642                                        


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                        ....|+|++|||+.
T Consensus       332 ------------------------------------------------------------------~~~~g~~~~Ptil~  345 (453)
T cd07099         332 ------------------------------------------------------------------SNGGGPFYEPTVLT  345 (453)
T ss_pred             ------------------------------------------------------------------CCCCCeEEecEEEe
Confidence                                                                              11257899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--CCcCCCCCc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--QAVVPQAPF  336 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~~~~~~~pf  336 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..  +...+.+||
T Consensus       346 ~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~Pf  425 (453)
T cd07099         346 DVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPF  425 (453)
T ss_pred             cCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999965  344678999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.+++++|++.|+++
T Consensus       426 GG~~~SG~g~~~g~~~~~~~t~~k~v~  452 (453)
T cd07099         426 GGVKDSGGGRRHGAEGLREFCRPKAIA  452 (453)
T ss_pred             CCcccccCCccChHHHHHHhcceEEEe
Confidence            999999999999999999999999876

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=3.3e-33  Score=303.33  Aligned_cols=256  Identities=35%  Similarity=0.586  Sum_probs=228.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHc----CCCCccEEEecCCCCCChhhh------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGPMSAPYW------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~a----GlP~gvv~vv~g~~~~~~~~~------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++++    |+|+|++|+|+|+++....+.                  
T Consensus       150 ~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~  229 (478)
T cd07086         150 PGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGR  229 (478)
T ss_pred             HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHH
Confidence            5689999999999999999999999999999999999    999999999998654211000                  


Q ss_pred             ----------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          60 ----------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        60 ----------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                                                                    .|.|.++    +|++||+++||+|++++++++++
T Consensus       230 ~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~  305 (478)
T cd07086         230 RVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTT----RRLIVHESVYDEFLERLVKAYKQ  305 (478)
T ss_pred             HHHHHHhccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCC----eEEEEcHHHHHHHHHHHHHHHHh
Confidence                                                          0345555    89999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|.+.++.+||++++.+++++.++|+.+.+.|+++..||+...                                 
T Consensus       306 ~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---------------------------------  352 (478)
T cd07086         306 VRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRID---------------------------------  352 (478)
T ss_pred             CCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC---------------------------------
Confidence            99999999999999999999999999999999988888888875310                                 


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                             ....++|++
T Consensus       353 -----------------------------------------------------------------------~~~~g~~~~  361 (478)
T cd07086         353 -----------------------------------------------------------------------GGEPGNYVE  361 (478)
T ss_pred             -----------------------------------------------------------------------CCCCCeEEc
Confidence                                                                                   001478999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHH--hhcccEEEeccCC-c
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHA--INAGSVWINCYQA-V  330 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~--~~~g~v~iN~~~~-~  330 (605)
                      |||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++  +++|+|+||.... .
T Consensus       362 Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~  441 (478)
T cd07086         362 PTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGA  441 (478)
T ss_pred             cEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999  9999999997533 4


Q ss_pred             CCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       331 ~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      .+.+||||+|.||+|+++|.+++++|++.|+++..
T Consensus       442 ~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07086         442 EIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN  476 (478)
T ss_pred             CCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence            57889999999999999999999999999988753

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=3.4e-33  Score=303.15  Aligned_cols=254  Identities=44%  Similarity=0.712  Sum_probs=227.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++......+                      
T Consensus       152 ~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~  231 (473)
T cd07097         152 PAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIA  231 (473)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654221100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|+|||+++|++|+++|+++++.+++
T Consensus       232 ~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~  307 (473)
T cd07097         232 AAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTAS----SRLIVTEGIHDRFVEALVERTKALKV  307 (473)
T ss_pred             HHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCC----eeEEEehhHHHHHHHHHHHHHHhCCC
Confidence                                                       1356666    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||++++.+++++.++|+.+.++|+++.+||....                                    
T Consensus       308 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~------------------------------------  351 (473)
T cd07097         308 GDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLK------------------------------------  351 (473)
T ss_pred             CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC------------------------------------
Confidence            99999999999999999999999999998888888888774310                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       352 --------------------------------------------------------------------~~~~g~~~~Ptv  363 (473)
T cd07097         352 --------------------------------------------------------------------RPDEGYYLAPAL  363 (473)
T ss_pred             --------------------------------------------------------------------CCCCCeEEeeEE
Confidence                                                                                012478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAP  335 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~p  335 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||..+. ..+.+|
T Consensus       364 l~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~P  443 (473)
T cd07097         364 FAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVP  443 (473)
T ss_pred             eccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999996543 356899


Q ss_pred             ccccccCCCc-hHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIG-RELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G-~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|.||+| +++|.+++++|++.|++.
T Consensus       444 fGG~~~SG~G~~~~g~~~l~~f~~~k~v~  472 (473)
T cd07097         444 FGGRKGSSYGPREQGEAALEFYTTIKTVY  472 (473)
T ss_pred             CCCcccccCcccCCcHHHHHHhhceeEEe
Confidence            9999999999 899999999999999874

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=3.5e-33  Score=304.93  Aligned_cols=253  Identities=32%  Similarity=0.547  Sum_probs=222.3

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ++|+++||| +||+||+|||+++|+++.+++++|.++|+|+|++|+|+|++++...                        
T Consensus       187 ~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~  265 (522)
T cd07123         187 GNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLW  265 (522)
T ss_pred             HHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            568899999 6999999999999999999999999999999999999986542110                        


Q ss_pred             -----hhh------------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          58 -----YWR------------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        58 -----~~~------------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                           .+.                                          |.|.++    +|+|||+++||+|+++++++
T Consensus       266 ~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~----~rv~V~~~i~d~f~~~l~~~  341 (522)
T cd07123         266 KQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAA----SRAYVPESLWPEVKERLLEE  341 (522)
T ss_pred             HHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----cEEEEcHHHHHHHHHHHHHH
Confidence                 010                                          345555    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHc-CcEEEeCCcccCCCCccccceEeccCCCchhhhccccccce
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQ-GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV  169 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~-G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~  169 (605)
                      ++++++|+|.++++.+||+++..+++++.++|+++.++ |+++..||..                               
T Consensus       342 ~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~-------------------------------  390 (522)
T cd07123         342 LKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKC-------------------------------  390 (522)
T ss_pred             HhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCc-------------------------------
Confidence            99999999999999999999999999999998888887 7777777642                               


Q ss_pred             eEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCC
Q psy1099         170 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG  249 (605)
Q Consensus       170 ~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g  249 (605)
                                                                                                 ....|
T Consensus       391 ---------------------------------------------------------------------------~~~~g  395 (522)
T cd07123         391 ---------------------------------------------------------------------------DDSVG  395 (522)
T ss_pred             ---------------------------------------------------------------------------CCCCC
Confidence                                                                                       11247


Q ss_pred             eeeeeeEeeccCcchhhhhhhhcCceEEeEecCC--HHHHHHhhcCCC-cceeEEEecCChHHHHHHHHHh--hcccEEE
Q psy1099         250 YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTK-YGLASGIVTTNIDTANTFAHAI--NAGSVWI  324 (605)
Q Consensus       250 ~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~n~~~-~glaa~vft~d~~~~~~~~~~~--~~g~v~i  324 (605)
                      +|++|||+.+++++|++++||+||||++|++|+|  +||||+++|+++ |||++||||+|.+++.++++++  ++|+|+|
T Consensus       396 ~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~i  475 (522)
T cd07123         396 YFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYI  475 (522)
T ss_pred             ceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEE
Confidence            8999999999999999999999999999999994  799999999995 9999999999999999999997  4999999


Q ss_pred             eccC--CcCCCCCccccccCCCc-hHHhHHhhhcccceeEEEec
Q psy1099         325 NCYQ--AVVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       325 N~~~--~~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |...  ...+.+||||+|.||+| +++|.+++++|++.|+++..
T Consensus       476 N~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~  519 (522)
T cd07123         476 NDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKET  519 (522)
T ss_pred             CCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence            9643  33467899999999996 99999999999999988764

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=3.1e-33  Score=303.18  Aligned_cols=253  Identities=48%  Similarity=0.818  Sum_probs=226.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++|.++|+|+|++|+|+|++......+                      
T Consensus       150 ~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~  229 (467)
T TIGR01804       150 ASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIM  229 (467)
T ss_pred             HHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998643211100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++|++|+++|+++++++++
T Consensus       230 ~~a~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~  305 (467)
T TIGR01804       230 AAAADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNG----TRVFVHNKIKEKFEARLVERTKRIKL  305 (467)
T ss_pred             HHHHhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCC----CEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence                                                       0356555    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||+++..+.+++.++|+.+.++|+++.+||..+.                                    
T Consensus       306 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~------------------------------------  349 (467)
T TIGR01804       306 GDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPE------------------------------------  349 (467)
T ss_pred             CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccc------------------------------------
Confidence            99999999999999999999999999998888988888875310                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                        ......|+|++|||
T Consensus       350 ------------------------------------------------------------------~~~~~~g~~~~Ptv  363 (467)
T TIGR01804       350 ------------------------------------------------------------------REGLQNGFFIEPTV  363 (467)
T ss_pred             ------------------------------------------------------------------cccCCCCeEEeeEE
Confidence                                                                              00012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..+...+.+||
T Consensus       364 l~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pf  443 (467)
T TIGR01804       364 FTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPW  443 (467)
T ss_pred             EeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987766778999


Q ss_pred             cccccCCCchHHhHHhhhccccee
Q psy1099         337 GGFKESGIGRELGKAALDEYTELK  360 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k  360 (605)
                      ||+|+||+|+++|.+++++|++.|
T Consensus       444 GG~k~SG~G~~~g~~~~~~~~~~~  467 (467)
T TIGR01804       444 GGYKQSGIGRENGKAGLAEYTEVK  467 (467)
T ss_pred             CCcccCccCCCChHHHHHHHhccC
Confidence            999999999999999999998754

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-33  Score=303.42  Aligned_cols=250  Identities=31%  Similarity=0.464  Sum_probs=220.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++......+                      
T Consensus       175 ~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~g~~v~~  254 (496)
T PLN00412        175 AVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISK  254 (496)
T ss_pred             HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeChHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998643211100                      


Q ss_pred             ----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCCC
Q psy1099          60 ----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP   99 (605)
Q Consensus        60 ----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~~   99 (605)
                                                              .|.|.++    +|++||+++||+|+++++++++++++|+|
T Consensus       255 ~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  330 (496)
T PLN00412        255 KAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAV----KVVLVMESVADALVEKVNAKVAKLTVGPP  330 (496)
T ss_pred             HhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccC----eEEEEcHHHHHHHHHHHHHHHHhCccCCC
Confidence                                                    1345555    89999999999999999999999999999


Q ss_pred             CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCHH
Q psy1099         100 FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD  179 (605)
Q Consensus       100 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~  179 (605)
                      .+ ++.+||++++.+++++.++|+.+.+.|+++..+|                                           
T Consensus       331 ~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~-------------------------------------------  366 (496)
T PLN00412        331 ED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEW-------------------------------------------  366 (496)
T ss_pred             cc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecC-------------------------------------------
Confidence            77 8899999999998888887777766666654432                                           


Q ss_pred             HHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEeec
Q psy1099         180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN  259 (605)
Q Consensus       180 ~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~  259 (605)
                                                                                     .   ..|+|+.|||+.+
T Consensus       367 ---------------------------------------------------------------~---~~g~~~~Ptvl~~  380 (496)
T PLN00412        367 ---------------------------------------------------------------K---REGNLIWPLLLDN  380 (496)
T ss_pred             ---------------------------------------------------------------C---CCCeEEecEEEeC
Confidence                                                                           1   1478999999999


Q ss_pred             cCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC-CcCCCCCccc
Q psy1099         260 VTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-AVVPQAPFGG  338 (605)
Q Consensus       260 v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~-~~~~~~pfGG  338 (605)
                      +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||... ...+.+||||
T Consensus       381 v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG  460 (496)
T PLN00412        381 VRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQG  460 (496)
T ss_pred             CCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999764 3345789999


Q ss_pred             cccCCCchHHhHHhhhcccceeEEEec
Q psy1099         339 FKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       339 ~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +|.||+|+++|.++++.|++.|+++..
T Consensus       461 ~k~SG~G~~~g~~~~~~ft~~k~i~~~  487 (496)
T PLN00412        461 LKDSGIGSQGITNSINMMTKVKSTVIN  487 (496)
T ss_pred             ccccccCCCChHHHHHHhcceEEEEEe
Confidence            999999999999999999999988754

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=4e-33  Score=300.77  Aligned_cols=253  Identities=46%  Similarity=0.784  Sum_probs=227.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.+++++|+++|+|+|++|+|+|++......+                      
T Consensus       136 ~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  215 (454)
T cd07118         136 LSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIA  215 (454)
T ss_pred             HHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    ++++||+++||+|+++|+++++++++
T Consensus       216 ~~aa~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~L~~~~~~l~~  291 (454)
T cd07118         216 AAAARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSG----SRLLVHESIADAFVAAVVARSRKVRV  291 (454)
T ss_pred             HHHHhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCC----ceEEEcHHHHHHHHHHHHHHHHhcCc
Confidence                                                       0356555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++.+||++++.+.+++.++|+.+.++|+++.+||...                                     
T Consensus       292 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-------------------------------------  334 (454)
T cd07118         292 GDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERL-------------------------------------  334 (454)
T ss_pred             CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCC-------------------------------------
Confidence            9999999999999999999999999888887888877777531                                     


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       335 --------------------------------------------------------------------~~~~g~~~~Ptv  346 (454)
T cd07118         335 --------------------------------------------------------------------ASAAGLFYQPTI  346 (454)
T ss_pred             --------------------------------------------------------------------CCCCCeEEeCEE
Confidence                                                                                002578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||......+.+||
T Consensus       347 l~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~Pf  426 (454)
T cd07118         347 FTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPF  426 (454)
T ss_pred             EeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987667788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.++++.|++.|+++
T Consensus       427 gG~~~SG~G~~~g~~~l~~~t~~k~~~  453 (454)
T cd07118         427 GGFKQSGIGRELGRYGVEEYTELKTVH  453 (454)
T ss_pred             CCcccccCCcCchHHHHHHHhceeEEe
Confidence            999999999999999999999999864

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=3.4e-33  Score=301.07  Aligned_cols=249  Identities=37%  Similarity=0.607  Sum_probs=219.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhH-HHHHHHHHHcCCCCccEEEecCCCCCChhhh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTA-LYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~-~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------   59 (605)
                      ++|++++||++||+||+|||+++|+++ .++.++|.++|+|+|++|+|+|+.+.+..++                     
T Consensus       127 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~  206 (443)
T cd07152         127 AMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVG  206 (443)
T ss_pred             HHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            578999999999999999999999996 7899999999999999999998543211000                     


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++|++|+++++++++.+++
T Consensus       207 ~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~~  282 (443)
T cd07152         207 EAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAA----GRHLVHESVADAYTAKLAAKAKHLPV  282 (443)
T ss_pred             HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCC----eeEEEcHHHHHHHHHHHHHHHHhCCC
Confidence                                                       1356665    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+.++.+||+++..+++++.++|+.+.+.|+++..||.                                       
T Consensus       283 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~---------------------------------------  323 (443)
T cd07152         283 GDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGT---------------------------------------  323 (443)
T ss_pred             CCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccC---------------------------------------
Confidence            99999999999999999988888887777666666555542                                       


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .   .++|++|||
T Consensus       324 -------------------------------------------------------------------~---~g~~~~Ptv  333 (443)
T cd07152         324 -------------------------------------------------------------------Y---DGLFYRPTV  333 (443)
T ss_pred             -------------------------------------------------------------------c---CCEEEcCEE
Confidence                                                                               1   368999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCCC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAP  335 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~p  335 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||..... .+.+|
T Consensus       334 l~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~p  413 (443)
T cd07152         334 LSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNP  413 (443)
T ss_pred             EecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999965443 46799


Q ss_pred             ccccccCCCc-hHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIG-RELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G-~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|.||+| +++|.+++++|++.|+++
T Consensus       414 fGG~~~SG~G~~~~g~~~l~~~~~~k~~~  442 (443)
T cd07152         414 FGGMGASGNGSRFGGPANWEEFTQWQWVT  442 (443)
T ss_pred             CCCcccccCCCccCcHHHHHHhhceeEEe
Confidence            9999999999 888999999999999875

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=4e-33  Score=300.05  Aligned_cols=250  Identities=26%  Similarity=0.345  Sum_probs=217.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|+++.++.++++++ +|+|++|+|+|+.+.+..+                       
T Consensus       125 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~-lP~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~  203 (484)
T PLN02203        125 SLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY-LDSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTA  203 (484)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHH
Confidence            5689999999999999999999999999999999995 9999999999843211100                       


Q ss_pred             ----h----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099          59 ----W----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR   94 (605)
Q Consensus        59 ----~----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~   94 (605)
                          +                                        .|.|.++    +|++||+++|++|+++|++.+.++
T Consensus       204 aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~----~rv~V~~~i~d~f~~~L~~~~~~~  279 (484)
T PLN02203        204 AAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAI----DYVLVEERFAPILIELLKSTIKKF  279 (484)
T ss_pred             HHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccC----CeEEEcHHHHHHHHHHHHHHHHHh
Confidence                0                                        0223333    799999999999999999999999


Q ss_pred             ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      ++|+|.+. ..+||+++..+++++.++|+++.+. +++..||.                                     
T Consensus       280 ~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~-------------------------------------  320 (484)
T PLN02203        280 FGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGS-------------------------------------  320 (484)
T ss_pred             cCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCC-------------------------------------
Confidence            99999885 6899999999999998888877654 45555542                                     


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                           . ...++|++|
T Consensus       321 ---------------------------------------------------------------------~-~~~g~~i~P  330 (484)
T PLN02203        321 ---------------------------------------------------------------------I-DEKKLFIEP  330 (484)
T ss_pred             ---------------------------------------------------------------------c-CCCCCEEee
Confidence                                                                                 1 125789999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVP  332 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~~  332 (605)
                      ||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||...  ...+
T Consensus       331 Tvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~  410 (484)
T PLN02203        331 TILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACD  410 (484)
T ss_pred             EEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999753  3347


Q ss_pred             CCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         333 QAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       333 ~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      .+||||+|+||+|+++|.+++++|++.|+++..
T Consensus       411 ~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~  443 (484)
T PLN02203        411 SLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRR  443 (484)
T ss_pred             CCCCCCcCcccCCccccHHHHHHhcceeEEEEc
Confidence            789999999999999999999999999998766

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=4.3e-33  Score=301.43  Aligned_cols=255  Identities=35%  Similarity=0.511  Sum_probs=228.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.+|.++|+++|+|+|++|+|+|+++.+..++                      
T Consensus       133 ~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~  212 (452)
T cd07102         133 AVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQR  212 (452)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999999998653321100                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    ++++||+++|++|+++|++...++++|
T Consensus       213 ~a~~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~v~~~f~~~L~~~~~~l~vg  288 (452)
T cd07102         213 AAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSI----ERIYVHESIYDAFVEAFVAVVKGYKLG  288 (452)
T ss_pred             HHHhcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCC----cEEEEeHHHHHHHHHHHHHHHHhccCC
Confidence                                                      0345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.+.++.+||+++..+++++.++++.++++|+++++||....                                     
T Consensus       289 ~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~-------------------------------------  331 (452)
T cd07102         289 DPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFP-------------------------------------  331 (452)
T ss_pred             CCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCC-------------------------------------
Confidence            9999999999999999999999999998888888888875310                                     


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                        .....++|++|||+
T Consensus       332 ------------------------------------------------------------------~~~~~g~~~~Ptvl  345 (452)
T cd07102         332 ------------------------------------------------------------------EDKAGGAYLAPTVL  345 (452)
T ss_pred             ------------------------------------------------------------------CCCCCCceEcCEEE
Confidence                                                                              00125789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||......+..|||
T Consensus       346 ~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfg  425 (452)
T cd07102         346 TNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWT  425 (452)
T ss_pred             ecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876667789999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEE
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |+|+||+|+++|.+++++|++.|+++
T Consensus       426 G~k~SG~G~~~g~~~~~~~~~~k~~~  451 (452)
T cd07102         426 GVKDSGRGVTLSRLGYDQLTRPKSYH  451 (452)
T ss_pred             CccccccCccchHHHHHHHhceeEEe
Confidence            99999999999999999999999875

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=3.5e-33  Score=310.93  Aligned_cols=254  Identities=25%  Similarity=0.388  Sum_probs=222.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcC-CCCccEEEecCCCCCC------------------------h
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPGYGPMS------------------------A   56 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aG-lP~gvv~vv~g~~~~~------------------------~   56 (605)
                      ++|+++|||++||+||+|||+.+|++++++++++.++| +|+|++|+|+|+....                        .
T Consensus       161 ~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~~~~~~~~~~~~V~FTGS~~~G~~i~~~  240 (663)
T TIGR02278       161 LLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAGDLLDHLDHRDVVAFTGSAATADRLRAH  240 (663)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHhcCCCCCEEEEECCHHHHHHHHHh
Confidence            57899999999999999999999999999999999999 9999999999842110                        0


Q ss_pred             ----h---------------------h-----h---------------hhhcCCcccccceeEeccccHHHHHHHHHHHH
Q psy1099          57 ----P---------------------Y-----W---------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA   91 (605)
Q Consensus        57 ----~---------------------~-----~---------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~   91 (605)
                          .                     .     +               .|.|.++    +|+|||+++||+|++++++++
T Consensus       241 aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~----~rv~V~~~i~d~f~~~l~~~~  316 (663)
T TIGR02278       241 PNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAI----RRVIVPKALLEAVLKALQARL  316 (663)
T ss_pred             HhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCC----ceEEEeHHHHHHHHHHHHHHH
Confidence                0                     0     1               1345555    899999999999999999999


Q ss_pred             hcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeE
Q psy1099          92 AARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT  171 (605)
Q Consensus        92 ~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~  171 (605)
                      .++++|+|.+.++.+||+|++.+++++.++|+.|+++|+++.+||..                                 
T Consensus       317 ~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~---------------------------------  363 (663)
T TIGR02278       317 AKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPG---------------------------------  363 (663)
T ss_pred             HhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---------------------------------
Confidence            99999999999999999999999999999888888888777777642                                 


Q ss_pred             EEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCee
Q psy1099         172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYF  251 (605)
Q Consensus       172 ~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~  251 (605)
                                                                                               . ..|+|
T Consensus       364 -------------------------------------------------------------------------~-~~g~~  369 (663)
T TIGR02278       364 -------------------------------------------------------------------------R-LDGAF  369 (663)
T ss_pred             -------------------------------------------------------------------------C-CCCee
Confidence                                                                                     1 14789


Q ss_pred             eeeeEeeccCcch-hhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHh--hcccEEE-ecc
Q psy1099         252 IEPTVFSNVTDDF-KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI--NAGSVWI-NCY  327 (605)
Q Consensus       252 ~~Ptvl~~v~~~~-~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~--~~g~v~i-N~~  327 (605)
                      ++|||+.+++++| ++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++|  ++|+|+| |..
T Consensus       370 ~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~  449 (663)
T TIGR02278       370 FPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRD  449 (663)
T ss_pred             EccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCc
Confidence            9999999999886 89999999999999999999999999999999999999999999999999999  7999999 641


Q ss_pred             -------C-CcCCCCCccccccCCCchHH-hHHhhhcccceeEEEecC
Q psy1099         328 -------Q-AVVPQAPFGGFKESGIGREL-GKAALDEYTELKTVTESP  366 (605)
Q Consensus       328 -------~-~~~~~~pfGG~~~SG~G~~~-G~~~~~~~~~~k~~t~s~  366 (605)
                             . ...+.+||||+|+||+|++. |.+++++|++.|+++.+|
T Consensus       450 ~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~~~  497 (663)
T TIGR02278       450 DAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQGSP  497 (663)
T ss_pred             ccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEcCH
Confidence                   1 12357899999999999994 679999999999999886

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=4.2e-33  Score=301.30  Aligned_cols=249  Identities=37%  Similarity=0.661  Sum_probs=221.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.+++++|+++|+|+|++|+++|+.+.+..++                      
T Consensus       140 ~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~  219 (452)
T cd07147         140 VAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKA  219 (452)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            5688999999999999999999999999999999999999999999998654321110                      


Q ss_pred             ----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCCC
Q psy1099          60 ----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP   99 (605)
Q Consensus        60 ----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~~   99 (605)
                                                              .|.|.++    ++++||+++|++|+++|+++.+.+++|+|
T Consensus       220 ~a~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~i~d~f~~~L~~~~~~~~~g~p  295 (452)
T cd07147         220 RAGKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISV----QRVLVHRSVYDEFKSRLVARVKALKTGDP  295 (452)
T ss_pred             HhCcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCC----cEEEEchhHHHHHHHHHHHHHHhCCCCCC
Confidence                                                    0345555    89999999999999999999999999999


Q ss_pred             CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCHH
Q psy1099         100 FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD  179 (605)
Q Consensus       100 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~  179 (605)
                      .+.++.+||+++..+.+++.++++.+.++|+++..||.                                          
T Consensus       296 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~------------------------------------------  333 (452)
T cd07147         296 KDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK------------------------------------------  333 (452)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCC------------------------------------------
Confidence            99999999999999988888887777666666555542                                          


Q ss_pred             HHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEeec
Q psy1099         180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN  259 (605)
Q Consensus       180 ~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~  259 (605)
                                                                                      .   .|+|++|||+.+
T Consensus       334 ----------------------------------------------------------------~---~g~~~~Ptvl~~  346 (452)
T cd07147         334 ----------------------------------------------------------------R---DGALLEPTILED  346 (452)
T ss_pred             ----------------------------------------------------------------c---CCEEEcCEEEeC
Confidence                                                                            2   368999999999


Q ss_pred             cCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCCccc
Q psy1099         260 VTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAPFGG  338 (605)
Q Consensus       260 v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGG  338 (605)
                      +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+||||
T Consensus       347 ~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG  426 (452)
T cd07147         347 VPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGG  426 (452)
T ss_pred             CCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999996543 346789999


Q ss_pred             cccCCCchHHhHHhhhcccceeEEE
Q psy1099         339 FKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       339 ~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      +|.||+|+++|.+++++|++.|+++
T Consensus       427 ~~~SG~G~~~g~~~~~~~~~~k~i~  451 (452)
T cd07147         427 VKDSGIGREGVRYAIEEMTEPRLLV  451 (452)
T ss_pred             ccccccCCCChHHHHHHhcceeEEe
Confidence            9999999999999999999999875

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=4.2e-33  Score=304.06  Aligned_cols=254  Identities=30%  Similarity=0.492  Sum_probs=222.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ..|++++|| +||+||+|||+++|+++.+++++|+++|+|+|++|+|+|++.....                        
T Consensus       187 ~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~  265 (533)
T TIGR01236       187 GNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW  265 (533)
T ss_pred             HHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            467889999 8999999999999999999999999999999999999986432110                        


Q ss_pred             -----hh------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          58 -----YW------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        58 -----~~------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                           .+                                          .|.|.++    +|+|||+++|++|+++|+++
T Consensus       266 ~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~  341 (533)
T TIGR01236       266 KWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAA----SRLYVPHSVWPRFKDELLAE  341 (533)
T ss_pred             HHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCC----eeEEEchhHHHHHHHHHHHH
Confidence                 00                                          0345555    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC--cEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG--GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP  168 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G--~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp  168 (605)
                      ++++++|+|.++++.+||+++..+++++.++|+.+.++|  +++++||..                              
T Consensus       342 ~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~------------------------------  391 (533)
T TIGR01236       342 LAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKY------------------------------  391 (533)
T ss_pred             HhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCc------------------------------
Confidence            999999999999999999999999999999988887775  566666532                              


Q ss_pred             eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099         169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK  248 (605)
Q Consensus       169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~  248 (605)
                                                                                                  ....
T Consensus       392 ----------------------------------------------------------------------------~~~~  395 (533)
T TIGR01236       392 ----------------------------------------------------------------------------DDSE  395 (533)
T ss_pred             ----------------------------------------------------------------------------CCCC
Confidence                                                                                        1125


Q ss_pred             CeeeeeeEeeccCcchhhhhhhhcCceEEeEecCC--HHHHHHhh-cCCCcceeEEEecCChHHHHHHHHHhh--cccEE
Q psy1099         249 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERA-NDTKYGLASGIVTTNIDTANTFAHAIN--AGSVW  323 (605)
Q Consensus       249 g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~-n~~~~glaa~vft~d~~~~~~~~~~~~--~g~v~  323 (605)
                      |+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||++||||+|.+++.+++++++  +|+|+
T Consensus       396 G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~  475 (533)
T TIGR01236       396 GYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFY  475 (533)
T ss_pred             CeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEE
Confidence            79999999999999999999999999999999998  49999999 899999999999999999999999977  99999


Q ss_pred             Eecc--CCcCCCCCccccccCCCc-hHHhHHhhhcccceeEEEecC
Q psy1099         324 INCY--QAVVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       324 iN~~--~~~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ||..  +...+.+||||+|.||+| +++|.+++++|++.|+++..+
T Consensus       476 IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~  521 (533)
T TIGR01236       476 INDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETF  521 (533)
T ss_pred             ECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEc
Confidence            9954  333468899999999998 899999999999999887663

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=3.6e-33  Score=298.18  Aligned_cols=248  Identities=28%  Similarity=0.405  Sum_probs=217.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++|+++ +|+|++|+|+|+.+.+..++                      
T Consensus       118 ~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~~v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~  196 (432)
T cd07137         118 SLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAA  196 (432)
T ss_pred             HHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHH
Confidence            5789999999999999999999999999999999995 99999999998543211100                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++||+|++++++++..+++|
T Consensus       197 aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g  272 (432)
T cd07137         197 AAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAP----DYVLVEESFAPTLIDALKNTLEKFFGE  272 (432)
T ss_pred             HHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCC----CEEEEcHHHHHHHHHHHHHHHHHHhCC
Confidence                                                      1345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +| +.++.+||+++..+++++.++|+++.+ |++++.||..                                       
T Consensus       273 ~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~---------------------------------------  311 (432)
T cd07137         273 NP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER---------------------------------------  311 (432)
T ss_pred             CC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc---------------------------------------
Confidence            99 568999999999999988888887776 6666665531                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                          ...++|++|||+
T Consensus       312 --------------------------------------------------------------------~~~g~~~~Ptvl  323 (432)
T cd07137         312 --------------------------------------------------------------------DEKNLYIEPTIL  323 (432)
T ss_pred             --------------------------------------------------------------------CCCCCEEeeEEE
Confidence                                                                                124789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC--cCCCCC
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA--VVPQAP  335 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~p  335 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||....  ..+.+|
T Consensus       324 ~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~P  403 (432)
T cd07137         324 LDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLP  403 (432)
T ss_pred             ecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999997543  347889


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|.||+|+++|.+++++|++.|+++
T Consensus       404 fGG~k~SG~G~~~g~~~l~~f~~~k~v~  431 (432)
T cd07137         404 FGGVGESGFGAYHGKFSFDAFSHKKAVL  431 (432)
T ss_pred             CCCcCcCcCCccccHHHHHHhccCceee
Confidence            9999999999999999999999998764

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=5.9e-33  Score=301.55  Aligned_cols=253  Identities=41%  Similarity=0.706  Sum_probs=226.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+|+|+.+....++                      
T Consensus       154 ~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~  233 (471)
T cd07139         154 AALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAA  233 (471)
T ss_pred             HHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998533211000                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    ++++||+++|++|+++|+++++++++|
T Consensus       234 ~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~i~d~f~~~l~~~~~~~~~g  309 (471)
T cd07139         234 VCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVAL----TRILVPRSRYDEVVEALAAAVAALKVG  309 (471)
T ss_pred             HHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----cEEEEeHhHHHHHHHHHHHHHHhCCcC
Confidence                                                      0345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.+.++.+||+++..+++++.++|+.+.++|+++++||..+.                                     
T Consensus       310 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-------------------------------------  352 (471)
T cd07139         310 DPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPA-------------------------------------  352 (471)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC-------------------------------------
Confidence            9999999999999999999999999888888888887775310                                     


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                         ....++|++|||+
T Consensus       353 -------------------------------------------------------------------~~~~~~~~~Ptvl  365 (471)
T cd07139         353 -------------------------------------------------------------------GLDRGWFVEPTLF  365 (471)
T ss_pred             -------------------------------------------------------------------CCCCCeEEccEEE
Confidence                                                                               0024789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||... ..+.+|||
T Consensus       366 ~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~Pfg  444 (471)
T cd07139         366 ADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFG  444 (471)
T ss_pred             ecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999755 56789999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEE
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |+|.||+|+++|.+++++|++.|+++
T Consensus       445 G~k~SG~G~~~g~~~~~~ft~~k~i~  470 (471)
T cd07139         445 GFKQSGIGREGGPEGLDAYLETKSIY  470 (471)
T ss_pred             CcccccCCccchHHHHHHHhceeEEe
Confidence            99999999999999999999999875

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=6.5e-33  Score=300.08  Aligned_cols=255  Identities=42%  Similarity=0.702  Sum_probs=225.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      +++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+|++......                       
T Consensus       134 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~  212 (457)
T cd07108         134 AALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIY  212 (457)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence            4678999999999999999999999999999999996 9999999999864321100                       


Q ss_pred             ------h-------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          59 ------W-------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 ------~-------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                            +                                     .|.|.++    +|++||+++|++|+++|++++..++
T Consensus       213 ~~aa~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~  288 (457)
T cd07108         213 RAAADRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAG----SRLFVHEDIYDAFLEKLVAKLSKLK  288 (457)
T ss_pred             HHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCC----eEEEEehHHHHHHHHHHHHHHhhCC
Confidence                  0                                     0334444    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHH-cCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~-~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      +|+|.+.++.+||++++.+.+++.++|+.+.+ +|+++.+||..+..                                 
T Consensus       289 vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~---------------------------------  335 (457)
T cd07108         289 IGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGE---------------------------------  335 (457)
T ss_pred             CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCcc---------------------------------
Confidence            99999999999999999999999999999888 88888888754100                                 


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                           .....++|++|
T Consensus       336 ---------------------------------------------------------------------~~~~~g~~~~P  346 (457)
T cd07108         336 ---------------------------------------------------------------------GPLADGFFVQP  346 (457)
T ss_pred             ---------------------------------------------------------------------CCCCCceEECC
Confidence                                                                                 00135789999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA  334 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~  334 (605)
                      ||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+
T Consensus       347 tvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~  426 (457)
T cd07108         347 TIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQ  426 (457)
T ss_pred             EEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999876667789


Q ss_pred             CccccccCCCchHHhHHh-hhcccceeEEE
Q psy1099         335 PFGGFKESGIGRELGKAA-LDEYTELKTVT  363 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~-~~~~~~~k~~t  363 (605)
                      ||||+|.||+|+++|.+. +++|++.|+++
T Consensus       427 pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~  456 (457)
T cd07108         427 SYGGFKQSGLGREASLEGMLEHFTQKKTVN  456 (457)
T ss_pred             CcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence            999999999999999855 68999999875

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=7.5e-33  Score=298.14  Aligned_cols=249  Identities=37%  Similarity=0.610  Sum_probs=221.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++.++++++|+|+|++|+++|++......+                      
T Consensus       137 ~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~  216 (451)
T cd07146         137 VAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIA  216 (451)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654311100                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|+|||+++|++|+++++++.+.+++|+
T Consensus       217 ~~a~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~l~~g~  292 (451)
T cd07146         217 ATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAV----KRILVHESVADEFVDLLVEKSAALVVGD  292 (451)
T ss_pred             HHhcCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCC----ceEEEchHHHHHHHHHHHHHHhcCCCCC
Confidence                                                     1356665    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |.++++.+||++++.+++++.++++.+.++|+++.+||.                                         
T Consensus       293 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~-----------------------------------------  331 (451)
T cd07146         293 PMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQ-----------------------------------------  331 (451)
T ss_pred             CCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCC-----------------------------------------
Confidence            999999999999999988888888777766666655542                                         


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                       .   .|+|++|||+.
T Consensus       332 -----------------------------------------------------------------~---~g~~~~Ptvl~  343 (451)
T cd07146         332 -----------------------------------------------------------------R---QGALYAPTVLD  343 (451)
T ss_pred             -----------------------------------------------------------------c---CCEEEcCEEee
Confidence                                                                             1   36889999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC-CcCCCCCcc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-AVVPQAPFG  337 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~-~~~~~~pfG  337 (605)
                      ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||... ...+.+|||
T Consensus       344 ~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfG  423 (451)
T cd07146         344 HVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFG  423 (451)
T ss_pred             cCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999743 334678999


Q ss_pred             ccccCCC-chHHhHHhhhcccceeEEE
Q psy1099         338 GFKESGI-GRELGKAALDEYTELKTVT  363 (605)
Q Consensus       338 G~~~SG~-G~~~G~~~~~~~~~~k~~t  363 (605)
                      |+|.||+ |+++|.+++++|++.|+++
T Consensus       424 G~k~SG~~g~~~g~~~~~~f~~~k~~~  450 (451)
T cd07146         424 GVKDSGLGGKEGVREAMKEMTNVKTYS  450 (451)
T ss_pred             cccccCCCcccChHHHHHHHhceeEEe
Confidence            9999995 8999999999999999875

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=4.7e-33  Score=300.93  Aligned_cols=250  Identities=40%  Similarity=0.669  Sum_probs=223.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|+|+++....++                      
T Consensus       164 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~  243 (480)
T cd07111         164 LAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRR  243 (480)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654211000                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++|++|+++++++++.+++|
T Consensus       244 ~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~----~ri~V~~~i~d~f~~~l~~~~~~~~vg  319 (480)
T cd07111         244 ATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAG----SRLLVQESVAEELIRKLKERMSHLRVG  319 (480)
T ss_pred             HHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCC----ceEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence                                                      0345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|+++++.+||++++.+++++.++|+.+.+.|+++..||..                                       
T Consensus       320 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~---------------------------------------  360 (480)
T cd07111         320 DPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGAD---------------------------------------  360 (480)
T ss_pred             CCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCc---------------------------------------
Confidence            99999999999999999999988888887777776666532                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                         ....|+|++|||+
T Consensus       361 -------------------------------------------------------------------~~~~g~~~~Ptvl  373 (480)
T cd07111         361 -------------------------------------------------------------------LPSKGPFYPPTLF  373 (480)
T ss_pred             -------------------------------------------------------------------CCCCCeEEeeEEE
Confidence                                                                               1125789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||......+.+|||
T Consensus       374 ~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfG  453 (480)
T cd07111         374 TNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFG  453 (480)
T ss_pred             ecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876667789999


Q ss_pred             ccccCCCchHHhHHhhhcccceeE
Q psy1099         338 GFKESGIGRELGKAALDEYTELKT  361 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~  361 (605)
                      |+|.||+|+++|.+++++|++.|+
T Consensus       454 G~k~SG~G~~~g~~~~~~~~~~k~  477 (480)
T cd07111         454 GYRESGFGREGGKEGLYEYLRPSW  477 (480)
T ss_pred             CcccccCCccchHHHHHHHhhccC
Confidence            999999999999999999988774

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=7.6e-33  Score=299.43  Aligned_cols=250  Identities=42%  Similarity=0.678  Sum_probs=223.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|+|++......+                      
T Consensus       140 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~  219 (456)
T cd07145         140 FAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIA  219 (456)
T ss_pred             HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++|++|+++|+++++.+++
T Consensus       220 ~~aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~  295 (456)
T cd07145         220 SKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAV----KRILVEEEVYDKFLKLLVEKVKKLKV  295 (456)
T ss_pred             HHHhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccC----eeEEEcHHHHHHHHHHHHHHHhcCCc
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++.+||++++.+++++.++|+.+.++|+++.+||..                                      
T Consensus       296 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~--------------------------------------  337 (456)
T cd07145         296 GDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKR--------------------------------------  337 (456)
T ss_pred             CCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCC--------------------------------------
Confidence            999999999999999999999988888877777776666532                                      


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          .  .++|++|||
T Consensus       338 --------------------------------------------------------------------~--~g~~~~Ptv  347 (456)
T cd07145         338 --------------------------------------------------------------------D--EGSFFPPTV  347 (456)
T ss_pred             --------------------------------------------------------------------C--CCeEECCEe
Confidence                                                                                1  278999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCCC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAP  335 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~p  335 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..... .+.+|
T Consensus       348 l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~p  427 (456)
T cd07145         348 LENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLP  427 (456)
T ss_pred             ecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999965433 46789


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|.||+|+++|.+++++|++.|+++
T Consensus       428 fgG~~~SG~G~~~g~~~l~~f~~~k~v~  455 (456)
T cd07145         428 FGGFKKSGIGREGVRYTMLEMTEEKTIV  455 (456)
T ss_pred             CCCcccccCCcCchHHHHHHhhceeEEe
Confidence            9999999999999999999999999875

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=8e-33  Score=299.24  Aligned_cols=249  Identities=42%  Similarity=0.669  Sum_probs=221.3

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+|+|++.+....+                      
T Consensus       136 ~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  215 (451)
T cd07150         136 ATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIA  215 (451)
T ss_pred             HHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998644321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++|++|+++|+++.+.+++
T Consensus       216 ~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~~  291 (451)
T cd07150         216 EKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSA----SRIIVEEPVYDEFVKKFVARASKLKV  291 (451)
T ss_pred             HHHhhcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCC----eeEEEcHHHHHHHHHHHHHHHHhcCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+.++.+||+++..+.+++.++++.+.++|+++.+||.                                       
T Consensus       292 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~---------------------------------------  332 (451)
T cd07150         292 GDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK---------------------------------------  332 (451)
T ss_pred             CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCc---------------------------------------
Confidence            99999999999999999988888887777666666655542                                       


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .   .|+|++|||
T Consensus       333 -------------------------------------------------------------------~---~g~~~~Ptv  342 (451)
T cd07150         333 -------------------------------------------------------------------Y---DGNFYQPTV  342 (451)
T ss_pred             -------------------------------------------------------------------c---CCcEEcCEE
Confidence                                                                               1   367899999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCCC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAP  335 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~p  335 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..... .+.+|
T Consensus       343 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~p  422 (451)
T cd07150         343 LTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVP  422 (451)
T ss_pred             EeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999976543 46789


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|.||+|+++|.++++.|++.|+++
T Consensus       423 fgG~~~SG~G~~~g~~~l~~~~~~k~v~  450 (451)
T cd07150         423 FGGVKASGFGREGGEWSMEEFTELKWIT  450 (451)
T ss_pred             cCCccccccCcCCcHHHHHHhheeeEEe
Confidence            9999999999999999999999999874

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=8.7e-33  Score=299.52  Aligned_cols=261  Identities=26%  Similarity=0.394  Sum_probs=225.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcC-CCCccEEEecCCCCCCh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPGYGPMSA------------------------   56 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aG-lP~gvv~vv~g~~~~~~------------------------   56 (605)
                      ++|++++||++||+||+|||+.+|++++++++++.++| +|+|++|+|+|++....                        
T Consensus       161 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l~~~d~v~fTGS~~~G~~i~~~  240 (513)
T cd07128         161 MLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHLGEQDVVAFTGSAATAAKLRAH  240 (513)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhcccCCCCEEEEECCHHHHHHHHHH
Confidence            57899999999999999999999999999999999999 99999999998532100                        


Q ss_pred             ----h---------------------h-----h---------------hhhcCCcccccceeEeccccHHHHHHHHHHHH
Q psy1099          57 ----P---------------------Y-----W---------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA   91 (605)
Q Consensus        57 ----~---------------------~-----~---------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~   91 (605)
                          .                     .     +               .|.|.++    +|+|||+++|++|+++|++++
T Consensus       241 a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~----~rv~V~~~i~d~f~~~l~~~~  316 (513)
T cd07128         241 PNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAI----RRAFVPEARVDAVIEALKARL  316 (513)
T ss_pred             hhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCC----ceEEEehHHHHHHHHHHHHHH
Confidence                0                     0     1               1345555    899999999999999999999


Q ss_pred             hcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeE
Q psy1099          92 AARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT  171 (605)
Q Consensus        92 ~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~  171 (605)
                      +++++|+|+++++.+||++++.+++++.++|+.+.+. +++.+||.....                              
T Consensus       317 ~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~------------------------------  365 (513)
T cd07128         317 AKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFE------------------------------  365 (513)
T ss_pred             HhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCcccc------------------------------
Confidence            9999999999999999999999999999999999887 888888753100                              


Q ss_pred             EEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCee
Q psy1099         172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYF  251 (605)
Q Consensus       172 ~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~  251 (605)
                                                                                          .. ......|+|
T Consensus       366 --------------------------------------------------------------------~~-~~~~~~g~~  376 (513)
T cd07128         366 --------------------------------------------------------------------VV-GADAEKGAF  376 (513)
T ss_pred             --------------------------------------------------------------------cc-CCCCCCCEE
Confidence                                                                                00 000125889


Q ss_pred             eeeeEeeccCcc--hhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhh--cccEEEecc
Q psy1099         252 IEPTVFSNVTDD--FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN--AGSVWINCY  327 (605)
Q Consensus       252 ~~Ptvl~~v~~~--~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~--~g~v~iN~~  327 (605)
                      ++|||+.+++++  +++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++  +|+|+||..
T Consensus       377 ~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~  456 (513)
T cd07128         377 FPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNR  456 (513)
T ss_pred             ECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCC
Confidence            999999999874  8999999999999999999999999999999999999999999999999999997  999999964


Q ss_pred             C---------CcCCCCCccccccCCCchHH-hHHhhhcccceeEEEecC
Q psy1099         328 Q---------AVVPQAPFGGFKESGIGREL-GKAALDEYTELKTVTESP  366 (605)
Q Consensus       328 ~---------~~~~~~pfGG~~~SG~G~~~-G~~~~~~~~~~k~~t~s~  366 (605)
                      .         ...+.+||||+|.||+|++. |.+++++|++.|+++..|
T Consensus       457 ~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~~~~  505 (513)
T cd07128         457 DSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGSP  505 (513)
T ss_pred             ccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeeeCCH
Confidence            2         22467899999999999995 699999999999999885

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=9.5e-33  Score=298.56  Aligned_cols=250  Identities=41%  Similarity=0.708  Sum_probs=224.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++.++|++ |+|+|++|+|+|+++.....+                      
T Consensus       135 ~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~  213 (450)
T cd07092         135 AAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVA  213 (450)
T ss_pred             HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            468899999999999999999999999999999999 999999999998654211000                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    ++++||+++|++|+++|+++++++++
T Consensus       214 ~~a~~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~----~~v~V~~~i~~~f~~~l~~~~~~~~~  289 (450)
T cd07092         214 RAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAA----CRVYVHESVYDEFVAALVEAVSAIRV  289 (450)
T ss_pred             HHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCC----cEEEEeHHHHHHHHHHHHHHHhhCCc
Confidence                                                       1356665    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+.++.+||+++..+.+++.++|+++. +|+++.+||..                                      
T Consensus       290 g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~--------------------------------------  330 (450)
T cd07092         290 GDPDDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRR--------------------------------------  330 (450)
T ss_pred             CCCCCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCC--------------------------------------
Confidence            999999999999999999998888888776 77777766642                                      


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       331 --------------------------------------------------------------------~~~~g~~~~Ptv  342 (450)
T cd07092         331 --------------------------------------------------------------------AEGPGYFYEPTV  342 (450)
T ss_pred             --------------------------------------------------------------------CCCCccEEeeEE
Confidence                                                                                112578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       343 l~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~Pf  422 (450)
T cd07092         343 VAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPH  422 (450)
T ss_pred             EEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999976666788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.+++++|++.|+++
T Consensus       423 gG~~~SG~G~~~g~~~~~~~~~~k~~~  449 (450)
T cd07092         423 GGFKQSGYGKDLSIYALEDYTRIKHVM  449 (450)
T ss_pred             CCcccCcCCCCChHHHHHHHheeeEEe
Confidence            999999999999999999999999874

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=8.8e-33  Score=299.03  Aligned_cols=256  Identities=47%  Similarity=0.822  Sum_probs=229.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+++|+++.+++++|.++|+|+|++|+|+|++......+                      
T Consensus       136 ~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~  215 (457)
T cd07114         136 LAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIA  215 (457)
T ss_pred             HHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    ++++||+++|++|+++|+++.+.+++
T Consensus       216 ~~aa~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~v~~~f~~~l~~~~~~~~~  291 (457)
T cd07114         216 RAAAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAG----SRLLVQRSIYDEFVERLVARARAIRV  291 (457)
T ss_pred             HHHHhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCC----ceEEEcHHHHHHHHHHHHHHHHhCCC
Confidence                                                       0356665    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+.++++||+++..+.+++.++|+.+.++|+++.+||....                                    
T Consensus       292 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~------------------------------------  335 (457)
T cd07114         292 GDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPS------------------------------------  335 (457)
T ss_pred             CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccc------------------------------------
Confidence            99999999999999999999999999999988988888885410                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                        ......|+|++|||
T Consensus       336 ------------------------------------------------------------------~~~~~~g~~~~Ptv  349 (457)
T cd07114         336 ------------------------------------------------------------------GADLGAGYFFEPTI  349 (457)
T ss_pred             ------------------------------------------------------------------cccCCCCCEECCEE
Confidence                                                                              00012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||..+...+..||
T Consensus       350 l~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pf  429 (457)
T cd07114         350 LADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPF  429 (457)
T ss_pred             EeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987767788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.+++++|++.|+++
T Consensus       430 gG~k~SG~G~~~g~~~~~~f~~~k~~~  456 (457)
T cd07114         430 GGFKDSGIGRENGIEAIREYTQTKSVW  456 (457)
T ss_pred             CCCccCcCCccchHHHHHHHhceeEEe
Confidence            999999999999999999999999875

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=1.2e-32  Score=299.19  Aligned_cols=253  Identities=45%  Similarity=0.741  Sum_probs=225.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++..++++|+++|+|+|++|+|+|+++.....+                      
T Consensus       150 ~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  229 (468)
T cd07088         150 IARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIM  229 (468)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            4679999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|+++++++.+++++
T Consensus       230 ~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~  305 (468)
T cd07088         230 EAAAENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCA----ERVYVHEDIYDEFMEKLVEKMKAVKV  305 (468)
T ss_pred             HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCC----eEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+.++.+||++++.+++++.++|+.++++|+++.+||...                                     
T Consensus       306 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~-------------------------------------  348 (468)
T cd07088         306 GDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRP-------------------------------------  348 (468)
T ss_pred             CCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCC-------------------------------------
Confidence            9999999999999999999999988888888888777776421                                     


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       349 --------------------------------------------------------------------~~~~g~~~~Ptv  360 (468)
T cd07088         349 --------------------------------------------------------------------EGEKGYFYEPTV  360 (468)
T ss_pred             --------------------------------------------------------------------CCCCceeEcCEE
Confidence                                                                                002478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.........||
T Consensus       361 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~  440 (468)
T cd07088         361 LTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFH  440 (468)
T ss_pred             EecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999976655556799


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.++++.|++.|+++
T Consensus       441 gG~k~SG~G~~~g~~~l~~~t~~k~v~  467 (468)
T cd07088         441 AGWKKSGLGGADGKHGLEEYLQTKVVY  467 (468)
T ss_pred             CCcccccCCcCchHHHHHHHhceeEEe
Confidence            999999999999999999999999864

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=1.7e-32  Score=298.57  Aligned_cols=258  Identities=43%  Similarity=0.710  Sum_probs=229.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|+++.....+                      
T Consensus       152 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~  231 (478)
T cd07131         152 PSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIG  231 (478)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998654221100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++|++|+++|++++.++++
T Consensus       232 ~~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~~  307 (478)
T cd07131         232 ETCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTAT----SRLIVHESVYDEFLKRFVERAKRLRV  307 (478)
T ss_pred             HHHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----eEEEEehhhHHHHHHHHHHHHHhcCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||++++.+.+++..+|+.|.+.|+++..||.....                                   
T Consensus       308 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-----------------------------------  352 (478)
T cd07131         308 GDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTG-----------------------------------  352 (478)
T ss_pred             CCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccc-----------------------------------
Confidence            999999999999999999999999999999999888888753100                                   


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....++|++|||
T Consensus       353 -------------------------------------------------------------------~~~~~g~~~~Ptv  365 (478)
T cd07131         353 -------------------------------------------------------------------GGYEKGYFVEPTV  365 (478)
T ss_pred             -------------------------------------------------------------------ccCCCCceECCEE
Confidence                                                                               0012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAP  335 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~p  335 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+|
T Consensus       366 l~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~p  445 (478)
T cd07131         366 FTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLP  445 (478)
T ss_pred             EeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997544 357899


Q ss_pred             ccccccCCCc-hHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIG-RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+| +++|.+++++|++.|+++..
T Consensus       446 fgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07131         446 FGGVKKSGNGHREAGTTALDAFTEWKAVYVD  476 (478)
T ss_pred             CCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence            9999999999 78899999999999988754

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=1.3e-32  Score=298.11  Aligned_cols=255  Identities=43%  Similarity=0.735  Sum_probs=228.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++|+++|+|+|++|+|+|++++....+                      
T Consensus       147 ~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~  226 (466)
T cd07138         147 IVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVA  226 (466)
T ss_pred             HHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|+++++++++.+++
T Consensus       227 ~~aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~  302 (466)
T cd07138         227 EAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAP----TRMLVPRSRYAEAEEIAAAAAEAYVV  302 (466)
T ss_pred             HHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCC----cEEEEeHhHHHHHHHHHHHHHHhcCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+.++.+||++++.+++++.++++++.++|+++++||....                                    
T Consensus       303 g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~------------------------------------  346 (466)
T cd07138         303 GDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRP------------------------------------  346 (466)
T ss_pred             CCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC------------------------------------
Confidence            99999999999999999999999999998888888888875210                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....++|++|||
T Consensus       347 -------------------------------------------------------------------~~~~~g~~~~Ptv  359 (466)
T cd07138         347 -------------------------------------------------------------------EGLERGYFVKPTV  359 (466)
T ss_pred             -------------------------------------------------------------------CcCCCCceECCEE
Confidence                                                                               0012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||... ..+.+||
T Consensus       360 l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~Pf  438 (466)
T cd07138         360 FADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPF  438 (466)
T ss_pred             ecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999753 4678999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      ||+|.||+|+++|.++++.|++.|++++
T Consensus       439 gG~k~SG~G~~~g~~~~~~~~~~k~v~~  466 (466)
T cd07138         439 GGYKQSGNGREWGRYGLEEFLEVKSIQG  466 (466)
T ss_pred             CCcccccCCccchHHHHHHhcceeEEeC
Confidence            9999999999999999999999998764

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=2.2e-32  Score=296.62  Aligned_cols=258  Identities=31%  Similarity=0.509  Sum_probs=226.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHH----HHcCCCCccEEEecCCCCCChhhh------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALT----QQAGFPDGVISVLPGYGPMSAPYW------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~~~~~------------------   59 (605)
                      +++++++||++||+||+|||+++|++++++++++    .++|+|+|++|+|+|+++....++                  
T Consensus       137 ~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~  216 (465)
T cd07098         137 LLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGK  216 (465)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHH
Confidence            4678999999999999999999999999766655    678999999999998653211000                  


Q ss_pred             ----------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          60 ----------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        60 ----------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                                                                    .|.|.++    +|+|||+++|++|+++|++++..
T Consensus       217 ~v~~~a~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~L~~~~~~  292 (465)
T cd07098         217 KVMAAAAESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGI----ERVIVHEKIYDKLLEILTDRVQA  292 (465)
T ss_pred             HHHHHHHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----cEEEEcHHHHHHHHHHHHHHHHh
Confidence                                                          1345555    89999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|++.++.+||++++.+++++.++++.++++|+++.+||....                                 
T Consensus       293 l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---------------------------------  339 (465)
T cd07098         293 LRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYP---------------------------------  339 (465)
T ss_pred             cCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC---------------------------------
Confidence            99999999999999999999999999999999999999888875310                                 


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                           ......++|++
T Consensus       340 ---------------------------------------------------------------------~~~~~~g~~~~  350 (465)
T cd07098         340 ---------------------------------------------------------------------HPEYPQGHYFP  350 (465)
T ss_pred             ---------------------------------------------------------------------cCcCCCCcEEc
Confidence                                                                                 00012578999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcC
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVV  331 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~  331 (605)
                      |||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||...  ...
T Consensus       351 Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~  430 (465)
T cd07098         351 PTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYV  430 (465)
T ss_pred             CEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999643  335


Q ss_pred             CCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         332 PQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       332 ~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +..||||+|.||+|+++|.+++++|++.|+++..
T Consensus       431 ~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~  464 (465)
T cd07098         431 QQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED  464 (465)
T ss_pred             CCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence            7899999999999999999999999999988754

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=1.8e-32  Score=293.45  Aligned_cols=250  Identities=30%  Similarity=0.472  Sum_probs=221.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+++|+.+.+..++                      
T Consensus       117 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~  195 (433)
T cd07134         117 AFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAA  195 (433)
T ss_pred             HHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeCChhHHHHHHhCCCCEEEEECChHHHHHHHHH
Confidence            4689999999999999999999999999999999999 99999999998654321100                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +++|||+++||+|+++|+++++.++.|+
T Consensus       196 aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~v~d~f~~~L~~~~~~~~~~~  271 (433)
T cd07134         196 AAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAP----DYVFVHESVKDAFVEHLKAEIEKFYGKD  271 (433)
T ss_pred             HHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCC----cEEEECHHHHHHHHHHHHHHHHHHcCCC
Confidence                                                     0356665    8999999999999999999999998888


Q ss_pred             C-CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          99 P-FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        99 ~-~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      | .+.++.+||++++.+.+++.++|+++.++|+++.+||..                                       
T Consensus       272 ~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~---------------------------------------  312 (433)
T cd07134         272 AARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF---------------------------------------  312 (433)
T ss_pred             CCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc---------------------------------------
Confidence            7 889999999999999999988888888888777776632                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                          ...++|++|||+
T Consensus       313 --------------------------------------------------------------------~~~g~~~~Ptvl  324 (433)
T cd07134         313 --------------------------------------------------------------------DAAQRYIAPTVL  324 (433)
T ss_pred             --------------------------------------------------------------------CCCCCEEeeEEE
Confidence                                                                                124689999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcCCCCC
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQAP  335 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~~~~p  335 (605)
                      .++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||...  ...+..|
T Consensus       325 ~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~P  404 (433)
T cd07134         325 TNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLP  404 (433)
T ss_pred             eCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999654  3457889


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|+||+|+++|.+++++|++.|++.
T Consensus       405 fGG~k~SG~G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         405 FGGVNNSGIGSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             CCCcCcccCCCcCcHHHHHHhcccceee
Confidence            9999999999999999999999998764

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=2.2e-32  Score=295.67  Aligned_cols=254  Identities=38%  Similarity=0.637  Sum_probs=225.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++..... ++                     
T Consensus       134 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  213 (454)
T cd07109         134 TGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVM  213 (454)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999985432211 00                     


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++|++|+++|+++++++++
T Consensus       214 ~~aa~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~~  289 (454)
T cd07109         214 RAAAENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAG----SRLLVHRSIYDEVLERLVERFRALRV  289 (454)
T ss_pred             HHHhhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccC----cEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+ ++.+||+++..+++++.++|+++.++|+++..||....                                    
T Consensus       290 G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~------------------------------------  332 (454)
T cd07109         290 GPGLE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAE------------------------------------  332 (454)
T ss_pred             CCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCc------------------------------------
Confidence            99976 68999999999999999999999888888888775310                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....|+|++|||
T Consensus       333 -------------------------------------------------------------------~~~~~g~~~~Ptv  345 (454)
T cd07109         333 -------------------------------------------------------------------GAPAGGYFVAPTL  345 (454)
T ss_pred             -------------------------------------------------------------------ccCCCCcEECcEE
Confidence                                                                               0012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC-CcCCCCC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-AVVPQAP  335 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~-~~~~~~p  335 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||... ...+.+|
T Consensus       346 l~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~p  425 (454)
T cd07109         346 LDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELP  425 (454)
T ss_pred             EecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999765 4567889


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |||+|.||+|+++|.+++++|++.|+++
T Consensus       426 fgG~k~SG~G~~~g~~~~~~f~~~k~i~  453 (454)
T cd07109         426 FGGVKKSGHGREKGLEALYNYTQTKTVA  453 (454)
T ss_pred             cCCcccCcCCccchHHHHHHHhceeEEe
Confidence            9999999999999999999999999875

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=2.4e-32  Score=298.18  Aligned_cols=253  Identities=36%  Similarity=0.573  Sum_probs=222.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      +++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.....                        
T Consensus       184 ~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~  263 (511)
T TIGR01237       184 AVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIY  263 (511)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHH
Confidence            57899999999999999999999999999999999999999999999986432110                        


Q ss_pred             -----------hhh------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          58 -----------YWR------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        58 -----------~~~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                                 .+.                                    |.|.++    +|+|||+++|++|+++|+++
T Consensus       264 ~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~L~~~  339 (511)
T TIGR01237       264 EDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSAC----SRVVVLSPVYDAVVERFVEA  339 (511)
T ss_pred             HHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccc----eEEEEehhHHHHHHHHHHHH
Confidence                       000                                    345555    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ  170 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~  170 (605)
                      .+++++|+|.++++.+||++++.+.+++..+++.+.++| ++..||..                                
T Consensus       340 ~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~--------------------------------  386 (511)
T TIGR01237       340 TRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCD--------------------------------  386 (511)
T ss_pred             HHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCcc--------------------------------
Confidence            999999999999999999999999999999888887777 56666532                                


Q ss_pred             EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099         171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  250 (605)
Q Consensus       171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~  250 (605)
                                                                                                ....|+
T Consensus       387 --------------------------------------------------------------------------~~~~g~  392 (511)
T TIGR01237       387 --------------------------------------------------------------------------APSEGY  392 (511)
T ss_pred             --------------------------------------------------------------------------CCCCCe
Confidence                                                                                      112578


Q ss_pred             eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--
Q psy1099         251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--  328 (605)
Q Consensus       251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--  328 (605)
                      |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||...  
T Consensus       393 ~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~  472 (511)
T TIGR01237       393 FIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITG  472 (511)
T ss_pred             EEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999653  


Q ss_pred             CcCCCCCccccccCCCch-HHhHHhhhcccceeEEEec
Q psy1099         329 AVVPQAPFGGFKESGIGR-ELGKAALDEYTELKTVTES  365 (605)
Q Consensus       329 ~~~~~~pfGG~~~SG~G~-~~G~~~~~~~~~~k~~t~s  365 (605)
                      ...+.+||||+|.||+|+ .+|.+++++|++.|+++..
T Consensus       473 ~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~  510 (511)
T TIGR01237       473 AIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTEN  510 (511)
T ss_pred             CCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEe
Confidence            334568999999999995 7899999999999988653

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=2.6e-32  Score=298.35  Aligned_cols=255  Identities=40%  Similarity=0.668  Sum_probs=224.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCCh-------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA-------------------------   56 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~-------------------------   56 (605)
                      +++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++....                         
T Consensus       183 ~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~  262 (512)
T cd07124         183 LAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIY  262 (512)
T ss_pred             HHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998643210                         


Q ss_pred             ----h------hhh------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          57 ----P------YWR------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        57 ----~------~~~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                          .      .+.                                    |.|.++    ++++||+++|++|+++++++
T Consensus       263 ~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~  338 (512)
T cd07124         263 ERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSAC----SRVIVHESVYDEFLERLVER  338 (512)
T ss_pred             HHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccc----eEEEEcHHHHHHHHHHHHHH
Confidence                0      011                                    245554    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ  170 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~  170 (605)
                      +.++++|+|.+.++.+||++++.+.+++.++|+.+.+ |+++++||....                              
T Consensus       339 ~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~------------------------------  387 (512)
T cd07124         339 TKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLE------------------------------  387 (512)
T ss_pred             HHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCC------------------------------
Confidence            9999999999999999999999999999999988877 777777764310                              


Q ss_pred             EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099         171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  250 (605)
Q Consensus       171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~  250 (605)
                                                                                                ....|+
T Consensus       388 --------------------------------------------------------------------------~~~~g~  393 (512)
T cd07124         388 --------------------------------------------------------------------------LAAEGY  393 (512)
T ss_pred             --------------------------------------------------------------------------CCCCCc
Confidence                                                                                      002578


Q ss_pred             eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--
Q psy1099         251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--  328 (605)
Q Consensus       251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--  328 (605)
                      |++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||...  
T Consensus       394 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~  473 (512)
T cd07124         394 FVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITG  473 (512)
T ss_pred             eEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999643  


Q ss_pred             CcCCCCCccccccCCCc-hHHhHHhhhcccceeEEEec
Q psy1099         329 AVVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       329 ~~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ...+.+||||+|+||+| +++|.++++.|++.|+++.+
T Consensus       474 ~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~  511 (512)
T cd07124         474 ALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTEN  511 (512)
T ss_pred             CCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEe
Confidence            33467899999999999 78889999999999988653

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=2.8e-32  Score=293.59  Aligned_cols=249  Identities=41%  Similarity=0.681  Sum_probs=219.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchh-HHHHHHHHHHcCCCCccEEEecCCCCCChhhh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLT-ALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~-~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------   59 (605)
                      ++|++++||++||+||+|||+.+|++ +.++.+++.++|+|+|++|+++|++......+                     
T Consensus       115 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v  194 (431)
T cd07104         115 AMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHI  194 (431)
T ss_pred             HHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence            46899999999999999999999998 57899999999999999999998654321100                     


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    ++++||+++|++|++++.++.+.++
T Consensus       195 ~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~~v~v~~~i~~~f~~~l~~~~~~~~  270 (431)
T cd07104         195 GELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAA----GRILVHESVYDEFVEKLVAKAKALP  270 (431)
T ss_pred             HHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccC----cEEEEcHHHHHHHHHHHHHHHHhcC
Confidence                                                        0346665    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.+.++.+||+++..+.+++.++++.+.+.|+++.+||                                       
T Consensus       271 ~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg---------------------------------------  311 (431)
T cd07104         271 VGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGG---------------------------------------  311 (431)
T ss_pred             cCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCC---------------------------------------
Confidence            99999999999999999998888877777666666655544                                       


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                         ..   .++|++||
T Consensus       312 -------------------------------------------------------------------~~---~g~~~~Pt  321 (431)
T cd07104         312 -------------------------------------------------------------------TY---EGLFYQPT  321 (431)
T ss_pred             -------------------------------------------------------------------CC---CCceECCE
Confidence                                                                               21   36789999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQA  334 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~  334 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..... .+.+
T Consensus       322 vl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~  401 (431)
T cd07104         322 VLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHV  401 (431)
T ss_pred             EeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999975543 4789


Q ss_pred             CccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         335 PFGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||||+|.||+|+++|.++++.|++.|+++
T Consensus       402 pfgG~~~SG~g~~~g~~~l~~~~~~k~~~  430 (431)
T cd07104         402 PFGGVKASGGGRFGGPASLEEFTEWQWIT  430 (431)
T ss_pred             CCCCcccccCCccchHHHHHHhhceeEEe
Confidence            99999999999999999999999999874

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>KOG2456|consensus

Probab=100.00  E-value=2.3e-33  Score=276.35  Aligned_cols=296  Identities=29%  Similarity=0.422  Sum_probs=246.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhhhhhcCCcccccceeEeccccHH
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYD   81 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~   81 (605)
                      .+-.+++||+||||||+||||.+|.++.++++++.++ |+.+++.||.|..+++.++|.+ ..+.+-|+++         
T Consensus       121 ~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Ggv~ETt~LL~~-rfD~IfyTGs---------  189 (477)
T KOG2456|consen  121 TLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGGVPETTELLKQ-RFDHIFYTGS---------  189 (477)
T ss_pred             ehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCCCchHHHHHHh-hccEEEecCC---------
Confidence            3456899999999999999999999999999999999 9999999999998888888887 3444444442         


Q ss_pred             HHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhh
Q psy1099          82 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  161 (605)
Q Consensus        82 ~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~  161 (605)
                      ..++++++.+++..+.                   .            -++++||++         ||+|++..+..-++
T Consensus       190 p~VgkIim~aAaKhLT-------------------P------------vtLELGGKs---------P~~vd~~~d~~ia~  229 (477)
T KOG2456|consen  190 PRVGKIIMAAAAKHLT-------------------P------------VTLELGGKS---------PCYVDKNCDLKIAA  229 (477)
T ss_pred             chHHHHHHHHHHhcCC-------------------c------------EEEEcCCCC---------CeeecCCcCHHHHH
Confidence            3466777766665552                   1            179999998         89998766443355


Q ss_pred             ccccccc----eeEEEe-------cCCHHHHHHHHhc---ccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHh
Q psy1099         162 REEIFGP----VQTIIK-------FKTLDEVIERAND---TKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNY  227 (605)
Q Consensus       162 ~~~ifgp----~~~~v~-------~~~~~~~i~~~~~---~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~  227 (605)
                      ++++||.    +|+|+.       .+....+++.++.   .-||       .+++....+.+++|     ..|++|+..+
T Consensus       230 ~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG-------~n~~eS~d~sRiIn-----~~hf~Rl~~l  297 (477)
T KOG2456|consen  230 RRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYG-------ENPKESKDLSRIIN-----QRHFQRLSAL  297 (477)
T ss_pred             HHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhC-------CCccccccHHHHhh-----HHHHHHHHHH
Confidence            6677774    466654       3456777777765   3455       56777777877765     6899999999


Q ss_pred             hhhccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCCh
Q psy1099         228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI  307 (605)
Q Consensus       228 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~  307 (605)
                      +++-    +|+..||+++. ...|++|||+.||++++++|+||+|||||||++|.|+||+|+.+|+.+.+|++|+||+|.
T Consensus       298 l~~~----~kv~~Gg~~d~-~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~  372 (477)
T KOG2456|consen  298 LDET----GKVAIGGESDE-SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNE  372 (477)
T ss_pred             hcCC----CceecCCccch-hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCH
Confidence            9853    78999998754 456999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccEEEec--cCCcCCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         308 DTANTFAHAINAGSVWINC--YQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       308 ~~~~~~~~~~~~g~v~iN~--~~~~~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ...++|.+++.+|.|.+|.  .|.....+||||+|.||+|+++|+++++.|++.|++...
T Consensus       373 ~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r  432 (477)
T KOG2456|consen  373 KLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR  432 (477)
T ss_pred             HHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence            9999999999999999995  566778999999999999999999999999999975433

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=1.6e-32  Score=297.39  Aligned_cols=254  Identities=45%  Similarity=0.786  Sum_probs=224.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++++++++||+|+|++|+++|++.+....+                      
T Consensus       143 ~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  222 (462)
T PF00171_consen  143 AVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIA  222 (462)
T ss_dssp             HHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHH
T ss_pred             cccchhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhh
Confidence            4688999999999999999999999999999999999999999999999654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    ++++||+++|++|+++|+++.+++++
T Consensus       223 ~~a~~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~----~~v~V~~~i~~~f~~~l~~~~~~l~~  298 (462)
T PF00171_consen  223 KAAAKNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAP----SRVLVHESIYDEFVEALKERVAKLRV  298 (462)
T ss_dssp             HHHHTTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSE----EEEEEEHHHHHHHHHHHHHHHHTSEB
T ss_pred             hhcccccccccccccccceeeEecccccccccccccchhccccccccccc----ccccccccccchhhhhhhhccccccc
Confidence                                                       1356666    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+.++.+||+++....+++.++++.+.++|+++.+||...                                     
T Consensus       299 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-------------------------------------  341 (462)
T PF00171_consen  299 GDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQ-------------------------------------  341 (462)
T ss_dssp             SSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSS-------------------------------------
T ss_pred             cCCccccccccccccchhhhhcccccccccccccccccccccc-------------------------------------
Confidence            9999999999999999999999999999999888888887310                                     


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                        ......|+|++|||
T Consensus       342 ------------------------------------------------------------------~~~~~~g~~~~Ptv  355 (462)
T PF00171_consen  342 ------------------------------------------------------------------EADPENGFFIPPTV  355 (462)
T ss_dssp             ------------------------------------------------------------------SBCSSSSTEEEEEE
T ss_pred             ------------------------------------------------------------------cccccccccccccc
Confidence                                                                              01124689999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCC-CC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ-AP  335 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~-~p  335 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||........ +|
T Consensus       356 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~p  435 (462)
T PF00171_consen  356 LEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLP  435 (462)
T ss_dssp             EESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSE
T ss_pred             cccccccccccccccccccceecccccchhhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987655444 69


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEE
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTV  362 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~  362 (605)
                      |||+|.||+|+++|.+++++|++.|++
T Consensus       436 fgG~~~SG~G~~~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  436 FGGFKQSGIGREGGPEGLDEFTQIKTV  462 (462)
T ss_dssp             BE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred             CCCcccccCCcchHHHHHHHhCCccCC
Confidence            999999999999999999999999875

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=3.8e-32  Score=293.82  Aligned_cols=249  Identities=27%  Similarity=0.418  Sum_probs=215.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||+|||+||+||||.+|.++.++.++++++ +|+|++++|+|+.+.+..++                      
T Consensus       126 ~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~  204 (493)
T PTZ00381        126 TLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQA  204 (493)
T ss_pred             HHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHH
Confidence            5788999999999999999999999999999999996 99999999998543221110                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    .+++||++++|+|++++++..+.+. |+
T Consensus       205 aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~----~~vlV~~~i~d~f~~~l~~~~~~~~-g~  279 (493)
T PTZ00381        205 AAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAP----DYVLVHRSIKDKFIEALKEAIKEFF-GE  279 (493)
T ss_pred             HHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCC----CEEEEeHHHHHHHHHHHHHHHHHHh-CC
Confidence                                                     1457776    9999999999999999999998885 66


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      +.+.++++||+++..+++++.++++   +.|+++..||                                          
T Consensus       280 ~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG------------------------------------------  314 (493)
T PTZ00381        280 DPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGG------------------------------------------  314 (493)
T ss_pred             CCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECC------------------------------------------
Confidence            6678899999999998888877664   2344444444                                          


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                      .. ...++|++|||+.
T Consensus       315 ----------------------------------------------------------------~~-~~~~~~i~Ptvl~  329 (493)
T PTZ00381        315 ----------------------------------------------------------------EV-DIENKYVAPTIIV  329 (493)
T ss_pred             ----------------------------------------------------------------Cc-CCCCCeEeeEEEe
Confidence                                                                            32 1246789999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--CCcCCCCCc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--QAVVPQAPF  336 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~~~~~~~pf  336 (605)
                      ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||..  +...+.+||
T Consensus       330 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PF  409 (493)
T PTZ00381        330 NPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPF  409 (493)
T ss_pred             cCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999964  445688999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ||+|.||+|+++|.++++.|++.|+++...
T Consensus       410 GG~g~SG~G~~~G~~g~~~fs~~k~v~~~~  439 (493)
T PTZ00381        410 GGVGNSGMGAYHGKYGFDTFSHPKPVLNKS  439 (493)
T ss_pred             CCcCcccccccchHHHHHhccceeEEEEcc
Confidence            999999999999999999999999987663

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=2e-32  Score=292.80  Aligned_cols=246  Identities=32%  Similarity=0.449  Sum_probs=216.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++..+.+++++ |+|+|++|+|+|+++....++                      
T Consensus       125 ~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-~lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~  203 (436)
T cd07135         125 ALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-YLDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEA  203 (436)
T ss_pred             HHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-hCCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHH
Confidence            578999999999999999999999999999999999 699999999998654321100                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|+|||+++||+|+++|+++.+.+++|+
T Consensus       204 aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g~  279 (436)
T cd07135         204 AAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAP----DYVLVDPSVYDEFVEELKKVLDEFYPGG  279 (436)
T ss_pred             HHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCC----CEEeccHHHHHHHHHHHHHHHHHhcCCC
Confidence                                                     0345555    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      | +.++.+||+++..+.+++.++++++   |+++..||.                                         
T Consensus       280 p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~-----------------------------------------  314 (436)
T cd07135         280 A-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGE-----------------------------------------  314 (436)
T ss_pred             C-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCC-----------------------------------------
Confidence            9 9999999999999988888777665   555555543                                         


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                       .. .+++|++|||+.
T Consensus       315 -----------------------------------------------------------------~~-~~g~~~~Ptvl~  328 (436)
T cd07135         315 -----------------------------------------------------------------MD-EATRFIPPTIVS  328 (436)
T ss_pred             -----------------------------------------------------------------cC-CCCCEEccEEEe
Confidence                                                                             21 257899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcCCCCCc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQAPF  336 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~~~~pf  336 (605)
                      ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||...  ...+..||
T Consensus       329 ~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~Pf  408 (436)
T cd07135         329 DVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPF  408 (436)
T ss_pred             cCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999643  34578999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.+++++|++.|++.
T Consensus       409 GG~k~SG~G~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         409 GGVGDSGYGAYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             CCcCcccCCccccHhHHHHhccccccc
Confidence            999999999999999999999988763

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=2.8e-32  Score=291.55  Aligned_cols=246  Identities=28%  Similarity=0.451  Sum_probs=215.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++..++++++++ +|+|++|+|+|+++.+..++                      
T Consensus       117 ~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~  195 (449)
T cd07136         117 ALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEA  195 (449)
T ss_pred             HHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEEEEeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHH
Confidence            5789999999999999999999999999999999998 99999999998543321110                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|++||+++||+|+++|+++++++++|+
T Consensus       196 aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~L~~~~~~~~~g~  271 (449)
T cd07136         196 AAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAP----DYVLVHESVKEKFIKELKEEIKKFYGED  271 (449)
T ss_pred             HHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCC----CEEEEcHHHHHHHHHHHHHHHHHhcCCC
Confidence                                                     1345555    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |.+ ++.+||+++..+.+++.++|+.+     ++++||                                          
T Consensus       272 p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG------------------------------------------  303 (449)
T cd07136         272 PLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGG------------------------------------------  303 (449)
T ss_pred             CCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECC------------------------------------------
Confidence            987 88999999999888887666542     444444                                          


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                      ... ..|+|++|||+.
T Consensus       304 ----------------------------------------------------------------~~~-~~g~~~~Ptvl~  318 (449)
T cd07136         304 ----------------------------------------------------------------NTD-RETLYIEPTILD  318 (449)
T ss_pred             ----------------------------------------------------------------CcC-CCCCEEeeEEEe
Confidence                                                                            221 247899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC--cCCCCCc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA--VVPQAPF  336 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~--~~~~~pf  336 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||....  ..+.+||
T Consensus       319 ~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~Pf  398 (449)
T cd07136         319 NVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPF  398 (449)
T ss_pred             cCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999997543  3478899


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|.||+|+++|.+++++|+..|+++..
T Consensus       399 GG~k~SG~G~~~g~~~l~~~t~~k~v~~~  427 (449)
T cd07136         399 GGVGNSGMGSYHGKYSFDTFSHKKSILKK  427 (449)
T ss_pred             cCcCcccCCcccCHHHHHHhccceEEEEc
Confidence            99999999999999999999999998866

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=3.2e-32  Score=291.65  Aligned_cols=251  Identities=25%  Similarity=0.367  Sum_probs=221.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|+++.++.++|+++ +|+|++|+|+|+.+....+                       
T Consensus       118 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~  196 (434)
T cd07133         118 ALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRA  196 (434)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHH
Confidence            5789999999999999999999999999999999997 9999999999854321100                       


Q ss_pred             ----h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          59 ----W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        59 ----~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                          +                                    .|.|.++    +|+|||+++|++|+++++++++.+++|+
T Consensus       197 aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~~~f~~~l~~~~~~~~~g~  272 (434)
T cd07133         197 AAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAP----DYVLVPEDKLEEFVAAAKAAVAKMYPTL  272 (434)
T ss_pred             HHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCC----CEEEEcHHHHHHHHHHHHHHHHHhcCCC
Confidence                0                                    1346665    8999999999999999999999999986


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                        +.++.+||++++.+++++.++|+.+.++|+++.+||....                                      
T Consensus       273 --~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--------------------------------------  312 (434)
T cd07133         273 --ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGE--------------------------------------  312 (434)
T ss_pred             --CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCc--------------------------------------
Confidence              5788999999999999999999998888888887774310                                      


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                        ....++|++|||+.
T Consensus       313 ------------------------------------------------------------------~~~~g~~~~Ptvl~  326 (434)
T cd07133         313 ------------------------------------------------------------------DFAATRKLPPTLVL  326 (434)
T ss_pred             ------------------------------------------------------------------CCCCCcEEeeEEEe
Confidence                                                                              00257899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcCCCCCc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQAPF  336 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~~~~pf  336 (605)
                      ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||...  ...+.+||
T Consensus       327 ~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~Pf  406 (434)
T cd07133         327 NVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPF  406 (434)
T ss_pred             CCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999653  34578999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.+++++|++.|+++
T Consensus       407 GG~k~SG~G~~~g~~~~~~ft~~k~v~  433 (434)
T cd07133         407 GGVGASGMGAYHGKEGFLTFSHAKPVF  433 (434)
T ss_pred             CCCCcccCCCcCCHHHHHHhcccceec
Confidence            999999999999999999999998864

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.2e-32  Score=305.42  Aligned_cols=261  Identities=26%  Similarity=0.380  Sum_probs=225.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcC-CCCccEEEecCCCCCCh----------------------h-
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPGYGPMSA----------------------P-   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aG-lP~gvv~vv~g~~~~~~----------------------~-   57 (605)
                      ++|+++|||++||+||+||||.+|+++.++++++.++| +|+|++|+|+|++....                      . 
T Consensus       165 ~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~~~~~~~~~i~~v~FTGS~~~G~~i~~~  244 (675)
T PRK11563        165 MLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAGDLLDHLDGQDVVTFTGSAATAQKLRAH  244 (675)
T ss_pred             HHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHHHHhhcCCCCCEEEEECcHHHHHHHHhh
Confidence            57899999999999999999999999999999999999 99999999998431100                      0 


Q ss_pred             -h------------------------------h---------------hhhcCCcccccceeEeccccHHHHHHHHHHHH
Q psy1099          58 -Y------------------------------W---------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA   91 (605)
Q Consensus        58 -~------------------------------~---------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~   91 (605)
                       .                              +               .|.|.++    +|+|||++|||+|++++++++
T Consensus       245 ~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~----~rv~V~~~i~d~f~~~l~~~~  320 (675)
T PRK11563        245 PNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAI----RRAIVPRALVDAVIEALRARL  320 (675)
T ss_pred             hhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccc----eeEEeeHHHHHHHHHHHHHHH
Confidence             0                              0               1345554    899999999999999999999


Q ss_pred             hcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeE
Q psy1099          92 AARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT  171 (605)
Q Consensus        92 ~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~  171 (605)
                      +++++|+|++.++.+||++++.+++++.++|+.|+++ +++++||....        .+                     
T Consensus       321 ~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~--------~~---------------------  370 (675)
T PRK11563        321 AKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSF--------EV---------------------  370 (675)
T ss_pred             hcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccc--------cc---------------------
Confidence            9999999999999999999999999999999999988 88888885210        00                     


Q ss_pred             EEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCee
Q psy1099         172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYF  251 (605)
Q Consensus       172 ~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~  251 (605)
                                                                                           . ......|+|
T Consensus       371 ---------------------------------------------------------------------~-~~~~~~g~f  380 (675)
T PRK11563        371 ---------------------------------------------------------------------V-GADAEKGAF  380 (675)
T ss_pred             ---------------------------------------------------------------------c-CCCCCCCee
Confidence                                                                                 0 000125899


Q ss_pred             eeeeEeeccCc--chhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhh--cccEEEecc
Q psy1099         252 IEPTVFSNVTD--DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN--AGSVWINCY  327 (605)
Q Consensus       252 ~~Ptvl~~v~~--~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~--~g~v~iN~~  327 (605)
                      ++|||+.++++  ++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++  +|.|+||..
T Consensus       381 ~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~  460 (675)
T PRK11563        381 FPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNR  460 (675)
T ss_pred             ECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCc
Confidence            99999999998  57999999999999999999999999999999999999999999999999999997  999999953


Q ss_pred             C--------Cc-CCCCCccccccCCCchHH-hHHhhhcccceeEEEecC
Q psy1099         328 Q--------AV-VPQAPFGGFKESGIGREL-GKAALDEYTELKTVTESP  366 (605)
Q Consensus       328 ~--------~~-~~~~pfGG~~~SG~G~~~-G~~~~~~~~~~k~~t~s~  366 (605)
                      .        .. .+.+||||+|.||+|++. |.+++++|++.|++...|
T Consensus       461 ~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~~~  509 (675)
T PRK11563        461 ESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGSP  509 (675)
T ss_pred             cccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeecCH
Confidence            1        11 367899999999999994 699999999999999886

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=4.8e-32  Score=294.45  Aligned_cols=252  Identities=27%  Similarity=0.369  Sum_probs=218.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      +++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|+.+.+..+                       
T Consensus       151 ~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~  230 (487)
T PRK09457        151 PNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHR  230 (487)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999853321100                       


Q ss_pred             --h----------------------------------------hhhcCCcccccceeEeccccH-HHHHHHHHHHHhcCc
Q psy1099          59 --W----------------------------------------RKSCLSPLAYRSRTYVQEDIY-DTFVKKAVEKAAARK   95 (605)
Q Consensus        59 --~----------------------------------------~~~~~~~~~~~~~~~v~~~i~-~~~~~~l~~~~~~~~   95 (605)
                        .                                        .|.|.++    +|+|||+++| |+|+++|++++++++
T Consensus       231 ~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~~d~f~~~l~~~~~~~~  306 (487)
T PRK09457        231 QFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCA----RRLLVPQGAQGDAFLARLVAVAKRLT  306 (487)
T ss_pred             HHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCC----ceEEEeccccHHHHHHHHHHHHhcCc
Confidence              0                                        0345555    8999999998 999999999999999


Q ss_pred             cCCCC-CCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          96 VGDPF-DKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        96 vg~~~-~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      +|+|+ ++++++||+++..+++++.+++++++++|+++.+||..                                    
T Consensus       307 vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~------------------------------------  350 (487)
T PRK09457        307 VGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQ------------------------------------  350 (487)
T ss_pred             CCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCc------------------------------------
Confidence            99997 78899999999999999999888888887777766532                                    


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                            ....++|++|
T Consensus       351 ----------------------------------------------------------------------~~~~g~~~~P  360 (487)
T PRK09457        351 ----------------------------------------------------------------------LQAGTGLLTP  360 (487)
T ss_pred             ----------------------------------------------------------------------cCCCCeeEec
Confidence                                                                                  1124689999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC-CcCCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-AVVPQ  333 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~-~~~~~  333 (605)
                      ||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||... ...+.
T Consensus       361 Tvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~  439 (487)
T PRK09457        361 GII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSA  439 (487)
T ss_pred             EEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCC
Confidence            999 7999999999999999999999999999999999999999999999999999999999999999999643 33467


Q ss_pred             CCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         334 APFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +||||+|+||+|++.|..+. +|+..|.++..
T Consensus       440 ~PfGG~k~SG~G~~~g~~~~-~~~~~k~~~~~  470 (487)
T PRK09457        440 APFGGVGASGNHRPSAYYAA-DYCAYPMASLE  470 (487)
T ss_pred             CCCCCcccccCCCCCchhHh-hheeeeEEEEe
Confidence            89999999999999886654 58888876654

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=6.5e-32  Score=293.18  Aligned_cols=256  Identities=30%  Similarity=0.467  Sum_probs=226.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+++|+++..+.++|.++|+|+|++|+|+|+.+....++                      
T Consensus       153 ~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~  232 (477)
T TIGR01722       153 PLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHT  232 (477)
T ss_pred             HHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998543211100                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|+|||+++ ++|+++|+++++++++|
T Consensus       233 ~a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~----~rl~v~~~~-~~f~~~l~~~~~~~~~G  307 (477)
T TIGR01722       233 TGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAI----SAAVLVGAA-DEWVPEIRERAEKIRIG  307 (477)
T ss_pred             HHHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCC----eEEEEeCcH-HHHHHHHHHHHhcCCCC
Confidence                                                      0345555    899999999 99999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.++++.+||++++.+.+++.++|+.+.+.|+++.+||.....                                    
T Consensus       308 ~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~------------------------------------  351 (477)
T TIGR01722       308 PGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKV------------------------------------  351 (477)
T ss_pred             CCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC------------------------------------
Confidence            99999999999999999999999999999999999888853100                                    


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                        .....|+|++|||+
T Consensus       352 ------------------------------------------------------------------~~~~~g~~~~Ptvl  365 (477)
T TIGR01722       352 ------------------------------------------------------------------DGYEEGNWVGPTLL  365 (477)
T ss_pred             ------------------------------------------------------------------CCCCCCeEECCEEe
Confidence                                                                              00125789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCCc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAPF  336 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pf  336 (605)
                      .++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++|++++++|.|+||.... ..+.+||
T Consensus       366 ~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pf  445 (477)
T TIGR01722       366 ERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSF  445 (477)
T ss_pred             eCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999997433 3467899


Q ss_pred             cccccCCCc--hHHhHHhhhcccceeEEEe
Q psy1099         337 GGFKESGIG--RELGKAALDEYTELKTVTE  364 (605)
Q Consensus       337 GG~~~SG~G--~~~G~~~~~~~~~~k~~t~  364 (605)
                      ||+|.||+|  +++|.+++++|++.|+++.
T Consensus       446 gG~k~SG~G~~~~~g~~~l~~~~~~k~i~~  475 (477)
T TIGR01722       446 TGWKDSFFGDHHIYGKQGTHFYTRGKTVTT  475 (477)
T ss_pred             CccccccCCCCccChHHHHHHhcCeeEEEE
Confidence            999999999  5789999999999998765

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.98  E-value=5.3e-32  Score=293.29  Aligned_cols=249  Identities=42%  Similarity=0.702  Sum_probs=220.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++.++++++|+|+|++|+++|++..... ++                     
T Consensus       140 ~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  219 (453)
T cd07149         140 VAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIA  219 (453)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999986543110 00                     


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    ++++||+++|++|+++|+++++.+++|+
T Consensus       220 ~~a~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~i~d~f~~~L~~~~~~~~~g~  295 (453)
T cd07149         220 RKAGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISV----QRIFVHEDIYDEFLERFVAATKKLVVGD  295 (453)
T ss_pred             HHcCCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCC----ceEEEcHhHHHHHHHHHHHHHHhCCcCC
Confidence                                                     0345555    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |.++++.+||++++.+.+++.++++.+..+|+++..||.                                         
T Consensus       296 p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~-----------------------------------------  334 (453)
T cd07149         296 PLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGK-----------------------------------------  334 (453)
T ss_pred             CCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCC-----------------------------------------
Confidence            999999999999999988888877777666655555442                                         


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                       .   .++|++|||+.
T Consensus       335 -----------------------------------------------------------------~---~g~~~~Ptvl~  346 (453)
T cd07149         335 -----------------------------------------------------------------R---DGAILEPTVLT  346 (453)
T ss_pred             -----------------------------------------------------------------C---CCeEEcCEEEe
Confidence                                                                             2   36789999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCCcc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAPFG  337 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfG  337 (605)
                      ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||.... ..+.+|||
T Consensus       347 ~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfG  426 (453)
T cd07149         347 DVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYG  426 (453)
T ss_pred             CCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999996543 34678999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEE
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |+|.||+|+++|.++++.|++.|+++
T Consensus       427 G~~~SG~G~~~g~~~~~~~~~~k~~~  452 (453)
T cd07149         427 GVKESGTGREGPRYAIEEMTEIKLVC  452 (453)
T ss_pred             CccccccCCCChHHHHHHhhceeEEe
Confidence            99999999999999999999999874

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=99.98  E-value=7.8e-32  Score=291.71  Aligned_cols=252  Identities=48%  Similarity=0.750  Sum_probs=226.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++..+.++|+++|+|+|++|+++|++......+                      
T Consensus       134 ~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~  213 (451)
T cd07103         134 ITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLM  213 (451)
T ss_pred             HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            4688999999999999999999999999999999999999999999998653211100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    ++++||+++|++|+++|++....+++
T Consensus       214 ~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~i~~~f~~~l~~~~~~~~~  289 (451)
T cd07103         214 AQAADTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCA----NRIYVHESIYDEFVEKLVERVKKLKV  289 (451)
T ss_pred             HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCC----eeEEEcHHHHHHHHHHHHHHHHhccC
Confidence                                                       0356565    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||+++..+.+++.++++.+.++|+++.+||..                                      
T Consensus       290 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~--------------------------------------  331 (451)
T cd07103         290 GNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKR--------------------------------------  331 (451)
T ss_pred             CCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCc--------------------------------------
Confidence            999999999999999999999988888887777777776642                                      


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       332 --------------------------------------------------------------------~~~~g~~~~Pti  343 (451)
T cd07103         332 --------------------------------------------------------------------LGLGGYFYEPTV  343 (451)
T ss_pred             --------------------------------------------------------------------CCCCCcEECCEE
Confidence                                                                                112478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||......+..||
T Consensus       344 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pf  423 (451)
T cd07103         344 LTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPF  423 (451)
T ss_pred             eeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987666778999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.++++.|++.|+++
T Consensus       424 gG~~~SG~G~~~g~~~~~~~~~~k~v~  450 (451)
T cd07103         424 GGVKESGLGREGGKEGLEEYLETKYVS  450 (451)
T ss_pred             CCCccCcCCccchHHHHHHHhceeEEe
Confidence            999999999999999999999999864

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=99.98  E-value=7.6e-32  Score=288.47  Aligned_cols=245  Identities=29%  Similarity=0.424  Sum_probs=215.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      +++++++||++||+||+|||+.+|+++.++.++|.++|+|+|++|+|+|+.+.+..+                       
T Consensus       114 ~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~  193 (431)
T cd07095         114 PNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHR  193 (431)
T ss_pred             HHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999853321100                       


Q ss_pred             --h----------------------------------------hhhcCCcccccceeEeccc-cHHHHHHHHHHHHhcCc
Q psy1099          59 --W----------------------------------------RKSCLSPLAYRSRTYVQED-IYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 --~----------------------------------------~~~~~~~~~~~~~~~v~~~-i~~~~~~~l~~~~~~~~   95 (605)
                        .                                        .|.|.++    +|+|||++ +||+|+++++++..+++
T Consensus       194 ~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~~i~d~f~~~l~~~~~~~~  269 (431)
T cd07095         194 QFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCA----RRLIVPDGAVGDAFLERLVEAAKRLR  269 (431)
T ss_pred             HhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCC----eEEEEcCcchHHHHHHHHHHHHHhCC
Confidence              0                                        0345555    89999999 99999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|++.++.+||+++..+++++.+++++++++|++++.||..                                     
T Consensus       270 ~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~-------------------------------------  312 (431)
T cd07095         270 IGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMER-------------------------------------  312 (431)
T ss_pred             CCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCc-------------------------------------
Confidence            9999999999999999999999988888888888777777642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....++|++||
T Consensus       313 ---------------------------------------------------------------------~~~~g~~~~Pt  323 (431)
T cd07095         313 ---------------------------------------------------------------------LVAGTAFLSPG  323 (431)
T ss_pred             ---------------------------------------------------------------------CCCCCeEEcCE
Confidence                                                                                 11257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC-CcCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-AVVPQA  334 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~-~~~~~~  334 (605)
                      |+ ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||... ...+.+
T Consensus       324 v~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~  402 (431)
T cd07095         324 II-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTA  402 (431)
T ss_pred             EE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence            99 6999999999999999999999999999999999999999999999999999999999999999999643 334668


Q ss_pred             CccccccCCCchHHhHHhhhccc
Q psy1099         335 PFGGFKESGIGRELGKAALDEYT  357 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~~~~~~  357 (605)
                      ||||+|.||+|+++|.++++.|.
T Consensus       403 PfGG~k~SG~G~~~g~~~~~~~~  425 (431)
T cd07095         403 PFGGVGLSGNHRPSAYYAADYCA  425 (431)
T ss_pred             CCCCcccccCCCCChHHHHHHHh
Confidence            99999999999999999988543

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=99.98  E-value=1e-31  Score=292.73  Aligned_cols=253  Identities=34%  Similarity=0.605  Sum_probs=223.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.....                        
T Consensus       171 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~  250 (500)
T cd07083         171 FTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIY  250 (500)
T ss_pred             HHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999986433110                        


Q ss_pred             -----hh------h------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          58 -----YW------R------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        58 -----~~------~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                           .+      .                                    |.|.++    +|+|||+++||+|+++++++
T Consensus       251 ~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~  326 (500)
T cd07083         251 EAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAA----SRLILTQGAYEPVLERLLKR  326 (500)
T ss_pred             HHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCC----eeEEEcHHHHHHHHHHHHHH
Confidence                 00      1                                    234444    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ  170 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~  170 (605)
                      .+++++|+|.+.++.+||+++..+++++.++|+.+.+.| ++.+||..                                
T Consensus       327 ~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~--------------------------------  373 (500)
T cd07083         327 AERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKR--------------------------------  373 (500)
T ss_pred             HHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCc--------------------------------
Confidence            999999999999999999999999999999988887765 66666542                                


Q ss_pred             EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099         171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  250 (605)
Q Consensus       171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~  250 (605)
                                                                                                ....|+
T Consensus       374 --------------------------------------------------------------------------~~~~g~  379 (500)
T cd07083         374 --------------------------------------------------------------------------LEGEGY  379 (500)
T ss_pred             --------------------------------------------------------------------------CCCCCe
Confidence                                                                                      122578


Q ss_pred             eeeeeEeeccCcchhhhhhhhcCceEEeEecC--CHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC
Q psy1099         251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ  328 (605)
Q Consensus       251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~--d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~  328 (605)
                      |++|||+.++++++++++||+||||++|++|+  |+||||+++|+++|||++||||+|.+++.++++++++|+|+||...
T Consensus       380 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~  459 (500)
T cd07083         380 FVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKI  459 (500)
T ss_pred             EEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCC
Confidence            99999999999999999999999999999999  9999999999999999999999999999999999999999999653


Q ss_pred             C--cCCCCCccccccCCCc-hHHhHHhhhcccceeEEEec
Q psy1099         329 A--VVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       329 ~--~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s  365 (605)
                      .  ..+.+||||+|.||+| +.+|.+++++|++.|+++..
T Consensus       460 ~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~  499 (500)
T cd07083         460 TGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER  499 (500)
T ss_pred             CCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence            3  3457899999999999 68889999999999988753

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=99.98  E-value=1.1e-31  Score=293.29  Aligned_cols=251  Identities=37%  Similarity=0.652  Sum_probs=220.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCCh-------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA-------------------------   56 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~-------------------------   56 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++....                         
T Consensus       188 ~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~  267 (514)
T PRK03137        188 MAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIY  267 (514)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998653211                         


Q ss_pred             ----h------hhh------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          57 ----P------YWR------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        57 ----~------~~~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                          .      .+.                                    |.|.++    +|+|||+++|++|+++|+++
T Consensus       268 ~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~v~d~f~~~l~~~  343 (514)
T PRK03137        268 ERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSAC----SRAIVHEDVYDEVLEKVVEL  343 (514)
T ss_pred             HHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccC----eEEEEeHHHHHHHHHHHHHH
Confidence                0      010                                    345555    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ  170 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~  170 (605)
                      ++++++|+|.++. ++||++++.+++++.++|+.+.+. +++.+||..                                
T Consensus       344 ~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~--------------------------------  389 (514)
T PRK03137        344 TKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEG--------------------------------  389 (514)
T ss_pred             HHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCc--------------------------------
Confidence            9999999999998 999999999999998888877665 366555532                                


Q ss_pred             EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099         171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  250 (605)
Q Consensus       171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~  250 (605)
                                                                                                ....|+
T Consensus       390 --------------------------------------------------------------------------~~~~g~  395 (514)
T PRK03137        390 --------------------------------------------------------------------------DDSKGY  395 (514)
T ss_pred             --------------------------------------------------------------------------CCCCce
Confidence                                                                                      123589


Q ss_pred             eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--C
Q psy1099         251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--Q  328 (605)
Q Consensus       251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~  328 (605)
                      |++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..  +
T Consensus       396 ~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~  475 (514)
T PRK03137        396 FIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTG  475 (514)
T ss_pred             EEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999964  3


Q ss_pred             CcCCCCCccccccCCCc-hHHhHHhhhcccceeEEEe
Q psy1099         329 AVVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTE  364 (605)
Q Consensus       329 ~~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~  364 (605)
                      ...+.+||||+|.||+| +++|.++++.|++.|+++.
T Consensus       476 ~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~  512 (514)
T PRK03137        476 AIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSE  512 (514)
T ss_pred             CCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEE
Confidence            33466899999999999 6889999999999998865

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=99.98  E-value=1.4e-31  Score=290.85  Aligned_cols=251  Identities=36%  Similarity=0.507  Sum_probs=222.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|+++.++.++|+++|+|+|++|+++|++......                       
T Consensus       158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  237 (473)
T cd07082         158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK  237 (473)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            468899999999999999999999999999999999999999999999865431110                       


Q ss_pred             ----h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          59 ----W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        59 ----~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                          +                                    .|.|.++    +++|||+++|++|+++|.++++++++|+
T Consensus       238 ~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~~v~v~~~i~d~f~~~l~~~~~~~~~g~  313 (473)
T cd07082         238 KQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAI----KRVLVHESVADELVELLKEEVAKLKVGM  313 (473)
T ss_pred             HHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCC----eEEEEcHHHHHHHHHHHHHHHhcCCCCC
Confidence                0                                    0356666    8999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |.+.++.+||++++.+++++.++++.+.+.|+++..||.                                         
T Consensus       314 ~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~-----------------------------------------  352 (473)
T cd07082         314 PWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGG-----------------------------------------  352 (473)
T ss_pred             CCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCc-----------------------------------------
Confidence            999999999999999988888888777666666655553                                         


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                       ..  .++|+.||++.
T Consensus       353 -----------------------------------------------------------------~~--~g~~~~Ptvl~  365 (473)
T cd07082         353 -----------------------------------------------------------------RE--GGNLIYPTLLD  365 (473)
T ss_pred             -----------------------------------------------------------------cC--CCeEEeeEEEe
Confidence                                                                             21  37899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCCCcc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFG  337 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfG  337 (605)
                      ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||..... .+.+|||
T Consensus       366 ~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfG  445 (473)
T cd07082         366 PVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFL  445 (473)
T ss_pred             cCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999975433 3568999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |+|.||+|+++|.++++.|++.|+++.
T Consensus       446 G~k~SG~g~~~g~~~l~~~~~~k~i~~  472 (473)
T cd07082         446 GRKDSGIGTQGIGDALRSMTRRKGIVI  472 (473)
T ss_pred             cccccccCCCChHHHHHHhhceeEEEE
Confidence            999999999999999999999998764

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=99.98  E-value=1.5e-31  Score=289.60  Aligned_cols=256  Identities=46%  Similarity=0.781  Sum_probs=228.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|++++++.++|+++|+|+|++|+++|++.+....+                      
T Consensus       134 ~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~  213 (455)
T cd07093         134 LTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIM  213 (455)
T ss_pred             HHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHH
Confidence            4679999999999999999999999999999999999999999999998643321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    ++++||+++|++|+++|+++++.+++
T Consensus       214 ~~aa~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~----~~v~v~~~i~d~f~~~l~~~~~~~~~  289 (455)
T cd07093         214 RAAAPNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAG----SRILVQRSIYDEFLERFVERAKALKV  289 (455)
T ss_pred             HHHhhcccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCC----ceEEEcHHHHHHHHHHHHHHHHhCCC
Confidence                                                       0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++.+||+++..+.+++.++|+.+.+.|+++.+||.....                                   
T Consensus       290 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-----------------------------------  334 (455)
T cd07093         290 GDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPEL-----------------------------------  334 (455)
T ss_pred             CCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcccc-----------------------------------
Confidence            999999999999999999999999999998888888888854100                                   


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....++|++|||
T Consensus       335 -------------------------------------------------------------------~~~~~~~~~~Ptv  347 (455)
T cd07093         335 -------------------------------------------------------------------PDLEGGYFVEPTV  347 (455)
T ss_pred             -------------------------------------------------------------------ccCCCCceECCEE
Confidence                                                                               0012478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       348 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pf  427 (455)
T cd07093         348 ITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPF  427 (455)
T ss_pred             EecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999986666678999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.++++.|++.|+++
T Consensus       428 gG~~~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07093         428 GGVKASGIGREGGDYSLEFYTELKNVC  454 (455)
T ss_pred             CCCccCcCCCCchHHHHHHHhceeEEe
Confidence            999999999999999999999999875

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-31  Score=291.24  Aligned_cols=260  Identities=25%  Similarity=0.365  Sum_probs=221.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcC-CCCccEEEecCCCCCCh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPGYGPMSA------------------------   56 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aG-lP~gvv~vv~g~~~~~~------------------------   56 (605)
                      ++|++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|+++...                        
T Consensus       165 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l~~v~~v~fTGS~~~G~~v~~~  244 (521)
T PRK11903        165 LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHLQPFDVVSFTGSAETAAVLRSH  244 (521)
T ss_pred             HHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcccCCCEEEEECCHHHHHHHHhh
Confidence            46899999999999999999999999999999999999 99999999998542110                        


Q ss_pred             ----h---------------------h-----h---------------hhhcCCcccccceeEeccccHHHHHHHHHHHH
Q psy1099          57 ----P---------------------Y-----W---------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA   91 (605)
Q Consensus        57 ----~---------------------~-----~---------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~   91 (605)
                          .                     .     +               .|.|.++    +|+|||+++||+|+++|++++
T Consensus       245 aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~----~rv~V~~~i~d~f~~~L~~~~  320 (521)
T PRK11903        245 PAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAI----RRIFVPEALYDAVAEALAARL  320 (521)
T ss_pred             hhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCC----eEEEEehhHHHHHHHHHHHHH
Confidence                0                     0     0               1346565    899999999999999999999


Q ss_pred             hcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeE
Q psy1099          92 AARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT  171 (605)
Q Consensus        92 ~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~  171 (605)
                      +++++|+|++.++.+||+++..+++++.++|+. ..+|+++++||.....                              
T Consensus       321 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~------------------------------  369 (521)
T PRK11903        321 AKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFAL------------------------------  369 (521)
T ss_pred             HhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCC------------------------------
Confidence            999999999999999999999999999999985 4568888888753100                              


Q ss_pred             EEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCee
Q psy1099         172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYF  251 (605)
Q Consensus       172 ~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~  251 (605)
                                                                                            .......|+|
T Consensus       370 ----------------------------------------------------------------------~~~~~~~g~~  379 (521)
T PRK11903        370 ----------------------------------------------------------------------VDADPAVAAC  379 (521)
T ss_pred             ----------------------------------------------------------------------CCCCCCCCeE
Confidence                                                                                  0000124789


Q ss_pred             eeeeEeeccCc--chhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHh--hcccEEEecc
Q psy1099         252 IEPTVFSNVTD--DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI--NAGSVWINCY  327 (605)
Q Consensus       252 ~~Ptvl~~v~~--~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~--~~g~v~iN~~  327 (605)
                      ++|||+.++.+  ++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++  ++|+|+||..
T Consensus       380 ~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~  459 (521)
T PRK11903        380 VGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISP  459 (521)
T ss_pred             EcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCc
Confidence            99999987654  4789999999999999999999999999999999999999999999999999999  8999999963


Q ss_pred             C---------CcCCCCCccccccCCCchHHh-HHhhhcccceeEEEecC
Q psy1099         328 Q---------AVVPQAPFGGFKESGIGRELG-KAALDEYTELKTVTESP  366 (605)
Q Consensus       328 ~---------~~~~~~pfGG~~~SG~G~~~G-~~~~~~~~~~k~~t~s~  366 (605)
                      .         ...+.+||||+|.||+|++.| .+++++|++.+++..++
T Consensus       460 ~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~~~  508 (521)
T PRK11903        460 DVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQASP  508 (521)
T ss_pred             ccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceeeCCH
Confidence            2         234678999999999999854 78999999988877764

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=99.97  E-value=3.2e-31  Score=284.60  Aligned_cols=248  Identities=35%  Similarity=0.518  Sum_probs=219.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCC----hhhh------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMS----APYW------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~----~~~~------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+++|+.+..    ..++                  
T Consensus       115 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~  194 (432)
T cd07105         115 GTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGR  194 (432)
T ss_pred             HHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHH
Confidence            468899999999999999999999999999999999999999999999854211    0000                  


Q ss_pred             ----------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          60 ----------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        60 ----------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                                                                    .|.|.++    ++++||+++|++|+++|.++.++
T Consensus       195 ~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~i~~~f~~~l~~~~~~  270 (432)
T cd07105         195 IIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMST----ERIIVHESIADEFVEKLKAAAEK  270 (432)
T ss_pred             HHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----ceEEEcHHHHHHHHHHHHHHHHh
Confidence                                                          0345555    89999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|     ++++||++++.+++++.++|+.+.++|+++..||...                                  
T Consensus       271 ~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~----------------------------------  311 (432)
T cd07105         271 LFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD----------------------------------  311 (432)
T ss_pred             hcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----------------------------------
Confidence            9998     6899999999999999999888888888877776431                                  


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                             ....++|+.
T Consensus       312 -----------------------------------------------------------------------~~~~~~~~~  320 (432)
T cd07105         312 -----------------------------------------------------------------------ESPSGTSMP  320 (432)
T ss_pred             -----------------------------------------------------------------------CCCCCeEEe
Confidence                                                                                   002478999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CC
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VP  332 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~  332 (605)
                      |||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+|+||..... .+
T Consensus       321 Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~  400 (432)
T cd07105         321 PTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEP  400 (432)
T ss_pred             eEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999975433 57


Q ss_pred             CCCccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         333 QAPFGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       333 ~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      .+||||+|.||+|+++|.++++.|++.|+++
T Consensus       401 ~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~  431 (432)
T cd07105         401 TLPHGGVKSSGYGRFNGKWGIDEFTETKWIT  431 (432)
T ss_pred             CCCCCCcccccccccChHHHHHHhhceEEEe
Confidence            8999999999999999999999999999875

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=99.97  E-value=5e-31  Score=286.50  Aligned_cols=252  Identities=27%  Similarity=0.393  Sum_probs=218.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|+|+.+.+..++                      
T Consensus       149 ~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~  228 (484)
T TIGR03240       149 PNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHR  228 (484)
T ss_pred             HHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998533211000                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccH-HHHHHHHHHHHhcCc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIY-DTFVKKAVEKAAARK   95 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~-~~~~~~l~~~~~~~~   95 (605)
                                                                 .|.|.++    +|+|||++++ |+|+++|++.+.+++
T Consensus       229 ~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~~~~d~f~~~l~~~~~~~~  304 (484)
T TIGR03240       229 QFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCA----RRLLVPDGAQGDAFLARLVEVAERLT  304 (484)
T ss_pred             HhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----cEEEEeccccHHHHHHHHHHHHHhcc
Confidence                                                       0345554    8999999985 999999999999999


Q ss_pred             cCCC-CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          96 VGDP-FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        96 vg~~-~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      +|+| .++++.+||+++..+++++.++++++.++|+++.+||..                                    
T Consensus       305 ~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~------------------------------------  348 (484)
T TIGR03240       305 VGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQ------------------------------------  348 (484)
T ss_pred             cCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCc------------------------------------
Confidence            9997 578899999999999999999988888877777666532                                    


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                            ....++|++|
T Consensus       349 ----------------------------------------------------------------------~~~~~~~i~P  358 (484)
T TIGR03240       349 ----------------------------------------------------------------------LDPGAALLTP  358 (484)
T ss_pred             ----------------------------------------------------------------------CCCCCEEEcC
Confidence                                                                                  1124689999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC-CcCCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-AVVPQ  333 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~-~~~~~  333 (605)
                      ||+ ++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||... ...+.
T Consensus       359 Tvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~  437 (484)
T TIGR03240       359 GII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSA  437 (484)
T ss_pred             EEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCC
Confidence            999 6999999999999999999999999999999999999999999999999999999999999999999643 34567


Q ss_pred             CCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         334 APFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +||||+|.||+|++.|..+++ |++.|+++..
T Consensus       438 ~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~  468 (484)
T TIGR03240       438 APFGGIGASGNHRPSAYYAAD-YCAYPVASLE  468 (484)
T ss_pred             CCcCCcccccCCCCCchHHHh-heeeeEEEEe
Confidence            899999999999999977655 8888887765

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>KOG2452|consensus

Probab=99.97  E-value=3e-31  Score=264.11  Aligned_cols=189  Identities=44%  Similarity=0.803  Sum_probs=170.3

Q ss_pred             ceeEeccccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceE
Q psy1099          71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  150 (605)
Q Consensus        71 ~~~~v~~~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~v  150 (605)
                      +|+||.++|.|+|+.++++.++++++|+|+|.+++-||.....+..++.++++.+++.|+++++||+             
T Consensus       690 gr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~-------------  756 (881)
T KOG2452|consen  690 GRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGN-------------  756 (881)
T ss_pred             cceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCc-------------
Confidence            8999999999999999999999999999999999999987766666666666666555555555554             


Q ss_pred             eccCCCchhhhccccccceeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhh
Q psy1099         151 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKS  230 (605)
Q Consensus       151 v~~~~~~~~~~~~~ifgp~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~  230 (605)
                                                                                                      
T Consensus       757 --------------------------------------------------------------------------------  756 (881)
T KOG2452|consen  757 --------------------------------------------------------------------------------  756 (881)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecC--CHHHHHHhhcCCCcceeEEEecCChH
Q psy1099         231 GVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNID  308 (605)
Q Consensus       231 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~--d~~eai~~~n~~~~glaa~vft~d~~  308 (605)
                                   +...+|+|++||+++++..+|-+..||.||||+.|.+|+  |+|+.++.+|+++|||+++|||+|..
T Consensus       757 -------------~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~  823 (881)
T KOG2452|consen  757 -------------QVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDIN  823 (881)
T ss_pred             -------------cCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccc
Confidence                         445689999999999999999999999999999999996  57899999999999999999999999


Q ss_pred             HHHHHHHHhhcccEEEeccCCcCCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         309 TANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       309 ~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      .+.+++..+++|+|+||++...+-..||||+|+||+|..+|...+.+|...|++|..
T Consensus       824 k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~e  880 (881)
T KOG2452|consen  824 KALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE  880 (881)
T ss_pred             hhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence            999999999999999999888888899999999999999999999999999998753

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=99.97  E-value=2.7e-31  Score=284.92  Aligned_cols=246  Identities=26%  Similarity=0.411  Sum_probs=213.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++.++++++ +|+|++|+++|+++....++                      
T Consensus       117 ~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~vv~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~  195 (443)
T cd07132         117 TLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYPVVLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQA  195 (443)
T ss_pred             HHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHH
Confidence            5789999999999999999999999999999999995 99999999998643311100                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|++||+++||+|++++++.++.++.|+
T Consensus       196 a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g~  271 (443)
T cd07132         196 AAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAP----DYVLCTPEVQEKFVEALKKTLKEFYGED  271 (443)
T ss_pred             HHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCC----cEEEEcHHHHHHHHHHHHHHHHHhcCCC
Confidence                                                     0355555    8999999999999999999999999888


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      | +.++++||+++..+++++.++++.     +++.+|                                           
T Consensus       272 ~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~g-------------------------------------------  302 (443)
T cd07132         272 P-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIG-------------------------------------------  302 (443)
T ss_pred             C-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeC-------------------------------------------
Confidence            8 788999999999888877666542     134333                                           


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                     |... ..++|++|||+.
T Consensus       303 ---------------------------------------------------------------g~~~-~~~~~~~Ptvl~  318 (443)
T cd07132         303 ---------------------------------------------------------------GQTD-EKERYIAPTVLT  318 (443)
T ss_pred             ---------------------------------------------------------------CccC-CCCCEEeeEEEe
Confidence                                                                           3321 247899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcCCCCCc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQAPF  336 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~~~~pf  336 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||...  ...+.+||
T Consensus       319 ~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~Pf  398 (443)
T cd07132         319 DVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPF  398 (443)
T ss_pred             CCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999654  33477999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|.||+|+++|.++++.|++.|+++..
T Consensus       399 GG~k~SG~G~~~g~~~l~~~~~~k~v~~~  427 (443)
T cd07132         399 GGVGNSGMGAYHGKYSFDTFSHKRSCLVK  427 (443)
T ss_pred             CCCCcccCCCcccHHHHHHhccccEEEEc
Confidence            99999999999999999999999988765

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=99.97  E-value=9.3e-31  Score=286.21  Aligned_cols=251  Identities=33%  Similarity=0.493  Sum_probs=219.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      +++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|+++.....                       
T Consensus       184 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~  263 (518)
T cd07125         184 FTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLIN  263 (518)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999865421100                       


Q ss_pred             ---------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          59 ---------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        59 ---------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                               +                                    .|.|.++    +|++||+++|++|++++++++..
T Consensus       264 ~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~  339 (518)
T cd07125         264 RALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSAL----RLLYLQEEIAERFIEMLKGAMAS  339 (518)
T ss_pred             HHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----eEEEEcchhHHHHHHHHHHHHhc
Confidence                     0                                    0346555    89999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|.+.++.+||++++.+++++..+++.+.+. +++..||.                                    
T Consensus       340 ~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-~~vl~gg~------------------------------------  382 (518)
T cd07125         340 LKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAP------------------------------------  382 (518)
T ss_pred             CCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC-CEEEeCCC------------------------------------
Confidence            99999999999999999999999998888877653 45555542                                    


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                            .....++|++
T Consensus       383 ----------------------------------------------------------------------~~~~~g~~~~  392 (518)
T cd07125         383 ----------------------------------------------------------------------LDDGNGYFVA  392 (518)
T ss_pred             ----------------------------------------------------------------------cCCCCCeEEc
Confidence                                                                                  1112578999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecC--CHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC--
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA--  329 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~--d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~--  329 (605)
                      |||+.++  +|++++||+||||++|++|+  |+||||+++|+++|||++||||+|.++++++++++++|.|+||....  
T Consensus       393 Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~  470 (518)
T cd07125         393 PGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGA  470 (518)
T ss_pred             cEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCC
Confidence            9999988  89999999999999999999  99999999999999999999999999999999999999999996543  


Q ss_pred             cCCCCCccccccCCCch-HHhHHhhhcccceeEEEec
Q psy1099         330 VVPQAPFGGFKESGIGR-ELGKAALDEYTELKTVTES  365 (605)
Q Consensus       330 ~~~~~pfGG~~~SG~G~-~~G~~~~~~~~~~k~~t~s  365 (605)
                      ..+.+||||+|.||+|+ .+|.++++.|++.|+++..
T Consensus       471 ~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~  507 (518)
T cd07125         471 IVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLN  507 (518)
T ss_pred             CCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEE
Confidence            34678999999999995 6789999999999988764

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=99.97  E-value=3.3e-30  Score=279.58  Aligned_cols=250  Identities=33%  Similarity=0.478  Sum_probs=216.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      +++++++||++||+||+|||+++|+++..+.+++.++|+|+|++|+|+|++.....                        
T Consensus       177 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~  256 (500)
T TIGR01238       177 FTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLIN  256 (500)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999986532110                        


Q ss_pred             -----hh---------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          58 -----YW---------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        58 -----~~---------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                           .+                                       .|.|.++    +|++||+++|++|+++|++++++
T Consensus       257 ~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~----~rv~V~~~i~d~f~~~L~~~~~~  332 (500)
T TIGR01238       257 QTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSAL----RVLCVQEDVADRVLTMIQGAMQE  332 (500)
T ss_pred             HHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----ceeEEcHhhHHHHHHHHHHHHHh
Confidence                 00                                       0345554    89999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|++.++.+||++++.+++++.++|+.+.+.|+++..++..                                   
T Consensus       333 ~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~-----------------------------------  377 (500)
T TIGR01238       333 LKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLD-----------------------------------  377 (500)
T ss_pred             CCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccC-----------------------------------
Confidence            999999999999999999999999999999998888876543321                                   


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                          +......|+|++
T Consensus       378 --------------------------------------------------------------------~~~~~~~g~f~~  389 (500)
T TIGR01238       378 --------------------------------------------------------------------DSRACQHGTFVA  389 (500)
T ss_pred             --------------------------------------------------------------------CCCCCCCCeeEc
Confidence                                                                                000012588999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecC--CHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC--
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA--  329 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~--d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~--  329 (605)
                      |||+.+  +++.+++||+||||++|++|+  |+||||+++|+++|||++||||+|.+++.++++++++|+|+||....  
T Consensus       390 PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~  467 (500)
T TIGR01238       390 PTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGA  467 (500)
T ss_pred             CEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCC
Confidence            999984  688899999999999999998  79999999999999999999999999999999999999999996443  


Q ss_pred             cCCCCCccccccCCCc-hHHhHHhhhccccee
Q psy1099         330 VVPQAPFGGFKESGIG-RELGKAALDEYTELK  360 (605)
Q Consensus       330 ~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k  360 (605)
                      ..+.+||||+|.||+| +++|.+++++|++.|
T Consensus       468 ~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k  499 (500)
T TIGR01238       468 VVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ  499 (500)
T ss_pred             CCCCCCCCccccccCCCccCCHHHHHHHHhhc
Confidence            3356799999999999 799999999998765

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>KOG2454|consensus

Probab=99.97  E-value=7.6e-31  Score=255.76  Aligned_cols=257  Identities=28%  Similarity=0.499  Sum_probs=222.3

Q ss_pred             ccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHc----CCCCccEEEecCCCCCChhh--------------------
Q psy1099           3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGPMSAPY--------------------   58 (605)
Q Consensus         3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~a----GlP~gvv~vv~g~~~~~~~~--------------------   58 (605)
                      +..+++||.+||++|+|.||++.+++....++++.+    |-|++++|++++-++.+..+                    
T Consensus       206 lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~  285 (583)
T KOG2454|consen  206 LGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKM  285 (583)
T ss_pred             hhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHH
Confidence            457899999999999999999999998877776554    99999999998876543211                    


Q ss_pred             --------hh------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099          59 --------WR------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR   94 (605)
Q Consensus        59 --------~~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~   94 (605)
                              +.                                    |.|+.    ..|++||+++||.|+..+..+++.+
T Consensus       286 i~~~AAk~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiG----iER~iv~k~~Yd~~i~~l~~rv~s~  361 (583)
T KOG2454|consen  286 IMRNAAKTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIG----IERFIVHKDIYDAFIGQLTKRVKSV  361 (583)
T ss_pred             HHHhhhhhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccc----eeEEEEecchHHHHHHHHHHHHHHH
Confidence                    00                                    12322    3899999999999999999999999


Q ss_pred             ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      +.|.++....+||.+++...++.+..+|++|+++|+++..||.+..                                  
T Consensus       362 r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~----------------------------------  407 (583)
T KOG2454|consen  362 RAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFG----------------------------------  407 (583)
T ss_pred             HcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccC----------------------------------
Confidence            9999999999999999999999999999999888888888886511                                  


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                          ......|.|++|
T Consensus       408 --------------------------------------------------------------------Hpkyp~g~YF~P  419 (583)
T KOG2454|consen  408 --------------------------------------------------------------------HPKYPVGQYFPP  419 (583)
T ss_pred             --------------------------------------------------------------------CCCCCcccccCC
Confidence                                                                                001135789999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQ  333 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~  333 (605)
                      |++.+++++|.|++||.||||++|+++++.|++|+++|+++|||.++||+.|.++.++++.++++|+|-||..... .-+
T Consensus       420 TlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQ  499 (583)
T KOG2454|consen  420 TLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQ  499 (583)
T ss_pred             eEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheec
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999975433 467


Q ss_pred             CCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         334 APFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +||||.+.||+|+..|.+++......|++.-.
T Consensus       500 lPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd  531 (583)
T KOG2454|consen  500 LPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD  531 (583)
T ss_pred             cccCCccCCCccccccHHHHHHHhcccceecc
Confidence            99999999999999999999988888877554

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=99.97  E-value=4.9e-30  Score=274.58  Aligned_cols=244  Identities=29%  Similarity=0.474  Sum_probs=210.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++|++ |+|+|++|+++|+.+....++                      
T Consensus       117 ~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~vv~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~  195 (426)
T cd07087         117 ALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVAVVEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEA  195 (426)
T ss_pred             HHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEEEEeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHH
Confidence            468999999999999999999999999999999999 699999999998643211000                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +++|||+++||+|+++|++..+.++.++
T Consensus       196 a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~f~~~L~~~~~~l~~~~  271 (426)
T cd07087         196 AAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAP----DYVLVHESIKDELIEELKKAIKEFYGED  271 (426)
T ss_pred             HHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccC----CEEEEcHHHHHHHHHHHHHHHHHHcCCC
Confidence                                                     0345555    8999999999999999999999998766


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      | +..+.+||+++..+.+++.++++.+     ++.+||                                          
T Consensus       272 ~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg------------------------------------------  303 (426)
T cd07087         272 P-KESPDYGRIINERHFDRLASLLDDG-----KVVIGG------------------------------------------  303 (426)
T ss_pred             C-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCC------------------------------------------
Confidence            6 4689999999999988887766543     344443                                          


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                      .. ...++|++|||+.
T Consensus       304 ----------------------------------------------------------------~~-~~~g~~~~Ptvl~  318 (426)
T cd07087         304 ----------------------------------------------------------------QV-DKEERYIAPTILD  318 (426)
T ss_pred             ----------------------------------------------------------------cc-CCCCCEEeeEEEe
Confidence                                                                            22 1247899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcCCCCCc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQAPF  336 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~~~~pf  336 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||...  ...+..||
T Consensus       319 ~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~Pf  398 (426)
T cd07087         319 DVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPF  398 (426)
T ss_pred             cCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999653  33578999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEE
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||+|.||+|+++|.+++++|+..|+++
T Consensus       399 GG~k~SG~G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         399 GGVGNSGMGAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             CCCCcccCCCccCHHHHHHhccceeec
Confidence            999999999999999999999998764

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.96  E-value=2.7e-29  Score=289.62  Aligned_cols=253  Identities=36%  Similarity=0.495  Sum_probs=220.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||++||+++.+++++|+++|+|+|++|+|+|+++.....+                      
T Consensus       701 ~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~  780 (1038)
T PRK11904        701 FLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIIN  780 (1038)
T ss_pred             HHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHH
Confidence            4679999999999999999999999999999999999999999999999765321100                      


Q ss_pred             ----------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          60 ----------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        60 ----------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                                                                    .|.|.++    +++|||+++||+|+++|++.+++
T Consensus       781 ~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~----~rl~V~~si~d~fl~~L~~~~~~  856 (1038)
T PRK11904        781 RTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSAL----RVLFVQEDIADRVIEMLKGAMAE  856 (1038)
T ss_pred             HHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccC----cEEEEeHHHHHHHHHHHHHHHHh
Confidence                                                          0345555    89999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|.+.++++||+|++.+++++.++|+.+.+ |+++..||..+.                                 
T Consensus       857 l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~---------------------------------  902 (1038)
T PRK11904        857 LKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPA---------------------------------  902 (1038)
T ss_pred             ccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCC---------------------------------
Confidence            9999999999999999999999999999988765 667777664210                                 


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                             ....|+|+.
T Consensus       903 -----------------------------------------------------------------------~~~~G~fv~  911 (1038)
T PRK11904        903 -----------------------------------------------------------------------GTENGHFVA  911 (1038)
T ss_pred             -----------------------------------------------------------------------CCCCceEEe
Confidence                                                                                   012589999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecC--CHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--CC
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--QA  329 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~--d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~~  329 (605)
                      |||+..  +++.+++||+|||||+|++|+  |+||||+++|+++|||+++|||+|.+.+.++++++++|+||||..  +.
T Consensus       912 PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga  989 (1038)
T PRK11904        912 PTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGA  989 (1038)
T ss_pred             eEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccC
Confidence            999863  577889999999999999998  799999999999999999999999999999999999999999964  33


Q ss_pred             cCCCCCccccccCCCc-hHHhHHhhhcccceeEEEec
Q psy1099         330 VVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       330 ~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ..+..||||+|.||+| +.+|.+++..|++.|+++..
T Consensus       990 ~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~ 1026 (1038)
T PRK11904        990 VVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVN 1026 (1038)
T ss_pred             CCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEc
Confidence            4567899999999999 57889999999999998875

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=99.96  E-value=7.3e-29  Score=267.52  Aligned_cols=252  Identities=51%  Similarity=0.832  Sum_probs=225.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-h----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-Y----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|.++.+++++|+++|+|++++++++|+++.... +                      
T Consensus       113 ~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~  192 (432)
T cd07078         113 AAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIM  192 (432)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999986542110 0                      


Q ss_pred             --h----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          59 --W----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        59 --~----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                        .                                        .|.|.++    ++++||++++++|+++|.+.++.+++
T Consensus       193 ~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~----~~i~v~~~~~~~~~~~L~~~l~~~~~  268 (432)
T cd07078         193 RAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAA----SRLLVHESIYDEFVERLVERVKALKV  268 (432)
T ss_pred             HHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCC----ceEEEcHHHHHHHHHHHHHHHHccCc
Confidence              0                                        0345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|++.++.+||+++....+++.++|+++.++|+++.+||...                                     
T Consensus       269 g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~-------------------------------------  311 (432)
T cd07078         269 GNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRL-------------------------------------  311 (432)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC-------------------------------------
Confidence            9999999999999999999999988888877777777766431                                     


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCC-CCeeeeee
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPT  255 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Pt  255 (605)
                                                                                           .. .++|++||
T Consensus       312 ---------------------------------------------------------------------~~~~g~~~~Pt  322 (432)
T cd07078         312 ---------------------------------------------------------------------EGGKGYFVPPT  322 (432)
T ss_pred             ---------------------------------------------------------------------CCCCCcEEccE
Confidence                                                                                 11 47899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQA  334 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~  334 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|+|+||..... .+..
T Consensus       323 v~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~  402 (432)
T cd07078         323 VLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSA  402 (432)
T ss_pred             EEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999976555 7899


Q ss_pred             CccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         335 PFGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      ||||.+.||+|+++|.++++.|++.|+++
T Consensus       403 pfgG~~~sg~g~~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         403 PFGGVKQSGIGREGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             CcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence            99999999999999999999999998875

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.96  E-value=3.3e-28  Score=283.65  Aligned_cols=254  Identities=31%  Similarity=0.463  Sum_probs=221.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      +++++++||++||+||+|||+++|+++..++++|+++|+|+|++|+|+|++++....                       
T Consensus       693 ~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~  772 (1208)
T PRK11905        693 FTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQ  772 (1208)
T ss_pred             HHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHH
Confidence            467899999999999999999999999999999999999999999999976532100                       


Q ss_pred             ------h---------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          59 ------W---------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        59 ------~---------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                            +                                       .|.|.++    +++|||+++||+|+++|++.+++
T Consensus       773 ~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~----~rl~V~~si~d~f~e~L~~~~~~  848 (1208)
T PRK11905        773 RTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSAL----RVLCLQEDVADRVLTMLKGAMDE  848 (1208)
T ss_pred             HHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccC----cEEEEehhHHHHHHHHHHHHHHH
Confidence                  0                                       0345555    89999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|.+.++++||+|++.+++++.++|+.+.+.|+++..|+...                                  
T Consensus       849 l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~----------------------------------  894 (1208)
T PRK11905        849 LRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPA----------------------------------  894 (1208)
T ss_pred             hcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCC----------------------------------
Confidence            9999999999999999999999999999999888887765544210                                  


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                             ....|+|++
T Consensus       895 -----------------------------------------------------------------------~~~~G~fv~  903 (1208)
T PRK11905        895 -----------------------------------------------------------------------ETEKGTFVA  903 (1208)
T ss_pred             -----------------------------------------------------------------------CCCCCeEEe
Confidence                                                                                   012589999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecC--CHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--CC
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--QA  329 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~--d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~~  329 (605)
                      |||+. + +++.+++||+|||||+|++|+  |+||+|+++|+++|||+++|||+|.+.+.++.+++++|+||||..  +.
T Consensus       904 PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga  981 (1208)
T PRK11905        904 PTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGA  981 (1208)
T ss_pred             eEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCC
Confidence            99997 3 578899999999999999997  799999999999999999999999999999999999999999964  33


Q ss_pred             cCCCCCccccccCCCch-HHhHHhhhcccceeEEEecC
Q psy1099         330 VVPQAPFGGFKESGIGR-ELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       330 ~~~~~pfGG~~~SG~G~-~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ..+.+||||+|.||+|. .+|.+++..|+..|+++..+
T Consensus       982 ~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905        982 VVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIPP 1019 (1208)
T ss_pred             ccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeeccc
Confidence            45678999999999994 88999999999999887553

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=99.95  E-value=1.3e-27  Score=257.20  Aligned_cols=240  Identities=22%  Similarity=0.305  Sum_probs=199.0

Q ss_pred             CcccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh---------------------
Q psy1099           1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------   59 (605)
Q Consensus         1 ~~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------   59 (605)
                      +++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|+++.+..++                     
T Consensus       158 l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~  237 (489)
T cd07126         158 IPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLA  237 (489)
T ss_pred             HHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999998654321110                     


Q ss_pred             -----------------------------------------hhhcCCcccccceeEecccc-HHHHHHHHHHHHhcCccC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDI-YDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i-~~~~~~~l~~~~~~~~vg   97 (605)
                                                               .|.|.++    +|+|||+++ +|+|++++++.+.++++|
T Consensus       238 ~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~----~rv~V~~~i~~d~f~~~l~~~~~~~~~g  313 (489)
T cd07126         238 LELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQ----SILFAHENWVQAGILDKLKALAEQRKLE  313 (489)
T ss_pred             HHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCC----ceEEEeCcchHHHHHHHHHHHHHhcccC
Confidence                                                     1344444    899999995 699999999999999986


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHH-cCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~-~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                           ++.+||+++.. .+++.++|+.+++ +|+++.+||..+..                                   
T Consensus       314 -----~~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~-----------------------------------  352 (489)
T cd07126         314 -----DLTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTN-----------------------------------  352 (489)
T ss_pred             -----CCcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCccccc-----------------------------------
Confidence                 35889999998 8999999999887 78888888753100                                   


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCC-eeeeee
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG-YFIEPT  255 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g-~~~~Pt  255 (605)
                                                                                         .....+ .|++||
T Consensus       353 -------------------------------------------------------------------~~~~~~~~~~~PT  365 (489)
T cd07126         353 -------------------------------------------------------------------HSIPSIYGAYEPT  365 (489)
T ss_pred             -------------------------------------------------------------------ccccCCcceecCe
Confidence                                                                               000122 278999


Q ss_pred             Eeec------cCcchhhhhhhhcCceEEeEecCC--HHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhccc--EEEe
Q psy1099         256 VFSN------VTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS--VWIN  325 (605)
Q Consensus       256 vl~~------v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~--v~iN  325 (605)
                      |+..      ++++|++++||+||||++|++|+|  +||||+++|+++|||++||||+|.++++++++++++|+  |+||
T Consensus       366 vl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n  445 (489)
T cd07126         366 AVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIR  445 (489)
T ss_pred             EEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEec
Confidence            9842      678999999999999999999999  99999999999999999999999999999999999999  5577


Q ss_pred             ccCCcCCC----CCccccccCCCchHHhHHh
Q psy1099         326 CYQAVVPQ----APFGGFKESGIGRELGKAA  352 (605)
Q Consensus       326 ~~~~~~~~----~pfGG~~~SG~G~~~G~~~  352 (605)
                      ......+.    .||||+|+||+|++.....
T Consensus       446 ~~~~~~~~~~~~~pfgg~k~sg~g~~~~~~~  476 (489)
T cd07126         446 ARTTGAPQNHWFGPAGDPRGAGIGTPEAIRL  476 (489)
T ss_pred             CCCCCCCcccCcCCCCCCcccCCCCHhHHHh
Confidence            54444333    8999999999999865543

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.95  E-value=8.5e-28  Score=279.47  Aligned_cols=250  Identities=31%  Similarity=0.474  Sum_probs=215.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      +++++++||++||+||+||||+||+++..++++|+++|+|+|++|+|+|+++....                        
T Consensus       785 ~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~  864 (1318)
T PRK11809        785 FTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQ  864 (1318)
T ss_pred             HHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999997653210                        


Q ss_pred             -----hh------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          58 -----YW------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        58 -----~~------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                           .+                                          .|.|.+.    +++|||++|||+|+++|+..
T Consensus       865 ~~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~----~rl~V~e~Iad~fl~~L~~a  940 (1318)
T PRK11809        865 RNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSAL----RVLCLQDDVADRTLKMLRGA  940 (1318)
T ss_pred             HHHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccC----cEEEEcHHHHHHHHHHHHHH
Confidence                 01                                          0345554    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ  170 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~  170 (605)
                      ++.+++|+|.+.++++||+|+..+.+++..+|+.+.+.|+++..|+....                              
T Consensus       941 ~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~------------------------------  990 (1318)
T PRK11809        941 MAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENS------------------------------  990 (1318)
T ss_pred             HHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCC------------------------------
Confidence            99999999999999999999999999999999999888888776653210                              


Q ss_pred             EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099         171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  250 (605)
Q Consensus       171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~  250 (605)
                                                                                               .....|+
T Consensus       991 -------------------------------------------------------------------------~~~~~G~  997 (1318)
T PRK11809        991 -------------------------------------------------------------------------EDWQSGT  997 (1318)
T ss_pred             -------------------------------------------------------------------------CCCCCCe
Confidence                                                                                     0012589


Q ss_pred             eeeeeEeeccCcchhhhhhhhcCceEEeEecC--CHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC
Q psy1099         251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ  328 (605)
Q Consensus       251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~--d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~  328 (605)
                      |++|||+..  +++.+++||+|||||+|++|+  |+||+|+++|+++|||+++|||+|.+++.++++++++|+||||...
T Consensus       998 fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~ 1075 (1318)
T PRK11809        998 FVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNM 1075 (1318)
T ss_pred             EEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCC
Confidence            999999974  568889999999999999996  7999999999999999999999999999999999999999999643


Q ss_pred             --CcCCCCCccccccCCCc-hHHhHHhhhccccee
Q psy1099         329 --AVVPQAPFGGFKESGIG-RELGKAALDEYTELK  360 (605)
Q Consensus       329 --~~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k  360 (605)
                        ...+.+||||+|.||+| +.+|..++..|+..+
T Consensus      1076 ~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~ 1110 (1318)
T PRK11809       1076 VGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATR 1110 (1318)
T ss_pred             cCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccC
Confidence              33456899999999999 468888888876554

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=99.94  E-value=7.2e-27  Score=251.74  Aligned_cols=240  Identities=24%  Similarity=0.337  Sum_probs=193.5

Q ss_pred             ccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCCCh----------------------
Q psy1099           3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPMSA----------------------   56 (605)
Q Consensus         3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~----------------------   56 (605)
                      ++++++||++||+||+|||+.+|+++.++++++.    ++|+|+|++|+|+|++....                      
T Consensus       125 ~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~  204 (454)
T cd07129         125 GGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGR  204 (454)
T ss_pred             hhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHH
Confidence            4799999999999999999999999999988875    78999999999998642210                      


Q ss_pred             -------h--hh---------------------------------------hhhcCCcccccceeEeccc-cHHHHHHHH
Q psy1099          57 -------P--YW---------------------------------------RKSCLSPLAYRSRTYVQED-IYDTFVKKA   87 (605)
Q Consensus        57 -------~--~~---------------------------------------~~~~~~~~~~~~~~~v~~~-i~~~~~~~l   87 (605)
                             .  .+                                       .|.|.++    +|++||++ +||+|+++|
T Consensus       205 ~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~----~rv~v~~~~i~d~f~~~l  280 (454)
T cd07129         205 ALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNP----GLVLVPAGPAGDAFIAAL  280 (454)
T ss_pred             HHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCC----ceEEEeCcccHHHHHHHH
Confidence                   0  00                                       0234444    89999999 999999999


Q ss_pred             HHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccc
Q psy1099          88 VEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFG  167 (605)
Q Consensus        88 ~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifg  167 (605)
                      .++++++++|          |++++.+.++..+.|+.+.+.                                       
T Consensus       281 ~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~~~---------------------------------------  311 (454)
T cd07129         281 AEALAAAPAQ----------TMLTPGIAEAYRQGVEALAAA---------------------------------------  311 (454)
T ss_pred             HHHHhccCCC----------CCcChHHHHHHHHHHHHHHhc---------------------------------------
Confidence            9999888764          555555444444444444443                                       


Q ss_pred             ceeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCC
Q psy1099         168 PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD  247 (605)
Q Consensus       168 p~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~  247 (605)
                                                                                        .|+++++||... .
T Consensus       312 ------------------------------------------------------------------~ga~~l~gg~~~-~  324 (454)
T cd07129         312 ------------------------------------------------------------------PGVRVLAGGAAA-E  324 (454)
T ss_pred             ------------------------------------------------------------------CCcEEEeCCCcC-C
Confidence                                                                              055555555432 2


Q ss_pred             CCeeeeeeEeeccC---cchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCC--hHHHHHHHHHh--hcc
Q psy1099         248 KGYFIEPTVFSNVT---DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN--IDTANTFAHAI--NAG  320 (605)
Q Consensus       248 ~g~~~~Ptvl~~v~---~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d--~~~~~~~~~~~--~~g  320 (605)
                      +++|++|||+...+   +++++++||+||||++|++|+|.||||+++|+++|||++||||+|  .+.+++++++|  ++|
T Consensus       325 ~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G  404 (454)
T cd07129         325 GGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAG  404 (454)
T ss_pred             CCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCc
Confidence            57899999998555   689999999999999999999999999999999999999999999  79999999999  699


Q ss_pred             cEEEeccCCc-C--CCCCccc-cccCCCchH--HhHHhhhcccceeEE
Q psy1099         321 SVWINCYQAV-V--PQAPFGG-FKESGIGRE--LGKAALDEYTELKTV  362 (605)
Q Consensus       321 ~v~iN~~~~~-~--~~~pfGG-~~~SG~G~~--~G~~~~~~~~~~k~~  362 (605)
                      +|+||..... .  +.+|||| +|.||+|++  .|.+++++|++...+
T Consensus       405 ~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~~~  452 (454)
T cd07129         405 RLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPVCY  452 (454)
T ss_pred             EEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccccc
Confidence            9999965332 2  4889999 999999998  789999999887653

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=99.94  E-value=4.8e-27  Score=252.03  Aligned_cols=248  Identities=22%  Similarity=0.306  Sum_probs=204.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCC-CCccEEEecCCCCCChhhh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGF-PDGVISVLPGYGPMSAPYW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGl-P~gvv~vv~g~~~~~~~~~---------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++.++++++|+ |+|++|+|+|+++....++                     
T Consensus       117 ~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~  196 (442)
T cd07084         117 PLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLA  196 (442)
T ss_pred             HHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHH
Confidence            467899999999999999999999999999999999998 9999999998654211000                     


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccc-cHHHHHHHHHHHHhcCcc
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQED-IYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~-i~~~~~~~l~~~~~~~~v   96 (605)
                                                                .|.|.++    +|++||++ +|++|++++++.++++++
T Consensus       197 ~~a~~~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~----~rl~V~~~~i~~~f~~~l~~~~~~~~~  272 (442)
T cd07084         197 LDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQ----SMLFVPENWSKTPLVEKLKALLARRKL  272 (442)
T ss_pred             HhccCCcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCC----cEEEEeCCccHHHHHHHHHHHHHhccc
Confidence                                                      0345454    89999999 999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHc-CcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQ-GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~-G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      |     ++.+||+++.    ++.++|+.+.++ |+++.+||.....                                  
T Consensus       273 g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~~----------------------------------  309 (442)
T cd07084         273 E-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELKN----------------------------------  309 (442)
T ss_pred             C-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCccccc----------------------------------
Confidence            8     6788888655    345556666666 4677777643100                                  


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                        .......|+|++||
T Consensus       310 ------------------------------------------------------------------~~~~~~~g~~~~Pt  323 (442)
T cd07084         310 ------------------------------------------------------------------HSIPSIYGACVASA  323 (442)
T ss_pred             ------------------------------------------------------------------CCCCCcCCcccCCe
Confidence                                                                              00001247899999


Q ss_pred             EeeccCcch---hhhhhhhcCceEEeEecCC--HHHHHHhhcCCCcceeEEEecCChHHHHHHHHHh-hcccEEEecc--
Q psy1099         256 VFSNVTDDF---KIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAI-NAGSVWINCY--  327 (605)
Q Consensus       256 vl~~v~~~~---~i~~eE~FgPvl~i~~~~d--~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~-~~g~v~iN~~--  327 (605)
                      |+.+++++|   ++++||+||||++|++|+|  ++|||+++|+++|||++||||+|.++++++++++ ++|+||||..  
T Consensus       324 vl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~  403 (442)
T cd07084         324 LFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGR  403 (442)
T ss_pred             EEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCC
Confidence            999999997   9999999999999999999  9999999999999999999999999999999999 9999999954  


Q ss_pred             CCcCCCCCccc-cccCCCchHH-hHHhhhcccceeEE
Q psy1099         328 QAVVPQAPFGG-FKESGIGREL-GKAALDEYTELKTV  362 (605)
Q Consensus       328 ~~~~~~~pfGG-~~~SG~G~~~-G~~~~~~~~~~k~~  362 (605)
                      ....+..|||| .|.||+|++. |.++++.|++.+.+
T Consensus       404 ~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~  440 (442)
T cd07084         404 TGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE  440 (442)
T ss_pred             CCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence            34455677766 8899999886 89999888877653

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=99.93  E-value=3.9e-26  Score=243.13  Aligned_cols=282  Identities=20%  Similarity=0.192  Sum_probs=217.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCC-ChhhhhhhcCCcccccceeEec
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPM-SAPYWRKSCLSPLAYRSRTYVQ   76 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~-~~~~~~~~~~~~~~~~~~~~v~   76 (605)
                      ++|++++||++||+||+||||.||+++.+++++++    ++|+|+|++|+|+|++.. +..++.++-++.+.|+++.-+.
T Consensus       114 ~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g  193 (429)
T cd07121         114 IINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVV  193 (429)
T ss_pred             HHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHH
Confidence            57899999999999999999999999999999885    689999999999986533 3445555545555666543222


Q ss_pred             cccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCC
Q psy1099          77 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTD  156 (605)
Q Consensus        77 ~~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~  156 (605)
                               +.+.+..                                   +-..+++||++         |.||+++.+
T Consensus       194 ---------~~v~~~~-----------------------------------k~~~lelGGk~---------p~iV~~dAD  220 (429)
T cd07121         194 ---------KAALSSG-----------------------------------KKAIGAGAGNP---------PVVVDETAD  220 (429)
T ss_pred             ---------HHHHhCC-----------------------------------CceEeecCCCc---------eEEEecCCC
Confidence                     2221110                                   11257889987         888887654


Q ss_pred             chhhhccccccc----ee-------EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHH
Q psy1099         157 DFKIAREEIFGP----VQ-------TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVL  225 (605)
Q Consensus       157 ~~~~~~~~ifgp----~~-------~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~  225 (605)
                      ..+++...+++.    +|       .+++++.+|++++.+.+...                       -.++.++++++.
T Consensus       221 ld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~-----------------------~~i~~~~~~~v~  277 (429)
T cd07121         221 IEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRNGA-----------------------YVLNDEQAEQLL  277 (429)
T ss_pred             HHHHHHHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHCCC-----------------------EEcCHHHHHHHH
Confidence            445555556553    34       45677789999998876410                       146788899999


Q ss_pred             Hhhhhcccc--CCeeeeCCCcc---CCCCeeee---eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcc
Q psy1099         226 NYIKSGVEQ--GGKLEAGGKRK---GDKGYFIE---PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG  297 (605)
Q Consensus       226 ~~i~~a~~~--ga~~~~gg~~~---~~~g~~~~---Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~g  297 (605)
                      ++++++.+.  |++++.||...   ...|++++   |||+.+++++|++++||+|||||+|++|+|+||||+++|+++||
T Consensus       278 ~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~G  357 (429)
T cd07121         278 EVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHG  357 (429)
T ss_pred             HhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccC
Confidence            999999874  78999988531   12477777   59999999999999999999999999999999999999999999


Q ss_pred             e--eEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCccccccCCC--chHHhHHhhhcccceeEEEec
Q psy1099         298 L--ASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI--GRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       298 l--aa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~--G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |  ++||||+|.+++++|++++++|+||||.+..  +.+||||+|.|++  |..-| .++   +..|+|+..
T Consensus       358 Lghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~~~  423 (429)
T cd07121         358 NRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFTRR  423 (429)
T ss_pred             CCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcC-cCc---cChhhhhee
Confidence            8  9999999999999999999999999997644  6789999999998  65544 322   455555543

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>KOG2455|consensus

Probab=99.92  E-value=6.7e-25  Score=217.89  Aligned_cols=194  Identities=30%  Similarity=0.510  Sum_probs=162.6

Q ss_pred             hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcc
Q psy1099          60 RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP-FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKR  138 (605)
Q Consensus        60 ~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~~-~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~  138 (605)
                      .|.|.+.    +|+||++++|.++.++|++...++++|+| .|.++++||+|+...+.++.++|+.|...-         
T Consensus       342 GQkcsA~----SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~---------  408 (561)
T KOG2455|consen  342 GQKCSAC----SRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDP---------  408 (561)
T ss_pred             ccccchh----hhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCc---------
Confidence            3677776    99999999999999999999999999997 788999999999999988888887765421         


Q ss_pred             cCCCCccccceEeccCCCchhhhccccccceeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccch
Q psy1099         139 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDA  218 (605)
Q Consensus       139 ~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~  218 (605)
                                                                                                      
T Consensus       409 --------------------------------------------------------------------------------  408 (561)
T KOG2455|consen  409 --------------------------------------------------------------------------------  408 (561)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCC--HHHHHHhh-cCCC
Q psy1099         219 EMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERA-NDTK  295 (605)
Q Consensus       219 ~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~-n~~~  295 (605)
                                      ...+++||.-+...|+|+.|||+.--+|.+++|.||+|||||+|+.|+|  ++|+++++ |.++
T Consensus       409 ----------------~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~  472 (561)
T KOG2455|consen  409 ----------------ELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTP  472 (561)
T ss_pred             ----------------cceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCc
Confidence                            1235556655566789999999988999999999999999999999975  78999988 5679


Q ss_pred             cceeEEEecCChHHHHHHHHHhh--cccEEEe--ccCCcCCCCCccccccCCCch-HHhHHhhhcccceeEE
Q psy1099         296 YGLASGIVTTNIDTANTFAHAIN--AGSVWIN--CYQAVVPQAPFGGFKESGIGR-ELGKAALDEYTELKTV  362 (605)
Q Consensus       296 ~glaa~vft~d~~~~~~~~~~~~--~g~v~iN--~~~~~~~~~pfGG~~~SG~G~-~~G~~~~~~~~~~k~~  362 (605)
                      |||+.+||++|.+.+++..++++  +|+.|||  +++......||||.+.||... .+|...+..|+.+.++
T Consensus       473 YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~i  544 (561)
T KOG2455|consen  473 YALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSI  544 (561)
T ss_pred             ceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchh
Confidence            99999999999999999988777  9999999  466678899999999999874 4455555566655543

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=99.92  E-value=7.3e-26  Score=240.07  Aligned_cols=261  Identities=17%  Similarity=0.184  Sum_probs=198.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCC-CChhhh-hhhcCCcccccceeEe
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGP-MSAPYW-RKSCLSPLAYRSRTYV   75 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~-~~~~~~-~~~~~~~~~~~~~~~v   75 (605)
                      ++|++++||++||+||+||||.+|+++.+++++++    ++|+|+|++|+|+|++. .....+ .++-++.+.|+++.-+
T Consensus       124 ~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~  203 (406)
T cd07079         124 TVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGL  203 (406)
T ss_pred             HHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHH
Confidence            57899999999999999999999999999999997    78999999999998543 334433 2334455566664333


Q ss_pred             ccccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCC
Q psy1099          76 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVT  155 (605)
Q Consensus        76 ~~~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~  155 (605)
                      .+.         +.+.+ .                                 .-..+++||++         |.||+++.
T Consensus       204 G~~---------i~~~a-~---------------------------------~pv~lELGGk~---------p~IV~~dA  231 (406)
T cd07079         204 IRF---------VVENA-T---------------------------------IPVIKHGDGNC---------HVYVDESA  231 (406)
T ss_pred             HHH---------HHHhc-C---------------------------------CCEEeecCCcc---------eEEEeCCC
Confidence            222         22211 0                                 11268999997         88888655


Q ss_pred             Cchhhhccccccc----e------eEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHH
Q psy1099         156 DDFKIAREEIFGP----V------QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVL  225 (605)
Q Consensus       156 ~~~~~~~~~ifgp----~------~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~  225 (605)
                      +...++...+++.    +      ..+|+++.+|++++.+.+                                      
T Consensus       232 Dl~~Aa~~i~~~~f~n~G~C~a~~rv~V~~si~d~f~~~l~~--------------------------------------  273 (406)
T cd07079         232 DLEMAVRIVVNAKTQRPSVCNALETLLVHRDIAEEFLPKLAE--------------------------------------  273 (406)
T ss_pred             CHHHHHHHHHHcccCCCcccccceeEEEeHHHHHHHHHHHHH--------------------------------------
Confidence            4434445545442    2      234556667777765532                                      


Q ss_pred             HhhhhccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecC
Q psy1099         226 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT  305 (605)
Q Consensus       226 ~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~  305 (605)
                          ...+.|++++.|+..    ..|++||    ++++|++++||+|||||+|++|+|+||||+++|+++|||++||||+
T Consensus       274 ----~~~~~ga~~~~g~~~----~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~  341 (406)
T cd07079         274 ----ALREAGVELRGDEET----LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTE  341 (406)
T ss_pred             ----HHHHCCCEEecCHHH----HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeC
Confidence                111246775533221    1367888    8899999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHhhcccEEEeccCCcCCCCCccccccCCC----chHHhHHhhhcccceeEEEe
Q psy1099         306 NIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI----GRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       306 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~----G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |.++++++++++++|+|+||......+..||||.+.||+    |+++|.+++++|++.|+++.
T Consensus       342 d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~  404 (406)
T cd07079         342 NYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR  404 (406)
T ss_pred             CHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence            999999999999999999997665556789999999998    89999999999999998764

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=99.91  E-value=1.8e-24  Score=232.18  Aligned_cols=284  Identities=19%  Similarity=0.176  Sum_probs=214.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCC-ChhhhhhhcCCcccccceeEec
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPM-SAPYWRKSCLSPLAYRSRTYVQ   76 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~-~~~~~~~~~~~~~~~~~~~~v~   76 (605)
                      +++++++||++||+||+|||+.+|+++.+++++++    ++|+|+|++|+|+|.+.. +..++.++.++.+.|+++.-+.
T Consensus       146 ~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G  225 (465)
T PRK15398        146 IINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVV  225 (465)
T ss_pred             HHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHH
Confidence            57899999999999999999999999999999987    589999999999985433 3344555555666666643322


Q ss_pred             cccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCC
Q psy1099          77 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTD  156 (605)
Q Consensus        77 ~~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~  156 (605)
                               +.+.+ ...                                  -..+++||++         |+||+++.+
T Consensus       226 ---------~~v~~-~~k----------------------------------~~~~elGGk~---------p~IV~~dAD  252 (465)
T PRK15398        226 ---------KAAMK-SGK----------------------------------KAIGAGAGNP---------PVVVDETAD  252 (465)
T ss_pred             ---------HHHHH-cCC----------------------------------ceeeecCCCc---------eEEEecCCC
Confidence                     22221 000                                  1146778886         889987655


Q ss_pred             chhhhccccccc----ee-------EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHH
Q psy1099         157 DFKIAREEIFGP----VQ-------TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVL  225 (605)
Q Consensus       157 ~~~~~~~~ifgp----~~-------~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~  225 (605)
                      ..++++..+++.    +|       .+++++.+|++++++.+...                       ..++..+++++.
T Consensus       253 ld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~~-----------------------~li~~~~~~~v~  309 (465)
T PRK15398        253 IEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNGA-----------------------VLLTAEQAEKLQ  309 (465)
T ss_pred             HHHHHHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcCC-----------------------ccCCHHHHHHHH
Confidence            445556666653    34       45677889999998876410                       257788999999


Q ss_pred             HhhhhccccCCeeeeCCCcc---CCCCeee---eeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcce-
Q psy1099         226 NYIKSGVEQGGKLEAGGKRK---GDKGYFI---EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL-  298 (605)
Q Consensus       226 ~~i~~a~~~ga~~~~gg~~~---~~~g~~~---~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~gl-  298 (605)
                      ++++++.+++++++.|+...   ...|+++   +|||+.+++++|++++||+|||||+|++|+|+||||+++|+++||| 
T Consensus       310 ~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~  389 (465)
T PRK15398        310 KVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNR  389 (465)
T ss_pred             HHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCc
Confidence            99997655666777776431   1235555   4899999999999999999999999999999999999999999988 


Q ss_pred             -eEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         299 -ASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       299 -aa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                       ++||||+|.+++++|++++++|+|+||.+..  +.+||||+|.|.+-- +|+.+ ...+..|+|+..
T Consensus       390 hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~~-~~~~g-~~~~~~~~~~~~  453 (465)
T PRK15398        390 HTAIMHSRNVDNLNKMARAIQTSIFVKNGPSY--AGLGLGGEGFTTFTI-ATPTG-EGVTSARTFTRR  453 (465)
T ss_pred             ceEEEecCCHHHHHHHHHhCCceEEEECCCCc--cccCcCCCCCceeee-cccCC-CCccchhhhhhh
Confidence             9999999999999999999999999996543  678999999998521 13444 444555555544

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=99.91  E-value=2.1e-24  Score=242.18  Aligned_cols=258  Identities=15%  Similarity=0.158  Sum_probs=197.5

Q ss_pred             cchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCcc----EEEecCCCCCChhhhhhhcCCcccccceeEecccc
Q psy1099           4 WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGV----ISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDI   79 (605)
Q Consensus         4 ~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gv----v~vv~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~i   79 (605)
                      |+++|||++||+||+||||.||+++.++++++.++ +|+|+    +|+|+|..+.+..+..++-++.+.|+++.      
T Consensus       422 ~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt------  494 (718)
T PLN02418        422 QIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSN------  494 (718)
T ss_pred             HHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCH------
Confidence            89999999999999999999999999999999999 99996    99999733223333444555556666654      


Q ss_pred             HHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchh
Q psy1099          80 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  159 (605)
Q Consensus        80 ~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~  159 (605)
                        ..+.++.+.  .+                                 +-..+++||++         |.||.++. |++
T Consensus       495 --~~i~~~aa~--~~---------------------------------k~v~lELGGk~---------p~iV~~DA-Dld  527 (718)
T PLN02418        495 --KLVSQIKAS--TK---------------------------------IPVLGHADGIC---------HVYVDKSA-DMD  527 (718)
T ss_pred             --HHHHHHHHh--cC---------------------------------CCEEEeCCCcc---------eEEEeCCC-CHH
Confidence              111111110  00                                 11268999997         78887654 454


Q ss_pred             hhccc-ccc---ceeEEEe-------cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhh
Q psy1099         160 IAREE-IFG---PVQTIIK-------FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYI  228 (605)
Q Consensus       160 ~~~~~-ifg---p~~~~v~-------~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i  228 (605)
                      .+.+. +++   ..|.|..       ++.+|+                                         +++..+|
T Consensus       528 ~A~~~i~~~~~~nGQ~C~a~~RllVh~~i~d~-----------------------------------------G~~~~~i  566 (718)
T PLN02418        528 MAKRIVVDAKTDYPAACNAMETLLVHKDLVQN-----------------------------------------GGLNDLL  566 (718)
T ss_pred             HHHHHHHHHhCCCCCccccCcEEEEecccccc-----------------------------------------ccHHHHH
Confidence            44443 322   3454442       222221                                         1367889


Q ss_pred             hhccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChH
Q psy1099         229 KSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNID  308 (605)
Q Consensus       229 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~  308 (605)
                      ++|+++|+++ +||.+..  |      ++. + ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus       567 ~~a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~  635 (718)
T PLN02418        567 VALRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSE  635 (718)
T ss_pred             HHHHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHH
Confidence            9999999999 6775421  3      233 3 78999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccEEEeccCCcCCCCCccccccCCC--chHH--hHHhhhcccceeEEEecCC
Q psy1099         309 TANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI--GREL--GKAALDEYTELKTVTESPL  367 (605)
Q Consensus       309 ~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~--G~~~--G~~~~~~~~~~k~~t~s~~  367 (605)
                      ++.+|++++++|.||||......+..||||+|+||+  |+++  |.+++++|+..|+++...|
T Consensus       636 ~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g  698 (718)
T PLN02418        636 VAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNG  698 (718)
T ss_pred             HHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCC
Confidence            999999999999999998665566789999999999  8775  9999999999999876643

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=99.91  E-value=3.2e-24  Score=228.33  Aligned_cols=262  Identities=17%  Similarity=0.200  Sum_probs=195.3

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHH----HHcCCCCccEEEecCCC-CCChhhhh-hhcCCcccccceeEe
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALT----QQAGFPDGVISVLPGYG-PMSAPYWR-KSCLSPLAYRSRTYV   75 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll----~~aGlP~gvv~vv~g~~-~~~~~~~~-~~~~~~~~~~~~~~v   75 (605)
                      ++|++++||++||+||+||||.||+++.++++++    .++|+|+|++|+|+|++ +.....+. ++..+.+.|++    
T Consensus       130 ~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTG----  205 (417)
T PRK00197        130 TVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRG----  205 (417)
T ss_pred             HHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecC----
Confidence            5789999999999999999999999999998885    68899999999999643 33333332 33333333433    


Q ss_pred             ccccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCC
Q psy1099          76 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVT  155 (605)
Q Consensus        76 ~~~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~  155 (605)
                           +.-+.+.+.+.+                                  ..-..+++||++         |.||+++.
T Consensus       206 -----S~~~g~~i~~~a----------------------------------~~~~~lELGGk~---------p~IV~~dA  237 (417)
T PRK00197        206 -----GAGLIRRVVENA----------------------------------TVPVIEHGDGIC---------HIYVDESA  237 (417)
T ss_pred             -----CHHHHHHHHHhc----------------------------------CCCEEeecCCcc---------eEEEeCCC
Confidence                 122222222211                                  122368999997         88888665


Q ss_pred             Cchhhhccccccc----e------eEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHH
Q psy1099         156 DDFKIAREEIFGP----V------QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVL  225 (605)
Q Consensus       156 ~~~~~~~~~ifgp----~------~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~  225 (605)
                      +..++++..+++.    +      ..+++++.+|++++.+.+.                                     
T Consensus       238 dl~~Aa~~iv~~~~~n~G~C~a~~rv~V~~~i~d~f~~~l~~~-------------------------------------  280 (417)
T PRK00197        238 DLDKALKIVLNAKTQRPSVCNALETLLVHEAIAEEFLPKLAEA-------------------------------------  280 (417)
T ss_pred             CHHHHHHHHHHhccCCCcccccceEEEEEHHHhHHHHHHHHHH-------------------------------------
Confidence            5444555555543    2      3345666778877765431                                     


Q ss_pred             HhhhhccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecC
Q psy1099         226 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT  305 (605)
Q Consensus       226 ~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~  305 (605)
                           ..+.++++. |+...  .+ + -|||+   +++|++++||+|||||+|++|+|+||||+++|+++|||++||||+
T Consensus       281 -----~~~~~~~~~-~~~~~--~~-~-~PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~  347 (417)
T PRK00197        281 -----LAEAGVELR-GDEAA--LA-L-LPDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTE  347 (417)
T ss_pred             -----HHHCCCeEe-cCHHH--HH-h-hcccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeC
Confidence                 111133333 22211  12 2 39998   468999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHhhcccEEEeccCCcCCCCCccccccCCCc----hHHhHHhhhcccceeEEEec
Q psy1099         306 NIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIG----RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       306 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~G----~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |.++++++++++++|+|+||......+..||||.+.||+|    +++|.+++++|+..|+++..
T Consensus       348 d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~  411 (417)
T PRK00197        348 DYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG  411 (417)
T ss_pred             CHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence            9999999999999999999986665667899999999999    89999999999999988754

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=99.90  E-value=1.7e-23  Score=227.37  Aligned_cols=245  Identities=19%  Similarity=0.286  Sum_probs=196.3

Q ss_pred             ccchhHHHhhcCcEEEccCCCCchhHH----HHHHHHHHcCCCCccEEEecCCC-CCChh-hh-----------------
Q psy1099           3 AWKWGPALAAGCPVLLKPAEQTPLTAL----YVAALTQQAGFPDGVISVLPGYG-PMSAP-YW-----------------   59 (605)
Q Consensus         3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~----~l~~ll~~aGlP~gvv~vv~g~~-~~~~~-~~-----------------   59 (605)
                      ++++++||++||+|||||||.+|++++    ++.++|.++|+|+|++|+|+|++ +.... ++                 
T Consensus       211 ~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G  290 (549)
T cd07127         211 YPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFG  290 (549)
T ss_pred             HHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHH
Confidence            678899999999999999999999875    45689999999999999999753 22111 00                 


Q ss_pred             ---------------------------------------------hhhcCCcccccceeEeccc---------cHHHHHH
Q psy1099          60 ---------------------------------------------RKSCLSPLAYRSRTYVQED---------IYDTFVK   85 (605)
Q Consensus        60 ---------------------------------------------~~~~~~~~~~~~~~~v~~~---------i~~~~~~   85 (605)
                                                                   .|.|.++    +|+|||++         +||+|++
T Consensus       291 ~~i~~~a~~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~----~ri~V~~s~i~~~~g~~i~d~f~~  366 (549)
T cd07127         291 DWLEANARQAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTP----QNIYVPRDGIQTDDGRKSFDEVAA  366 (549)
T ss_pred             HHHHHHhccCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCC----CEEEEECCccccccchhHHHHHHH
Confidence                                                         1456666    99999999         8999999


Q ss_pred             HHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccc
Q psy1099          86 KAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI  165 (605)
Q Consensus        86 ~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~i  165 (605)
                      +|++.++++ +|+|.+..+++||+++..+++++.    ++++.|+ +++||....                         
T Consensus       367 ~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~----~a~~~g~-vl~gg~~~~-------------------------  415 (549)
T cd07127         367 DLAAAIDGL-LADPARAAALLGAIQSPDTLARIA----EARQLGE-VLLASEAVA-------------------------  415 (549)
T ss_pred             HHHHHHHHh-cCCccccccccCCcCCHHHHHHHH----HHHhCCC-EEEcCCcCC-------------------------
Confidence            999999999 999999999999999999988874    3445554 555554210                         


Q ss_pred             ccceeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCcc
Q psy1099         166 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK  245 (605)
Q Consensus       166 fgp~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~  245 (605)
                                                                                                    ..
T Consensus       416 ------------------------------------------------------------------------------~~  417 (549)
T cd07127         416 ------------------------------------------------------------------------------HP  417 (549)
T ss_pred             ------------------------------------------------------------------------------Cc
Confidence                                                                                          00


Q ss_pred             C-CCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCC--c-ceeEEEecCChHHHHHHHHH-hhcc
Q psy1099         246 G-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK--Y-GLASGIVTTNIDTANTFAHA-INAG  320 (605)
Q Consensus       246 ~-~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~--~-glaa~vft~d~~~~~~~~~~-~~~g  320 (605)
                      . ..+++++|||+...+++|++++||+||||++|++|+|.||||+++|++.  + ||++||||+|.+.++++.++ .++|
T Consensus       418 ~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~  497 (549)
T cd07127         418 EFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAG  497 (549)
T ss_pred             CCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhc
Confidence            1 1235679999998889999999999999999999999999999999984  5 69999999999999999998 5555


Q ss_pred             -cEEEeccCCcCC--CCCccccccCCCchHHhHHhhh-ccccee
Q psy1099         321 -SVWINCYQAVVP--QAPFGGFKESGIGRELGKAALD-EYTELK  360 (605)
Q Consensus       321 -~v~iN~~~~~~~--~~pfGG~~~SG~G~~~G~~~~~-~~~~~k  360 (605)
                       +++||.++....  .+||||++.||.....|....+ .|...+
T Consensus       498 ~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r  541 (549)
T cd07127         498 VALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANR  541 (549)
T ss_pred             CcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcc
Confidence             999997665533  3569999999988766655444 354433

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>KOG2453|consensus

Probab=99.89  E-value=1.5e-23  Score=201.34  Aligned_cols=252  Identities=30%  Similarity=0.487  Sum_probs=209.9

Q ss_pred             ccchhHHHhhcCcEEEccCCCCchhHHH----HHHHHHHcCCCCccEEEecCCCCCChhh--------------------
Q psy1099           3 AWKWGPALAAGCPVLLKPAEQTPLTALY----VAALTQQAGFPDGVISVLPGYGPMSAPY--------------------   58 (605)
Q Consensus         3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~----l~~ll~~aGlP~gvv~vv~g~~~~~~~~--------------------   58 (605)
                      -|.-+.|+.+||+|+|||++++|+++..    +.+.|.+-.+|.+.....+|.++.....                    
T Consensus       171 gwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKs  250 (507)
T KOG2453|consen  171 GWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKS  250 (507)
T ss_pred             ccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhH
Confidence            3667889999999999999999998754    5555666689999999999876542110                    


Q ss_pred             -------------h-------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099          59 -------------W-------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR   94 (605)
Q Consensus        59 -------------~-------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~   94 (605)
                                   +                               .|+|..    +.|+++|+++||+++++|....++.
T Consensus       251 vgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt----~rrl~~hesvyd~vlerlkkayaq~  326 (507)
T KOG2453|consen  251 VGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTT----TRRLIVHESVYDQVLERLKKAYAQF  326 (507)
T ss_pred             HHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhh----hhHHHhhHHHHHHHHHHHHHHHHhe
Confidence                         0                               022322    2799999999999999999999999


Q ss_pred             ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      ++|.|+|+.+.+||+-++.+.......++.+.++|++++.||+..                                   
T Consensus       327 ~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~-----------------------------------  371 (507)
T KOG2453|consen  327 EIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVL-----------------------------------  371 (507)
T ss_pred             ecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEee-----------------------------------
Confidence            999999999999999999999998888888888888888888742                                   


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                             +.+|.|+.|
T Consensus       372 -----------------------------------------------------------------------er~gnfvep  380 (507)
T KOG2453|consen  372 -----------------------------------------------------------------------ERDGNFVEP  380 (507)
T ss_pred             -----------------------------------------------------------------------ccCCCcccc
Confidence                                                                                   236788888


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHH--HhhcccEEEeccCC-cC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAH--AINAGSVWINCYQA-VV  331 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~--~~~~g~v~iN~~~~-~~  331 (605)
                      |+++ +.+|.+++.+|.|.|||.|.+|++++||+++-|..+.||+++|||+|..++-++.-  .-++|.|.||.++. ..
T Consensus       381 tivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgae  459 (507)
T KOG2453|consen  381 TIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAE  459 (507)
T ss_pred             eEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchh
Confidence            8887 88999999999999999999999999999999999999999999999999988765  45688888886543 24


Q ss_pred             CCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         332 PQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       332 ~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      -+-.|||-|..|-|++.|.....+|.+..+-|..
T Consensus       460 iggafggek~tgggresgsdswkqymrrstctin  493 (507)
T KOG2453|consen  460 IGGAFGGEKETGGGRESGSDSWKQYMRRSTCTIN  493 (507)
T ss_pred             hcccccCccccCCCcccCchHHHHHHhhceeeee
Confidence            5668999999999999999888887666554443

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=99.89  E-value=1.1e-22  Score=220.45  Aligned_cols=240  Identities=19%  Similarity=0.242  Sum_probs=186.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHH----HHHHHHHHcCCCCccEEEecCC-CCCChhhh-----------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTAL----YVAALTQQAGFPDGVISVLPGY-GPMSAPYW-----------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~----~l~~ll~~aGlP~gvv~vv~g~-~~~~~~~~-----------------   59 (605)
                      ++|++++||++||+|||||||.+|+++.    ++.++|.++|+|+|++|+|+|+ +......+                 
T Consensus       210 ~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~  289 (551)
T TIGR02288       210 TYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF  289 (551)
T ss_pred             HHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHH
Confidence            4789999999999999999999999765    5679999999999999999984 33211100                 


Q ss_pred             ----------------------------------------------hhhcCCcccccceeEeccc---------cHHHHH
Q psy1099          60 ----------------------------------------------RKSCLSPLAYRSRTYVQED---------IYDTFV   84 (605)
Q Consensus        60 ----------------------------------------------~~~~~~~~~~~~~~~v~~~---------i~~~~~   84 (605)
                                                                    .|.|.++    +|+|||++         +||+|+
T Consensus       290 G~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~----~ri~V~~~~i~~~~g~~i~def~  365 (551)
T TIGR02288       290 GQWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTT----QAILVPRDGIRTDQGRKSYDEVA  365 (551)
T ss_pred             HHHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCC----CEEEEeccccccccchhHHHHHH
Confidence                                                          1456665    99999999         799999


Q ss_pred             HHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccc
Q psy1099          85 KKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE  164 (605)
Q Consensus        85 ~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~  164 (605)
                      ++|++++.++ +|+|.+..+.+||+++..+++++    +++.+.| ++.+||....                        
T Consensus       366 ~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~------------------------  415 (551)
T TIGR02288       366 ADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIE------------------------  415 (551)
T ss_pred             HHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCC------------------------
Confidence            9999999999 99999999999999999998884    5566666 4444543200                        


Q ss_pred             cccceeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCc
Q psy1099         165 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKR  244 (605)
Q Consensus       165 ifgp~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~  244 (605)
                                                                                                     .
T Consensus       416 -------------------------------------------------------------------------------~  416 (551)
T TIGR02288       416 -------------------------------------------------------------------------------H  416 (551)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           0


Q ss_pred             cC-CCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCC--Ccc-eeEEEecCChHHHHHHHHHh--h
Q psy1099         245 KG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT--KYG-LASGIVTTNIDTANTFAHAI--N  318 (605)
Q Consensus       245 ~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~--~~g-laa~vft~d~~~~~~~~~~~--~  318 (605)
                      .. ...+|++|||+....++|++++||+||||++|++|+|+||||+++|++  +|| |++||||+|.++++++.+++  .
T Consensus       417 ~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~  496 (551)
T TIGR02288       417 PEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDA  496 (551)
T ss_pred             CCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHh
Confidence            01 123688999995444599999999999999999999999999999998  566 99999999999999999998  3


Q ss_pred             cccEEEeccCCc--CCCCCccccccCCCchHHhHHhhh
Q psy1099         319 AGSVWINCYQAV--VPQAPFGGFKESGIGRELGKAALD  354 (605)
Q Consensus       319 ~g~v~iN~~~~~--~~~~pfGG~~~SG~G~~~G~~~~~  354 (605)
                      +|+++||..+..  +...+|++.+.||.....+....+
T Consensus       497 ~~~l~iN~~G~v~vN~~~~~~~~~~sg~n~~a~~~~~~  534 (551)
T TIGR02288       497 AVALSLNLTGGVFVNQSAAFSDFHGTGGNPAANASLSD  534 (551)
T ss_pred             ccCeeecCCceEEEccCCCCCCCCCCCCCCccCCcccc
Confidence            444444422211  234578888888876555544333

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=99.89  E-value=6.8e-23  Score=230.52  Aligned_cols=259  Identities=15%  Similarity=0.148  Sum_probs=194.7

Q ss_pred             ccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCc----cEEEecCCCCCChhhhh-hhcCCcccccceeEecc
Q psy1099           3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDG----VISVLPGYGPMSAPYWR-KSCLSPLAYRSRTYVQE   77 (605)
Q Consensus         3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~g----vv~vv~g~~~~~~~~~~-~~~~~~~~~~~~~~v~~   77 (605)
                      +|++++||+|||+||+||||.||+|+.+++++++++ +|+|    ++|+|+| ++.....+. +.-++.+.|++      
T Consensus       413 ~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTG------  484 (715)
T TIGR01092       413 VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRG------  484 (715)
T ss_pred             HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcC------
Confidence            478999999999999999999999999999999999 9987    6899985 333333322 22233334443      


Q ss_pred             ccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCc
Q psy1099          78 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDD  157 (605)
Q Consensus        78 ~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~  157 (605)
                         +.-+++.+.+.+.                                  .-..+++||++         |+||+++ .|
T Consensus       485 ---S~~vG~~i~~~A~----------------------------------~pv~lElgGk~---------p~iV~~d-AD  517 (715)
T TIGR01092       485 ---SNKLVSQIKKSTK----------------------------------IPVLGHADGIC---------HVYVDKS-AS  517 (715)
T ss_pred             ---CHHHHHHHHHhCC----------------------------------CCEEEEcCCcc---------eEEECCC-CC
Confidence               2334444433222                                  22268999997         8898864 45


Q ss_pred             hhhhcccc----ccceeEEEecCC-------HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHH
Q psy1099         158 FKIAREEI----FGPVQTIIKFKT-------LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLN  226 (605)
Q Consensus       158 ~~~~~~~i----fgp~~~~v~~~~-------~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~  226 (605)
                      ++.+.+.+    |..+|.|+..+.       .|+                                         ..+.+
T Consensus       518 l~~A~~~i~~~~~~~GQ~C~a~~rvlV~~~i~d~-----------------------------------------~~~~~  556 (715)
T TIGR01092       518 VDMAKRIVRDAKCDYPAACNAMETLLVHKDLLRN-----------------------------------------GLLDD  556 (715)
T ss_pred             HHHHHHHHHHHhCCCCCccccCcEEEEehhhccc-----------------------------------------hhHHH
Confidence            65555555    334566654331       211                                         02456


Q ss_pred             hhhhccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCC
Q psy1099         227 YIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN  306 (605)
Q Consensus       227 ~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d  306 (605)
                      +++++.++|++++ ||.+..  . |+.     ..++++++++||+|||||+|++|+|+||||+++|+++|||++||||+|
T Consensus       557 ~v~~~~~~Ga~l~-Gg~~~~--~-~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d  627 (715)
T TIGR01092       557 LIDMLRTEGVTIH-GGPRFA--A-YLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTED  627 (715)
T ss_pred             HHHHHHHCCCEEE-CCcchh--h-eec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCC
Confidence            6677777899985 775421  2 332     136789999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhhcccEEEeccCCcCCCCCccccccCCCch----HHhHHhhhcccceeEEEecC
Q psy1099         307 IDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGR----ELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       307 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~G~----~~G~~~~~~~~~~k~~t~s~  366 (605)
                      .+++++|++++++|.|+||.+....+..||||+|+||+|+    +.|.+++++|+..|++....
T Consensus       628 ~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~  691 (715)
T TIGR01092       628 ENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK  691 (715)
T ss_pred             HHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence            9999999999999999999765556678999999999995    47899999999999887654

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=99.88  E-value=2.8e-22  Score=231.60  Aligned_cols=285  Identities=16%  Similarity=0.193  Sum_probs=217.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCCChhhhhhhcCCcccccceeEecc
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQE   77 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~~~~~~~~~~~~~~~~~~v~~   77 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++    ++|+|+|++|+|+|.+...                      
T Consensus       125 ~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~----------------------  182 (862)
T PRK13805        125 AIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPSVEL----------------------  182 (862)
T ss_pred             HHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCCHHH----------------------
Confidence            56899999999999999999999999999999876    5799999999999853221                      


Q ss_pred             ccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCc--EEEeCCcccCCCCccccceEeccCC
Q psy1099          78 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG--KLEAGGKRKGDKGYFIEPTVFSNVT  155 (605)
Q Consensus        78 ~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~--~~~~gG~~~~~~~~~v~P~vv~~~~  155 (605)
                            .+.|+...   .    .+.-.+.|.          ...++.+.+.+.  ..++||++         |+||+++.
T Consensus       183 ------~~~L~~~~---~----vd~I~fTGs----------~~v~~~a~~~~~pv~~e~gGk~---------p~iV~~dA  230 (862)
T PRK13805        183 ------TNALMNHP---G----IALILATGG----------PGMVKAAYSSGKPALGVGAGNV---------PAYIDKTA  230 (862)
T ss_pred             ------HHHHHcCC---C----ccEEEecCC----------HHHHHHHHhcCCCeEEECCCCC---------eEEEeCCC
Confidence                  12222110   0    122233331          112333433333  34556776         89998765


Q ss_pred             Cchhhhccccccc----ee-------EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHH
Q psy1099         156 DDFKIAREEIFGP----VQ-------TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKV  224 (605)
Q Consensus       156 ~~~~~~~~~ifgp----~~-------~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~  224 (605)
                      +..++++..+++.    +|       .+++.+..|++++.+.+..                       ...++..+++|+
T Consensus       231 Dl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g-----------------------~~l~~~~~~~~v  287 (862)
T PRK13805        231 DIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG-----------------------AYFLNKKELKKL  287 (862)
T ss_pred             CHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC-----------------------CeeCCHHHHHHH
Confidence            5445566666553    34       4566778999999886641                       125778999999


Q ss_pred             HHhhhhccccCCee-eeCCCcc---CCCCeeeeeeE------eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcC-
Q psy1099         225 LNYIKSGVEQGGKL-EAGGKRK---GDKGYFIEPTV------FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND-  293 (605)
Q Consensus       225 ~~~i~~a~~~ga~~-~~gg~~~---~~~g~~~~Ptv------l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~-  293 (605)
                      .++++++.+.+++. +.|+...   ...|++++||+      +.++++++++++ |+|||||+|++|+|+||||+++|+ 
T Consensus       288 ~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~  366 (862)
T PRK13805        288 EKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKL  366 (862)
T ss_pred             HHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHH
Confidence            99999987666543 4465321   12478889987      778999999887 789999999999999999999988 


Q ss_pred             ---CCcceeEEEecCChHHHHHHHHHhhcccEEEeccC----------CcCCCCCccccccCCCchHHhHHhhhccccee
Q psy1099         294 ---TKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ----------AVVPQAPFGGFKESGIGRELGKAALDEYTELK  360 (605)
Q Consensus       294 ---~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~----------~~~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k  360 (605)
                         ++|||+++|||+|.+++++|++++++|+|+||..+          ...+.+|||| |.||.|+++|+.+++.|++.|
T Consensus       367 ~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k  445 (862)
T PRK13805        367 VEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIK  445 (862)
T ss_pred             HhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheee
Confidence               48999999999999999999999999999999654          4578899997 999999999999999999999


Q ss_pred             EEEec
Q psy1099         361 TVTES  365 (605)
Q Consensus       361 ~~t~s  365 (605)
                      .+...
T Consensus       446 ~v~~~  450 (862)
T PRK13805        446 TVAKR  450 (862)
T ss_pred             eeeec
Confidence            87755

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=99.88  E-value=1.7e-22  Score=218.34  Aligned_cols=201  Identities=17%  Similarity=0.171  Sum_probs=164.3

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHH----HHHcCCCCccEEEecCCCCCCh-hhh-----------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAAL----TQQAGFPDGVISVLPGYGPMSA-PYW-----------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~l----l~~aGlP~gvv~vv~g~~~~~~-~~~-----------------   59 (605)
                      +.|++++||++||+||+|||+.+|+|+..++++    +.++|+|+|++|+|+|.+.+.. .++                 
T Consensus       121 ~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~  200 (488)
T TIGR02518       121 AIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV  200 (488)
T ss_pred             HHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH
Confidence            568899999999999999999999999985554    5788999999999998543211 110                 


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHH------
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEK------   90 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~------   90 (605)
                                                                 .|.|.+.    +|++||++||++|+++|.++      
T Consensus       201 ~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~----~rllV~~~i~d~f~~~L~~~g~~~~~  276 (488)
T TIGR02518       201 KAAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASE----QSIIVEECNKDAVVEELKKQGGYFLT  276 (488)
T ss_pred             HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCC----CEEEEeHHHHHHHHHHHHHhhhhhcC
Confidence                                                       0245554    89999999999999999998      


Q ss_pred             -HhcCccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099          91 -AAARKVGDP-FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP  168 (605)
Q Consensus        91 -~~~~~vg~~-~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp  168 (605)
                       ...+++|+| +++++.+||+++..+++++.+++..                                            
T Consensus       277 ~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~--------------------------------------------  312 (488)
T TIGR02518       277 AEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGL--------------------------------------------  312 (488)
T ss_pred             HHHHHhhcccccCCCCCcCcccccchHHHHHHHhcc--------------------------------------------
Confidence             889999996 6788999998877776666555444                                            


Q ss_pred             eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099         169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK  248 (605)
Q Consensus       169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~  248 (605)
                                                                                    ++++|+|+++||..    
T Consensus       313 --------------------------------------------------------------av~~gakll~gg~~----  326 (488)
T TIGR02518       313 --------------------------------------------------------------TVPEDAKVLIGEQN----  326 (488)
T ss_pred             --------------------------------------------------------------ccCCCCEEEEeCCC----
Confidence                                                                          44555565555532    


Q ss_pred             CeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcC----CCcceeEEEecCChHHHHHHHHHhhcccEEE
Q psy1099         249 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND----TKYGLASGIVTTNIDTANTFAHAINAGSVWI  324 (605)
Q Consensus       249 g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~----~~~glaa~vft~d~~~~~~~~~~~~~g~v~i  324 (605)
                                .+.+++++ ++|+||||++|++|+|+||||+++|+    ++|||+++|||+|.+++++|++++++|+|+|
T Consensus       327 ----------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~V  395 (488)
T TIGR02518       327 ----------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLV  395 (488)
T ss_pred             ----------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEE
Confidence                      24566776 79999999999999999999999887    6899999999999999999999999999999


Q ss_pred             ecc
Q psy1099         325 NCY  327 (605)
Q Consensus       325 N~~  327 (605)
                      |.+
T Consensus       396 N~~  398 (488)
T TIGR02518       396 NTG  398 (488)
T ss_pred             cCC
Confidence            953

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=99.88  E-value=9.1e-23  Score=217.27  Aligned_cols=275  Identities=17%  Similarity=0.167  Sum_probs=203.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCC-ChhhhhhhcCCcccccceeEec
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPM-SAPYWRKSCLSPLAYRSRTYVQ   76 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~-~~~~~~~~~~~~~~~~~~~~v~   76 (605)
                      ++|+++|||++||+||+||||++|+++.++++++.    ++|+|+|++|+|+|.+.+ +..++.++-++.+.|+++.-  
T Consensus       112 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~--  189 (439)
T cd07081         112 VIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA--  189 (439)
T ss_pred             HHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH--
Confidence            57899999999999999999999999999888885    679999999999986543 33444555555555655321  


Q ss_pred             cccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCC
Q psy1099          77 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTD  156 (605)
Q Consensus        77 ~~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~  156 (605)
                                +.+.+++ ..                               +-..+++||++         |.||.++.+
T Consensus       190 ----------v~~~aa~-~~-------------------------------k~~~lElGGk~---------p~IV~~dAD  218 (439)
T cd07081         190 ----------VVKAAYS-SG-------------------------------KPAIGVGAGNT---------PVVIDETAD  218 (439)
T ss_pred             ----------HHHHHHh-cC-------------------------------CCEEEEcCCCC---------eEEEcCCCC
Confidence                      1111100 00                               11257889987         888887654


Q ss_pred             chhhhcccccc----ceeE-------EEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHH
Q psy1099         157 DFKIAREEIFG----PVQT-------IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVL  225 (605)
Q Consensus       157 ~~~~~~~~ifg----p~~~-------~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~  225 (605)
                      ..++++..+++    .+|.       +++.+.+|++++++.+..                       ..+++.++.+++.
T Consensus       219 l~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~-----------------------gpli~~~~~~~v~  275 (439)
T cd07081         219 IKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG-----------------------AYKLTAEELQQVQ  275 (439)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC-----------------------CccCCHHHHHHHH
Confidence            44445555544    4454       455667899998886642                       2256788999999


Q ss_pred             HhhhhccccCCeeeeCCCc--cCCCCeeeeee---EeeccC--cchhhhhhhhcCceEEeEecCCHHHHHHhhcCC----
Q psy1099         226 NYIKSGVEQGGKLEAGGKR--KGDKGYFIEPT---VFSNVT--DDFKIAREEIFGPVQTIIKFKTLDEVIERANDT----  294 (605)
Q Consensus       226 ~~i~~a~~~ga~~~~gg~~--~~~~g~~~~Pt---vl~~v~--~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~----  294 (605)
                      .+|+++.++|++++.|+..  ....|++++||   ++.+++  ++|++++||+||||++|++|+|+||||+++|++    
T Consensus       276 ~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~  355 (439)
T cd07081         276 PVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEG  355 (439)
T ss_pred             HHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhcc
Confidence            9999999999987544321  11258899998   999888  999999999999999999999999999999965    


Q ss_pred             CcceeEEEecCC---hHHHHHHHHHhhcccEEEeccC---CcCCCCCccccccC--CCchHHhHHh
Q psy1099         295 KYGLASGIVTTN---IDTANTFAHAINAGSVWINCYQ---AVVPQAPFGGFKES--GIGRELGKAA  352 (605)
Q Consensus       295 ~~glaa~vft~d---~~~~~~~~~~~~~g~v~iN~~~---~~~~~~pfGG~~~S--G~G~~~G~~~  352 (605)
                      +|||+++|||+|   .++++++++++++|+|+||.+.   ...-..-|||++.+  |.|.++|...
T Consensus       356 ~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  421 (439)
T cd07081         356 GCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSV  421 (439)
T ss_pred             CCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCc
Confidence            799999999999   9999999999999999999543   12233445565544  4445555443

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=99.84  E-value=3.7e-21  Score=204.55  Aligned_cols=220  Identities=17%  Similarity=0.257  Sum_probs=164.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCCChh-hh-----------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPMSAP-YW-----------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~-~~-----------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++    ++|+|+|++|+|+|.++.... ++                 
T Consensus       112 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~  191 (436)
T cd07122         112 AIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV  191 (436)
T ss_pred             HHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH
Confidence            57899999999999999999999999999888875    689999999999985433211 10                 


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|+|||++|||+|+++++++.     
T Consensus       192 ~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~-----  262 (436)
T cd07122         192 KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASE----QSVIVDDEIYDEVRAELKRRG-----  262 (436)
T ss_pred             HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCC----CEEEEechhHHHHHHHHHHhc-----
Confidence                                                       0345554    899999999999999998875     


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                                +++++..+..++.+.+.+.   +..+              .|.+                          
T Consensus       263 ----------~~l~~~~~~~~v~~~~~~~---~~~~--------------gp~~--------------------------  289 (436)
T cd07122         263 ----------AYFLNEEEKEKLEKALFDD---GGTL--------------NPDI--------------------------  289 (436)
T ss_pred             ----------ceecCHHHHHHHHHHhhcC---CCCc--------------Cccc--------------------------
Confidence                      3566666666665544321   1110              0111                          


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                              +..+.+++..++..+.+.|++++.++              
T Consensus       290 ----------------------------------------~~~~~~~~~~~~~~~~~~ga~vl~~~--------------  315 (436)
T cd07122         290 ----------------------------------------VGKSAQKIAELAGIEVPEDTKVLVAE--------------  315 (436)
T ss_pred             ----------------------------------------cCcCHHHHHHHcCCCCCCCCeEEEEe--------------
Confidence                                                    11223344444455555666666544              


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCC----CcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT----KYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP  332 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~----~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~  332 (605)
                      +++++++|+++ +|.||||++|++|+|+||||+++|++    +|||++||||+|.++++++++++++|+||||.+..   
T Consensus       316 ~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~---  391 (436)
T cd07122         316 ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSS---  391 (436)
T ss_pred             cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCcc---
Confidence            46788899988 56799999999999999999999997    89999999999999999999999999999996553   


Q ss_pred             CCCccccccCCC
Q psy1099         333 QAPFGGFKESGI  344 (605)
Q Consensus       333 ~~pfGG~~~SG~  344 (605)
                         ||+.|.++.
T Consensus       392 ---~~~~g~~~~  400 (436)
T cd07122         392 ---LGGIGDTYN  400 (436)
T ss_pred             ---ccccCccCC
Confidence               555554443

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=99.83  E-value=6.7e-21  Score=202.41  Aligned_cols=242  Identities=17%  Similarity=0.089  Sum_probs=175.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHc---CCCCccEEEecCCCCCChh-h-------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA---GFPDGVISVLPGYGPMSAP-Y-------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~a---GlP~gvv~vv~g~~~~~~~-~-------------------   58 (605)
                      +++++++||++||+||+|||+.+|+++.++++++.++   |+|++++++++|.+..... +                   
T Consensus       116 ~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~  195 (397)
T cd07077         116 GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVD  195 (397)
T ss_pred             HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHH
Confidence            3689999999999999999999999999999999987   9999999999875432110 0                   


Q ss_pred             --hh----hhcCCcccccceeEecccc-HHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcE
Q psy1099          59 --WR----KSCLSPLAYRSRTYVQEDI-YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK  131 (605)
Q Consensus        59 --~~----~~~~~~~~~~~~~~v~~~i-~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~  131 (605)
                        ..    .+++....-.+-++|+++- .+...+.++..                                        +
T Consensus       196 ~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~----------------------------------------~  235 (397)
T cd07077         196 AAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDS----------------------------------------K  235 (397)
T ss_pred             HHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHh----------------------------------------h
Confidence              11    2222211223556666442 22222222111                                        1


Q ss_pred             EEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHc
Q psy1099         132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI  211 (605)
Q Consensus       132 ~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i  211 (605)
                      +.- |+.+                          .+|-..+++.+..|++++.+.+                        
T Consensus       236 ~~~-GQ~C--------------------------~a~~~v~V~~~i~d~~~~~l~~------------------------  264 (397)
T cd07077         236 FFD-QNAC--------------------------ASEQNLYVVDDVLDPLYEEFKL------------------------  264 (397)
T ss_pred             ccC-CccC--------------------------CCCeEEEEehhhhHHHHHHHHH------------------------
Confidence            111 2211                          1222345555666666654432                        


Q ss_pred             ccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHH----HH
Q psy1099         212 NAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD----EV  287 (605)
Q Consensus       212 ~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~----ea  287 (605)
                                     .++   ++|+++..|+     .++++.||      +++++++||+||||++|++|+|+|    +|
T Consensus       265 ---------------~~~---~~G~~~~~g~-----~~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~a  315 (397)
T cd07077         265 ---------------KLV---VEGLKVPQET-----KPLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENA  315 (397)
T ss_pred             ---------------HHH---hcCcCcCCCc-----eeeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHH
Confidence                           111   1467777665     24677776      789999999999999999999996    66


Q ss_pred             HHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc--CCCCCccccc--cCCCchHHh-HHhhhcccceeEE
Q psy1099         288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV--VPQAPFGGFK--ESGIGRELG-KAALDEYTELKTV  362 (605)
Q Consensus       288 i~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~pfGG~~--~SG~G~~~G-~~~~~~~~~~k~~  362 (605)
                      ++++|+++|||++||||+|.+++.++++++++|+|+||.....  ....||||.+  .||+|+++| .++++.|++.|++
T Consensus       316 i~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v  395 (397)
T cd07077         316 WMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRL  395 (397)
T ss_pred             HHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEe
Confidence            6688999999999999999999999999999999999965443  3678999999  899999999 9999999999876


Q ss_pred             E
Q psy1099         363 T  363 (605)
Q Consensus       363 t  363 (605)
                      .
T Consensus       396 ~  396 (397)
T cd07077         396 V  396 (397)
T ss_pred             e
Confidence            4

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=99.83  E-value=1.5e-20  Score=192.20  Aligned_cols=247  Identities=32%  Similarity=0.480  Sum_probs=203.3

Q ss_pred             ccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh-----------------------
Q psy1099           3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW-----------------------   59 (605)
Q Consensus         3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~-----------------------   59 (605)
                      ...++.||++||+|+-||.|+||+.+..-+++++|||+|++++|+++|+|+.++..+                       
T Consensus       254 tGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~  333 (769)
T COG4230         254 TGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQR  333 (769)
T ss_pred             HhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHH
Confidence            356899999999999999999999999999999999999999999999998543211                       


Q ss_pred             ---------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099          60 ---------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR   94 (605)
Q Consensus        60 ---------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~   94 (605)
                                                                   .|+|.+-    ..+|+++++.|..++.|...|..+
T Consensus       334 ~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSAL----RvLclQ~DvAd~~l~mLKGAm~el  409 (769)
T COG4230         334 QLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSAL----RVLCLQEDVADRILTMLKGAMAEL  409 (769)
T ss_pred             HHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhh----hhhhhhhhHHHHHHHHHHHHHHHh
Confidence                                                         0234332    668999999999999999999999


Q ss_pred             ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      ++|+|..-.+++||+|+..+.+.+.++|..-...|.++.--..                                     
T Consensus       410 ~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~-------------------------------------  452 (769)
T COG4230         410 RVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAA-------------------------------------  452 (769)
T ss_pred             ccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccC-------------------------------------
Confidence            9999999999999999999999999998775555433210000                                     


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                        .  .....|.|++|
T Consensus       453 ------------------------------------------------------------------~--~~~q~GtFv~P  464 (769)
T COG4230         453 ------------------------------------------------------------------P--NSLQKGTFVAP  464 (769)
T ss_pred             ------------------------------------------------------------------C--CccCCceeeCc
Confidence                                                                              0  00136889999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecC--CHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEec--cCCc
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINC--YQAV  330 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~--d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~--~~~~  330 (605)
                      |++.-  ++..-++.|+|||||.|++|+  ++++.|+-+|.++|||+.+|||+..+.+.++..++++|++|||.  .+.+
T Consensus       465 tl~El--~~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAV  542 (769)
T COG4230         465 TLIEL--ENLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAV  542 (769)
T ss_pred             eeEEc--CCHHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeE
Confidence            98853  234558999999999999995  78999999999999999999999999999999999999999994  4566


Q ss_pred             CCCCCccccccCCCch-HHhHHhhhccccee
Q psy1099         331 VPQAPFGGFKESGIGR-ELGKAALDEYTELK  360 (605)
Q Consensus       331 ~~~~pfGG~~~SG~G~-~~G~~~~~~~~~~k  360 (605)
                      ..-.||||.+.||.|. .+|+..+..+...+
T Consensus       543 VGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~  573 (769)
T COG4230         543 VGVQPFGGEGLSGTGPKAGGPLYLLRLVSER  573 (769)
T ss_pred             EeeccCCCCCCCCCCCCCCChHHHHHHHhcC
Confidence            7889999999999995 45666666555433

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=99.82  E-value=1.2e-19  Score=191.41  Aligned_cols=241  Identities=43%  Similarity=0.671  Sum_probs=179.3

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCCh-hhhhhhcCCcccccceeEeccccH
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA-PYWRKSCLSPLAYRSRTYVQEDIY   80 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~-~~~~~~~~~~~~~~~~~~v~~~i~   80 (605)
                      ++|++++||++||+||+|||+.+|+++..++++|.++|+|++++++++|+++... .++.+..++.+.|+++        
T Consensus       109 ~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs--------  180 (367)
T cd06534         109 AAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGS--------  180 (367)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECC--------
Confidence            4678999999999999999999999999999999999999999999999765332 2333332232222221        


Q ss_pred             HHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHH-cCc--EEEeCCcccCCCCccccceEeccCCCc
Q psy1099          81 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE-QGG--KLEAGGKRKGDKGYFIEPTVFSNVTDD  157 (605)
Q Consensus        81 ~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~-~G~--~~~~gG~~~~~~~~~v~P~vv~~~~~~  157 (605)
                      ++...                                   .|..... .+.  .+++||++         |.+|+.. ++
T Consensus       181 ~~~~~-----------------------------------~v~~~~~~~~~~~~~e~~g~~---------~~iV~~~-ad  215 (367)
T cd06534         181 TAVGK-----------------------------------AIMKAAAENLKPVTLELGGKS---------PVIVDED-AD  215 (367)
T ss_pred             HHHHH-----------------------------------HHHHHHhcCCCeEEEEcCCCC---------eEEECCC-CC
Confidence            11111                                   1111111 112  45566765         7777765 34


Q ss_pred             hhhhcc-cccc----cee-------EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHH
Q psy1099         158 FKIARE-EIFG----PVQ-------TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVL  225 (605)
Q Consensus       158 ~~~~~~-~ifg----p~~-------~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~  225 (605)
                      ++.+.+ .+++    ..|       .+++.+..|++++++                                        
T Consensus       216 ~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l----------------------------------------  255 (367)
T cd06534         216 LDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKL----------------------------------------  255 (367)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHhh----------------------------------------
Confidence            433332 2211    122       222223333333321                                        


Q ss_pred             HhhhhccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecC
Q psy1099         226 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT  305 (605)
Q Consensus       226 ~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~  305 (605)
                         .                         ||+.++++++++++||+||||++|++|+|+||||+++|++++||++||||+
T Consensus       256 ---~-------------------------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~  307 (367)
T cd06534         256 ---V-------------------------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTR  307 (367)
T ss_pred             ---c-------------------------eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECC
Confidence               1                         777888899999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHhhcccEEEeccCCc-CCCCCccccccCCCchHHhHHhhhcccceeEEE
Q psy1099         306 NIDTANTFAHAINAGSVWINCYQAV-VPQAPFGGFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       306 d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |...++++++++++|+|+||+.+.. .+..||||.+.||+|+++|.++++.|+..|.++
T Consensus       308 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~  366 (367)
T cd06534         308 DLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV  366 (367)
T ss_pred             CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence            9999999999999999999976655 788999999999999999999999999998764

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=99.76  E-value=1.1e-18  Score=183.69  Aligned_cols=94  Identities=20%  Similarity=0.227  Sum_probs=78.9

Q ss_pred             hhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCccccccCC
Q psy1099         264 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESG  343 (605)
Q Consensus       264 ~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG  343 (605)
                      +++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++|++++++|.|+||.+....+..|||=-..-|
T Consensus       298 ~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~  377 (398)
T TIGR00407       298 KTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVG  377 (398)
T ss_pred             cccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeE
Confidence            78999999999999999999999999999999999999999999999999999999999999877777778998323222


Q ss_pred             C----chHHhHHhhhccc
Q psy1099         344 I----GRELGKAALDEYT  357 (605)
Q Consensus       344 ~----G~~~G~~~~~~~~  357 (605)
                      +    ....|..+++.++
T Consensus       378 ~~~~~~~~rg~~~~~~~~  395 (398)
T TIGR00407       378 ISTQKLHARGPMGLEALT  395 (398)
T ss_pred             EecCCCcCCCCcCHHHhc
Confidence            2    3344555555443

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.62  E-value=3.8e-15  Score=149.33  Aligned_cols=262  Identities=17%  Similarity=0.231  Sum_probs=168.8

Q ss_pred             chhHHHhhcCcEEEccCCCCchhHHHHHHHHHHc----CCCCccEEEecCCCCCChhhhhhhcCCcccccceeEeccccH
Q psy1099           5 KWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIY   80 (605)
Q Consensus         5 ~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~a----GlP~gvv~vv~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~   80 (605)
                      ..+-||++||+||+|.+..+..|...|+++++++    |+|++.+|+++-....                          
T Consensus       132 aaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~aVqli~~~~R~--------------------------  185 (417)
T COG0014         132 AAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADAVQLIEDTDRE--------------------------  185 (417)
T ss_pred             HHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHHhhhccCCCHH--------------------------
Confidence            4578999999999999999999999998887665    9999999999753211                          


Q ss_pred             HHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhh
Q psy1099          81 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  160 (605)
Q Consensus        81 ~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~  160 (605)
                        -+..++..-..+.+                                  .+..||.+                  ..+.
T Consensus       186 --~v~~ll~l~~yiD~----------------------------------iIPRGg~~------------------Li~~  211 (417)
T COG0014         186 --EVLELLRLDGYIDL----------------------------------VIPRGGAG------------------LIRR  211 (417)
T ss_pred             --HHHHHHhhcCceeE----------------------------------EEcCCcHH------------------HHHH
Confidence              11111111000000                                  11222221                  1111


Q ss_pred             hccccccce---------eEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhc
Q psy1099         161 AREEIFGPV---------QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSG  231 (605)
Q Consensus       161 ~~~~ifgp~---------~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a  231 (605)
                      ++++.--|+         +++....++|.++..+.+.+-.        -+...+.+...+-...+...++.++.+.+.  
T Consensus       212 v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtq--------rPs~CNA~EtLLVh~~ia~~fLp~l~~~l~--  281 (417)
T COG0014         212 VVENATVPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQ--------RPSVCNAAETLLVHRAIAKSFLPKLANALQ--  281 (417)
T ss_pred             HHhCCcCCEEecCcceEEEEecccCCHHHHHHHHHcccCC--------CCcccchHHHHHcCHHHHHHhHHHHHHHHH--
Confidence            112211221         1233345788888887654432        233444444444333444455555555555  


Q ss_pred             cccCCeeeeCCCccCCCCeeeeeeEeec--cCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHH
Q psy1099         232 VEQGGKLEAGGKRKGDKGYFIEPTVFSN--VTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDT  309 (605)
Q Consensus       232 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~--v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~  309 (605)
                       +.|-++.......         .++.+  .+....=|..|...++|.|..|++.||||+++|.+..+|+-+|-|+|...
T Consensus       282 -~~gvelr~d~~~~---------~~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~  351 (417)
T COG0014         282 -EAGVELRGDAEAL---------ALLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYAN  351 (417)
T ss_pred             -hcCeEEEcCHHHH---------HhccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHH
Confidence             2343443322110         11112  44455668999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccEEEeccCCcCCCCCccccccCCC----chHHhHHhhhcccceeEEEecC
Q psy1099         310 ANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI----GRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       310 ~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~----G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      +++|.+++++..||||..+.+..+.-||--..-|+    .+..|+.+++..+..|++....
T Consensus       352 a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~  412 (417)
T COG0014         352 AERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGD  412 (417)
T ss_pred             HHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCC
Confidence            99999999999999998877766655653333333    3556888899999998876543

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=99.59  E-value=1.6e-13  Score=146.58  Aligned_cols=178  Identities=14%  Similarity=0.055  Sum_probs=115.2

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCC-CcEEEcCCC----CHHHHH----------hcccccccCeEEE
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGK-SPLVICADA----DVDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~-~p~iV~~da----d~~~a~----------~~~~c~a~~~v~v  422 (605)
                      +...+||+.   .+++.+.+.++. +  +.++|+||| +++|+++++    |++.++          .|+.|.+++++||
T Consensus       195 D~i~~~Gs~---~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V  268 (422)
T cd07080         195 DAVVAWGGE---EAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRYDQQACSSPQVVFV  268 (422)
T ss_pred             CEEEEeCCH---HHHHHHHHhCCC-C--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEE
Confidence            445678875   899999877763 4  469999999 556666668    998876          3445999999999


Q ss_pred             eccc---HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEee
Q psy1099         423 QEDI---YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  499 (605)
Q Consensus       423 ~~~~---~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~  499 (605)
                      |+++   +++|.++|.++++++.-..|..      ++ +.....++...-..+...+.+...    ....    .-||+.
T Consensus       269 ~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~r~~~~~~~~~~~~----~~~~----~~~v~~  333 (422)
T cd07080         269 EKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARARLEAEFYELKGGV----SRDL----GWTVII  333 (422)
T ss_pred             ECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHHHHHHHHHHHhcCC----CCCC----CeEEEE
Confidence            9999   9999999999999876433321      11 233333332222222211211111    0111    124443


Q ss_pred             cCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCc
Q psy1099         500 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS  562 (605)
Q Consensus       500 ~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~  562 (605)
                      +..+.  +.. -..+=.+.|.++++++|++..++.  |=.|.++|..+.+. .++++++..-+
T Consensus       334 ~~~~~--~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~~G  390 (422)
T cd07080         334 SDEIG--LEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAAAG  390 (422)
T ss_pred             eCCCC--ccC-CCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHHcC
Confidence            32222  111 233446788899999999999985  77899999999887 77888877544

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.41  E-value=6.3e-13  Score=133.50  Aligned_cols=190  Identities=17%  Similarity=0.202  Sum_probs=154.3

Q ss_pred             ccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hccc-----ccccCeEEEecccHHHHHHHHHHHHhh
Q psy1099         370 YTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYCF-----VCAGSRTYVQEDIYDTFVKKAVEKAAA  440 (605)
Q Consensus       370 ~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~~~-----c~a~~~v~v~~~~~~~~~~~l~~~~~~  440 (605)
                      +.|..+.+........||+--.-|+|.+||+++||+|+|.    +++.     |++...++||+.+.++|+.+|.+.+..
T Consensus       203 RGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtqrPs~CNA~EtLLVh~~ia~~fLp~l~~~l~~  282 (417)
T COG0014         203 RGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQRPSVCNAAETLLVHRAIAKSFLPKLANALQE  282 (417)
T ss_pred             CCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHHHHHHHHcccCCCCcccchHHHHHcCHHHHHHhHHHHHHHHHh
Confidence            7889999988886678888888899999999999999996    4433     999999999999999999999887763


Q ss_pred             cccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeec--CCCCCcccccceeeeeee
Q psy1099         441 RKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN--VTDDFKIAREEIFGPVQT  518 (605)
Q Consensus       441 ~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~--~~~~~~~~~eE~FGPvl~  518 (605)
                      .                                  |.++....+...         ++.+  .+....-|..|..-+++.
T Consensus       283 ~----------------------------------gvelr~d~~~~~---------~~~~~~~~A~e~Dw~tEyLd~ila  319 (417)
T COG0014         283 A----------------------------------GVELRGDAEALA---------LLPDAVKPATEEDWDTEYLDLILA  319 (417)
T ss_pred             c----------------------------------CeEEEcCHHHHH---------hccccCCCCchhhHHHHhhhheeE
Confidence            2                                  112221111000         0001  233345578899999999


Q ss_pred             eEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCc-ccCCCCcccccCCCCCCCh----------hHHHHH
Q psy1099         519 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-AVVPQAPFGGFKESGIGRE----------LGKAAL  587 (605)
Q Consensus       519 i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~-~~~~~~PfGG~~~SG~G~~----------~g~~~~  587 (605)
                      |-.+++++|||+++|+...++|-+|-|+|...+++|...+++.. .+|.+.-|-.-++-|+|.+          .|+-|+
T Consensus       320 vkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGL  399 (417)
T COG0014         320 VKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGL  399 (417)
T ss_pred             EEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCCh
Confidence            99999999999999999999999999999999999999999987 6777888998888899876          589999


Q ss_pred             HHhhhceEEEEcCCC
Q psy1099         588 DEYTELKTVTESPLR  602 (605)
Q Consensus       588 ~~~~~~k~v~~~~~~  602 (605)
                      +++|..|.++.....
T Consensus       400 e~LTs~Kyiv~G~Gq  414 (417)
T COG0014         400 EALTSYKYIVRGDGQ  414 (417)
T ss_pred             hhhcceeEEEeCCce
Confidence            999999999876543

>KOG2449|consensus

Probab=99.40  E-value=4.8e-13  Score=113.43  Aligned_cols=93  Identities=35%  Similarity=0.553  Sum_probs=82.7

Q ss_pred             CCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEec
Q psy1099         247 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINC  326 (605)
Q Consensus       247 ~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~  326 (605)
                      .++.|..||+|. |.|+|.++.||+|||||....-.++||||.++|.++||....|||.|.+.++++.+..++|.+.+|.
T Consensus        62 a~~~f~~~tiLs-vtP~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~  140 (157)
T KOG2449|consen   62 AEGNFVGPTILS-VTPNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANV  140 (157)
T ss_pred             ccCCcccceEEE-ecCCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccc
Confidence            367899999999 9999999999999999999999999999999999999999999999999999999999999999996


Q ss_pred             c-CCcCCCCCccccc
Q psy1099         327 Y-QAVVPQAPFGGFK  340 (605)
Q Consensus       327 ~-~~~~~~~pfGG~~  340 (605)
                      . +...+...|.|-+
T Consensus       141 ~ip~ilk~~sfsg~~  155 (157)
T KOG2449|consen  141 PIPVILKMFSFSGDR  155 (157)
T ss_pred             cccccccceeccccC
Confidence            4 3334444555543

>KOG2449|consensus

Probab=99.35  E-value=1.8e-12  Score=109.92  Aligned_cols=125  Identities=30%  Similarity=0.388  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHc-CCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQ-GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~-g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      ...+.+++..+.+++-+...+.+|.     .+...|+.++++.-.-. |..+..-   ..++|+|..||++. |+|.|.+
T Consensus        10 sW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~---~ya~~~f~~~tiLs-vtP~ms~   80 (157)
T KOG2449|consen   10 SWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLP---GYAEGNFVGPTILS-VTPNMSC   80 (157)
T ss_pred             hhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEee---ccccCCcccceEEE-ecCCcce
Confidence            3445566777888888877777777     55567777777762111 2222221   13579999999998 9999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCc
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS  562 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~  562 (605)
                      +.|||||||+..+.-++++|||.++|..+||....|||.+.+.+.++....++|.
T Consensus        81 ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~q  135 (157)
T KOG2449|consen   81 YKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQ  135 (157)
T ss_pred             eHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccc
Confidence            9999999999999999999999999999999999999999999999999999887

>KOG4165|consensus

Probab=98.96  E-value=1.4e-08  Score=98.96  Aligned_cols=265  Identities=19%  Similarity=0.216  Sum_probs=162.9

Q ss_pred             hhHHHhhcCcEEEccCCCCchhHHHHHHHHHHc----CCCCccEEEecCCCCCChhhhhhhcCCcccccceeEeccccHH
Q psy1099           6 WGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYD   81 (605)
Q Consensus         6 ~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~a----GlP~gvv~vv~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~   81 (605)
                      .+-||+.||.+++|....+..+...+.++.++|    |.|.+.+++|+. .+++.+++...-.-      -+.+++..  
T Consensus       130 asLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~I------DLvIPRGS--  200 (433)
T KOG4165|consen  130 ASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYI------DLVIPRGS--  200 (433)
T ss_pred             HHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhhe------eEEecCCc--
Confidence            467999999999999999999999999988887    678888999975 34444433321000      00111110  


Q ss_pred             HHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhh
Q psy1099          82 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  161 (605)
Q Consensus        82 ~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~  161 (605)
                                                           .++++...+. .++.+-|...   |      |.          
T Consensus       201 -------------------------------------s~LVr~Ik~~-tkIPVLGHA~---G------ic----------  223 (433)
T KOG4165|consen  201 -------------------------------------SDLVRSIKDT-TKIPVLGHAE---G------IC----------  223 (433)
T ss_pred             -------------------------------------HHHHHHHhhc-ccCccccccc---c------ee----------
Confidence                                                 1111111111 1232222210   0      00          


Q ss_pred             ccccccceeEEEecCCHHHHHHHHhccc--CcceeeeeccchhhHHHHH-HHcccCccchHhHHHHHHhhhhccccCCee
Q psy1099         162 REEIFGPVQTIIKFKTLDEVIERANDTK--YGLASGIVTTNIDTANTFA-HAINAGSVDAEMFTKVLNYIKSGVEQGGKL  238 (605)
Q Consensus       162 ~~~ifgp~~~~v~~~~~~~~i~~~~~~~--~~l~~~~~~~~~~~~~~~~-~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~  238 (605)
                             -.++.+..+++.+.++..+.+  |..          ..+.+. ..|+.-.....+++.+..++.+   .|.++
T Consensus       224 -------hvYvd~dad~~kA~riv~DaK~dYPA----------aCNAmETLLIh~dl~~~~~~~~l~~~l~~---~gVtl  283 (433)
T KOG4165|consen  224 -------HVYVDKDADLDKAKRIVRDAKCDYPA----------ACNAMETLLIHKDLEQSPFFDDLINMLKE---EGVTL  283 (433)
T ss_pred             -------EEEeccccCHHHHHHHHhcccCCCch----------hhhhHHHHhccHhhhhcchHHHHHHHHHh---cCeEE
Confidence                   012222345777777776543  322          222222 2233322333556666666653   34454


Q ss_pred             eeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhh
Q psy1099         239 EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN  318 (605)
Q Consensus       239 ~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~  318 (605)
                      ..|- +...        ++.--++..+-++.|.-.-.++|-.++|.++||+++|.++..|+-+|.|+|...+++|.+.++
T Consensus       284 ~agp-kl~~--------~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VD  354 (433)
T KOG4165|consen  284 HAGP-KLAA--------LLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVD  354 (433)
T ss_pred             ecCh-hHHh--------hcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccc
Confidence            4443 2111        111125566778889888899999999999999999999999999999999999999999999


Q ss_pred             cccEEEeccCCcCCCCCccccccCCCc----hHHhHHhhhcccceeEEEec
Q psy1099         319 AGSVWINCYQAVVPQAPFGGFKESGIG----RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       319 ~g~v~iN~~~~~~~~~pfGG~~~SG~G----~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +.+|++|..+.+..+.-||--..-|+.    ...|+.+++-....|++...
T Consensus       355 Sa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG  405 (433)
T KOG4165|consen  355 SACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG  405 (433)
T ss_pred             hhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence            999999988887777777633333432    23466666666666665543

>KOG4165|consensus

Probab=98.85  E-value=8.9e-09  Score=100.30  Aligned_cols=188  Identities=19%  Similarity=0.145  Sum_probs=139.5

Q ss_pred             cHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hcc-----cccccCeEEEecccH-HHHHHHHHHHHhh
Q psy1099         371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYC-----FVCAGSRTYVQEDIY-DTFVKKAVEKAAA  440 (605)
Q Consensus       371 ~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~~-----~c~a~~~v~v~~~~~-~~~~~~l~~~~~~  440 (605)
                      ....+++.....+.+||.....|.|.++|++|||+++|.    .++     -|++...+++|++.. ..|++.+...+. 
T Consensus       199 GSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~-  277 (433)
T KOG4165|consen  199 GSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYPAACNAMETLLIHKDLEQSPFFDDLINMLK-  277 (433)
T ss_pred             CcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHHHHHhcccCCCchhhhhHHHHhccHhhhhcchHHHHHHHHH-
Confidence            344565555555679999999999999999999999996    222     299999999999743 334433332222 


Q ss_pred             cccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccccceeeeeeeeE
Q psy1099         441 RKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  520 (605)
Q Consensus       441 ~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~eE~FGPvl~i~  520 (605)
                                                       +.|.++.+|.+- ..-..|        .+|...-+..|.-.=.+.|-
T Consensus       278 ---------------------------------~~gVtl~agpkl-~~~l~~--------~p~e~~s~~~Ey~~l~~~ie  315 (433)
T KOG4165|consen  278 ---------------------------------EEGVTLHAGPKL-AALLKF--------SPPEAKSFNTEYGSLECTIE  315 (433)
T ss_pred             ---------------------------------hcCeEEecChhH-HhhcCc--------CCchhhhhhhhhcchheeee
Confidence                                             234444444321 111111        13344556777777788999


Q ss_pred             eeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCc-ccCCCCcccccCCCCCCCh----------hHHHHHHH
Q psy1099         521 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-AVVPQAPFGGFKESGIGRE----------LGKAALDE  589 (605)
Q Consensus       521 ~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~-~~~~~~PfGG~~~SG~G~~----------~g~~~~~~  589 (605)
                      .+++.++||+.+|....+.|-+|.|+|...+++|...+++.+ +++.+..|..--.-|+|.+          .|+.|++.
T Consensus       316 vV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveG  395 (433)
T KOG4165|consen  316 VVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEG  395 (433)
T ss_pred             ecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccc
Confidence            999999999999999999999999999999999999999877 7888999987777788765          48889999


Q ss_pred             hhhceEEEEcCC
Q psy1099         590 YTELKTVTESPL  601 (605)
Q Consensus       590 ~~~~k~v~~~~~  601 (605)
                      .+..|++++...
T Consensus       396 Llttkw~lRG~g  407 (433)
T KOG4165|consen  396 LLTTKWLLRGKG  407 (433)
T ss_pred             eeeeeeEEecCC
Confidence            999999886543

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=98.29  E-value=7.9e-06  Score=76.95  Aligned_cols=150  Identities=17%  Similarity=0.185  Sum_probs=109.1

Q ss_pred             CcEEEcCCCCHHHHH-------hccc-ccccCeEEEecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHH
Q psy1099         395 SPLVICADADVDMAY-------YYCF-VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVL  466 (605)
Q Consensus       395 ~p~iV~~dad~~~a~-------~~~~-c~a~~~v~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~  466 (605)
                      +-+||++|.|++.|+       ..-| ..+...++|||++.|+|+++++.+++.+.      +.     +.+...+.|..
T Consensus         6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~~~~VatVlVqEsireefi~rvr~~m~pl~------~~-----va~Hpny~rsl   74 (215)
T PF07368_consen    6 QLMIVFEDGDLNSAMHYLLESLHNPFAPGAVATVLVQESIREEFIERVRSRMKPLS------PQ-----VANHPNYLRSL   74 (215)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHhCcccCCcEEEEEEeHHHHHHHHHHHHHhCccCC------hh-----hccCcHHHHHH
Confidence            347999999999997       1222 55667899999999999999998886442      21     23445566666


Q ss_pred             HHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcC--CCCceEEEE
Q psy1099         467 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT--KYGLASGIV  544 (605)
Q Consensus       467 ~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~--~~gL~a~vf  544 (605)
                      +.++.   .+++++.+....  .-..-.|.|+.+.+.+  .+- +--.+|+++-.|++..||++++++-  ++ -+.+||
T Consensus        75 ~~i~~---l~~~~I~~~~~~--~~~~aSPilV~d~~h~--~fg-~~PTgViTlhtFRt~~Ea~~l~~kE~l~f-~SVsiW  145 (215)
T PF07368_consen   75 KKIKC---LNAKTIVADFEN--VPPPASPILVCDFTHS--YFG-DGPTGVITLHTFRTPKEAIELCAKETLPF-DSVSIW  145 (215)
T ss_pred             HHHHh---cCCeEEEecccC--CCCCCCCEEEcCCCHH--HcC-CCCCeEEEEEccCCHHHHHHHHhcCCCCc-ceEEEe
Confidence            66554   588888874321  1233478888876653  111 1334799999999999999999874  44 488999


Q ss_pred             cCCHHHHHHHHHHcccCccc
Q psy1099         545 TTNIDTANTFAHAINAGSAV  564 (605)
Q Consensus       545 t~d~~~~~~~~~~~~~G~~~  564 (605)
                      ++-...+-+++.++.+..+.
T Consensus       146 ~ekla~~Yel~~~l~~~~f~  165 (215)
T PF07368_consen  146 NEKLASAYELAARLPCDTFY  165 (215)
T ss_pred             CcHHHHHHHHHHhCCCCEEE
Confidence            99999999999999988743

The function of this family is unknown.

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=97.30  E-value=0.0023  Score=60.60  Aligned_cols=136  Identities=19%  Similarity=0.267  Sum_probs=94.7

Q ss_pred             ccce---eEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCC
Q psy1099         166 FGPV---QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGG  242 (605)
Q Consensus       166 fgp~---~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg  242 (605)
                      |+|.   -.++.+...|++++++.+....+...+-                   +-..+.|..+.++   .-+++.+.+.
T Consensus        31 f~~~~VatVlVqEsireefi~rvr~~m~pl~~~va-------------------~Hpny~rsl~~i~---~l~~~~I~~~   88 (215)
T PF07368_consen   31 FAPGAVATVLVQESIREEFIERVRSRMKPLSPQVA-------------------NHPNYLRSLKKIK---CLNAKTIVAD   88 (215)
T ss_pred             ccCCcEEEEEEeHHHHHHHHHHHHHhCccCChhhc-------------------cCcHHHHHHHHHH---hcCCeEEEec
Confidence            6665   3567888999999999876544421110                   0012333444443   3578888874


Q ss_pred             CccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCC--CcceeEEEecCChHHHHHHHHHhhcc
Q psy1099         243 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT--KYGLASGIVTTNIDTANTFAHAINAG  320 (605)
Q Consensus       243 ~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~--~~glaa~vft~d~~~~~~~~~~~~~g  320 (605)
                      ...  ....-.|.++.+.+.+  .+.. --.+|+++.+|++..||+++++.-  +|+ +.+||++..+.+..++.+++.-
T Consensus        89 ~~~--~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~~~  162 (215)
T PF07368_consen   89 FEN--VPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLPCD  162 (215)
T ss_pred             ccC--CCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCCCC
Confidence            321  1222358888887754  3333 334599999999999999999975  344 9999999999999999999999


Q ss_pred             cEEEeccCC
Q psy1099         321 SVWINCYQA  329 (605)
Q Consensus       321 ~v~iN~~~~  329 (605)
                      .++||+...
T Consensus       163 ~f~iNC~~V  171 (215)
T PF07368_consen  163 TFYINCFNV  171 (215)
T ss_pred             EEEEEeccC
Confidence            999998654

The function of this family is unknown.

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=96.57  E-value=0.66  Score=49.40  Aligned_cols=40  Identities=15%  Similarity=0.148  Sum_probs=35.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCC
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPD   42 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~   42 (605)
                      .++.++-+|.+||..|+|+|+..|..+..|++.|.+. .|.
T Consensus       103 ~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~  142 (399)
T PF05893_consen  103 GFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPE  142 (399)
T ss_pred             HHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-Ccc
Confidence            4677899999999999999999999999999999886 554

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=96.17  E-value=0.67  Score=49.36  Aligned_cols=215  Identities=14%  Similarity=0.091  Sum_probs=109.1

Q ss_pred             cccceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEec
Q psy1099         355 EYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQE  424 (605)
Q Consensus       355 ~~~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~  424 (605)
                      ...+.+.++|+.   .+-+.+.+.+.  ..++.+.-.--.+-.+|+.+++++.++          .+.-|.+++.+|+..
T Consensus       167 ~~~D~vv~wGgd---~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~ifv~~  241 (399)
T PF05893_consen  167 QQADAVVAWGGD---ETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVIFVET  241 (399)
T ss_pred             HHCCEEEEeCCH---HHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEEEEEC
Confidence            445555666663   44455544221  223333333344556777777777664          333399999999983


Q ss_pred             ---ccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHH--HHHHHHcCCeEEeCCcccCCCCeeEeeEEee
Q psy1099         425 ---DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNY--IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  499 (605)
Q Consensus       425 ---~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~--i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~  499 (605)
                         .-.++|.++|.+.+.+..---|....+    .-...........  +..+...+.++..+..        -.-||+.
T Consensus       242 g~~~~~~~f~~~L~~~L~~~~~~~p~~~~s----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~--------~~~~V~~  309 (399)
T PF05893_consen  242 GDGDSVEEFAERLAEALERAAERYPRGELS----IDEAAAISSLRAEAELRYALDGEYRVWSSDD--------NSWTVIV  309 (399)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhCCCcCCC----HHHHHHHHHHHHHHHHHHHhcCCcceeecCC--------CCEEEEE
Confidence               345778888877666543111211100    0011111121111  2223333334442211        1235554


Q ss_pred             cCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcc-cCcccCCCCcccccCCCCC
Q psy1099         500 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN-AGSAVVPQAPFGGFKESGI  578 (605)
Q Consensus       500 ~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~-~G~~~~~~~PfGG~~~SG~  578 (605)
                      ...+  .. .....+=.+.|.++++.+|++..++....=.|++++... +...++++.+. .|-.  --.|.|-...--.
T Consensus       310 ~~~~--~~-~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~--Riv~~G~m~~~~~  383 (399)
T PF05893_consen  310 SPEP--PL-LPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVD--RIVPLGQMLDFDP  383 (399)
T ss_pred             CCCc--cc-ccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCe--eeCCCCcCCCCCC
Confidence            3222  22 122234478899999999999999887322688887655 55566666444 4431  1123333322111


Q ss_pred             C-ChhHHHHHHHhhh
Q psy1099         579 G-RELGKAALDEYTE  592 (605)
Q Consensus       579 G-~~~g~~~~~~~~~  592 (605)
                      | ..-|.+.+..|++
T Consensus       384 g~~hDG~~~L~~lvR  398 (399)
T PF05893_consen  384 GWPHDGMYPLRRLVR  398 (399)
T ss_pred             CCCcCCHhHHHHHhC
Confidence            2 3346677777765

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	605
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		4e-63
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		5e-63
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		2e-58
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		1e-62
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		2e-62
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		3e-62
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		3e-62
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		4e-62
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		4e-62
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		4e-62
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		1e-61
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		1e-60
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		6e-59
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		8e-59
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-44
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		2e-44
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		5e-44
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		7e-44
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		8e-44
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		8e-44
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		9e-44
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-43
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		1e-43
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		4e-43
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		4e-43
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		3e-42
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		2e-39
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		5e-42
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		6e-41
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		6e-40
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		4e-39
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-38
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		7e-37
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		2e-37
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		4e-37
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		1e-36
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		5e-37
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		5e-37
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		1e-36
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		4e-36
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		3e-34
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		9e-33
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		1e-32
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		1e-32
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-32
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		3e-32
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		1e-31
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		1e-31
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		2e-30
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		1e-29
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		2e-29
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		4e-27
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		4e-27
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		7e-27
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		2e-26
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		4e-26
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		6e-26
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		8e-26
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		9e-26
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		9e-26
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		1e-25
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		2e-25
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		3e-25
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		3e-24
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		7e-24
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		4e-21
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		6e-21
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		6e-20
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		2e-19
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		4e-19
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		7e-19
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		7e-19
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		3e-18
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		1e-16
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		2e-16
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		3e-16
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		6e-16
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		6e-16
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		9e-16
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		3e-15
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		3e-14
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		9e-14
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		1e-09
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		7e-09
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		7e-09
3lns_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		1e-08
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		1e-08
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		1e-08
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		3e-08
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		1e-07

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score =  239 bits (609), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 128/240 (53%), Positives = 161/240 (67%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYYCFVC--AGSRTYVQE 424
           I  AA  SNLKRVSLELGGKSP ++ ADAD+D A        +Y+   C  A SR +V+E
Sbjct: 254 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEE 313
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD F             G+P    V QGPQ+D E + K+L+ I+SG ++G KLE GG 
Sbjct: 314 SIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 373
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
             G+KGYFI+PTVFS+VTDD +IA+EEIFGPVQ I+KFK+LD+VI+RAN+T YGL++GI 
Sbjct: 374 PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIF 433
Query: 545 TTNIDTANTFAHAINAG-------SAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T +ID A T + A+ +G       S V  Q PFGGFK SG GRELG+    EYTE+KTVT
Sbjct: 434 TNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 493

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score =  239 bits (609), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 146/365 (40%), Positives = 207/365 (56%), Gaps = 48/365 (13%)
Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMS-APYW 59
           +LA K GPAL  G  V++KPAEQTPLTAL+VA+L ++AGFP GV++++PGYGP + A   
Sbjct: 175 LLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAIS 234
Query: 60  RKSCLSPLAYRSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAVMFTKVL 119
               +  +A+   T V + I +                     +++ G +   ++F    
Sbjct: 235 SHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRV-----------TLELGAKNPCIVFADA- 282
Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 179
             + S VE                 F    VF+N      IA  ++F  V+  I  + + 
Sbjct: 283 -DLDSAVE-----------------FAHQGVFTNQGQSC-IAASKLF--VEEAIYDEFVQ 321
Query: 180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAG-SVDAEMFTKVLNYIKSGVEQGGKL 238
             +ERA    +G             N     +N G  ++     K++  I+SG ++G KL
Sbjct: 322 RSVERAKKYVFG-------------NPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKL 368
Query: 239 EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 298
           E GG   G+KGYFI+PTVFSNVTDD +IA+EEIFGPVQ I+KFK+LDEVI+RAN+T YGL
Sbjct: 369 ECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGL 428
Query: 299 ASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTE 358
            +G+ T ++D A T + A+ AG+VW+NCY A   Q+P GGFK SG GRE+G+  + EYTE
Sbjct: 429 VAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTE 488
Query: 359 LKTVT 363
           +KTVT
Sbjct: 489 VKTVT 493

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score =  223 bits (569), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 117/240 (48%), Positives = 154/240 (64%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF----------VCAGSRTYVQE 424
           I  AAA SNLKRV+LELG K+P ++ ADAD+D A  +              A S+ +V+E
Sbjct: 254 IQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEE 313
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IYD F             G+P    V  GPQ++     K++  I+SG ++G KLE GG 
Sbjct: 314 AIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGG 373
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
             G+KGYFI+PTVFSNVTDD +IA+EEIFGPVQ I+KFK+LDEVI+RAN+T YGL +G+ 
Sbjct: 374 PWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVF 433
Query: 545 TTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T ++D A T + A+ AG+       A   Q+P GGFK SG GRE+G+  + EYTE+KTVT
Sbjct: 434 TKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTVT 493

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score =  238 bits (606), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 124/242 (51%), Positives = 158/242 (65%), Gaps = 17/242 (7%)
Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYV 422
           H I  AA  SNLKRV+LE+GGKSP +I +DAD+D     A++  F       CAGSRT+V
Sbjct: 250 HLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFV 309
Query: 423 QEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           QEDIY  F             G+PFD   +QGPQVD   F KVL YIKSG E+G KL  G
Sbjct: 310 QEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCG 369
Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           G    D+GYFI+PTVF ++ D   IA+EEIFGPV  I+KFK+++EV+ RAN++KYGLA+ 
Sbjct: 370 GGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAA 429
Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T ++D AN  + A+ AG+  V        Q+PFGG+K SG GRELG+  L  YTE+KT
Sbjct: 430 VFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKT 489
Query: 596 VT 597
           VT
Sbjct: 490 VT 491

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score =  236 bits (603), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 124/240 (51%), Positives = 162/240 (67%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYYCFVC--AGSRTYVQE 424
           I  AA  SNLKRV+LELGGKSP +I ADAD+D A        ++    C  AGSR +V+E
Sbjct: 252 IQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEE 311
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            IY+ F             G PFD + +QGPQ+D + + K+L  I+SGV +G KLE GGK
Sbjct: 312 SIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGK 371
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
             G KG+FIEPTVFSNVTDD +IA+EEIFGPVQ I++FKT+DEVIERAN++ +GL + + 
Sbjct: 372 GLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVF 431
Query: 545 TTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T +I+ A   + A+ AG+       A+  Q+PFGGFK SG GRE+G+  L EY+E+KTVT
Sbjct: 432 TNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVT 491

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  236 bits (602), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 122/240 (50%), Positives = 157/240 (65%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           DIYD F             G+PFD   +QGPQVD   F K+L YI +G ++G KL  GG 
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA+ + 
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T ++D AN  + A+ AG+  V        Q+PFGG+K SG GRELG+  L  YTE+KTVT
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  236 bits (601), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 122/240 (50%), Positives = 157/240 (65%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           DIYD F             G+PFD   +QGPQVD   F K+L YI +G ++G KL  GG 
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA+ + 
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T ++D AN  + A+ AG+  V        Q+PFGG+K SG GRELG+  L  YTE+KTVT
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score =  236 bits (601), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 122/240 (50%), Positives = 157/240 (65%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+VQE
Sbjct: 247 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 306
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           DIYD F             G+PFD   +QGPQVD   F K+L YI +G ++G KL  GG 
Sbjct: 307 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA+ + 
Sbjct: 367 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 426
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T ++D AN  + A+ AG+  V        Q+PFGG+K SG GRELG+  L  YTE+KTVT
Sbjct: 427 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 486

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  236 bits (601), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 122/240 (50%), Positives = 157/240 (65%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQE 312
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           DIYD F             G+PFD   +QGPQVD   F K+L YI +G ++G KL  GG 
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA+ + 
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T ++D AN  + A+ AG+  V        Q+PFGG+K SG GRELG+  L  YTE+KTVT
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score =  236 bits (601), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 122/240 (50%), Positives = 157/240 (65%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFV------CAGSRTYVQE 424
           I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           DIYD F             G+PFD   +QGPQVD   F K+L YI +G ++G KL  GG 
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA+ + 
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T ++D AN  + A+ AG+  V        Q+PFGG+K SG GRELG+  L  YTE+KTVT
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  234 bits (596), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/240 (50%), Positives = 157/240 (65%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           DIYD F             G+PFD   +QGPQVD   F K+L YI +G ++G KL  GG 
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA+ + 
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T ++D AN  + A+ AG+  V        Q+PFGG+K SG G+ELG+  L  YTE+KTVT
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGQELGEYGLQAYTEVKTVT 492

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score =  231 bits (588), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 120/240 (50%), Positives = 156/240 (65%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           I  AA +SNLKRV+L+LGGKSP +I +DAD+D     A++  F        AGSRT+VQE
Sbjct: 253 IQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQE 312
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           DIYD F             G+PFD   +QGPQVD   F K+L YI +G ++G KL  GG 
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA+ + 
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           T ++D AN  + A+ AG+  V        Q+PFGG+K SG GRELG+  L  YTE+KTVT
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score =  225 bits (573), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 116/233 (49%), Positives = 150/233 (64%), Gaps = 17/233 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
           I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           DIYD F             G+PFD   +QGPQVD   F K+L YI +G ++G KL  GG 
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA+ + 
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEY 590
           T ++D AN  + A+ AG+  V        Q+PFGG+K SG GRELG+  L  Y
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score =  224 bits (572), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 116/233 (49%), Positives = 150/233 (64%), Gaps = 17/233 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFV------CAGSRTYVQE 424
           I  AA +SNLKRV+LELGGKSP +I +DAD+D     A++  F       CAGSRT+VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           DIYD F             G+PFD   +QGPQVD   F K+L YI +G ++G KL  GG 
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA+ + 
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEY 590
           T ++D AN  + A+ AG+  V        Q+PFGG+K SG GRELG+  L  Y
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 25/290 (8%)
Query: 328 QAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRV 387
           +A VP   F     +G GRE+G+  L E+  ++ ++ +   S T   +MA+A++S+LK V
Sbjct: 194 EAGVPDGVFNVL--TGSGREVGQW-LTEHPLIEKISFTGGTS-TGKKVMASASSSSLKEV 249
Query: 388 SLELGGKSPLVICADADVD-------MAYYYCF--VCA-GSRTYVQEDIYDTFXXXXXXX 437
           ++ELGGKSPL+I  DAD+D       MA ++    VC  G+R ++       F       
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLER 309
Query: 438 XXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD----KGYFI 493
                 GDP D++   GP V       VL YI+SG  Q  +L  GG+R  D    KG ++
Sbjct: 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 369
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
            PTVF++  DD  I REEIFGPV +I+ +   DE I RANDT+YGLA+G+VT ++  A+ 
Sbjct: 370 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429
Query: 554 FAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
             H + AG   +        + P GG+K+SG+GRE G   L  YT +K+V
Sbjct: 430 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 25/290 (8%)
Query: 328 QAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRV 387
           +A VP   F     +G GRE+G+  L E+  ++ ++ +   S T   +MA+A++S+LK V
Sbjct: 193 EAGVPDGVFNVL--TGSGREVGQW-LTEHPLIEKISFTGGTS-TGKKVMASASSSSLKEV 248
Query: 388 SLELGGKSPLVICADADVD-------MAYYYCF--VCA-GSRTYVQEDIYDTFXXXXXXX 437
           ++ELGGKSPL+I  DAD+D       MA ++    VC  G+R ++       F       
Sbjct: 249 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLER 308
Query: 438 XXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD----KGYFI 493
                 GDP D++   GP V       VL YI+SG  Q  +L  GG+R  D    KG ++
Sbjct: 309 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 368
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
            PTVF++  DD  I REEIFGPV +I+ +   DE I RANDT+YGLA+G+VT ++  A+ 
Sbjct: 369 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 428
Query: 554 FAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
             H + AG   +        + P GG+K+SG+GRE G   L  YT +K+V
Sbjct: 429 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score =  175 bits (444), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 159/290 (54%), Gaps = 25/290 (8%)
Query: 328 QAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRV 387
           +A VP   F     +G GRE+G+  L E+  ++ ++ +   S T   +MA+A++S+LK V
Sbjct: 194 EAGVPDGVFNVL--TGSGREVGQW-LTEHPLIEKISFTGGTS-TGKKVMASASSSSLKEV 249
Query: 388 SLELGGKSPLVICADADVD-------MAYYYC---FVCAGSRTYVQEDIYDTFXXXXXXX 437
           ++ELGGKSPL+I  DAD+D       MA ++        G+R ++       F       
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLER 309
Query: 438 XXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD----KGYFI 493
                 GDP D++   GP V       VL YI+SG  Q  +L  GG+R  D    KG ++
Sbjct: 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 369
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
            PTVF++  DD  I REEIFGPV +I+ +   DE I RANDT+YGLA+G+VT ++  A+ 
Sbjct: 370 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429
Query: 554 FAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
             H + AG   +        + P GG+K+SG+GRE G   L  YT +K+V
Sbjct: 430 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  175 bits (443), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 159/290 (54%), Gaps = 25/290 (8%)
Query: 328 QAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRV 387
           +A VP   F     +G GRE+G+  L E+  ++ ++ +   S T   +MA+A++S+LK V
Sbjct: 194 EAGVPDGVFNVL--TGSGREVGQW-LTEHPLIEKISFTGGTS-TGKKVMASASSSSLKEV 249
Query: 388 SLELGGKSPLVICADADVD-------MAYYYC---FVCAGSRTYVQEDIYDTFXXXXXXX 437
           ++ELGGKSPL+I  DAD+D       MA ++        G+R ++       F       
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAKVLER 309
Query: 438 XXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD----KGYFI 493
                 GDP D++   GP V       VL YI+SG  Q  +L  GG+R  D    KG ++
Sbjct: 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 369
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
            PTVF++  DD  I REEIFGPV +I+ +   DE I RANDT+YGLA+G+VT ++  A+ 
Sbjct: 370 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 429
Query: 554 FAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
             H + AG   +        + P GG+K+SG+GRE G   L  YT +K+V
Sbjct: 430 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  175 bits (443), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 138/242 (57%), Gaps = 19/242 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCF------VCAGSRTYVQE 424
           IM + A SN+K+VSLELGGKSPL+I AD D    V M     F        A  R +V+E
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I++ F             G+P ++    GPQ       K++ Y + GV++G  L  GG 
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASG 542
           +    G+F +PTVF++V D   IA+EE FGP+  I +F    +D V+ RAN T++GLASG
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 543 IVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGIGRELGKAALDEYTELKT 595
           + T +I+ A   +  + AG+  +         APFGGFK+SG G++LG+AAL+EY  +KT
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 596 VT 597
           VT
Sbjct: 513 VT 514

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score =  175 bits (443), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 138/242 (57%), Gaps = 19/242 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCF------VCAGSRTYVQE 424
           IM + A SN+K+VSLELGGKSPL+I AD D    V M     F        A  R +V+E
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEE 332
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I++ F             G+P ++    GPQ       K++ Y + GV++G  L  GG 
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASG 542
           +    G+F +PTVF++V D   IA+EE FGP+  I +F    +D V+ RAN T++GLASG
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 543 IVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGIGRELGKAALDEYTELKT 595
           + T +I+ A   +  + AG+  +         APFGGFK+SG G++LG+AAL+EY  +KT
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 596 VT 597
           VT
Sbjct: 513 VT 514

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score =  174 bits (442), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 138/242 (57%), Gaps = 19/242 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCFV------CAGSRTYVQE 424
           IM + A SN+K+VSLELGGKSPL+I AD D    V M     F        A  R +V+E
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEE 332
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I++ F             G+P ++    GPQ       K++ Y + GV++G  L  GG 
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASG 542
           +    G+F +PTVF++V D   IA+EE FGP+  I +F    +D V+ RAN T++GLASG
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 543 IVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGIGRELGKAALDEYTELKT 595
           + T +I+ A   +  + AG+  +         APFGGFK+SG G++LG+AAL+EY  +KT
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 596 VT 597
           VT
Sbjct: 513 VT 514

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score =  174 bits (441), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/290 (37%), Positives = 160/290 (55%), Gaps = 25/290 (8%)
Query: 328 QAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRV 387
           +A VP   F     +G GRE+G+  L E+  ++ ++ +   S T   +MA+A++S+LK V
Sbjct: 193 EAGVPDGVFNVL--TGSGREVGQW-LTEHPLIEKISFTGGTS-TGKKVMASASSSSLKEV 248
Query: 388 SLELGGKSPLVICADADVD-------MAYYYCF--VCA-GSRTYVQEDIYDTFXXXXXXX 437
           ++ LGGKSPL+I  DAD+D       MA ++    VC  G+R ++       F       
Sbjct: 249 TMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLER 308
Query: 438 XXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD----KGYFI 493
                 GDP D++   GP V       VL YI+SG  Q  +L  GG+R  D    KG ++
Sbjct: 309 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYV 368
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
            PTVF++  DD  I REEIFGPV +I+ +   DE I RANDT+YGLA+G+VT ++  A+ 
Sbjct: 369 APTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHR 428
Query: 554 FAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
             H + AG   +        + P GG+K+SG+GRE G   L  YT +K+V
Sbjct: 429 AIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  174 bits (441), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 138/242 (57%), Gaps = 19/242 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCF------VCAGSRTYVQE 424
           IM + A SN+K+VSL+LGGKSPL+I AD D    V M     F        A  R +V+E
Sbjct: 273 IMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I++ F             G+P ++    GPQ       K++ Y + GV++G  L  GG 
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASG 542
           +    G+F +PTVF++V D   IA+EE FGP+  I +F    +D V+ RAN T++GLASG
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 543 IVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGIGRELGKAALDEYTELKT 595
           + T +I+ A   +  + AG+  +         APFGGFK+SG G++LG+AAL+EY  +KT
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 596 VT 597
           VT
Sbjct: 513 VT 514

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  172 bits (437), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 137/242 (56%), Gaps = 19/242 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCF------VCAGSRTYVQE 424
           IM + A SN+K+VSL LGGKSPL+I AD D    V M     F        A  R +V+E
Sbjct: 273 IMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I++ F             G+P ++    GPQ       K++ Y + GV++G  L  GG 
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASG 542
           +    G+F +PTVF++V D   IA+EE FGP+  I +F    +D V+ RAN T++GLASG
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 543 IVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGIGRELGKAALDEYTELKT 595
           + T +I+ A   +  + AG+  +         APFGGFK+SG G++LG+AAL+EY  +KT
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 596 VT 597
           VT
Sbjct: 513 VT 514

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  172 bits (436), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 137/242 (56%), Gaps = 19/242 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCF------VCAGSRTYVQE 424
           IM + A SN+K+VSL LGGKSPL+I AD D    V M     F        A  R +V+E
Sbjct: 273 IMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEE 332
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I++ F             G+P ++    GPQ       K++ Y + GV++G  L  GG 
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASG 542
           +    G+F +PTVF++V D   IA+EE FGP+  I +F    +D V+ RAN T++GLASG
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 543 IVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGIGRELGKAALDEYTELKT 595
           + T +I+ A   +  + AG+  +         APFGGFK+SG G++LG+AAL+EY  +KT
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 596 VT 597
           VT
Sbjct: 513 VT 514

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  169 bits (429), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 169/380 (44%), Gaps = 75/380 (19%)
Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M  WK  PALAAGC  +LKP+E   +T L +A + ++ G P GV++++ G GP +     
Sbjct: 184 MATWKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAG---- 239
Query: 61  KSCLSPLAYRSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAVMFTKVLN 120
               +PL+                                       P VD V FT    
Sbjct: 240 ----APLSAH-------------------------------------PDVDKVAFT---- 254
Query: 121 YIKSGVEQGGKLEAGGKRKGDKGYFIEPT-----------VFSNVTDDFKIAREEIFGPV 169
                    G  E G K        ++P            VF +V  D K     +FG  
Sbjct: 255 ---------GSFETGKKIMASAAPMVKPVTLELGGKSPIVVFDDVDID-KAVEWTLFGCF 304
Query: 170 QT--IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAE-MFTKVLN 226
            T   I   T   +I      K+         NI  ++        G V +E  + K+  
Sbjct: 305 WTNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKK 364
Query: 227 YIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 284
           +I +   QG  +  GG R    +KG+FIEPT+ +++T   +I REE+FGPV  + +F T 
Sbjct: 365 FISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTE 424
Query: 285 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI 344
           DE IE ANDT+YGLA  +++ + +     +  I+AG +W+NC Q    QAP+GG K SG 
Sbjct: 425 DEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGF 484
Query: 345 GRELGKAALDEYTELKTVTE 364
           GRELG+  +D Y  +K VTE
Sbjct: 485 GRELGEGGIDNYLSVKQVTE 504

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 134/249 (53%), Gaps = 19/249 (7%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYY----CF-----VC-AGS 418
           S+ +   + A+AA  +K V+LELGGKSP+V+  D D+D A  +    CF     +C A S
Sbjct: 256 SFETGKKIMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATS 315
Query: 419 RTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
           R  +   I   F              DP ++  + GP V    + K+  +I +   QG  
Sbjct: 316 RLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGAT 375
Query: 479 LEAGGKRKG--DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
           +  GG R    +KG+FIEPT+ +++T   +I REE+FGPV  + +F T DE IE ANDT+
Sbjct: 376 ILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQ 435
Query: 537 YGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDE 589
           YGLA  +++ + +     +  I+AG   V        QAP+GG K SG GRELG+  +D 
Sbjct: 436 YGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDN 495
Query: 590 YTELKTVTE 598
           Y  +K VTE
Sbjct: 496 YLSVKQVTE 504

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score =  169 bits (427), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 98/241 (40%), Positives = 137/241 (56%), Gaps = 20/241 (8%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVCA-GSRTYVQED 425
           +AAAAA +LK V++ELGGKSP+++  DAD++ A         Y    VC+ G+R +VQ+ 
Sbjct: 244 VAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKK 303
Query: 426 IYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG-- 483
               F             GDP D +   GP V      KVL+YI+ G  +G  L  GG  
Sbjct: 304 AKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGI 363
Query: 484 -KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
                 +G +++PTVF++VTDD  IAREEIFGPV  ++ F   DEV+ RAN T++GLA G
Sbjct: 364 PNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGG 423
Query: 543 IVTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIGRELGKAALDEYTELKT 595
           + T ++  A+     + AG+  +        + PFGG K+SG GRE   AAL+ Y+ELKT
Sbjct: 424 VFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKT 483
Query: 596 V 596
           V
Sbjct: 484 V 484

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score =  165 bits (418), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 135/242 (55%), Gaps = 19/242 (7%)
Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQ 423
           S +   AA + K+VSLELGGKSP ++  D D+  A              VC AG+R  V 
Sbjct: 232 SKIXEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVP 291
Query: 424 EDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
             I D F             G+P +   Q GP +  + F +V NYI  G+E+G +L  GG
Sbjct: 292 NKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGG 351
Query: 484 KRKGD---KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
             K +   KGYF  PT+F NV +   IA+EEIFGPV ++I +  LDE I+ ANDTKYGLA
Sbjct: 352 PGKPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLA 411
Query: 541 SGIVTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGIGRELGKAALDEYTELK 594
             ++  + +T +  A +I AG+  +      P  PFGG+K+SG+GRE G   ++E+ E+K
Sbjct: 412 GYVIGKDKETLHKVARSIEAGTVEINEAGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVK 471
Query: 595 TV 596
           ++
Sbjct: 472 SI 473

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score =  162 bits (409), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/275 (37%), Positives = 145/275 (52%), Gaps = 22/275 (8%)
Query: 342 SGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA 401
           +G+G E G A+L  + ++  ++ +   S T   IM  AA   +K VSLELGGKSP+V+  
Sbjct: 215 TGLGHEAG-ASLASHPDVDKISFTG-SSATGSKIMTTAA-QLVKPVSLELGGKSPIVVFE 271
Query: 402 DADVDMAYYY----CF-----VC-AGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSV 451
           D D+D    +    CF     +C A SR  V E I   F              DP ++  
Sbjct: 272 DVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPLEEGC 331
Query: 452 QQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAR 509
           + GP V    + KVLN I S   +G  +  GG+R     KGYF+EPT+ ++VT   +I R
Sbjct: 332 RLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWR 391
Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP--- 566
           EE+FGPV  +  F T +E I  ANDT YGL S +++ +++     + A+ AG   +    
Sbjct: 392 EEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIVWINCAQ 451
Query: 567 ----QAPFGGFKESGIGRELGKAALDEYTELKTVT 597
               QAP+GG K SG GRELG+  L+ Y  +K VT
Sbjct: 452 PSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVT 486

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score =  159 bits (402), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/276 (36%), Positives = 145/276 (52%), Gaps = 22/276 (7%)
Query: 342 SGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA 401
           +G+G E G A L  + ++  V  +   S T   IM AAA   +K VSLELGGKSPLV+  
Sbjct: 215 TGLGPEAG-APLATHPDVDKVAFTG-SSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFE 271
Query: 402 DADVD----MAYYYCF-----VC-AGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSV 451
           D D+D     A + CF     +C A SR  + E I   F              DP ++  
Sbjct: 272 DVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGC 331
Query: 452 QQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAR 509
           + GP V    + K+L ++ +   +G  +  GG R     KG+FIEPT+ ++VT + +I R
Sbjct: 332 RLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWR 391
Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---- 565
           EE+FGPV  +  F T +E I+ ANDT YGL + +++ +++       A  AG   V    
Sbjct: 392 EEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQ 451
Query: 566 ---PQAPFGGFKESGIGRELGKAALDEYTELKTVTE 598
               QAP+GG K SG GRELG+  LD Y  +K VT+
Sbjct: 452 PCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  157 bits (396), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 165/376 (43%), Gaps = 67/376 (17%)
Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M  WK  PALAAGC  +LKP+E   +T L    +  + G P GV+++L G GP +     
Sbjct: 164 MATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAG---- 219
Query: 61  KSCLSPLAYRSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAVMFT---- 116
               +PL                                        P VD + FT    
Sbjct: 220 ----APLVSH-------------------------------------PDVDKIAFTGSSA 238
Query: 117 ---KVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 173
              KV+      V+    LE GGK          P V     D  K+    IFG   T  
Sbjct: 239 TGSKVMASAAQLVKPV-TLELGGK---------SPIVVFEDVDIDKVVEWTIFGCFWTNG 288
Query: 174 KFKTLDEVIERANDTKYGLASGIV--TTNIDTANTFAHAINAGSVDAE-MFTKVLNYIKS 230
           +  +    +             +V  T NI  ++ F      G V ++  + K++ +I +
Sbjct: 289 QICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFIST 348
Query: 231 GVEQGGKLEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVI 288
              +G  +  GG R     KGY+IEPT+ ++++   +I +EE+FGPV  +  F + DE I
Sbjct: 349 AKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAI 408
Query: 289 ERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGREL 348
             ANDT+YGLA+ + + +++       A+  G+VW+NC Q    QAP+GG K SG GREL
Sbjct: 409 ALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGREL 468
Query: 349 GKAALDEYTELKTVTE 364
           G+  +  Y  +K VT+
Sbjct: 469 GEWGIQNYLNIKQVTQ 484

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  152 bits (383), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 132/249 (53%), Gaps = 19/249 (7%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYY----CF-----VC-AGS 418
           S  + S + A+AA  +K V+LELGGKSP+V+  D D+D    +    CF     +C A S
Sbjct: 236 SSATGSKVMASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATS 295
Query: 419 RTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
           R  V E I   F              DPF++  + GP +    + K++ +I +   +G  
Sbjct: 296 RLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGAT 355
Query: 479 LEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
           +  GG R     KGY+IEPT+ ++++   +I +EE+FGPV  +  F + DE I  ANDT+
Sbjct: 356 ILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTE 415
Query: 537 YGLASGIVTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIGRELGKAALDE 589
           YGLA+ + + +++       A+  G+  V        QAP+GG K SG GRELG+  +  
Sbjct: 416 YGLAAAVFSNDLERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGRELGEWGIQN 475
Query: 590 YTELKTVTE 598
           Y  +K VT+
Sbjct: 476 YLNIKQVTQ 484

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  153 bits (387), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 146/290 (50%), Gaps = 36/290 (12%)
Query: 344 IGRELG--KAALDEYTELKTVTESPLRSY-------------TSHSIMAAAAASNLKRVS 388
           I RE+G    AL+  T L      PL S+             T   IM AAA   +K VS
Sbjct: 213 ICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQL-VKPVS 271
Query: 389 LELGGKSPLVICADAD-VDMAYYYCF---------VC-AGSRTYVQEDIYDTFXXXXXXX 437
           LELGGKSP+V+  D D +D+A  +           VC A SR  VQE+I   F       
Sbjct: 272 LELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKW 331
Query: 438 XXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD--KGYFIEP 495
                  DP ++  + GP V A  + KVL +I +   +G  +  GG+R     KGY+++P
Sbjct: 332 TKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQP 391
Query: 496 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 555
           T+ ++V    +I +EE+FGPV  +  FKT ++ IE ANDTKYGL + +++ ++     F 
Sbjct: 392 TIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFT 451
Query: 556 HA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 598
            A       IN       + P+GG K SG GR+LGK  L+ +  +K VTE
Sbjct: 452 KAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVTE 501

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score =  152 bits (385), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 165/366 (45%), Gaps = 68/366 (18%)
Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLA 68
           A+ +GC V+LKP+E T  T++ +A L ++AG PDGV +V+ GYG                
Sbjct: 185 AIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYG---------------- 228
Query: 69  YRSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAVMFTKVLNY-IKSGVE 127
                                        DP  + + + P VD V FT  +    K G  
Sbjct: 229 -----------------------------DPAGQVLAEDPNVDXVAFTGSVRVGTKLGEI 259
Query: 128 QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL-------DE 180
               ++  G   G KG  I             IA        Q  I    L       D 
Sbjct: 260 AARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDA 319
Query: 181 VIERANDTKYGLASGIVT---TNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
           + ER  D    +A G      T I    + AHA            KV +Y+ +G+  G +
Sbjct: 320 LXERLLDISRKVAFGDPLNERTKIGAXISEAHA-----------EKVHSYVTAGITSGAE 368
Query: 238 LEAGGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 296
           L  GG+R G + G +  PTVF+ VT D  IAREEIFGPV + + FKT DE +  AN T++
Sbjct: 369 LLLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEF 428
Query: 297 GLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEY 356
           GL++ + +TN++TA      I AG  WIN      P+ P GG+K+SG+GRELG+   DEY
Sbjct: 429 GLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEY 488
Query: 357 TELKTV 362
           ++ K V
Sbjct: 489 SQFKGV 494

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/235 (40%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 380 AASNLKRVSLELGGKSPLVICADADVDM--------AYYYCFVC--AGSRTYVQEDIYDT 429
           AA  +KRV LELGGK P ++ ADAD+D          Y+    C  +GSR  VQE I D 
Sbjct: 260 AARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDA 319
Query: 430 FXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-D 488
                         GDP ++  + G  +      KV +Y+ +G+  G +L  GG+R G +
Sbjct: 320 LXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGRE 379
Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI 548
            G +  PTVF+ VT D  IAREEIFGPV + + FKT DE +  AN T++GL++ + +TN+
Sbjct: 380 AGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNL 439
Query: 549 DTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
           +TA      I AG   +       P+ P GG+K+SG+GRELG+   DEY++ K V
Sbjct: 440 ETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score =  152 bits (384), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 127/240 (52%), Gaps = 23/240 (9%)
Query: 380 AASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VCA-GSRTYVQEDIYDT 429
           +A  +K V+LELGGKSPL+I  D +++ A              VC  G+R +VQ +I   
Sbjct: 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQ 312
Query: 430 FXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR---- 485
           F             GDP     + G  +      KVL ++    ++G ++  GG+     
Sbjct: 313 FLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPS 372
Query: 486 --KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
             K   GYF+ P V  N  DD    +EEIFGPV +++ F T +EV++RAN+T +GLASG+
Sbjct: 373 DPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGV 432
Query: 544 VTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIGRELGKAALDEYTELKTV 596
            T +I  A+  A  + AG+  +        + PFGG+K SG GRE G+A +D Y++LKTV
Sbjct: 433 FTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTV 492

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score =  152 bits (384), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 137/253 (54%), Gaps = 27/253 (10%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAY------YYCF----VCAGSRTYVQE 424
           I+   AA +LKR+S ELGGKSP ++ ADAD++ A        + F      A SR  V+E
Sbjct: 256 IVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEE 315
Query: 425 DIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I++ F             G P D   + GP +  E   +VL Y+++G  +G +L  GG+
Sbjct: 316 KIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGE 375
Query: 485 R-----KGD---KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
           R     +G+   +G ++ PTVF    +  KIA+EEIFGPV   I FK  +E + +ANDTK
Sbjct: 376 RAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTK 434
Query: 537 YGLASGIVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGIGRELGKAALDE 589
           YGLA+ + T +++ A+  A  + AG   +          PFGG K SG  RE G  ALD 
Sbjct: 435 YGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDF 494
Query: 590 YTELKTVTESPLR 602
           YT+LKT+   PLR
Sbjct: 495 YTDLKTIA-LPLR 506

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 145/290 (50%), Gaps = 36/290 (12%)
Query: 344 IGRELG--KAALDEYTELKTVTESPLRSY-------------TSHSIMAAAAASNLKRVS 388
           I RE+G    AL+  T L      PL S+             T   IM AAA   +K VS
Sbjct: 213 ICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAA-QLVKPVS 271
Query: 389 LELGGKSPLVICADAD-VDMAYYYCF---------VC-AGSRTYVQEDIYDTFXXXXXXX 437
           L LGGKSP+V+  D D +D+A  +           VC A SR  VQE+I   F       
Sbjct: 272 LALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKW 331
Query: 438 XXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD--KGYFIEP 495
                  DP ++  + GP V A  + KVL +I +   +G  +  GG+R     KGY+++P
Sbjct: 332 TKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQP 391
Query: 496 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 555
           T+ ++V    +I +EE+FGPV  +  FKT ++ IE ANDTKYGL + +++ ++     F 
Sbjct: 392 TIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFT 451
Query: 556 HA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 598
            A       IN       + P+GG K SG GR+LGK  L+ +  +K VTE
Sbjct: 452 KAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVTE 501

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score =  149 bits (376), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 21/232 (9%)
Query: 380 AASNLKRVSLELGGKSPLVICADADVDMA--------YYYC-FVC-AGSRTYVQEDIYDT 429
           AA+N+  ++LELGGK+P +I  DAD ++A        Y++   VC AGSR  VQ  I D 
Sbjct: 269 AANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328
Query: 430 FXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KG 487
           F             G+ FD   + GP +  E   K+ +Y+     +G  +  GGKR  + 
Sbjct: 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRD 388
Query: 488 D--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
           D   G F EPTV +N     +I +EE+FGPV T+  F+T  E I+ AND+ YGLA  + +
Sbjct: 389 DLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFS 448
Query: 546 TNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEY 590
            +I  A   A+ +  G+  +        QAP+GG+K+SGIGRELGK  L+EY
Sbjct: 449 KDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEY 500

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score =  143 bits (361), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 122/235 (51%), Gaps = 18/235 (7%)
Query: 380 AASNLKRVSLELGGKSPLVICADAD----VDMAYYYCFVCAG------SRTYVQEDIYDT 429
           AA  LK  +LELGGKS  +I  D D    + M  +   + AG      +R       YD 
Sbjct: 244 AAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303
Query: 430 FXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-- 487
                         G P D + Q GP +  +  T+V  YI  G+E+G +L  GG R    
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGL 363
Query: 488 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN 547
           D G+FI+PTVF++V +   IA+EEIFGPV  II + T ++ I  AND+ YGLA  + TT+
Sbjct: 364 DNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTD 423
Query: 548 IDTANTFAHAINAGS------AVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
           +      +  I  G+      A  P +PFGG+K SGIGRE G   ++ +T+ K+V
Sbjct: 424 VPKGIKISQQIRTGTYGINWYAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSV 478

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  138 bits (347), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 120/232 (51%), Gaps = 19/232 (8%)
Query: 381 ASNLKRVSLELGGKSPLVICADADVDMAYYYCF-----------VCAGSRTYVQEDIYDT 429
           A ++K+VSLELGG +P ++  DAD+D A                VCA +R YVQ+ +YD 
Sbjct: 245 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA-NRLYVQDGVYDR 303
Query: 430 FXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 489
           F             GD  D  V  GP +D +   KV  +I   +E+G ++  GGK     
Sbjct: 304 FAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERG 363
Query: 490 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNID 549
           G F +PT+  +V  + K+++EE FGP+  + +FK   +VI +ANDT++GLA+     ++ 
Sbjct: 364 GNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLS 423
Query: 550 TANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
                  A       IN G      APFGG K SG+GRE  K  +++Y E+K
Sbjct: 424 RVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 475

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 120/232 (51%), Gaps = 19/232 (8%)
Query: 381 ASNLKRVSLELGGKSPLVICADADVDMAYYYCF-----------VCAGSRTYVQEDIYDT 429
           A ++K+VSLELGG +P ++  DAD+D A                VCA +R YVQ+ +YD 
Sbjct: 245 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA-NRLYVQDGVYDR 303
Query: 430 FXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 489
           F             GD  D  V  GP +D +   KV  +I   +E+G ++  GGK     
Sbjct: 304 FAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERG 363
Query: 490 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNID 549
           G F +PT+  +V  + K+++EE FGP+  + +FK   +VI +ANDT++GLA+     ++ 
Sbjct: 364 GNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLS 423
Query: 550 TANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
                  A       IN G      APFGG K SG+GRE  K  +++Y E+K
Sbjct: 424 RVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 475

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 123/237 (51%), Gaps = 21/237 (8%)
Query: 382 SNLKRVSLELGGKSPLVICADADVDMAYYYCF----------VCAGSRTYVQEDIYDTFX 431
           ++LK+V  E+GGK  +V+  D D+++A    F            AGSR  V E +YD   
Sbjct: 279 THLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVL 338
Query: 432 XXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
                       G+P    V  GP +D   F K+++YI+ G E+G +L +GGK    KGY
Sbjct: 339 KRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEG-RLVSGGKGDDSKGY 397
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA 551
           FIEPT+F+++    ++ +EEIFGPV    K  + DE +E AN+T+YGL   ++T N D  
Sbjct: 398 FIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHI 457
Query: 552 NTFAHAINAGS---------AVVPQAPFGGFKESGIGRELGKAA-LDEYTELKTVTE 598
           N      + G+         A+V   PFGGFK SG   + G    L  + + KT++E
Sbjct: 458 NRAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTISE 514

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 123/246 (50%), Gaps = 18/246 (7%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGS 418
           S ++   + A AA N+ +V LELGGK+P ++  DAD+++A              VC    
Sbjct: 230 SVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAE 289
Query: 419 RTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKS-VQQGPQVDAEMFTKVLNYIKSGVEQGG 477
           R YVQ+ IYD F             G+P +++ +  GP ++A    +V   +   VE+G 
Sbjct: 290 RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGA 349
Query: 478 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
           ++  GGK    KGY+  PT+  +V  +  I  EE FGPV  ++ F TL+E I  AND+ Y
Sbjct: 350 RVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDY 409
Query: 538 GLASGIVTTNIDTANTFAHAINAGSAVVPQAPF-------GGFKESGIGRELGKAALDEY 590
           GL S I T N++ A      +  G   + +  F        G+++SGIG   GK  L EY
Sbjct: 410 GLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 469
Query: 591 TELKTV 596
            + + V
Sbjct: 470 LQTQVV 475

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 135/277 (48%), Gaps = 26/277 (9%)
Query: 342 SGIGRELGKAALDEYTELKTVTESPLRSYTS-HSIMAAAAASNLKRVSLELGGKSPLVI- 399
           +G  RE+G     E T   TV +      T    ++ A  A  +KR+SLELGG +P ++ 
Sbjct: 232 TGKAREIGA----ELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVF 287
Query: 400 -----CADADVDMAYYY-----CFVCAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDK 449
                 A  D  M   Y       VCA +R YVQ  +YD F             G+  + 
Sbjct: 288 DDADLDAAVDGAMVSKYRNAGQTCVCA-NRIYVQRGVYDKFAEKLAAKVKELKVGNGTEP 346
Query: 450 SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR 509
            V  GP ++ +  TKV  +I+  V +G KL  GGK  G  G F EP + + VT D  +A+
Sbjct: 347 GVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GLFFEPGILTGVTSDMLVAK 404
Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI-------NAGS 562
           EE FGP+  +  F T +EVI +ANDT +GLA+   T N   A   + A+       N G 
Sbjct: 405 EETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGL 464
Query: 563 AVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES 599
                APFGG K+SG+GRE  K  ++EY E K +  +
Sbjct: 465 ISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 123/246 (50%), Gaps = 18/246 (7%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGS 418
           S ++   + A AA N+ +V LELGGK+P ++  DAD+++A              VC    
Sbjct: 230 SVSAGEKIMATAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAE 289
Query: 419 RTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKS-VQQGPQVDAEMFTKVLNYIKSGVEQGG 477
           R YVQ+ IYD F             G+P +++ +  GP ++A    +V   +   VE+G 
Sbjct: 290 RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGA 349
Query: 478 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
           ++  GGK    KGY+  PT+  +V  +  I  EE FGPV  ++ F TL++ I  AND+ Y
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409
Query: 538 GLASGIVTTNIDTANTFAHAINAGSAVVPQAPF-------GGFKESGIGRELGKAALDEY 590
           GL S I T N++ A      +  G   + +  F        G+++SGIG   GK  L EY
Sbjct: 410 GLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 469
Query: 591 TELKTV 596
            + + V
Sbjct: 470 LQTQVV 475

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 123/246 (50%), Gaps = 18/246 (7%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGS 418
           S ++   + A AA N+ +V LELGGK+P ++  DAD+++A              VC    
Sbjct: 230 SVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAE 289
Query: 419 RTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKS-VQQGPQVDAEMFTKVLNYIKSGVEQGG 477
           R YVQ+ IYD F             G+P +++ +  GP ++A    +V   +   VE+G 
Sbjct: 290 RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGA 349
Query: 478 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
           ++  GGK    KGY+  PT+  +V  +  I  EE FGPV  ++ F TL++ I  AND+ Y
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409
Query: 538 GLASGIVTTNIDTANTFAHAINAGSAVVPQAPF-------GGFKESGIGRELGKAALDEY 590
           GL S I T N++ A      +  G   + +  F        G+++SGIG   GK  L EY
Sbjct: 410 GLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 469
Query: 591 TELKTV 596
            + + V
Sbjct: 470 LQTQVV 475

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 141/280 (50%), Gaps = 26/280 (9%)
Query: 343 GIGRELGKAALDE-YTELKTVTESP---LRSYTSHSIMAAAAASNLKRVSLELGGKSPLV 398
           G G E+G   +D   T L T T S    +R Y   +++     ++LKRV +E+GGK  +V
Sbjct: 237 GSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQ-NHLKRVIVEMGGKDTVV 295
Query: 399 ICADADVDMAYYYCFVCA----------GSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFD 448
           +  DAD+D+A     V A          GSR  + +D+YD               GDP +
Sbjct: 296 VDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTN 355
Query: 449 KSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA 508
           +    GP +D + F K+++YI+ G ++G +L  GG+     G+FI+PT+ +++  +  I 
Sbjct: 356 RDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIM 414
Query: 509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN---IDTANTFAHA------IN 559
           +EEIFGPV    K    D  +E AN+T+YGL   ++T N   I+ A    H        N
Sbjct: 415 QEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRN 474
Query: 560 AGSAVVPQAPFGGFKESGIGRELGKAA-LDEYTELKTVTE 598
              A+V   PFGGFK SG   + G    L  + + KTV+E
Sbjct: 475 CTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSE 514

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 118/238 (49%), Gaps = 19/238 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF-----------VCAGSRTYVQ 423
           ++ A +A  +K+++LELGG +P ++  DAD+D A                VC  +R +V 
Sbjct: 242 LLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCT-NRFFVH 300
Query: 424 EDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           E +YD F             G   +     GP ++     KV ++I   + +G  L  GG
Sbjct: 301 ERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGG 360
Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           KR      F EPTV + V  D  +A+EE FGP+  + +F + +E++  ANDT++GLA+ +
Sbjct: 361 KRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYL 420
Query: 544 VTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
            + +I      A A       IN G      APFGG K+SG+GRE     +D+Y  +K
Sbjct: 421 YSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIK 478

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 120/236 (50%), Gaps = 18/236 (7%)
Query: 380 AASNLKRVSLELGGKSPLVICADADVD---MAYYYCFVCAG------SRTYVQEDIYDTF 430
           A++ LKRV LELGGK   +I ADAD+D       +CF  +G      +R  V++ IYD  
Sbjct: 260 ASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKA 319
Query: 431 XXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK---RKG 487
                        G         GP V  E + K+ + I+SG+++G  L  GG       
Sbjct: 320 IKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGM 379
Query: 488 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN 547
           ++GY++ PTVF++V    +I REEIFGPV +++ F T DE +  ANDT+YGL + I + +
Sbjct: 380 ERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQD 439
Query: 548 IDTANTFAHAINAGSAVV--PQAP----FGGFKESGIGRELGKAALDEYTELKTVT 597
                  A  + +G   V   + P    FGG K SG  RE G   + E+ + K ++
Sbjct: 440 RSKCRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 28/265 (10%)
Query: 360 KTVTESPLRSYTSHSIMAAA-------AASNLKRVSLELGGKSPLVICADADVDMA---- 408
           +T+ ESP+    + +    A       +A  +  V LELGGK+P+V+  DAD+D A    
Sbjct: 220 QTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDA 279
Query: 409 ----YYYC-FVCAG-SRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMF 462
               +  C  VC    R YV   +YD F             GDP D   Q GP+ +    
Sbjct: 280 LWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREI 339
Query: 463 TKVLNYIKSGVEQGGKLEAGGKRKGDKGY----FIEPTVFSNVTDDFKIAREEIFGPVQT 518
             + + +   ++QG  +  GGK    +G+    + EPTV  +V  D  +  EE FGP+  
Sbjct: 340 DNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILP 399
Query: 519 IIKFKTLDEVIERANDTKYGLASGIVT---TNIDTANTFAHA----INAGSAVVPQAPFG 571
           I+K  ++++ IE  ND+ YGL++ + T    NI+ A +        IN G     Q    
Sbjct: 400 IVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHN 459
Query: 572 GFKESGIGRELGKAALDEYTELKTV 596
           G+K+SG G E GK  L++Y E KTV
Sbjct: 460 GWKQSGFGGEDGKFGLEQYLEKKTV 484

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 119/244 (48%), Gaps = 22/244 (9%)
Query: 380 AASNLKRVSLELGGKSPLVICADADVDMAY----YYCFVCAG------SRTYVQEDIYDT 429
           A    KR++LELGG +P  + +DADVD A     +  F+  G      +R  V +D+YD 
Sbjct: 243 AGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDE 302
Query: 430 FXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 489
           F             GD  D     GP ++     K L  I+     G +L   GKR G+ 
Sbjct: 303 FVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGN- 361
Query: 490 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNID 549
              + P VF    ++ KIA+ E+F P+ TIIK  +  E I+ ANDT+YGL+S + T++++
Sbjct: 362 --VLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLE 419
Query: 550 TANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTVT-ESP 600
               FA  I++G   V        P   FGG K SG+GR      ++E+T  K ++ +  
Sbjct: 420 KGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQ 479
Query: 601 LRSY 604
            R Y
Sbjct: 480 YRKY 483

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score =  119 bits (297), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 165/378 (43%), Gaps = 77/378 (20%)
Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M AWK  PALAAG  V+LKP+E TPLTAL +A L +   FP GV+++L G G        
Sbjct: 175 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRG-------- 225
Query: 61  KSCLSPLAYRSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAVMFT---- 116
                                               GDP        P+V  V  T    
Sbjct: 226 ---------------------------------KTVGDPLTGH----PKVRMVSLTGSIA 248
Query: 117 ---KVLNYIKSGVEQGGKLEAGGKR------KGDKGYFIEPTVFSNVTDDFKIAREEIFG 167
               ++++  S +++   +E GGK         D    IE  V    T  +  A ++   
Sbjct: 249 TGEHIISHTASSIKRT-HMELGGKAPVIVFDDAD----IEAVVEGVRTFGYYNAGQDCTA 303
Query: 168 PVQTIIKFKTLDEVIERANDTKYGLASGIV---TTNIDTANTFAHAINAGSVDAEMFTKV 224
             +   +    D ++E+       L SG     +T +   ++ AH    G    E   K 
Sbjct: 304 ACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEE--AKA 361
Query: 225 LNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 284
             +IK        +  G KRKG+ GY+  PT+ +    D  I ++E+FGPV ++  F   
Sbjct: 362 TGHIKV-------ITGGEKRKGN-GYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 413
Query: 285 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI 344
           ++V+  AND++YGLAS + T ++  A+  +  +  G  W+N +  +V + P GG K SG 
Sbjct: 414 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGY 473
Query: 345 GRELGKAALDEYTELKTV 362
           G+++    L++YT ++ V
Sbjct: 474 GKDMSLYGLEDYTVVRHV 491

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 18/234 (7%)
Query: 381 ASNLKRVSLELGGKSPLVICADADVD--------MAYYYCF--VCAGSRTYVQEDIYDTF 430
           AS++KR  +ELGGK+P+++  DAD++          YY       A  R Y Q+ IYDT 
Sbjct: 258 ASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTL 317
Query: 431 XXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDK 489
                        G P D+S + GP        +V   ++     G  K+  GG+++   
Sbjct: 318 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGN 377
Query: 490 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNID 549
           GY+  PT+ +    D  I ++E+FGPV ++  F   ++V+  AND++YGLAS + T ++ 
Sbjct: 378 GYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVG 437
Query: 550 TANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            A+  +  +  G         +V + P GG K SG G+++    L++YT ++ V
Sbjct: 438 RAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 18/237 (7%)
Query: 378 AAAASNLKRVSLELGGKSPLVICADADVD--------MAYYYCF--VCAGSRTYVQEDIY 427
           AAAA  +KR  LELGGK+P+++  DAD++          YY       A  R Y +  IY
Sbjct: 257 AAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIY 316
Query: 428 DTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRK 486
           +                   D   + GP +      +V ++++   +Q   ++  GG+  
Sbjct: 317 EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG 376
Query: 487 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT 546
            D+G+F +PTV +  T + +I R E+FGPV ++ +F   D+ +  AND+ YGLAS + T 
Sbjct: 377 SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTK 436
Query: 547 NIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
           +I  A   A         IN    +  + P GG K+SG G++    AL++YT ++ +
Sbjct: 437 DISKAXRAASRLQYGCTWINTHFXLTNEXPHGGIKQSGYGKDXSVYALEDYTAVRHI 493

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 138/283 (48%), Gaps = 33/283 (11%)
Query: 343 GIGRELGKAALDEYTELKTVT-----ESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPL 397
           G+G E+G A L E+  ++ +      E  L+ Y +   +A    +  KR  +E GGK+ +
Sbjct: 238 GVGEEVG-AYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQ-TWFKRAYVETGGKNAI 295
Query: 398 VICADADVDMA------YYYCF----VCAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPF 447
           ++   AD D+A        Y F      A SR  + +  Y+               G P 
Sbjct: 296 IVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PA 354
Query: 448 DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI 507
           +++   GP V AE   KVL+YI+ G  +G +L  GGKR   +GYFI PTVF+ V    +I
Sbjct: 355 EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARI 413
Query: 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS----- 562
           A+EEIFGPV ++I+ K   E +E ANDT YGL  G+ +   +         + G+     
Sbjct: 414 AQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNR 473
Query: 563 ----AVVPQAPFGGFKESGIGRELGKAALDE---YTELKTVTE 598
               A+V   PFGGFK SG   + G  ALD    + E+K V E
Sbjct: 474 KITGALVGVQPFGGFKLSGTNAKTG--ALDYLRLFLEMKAVAE 514

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score =  115 bits (288), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 137/283 (48%), Gaps = 33/283 (11%)
Query: 343 GIGRELGKAALDEYTELKTVT-----ESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPL 397
           G+G E+G A L E+  ++ +      E  L+ Y +   +A    +  KR  +E GGK  +
Sbjct: 238 GVGEEVG-AYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQ-TWFKRAYVETGGKDAI 295
Query: 398 VICADADVDMA------YYYCF----VCAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPF 447
           ++   AD D+A        Y F      A SR  + +  Y+               G P 
Sbjct: 296 IVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PA 354
Query: 448 DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI 507
           +++   GP V AE   KVL+YI+ G  +G +L  GGKR   +GYFI PTVF+ V    +I
Sbjct: 355 EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARI 413
Query: 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS----- 562
           A+EEIFGPV ++I+ K   E +E ANDT YGL  G+ +   +         + G+     
Sbjct: 414 AQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNR 473
Query: 563 ----AVVPQAPFGGFKESGIGRELGKAALDE---YTELKTVTE 598
               A+V   PFGGFK SG   + G  ALD    + E+K V E
Sbjct: 474 KITGALVGVQPFGGFKLSGTNAKTG--ALDYLRLFLEMKAVAE 514

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score =  115 bits (287), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 117/249 (46%), Gaps = 22/249 (8%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV---------CAGSR 419
           S T+  I+   AA+++KRVS+ELGG +P ++   A+VD A               C  S 
Sbjct: 237 STTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSN 296
Query: 420 TY-VQEDIYDTFXXX-XXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG 477
            + VQ  I+D F              G+ F++   QGP ++ +   KV   +   V +G 
Sbjct: 297 QFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGA 356
Query: 478 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
            +  GGKR      F EPT+  NVT D     EE FGP+  +IKF T +E I  AN    
Sbjct: 357 TVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADV 416
Query: 538 GLASGIVTTNIDTANTFAHA---------INAGSAVVPQAPFGGFKESGIGRELGKAALD 588
           GLA    +   D A  +  A         +N G     + PFGG K+SG+GRE  K  +D
Sbjct: 417 GLAGYFYSQ--DPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGID 474
Query: 589 EYTELKTVT 597
           EY ELK V 
Sbjct: 475 EYLELKYVC 483

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score =  115 bits (287), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 136/283 (48%), Gaps = 33/283 (11%)
Query: 343 GIGRELGKAALDEYTELKTVT-----ESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPL 397
           G+G E+G A L E+  ++ +      E  L+ Y +   +A    +  KR  +E GGK  +
Sbjct: 238 GVGEEVG-AYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQ-TWFKRAYVETGGKDAI 295
Query: 398 VICADADVDMAYYYCFVCA----------GSRTYVQEDIYDTFXXXXXXXXXXXXXGDPF 447
           ++   AD D+A     V A           SR  + +  Y+               G P 
Sbjct: 296 IVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSVG-PA 354
Query: 448 DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI 507
           +++   GP V AE   KVL+YI+ G  +G +L  GGKR   +GYFI PTVF+ V    +I
Sbjct: 355 EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARI 413
Query: 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS----- 562
           A+EEIFGPV ++I+ K   E +E ANDT YGL  G+ +   +         + G+     
Sbjct: 414 AQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNR 473
Query: 563 ----AVVPQAPFGGFKESGIGRELGKAALDE---YTELKTVTE 598
               A+V   PFGGFK SG   + G  ALD    + E+K V E
Sbjct: 474 KITGALVGVQPFGGFKLSGTNAKTG--ALDYLRLFLEMKAVAE 514

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF-----------VCAG 417
           S T+  I+   AA+++KRVS+ELGG +P ++   A+VD A                VC+ 
Sbjct: 237 STTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCS- 295
Query: 418 SRTYVQEDIYDTFXXX-XXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQG 476
           ++  VQ  I+D F              G+ F++   QGP ++ +   KV   +   V +G
Sbjct: 296 NQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKG 355
Query: 477 GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
             +  GGKR      F EPT+  NVT D     EE FGP+  +IKF T +E I  AN   
Sbjct: 356 ATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAAD 415
Query: 537 YGLASGIVTTNIDTANTFAHA---------INAGSAVVPQAPFGGFKESGIGRELGKAAL 587
            GLA    +   D A  +  A         +N G     + PFGG K+SG+GRE  K  +
Sbjct: 416 VGLAGYFYSQ--DPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGI 473
Query: 588 DEYTELKTVT 597
           DEY ELK V 
Sbjct: 474 DEYLELKYVC 483

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 22/236 (9%)
Query: 381 ASNLKRVSLELGGKSPLVICADADVDMAYYYCF-----------VCAGSRTYVQEDIYDT 429
           A  +K+++LELGG +P ++  DAD++ A                VCA +R +V E + D 
Sbjct: 247 AEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCA-NRIFVHEKVADA 305
Query: 430 FXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK--RKG 487
           F             GD  +  +  GP ++ + F KV  +++  +++G  L AG +    G
Sbjct: 306 FGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELG 365
Query: 488 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN 547
           D G F  PTV   V  +    +EE FGP+     F+T +EVI+  NDT++GLAS + T +
Sbjct: 366 D-GLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTAD 424
Query: 548 IDTANTFAHAI-------NAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            + A   A  +       N G+   P+APFGG K SGIGRE G   L E+ E +TV
Sbjct: 425 AERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV 480

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 117/234 (50%), Gaps = 23/234 (9%)
Query: 384 LKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGS------RTYVQEDIYDTFXXX 433
            K+++LELGG +P ++  DAD++ A        F+ AG          V E I D F   
Sbjct: 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEM 294
Query: 434 XXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
                     G+P D+    GP +  E    V   ++  +++GGKL  GGKR  DK  F 
Sbjct: 295 FVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALFY 352
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
            PT+   V  D  + + E F PV  II+    +E+I+ AN T+YGL S I T +I+ +  
Sbjct: 353 -PTILE-VDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLK 409
Query: 554 FAHAINAGSAVVPQA--------PFGGFKESGIGRELGKAALDEYTELKTVTES 599
           FA  +  G  V+  +        PFGG K+SG+GRE  K A++E + +KT+  S
Sbjct: 410 FAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 125/269 (46%), Gaps = 33/269 (12%)
Query: 355 EYTELKTVT---ESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD----- 406
           E+ E+K ++     P+  Y          + NLKRV    G K+  ++  DA+++     
Sbjct: 216 EHPEIKAISFVGSKPVGEYVYKK-----GSENLKRVQSLTGAKNHTIVLNDANLEDTVTN 270
Query: 407 -------MAYYYCFVCAGSRTYVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDA 459
                   A   C  CA     V+E I D F             G+  D  V  GP +  
Sbjct: 271 IVGAAFGSAGERCMACA--VVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIRE 328
Query: 460 EMFTKVLNYIKSGVEQGGKLEAGGKRK-GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT 518
           +   + L+YI+ G+E+G +L   G+    D GYF+ PT+F NVT +  I ++EIF PV +
Sbjct: 329 DNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLS 388
Query: 519 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------PQA--PF 570
           +I+ K L E IE AN +++   + + T+N +    F   I+AG   +      P A  PF
Sbjct: 389 VIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPF 448
Query: 571 GGFKESGIG--RELGKAALDEYTELKTVT 597
            G+K S  G     GK ++D YT  K VT
Sbjct: 449 SGWKSSFFGTLHANGKDSVDFYTRKKVVT 477

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score =  108 bits (271), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 17/230 (7%)
Query: 384 LKRVSLELGGKSPLVICADADVDMAYYYCF---------VCAGSRTY-VQEDIYDTFXXX 433
           LK+  LELGG  P ++  DAD+++A              VCA ++ + V+E I   F   
Sbjct: 228 LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDR 287
Query: 434 XXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
                     GDP  +    GP    ++  ++   +++ V +G +L  GG++   +G + 
Sbjct: 288 FVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYY 347
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
             TV ++VT D    R+E+FGPV  I   K     +  AND+++GL++ I T +   A  
Sbjct: 348 AATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAE 407
Query: 554 FAHAINAG-------SAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            A  +  G       SA   +  FGG K+SG GREL    L E+  ++TV
Sbjct: 408 XAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 21/226 (9%)
Query: 384 LKRVSLELGGKSPLVICADADVDMA---------YYYCFVCAG-SRTYVQEDIYDTFXXX 433
           +K V+LELGG +P V+ ADAD+D A          +   +C   +R  V   ++D F   
Sbjct: 254 MKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEK 313
Query: 434 XXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
                     GDP  +    GP ++    + +   I+   ++G  ++  G  +G     +
Sbjct: 314 FVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEG---RLV 370
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
            P VFS+VT D +IAREEIFGP+ +++K        E AN + +GL++ + + +ID A  
Sbjct: 371 HPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQ 430
Query: 554 FAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYT 591
           FA  I++G   +        P   FGG K SG+GR  G  A++E+T
Sbjct: 431 FALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFT 476

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 17/242 (7%)
Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDM---------AYYYCFVCAGS-RTYVQ 423
           S +A AA  NLK+ + ELGG    ++  DAD  +          Y    VC  S R  V+
Sbjct: 215 SAVAEAAGKNLKKSTXELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVE 274
Query: 424 EDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           +  YD               GDP +      P    +   K+   +K  ++ G K+    
Sbjct: 275 KSRYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQY 334
Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
                KG F  PT+ +++  D  +  +E+FGP+  +   +  +  I+ AND+ YGL S +
Sbjct: 335 PEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSV 394
Query: 544 VTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIGRELGKAALDEYTELKTV 596
           + ++ID A   +  I  G  V+        + PFGG K+SG GREL    L  +     V
Sbjct: 395 IGSDIDRAKKVSAQIETGXTVINGRWITSGELPFGGIKKSGYGRELSGLGLXAFVNEHLV 454
Query: 597 TE 598
            +
Sbjct: 455 ID 456

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 29/276 (10%)
Query: 345 GRELGKA-ALDEYTELKTVTESPLRSYTSH--SIMAAAAASNLKRVSLELGGKSPLVICA 401
           G ++G A A DE  +L + T S      +H   ++A        R  LELGG + +++  
Sbjct: 225 GADIGTAMAKDERVDLLSFTGS------THVGKMVAMMVQERFGRKLLELGGNNAIIVFE 278
Query: 402 DADVDM----AYYYCFVCAGSRT------YVQEDIYDTFXXXXXXXXXXXXXGDPFDKSV 451
           DAD+++    A +     AG R        + E ++D               GDP+D S 
Sbjct: 279 DADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDPWDPST 338
Query: 452 QQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 511
             GP    +   + L  I+   +QGG L  GGK     G ++EPT+ + +  D  I   E
Sbjct: 339 LYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAPIVHTE 398
Query: 512 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV----PQ 567
            F P+  ++KFKT +E     N+ + GL+S I T ++     +     +   +V    P 
Sbjct: 399 TFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPT 458
Query: 568 A------PFGGFKESGIGRELGKAALDEYTELKTVT 597
           +       FGG K +G GRE G  +  +Y    T T
Sbjct: 459 SGAEIGGAFGGEKHTGGGRESGSDSWKQYMRRSTCT 494

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 23/235 (9%)
Query: 384 LKRVSLELGGKSPLVICADADVDMAY----YYCFVCAGSR------TYVQEDIYDTFXXX 433
           +K+  +ELGG  P ++  DAD+D+A        +  AG R         +  +Y      
Sbjct: 257 VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEE 316
Query: 434 XXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
                     GDP D +V  GP +      +++  I+  VE+GG++ AGG+R G    ++
Sbjct: 317 VAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YV 374
Query: 494 EPTVFSNVTD---DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDT 550
           +PT+     D   D  + + E+F PV + ++ K LD+ IE AN   YGL + +   ++  
Sbjct: 375 QPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 434
Query: 551 ANTFAHAINAGSAVV---PQA-----PFGGFKESGIGRELGKAALDEYTELKTVT 597
                  +  G+  +   P+      PFGG K+SG+ RE    A++  T  KT+ 
Sbjct: 435 IRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 23/235 (9%)
Query: 384 LKRVSLELGGKSPLVICADADVDMAY----YYCFVCAGSR------TYVQEDIYDTFXXX 433
           +K+  +ELGG  P ++  DAD+D+A        +  AG R         +  +Y      
Sbjct: 257 VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEE 316
Query: 434 XXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
                     GDP D +V  GP +      +++  I+  VE+GG++ AGG+R G    ++
Sbjct: 317 VAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YV 374
Query: 494 EPTVFSNVTD---DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDT 550
           +PT+     D   D  + + E+F PV   ++ K LD+ IE AN   YGL + +   ++  
Sbjct: 375 QPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 434
Query: 551 ANTFAHAINAGSAVV---PQA-----PFGGFKESGIGRELGKAALDEYTELKTVT 597
                  +  G+  +   P+      PFGG K+SG+ RE    A++  T  KT+ 
Sbjct: 435 IRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 384 LKRVSLELGGKSPLVICADADVDMAY----YYCFVCAGSR------TYVQEDIYDTFXXX 433
           +K+  +ELGG  P ++  DAD+D+A        +  AG R         +  +Y      
Sbjct: 257 VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEE 316
Query: 434 XXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
                     GDP D +V  GP +      +++  I+  VE+GG++ AGG+R G    ++
Sbjct: 317 VAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YV 374
Query: 494 EPTVFSNVTD---DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDT 550
           +PT      D   D  + + E+F PV   ++ K LD+ IE AN   YGL + +   ++  
Sbjct: 375 QPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 434
Query: 551 ANTFAHAINAGSAVV---PQA-----PFGGFKESGIGRELGKAALDEYTELKTVT 597
                  +  G+  +   P+      PFGG K+SG+ RE    A++  T  KT+ 
Sbjct: 435 IRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 387 VSLELGGKSPLVICADADVDM--------AYYYC--FVCAGSRTYVQEDIYDTFXXXXXX 436
           V LELGGK P ++  DAD+ +        A+ Y      A  R +VQ+ + D        
Sbjct: 256 VVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKE 315
Query: 437 XXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 496
                  G P D +    P +D +    +   I   +E G  L +G KR+G+    + PT
Sbjct: 316 LVEQLTVGSPEDDA-DITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN---LLSPT 371
Query: 497 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA-NTFA 555
           +  +VT   ++A EE FGPV  II+ K  +E I  +N + YGL + I T + D A N   
Sbjct: 372 LLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGK 431
Query: 556 H------AINAGSAVVPQA-PFGGFKESGIGRELGKAALDEYT 591
           H       INA +   P   PF G K+SG+G +  K +L   T
Sbjct: 432 HLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMT 474

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 386 RVSLELGGKSPLVICADADVDM----AYYYCFVCAGSRT------YVQEDIYDTFXXXXX 435
           R  LELGG + ++   DAD+ +    A +     AG R       ++ E I+D       
Sbjct: 265 RSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLK 324
Query: 436 XXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP 495
                   G+P+D +V  GP    +  +  L  ++   ++GG +  GGK     G ++EP
Sbjct: 325 KAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEP 384
Query: 496 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 555
           T+ + +  D  IA  E F P+  + KF+  +EV    N+ K GL+S I T ++     + 
Sbjct: 385 TIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWL 444
Query: 556 HAINAGSAVV----PQA------PFGGFKESGIGRELGKAALDEYTELKTVT 597
               +   +V    P +       FGG K +G GRE G  A  +Y    T T
Sbjct: 445 GPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCT 496

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 21/236 (8%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGS------RTYVQED 425
           +A  AA       LELGGK P ++   A++++A     +   V  G       R YV E 
Sbjct: 218 VAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAES 277
Query: 426 IYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK- 484
            ++ F               P  +    GP +  +    + ++I   VE+G  +  GGK 
Sbjct: 278 KFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKV 337
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
            +   G++  PTV +NV    K+  EE FGP+  +  F  ++E +  ANDT YGL++ + 
Sbjct: 338 EELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVF 397
Query: 545 TTNIDTANTFAHAINAGSAVVPQAPF---------GGFKESGI-GRELGKAALDEY 590
             + D A   A  +NAG+  +  A             F  SG+ G  +G A L  +
Sbjct: 398 AGSEDEALKVARQLNAGAISINDAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRF 453

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 108/243 (44%), Gaps = 25/243 (10%)
Query: 380 AASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGSRTY-------VQEDIYD 428
           AA N KR     G K+  +I  DAD+D A        +  AG R         V E+  +
Sbjct: 260 AAXNGKRAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETAN 319
Query: 429 TFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG---KR 485
                          G   D+    GP V  E   ++ + I SG+EQG KL   G   K 
Sbjct: 320 RLIDKLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKL 379
Query: 486 KG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
           +G + G+FI   +F +VT D  I + EIFGPV ++++ +  +E +      +YG    I 
Sbjct: 380 QGYENGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIY 439
Query: 545 TTNIDTANTFAHAINAGSA------VVPQA--PFGGFKESGIG--RELGKAALDEYTELK 594
           T + D A  FA  IN G         VP A   FGG+K S  G   + G  ++  +T  K
Sbjct: 440 TRDGDAARDFASRINIGXVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTK 499
Query: 595 TVT 597
           T+T
Sbjct: 500 TIT 502

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 23/242 (9%)
Query: 382  SNLKRVSLELGGKSPLVICADAD----VDMAYYYCF------VCAGSRTYVQEDIYDTFX 431
            +N+K++  E+GGK+ ++I  DAD    V    Y  F        A SR  V + +YD F 
Sbjct: 773  ANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFI 832
Query: 432  XXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
                        G   D +   G   D +    +  Y + G  +G  L       G+ GY
Sbjct: 833  ERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGE-GY 891
Query: 492  FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN---- 547
            F+  T+   +  + +IA+EEIFGPV  +++ K  D+ IE AN T++ L  GI + +    
Sbjct: 892  FVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHL 951
Query: 548  ------IDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELGKA-ALDEYTELKTVTESP 600
                      N + +  N G A+V + PFGG + SG+G + G    L  + + + VTE+ 
Sbjct: 952  AKARREFRVGNLYINRNNTG-ALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010
Query: 601  LR 602
            +R
Sbjct: 1011 MR 1012

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 382 SNLKRVSLELGGKSPLVICADADVDM--------AYYYC--FVCAGSRTYVQEDIYDTFX 431
           + ++ + LELGGK   ++  DAD+++        A+ Y      A  R  V E + D   
Sbjct: 242 AGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 432 XXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
                       G+P D +    P +D +    V   I    ++G       KR+G+   
Sbjct: 302 EKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIKREGN--- 357
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA 551
            I P +F  VT D ++A EE FGPV  II+  +++E IE +N ++YGL + I T +   A
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417
Query: 552 NTFAHAINAGSAVVPQA--------PFGGFKESGIGRELGKAALDEYTELKTVT 597
              A  +  G+  +           PF G K+SG G +  K +++  T +K+V 
Sbjct: 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 382 SNLKRVSLELGGKSPLVICADADVDM--------AYYYC--FVCAGSRTYVQEDIYDTFX 431
           + ++ + LELGGK   ++  DAD+++        A+ Y      A  R  V E + D   
Sbjct: 242 AGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 432 XXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
                       G+P D +    P +D +    V   I    ++G       KR+G+   
Sbjct: 302 EKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIKREGN--- 357
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA 551
            I P +F  VT D ++A EE FGPV  II+  +++E IE +N ++YGL + I T +   A
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417
Query: 552 NTFAHAINAGSAVVPQA--------PFGGFKESGIGRELGKAALDEYTELKTVT 597
              A  +  G+  +           PF G K+SG G +  K +++  T +K+V 
Sbjct: 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 382 SNLKRVSLELGGKSPLVICADADVDM--------AYYYC--FVCAGSRTYVQEDIYDTFX 431
           + ++ + LELGGK   ++  DAD+++        A+ Y      A  R  V E + D   
Sbjct: 242 AGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELV 301
Query: 432 XXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
                       G+P D +    P +D +    V   I    ++G       KR+G+   
Sbjct: 302 EKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIKREGN--- 357
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA 551
            I P +F  VT D ++A EE FGPV  II+  +++E IE +N ++YGL + I T +   A
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417
Query: 552 NTFAHAINAGSAVVPQA--------PFGGFKESGIGRELGKAALDEYTELKTVT 597
              A  +  G+  +           PF G K+SG G +  K +++  T +K+V 
Sbjct: 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 382 SNLKRVSLELGGKSPLVICADADVDM--------AYYYC--FVCAGSRTYVQEDIYDTFX 431
           + ++ + L LGGK   ++  DAD+++        A+ Y      A  R  V E + D   
Sbjct: 242 AGMRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 432 XXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
                       G+P D +    P +D +    V   I    ++G       KR+G+   
Sbjct: 302 EKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIKREGN--- 357
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA 551
            I P +F  VT D ++A EE FGPV  II+  +++E IE +N ++YGL + I T +   A
Sbjct: 358 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417
Query: 552 NTFAHAINAGSAVVPQA--------PFGGFKESGIGRELGKAALDEYTELKTVT 597
              A  +  G+  +           PF G K+SG G +  K +++  T +K+V 
Sbjct: 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 36/251 (14%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGSRTY--------- 421
           I+  AAA +L  V+LELGGKSP  +  + D+D+A        F+ +G             
Sbjct: 211 IIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDP 270
Query: 422 -VQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
            +Q  I +               G+   KS   G  + A  F +V+     G+ +G K+ 
Sbjct: 271 SIQNQIVEKLKKSLKEFY-----GEDAKKSRDYGRIISARHFQRVM-----GLIEGQKVA 320
Query: 481 AGGKRKGDKG-YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 539
            GG   GD    +I PT+ ++V     + +EEIFGPV  I+  ++L+E I+  N  +  L
Sbjct: 321 YGGT--GDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPL 378
Query: 540 ASGIVTTNIDT-----ANTFAHAINAGSAVV----PQAPFGGFKESGIGRELGKAALDEY 590
           A  + ++N        A T +  + A   +V       PFGG   SG+G   GK + + +
Sbjct: 379 ALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETF 438
Query: 591 TELKTVTESPL 601
           +  ++    PL
Sbjct: 439 SHRRSCLVRPL 449

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 28/241 (11%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGSRTYVQED--IYD 428
           I+ AAAA +L  V+LELGGKSP  +  D D+D+A        F+ +G +T V  D  + D
Sbjct: 194 IVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSG-QTCVAPDYILCD 252
Query: 429 TFXXXXXXXXXXXXXGDPFDKSVQQ----GPQVDAEMFTKVLNYI-KSGVEQGGKLEAGG 483
                           D + +  +Q    G  ++   F +V   I    V  GG  +   
Sbjct: 253 PSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQSS 312
Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           +       +I PT+  +V     + +EEIFGPV  I+  ++L+E I+  N  +  LA  +
Sbjct: 313 R-------YIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYV 365
Query: 544 VTTNIDT-----ANTFAHAINAGSAV----VPQAPFGGFKESGIGRELGKAALDEYTELK 594
            + N        A T +  + A   +    VP  PFGG   SG+G   GK + + ++  +
Sbjct: 366 FSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRR 425
Query: 595 T 595
           +
Sbjct: 426 S 426

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 412 CFVCAGSRT------YVQEDIYDTFXXXXXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKV 465
            F  AG R       +VQED+ D               GDP D +   GP +D E   ++
Sbjct: 786 AFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRL 845
Query: 466 LNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK-- 523
             +I + ++   +L   G     +G F+ P +F  +T+  ++  EE+FGP+  +++++  
Sbjct: 846 DAHI-ARMKTEARLHFAG--PAPEGCFVAPHIF-ELTEAGQLT-EEVFGPILHVVRYRPE 900
Query: 524 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFK 574
            L+ V+     T YGL  G+ +   D+       +  G+         AVV   PFGG  
Sbjct: 901 NLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNG 960
Query: 575 ESGIGRELG 583
            SG G + G
Sbjct: 961 LSGTGPKAG 969

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 34/228 (14%)
Query: 386 RVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTFXXX 433
           R++ E GGK+   +   ADV+         A+ Y    C  C  SR YV   ++      
Sbjct: 313 RLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSAC--SRLYVPHSLWPQIKGR 370
Query: 434 XXXXXXXXXXGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGY 491
                     GDP  D        +DA+ F ++  +++         + AGGK     GY
Sbjct: 371 LLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGY 430
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIERANDTKYGLASGIVTT 546
           F+EP +  +      I +EEIFGPV ++      K+K   ++++  + T YGL   + + 
Sbjct: 431 FVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVD--STTSYGLTGAVFSQ 488
Query: 547 NIDT-----------ANTFAHAINAGSAVVPQAPFGGFKESGIGRELG 583
           + D            A  F     +  ++V Q PFGG + SG   + G
Sbjct: 489 DKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 34/228 (14%)
Query: 386 RVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTFXXX 433
           R++ E GGK+   +   ADV+         A+ Y    C  CA  R YV   ++      
Sbjct: 313 RLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACA--RLYVPHSLWPQIKGR 370
Query: 434 XXXXXXXXXXGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGY 491
                     GDP  D        +DA+ F ++  +++         + AGGK     GY
Sbjct: 371 LLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGY 430
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIERANDTKYGLASGIVTT 546
           F+EP +  +      I +EEIFGPV ++      K+K   ++++  + T YGL   + + 
Sbjct: 431 FVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVD--STTSYGLTGAVFSQ 488
Query: 547 NIDT-----------ANTFAHAINAGSAVVPQAPFGGFKESGIGRELG 583
           + D            A  F     +  ++V Q PFGG + SG   + G
Sbjct: 489 DKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536

>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 25/244 (10%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGSRTYVQEDIYDTF 430
           ++  AAA +L  V LELGGK PL++  DAD+D       +  F+ +G      + +Y  +
Sbjct: 221 VVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHY 280
Query: 431 XXXXXXXXXXXXXGDPFDKSVQQGPQVDA--EMFT-KVLNYIKSGVE-QGGKLEAGGKRK 486
                            ++   + P++++  ++ T + +  + S +E   G++  G +  
Sbjct: 281 SVKDALLERL------VERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGSQAD 334
Query: 487 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK-YGLASGIVT 545
             K   +  TV   V  +  +  EE+FGP+  +++F ++   I++ N      LA  +  
Sbjct: 335 VSKRA-LSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFG 393
Query: 546 TNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            ++D A    + I +G A V         P  PFGG   SG+G   G  +   +T  K+V
Sbjct: 394 KDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
Query: 597 TESP 600
              P
Sbjct: 454 RIVP 457

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 25/244 (10%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGSRTYVQEDIYDTF 430
           ++  AAA +L  V LELGGK PL++  DAD+D       +  F+ +G      + +Y  +
Sbjct: 221 VVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHY 280
Query: 431 XXXXXXXXXXXXXGDPFDKSVQQGPQVDA--EMFT-KVLNYIKSGVE-QGGKLEAGGKRK 486
                            ++   + P++++  ++ T + +  + S +E   G++  G +  
Sbjct: 281 SVKDALLERL------VERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGSQAD 334
Query: 487 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK-YGLASGIVT 545
             K   +  TV   V  +  +  EE+FGP+  +++F ++   I++ N      LA  +  
Sbjct: 335 VSKRA-LSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFG 393
Query: 546 TNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            ++D A    + I +G A V         P  PFGG   SG+G   G  +   +T  K+V
Sbjct: 394 KDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
Query: 597 TESP 600
              P
Sbjct: 454 RIVP 457

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 34/228 (14%)
Query: 386 RVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTFXXX 433
           R++ E GGK+   + + ADVD         A+ Y    C  C  SR YV + ++      
Sbjct: 310 RLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSAC--SRLYVPKSLWPQIKGR 367
Query: 434 XXXXXXXXXXGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGY 491
                     GDP  D        +DA+ F ++  +++         + AGG+     GY
Sbjct: 368 LLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGY 427
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIERANDTKYGLASGIVTT 546
           ++EP +  +      I +EEIFGPV T+      K++   ++++  + T YGL   +   
Sbjct: 428 YVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVD--STTSYGLTGAVFAQ 485
Query: 547 N-----------IDTANTFAHAINAGSAVVPQAPFGGFKESGIGRELG 583
           +            + A  F     +  +VV Q PFGG + SG   + G
Sbjct: 486 DKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPG 533

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 34/228 (14%)
Query: 386 RVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTFXXX 433
           R++ E GGK+   +   ADV+         A+ Y    C  C   R YV   ++      
Sbjct: 313 RLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACL--RLYVPHSLWPQIKGR 370
Query: 434 XXXXXXXXXXGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGY 491
                     GDP  D        +DA+ F ++  +++         + AGGK     GY
Sbjct: 371 LLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGY 430
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIERANDTKYGLASGIVTT 546
           F+EP +  +      I +EEIFGPV ++      K+K   ++++  + T YGL   + + 
Sbjct: 431 FVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVD--STTSYGLTGAVFSQ 488
Query: 547 NIDT-----------ANTFAHAINAGSAVVPQAPFGGFKESGIGRELG 583
           + D            A  F     +  ++V Q PFGG + SG   + G
Sbjct: 489 DKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 85/219 (38%), Gaps = 27/219 (12%)
Query: 385 KRVSLELGGKSPLVICADADVDMAYY----YCFVCAGSRTYVQEDIY-------DTFXXX 433
           K ++LE GG +PLV+   AD+D A Y      F+ AG R      +        D     
Sbjct: 243 KILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLAR 302
Query: 434 XXXXXXXXXXGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQ----GGKLEAGGKRKGDK 489
                     G  FD+  Q  P   A +      ++    E     G +      +  D 
Sbjct: 303 LVAVSATLRVGR-FDE--QPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDG 359
Query: 490 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNID 549
              + P +  +V+   +   EE FGP+  +I++      I  AN T+YGLA+G+++ + +
Sbjct: 360 AALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRE 418
Query: 550 TANTFAHAINAG--------SAVVPQAPFGGFKESGIGR 580
               F     AG        +     APFGG   SG  R
Sbjct: 419 RFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHR 457

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	605
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	1e-128
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	1e-85
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	2e-80
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	2e-25
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	1e-127
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	2e-85
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	2e-80
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	2e-25
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	1e-125
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	5e-83
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	1e-77
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	1e-25
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	1e-125
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	4e-83
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	3e-77
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	1e-24
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	1e-123
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	1e-84
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	2e-76
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	2e-24
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	1e-122
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	1e-82
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	2e-75
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	4e-24
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	1e-122
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	2e-82
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	2e-76
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	2e-24
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	1e-122
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	3e-82
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	2e-76
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	2e-22
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	1e-121
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	1e-82
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	6e-76
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	4e-25
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	1e-119
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	6e-80
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	6e-74
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	8e-22
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	1e-118
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	1e-79
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	6e-74
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	7e-22
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	1e-116
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	2e-76
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	7e-72
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	3e-24
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	1e-109
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	1e-71
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	2e-70
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	7e-22
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	1e-108
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	6e-72
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	3e-66
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	5e-21
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	1e-107
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	2e-71
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	2e-65
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	5e-21
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	1e-107
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	3e-71
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	1e-64
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	1e-19
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	1e-100
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	8e-68
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	1e-63
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	5e-22
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	2e-97
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	1e-62
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	1e-59
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	6e-20
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	8e-90
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	2e-57
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	2e-54
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	3e-22
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	2e-87
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	2e-57
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	9e-54
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	3e-21
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	1e-86
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	5e-55
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	6e-52
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	6e-20
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	3e-83
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-54
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-49
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-19
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	9e-83
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	2e-52
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	1e-48
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	5e-18
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	1e-81
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	1e-52
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	2e-49
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	1e-19
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	1e-81
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	2e-50
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	4e-50
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	1e-14
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	3e-81
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	3e-51
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	2e-48
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	1e-19
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	5e-79
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	9e-48
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	3e-46
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	1e-15
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	1e-74
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	5e-47
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	1e-44
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	8e-14
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	2e-74
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	4e-47
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	2e-44
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	1e-13
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	5e-74
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	2e-43
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	3e-43
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	2e-18
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	8e-74
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	4e-44
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	1e-43
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	2e-18
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	1e-73
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	5e-44
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	1e-43
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	2e-18
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	7e-73
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	2e-43
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	5e-43
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	3e-18
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	9e-73
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	3e-43
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	1e-42
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	3e-18
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	2e-72
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	3e-44
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	2e-42
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	2e-18
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	7e-71
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	1e-47
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	1e-46
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	3e-16
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	3e-55
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	2e-35
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	4e-35
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	4e-11
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	4e-49
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	2e-34
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	1e-33
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	2e-09
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	1e-46
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	6e-33
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	6e-32
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	2e-09
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	5e-43
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	3e-33
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	8e-23
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	3e-42
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	4e-29
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	3e-23
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	4e-15
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	2e-38
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	1e-25
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	4e-23
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	4e-13
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	9e-37
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	8e-27
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	5e-25
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	8e-10
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	1e-33
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	7e-22
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	2e-13
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	5e-30
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	4e-18
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	8e-09
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	7e-28
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	2e-22
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	8e-16
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-06

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  384 bits (989), Expect = e-128
 Identities = 129/244 (52%), Positives = 167/244 (68%), Gaps = 17/244 (6%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----------CAGSRT 420
               I  AA  SNLKRVSLELGGKSP ++ ADAD+D A  +              A SR 
Sbjct: 250 VGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRL 309

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +V+E IYD FV+++VE+A    +G+P    V QGPQ+D E + K+L+ I+SG ++G KLE
Sbjct: 310 FVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLE 369

Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
            GG   G+KGYFI+PTVFS+VTDD +IA+EEIFGPVQ I+KFK+LD+VI+RAN+T YGL+
Sbjct: 370 CGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLS 429

Query: 541 SGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTEL 593
           +GI T +ID A T + A+ +G+        V  Q PFGGFK SG GRELG+    EYTE+
Sbjct: 430 AGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEV 489

Query: 594 KTVT 597
           KTVT
Sbjct: 490 KTVT 493

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  274 bits (704), Expect = 1e-85
 Identities = 98/196 (50%), Positives = 131/196 (66%), Gaps = 14/196 (7%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
           V+  I  + +   +ERA     G             N     ++ G  +D E + K+L+ 
Sbjct: 311 VEESIYDEFVRRSVERAKKYVLG-------------NPLTPGVSQGPQIDKEQYEKILDL 357

Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
           I+SG ++G KLE GG   G+KGYFI+PTVFS+VTDD +IA+EEIFGPVQ I+KFK+LD+V
Sbjct: 358 IESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDV 417

Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRE 347
           I+RAN+T YGL++GI T +ID A T + A+ +G+VW+NCY  V  Q PFGGFK SG GRE
Sbjct: 418 IKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRE 477

Query: 348 LGKAALDEYTELKTVT 363
           LG+    EYTE+KTVT
Sbjct: 478 LGEYGFHEYTEVKTVT 493

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  261 bits (669), Expect = 2e-80
 Identities = 81/146 (55%), Positives = 113/146 (77%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR +V+E IYD FV+++VE+A    +G+P    V QGPQ+D   + K+L+ I+SG ++G 
Sbjct: 307 SRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGA 366

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           KLE GG   G+KGYFI+PTVFS+VTDD +IA+EEIFGPVQ I+KFK+LD+VI+RAN+T Y
Sbjct: 367 KLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFY 426

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL++GI T +ID A T + A+ +G+V
Sbjct: 427 GLSAGIFTNDIDKAITVSSALQSGTV 452

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  109 bits (274), Expect = 2e-25
 Identities = 32/53 (60%), Positives = 44/53 (83%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M  WK GPAL+ G  V++KPAEQTPLTAL++ +L ++AGFP GV++++PGYGP
Sbjct: 175 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGP 227

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  383 bits (986), Expect = e-127
 Identities = 125/244 (51%), Positives = 163/244 (66%), Gaps = 17/244 (6%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----------CAGSRT 420
               I  AA +SNLKRV+LELGGKSP +I +DAD+D A                CAGSRT
Sbjct: 249 IGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRT 308

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +VQEDIYD FV+++V +A +R VG+PFD   +QGPQVD   F K+L YI +G ++G KL 
Sbjct: 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 368

Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
            GG    D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ YGLA
Sbjct: 369 CGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLA 428

Query: 541 SGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTEL 593
           + + T ++D AN  + A+ AG+           Q+PFGG+K SG GRELG+  L  YTE+
Sbjct: 429 AAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEV 488

Query: 594 KTVT 597
           KTVT
Sbjct: 489 KTVT 492

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  274 bits (702), Expect = 2e-85
 Identities = 89/196 (45%), Positives = 119/196 (60%), Gaps = 14/196 (7%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
           VQ  I  + ++  + RA     G             N F      G  VD   F K+L Y
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVG-------------NPFDSKTEQGPQVDETQFKKILGY 356

Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
           I +G ++G KL  GG    D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV
Sbjct: 357 INTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEV 416

Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRE 347
           + RAN++ YGLA+ + T ++D AN  + A+ AG+VW+NCY     Q+PFGG+K SG GRE
Sbjct: 417 VGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRE 476

Query: 348 LGKAALDEYTELKTVT 363
           LG+  L  YTE+KTVT
Sbjct: 477 LGEYGLQAYTEVKTVT 492

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  261 bits (669), Expect = 2e-80
 Identities = 79/146 (54%), Positives = 108/146 (73%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SRT+VQEDIYD FV+++V +A +R VG+PFD   +QGPQVD   F K+L YI +G ++G 
Sbjct: 306 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGA 365

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           KL  GG    D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN++ Y
Sbjct: 366 KLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTY 425

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GLA+ + T ++D AN  + A+ AG+V
Sbjct: 426 GLAAAVFTKDLDKANYLSQALQAGTV 451

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  109 bits (274), Expect = 2e-25
 Identities = 35/53 (66%), Positives = 44/53 (83%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M AWK GPALA G  V++K AEQTPLTALYVA L ++AGFP GV++++PG+GP
Sbjct: 174 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  378 bits (972), Expect = e-125
 Identities = 100/246 (40%), Positives = 145/246 (58%), Gaps = 19/246 (7%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----------CAGSRT 420
               IM + A SN+K+VSLELGGKSPL+I AD D++ A                 A  R 
Sbjct: 269 VGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRL 328

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +V+E I++ FV+K VE+    K+G+P ++    GPQ       K++ Y + GV++G  L 
Sbjct: 329 FVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLV 388

Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYG 538
            GG +    G+F +PTVF++V D   IA+EE FGP+  I +F    +D V+ RAN T++G
Sbjct: 389 CGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFG 448

Query: 539 LASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYT 591
           LASG+ T +I+ A   +  + AG+            APFGGFK+SG G++LG+AAL+EY 
Sbjct: 449 LASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYL 508

Query: 592 ELKTVT 597
            +KTVT
Sbjct: 509 RIKTVT 514

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  268 bits (688), Expect = 5e-83
 Identities = 75/198 (37%), Positives = 110/198 (55%), Gaps = 16/198 (8%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
           V+  I  + + +V+E     K G             N      N G         K++ Y
Sbjct: 330 VEESIHNQFVQKVVEEVEKMKIG-------------NPLERDTNHGPQNHEAHLRKLVEY 376

Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLD 285
            + GV++G  L  GG +    G+F +PTVF++V D   IA+EE FGP+  I +F    +D
Sbjct: 377 CQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVD 436

Query: 286 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIG 345
            V+ RAN T++GLASG+ T +I+ A   +  + AG+V+IN Y      APFGGFK+SG G
Sbjct: 437 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFG 496

Query: 346 RELGKAALDEYTELKTVT 363
           ++LG+AAL+EY  +KTVT
Sbjct: 497 KDLGEAALNEYLRIKTVT 514

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  254 bits (651), Expect = 1e-77
 Identities = 57/148 (38%), Positives = 90/148 (60%), Gaps = 2/148 (1%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            R +V+E I++ FV+K VE+    K+G+P ++    GPQ       K++ Y + GV++G 
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGA 385

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDT 188
            L  GG +    G+F +PTVF++V D   IA+EE FGP+  I +F    +D V+ RAN T
Sbjct: 386 TLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANAT 445

Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
           ++GLASG+ T +I+ A   +  + AG+V
Sbjct: 446 EFGLASGVFTRDINKALYVSDKLQAGTV 473

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  109 bits (276), Expect = 1e-25
 Identities = 30/53 (56%), Positives = 38/53 (71%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           ML+WK    LAAG  V++KPA+ TPLTAL  A LT +AG P GV+++LPG G 
Sbjct: 194 MLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGS 246

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  373 bits (959), Expect = e-123
 Identities = 94/246 (38%), Positives = 133/246 (54%), Gaps = 20/246 (8%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFV------CAGSRT 420
           T   IM AAA   +K VSLELGGKSPLV+  D D+D A     + CF        A SR 
Sbjct: 242 TGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
            + E I   F+ + V+     K+ DP ++  + GP V    + K+L ++ +   +G  + 
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360

Query: 481 AGGKRKG--DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
            GG R     KG+FIEPT+ ++VT + +I REE+FGPV  +  F T +E I+ ANDT YG
Sbjct: 361 TGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYG 420

Query: 539 LASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYT 591
           L + +++ +++       A  AG            QAP+GG K SG GRELG+  LD Y 
Sbjct: 421 LGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYL 480

Query: 592 ELKTVT 597
            +K VT
Sbjct: 481 SVKQVT 486

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  272 bits (697), Expect = 1e-84
 Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 20/213 (9%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
           +   I  + L+ +++   + K               +        G  V    + K+L +
Sbjct: 302 LHESIATEFLNRIVKWIKNIKIS-------------DPLEEGCRLGPVVSEGQYEKILKF 348

Query: 228 IKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 285
           + +   +G  +  GG R     KG+FIEPT+ ++VT + +I REE+FGPV  +  F T +
Sbjct: 349 VSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEE 408

Query: 286 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIG 345
           E I+ ANDT YGL + +++ +++       A  AG VW+NC Q    QAP+GG K SG G
Sbjct: 409 EAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFG 468

Query: 346 RELGKAALDEYTELKTVT----ESPLRSYTSHS 374
           RELG+  LD Y  +K VT    E P   Y   +
Sbjct: 469 RELGEWGLDNYLSVKQVTQYISEEPWGWYQPPA 501

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  250 bits (642), Expect = 2e-76
 Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 2/148 (1%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  + E I   F+ + V+     K+ DP ++  + GP V    + K+L ++ +   +G 
Sbjct: 298 SRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGA 357

Query: 131 KLEAGGKRKG--DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
            +  GG R     KG+FIEPT+ ++VT + +I REE+FGPV  +  F T +E I+ ANDT
Sbjct: 358 TILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDT 417

Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
            YGL + +++ +++       A  AG V
Sbjct: 418 VYGLGAAVISNDLERCERVTKAFKAGIV 445

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  106 bits (266), Expect = 2e-24
 Identities = 25/53 (47%), Positives = 34/53 (64%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M  WK  PALAAGC  +LKP+E   LT L +  + ++ G P GV+++L G GP
Sbjct: 167 MATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGP 219

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  370 bits (953), Expect = e-122
 Identities = 90/248 (36%), Positives = 131/248 (52%), Gaps = 22/248 (8%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFV------CAGSRT 420
           T   IM  AA +N+  ++LELGGK+P +I  DAD ++A        +        AGSR 
Sbjct: 261 TGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRI 319

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
            VQ  I D F +  +++    K+G+ FD   + GP +  E   K+ +Y+     +G  + 
Sbjct: 320 LVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIA 379

Query: 481 AGGKRKG----DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
            GGKR        G F EPTV +N     +I +EE+FGPV T+  F+T  E I+ AND+ 
Sbjct: 380 VGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSI 439

Query: 537 YGLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDE 589
           YGLA  + + +I  A   A+ +  G+           QAP+GG+K+SGIGRELGK  L+E
Sbjct: 440 YGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEE 499

Query: 590 YTELKTVT 597
           Y   K + 
Sbjct: 500 YLVSKHIL 507

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  267 bits (685), Expect = 1e-82
 Identities = 73/200 (36%), Positives = 101/200 (50%), Gaps = 18/200 (9%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
           VQ  IK K    +I+R    K G             N F      G  +  E   K+ +Y
Sbjct: 321 VQNSIKDKFEQALIDRVKKIKLG-------------NGFDADTEMGPVISTEHRNKIESY 367

Query: 228 IKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT 283
           +     +G  +  GGKR        G F EPTV +N     +I +EE+FGPV T+  F+T
Sbjct: 368 MDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427

Query: 284 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESG 343
             E I+ AND+ YGLA  + + +I  A   A+ +  G+VWIN +     QAP+GG+K+SG
Sbjct: 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSG 487

Query: 344 IGRELGKAALDEYTELKTVT 363
           IGRELGK  L+EY   K + 
Sbjct: 488 IGRELGKEGLEEYLVSKHIL 507

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  249 bits (637), Expect = 2e-75
 Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 4/150 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  VQ  I D F +  +++    K+G+ FD   + GP +      K+ +Y+     +G 
Sbjct: 317 SRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGA 376

Query: 131 KLEAGGKRKG----DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
            +  GGKR        G F EPTV +N     +I +EE+FGPV T+  F+T  E I+ AN
Sbjct: 377 TIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLAN 436

Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           D+ YGLA  + + +I  A   A+ +  G+V
Sbjct: 437 DSIYGLAGAVFSKDIGKAQRVANKLKLGTV 466

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  105 bits (264), Expect = 4e-24
 Identities = 24/53 (45%), Positives = 35/53 (66%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
             +WK  PALA GC +++KP+E TPLT + V  L ++ GFP G I+++ G G 
Sbjct: 186 QASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGS 238

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  370 bits (952), Expect = e-122
 Identities = 96/247 (38%), Positives = 138/247 (55%), Gaps = 21/247 (8%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----------CAGSRT 420
           T   + AAAA  +LK V++ELGGKSP+++  DAD++ A     +            G+R 
Sbjct: 240 TGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRV 298

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +VQ+     F++    +  A  +GDP D +   GP V      KVL+YI+ G  +G  L 
Sbjct: 299 FVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLI 358

Query: 481 AGGK---RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
            GG        +G +++PTVF++VTDD  IAREEIFGPV  ++ F   DEV+ RAN T++
Sbjct: 359 TGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEF 418

Query: 538 GLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEY 590
           GLA G+ T ++  A+     + AG+           + PFGG K+SG GRE   AAL+ Y
Sbjct: 419 GLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHY 478

Query: 591 TELKTVT 597
           +ELKTV 
Sbjct: 479 SELKTVY 485

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  267 bits (684), Expect = 2e-82
 Identities = 77/199 (38%), Positives = 108/199 (54%), Gaps = 17/199 (8%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
           VQ   K + L+ +  R      G             +   +A + G  V      KVL+Y
Sbjct: 300 VQKKAKARFLENLKRRTEAMILG-------------DPLDYATHLGPLVSKAQQEKVLSY 346

Query: 228 IKSGVEQGGKLEAGGK---RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 284
           I+ G  +G  L  GG        +G +++PTVF++VTDD  IAREEIFGPV  ++ F   
Sbjct: 347 IEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDE 406

Query: 285 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI 344
           DEV+ RAN T++GLA G+ T ++  A+     + AG++WIN Y     + PFGG K+SG 
Sbjct: 407 DEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGF 466

Query: 345 GRELGKAALDEYTELKTVT 363
           GRE   AAL+ Y+ELKTV 
Sbjct: 467 GRENSAAALEHYSELKTVY 485

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  251 bits (643), Expect = 2e-76
 Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 3/149 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           +R +VQ+     F++    +  A  +GDP D +   GP V      KVL+YI+ G  +G 
Sbjct: 296 TRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGA 355

Query: 131 KLEAGGK---RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
            L  GG        +G +++PTVF++VTDD  IAREEIFGPV  ++ F   DEV+ RAN 
Sbjct: 356 TLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANA 415

Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
           T++GLA G+ T ++  A+     + AG++
Sbjct: 416 TEFGLAGGVFTADLARAHRVVDGLEAGTL 444

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  106 bits (266), Expect = 2e-24
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           +  WK  PAL AG  ++ KP+E TPL AL +A +  +AG P G+ +V+ G   
Sbjct: 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRD 218

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  369 bits (950), Expect = e-122
 Identities = 88/250 (35%), Positives = 135/250 (54%), Gaps = 24/250 (9%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----------CAGSRT 420
           T   +M  +A   +K V+LELGGKSPL+I  D +++ A     +            G+R 
Sbjct: 245 TGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRV 303

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +VQ +I   F+++ V++  A  VGDP     + G  +      KVL ++    ++G ++ 
Sbjct: 304 FVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVL 363

Query: 481 AGGKRKG------DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 534
            GG+           GYF+ P V  N  DD    +EEIFGPV +++ F T +EV++RAN+
Sbjct: 364 CGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANN 423

Query: 535 TKYGLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAAL 587
           T +GLASG+ T +I  A+  A  + AG+           + PFGG+K SG GRE G+A +
Sbjct: 424 TTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATV 483

Query: 588 DEYTELKTVT 597
           D Y++LKTV 
Sbjct: 484 DYYSQLKTVI 493

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  266 bits (682), Expect = 3e-82
 Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 20/202 (9%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
           VQ  I  + L+EV++R      G             +        G  +      KVL +
Sbjct: 305 VQREIMPQFLEEVVKRTKAIVVG-------------DPLLTETRMGGLISKPQLDKVLGF 351

Query: 228 IKSGVEQGGKLEAGGKRKG------DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
           +    ++G ++  GG+           GYF+ P V  N  DD    +EEIFGPV +++ F
Sbjct: 352 VAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411

Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKE 341
            T +EV++RAN+T +GLASG+ T +I  A+  A  + AG+ +IN Y     + PFGG+K 
Sbjct: 412 DTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKM 471

Query: 342 SGIGRELGKAALDEYTELKTVT 363
           SG GRE G+A +D Y++LKTV 
Sbjct: 472 SGFGRENGQATVDYYSQLKTVI 493

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  250 bits (641), Expect = 2e-76
 Identities = 52/152 (34%), Positives = 84/152 (55%), Gaps = 6/152 (3%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           +R +VQ +I   F+++ V++  A  VGDP     + G  +      KVL ++    ++G 
Sbjct: 301 TRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGA 360

Query: 131 KLEAGGKRKG------DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIER 184
           ++  GG+           GYF+ P V  N  DD    +EEIFGPV +++ F T +EV++R
Sbjct: 361 RVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQR 420

Query: 185 ANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           AN+T +GLASG+ T +I  A+  A  + AG+ 
Sbjct: 421 ANNTTFGLASGVFTRDISRAHRVAANLEAGTC 452

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  100 bits (251), Expect = 2e-22
 Identities = 21/52 (40%), Positives = 33/52 (63%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
           + AWK  PALA G  V+ KP+  TP+T + +A +  +AG P G+++V+ G  
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA 222

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  369 bits (949), Expect = e-121
 Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 19/245 (7%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----------CAGSRT 420
               +   AA   +KRV LELGGK P ++ ADAD+D A                 +GSR 
Sbjct: 252 VGTKLGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRL 310

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
            VQE I D  +++ ++ +     GDP ++  + G  +      KV +Y+ +G+  G +L 
Sbjct: 311 LVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELL 370

Query: 481 AGGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 539
            GG+R G + G +  PTVF+ VT D  IAREEIFGPV + + FKT DE +  AN T++GL
Sbjct: 371 LGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGL 430

Query: 540 ASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTE 592
           ++ + +TN++TA      I AG           P+ P GG+K+SG+GRELG+   DEY++
Sbjct: 431 SASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQ 490

Query: 593 LKTVT 597
            K V 
Sbjct: 491 FKGVH 495

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  267 bits (686), Expect = 1e-82
 Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 15/197 (7%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
           VQ  I+   ++ +++ +    +G             +        G+ +      KV +Y
Sbjct: 312 VQEGIRDALMERLLDISRKVAFG-------------DPLNERTKIGAMISEAHAEKVHSY 358

Query: 228 IKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDE 286
           + +G+  G +L  GG+R G + G +  PTVF+ VT D  IAREEIFGPV + + FKT DE
Sbjct: 359 VTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADE 418

Query: 287 VIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGR 346
            +  AN T++GL++ + +TN++TA      I AG  WIN      P+ P GG+K+SG+GR
Sbjct: 419 AVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGR 478

Query: 347 ELGKAALDEYTELKTVT 363
           ELG+   DEY++ K V 
Sbjct: 479 ELGRYGFDEYSQFKGVH 495

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  250 bits (640), Expect = 6e-76
 Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 1/147 (0%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  VQE I D  +++ ++ +     GDP ++  + G  +      KV +Y+ +G+  G 
Sbjct: 308 SRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGA 367

Query: 131 KLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
           +L  GG+R G + G +  PTVF+ VT D  IAREEIFGPV + + FKT DE +  AN T+
Sbjct: 368 ELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATE 427

Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
           +GL++ + +TN++TA      I AG  
Sbjct: 428 FGLSASVWSTNLETALQTIRRIRAGRC 454

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  108 bits (272), Expect = 4e-25
 Identities = 22/53 (41%), Positives = 36/53 (67%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           + + +   A+ +GC V+LKP+E T  T++ +A L ++AG PDGV +V+ GYG 
Sbjct: 177 IASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGD 229

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  361 bits (929), Expect = e-119
 Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 23/247 (9%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD-------MAYYY-----CFVCAGS 418
           T   I++  A S++KR  +ELGGK+P+++  DAD++          YY     C   A  
Sbjct: 249 TGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDC--TAAC 305

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG- 477
           R Y Q+ IYDT V+K     A  K G P D+S + GP        +V   ++     G  
Sbjct: 306 RIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHI 365

Query: 478 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
           K+  GG+++   GY+  PT+ +    D  I ++E+FGPV ++  F   ++V+  AND++Y
Sbjct: 366 KVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQY 425

Query: 538 GLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEY 590
           GLAS + T ++  A+  +  +  G         +V + P GG K SG G+++    L++Y
Sbjct: 426 GLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDY 485

Query: 591 TELKTVT 597
           T ++ V 
Sbjct: 486 TVVRHVM 492

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  259 bits (665), Expect = 6e-80
 Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 15/197 (7%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
            Q  I    ++++       K G                  +   G         +V   
Sbjct: 309 AQKGIYDTLVEKLGAAVATLKSG-------------APDDESTELGPLSSLAHLERVGKA 355

Query: 228 IKSGVEQGG-KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDE 286
           ++     G  K+  GG+++   GY+  PT+ +    D  I ++E+FGPV ++  F   ++
Sbjct: 356 VEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ 415

Query: 287 VIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGR 346
           V+  AND++YGLAS + T ++  A+  +  +  G  W+N +  +V + P GG K SG G+
Sbjct: 416 VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGK 475

Query: 347 ELGKAALDEYTELKTVT 363
           ++    L++YT ++ V 
Sbjct: 476 DMSLYGLEDYTVVRHVM 492

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  243 bits (624), Expect = 6e-74
 Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 1/147 (0%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            R Y Q+ IYDT V+K     A  K G P D+S + GP        +V   ++     G 
Sbjct: 305 CRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGH 364

Query: 131 -KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
            K+  GG+++   GY+  PT+ +    D  I ++E+FGPV ++  F   ++V+  AND++
Sbjct: 365 IKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQ 424

Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
           YGLAS + T ++  A+  +  +  G  
Sbjct: 425 YGLASSVWTKDVGRAHRVSARLQYGCT 451

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score = 98.0 bits (245), Expect = 8e-22
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M AWK  PALAAG  V+LKP+E TPLTAL +A L +   FP GV+++L G G 
Sbjct: 175 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGK 226

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  360 bits (926), Expect = e-118
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 23/247 (9%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA-------YYY-----CFVCAGS 418
           T   ++AAAA   +KR  LELGGK+P+++  DAD++          YY     C   A  
Sbjct: 251 TGKKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDC--TAAC 307

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG- 477
           R Y +  IY+  V       +  +     D   + GP +      +V ++++   +Q   
Sbjct: 308 RIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHI 367

Query: 478 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
           ++  GG+   D+G+F +PTV +  T + +I R E+FGPV ++ +F   D+ +  AND+ Y
Sbjct: 368 EITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDY 427

Query: 538 GLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEY 590
           GLAS + T +I  A   A  +  G         +  + P GG K+SG G+++   AL++Y
Sbjct: 428 GLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDY 487

Query: 591 TELKTVT 597
           T ++ + 
Sbjct: 488 TAVRHIM 494

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  259 bits (664), Expect = 1e-79
 Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 15/197 (7%)

Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
            +  I  K + ++    +  +Y                       G  +      +V ++
Sbjct: 311 AEAGIYEKLVADLTSAVSTIRYN-------------LDDDTENEIGPLISRRQRDRVASF 357

Query: 228 IKSGVEQGG-KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDE 286
           ++   +Q   ++  GG+   D+G+F +PTV +  T + +I R E+FGPV ++ +F   D+
Sbjct: 358 VERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDD 417

Query: 287 VIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGR 346
            +  AND+ YGLAS + T +I  A   A  +  G  WIN +  +  + P GG K+SG G+
Sbjct: 418 AVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGK 477

Query: 347 ELGKAALDEYTELKTVT 363
           ++   AL++YT ++ + 
Sbjct: 478 DMSVYALEDYTAVRHIM 494

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  243 bits (624), Expect = 6e-74
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            R Y +  IY+  V       +  +     D   + GP +      +V ++++   +Q  
Sbjct: 307 CRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKH 366

Query: 131 -KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
            ++  GG+   D+G+F +PTV +  T + +I R E+FGPV ++ +F   D+ +  AND+ 
Sbjct: 367 IEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSD 426

Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
           YGLAS + T +I  A   A  +  G  
Sbjct: 427 YGLASSVWTKDISKAMRAASRLQYGCT 453

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score = 98.4 bits (246), Expect = 7e-22
 Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M+AWK  PA+  G  V+ KP+EQTPLTAL +A L      P+GV++V+ G G 
Sbjct: 177 MMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGE 228

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  353 bits (909), Expect = e-116
 Identities = 101/254 (39%), Positives = 140/254 (55%), Gaps = 31/254 (12%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA-------YYY-----CFVCAGS 418
           T   +M  AA  +LKR+S ELGGKSP ++ ADAD++ A        +      C   A S
Sbjct: 253 TGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERC--TASS 309

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
           R  V+E I++ FV K VE+A A +VG P D   + GP +  E   +VL Y+++G  +G +
Sbjct: 310 RLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGAR 369

Query: 479 LEAGGKRKG--------DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIE 530
           L  GG+R           +G ++ PTVF    +  KIA+EEIFGPV   I FK  +E + 
Sbjct: 370 LLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALR 428

Query: 531 RANDTKYGLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELG 583
           +ANDTKYGLA+ + T +++ A+  A  + AG              PFGG K SG  RE G
Sbjct: 429 KANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGG 488

Query: 584 KAALDEYTELKTVT 597
             ALD YT+LKT+ 
Sbjct: 489 TYALDFYTDLKTIA 502

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  251 bits (643), Expect = 2e-76
 Identities = 63/156 (40%), Positives = 91/156 (58%), Gaps = 9/156 (5%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--------DKGYFIEPTVFSNVTDDFKIA 267
           +  E   +VL Y+++G  +G +L  GG+R           +G ++ PTVF    +  KIA
Sbjct: 348 IHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIA 406

Query: 268 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY 327
           +EEIFGPV   I FK  +E + +ANDTKYGLA+ + T +++ A+  A  + AG V++N +
Sbjct: 407 QEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSH 466

Query: 328 QAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
                  PFGG K SG  RE G  ALD YT+LKT+ 
Sbjct: 467 NVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIA 502

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  239 bits (611), Expect = 7e-72
 Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 9/154 (5%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V+E I++ FV K VE+A A +VG P D   + GP +      +VL Y+++G  +G 
Sbjct: 309 SRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGA 368

Query: 131 KLEAGGKRKG--------DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVI 182
           +L  GG+R           +G ++ PTVF    +  KIA+EEIFGPV   I FK  +E +
Sbjct: 369 RLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEAL 427

Query: 183 ERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
            +ANDTKYGLA+ + T +++ A+  A  + AG V
Sbjct: 428 RKANDTKYGLAAYVFTRDLERAHRLALELEAGMV 461

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  105 bits (265), Expect = 3e-24
 Identities = 22/53 (41%), Positives = 34/53 (64%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           +  W+  PALA G  V+LKPAE +P TA  +A + ++A  P GV +++ G+G 
Sbjct: 178 LSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGE 230

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  338 bits (868), Expect = e-109
 Identities = 84/255 (32%), Positives = 132/255 (51%), Gaps = 30/255 (11%)

Query: 371 TSHSIMAAAAA-----SNLKRVSLELGGKSPLVICADADVDMA--------YYY----CF 413
               +   AA      ++LKRV +E+GGK  +V+  DAD+D+A        + +    C 
Sbjct: 263 VGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKC- 321

Query: 414 VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGV 473
             AGSR  + +D+YD  ++K V  A    VGDP ++    GP +D + F K+++YI+ G 
Sbjct: 322 -SAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGK 380

Query: 474 EQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 533
           ++G +L  GG+     G+FI+PT+ +++  +  I +EEIFGPV    K    D  +E AN
Sbjct: 381 KEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIAN 439

Query: 534 DTKYGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIG-RELG 583
           +T+YGL   ++T N           + G+         A+V   PFGGFK SG   +  G
Sbjct: 440 NTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGG 499

Query: 584 KAALDEYTELKTVTE 598
              L  + + KTV+E
Sbjct: 500 PDYLALHMQAKTVSE 514

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  239 bits (611), Expect = 1e-71
 Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 6/164 (3%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +D + F K+++YI+ G ++G +L  GG+     G+FI+PT+ +++  +  I +EEIFGPV
Sbjct: 364 IDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPV 422

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQ 333
               K    D  +E AN+T+YGL   ++T N           + G+++ N  C  A+V  
Sbjct: 423 VAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGY 482

Query: 334 APFGGFKESGIG-RELGKAALDEYTELKTVTE--SPLRSYTSHS 374
            PFGGFK SG   +  G   L  + + KTV+E  +    + SH 
Sbjct: 483 HPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMYAENLYFQSHH 526

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  235 bits (603), Expect = 2e-70
 Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 1/146 (0%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  + +D+YD  ++K V  A    VGDP ++    GP +D   F K+++YI+ G ++G 
Sbjct: 325 SRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG- 383

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           +L  GG+     G+FI+PT+ +++  +  I +EEIFGPV    K    D  +E AN+T+Y
Sbjct: 384 RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEY 443

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL   ++T N           + G++
Sbjct: 444 GLTGAVITRNRAHIEQAKREFHVGNL 469

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score = 98.4 bits (246), Expect = 7e-22
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           ++       +  G  V+LKPA  TP+ A     + + AG P GVI+ +PG G 
Sbjct: 188 IMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGA 240

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  333 bits (856), Expect = e-108
 Identities = 93/240 (38%), Positives = 136/240 (56%), Gaps = 19/240 (7%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCFV------CAGSRTYVQEDI 426
              AA + K+VSLELGGKSP ++  D D                     AG+R  V   I
Sbjct: 235 MEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKI 294

Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
            D F+ +  E+ +  +VG+P +   Q GP +  + F +V NYI  G+E+G +L  GG  K
Sbjct: 295 KDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGK 354

Query: 487 G---DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
               +KGYF  PT+F NV +   IA+EEIFGPV ++I +  LDE I+ ANDTKYGLA  +
Sbjct: 355 PEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYV 414

Query: 544 VTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           +  + +T +  A +I AG+  +      P  PFGG+K+SG+GRE G   ++E+ E+K++ 
Sbjct: 415 IGKDKETLHKVARSIEAGTVEINEAGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  238 bits (609), Expect = 6e-72
 Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 4/151 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFKIAREEIF 272
           +  + F +V NYI  G+E+G +L  GG  K    +KGYF  PT+F NV +   IA+EEIF
Sbjct: 325 ISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIF 384

Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
           GPV ++I +  LDE I+ ANDTKYGLA  ++  + +T +  A +I AG+V IN      P
Sbjct: 385 GPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKP 443

Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTVT 363
             PFGG+K+SG+GRE G   ++E+ E+K++ 
Sbjct: 444 DLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  223 bits (570), Expect = 3e-66
 Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 7/159 (4%)

Query: 62  SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
            C +     +R  V   I D F+ +  E+ +  +VG+P +   Q GP +    F +V NY
Sbjct: 281 VCTAG----TRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNY 336

Query: 122 IKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 178
           I  G+E+G +L  GG  K    +KGYF  PT+F NV +   IA+EEIFGPV ++I +  L
Sbjct: 337 INKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396

Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVD 217
           DE I+ ANDTKYGLA  ++  + +T +  A +I AG+V+
Sbjct: 397 DEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVE 435

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score = 95.7 bits (239), Expect = 5e-21
 Identities = 21/53 (39%), Positives = 32/53 (60%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
             + K   A AAG PV+LKP+E+TP  A+ +A +  + G P GV +++ G G 
Sbjct: 155 QTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGA 207

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  331 bits (850), Expect = e-107
 Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 18/239 (7%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADAD---VDMAYYYCFV------CAGSRTYVQEDIY 427
           +  A++ LKRV LELGGK   +I ADAD   +     +CF        A +R  V++ IY
Sbjct: 257 SKNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCFYNSGQSCNAPTRMLVEQAIY 316

Query: 428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG 487
           D  +K A + A   +VG         GP V  E + K+ + I+SG+++G  L  GG    
Sbjct: 317 DKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLP 376

Query: 488 ---DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              ++GY++ PTVF++V    +I REEIFGPV +++ F T DE +  ANDT+YGL + I 
Sbjct: 377 MGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQ 436

Query: 545 TTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           + +       A  + +G   V        + FGG K SG  RE G   + E+ + K ++
Sbjct: 437 SQDRSKCRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  237 bits (606), Expect = 2e-71
 Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 4/151 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFKIAREEIF 272
           V  E + K+ + I+SG+++G  L  GG       ++GY++ PTVF++V    +I REEIF
Sbjct: 346 VSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIF 405

Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
           GPV +++ F T DE +  ANDT+YGL + I + +       A  + +G V +N +  +  
Sbjct: 406 GPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGH-ELPG 464

Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTVT 363
            + FGG K SG  RE G   + E+ + K ++
Sbjct: 465 GSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  221 bits (565), Expect = 2e-65
 Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 7/159 (4%)

Query: 62  SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
           SC +P    +R  V++ IYD  +K A + A   +VG         GP V    + K+ + 
Sbjct: 302 SCNAP----TRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDL 357

Query: 122 IKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 178
           I+SG+++G  L  GG       ++GY++ PTVF++V    +I REEIFGPV +++ F T 
Sbjct: 358 IQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTE 417

Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVD 217
           DE +  ANDT+YGL + I + +       A  + +G V+
Sbjct: 418 DEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVE 456

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score = 95.7 bits (239), Expect = 5e-21
 Identities = 21/53 (39%), Positives = 32/53 (60%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
            +  K  PAL AGC ++LKP+E  PL+A+  A +  +A  P GV +++ G G 
Sbjct: 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGA 229

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  329 bits (846), Expect = e-107
 Identities = 89/239 (37%), Positives = 123/239 (51%), Gaps = 18/239 (7%)

Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCF-----VC-AGSRTYVQEDI 426
              AA  LK  +LELGGKS  +I  D D+  A     +         C   +R       
Sbjct: 241 GRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSR 300

Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
           YD  V        A  VG P D + Q GP +  +  T+V  YI  G+E+G +L  GG R 
Sbjct: 301 YDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRP 360

Query: 487 G--DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              D G+FI+PTVF++V +   IA+EEIFGPV  II + T ++ I  AND+ YGLA  + 
Sbjct: 361 EGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVW 420

Query: 545 TTNIDTANTFAHAINAGS------AVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
           TT++      +  I  G+      A  P +PFGG+K SGIGRE G   ++ +T+ K+V 
Sbjct: 421 TTDVPKGIKISQQIRTGTYGINWYAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  237 bits (606), Expect = 3e-71
 Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 7/164 (4%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDFKIAREEIFG 273
           +  +  T+V  YI  G+E+G +L  GG R    D G+FI+PTVF++V +   IA+EEIFG
Sbjct: 331 ISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFG 390

Query: 274 PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ 333
           PV  II + T ++ I  AND+ YGLA  + TT++      +  I  G+  IN Y A  P 
Sbjct: 391 PVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWY-AFDPG 449

Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVT----ESPLRSYTSH 373
           +PFGG+K SGIGRE G   ++ +T+ K+V      +   S+  H
Sbjct: 450 SPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMGYTVAGSHHHH 493

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  218 bits (559), Expect = 1e-64
 Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 6/157 (3%)

Query: 62  SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
            C++     +R       YD  V        A  VG P D + Q GP +     T+V  Y
Sbjct: 287 GCVNQ----TRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGY 342

Query: 122 IKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 179
           I  G+E+G +L  GG R    D G+FI+PTVF++V +   IA+EEIFGPV  II + T +
Sbjct: 343 IAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEE 402

Query: 180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
           + I  AND+ YGLA  + TT++      +  I  G+ 
Sbjct: 403 DAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTY 439

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score = 91.4 bits (228), Expect = 1e-19
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           +   K  PAL AGC ++LKPA +TPLTA  +A +  + G P+GV+SV+PG
Sbjct: 162 LAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG 211

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  314 bits (807), Expect = e-100
 Identities = 87/255 (34%), Positives = 128/255 (50%), Gaps = 31/255 (12%)

Query: 371 TSHSIMAAAA-----ASNLKRVSLELGGKSPLVICADADVDMA--------YYY----CF 413
               I  AA       +  KR  +E GGK+ +++   AD D+A        Y +    C 
Sbjct: 264 VGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKC- 322

Query: 414 VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGV 473
             A SR  + +  Y+  +++ +++A    VG P +++   GP V AE   KVL+YI+ G 
Sbjct: 323 -SAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGK 380

Query: 474 EQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 533
            +G +L  GGKR   +GYFI PTVF+ V    +IA+EEIFGPV ++I+ K   E +E AN
Sbjct: 381 NEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVAN 439

Query: 534 DTKYGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIGRELGK 584
           DT YGL  G+ +   +         + G+         A+V   PFGGFK SG   + G 
Sbjct: 440 DTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGA 499

Query: 585 -AALDEYTELKTVTE 598
              L  + E+K V E
Sbjct: 500 LDYLRLFLEMKAVAE 514

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  228 bits (583), Expect = 8e-68
 Identities = 63/152 (41%), Positives = 86/152 (56%), Gaps = 4/152 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           V AE   KVL+YI+ G  +G +L  GGKR   +GYFI PTVF+ V    +IA+EEIFGPV
Sbjct: 364 VSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPV 422

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQ 333
            ++I+ K   E +E ANDT YGL  G+ +   +         + G+++ N     A+V  
Sbjct: 423 LSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGV 482

Query: 334 APFGGFKESGIGRELGK-AALDEYTELKTVTE 364
            PFGGFK SG   + G    L  + E+K V E
Sbjct: 483 QPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  217 bits (555), Expect = 1e-63
 Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 2/146 (1%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  + +  Y+  +++ +++A    VG P +++   GP V A    KVL+YI+ G  +G 
Sbjct: 326 SRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG- 383

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           +L  GGKR   +GYFI PTVF+ V    +IA+EEIFGPV ++I+ K   E +E ANDT Y
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPY 443

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL  G+ +   +         + G++
Sbjct: 444 GLTGGVYSRKREHLEWARREFHVGNL 469

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score = 98.8 bits (247), Expect = 5e-22
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           +        +A G  V+ KPAE   +    V  +  +AGFP GV++ LPG G 
Sbjct: 189 IFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGE 241

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  306 bits (785), Expect = 2e-97
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 26/244 (10%)

Query: 375 IM-AAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYY----CFVCAGSRTY 421
           +   A     +K V+LELGG +P V+ ADAD+D A        + +    C   + +R  
Sbjct: 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQIC--MSINRVI 301

Query: 422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
           V   ++D F++K VE       GDP  +    GP ++    + +   I+   ++G  ++ 
Sbjct: 302 VDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQV 361

Query: 482 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
            G  +G     + P VFS+VT D +IAREEIFGP+ +++K        E AN + +GL++
Sbjct: 362 EGPIEG---RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSA 418

Query: 542 GIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTEL 593
            + + +ID A  FA  I++G   +        P   FGG K SG+GR  G  A++E+T  
Sbjct: 419 AVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTD 478

Query: 594 KTVT 597
           + + 
Sbjct: 479 RWIG 482

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  214 bits (547), Expect = 1e-62
 Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 4/149 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           ++    + +   I+   ++G  ++  G  +G     + P VFS+VT D +IAREEIFGP+
Sbjct: 337 INDSQLSGLKEKIELAKKEGATVQVEGPIEG---RLVHPHVFSDVTSDMEIAREEIFGPL 393

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-AVVPQA 334
            +++K        E AN + +GL++ + + +ID A  FA  I++G V IN       P  
Sbjct: 394 ISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHV 453

Query: 335 PFGGFKESGIGRELGKAALDEYTELKTVT 363
            FGG K SG+GR  G  A++E+T  + + 
Sbjct: 454 MFGGSKNSGLGRFNGDWAIEEFTTDRWIG 482

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  206 bits (526), Expect = 1e-59
 Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 3/146 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           +R  V   ++D F++K VE       GDP  +    GP ++    + +   I+   ++G 
Sbjct: 298 NRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGA 357

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            ++  G  +G     + P VFS+VT D +IAREEIFGP+ +++K        E AN + +
Sbjct: 358 TVQVEGPIEG---RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDF 414

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL++ + + +ID A  FA  I++G V
Sbjct: 415 GLSAAVWSKDIDRAAQFALQIDSGMV 440

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score = 92.3 bits (230), Expect = 6e-20
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAA-LTQQAGFPDGVISVLPGYGP 53
           +      PALA G  V++KPA  TP+T   + A + ++AG P GVIS + G G 
Sbjct: 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGS 217

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  285 bits (733), Expect = 8e-90
 Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 30/246 (12%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYY----CFVCAGSRTYV 422
           ++       +K+  +ELGG  P ++  DAD+D+A        Y Y    C   A      
Sbjct: 251 VVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRC--DAIKLVLA 305

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           +  +Y   V++  ++ ++ +VGDP D +V  GP +      +++  I+  VE+GG++ AG
Sbjct: 306 ERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAG 365

Query: 483 GKRKGDKGYFIEPTVF---SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 539
           G+R G    +++PT     ++   D  + + E+F PV   ++ K LD+ IE AN   YGL
Sbjct: 366 GRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGL 423

Query: 540 ASGIVTTNIDTANTFAHA-------INAGSAV-VPQAPFGGFKESGIGRELGKAALDEYT 591
            + +   ++                IN      +   PFGG K+SG+ RE    A++  T
Sbjct: 424 DAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVT 483

Query: 592 ELKTVT 597
             KT+ 
Sbjct: 484 AYKTIV 489

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  200 bits (510), Expect = 2e-57
 Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 6/152 (3%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF---SNVTDDFKIAREEIF 272
           +      +++  I+  VE+GG++ AGG+R G    +++PT     ++   D  + + E+F
Sbjct: 340 ISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTFVEAPADRVKDMVLYKREVF 397

Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-V 331
            PV   ++ K LD+ IE AN   YGL + +   ++         +  G+++IN      +
Sbjct: 398 APVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGI 457

Query: 332 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
              PFGG K+SG+ RE    A++  T  KT+ 
Sbjct: 458 GYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  192 bits (489), Expect = 2e-54
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 5/149 (3%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
                +  +Y   V++  ++ ++ +VGDP D +V  GP +      +++  I+  VE+GG
Sbjct: 301 KLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGG 360

Query: 131 KLEAGGKRKGDKGYFIEPTVF---SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
           ++ AGG+R G    +++PT     ++   D  + + E+F PV   ++ K LD+ IE AN 
Sbjct: 361 RVLAGGRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANG 418

Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
             YGL + +   ++         +  G++
Sbjct: 419 RPYGLDAAVFGRDVVKIRRAVRLLEVGAI 447

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score = 99.6 bits (249), Expect = 3e-22
 Identities = 15/57 (26%), Positives = 22/57 (38%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP 57
               K   +   G  V++KP+   PL A         AGFP   I++L   G  +  
Sbjct: 173 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK 229

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  279 bits (716), Expect = 2e-87
 Identities = 73/242 (30%), Positives = 105/242 (43%), Gaps = 29/242 (11%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYY----CFVCAGSRTYV 422
           I   A    +  V LELGGK P ++  DAD+ +         + Y    C      R +V
Sbjct: 247 ISEKA---KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRC-TAI-KRVFV 301

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           Q+ + D  V    E      VG P D      P +D +    +   I   +E G  L +G
Sbjct: 302 QDSVADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSG 360

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
            KR+G     + PT+  +VT   ++A EE FGPV  II+ K  +E I  +N + YGL + 
Sbjct: 361 NKRQG---NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQAS 417

Query: 543 IVTTNIDTANTFAHA-------INAGSAVVP-QAPFGGFKESGIGRELGKAALDEYTELK 594
           I T + D A             INA +   P   PF G K+SG+G +  K +L   T  +
Sbjct: 418 IFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRER 477

Query: 595 TV 596
             
Sbjct: 478 VT 479

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  200 bits (511), Expect = 2e-57
 Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 4/148 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +D +    +   I   +E G  L +G KR+G     + PT+  +VT   ++A EE FGPV
Sbjct: 335 IDEKSAAFIQGLIDDALENGATLLSGNKRQG---NLLSPTLLDDVTPAMRVAWEEPFGPV 391

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP-QA 334
             II+ K  +E I  +N + YGL + I T + D A      +  G+V IN      P   
Sbjct: 392 LPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHF 451

Query: 335 PFGGFKESGIGRELGKAALDEYTELKTV 362
           PF G K+SG+G +  K +L   T  +  
Sbjct: 452 PFLGVKKSGLGVQGIKPSLLSMTRERVT 479

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  190 bits (485), Expect = 9e-54
 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 4/146 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            R +VQ+ + D  V    E      VG P D      P +D      +   I   +E G 
Sbjct: 297 KRVFVQDSVADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGA 355

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            L +G KR+G     + PT+  +VT   ++A EE FGPV  II+ K  +E I  +N + Y
Sbjct: 356 TLLSGNKRQG---NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDY 412

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL + I T + D A      +  G+V
Sbjct: 413 GLQASIFTKDTDRAINIGKHLEVGTV 438

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score = 96.1 bits (240), Expect = 3e-21
 Identities = 20/53 (37%), Positives = 28/53 (52%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           + A K  PAL  G  V+ KPA Q  L+ + +      AG P+G+I V+ G G 
Sbjct: 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGS 220

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  277 bits (710), Expect = 1e-86
 Identities = 80/241 (33%), Positives = 119/241 (49%), Gaps = 26/241 (10%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQE 424
           I   A     K+++LELGG +P ++  DAD++ A              VC +     V E
Sbjct: 229 ITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDE 285

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I D F++  V KA    VG+P D+    GP +  E    V   ++  +++GGKL  GGK
Sbjct: 286 SIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK 345

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
           R         PT+   V  D  + + E F PV  II+    +E+I+ AN T+YGL S I 
Sbjct: 346 R---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIF 400

Query: 545 TTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
           T +I+ +  FA  +  G  V+           PFGG K+SG+GRE  K A++E + +KT+
Sbjct: 401 TNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTI 460

Query: 597 T 597
            
Sbjct: 461 I 461

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  193 bits (492), Expect = 5e-55
 Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 6/149 (4%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +  E    V   ++  +++GGKL  GGKR         PT+   V  D  + + E F PV
Sbjct: 318 ISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK---ALFYPTIL-EVDRDNILCKTETFAPV 373

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQA 334
             II+    +E+I+ AN T+YGL S I T +I+ +  FA  +  G V IN          
Sbjct: 374 IPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNM 432

Query: 335 PFGGFKESGIGRELGKAALDEYTELKTVT 363
           PFGG K+SG+GRE  K A++E + +KT+ 
Sbjct: 433 PFGGVKKSGLGREGVKYAMEEMSNIKTII 461

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  184 bits (470), Expect = 6e-52
 Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 5/146 (3%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
               V E I D F++  V KA    VG+P D+    GP +       V   ++  +++GG
Sbjct: 279 GMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGG 338

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           KL  GGKR         PT+   V  D  + + E F PV  II+    +E+I+ AN T+Y
Sbjct: 339 KLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEY 393

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL S I T +I+ +  FA  +  G V
Sbjct: 394 GLHSAIFTNDINKSLKFAENLEFGGV 419

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score = 92.2 bits (230), Expect = 6e-20
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGP 53
           + A K  PA+A G  ++  P+ + PL  + +A + + A      P GV ++L G G 
Sbjct: 146 LSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGE 202

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  268 bits (687), Expect = 3e-83
 Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 21/250 (8%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRT 420
           T + + +       K ++LE+GG +PLV+   AD+D A Y             C    R 
Sbjct: 229 TGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRL 288

Query: 421 YVQEDIY-DTFVKKAVEKAAARKVGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
            V +  + D  + + V  +A  +VG      +   G  +       +L   +  + +G +
Sbjct: 289 LVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQ 348

Query: 479 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
                 +  D    + P +  +V+   +   EE FGP+  +I++      I  AN T+YG
Sbjct: 349 PLLAMTQPIDGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYG 407

Query: 539 LASGIVTTNIDTANTFAHAINAG--------SAVVPQAPFGGFKESGIGRELGKAALDEY 590
           LA+G+++ + +    F     AG        +     APFGG   SG  R     A D  
Sbjct: 408 LAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYC 467

Query: 591 TELKTVTESP 600
                  ESP
Sbjct: 468 AYPVASLESP 477

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  192 bits (490), Expect = 1e-54
 Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 2/152 (1%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +       +L   +  + +G +      +  D    + P +  +V+   +   EE FGP+
Sbjct: 327 ISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGIL-DVSAVAERPDEEFFGPL 385

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVV-PQA 334
             +I++      I  AN T+YGLA+G+++ + +    F     AG V  N         A
Sbjct: 386 LQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSA 445

Query: 335 PFGGFKESGIGRELGKAALDEYTELKTVTESP 366
           PFGG   SG  R     A D         ESP
Sbjct: 446 PFGGIGASGNHRPSAYYAADYCAYPVASLESP 477

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  178 bits (454), Expect = 1e-49
 Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 3/148 (2%)

Query: 71  SRTYVQEDIY-DTFVKKAVEKAAARKVGDPF-DKSVQQGPQVDAVMFTKVLNYIKSGVEQ 128
            R  V +  + D  + + V  +A  +VG      +   G  +       +L   +  + +
Sbjct: 286 RRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGK 345

Query: 129 GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
           G +      +  D    + P +  +V+   +   EE FGP+  +I++      I  AN T
Sbjct: 346 GAQPLLAMTQPIDGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANAT 404

Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
           +YGLA+G+++ + +    F     AG V
Sbjct: 405 QYGLAAGLLSDSRERFEQFLVESRAGIV 432

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score = 91.1 bits (227), Expect = 1e-19
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           +      PAL AG  V+ KP+E TP  A        QAG P GV++++ G
Sbjct: 155 LPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG 204

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  268 bits (687), Expect = 9e-83
 Identities = 50/280 (17%), Positives = 96/280 (34%), Gaps = 50/280 (17%)

Query: 371 TSHSIMAAAAAS-NLKRVSLELGGKSPLVICADADVDMAYYYCFV--------------- 414
           T+ ++ A  A      R++++    +  ++CADA  D   +  F+               
Sbjct: 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKC 299

Query: 415 CAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVE 474
            A  R +V E   +  ++    K A   VG+P + +V+ G  V  E +  VL  I +  E
Sbjct: 300 TAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALRE 359

Query: 475 QGGKLEAGGKRK-----GDKGYFIEPTVF--SNVTDDFKIAREEIFGPVQTIIKFKTLD- 526
           +                 +    + P +F  ++  +   +   E+FGPV ++  ++    
Sbjct: 360 EAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD 419

Query: 527 -------EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS----------------- 562
                    +  A   +  L + I + +       A  +                     
Sbjct: 420 TNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGH 479

Query: 563 -AVVPQAPFGGFKESGIGREL-GKAALDEYTELKTVTESP 600
             V+P +  GG   +G G EL G  AL  Y     +  + 
Sbjct: 480 GNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS 519

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  187 bits (476), Expect = 2e-52
 Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 27/178 (15%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRK-----GDKGYFIEPTVF--SNVTDDFKIAR 268
           V  E +  VL  I +  E+                 +    + P +F  ++  +   +  
Sbjct: 342 VSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHD 401

Query: 269 EEIFGPVQTIIKFKTLD--------EVIERANDTKYGLASGIVTTNIDTANTFAHAINAG 320
            E+FGPV ++  ++             +  A   +  L + I + +       A  +   
Sbjct: 402 VEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADS 461

Query: 321 SVWINCYQA-----------VVPQAPFGGFKESGIGREL-GKAALDEYTELKTVTESP 366
              ++               V+P +  GG   +G G EL G  AL  Y     +  + 
Sbjct: 462 HGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS 519

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  176 bits (449), Expect = 1e-48
 Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 15/161 (9%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            R +V E   +  ++    K A   VG+P + +V+ G  V    +  VL  I +  E+  
Sbjct: 303 RRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAV 362

Query: 131 KLEAGGKRK-----GDKGYFIEPTVF--SNVTDDFKIAREEIFGPVQTIIKFKTLD---- 179
                          +    + P +F  ++  +   +   E+FGPV ++  ++       
Sbjct: 363 LAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNA 422

Query: 180 ----EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
                 +  A   +  L + I + +       A  +     
Sbjct: 423 LPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHG 463

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score = 86.2 bits (214), Expect = 5e-18
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPGYG 52
            L  K  PAL +G PV++KPA  T      + A    AG  P G +S++ G  
Sbjct: 167 GLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSS 219

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  263 bits (675), Expect = 1e-81
 Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 29/243 (11%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYY----CFVCAGSRTYV 422
           I   A    ++ + LELGGK   ++  DAD+++         + Y    C      R  V
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRC-TAV-KRVLV 292

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
            E + D  V+K  EK  A  +G+P D      P +D +    V   I    ++G      
Sbjct: 293 MESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTE 351

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
            KR+G     I P +F  VT D ++A EE FGPV  II+  +++E IE +N ++YGL + 
Sbjct: 352 IKREG---NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQAS 408

Query: 543 IVTTNIDTANTFAHA-------INAGSAV-VPQAPFGGFKESGIGRELGKAALDEYTELK 594
           I T +   A   A         IN  +       PF G K+SG G +  K +++  T +K
Sbjct: 409 IFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVK 468

Query: 595 TVT 597
           +V 
Sbjct: 469 SVV 471

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  186 bits (475), Expect = 1e-52
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           I+  S D      V   I    ++G       KR+G     I P +F  VT D ++A EE
Sbjct: 326 IDTKSAD-----YVEGLINDANDKGATALTEIKREG---NLICPILFDKVTTDMRLAWEE 377

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
            FGPV  II+  +++E IE +N ++YGL + I T +   A   A  +  G+V IN     
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQR 437

Query: 331 -VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
                PF G K+SG G +  K +++  T +K+V 
Sbjct: 438 GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  177 bits (452), Expect = 2e-49
 Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 4/146 (2%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            R  V E + D  V+K  EK  A  +G+P D      P +D      V   I    ++G 
Sbjct: 288 KRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGA 346

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
                 KR+G     I P +F  VT D ++A EE FGPV  II+  +++E IE +N ++Y
Sbjct: 347 TALTEIKREG---NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEY 403

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL + I T +   A   A  +  G+V
Sbjct: 404 GLQASIFTNDFPRAFGIAEQLEVGTV 429

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score = 91.1 bits (227), Expect = 1e-19
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           +   K  PAL AG  +  KP  Q  ++ L +A    +AG P GV + + G G 
Sbjct: 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGS 211

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  264 bits (677), Expect = 1e-81
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 20/243 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCA----------GSRTYVQE 424
            +         R  LELGG + ++   DAD+ +        A            R ++ E
Sbjct: 254 QVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHE 313

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
            I+D  V +  +  A  +VG+P+D +V  GP    +  +  L  ++   ++GG +  GGK
Sbjct: 314 SIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGK 373

Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
                G ++EPT+ + +  D  IA  E F P+  + KF+  +EV    N+ K GL+S I 
Sbjct: 374 VMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIF 433

Query: 545 TTNIDTANTFAHA---------INAG-SAVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
           T ++     +            +N   S       FGG K +G GRE G  A  +Y    
Sbjct: 434 TKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRS 493

Query: 595 TVT 597
           T T
Sbjct: 494 TCT 496

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  181 bits (461), Expect = 2e-50
 Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
            R ++ E I+D  V +  +  A  +VG+P+D +V  GP       +  L  ++   ++GG
Sbjct: 307 RRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGG 366

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            +  GGK     G ++EPT+ + +  D  IA  E F P+  + KF+  +EV    N+ K 
Sbjct: 367 TVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQ 426

Query: 191 GLASGIVTTNIDTANTFAHA---------INAGSVDAEM 220
           GL+S I T ++     +            +N  +  AE+
Sbjct: 427 GLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEI 465

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  180 bits (458), Expect = 4e-50
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 3/151 (1%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
              +  +  L  ++   ++GG +  GGK     G ++EPT+ + +  D  IA  E F P+
Sbjct: 346 HTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPI 405

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTF--AHAINAGSVWINCYQAVV-P 332
             + KF+  +EV    N+ K GL+S I T ++     +      + G V +N   +    
Sbjct: 406 LYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEI 465

Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTVT 363
              FGG K +G GRE G  A  +Y    T T
Sbjct: 466 GGAFGGEKHTGGGRESGSDAWKQYMRRSTCT 496

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score = 75.3 bits (186), Expect = 1e-14
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 4/54 (7%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPG 50
           +  W    A+  G   L K A  T L ++ V  +  +       P  + S+  G
Sbjct: 173 VYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG 226

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  262 bits (673), Expect = 3e-81
 Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 22/242 (9%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYV 422
            + A AA N+ +V LELGGK+P ++  DAD++      +          C  CA  R YV
Sbjct: 236 KIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVC-NCA-ERVYV 293

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDK-SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
           Q+ IYD FV +  E   A + G+P ++  +  GP ++A    +V   +   VE+G ++  
Sbjct: 294 QKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAF 353

Query: 482 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
           GGK    KGY+  PT+  +V  +  I  EE FGPV  ++ F TL++ I  AND+ YGL S
Sbjct: 354 GGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTS 413

Query: 542 GIVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
            I T N++ A             IN  +    Q    G+++SGIG   GK  L EY + +
Sbjct: 414 SIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQ 473

Query: 595 TV 596
            V
Sbjct: 474 VV 475

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  182 bits (465), Expect = 3e-51
 Identities = 53/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           INA +++     +V   +   VE+G ++  GGK    KGY+  PT+  +V  +  I  EE
Sbjct: 329 INAAALE-----RVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEE 383

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
            FGPV  ++ F TL++ I  AND+ YGL S I T N++ A      +  G  +IN     
Sbjct: 384 TFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE 443

Query: 331 VPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
             Q    G+++SGIG   GK  L EY + + V
Sbjct: 444 AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  175 bits (445), Expect = 2e-48
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDK-SVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           R YVQ+ IYD FV +  E   A + G+P ++  +  GP ++A    +V   +   VE+G 
Sbjct: 290 RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGA 349

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           ++  GGK    KGY+  PT+  +V  +  I  EE FGPV  ++ F TL++ I  AND+ Y
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GL S I T N++ A      +  G  
Sbjct: 410 GLTSSIYTQNLNVAMKAIKGLKFGET 435

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score = 91.1 bits (227), Expect = 1e-19
 Identities = 19/53 (35%), Positives = 31/53 (58%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           ++A K  PAL  G  +++KP+E TP  A+  A +  + G P GV +++ G G 
Sbjct: 158 LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGE 210

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  257 bits (658), Expect = 5e-79
 Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 26/251 (10%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYY----CFVCAGSRTYV 422
            +   A    KR++LELGG +P  + +DADVD A        + +    C +   +R  V
Sbjct: 238 HIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQIC-MII-NRIIV 295

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
            +D+YD FV+K   +      GD  D     GP ++     K L  I+     G +L   
Sbjct: 296 HQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVE 355

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           GKR G     + P VF    ++ KIA+ E+F P+ TIIK  +  E I+ ANDT+YGL+S 
Sbjct: 356 GKRVG---NVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSA 412

Query: 543 IVTTNIDTANTFAHA-------INAGS-AVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
           + T++++    FA         +N  S    P   FGG K SG+GR      ++E+T  K
Sbjct: 413 VFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTK 472

Query: 595 TVT-ESPLRSY 604
            ++ +   R Y
Sbjct: 473 WISIQKQYRKY 483

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  173 bits (440), Expect = 9e-48
 Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 12/163 (7%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           IN   ++     K L  I+     G +L   GKR G     + P VF    ++ KIA+ E
Sbjct: 330 INERQIE-----KALEIIEQAKTDGIELAVEGKRVG---NVLTPYVFVGADNNSKIAQTE 381

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
           +F P+ TIIK  +  E I+ ANDT+YGL+S + T++++    FA  I++G   +N  Q+V
Sbjct: 382 LFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVND-QSV 440

Query: 331 --VPQAPFGGFKESGIGRELGKAALDEYTELKTVT-ESPLRSY 370
              P   FGG K SG+GR      ++E+T  K ++ +   R Y
Sbjct: 441 NDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQYRKY 483

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  168 bits (429), Expect = 3e-46
 Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V +D+YD FV+K   +      GD  D     GP ++     K L  I+     G +
Sbjct: 292 RIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIE 351

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           L   GKR G     + P VF    ++ KIA+ E+F P+ TIIK  +  E I+ ANDT+YG
Sbjct: 352 LAVEGKRVG---NVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYG 408

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L+S + T++++    FA  I++G  
Sbjct: 409 LSSAVFTSDLEKGEKFALQIDSGMT 433

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score = 78.8 bits (195), Expect = 1e-15
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTA-LYVAALTQQAGFPDGVISVLPGYGP 53
           +      PA+A G  V+ KP  QT ++    +A   + AG P GV++V+     
Sbjct: 159 LSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVK 212

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  244 bits (626), Expect = 1e-74
 Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 17/240 (7%)

Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQ 423
           + + A A + LK+  LELGG  P ++  DAD+++A              VC A  R  V+
Sbjct: 218 AAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVE 277

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           E I   F  + V  AAA K+GDP  +    GP    ++  ++   +++ V +G +L  GG
Sbjct: 278 EGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGG 337

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           ++   +G +   TV ++VT D    R+E+FGPV  I   K     +  AND+++GL++ I
Sbjct: 338 EKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATI 397

Query: 544 VTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            T +   A   A         IN  SA   +  FGG K+SG GREL    L E+  ++TV
Sbjct: 398 FTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  170 bits (434), Expect = 5e-47
 Identities = 48/140 (34%), Positives = 77/140 (55%)

Query: 223 KVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 282
           ++   +++ V +G +L  GG++   +G +   TV ++VT D    R+E+FGPV  I   K
Sbjct: 318 ELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAK 377

Query: 283 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKES 342
                +  AND+++GL++ I T +   A   A  +  G V+IN Y A   +  FGG K+S
Sbjct: 378 DAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKS 437

Query: 343 GIGRELGKAALDEYTELKTV 362
           G GREL    L E+  ++TV
Sbjct: 438 GFGRELSHFGLHEFCNVQTV 457

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  163 bits (416), Expect = 1e-44
 Identities = 45/145 (31%), Positives = 73/145 (50%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V+E I   F  + V  AAA K+GDP  +    GP     +  ++   +++ V +G +
Sbjct: 273 RFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGAR 332

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           L  GG++   +G +   TV ++VT D    R+E+FGPV  I   K     +  AND+++G
Sbjct: 333 LLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFG 392

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L++ I T +   A   A  +  G V
Sbjct: 393 LSATIFTADDTLAAEMAARLECGGV 417

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score = 72.9 bits (180), Expect = 8e-14
 Identities = 15/50 (30%), Positives = 20/50 (40%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
            +     P L AG   LLK A      A  +A +  +AG P GV   +  
Sbjct: 142 QVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA 191

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  245 bits (627), Expect = 2e-74
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQ 423
           S +A AA  NLK+ ++ELGG    ++  DAD  +               VC +  R  V+
Sbjct: 215 SAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVE 274

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
           +  YD  + +     +  K GDP +      P    +   K+   +K  ++ G K+    
Sbjct: 275 KSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQY 334

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
                KG F  PT+ +++  D  +  +E+FGP+  +   +  +  I+ AND+ YGL S +
Sbjct: 335 PEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSV 394

Query: 544 VTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
           + ++ID A   +         IN       + PFGG K+SG GREL    L  +     V
Sbjct: 395 IGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLV 454

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  171 bits (436), Expect = 4e-47
 Identities = 42/140 (30%), Positives = 68/140 (48%)

Query: 223 KVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 282
           K+   +K  ++ G K+         KG F  PT+ +++  D  +  +E+FGP+  +   +
Sbjct: 315 KLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVE 374

Query: 283 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKES 342
             +  I+ AND+ YGL S ++ ++ID A   +  I  G   IN       + PFGG K+S
Sbjct: 375 DDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKS 434

Query: 343 GIGRELGKAALDEYTELKTV 362
           G GREL    L  +     V
Sbjct: 435 GYGRELSGLGLMAFVNEHLV 454

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  164 bits (417), Expect = 2e-44
 Identities = 36/145 (24%), Positives = 65/145 (44%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R  V++  YD  + +     +  K GDP +      P        K+   +K  ++ G K
Sbjct: 270 RIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAK 329

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           +         KG F  PT+ +++  D  +  +E+FGP+  +   +  +  I+ AND+ YG
Sbjct: 330 VFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYG 389

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           L S ++ ++ID A   +  I  G  
Sbjct: 390 LGSSVIGSDIDRAKKVSAQIETGMT 414

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score = 72.6 bits (179), Expect = 1e-13
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
            +   + P    G P+LLK A   P +A   A + ++AG P+G +  L  
Sbjct: 139 QVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYP 188

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  244 bits (625), Expect = 5e-74
 Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 25/246 (10%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYV 422
            +   +A  +  V LELGGK+P+V+  DAD+D      +   +      C  C   R YV
Sbjct: 242 QIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVC-TCV-ERLYV 299

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
              +YD F+ K +      KVGDP D   Q GP+ +      + + +   ++QG  +  G
Sbjct: 300 HASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATG 359

Query: 483 GKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
           GK       + G + EPTV  +V  D  +  EE FGP+  I+K  ++++ IE  ND+ YG
Sbjct: 360 GKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYG 419

Query: 539 LASGIVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYT 591
           L++ + T +    N            IN G     Q    G+K+SG G E GK  L++Y 
Sbjct: 420 LSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYL 479

Query: 592 ELKTVT 597
           E KTV 
Sbjct: 480 EKKTVY 485

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  161 bits (409), Expect = 2e-43
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 4/149 (2%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YV   +YD F+ K +      KVGDP D   Q GP+ +      + + +   ++QG  
Sbjct: 296 RLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGAT 355

Query: 132 LEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
           +  GGK       + G + EPTV  +V  D  +  EE FGP+  I+K  ++++ IE  ND
Sbjct: 356 VATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCND 415

Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
           + YGL++ + T +    N     +  G V
Sbjct: 416 SIYGLSAYVHTQSFANINQAISDLEVGEV 444

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  161 bits (409), Expect = 3e-43
 Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 9/157 (5%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKI 266
            N   +D      + + +   ++QG  +  GGK       + G + EPTV  +V  D  +
Sbjct: 334 CNQREID-----NIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIV 388

Query: 267 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINC 326
             EE FGP+  I+K  ++++ IE  ND+ YGL++ + T +    N     +  G V+IN 
Sbjct: 389 VHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINR 448

Query: 327 YQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
                 Q    G+K+SG G E GK  L++Y E KTV 
Sbjct: 449 GMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVY 485

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score = 87.2 bits (217), Expect = 2e-18
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           +   K GPAL  G  ++LKP ++TPL    +  + ++AG PDGV++V+ G G 
Sbjct: 164 LAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGS 216

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  243 bits (622), Expect = 8e-74
 Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 21/242 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYV 422
            +    A ++K+VSLELGG +P ++  DAD+D      +A  +      C VCA +R YV
Sbjct: 239 QLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTC-VCA-NRLYV 296

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           Q+ +YD F +K  +  +   +GD  D  V  GP +D +   KV  +I   +E+G ++  G
Sbjct: 297 QDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCG 356

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           GK     G F +PT+  +V  + K+++EE FGP+  + +FK   +VI +ANDT++GLA+ 
Sbjct: 357 GKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAY 416

Query: 543 IVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
               ++        A       IN G      APFGG K SG+GRE  K  +++Y E+K 
Sbjct: 417 FYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKY 476

Query: 596 VT 597
           + 
Sbjct: 477 MC 478

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  163 bits (414), Expect = 4e-44
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 5/153 (3%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           I+  +V      KV  +I   +E+G ++  GGK     G F +PT+  +V  + K+++EE
Sbjct: 331 IDEKAVA-----KVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEE 385

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
            FGP+  + +FK   +VI +ANDT++GLA+     ++        A+  G V IN     
Sbjct: 386 TFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS 445

Query: 331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
              APFGG K SG+GRE  K  +++Y E+K + 
Sbjct: 446 NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMC 478

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  161 bits (411), Expect = 1e-43
 Identities = 48/145 (33%), Positives = 78/145 (53%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YVQ+ +YD F +K  +  +   +GD  D  V  GP +D     KV  +I   +E+G +
Sbjct: 293 RLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGAR 352

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           +  GGK     G F +PT+  +V  + K+++EE FGP+  + +FK   +VI +ANDT++G
Sbjct: 353 VVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFG 412

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           LA+     ++        A+  G V
Sbjct: 413 LAAYFYARDLSRVFRVGEALEYGIV 437

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score = 87.6 bits (218), Expect = 2e-18
 Identities = 28/53 (52%), Positives = 36/53 (67%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M+  K GPALAAGC ++LKPA QTP +AL +A L  +AG P GV +V+ G   
Sbjct: 161 MITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAG 213

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  242 bits (621), Expect = 1e-73
 Identities = 81/242 (33%), Positives = 126/242 (52%), Gaps = 21/242 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYV 422
           ++ A +A  +K+++LELGG +P ++  DAD+D      +A  Y      C VC  +R +V
Sbjct: 242 LLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTC-VCT-NRFFV 299

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
            E +YD F  K     +  KVG   +     GP ++     KV ++I   + +G  L  G
Sbjct: 300 HERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTG 359

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           GKR      F EPTV + V  D  +A+EE FGP+  + +F + +E++  ANDT++GLA+ 
Sbjct: 360 GKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAY 419

Query: 543 IVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
           + + +I      A A       IN G      APFGG K+SG+GRE     +D+Y  +K 
Sbjct: 420 LYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKY 479

Query: 596 VT 597
           + 
Sbjct: 480 LC 481

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  162 bits (413), Expect = 5e-44
 Identities = 55/153 (35%), Positives = 83/153 (54%), Gaps = 5/153 (3%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           IN  +V      KV ++I   + +G  L  GGKR      F EPTV + V  D  +A+EE
Sbjct: 334 INEAAVK-----KVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEE 388

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
            FGP+  + +F + +E++  ANDT++GLA+ + + +I      A A+  G V IN     
Sbjct: 389 TFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLIS 448

Query: 331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
              APFGG K+SG+GRE     +D+Y  +K + 
Sbjct: 449 NEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLC 481

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  161 bits (411), Expect = 1e-43
 Identities = 48/145 (33%), Positives = 75/145 (51%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R +V E +YD F  K     +  KVG   +     GP ++     KV ++I   + +G  
Sbjct: 296 RFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGAS 355

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           L  GGKR      F EPTV + V  D  +A+EE FGP+  + +F + +E++  ANDT++G
Sbjct: 356 LMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFG 415

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           LA+ + + +I      A A+  G V
Sbjct: 416 LAAYLYSRDIGRVWRVAEALEYGMV 440

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score = 87.2 bits (217), Expect = 2e-18
 Identities = 30/53 (56%), Positives = 40/53 (75%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M+A K GPALAAGCP+++KPAE TP +AL +A L ++AG P GV+SV+ G   
Sbjct: 164 MIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPK 216

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  241 bits (617), Expect = 7e-73
 Identities = 95/242 (39%), Positives = 130/242 (53%), Gaps = 23/242 (9%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYV 422
           ++ A  A  +KR+SLELGG +P ++  DAD+D      M   Y      C VCA +R YV
Sbjct: 262 LLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTC-VCA-NRIYV 319

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
           Q  +YD F +K   K    KVG+  +  V  GP ++ +  TKV  +I+  V +G KL  G
Sbjct: 320 QRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITG 379

Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
           GK  G  G F EP + + VT D  +A+EE FGP+  +  F T +EVI +ANDT +GLA+ 
Sbjct: 380 GKELG--GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAY 437

Query: 543 IVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
             T N   A   + A        N G      APFGG K+SG+GRE  K  ++EY E K 
Sbjct: 438 FYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKY 497

Query: 596 VT 597
           + 
Sbjct: 498 IC 499

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  161 bits (409), Expect = 2e-43
 Identities = 60/153 (39%), Positives = 82/153 (53%), Gaps = 7/153 (4%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           I   ++      KV  +I+  V +G KL  GGK  G  G F EP + + VT D  +A+EE
Sbjct: 354 IEEKAIT-----KVKAHIEDAVSKGAKLITGGKELG--GLFFEPGILTGVTSDMLVAKEE 406

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
            FGP+  +  F T +EVI +ANDT +GLA+   T N   A   + A+  G V  N     
Sbjct: 407 TFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLIS 466

Query: 331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
              APFGG K+SG+GRE  K  ++EY E K + 
Sbjct: 467 NEVAPFGGVKQSGLGREGSKYGIEEYLETKYIC 499

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  160 bits (407), Expect = 5e-43
 Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 2/145 (1%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R YVQ  +YD F +K   K    KVG+  +  V  GP ++    TKV  +I+  V +G K
Sbjct: 316 RIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAK 375

Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
           L  GGK  G  G F EP + + VT D  +A+EE FGP+  +  F T +EVI +ANDT +G
Sbjct: 376 LITGGKELG--GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFG 433

Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
           LA+   T N   A   + A+  G V
Sbjct: 434 LAAYFYTENFSRAIRVSEALEYGMV 458

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score = 87.2 bits (217), Expect = 3e-18
 Identities = 24/53 (45%), Positives = 36/53 (67%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           M+  K  PALAAGC ++++PA+ TPLTAL +  L ++AG P GV+ ++ G   
Sbjct: 184 MITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAR 236

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  241 bits (617), Expect = 9e-73
 Identities = 82/243 (33%), Positives = 127/243 (52%), Gaps = 22/243 (9%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYV 422
            +    A  +K+++LELGG +P ++  DAD++      +A  +      C VCA +R +V
Sbjct: 241 KLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTC-VCA-NRIFV 298

Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
            E + D F +K  E+     VGD  +  +  GP ++ + F KV  +++  +++G  L AG
Sbjct: 299 HEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAG 358

Query: 483 GKRKGD-KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
            +      G F  PTV   V  +    +EE FGP+  +  F+T +EVI+  NDT++GLAS
Sbjct: 359 KQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLAS 418

Query: 542 GIVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
            + T + + A   A          N G+   P+APFGG K SGIGRE G   L E+ E +
Sbjct: 419 YVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQ 478

Query: 595 TVT 597
           TV 
Sbjct: 479 TVP 481

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  161 bits (409), Expect = 3e-43
 Identities = 57/154 (37%), Positives = 80/154 (51%), Gaps = 6/154 (3%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDFKIARE 269
           IN    D     KV  +++  +++G  L AG +      G F  PTV   V  +    +E
Sbjct: 333 INKQGFD-----KVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQE 387

Query: 270 EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA 329
           E FGP+  +  F+T +EVI+  NDT++GLAS + T + + A   A  +  G V  N    
Sbjct: 388 ETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTG 447

Query: 330 VVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
             P+APFGG K SGIGRE G   L E+ E +TV 
Sbjct: 448 PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVP 481

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  159 bits (404), Expect = 1e-42
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
           R +V E + D F +K  E+     VGD  +  +  GP ++   F KV  +++  +++G  
Sbjct: 295 RIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGAS 354

Query: 132 LEAGGKRKGD-KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
           L AG +      G F  PTV   V  +    +EE FGP+  +  F+T +EVI+  NDT++
Sbjct: 355 LVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEF 414

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GLAS + T + + A   A  +  G V
Sbjct: 415 GLASYVFTADAERAQRVAAGLRFGHV 440

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score = 87.2 bits (217), Expect = 3e-18
 Identities = 21/50 (42%), Positives = 34/50 (68%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           M+A K   ALAAGCP ++KPA +TPLT +   ++  +   PDG+++++ G
Sbjct: 163 MIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMG 212

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  240 bits (614), Expect = 2e-72
 Identities = 87/243 (35%), Positives = 122/243 (50%), Gaps = 22/243 (9%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYV 422
           I+   AA+++KRVS+ELGG +P ++   A+VD      MA  +      C VC+ ++  V
Sbjct: 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTC-VCS-NQFLV 300

Query: 423 QEDIYDTFVKKAVEKAAAR-KVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
           Q  I+D FVK   E      +VG+ F++   QGP ++ +   KV   +   V +G  +  
Sbjct: 301 QRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVT 360

Query: 482 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
           GGKR      F EPT+  NVT D     EE FGP+  +IKF T +E I  AN    GLA 
Sbjct: 361 GGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAG 420

Query: 542 GIVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
              + +       A         +N G     + PFGG K+SG+GRE  K  +DEY ELK
Sbjct: 421 YFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELK 480

Query: 595 TVT 597
            V 
Sbjct: 481 YVC 483

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  163 bits (415), Expect = 3e-44
 Identities = 57/153 (37%), Positives = 74/153 (48%), Gaps = 5/153 (3%)

Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
           IN  +V+     KV   +   V +G  +  GGKR      F EPT+  NVT D     EE
Sbjct: 336 INEKAVE-----KVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEE 390

Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
            FGP+  +IKF T +E I  AN    GLA    + +       A  +  G V +N     
Sbjct: 391 TFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS 450

Query: 331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
             + PFGG K+SG+GRE  K  +DEY ELK V 
Sbjct: 451 SVECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  158 bits (403), Expect = 2e-42
 Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 1/146 (0%)

Query: 72  RTYVQEDIYDTFVKKAVEKAAAR-KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           +  VQ  I+D FVK   E      +VG+ F++   QGP ++     KV   +   V +G 
Sbjct: 297 QFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGA 356

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            +  GGKR      F EPT+  NVT D     EE FGP+  +IKF T +E I  AN    
Sbjct: 357 TVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADV 416

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           GLA    + +       A  +  G V
Sbjct: 417 GLAGYFYSQDPAQIWRVAEQLEVGMV 442

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score = 87.6 bits (218), Expect = 2e-18
 Identities = 31/67 (46%), Positives = 39/67 (58%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M+  K G ALAAGC V++KPAE TP +AL +A L  QAG P GV +V+P     +     
Sbjct: 162 MITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE 221

Query: 61  KSCLSPL 67
             C  PL
Sbjct: 222 AICTDPL 228

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  246 bits (629), Expect = 7e-71
 Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 30/259 (11%)

Query: 371  TSHSIMAAAAA-----SNLKRVSLELGGKSPLVICADADVDM--------AYYY----CF 413
            T   I+  AA      +N+K++  E+GGK+ ++I  DAD+D         A+ +    C 
Sbjct: 757  TGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKC- 815

Query: 414  VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGV 473
              A SR  V + +YD F+++ V  A A KVG   D +   G   D +    +  Y + G 
Sbjct: 816  -SACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGK 874

Query: 474  EQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 533
             +G  L         +GYF+  T+   +  + +IA+EEIFGPV  +++ K  D+ IE AN
Sbjct: 875  REGHVL-YESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWAN 933

Query: 534  DTKYGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIGREL-G 583
             T++ L  GI + + +           G+         A+V + PFGG + SG+G +  G
Sbjct: 934  STQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGG 993

Query: 584  KAALDEYTELKTVTESPLR 602
               L  + + + VTE+ +R
Sbjct: 994  PDYLLHFMDPRVVTENTMR 1012

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  178 bits (454), Expect = 1e-47
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 4/156 (2%)

Query: 216  VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
             D +    +  Y + G  +G  L         +GYF+  T+   +  + +IA+EEIFGPV
Sbjct: 858  ADDKAMKSIKEYAEIGKREGHVL-YESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPV 916

Query: 276  QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQ 333
              +++ K  D+ IE AN T++ L  GI + + +           G+++IN     A+V +
Sbjct: 917  LAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVER 976

Query: 334  APFGGFKESGIGREL-GKAALDEYTELKTVTESPLR 368
             PFGG + SG+G +  G   L  + + + VTE+ +R
Sbjct: 977  QPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENTMR 1012

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  175 bits (447), Expect = 1e-46
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 1/146 (0%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
           SR  V + +YD F+++ V  A A KVG   D +   G   D      +  Y + G  +G 
Sbjct: 819 SRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGH 878

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            L         +GYF+  T+   +  + +IA+EEIFGPV  +++ K  D+ IE AN T++
Sbjct: 879 VL-YESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQF 937

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
            L  GI + + +           G++
Sbjct: 938 ALTGGIFSRSPEHLAKARREFRVGNL 963

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score = 81.6 bits (202), Expect = 3e-16
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
           +       A+  G  V+ KP+  T +   ++  L ++AG P+GV +  PG G 
Sbjct: 682 ISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGS 734

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  201 bits (512), Expect = 3e-55
 Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 29/252 (11%)

Query: 371 TSHSIMAAAAASN--LKRVSLELGGKSPLVICADADVDMA----YYYCFVCAG------S 418
            + SI  A AA +  +  +  E GG + ++  A A  +          F  AG       
Sbjct: 739 VARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALR 798

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
             +VQED+ D  ++     A   K+GDP D +   GP +D E   ++  +I    +   +
Sbjct: 799 LLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARM-KTEAR 857

Query: 479 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTK 536
           L   G     +G F+ P +F     +     EE+FGP+  +++++   L+ V+     T 
Sbjct: 858 LHFAGPA--PEGCFVAPHIFELT--EAGQLTEEVFGPILHVVRYRPENLERVLRAIERTG 913

Query: 537 YGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIG-RELGKAA 586
           YGL  G+ +   D+       +  G+         AVV   PFGG   SG G +  G   
Sbjct: 914 YGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHY 973

Query: 587 LDEYTELKTVTE 598
           L  +   +TVT 
Sbjct: 974 LARFATEQTVTI 985

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  141 bits (357), Expect = 2e-35
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 7/148 (4%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
              +VQED+ D  ++     A   K+GDP D +   GP +D     ++  +I    +   
Sbjct: 798 RLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARM-KTEA 856

Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDT 188
           +L   G     +G F+ P +F     +     EE+FGP+  +++++   L+ V+     T
Sbjct: 857 RLHFAGPA--PEGCFVAPHIFELT--EAGQLTEEVFGPILHVVRYRPENLERVLRAIERT 912

Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
            YGL  G+ +   D+       +  G++
Sbjct: 913 GYGLTLGVHSRIDDSIEAIIDRVQVGNI 940

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  140 bits (355), Expect = 4e-35
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +D E   ++  +I    +   +L   G     +G F+ P +F     +     EE+FGP+
Sbjct: 837 IDVEAKQRLDAHIARM-KTEARLHFAGPA--PEGCFVAPHIFELT--EAGQLTEEVFGPI 891

Query: 276 QTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVV 331
             +++++   L+ V+     T YGL  G+ +   D+       +  G++++N     AVV
Sbjct: 892 LHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVV 951

Query: 332 PQAPFGGFKESGIG-RELGKAALDEYTELKTVTESPLRSYTSHSIMAA 378
              PFGG   SG G +  G   L  +   +TVT +   +  + +++A 
Sbjct: 952 GVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTAAAGGNAALLAG 999

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score = 65.2 bits (159), Expect = 4e-11
 Identities = 20/50 (40%), Positives = 26/50 (52%)

Query: 3   AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
             +   AL AG  V+ KPAEQTP  A    AL  +AG P   + ++ G G
Sbjct: 667 LGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG 716

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  177 bits (450), Expect = 4e-49
 Identities = 82/241 (34%), Positives = 122/241 (50%), Gaps = 23/241 (9%)

Query: 380 AASNLKRVSLELGGKSPLVICADADVDMAYYY----CFVCAGSR------TYVQEDIYDT 429
            + NLKRV    G K+  ++  DA+++          F  AG R        V+E I D 
Sbjct: 239 GSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADE 298

Query: 430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-D 488
           F+ K  EK A  K+G+  D  V  GP +  +   + L+YI+ G+E+G +L   G+    D
Sbjct: 299 FMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSD 358

Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI 548
            GYF+ PT+F NVT +  I ++EIF PV ++I+ K L E IE AN +++   + + T+N 
Sbjct: 359 DGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNS 418

Query: 549 DTANTFAHAINAGSAV-------VPQA--PFGGFKESGIG--RELGKAALDEYTELKTVT 597
           +    F   I+AG  +        P A  PF G+K S  G     GK ++D YT  K VT
Sbjct: 419 NAIRYFRENIDAGM-LGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVT 477

Query: 598 E 598
            
Sbjct: 478 A 478

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  135 bits (343), Expect = 2e-34
 Identities = 53/143 (37%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 75  VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEA 134
           V+E I D F+ K  EK A  K+G+  D  V  GP +      + L+YI+ G+E+G +L  
Sbjct: 291 VEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVC 350

Query: 135 GGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 193
            G+    D GYF+ PT+F NVT +  I ++EIF PV ++I+ K L E IE AN +++   
Sbjct: 351 DGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANG 410

Query: 194 SGIVTTNIDTANTFAHAINAGSV 216
           + + T+N +    F   I+AG +
Sbjct: 411 ACLFTSNSNAIRYFRENIDAGML 433

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  133 bits (337), Expect = 1e-33
 Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 4/153 (2%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGP 274
           +  +   + L+YI+ G+E+G +L   G+    D GYF+ PT+F NVT +  I ++EIF P
Sbjct: 326 IREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAP 385

Query: 275 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQ 333
           V ++I+ K L E IE AN +++   + + T+N +    F   I+AG + IN      +  
Sbjct: 386 VLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAF 445

Query: 334 APFGGFKESGIG--RELGKAALDEYTELKTVTE 364
            PF G+K S  G     GK ++D YT  K VT 
Sbjct: 446 FPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score = 59.1 bits (144), Expect = 2e-09
 Identities = 19/47 (40%), Positives = 29/47 (61%)

Query: 4   WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           W +  A+A G   +LKP+E+TPL    +  L ++AG P GV +V+ G
Sbjct: 160 WMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG 206

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  170 bits (434), Expect = 1e-46
 Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 27/245 (11%)

Query: 380 AASNLKRVSLELGGKSPLVICADADVDMAYYY----CFVCAGSR-------TYVQEDIYD 428
           AA N KR     G K+ ++I  DAD+D A        +  AG R         V E+  +
Sbjct: 260 AAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETAN 319

Query: 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR--- 485
             + K V    + ++G   D+    GP V  E   ++ + I SG+EQG KL   G+    
Sbjct: 320 RLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKL 379

Query: 486 -KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
              + G+FI   +F +VT D  I + EIFGPV ++++ +  +E +      +YG    I 
Sbjct: 380 QGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIY 439

Query: 545 TTNIDTANTFAHAINAGSAV-------VPQA--PFGGFKESGIG--RELGKAALDEYTEL 593
           T + D A  FA  IN G  V       VP A   FGG+K S  G   + G  ++  +T  
Sbjct: 440 TRDGDAARDFASRINIGM-VGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRT 498

Query: 594 KTVTE 598
           KT+T 
Sbjct: 499 KTITS 503

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  131 bits (333), Expect = 6e-33
 Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 4/146 (2%)

Query: 75  VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEA 134
           V E+  +  + K V    + ++G   D+    GP V      ++ + I SG+EQG KL  
Sbjct: 313 VGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVV 372

Query: 135 GGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
            G+       + G+FI   +F +VT D  I + EIFGPV ++++ +  +E +      +Y
Sbjct: 373 DGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEY 432

Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
           G    I T + D A  FA  IN G V
Sbjct: 433 GNGVAIYTRDGDAARDFASRINIGMV 458

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  128 bits (325), Expect = 6e-32
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 7/156 (4%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEI 271
           V  E   ++ + I SG+EQG KL   G+       + G+FI   +F +VT D  I + EI
Sbjct: 348 VTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEI 407

Query: 272 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV- 330
           FGPV ++++ +  +E +      +YG    I T + D A  FA  IN G V +N    V 
Sbjct: 408 FGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVP 467

Query: 331 VPQAPFGGFKESGIG--RELGKAALDEYTELKTVTE 364
           +    FGG+K S  G   + G  ++  +T  KT+T 
Sbjct: 468 LAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS 503

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score = 59.2 bits (144), Expect = 2e-09
 Identities = 18/47 (38%), Positives = 30/47 (63%)

Query: 4   WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
           W + PA+A G   +LKP+E+ P   + +A L  +AG P G+++V+ G
Sbjct: 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG 227

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  159 bits (404), Expect = 5e-43
 Identities = 40/215 (18%), Positives = 69/215 (32%), Gaps = 25/215 (11%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQED 425
           M  AA S+ K       G  P+VI   AD+  A              VC +     V ++
Sbjct: 198 MVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDE 257

Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
           +YD   ++     A        DK V++   +D  +  K++             E  G +
Sbjct: 258 VYDEVKERFASHKAHVLSKTDADK-VRKVLLIDGALNAKIVGQP-----ATAIAEMAGVK 311

Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA----NDTKYGLAS 541
                  +       V+ D   A E+   P   + +    ++ + +A         G  S
Sbjct: 312 VPADTKVLIGEGLGKVSYDDAFAHEK-LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTS 370

Query: 542 GIVT---TNIDTANTFAHAINAGSAVVPQ-APFGG 572
           G+ T    N D    F   +     ++      GG
Sbjct: 371 GLYTNQDVNADRIRYFGDKMKTARILINIPTTHGG 405

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  132 bits (333), Expect = 3e-33
 Identities = 39/287 (13%), Positives = 69/287 (24%), Gaps = 81/287 (28%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGP--- 53
              +K   +L     ++  P  +   +    A L   A    G P  +I  +        
Sbjct: 119 TAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELS 178

Query: 54  ---MSAPYWRK--------------SCLSP----LAYRSRTYVQEDIYDTFVKKAVEKA- 91
              M                     S   P     A      + E   D  +K+AV    
Sbjct: 179 NALMKHDDIALILATGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETA-D--IKRAVASVL 235

Query: 92  -----------------------------------AARKVGDPFDKSVQQGPQVDAVMFT 116
                                              A        DK V++   +D  +  
Sbjct: 236 MSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADK-VRKVLLIDGALNA 294

Query: 117 KVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176
           K++             E  G +       +       V+ D   A E+   P   + +  
Sbjct: 295 KIVGQP-----ATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEK-LSPTLGMFRAD 348

Query: 177 TLDEVIERA----NDTKYGLASGIVT---TNIDTANTFAHAINAGSV 216
             ++ + +A         G  SG+ T    N D    F   +    +
Sbjct: 349 NFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARI 395

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  100 bits (252), Expect = 8e-23
 Identities = 21/140 (15%), Positives = 40/140 (28%), Gaps = 16/140 (11%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           +D  +  K++             E  G +       +       V+ D   A E+   P 
Sbjct: 288 IDGALNAKIVGQP-----ATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEK-LSPT 341

Query: 276 QTIIKFKTLDEVIERA----NDTKYGLASGIVT---TNIDTANTFAHAINAGSVWINCYQ 328
             + +    ++ + +A         G  SG+ T    N D    F   +    + IN   
Sbjct: 342 LGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPT 401

Query: 329 ---AVVPQAPFGGFKESGIG 345
               +     F       +G
Sbjct: 402 THGGIGDLYNFNVAPSLTLG 421

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  158 bits (402), Expect = 3e-42
 Identities = 35/258 (13%), Positives = 68/258 (26%), Gaps = 52/258 (20%)

Query: 376 MAAAAASNLKRVS--LELGGKSPLVICADADVDMAYY--------------YCFVCAGSR 419
           +   A    + +    ELG  +P  I   A    A                +C       
Sbjct: 237 LFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFC--TKPGV 294

Query: 420 TYVQED-IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
            +         F+        A+ +      S    P +     ++V   +  G + G  
Sbjct: 295 VFALNTPETQAFI------ETAQSLIRQQSPSTLLTPGIRDSYQSQV---VSRGSDDGID 345

Query: 479 LEAGGKRKGDKGYFIEPTVFSNVTDDF---KIAREEIFGPVQTIIKFKTLDEVIERANDT 535
           +             +   +F   ++++       EEIFGP   I+  + + +++  +   
Sbjct: 346 VTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML 401

Query: 536 KYGLASGIVTTNIDTANTFAHA-----------IN---AGSAVVPQAPFGGFKES---GI 578
              L + I  T  D                    N    G  V      GG   +     
Sbjct: 402 AGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA 461

Query: 579 GRELGKAALDEYTELKTV 596
              +G  A+  +      
Sbjct: 462 STSVGAEAIHRWLRPVAY 479

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  120 bits (303), Expect = 4e-29
 Identities = 22/149 (14%), Positives = 45/149 (30%), Gaps = 17/149 (11%)

Query: 227 YIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF---KIAREEIFGPVQTIIKFKT 283
            +  G + G  +             +   +F   ++++       EEIFGP   I+  + 
Sbjct: 335 VVSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN 390

Query: 284 LDEVIERANDTKYGLASGIVTTNIDTANTFAHA----INAGSVWINCY---QAVVPQAPF 336
           + +++  +      L + I  T  D              AG +  N +     V      
Sbjct: 391 VADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVH 450

Query: 337 GGFKES---GIGRELGKAALDEYTELKTV 362
           GG   +        +G  A+  +      
Sbjct: 451 GGPYPASTHSASTSVGAEAIHRWLRPVAY 479

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  102 bits (256), Expect = 3e-23
 Identities = 21/150 (14%), Positives = 45/150 (30%), Gaps = 21/150 (14%)

Query: 63  CLSPLAYRSRTYVQED-IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
           C  P       +         F+        A+ +      S    P +     ++V   
Sbjct: 289 CTKP----GVVFALNTPETQAFI------ETAQSLIRQQSPSTLLTPGIRDSYQSQV--- 335

Query: 122 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF---KIAREEIFGPVQTIIKFKTL 178
           +  G + G  +             +   +F   ++++       EEIFGP   I+  + +
Sbjct: 336 VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENV 391

Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFA 208
            +++  +      L + I  T  D      
Sbjct: 392 ADMLSLSEMLAGSLTATIHATEEDYPQVSQ 421

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score = 77.0 bits (190), Expect = 4e-15
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGP 53
                   ALAAGCPV++K     P T+  VA   +QA      P  + ++L G   
Sbjct: 154 AAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQR 210

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  147 bits (374), Expect = 2e-38
 Identities = 42/256 (16%), Positives = 68/256 (26%), Gaps = 47/256 (18%)

Query: 375 IMAAAAAS-NLKRVSLELGGKSPLVICADADVDMAYYY-------CFVCAG------SRT 420
           +    AA         ELG  +P+ +  +A    A            + AG         
Sbjct: 270 LFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIA 329

Query: 421 YVQEDI-YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKL 479
            V E    D F   AVE  A           + +  +     F               K 
Sbjct: 330 VVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFAT---------RNAVKP 380

Query: 480 EAGGKRKGDKGYFIEPTVFSNVTDDF---KIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
               +  G       P +F      F       EE+FGP+  +++  +  E+ E A   +
Sbjct: 381 LLATESSG---RDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ 437

Query: 537 YGLASGIVTTNIDTANTFAHA-----------IN---AGSAVVP-QAPFGGFKESGIGR- 580
             L + I     D                   +N    G  VV      G +  S     
Sbjct: 438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGA 497

Query: 581 -ELGKAALDEYTELKT 595
             +G  ++  +     
Sbjct: 498 TSVGTMSIRRFLRPVA 513

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  110 bits (276), Expect = 1e-25
 Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 15/173 (8%)

Query: 204 ANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVT 261
                 A+   +    +   +    + G  +     A          G    P +F    
Sbjct: 341 TTAAVEALAKVAPQTMLTDGIAKAYRDGQARFATRNAVKPLLATESSGRDASPNLFETTG 400

Query: 262 DDF---KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHA-- 316
             F       EE+FGP+  +++  +  E+ E A   +  L + I     D          
Sbjct: 401 AQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPV 460

Query: 317 --INAGSVWINCYQAVV----PQAPFGGFKESGIGR--ELGKAALDEYTELKT 361
               AG V +N +   V         G +  S       +G  ++  +     
Sbjct: 461 LERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVA 513

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  102 bits (255), Expect = 4e-23
 Identities = 27/154 (17%), Positives = 42/154 (27%), Gaps = 24/154 (15%)

Query: 63  CLSPLAYRSRTYVQEDI-YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
           C +P        V E    D F   AVE  A           + +  +            
Sbjct: 323 CTNP----GIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYR------------ 366

Query: 122 IKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDDF---KIAREEIFGPVQTIIKFK 176
              G  +     A          G    P +F      F       EE+FGP+  +++  
Sbjct: 367 --DGQARFATRNAVKPLLATESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVG 424

Query: 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHA 210
           +  E+ E A   +  L + I     D        
Sbjct: 425 SPAEMEELARGFQGQLTATIHMDAGDLETARRLR 458

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score = 70.9 bits (174), Expect = 4e-13
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 4/55 (7%)

Query: 3   AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGP 53
                 ALAAGCPV++K     P T   VA     A    G   GV S++ G   
Sbjct: 189 GGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSR 243

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  143 bits (363), Expect = 9e-37
 Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 33/254 (12%)

Query: 383 NLKRVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTF 430
              R++ E GGK+   + + ADVD         A+ Y    C   A SR YV + ++   
Sbjct: 307 TFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKC--SACSRLYVPKSLWPQI 364

Query: 431 VKKAVEKAAARKVGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGD 488
             + +E+ +  KVGDP  D        +DA+ F ++  +++         + AGG+    
Sbjct: 365 KGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNES 424

Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERAND-TKYGLASGIVT 545
            GY++EP +  +      I +EEIFGPV T+  +      E ++  +  T YGL   +  
Sbjct: 425 VGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFA 484

Query: 546 TN---IDTANTFAHA------INAGS--AVVPQAPFGGFKESGIGRELGKAA-LDEYTEL 593
            +   +  A            IN  S  +VV Q PFGG + SG   + G    +  +T  
Sbjct: 485 QDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSP 544

Query: 594 KTVTES--PLRSYT 605
           + + E+  PL  + 
Sbjct: 545 QVIKETHKPLGDWR 558

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  113 bits (286), Expect = 8e-27
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 5/135 (3%)

Query: 71  SRTYVQEDIYDTFVKKAVEKAAARKVGDPF-DKSVQQGPQVDAVMFTKVLNYIKSGVEQG 129
           SR YV + ++     + +E+ +  KVGDP  D        +DA  F ++  +++      
Sbjct: 352 SRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSP 411

Query: 130 G-KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERAN 186
              + AGG+     GY++EP +  +      I +EEIFGPV T+  +      E ++  +
Sbjct: 412 SLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVD 471

Query: 187 D-TKYGLASGIVTTN 200
             T YGL   +   +
Sbjct: 472 STTSYGLTGAVFAQD 486

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  108 bits (272), Expect = 5e-25
 Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 24/208 (11%)

Query: 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQG 235
           +    ++E  +  K G          D A  F    +A  +DA+ F ++  +++      
Sbjct: 363 QIKGRLLEEHSRIKVG----------DPAEDFGTFFSA-VIDAKAFARIKKWLEHARSSP 411

Query: 236 G-KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERAN 292
              + AGG+     GY++EP +  +      I +EEIFGPV T+  +      E ++  +
Sbjct: 412 SLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVD 471

Query: 293 D-TKYGLASGIVTTN---IDTANTFAHAINAGSVWINCYQ--AVVPQAPFGGFKESGIGR 346
             T YGL   +   +   +  A        AG+ +IN     +VV Q PFGG + SG   
Sbjct: 472 STTSYGLTGAVFAQDKAIVQEATRMLR-NAAGNFYINDKSTGSVVGQQPFGGARASGTND 530

Query: 347 ELGKAA-LDEYTELKTVTES--PLRSYT 371
           + G    +  +T  + + E+  PL  + 
Sbjct: 531 KPGGPHYILRWTSPQVIKETHKPLGDWR 558

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score = 60.7 bits (148), Expect = 8e-10
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 9   ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPM 54
               G  VL KP++   L +  V  + ++AG P  +I  +P  GP 
Sbjct: 223 PALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPT 268

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score =  133 bits (336), Expect = 1e-33
 Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 28/248 (11%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGSRT-------YVQ 423
           I+  AAA +L  V+LELGGKSP  +  + D+D+A     +  F+ +G +T          
Sbjct: 211 IIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSG-QTCVAPDYILCD 269

Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
             I +  V+  ++K+     G+   KS   G  + A  F +V+  I+     G K+  GG
Sbjct: 270 PSIQNQIVE-KLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIE-----GQKVAYGG 323

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
                   +I PT+ ++V     + +EEIFGPV  I+  ++L+E I+  N  +  LA  +
Sbjct: 324 TGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYM 382

Query: 544 VTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTELK 594
            ++N           ++G                PFGG   SG+G   GK + + ++  +
Sbjct: 383 FSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRR 442

Query: 595 TVTESPLR 602
           +    PL 
Sbjct: 443 SCLVRPLM 450

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score = 98.0 bits (245), Expect = 7e-22
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 8/155 (5%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           + A  F +V+  I+     G K+  GG        +I PT+ ++V     + +EEIFGPV
Sbjct: 302 ISARHFQRVMGLIE-----GQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPV 355

Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQ 333
             I+  ++L+E I+  N  +  LA  + ++N           ++G V  N       +  
Sbjct: 356 LPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHS 415

Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVTESPLR 368
            PFGG   SG+G   GK + + ++  ++    PL 
Sbjct: 416 LPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLM 450

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score = 71.4 bits (176), Expect = 2e-13
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 7/143 (4%)

Query: 74  YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
                I +  V+  ++K+     G+   KS   G  + A  F +V+  I+     G K+ 
Sbjct: 267 LCDPSIQNQIVE-KLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIE-----GQKVA 320

Query: 134 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 193
            GG        +I PT+ ++V     + +EEIFGPV  I+  ++L+E I+  N  +  LA
Sbjct: 321 YGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLA 379

Query: 194 SGIVTTNIDTANTFAHAINAGSV 216
             + ++N           ++G V
Sbjct: 380 LYMFSSNDKVIKKMIAETSSGGV 402

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score =  122 bits (308), Expect = 5e-30
 Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 21/242 (8%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGSRTYVQED--IYD 428
           ++  AAA +L  V LELGGK PL++  DAD+D       +  F+ +G +T +  D     
Sbjct: 221 VVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSG-QTXIAPDYLYVH 279

Query: 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD 488
             VK A+ +    +V     +    G  V      ++++ ++      G++  G +    
Sbjct: 280 YSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLE---ATQGQVLVGSQADVS 336

Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK-YGLASGIVTTN 547
           K   +  TV   V  +  +  EE+FGP+  +++F ++   I++ N      LA  +   +
Sbjct: 337 KRA-LSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKD 395

Query: 548 IDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTELKTVTE 598
           +D A    + I +G A V         P  PFGG   SG+G   G  +   +T  K+V  
Sbjct: 396 MDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455

Query: 599 SP 600
            P
Sbjct: 456 VP 457

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score = 86.3 bits (214), Expect = 4e-18
 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 7/154 (4%)

Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
           V      ++++ ++      G++  G +    K   +  TV   V  +  +  EE+FGP+
Sbjct: 308 VTERQVQRLVSLLE---ATQGQVLVGSQADVSKRA-LSATVVDGVEWNDPLMSEELFGPI 363

Query: 276 QTIIKFKTLDEVIERANDTK-YGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVP 332
             +++F ++   I++ N      LA  +   ++D A    + I +G   +N     A  P
Sbjct: 364 LPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSP 423

Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTVTESP 366
             PFGG   SG+G   G  +   +T  K+V   P
Sbjct: 424 YLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIVP 457

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score = 57.4 bits (139), Expect = 8e-09
 Identities = 23/135 (17%), Positives = 55/135 (40%), Gaps = 1/135 (0%)

Query: 83  FVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 142
           +V  +V+ A   ++ +     + +      ++  + +  + S +E        G +    
Sbjct: 277 YVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGSQADVS 336

Query: 143 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK-YGLASGIVTTNI 201
              +  TV   V  +  +  EE+FGP+  +++F ++   I++ N      LA  +   ++
Sbjct: 337 KRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDM 396

Query: 202 DTANTFAHAINAGSV 216
           D A    + I +G  
Sbjct: 397 DVAKGIINQIQSGDA 411

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score =  116 bits (292), Expect = 7e-28
 Identities = 36/212 (16%), Positives = 63/212 (29%), Gaps = 22/212 (10%)

Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQED 425
           M  AA S+         G  P  I   A++  A  +           +C +     V+  
Sbjct: 203 MVKAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERV 262

Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
             +  + +  ++ A         ++VQ G  +     +     +   V+    L AG   
Sbjct: 263 NKEAVIAEFRKQGAHFLSDA---EAVQLGKFILRPNGSMNPAIVGKSVQHIANL-AGLTV 318

Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY----GLAS 541
             D    I     + V      +  E   P+      +T  E  E + D  Y    G   
Sbjct: 319 PADARVLIAEE--TKVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTL 375

Query: 542 GIVTTNIDTANTFAHAINAGSAVVPQ-APFGG 572
            I + + +    FA        +V      GG
Sbjct: 376 IIHSEDKEIIREFALKKPVSRLLVNTPGALGG 407

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 99.8 bits (249), Expect = 2e-22
 Identities = 39/281 (13%), Positives = 70/281 (24%), Gaps = 72/281 (25%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQ----AGFPDGVISVLPGYGP--- 53
            + +K   ++ AG  ++  P        L    +  +    AG P G IS +        
Sbjct: 124 TVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGT 183

Query: 54  ---MSAPYWRK--------------SCLSPLAY----RSRTYVQEDIYDTFVKKAVEKAA 92
              M                     S  +P           +++       + +AV+   
Sbjct: 184 DQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPGNGPAFIERSAN---IPRAVKHIL 240

Query: 93  ARKVGD---------------------------------PFDKSVQQGPQVDAVMFTKVL 119
             K  D                                    ++VQ G  +     +   
Sbjct: 241 DSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNP 300

Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 179
             +   V+    L AG     D    I     + V      +  E   P+      +T  
Sbjct: 301 AIVGKSVQHIANL-AGLTVPADARVLIAEE--TKVGAKIPYS-REKLAPILAFYTAETWQ 356

Query: 180 EVIERANDTKY----GLASGIVTTNIDTANTFAHAINAGSV 216
           E  E + D  Y    G    I + + +    FA       +
Sbjct: 357 EACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRL 397

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 79.3 bits (196), Expect = 8e-16
 Identities = 19/104 (18%), Positives = 31/104 (29%), Gaps = 8/104 (7%)

Query: 226 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 285
             +   V+    L AG     D    I     + V      +  E   P+      +T  
Sbjct: 301 AIVGKSVQHIANL-AGLTVPADARVLIAEE--TKVGAKIPYS-REKLAPILAFYTAETWQ 356

Query: 286 EVIERANDTKY----GLASGIVTTNIDTANTFAHAINAGSVWIN 325
           E  E + D  Y    G    I + + +    FA       + +N
Sbjct: 357 EACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVN 400

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.0 bits (134), Expect = 3e-08
 Identities = 62/512 (12%), Positives = 137/512 (26%), Gaps = 150/512 (29%)

Query: 18  LKPAE-----------QTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRK--SCL 64
           L+PA+           +T +      +   Q      +             +W    +C 
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI-------------FWLNLKNCN 193

Query: 65  SP---------LAYR-SRTYVQEDIYDTFVKKAVEKAAARK----VGDPFDKS------V 104
           SP         L Y+    +     + + +K  +    A         P++        V
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

Query: 105 QQGPQVDA------VMFT----KVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP---TVF 151
           Q     +A      ++ T    +V +++ +       L+                  ++ 
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD-----HHSMT-LTPDEVKSLL 307

Query: 152 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI 211
               D                 + + L   +   N  +  + +  +   + T + + H  
Sbjct: 308 LKYLD----------------CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH-- 349

Query: 212 NAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI----- 266
               V+ +  T +   I+S +     LE    RK     F   +VF        I     
Sbjct: 350 ----VNCDKLTTI---IESSLNV---LEPAEYRK----MFDRLSVFP---PSAHIPTILL 392

Query: 267 -------AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA-HAIN 318
                   + ++   V  + K  +L  V ++  ++   + S  +   +   N +A H   
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHK-YSL--VEKQPKESTISIPSIYLELKVKLENEYALHRS- 448

Query: 319 AGSVWINCYQAV--VPQAPFGGFKESG-----IGRELGKAALDEYTELKTVTESPLRS-Y 370
                ++ Y                       IG  L      E   L        R  +
Sbjct: 449 ----IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL-------FRMVF 497

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQ--EDIYD 428
                +       ++  S        +    +    + +Y  ++C     Y +    I D
Sbjct: 498 LDFRFLEQK----IRHDSTAWNASGSI---LNTLQQLKFYKPYICDNDPKYERLVNAILD 550

Query: 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAE 460
            F+ K  E      +   +   ++     + E
Sbjct: 551 -FLPKIEENL----ICSKYTDLLRIALMAEDE 577

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 9e-06
 Identities = 84/550 (15%), Positives = 159/550 (28%), Gaps = 153/550 (27%)

Query: 71  SRTYV--------QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYI 122
           S T          QE++   FV++ +       +  P  K+ Q+ P +   M+ +  + +
Sbjct: 62  SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF-LMSPI-KTEQRQPSMMTRMYIEQRDRL 119

Query: 123 KSGVEQGGKLEAGGKRKGDKGYFIEPTVFS--NVTDDFKIAREEIFGPVQTIIKFKTLDE 180
            +  +                      VF+  NV+      R +          +  L +
Sbjct: 120 YNDNQ----------------------VFAKYNVS------RLQ---------PYLKLRQ 142

Query: 181 VIERANDTK----YG--------LASGIV-TTNIDTANTFA-HAINAGSVDA-----EMF 221
            +      K     G        +A  +  +  +     F    +N  + ++     EM 
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202

Query: 222 TKVLNYIKSGVEQGG------KLEAGGKRKGDKGYFIEPTVFSN---VTDDFKIARE-EI 271
            K+L  I              KL     +   +        + N   V  + + A+    
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK-PYENCLLVLLNVQNAKAWNA 261

Query: 272 FGPVQTIIKFKTLDEVIER-ANDTKYGLASGIVTTNI---DTANTFAHAINAG--SVWIN 325
           F      +  K L  +  R    T +   S   TT+I     + T            +++
Sbjct: 262 FN-----LSCKIL--LTTRFKQVTDF--LSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 326 C-YQAVVPQA----PFGGFKESGIGREL--GKAALDEYTELKTVTESPLRSYTSHSIMAA 378
           C  Q +  +     P    + S I   +  G A  D +   K V    L +    S+   
Sbjct: 313 CRPQDLPREVLTTNP---RRLSIIAESIRDGLATWDNW---KHVNCDKLTTIIESSL-NV 365

Query: 379 AAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYDTFVKKA-VEK 437
              +  +++   L      V    A +        +           + +   K + VEK
Sbjct: 366 LEPAEYRKMFDRLS-----VFPPSAHI-PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419

Query: 438 -AAARKVGDP---FDKSVQQGPQVDAEMFTKVLN-Y-IKSGVEQGGKLEAGGKRKGDKGY 491
                 +  P    +  V+   + +  +   +++ Y I    +    +        D  Y
Sbjct: 420 QPKESTISIPSIYLELKVK--LENEYALHRSIVDHYNIPKTFDSDDLI----PPYLD-QY 472

Query: 492 F----------IEPT----VFSNVTDDF-----KI-----AREEIFGPVQTIIKFKTLDE 527
           F          IE      +F  V  DF     KI     A       + T+ + K    
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532

Query: 528 VIERANDTKY 537
            I   ND KY
Sbjct: 533 YICD-NDPKY 541

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	605
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	99.98
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	99.98
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	99.97
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	99.96
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	99.95
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	99.95
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	99.91
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	99.91
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	99.9
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	99.89
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	99.89
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	99.85

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=3.9e-64  Score=541.89  Aligned_cols=242  Identities=41%  Similarity=0.665  Sum_probs=226.2

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+++++.++++++||++||||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       222 v~~I~FTGS~---~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i  298 (490)
T 2wme_A          222 IEKISFTGGT---STGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQ  298 (490)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGG
T ss_pred             CCEEEEECCh---HHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhH
Confidence            3455789986   9999998877777899999999999999999999999986          56669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVT  502 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~  502 (605)
                      +|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||+...    ..|+|++|||+.+++
T Consensus       299 ~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~  378 (490)
T 2wme_A          299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCR  378 (490)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCC
T ss_pred             HHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCC
Confidence            9999999999999999999999999999999999999999999999999999999997643    368999999999999


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCC
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKE  575 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~  575 (605)
                      ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.++       .+.+||||+|.
T Consensus       379 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~  458 (490)
T 2wme_A          379 DDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQ  458 (490)
T ss_dssp             TTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGG
T ss_pred             CCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999843       35689999999


Q ss_pred             CCCCChhHHHHHHHhhhceEEEEcCC
Q psy1099         576 SGIGRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       576 SG~G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      ||+|+++|++++++||+.|+|+++..
T Consensus       459 SG~Gre~G~~gl~~ft~~K~v~i~~g  484 (490)
T 2wme_A          459 SGVGRENGLTTLAHYTRIKSVQVELG  484 (490)
T ss_dssp             GEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred             cccCchhHHHHHHHhhceeEEEEECC
Confidence            99999999999999999999997653

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=1.8e-60  Score=513.81  Aligned_cols=240  Identities=27%  Similarity=0.450  Sum_probs=225.4

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ...+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       203 d~I~fTGS~---~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~  278 (484)
T 3ros_A          203 QGVALTGSE---RGGSAVAEAAGK-NLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRY  278 (484)
T ss_dssp             EEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGH
T ss_pred             CEEEEECCH---HHHHHHHHHHhc-cCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHH
Confidence            344789985   999999988886 999999999999999999999999997          455599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++
T Consensus       279 d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i  358 (484)
T 3ros_A          279 DEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPV  358 (484)
T ss_dssp             HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTT
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999865568999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|++++       +.+||||+|+||+|+
T Consensus       359 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr  438 (484)
T 3ros_A          359 FDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGR  438 (484)
T ss_dssp             TTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESC
T ss_pred             cccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCc
Confidence            9999999999999999999999999999999999999999999999999999999443       458999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEcCC
Q psy1099         581 ELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      ++|++++++||+.|+|+.+..
T Consensus       439 ~~G~~gl~~ft~~K~v~~~~~  459 (484)
T 3ros_A          439 ELSGLGLMAFVNEHLVIDVTK  459 (484)
T ss_dssp             BSHHHHHTTTCEEEEEEECGG
T ss_pred             CchHHHHHHhheeEEEEECCC
Confidence            999999999999999987643

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=1.1e-60  Score=515.97  Aligned_cols=238  Identities=33%  Similarity=0.543  Sum_probs=223.8

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       228 v~~v~FTGS~---~~G~~i~~~aa~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  303 (484)
T 3ifg_A          228 VRKLSFTGST---AVGRLLMAQSAP-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERV  303 (484)
T ss_dssp             CCEEEEESCH---HHHHHHHHHTGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGG
T ss_pred             cCEEEEECCH---HHHHHHHHHhhc-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHH
Confidence            3445789985   999999988876 999999999999999999999999986          46669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|+
T Consensus       304 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~  383 (484)
T 3ifg_A          304 YDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMD  383 (484)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSG
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCCh
Confidence            99999999999999999999999999999999999999999999999999999999986555799999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+++       .+.+||||+|+||+|
T Consensus       384 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G  463 (484)
T 3ifg_A          384 VAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLG  463 (484)
T ss_dssp             GGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEEC
T ss_pred             hhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCC
Confidence            9999999999999999999999999999999999999999999999999999999843       346899999999999


Q ss_pred             ChhHHHHHHHhhhceEEEE
Q psy1099         580 RELGKAALDEYTELKTVTE  598 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~  598 (605)
                      +++|++++++||+.|+|+.
T Consensus       464 r~~g~~gl~~~~~~k~v~~  482 (484)
T 3ifg_A          464 REGSHYGIDDYVVIKYLCV  482 (484)
T ss_dssp             CBSTTTTTGGGEEEEEEEE
T ss_pred             CCchHHHHHHhhceEEEEE
Confidence            9999999999999999976

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=2e-60  Score=517.24  Aligned_cols=241  Identities=38%  Similarity=0.642  Sum_probs=225.3

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      ....+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       250 vd~V~FTGS~---~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i  325 (520)
T 3ed6_A          250 VDLVSFTGGI---ETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSI  325 (520)
T ss_dssp             CSEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHH
T ss_pred             cCEEEEECCH---HHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHH
Confidence            3445789985   999999988876 999999999999999999999999986          46669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVT  502 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~  502 (605)
                      +|+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||+...    ..|+|++|||+.+++
T Consensus       326 ~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~  405 (520)
T 3ed6_A          326 KDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCD  405 (520)
T ss_dssp             HHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCC
T ss_pred             HHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCC
Confidence            9999999999999999999999999999999999999999999999999999999997642    479999999999999


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCC
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKE  575 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~  575 (605)
                      ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|++++       +.+||||+|.
T Consensus       406 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~  485 (520)
T 3ed6_A          406 TSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQ  485 (520)
T ss_dssp             TTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGG
T ss_pred             CCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCc
Confidence            999999999999999999999999999999999999999999999999999999999998433       5689999999


Q ss_pred             CCCCChhHHHHHHHhhhceEEEEcCC
Q psy1099         576 SGIGRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       576 SG~G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      ||+|+++|++++++||+.|+|+.+..
T Consensus       486 SG~Gre~G~~gl~~~t~~k~v~~~~~  511 (520)
T 3ed6_A          486 SGIGRELGKEGLEEYLVSKHILTNTN  511 (520)
T ss_dssp             GEESCBSHHHHHHTTEEEEEEEEESS
T ss_pred             CcCCccchHHHHHHhhceEEEEEcCC
Confidence            99999999999999999999987653

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=3e-60  Score=514.11  Aligned_cols=242  Identities=33%  Similarity=0.541  Sum_probs=224.1

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       227 vd~I~FTGS~---~vG~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  302 (506)
T 3rh9_A          227 VPMLSFTGST---EVGRKLIVDTAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKV  302 (506)
T ss_dssp             CCEEEEESCH---HHHHHHHHHTTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTT
T ss_pred             CCEEEEECCH---HHHHHHHHHhhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHH
Confidence            3445789985   999999888775 999999999999999999999999986          45569999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCeeEeeEEeecCCCCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~-~g~~~~Pti~~~~~~~~  505 (605)
                      +|+|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|
T Consensus       303 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~  382 (506)
T 3rh9_A          303 ADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREM  382 (506)
T ss_dssp             HHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTS
T ss_pred             HHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999976444 79999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI  578 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~  578 (605)
                      ++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|++.+       +.+||||+|.||+
T Consensus       383 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~  462 (506)
T 3rh9_A          383 CCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGI  462 (506)
T ss_dssp             HHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEE
T ss_pred             hhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcC
Confidence            999999999999999999999999999999999999999999999999999999998443       3479999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcCCC
Q psy1099         579 GRELGKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~~~  602 (605)
                      |+++|++++++||+.|+|+.+...
T Consensus       463 G~~~G~~gl~~ft~~K~v~~~~~~  486 (506)
T 3rh9_A          463 GREGGLEGLFEFVEAQTVPRGFAE  486 (506)
T ss_dssp             SCBSHHHHHTTTEEEEEEEEC---
T ss_pred             CcCccHHHHHHhcceEEEEEcCcc
Confidence            999999999999999999876543

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=5.5e-60  Score=513.41  Aligned_cols=240  Identities=43%  Similarity=0.715  Sum_probs=224.1

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++.+++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       258 v~~V~FTGS~---~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i  334 (517)
T 2o2p_A          258 VRKIGFTGST---EVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESI  334 (517)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH
T ss_pred             CCEEEEECCH---HHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHH
Confidence            4455789985   9999999888723999999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|++++.++++|+|.++++++||+++..+++++.+++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus       335 ~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~  414 (517)
T 2o2p_A          335 HNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMY  414 (517)
T ss_dssp             HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSG
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCCh
Confidence            99999999999999999999999999999999999999999999999999999999976444699999999999999999


Q ss_pred             ccccceeeeeeeeEeeCC--HHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG  577 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~--~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG  577 (605)
                      +++||+||||++|++|+|  ++|||+++|+++|||+++|||+|.++++++++++++|.+++       +.+||||+|+||
T Consensus       415 i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG  494 (517)
T 2o2p_A          415 IAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSG  494 (517)
T ss_dssp             GGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGE
T ss_pred             hhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCC
Confidence            999999999999999999  99999999999999999999999999999999999998433       468999999999


Q ss_pred             CCChhHHHHHHHhhhceEEEEc
Q psy1099         578 IGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +|+++|.+++++||+.|+|+.+
T Consensus       495 ~Gr~~G~~~l~~~~~~k~v~~~  516 (517)
T 2o2p_A          495 FGKDLGEAALNEYLRIKTVTFE  516 (517)
T ss_dssp             ECCBSHHHHHHTTEEEEEEEEE
T ss_pred             cCccChHHHHHHhCCceEEEee
Confidence            9999999999999999999864

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.5e-60  Score=514.65  Aligned_cols=240  Identities=39%  Similarity=0.647  Sum_probs=224.8

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      ....+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       241 vd~I~FTGS~---~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  316 (528)
T 3u4j_A          241 VDMVAFTGSV---RVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGI  316 (528)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGG
T ss_pred             cCEEEEeCCH---HHHHHHHHHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechH
Confidence            3445789985   999999988776 999999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCeeEeeEEeecCCCCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~-~g~~~~Pti~~~~~~~~  505 (605)
                      +|+|+++|++++.++++|+|.++.+++||++++.+++++.+++++++++|+++++||..... .|+|++|||+.+++++|
T Consensus       317 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~  396 (528)
T 3u4j_A          317 RDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDM  396 (528)
T ss_dssp             HHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTS
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999986543 79999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGI  578 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~  578 (605)
                      ++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|++.       .+.+||||+|+||+
T Consensus       397 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~  476 (528)
T 3u4j_A          397 SIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGL  476 (528)
T ss_dssp             HHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEE
T ss_pred             ccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999843       34579999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcC
Q psy1099         579 GRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+++|++++++||+.|+|+.+.
T Consensus       477 Gr~~G~~gl~~ft~~K~v~~~~  498 (528)
T 3u4j_A          477 GRELGRYGFDEYSQFKGVHVTL  498 (528)
T ss_dssp             SCBSTTHHHHHTEEEEEEEEES
T ss_pred             CcCchHHHHHHhhceEEEEEeC
Confidence            9999999999999999998764

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=2.7e-60  Score=514.30  Aligned_cols=239  Identities=38%  Similarity=0.583  Sum_probs=224.2

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      ....+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       248 v~~V~FTGS~---~~G~~i~~~aa~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i  323 (504)
T 3ek1_A          248 VRKLSFTGST---EVGRLLMAQCAP-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGV  323 (504)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHGG-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHH
T ss_pred             cCEEEEECCH---HHHHHHHHhhhh-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhH
Confidence            3445789986   999999988876 999999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|+++++++++|+|.++.+++||++++.+++++++++++++++|+++++||+.  ..|+|++|||+.+++++|+
T Consensus       324 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~  401 (504)
T 3ek1_A          324 YDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDML  401 (504)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSG
T ss_pred             HHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcCh
Confidence            99999999999999999999999999999999999999999999999999999999976  3699999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|++++       +.+||||+|+||+|
T Consensus       402 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G  481 (504)
T 3ek1_A          402 VAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLG  481 (504)
T ss_dssp             GGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEES
T ss_pred             hhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCC
Confidence            99999999999999999999999999999999999999999999999999999998433       45799999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEcCC
Q psy1099         580 RELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      +++|++++++||+.|+|+.+..
T Consensus       482 r~~G~~gl~~~t~~K~v~~~~g  503 (504)
T 3ek1_A          482 REGSKYGIEEYLETKYICSAYK  503 (504)
T ss_dssp             CBSTTTSGGGGEEEEEEEEECC
T ss_pred             CCCcHHHHHHhhceEEEEEecC
Confidence            9999999999999999988654

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=8.4e-60  Score=511.89  Aligned_cols=240  Identities=40%  Similarity=0.648  Sum_probs=224.7

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      ....+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       231 v~~I~FTGS~---~~G~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  306 (503)
T 3iwj_A          231 VDKVAFTGSS---ATGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESI  306 (503)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTT
T ss_pred             ccEEEEECcH---HHHHHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHH
Confidence            3445789985   999999988776 999999999999999999999999986          45569999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~  504 (605)
                      +|+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||...+  ..|+|++|||+.+++++
T Consensus       307 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~  386 (503)
T 3iwj_A          307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTN  386 (503)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTT
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCC
Confidence            9999999999999999999999999999999999999999999999999999999997644  57999999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG  577 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG  577 (605)
                      |++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|++++       +.+||||+|.||
T Consensus       387 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG  466 (503)
T 3iwj_A          387 MQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSG  466 (503)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGE
T ss_pred             chhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCccc
Confidence            9999999999999999999999999999999999999999999999999999999998433       458999999999


Q ss_pred             CCChhHHHHHHHhhhceEEEEcC
Q psy1099         578 IGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +|+++|.+++++||+.|+|+.+.
T Consensus       467 ~G~~~G~~g~~~f~~~k~v~~~~  489 (503)
T 3iwj_A          467 FGRELGEWGLDNYLSVKQVTQYI  489 (503)
T ss_dssp             ECCBSHHHHHHTTEEEEEEEEEC
T ss_pred             CCCcchHHHHHHhhCeEEEEEeC
Confidence            99999999999999999998753

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=9.2e-60  Score=509.80  Aligned_cols=237  Identities=36%  Similarity=0.550  Sum_probs=220.4

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++. ++||+++|||||||+||++||| +.|+          .|+.|++++|+|||+++
T Consensus       241 v~~I~FTGS~---~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i  315 (497)
T 3i44_A          241 LEMISFTGST---RAGKDISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAI  315 (497)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGG
T ss_pred             cCEEEEeCcH---HHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHH
Confidence            3445789985   999999988876 9999999999999999999999 9886          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCc-ccC--CCCeeEeeEEeecCCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK-RKG--DKGYFIEPTVFSNVTD  503 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~-~~~--~~g~~~~Pti~~~~~~  503 (605)
                      +|+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||. ...  ..|+|++|||+.++++
T Consensus       316 ~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~  395 (497)
T 3i44_A          316 YDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKP  395 (497)
T ss_dssp             HHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCT
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCC
Confidence            9999999999999999999999999999999999999999999999999999999994 322  2699999999999999


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC------CCCcccccCCCC
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESG  577 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~------~~~PfGG~~~SG  577 (605)
                      +|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+++      +.+||||+|.||
T Consensus       396 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~PfGG~k~SG  475 (497)
T 3i44_A          396 HMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSG  475 (497)
T ss_dssp             TSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETTCCCCTTCCBCCSGGGC
T ss_pred             CCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCcCCcCcCc
Confidence            99999999999999999999999999999999999999999999999999999999998443      457999999999


Q ss_pred             CCChhHHHHHHHhhhceEEEE
Q psy1099         578 IGRELGKAALDEYTELKTVTE  598 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~~  598 (605)
                      +|+++|++++++||+.|+|+.
T Consensus       476 ~Gr~~G~~gl~~~t~~K~v~~  496 (497)
T 3i44_A          476 RAREGGLWGIKEFLDTKAISY  496 (497)
T ss_dssp             CCCBSHHHHHHTTEEEEEESC
T ss_pred             CCccchHHHHHHhcceeEEEe
Confidence            999999999999999999863

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=8.9e-60  Score=510.41  Aligned_cols=241  Identities=54%  Similarity=0.838  Sum_probs=224.4

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++.+++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       239 v~~I~FTGS~---~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  315 (501)
T 1bxs_A          239 VDKVAFTGST---EVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI  315 (501)
T ss_dssp             CSEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHH
T ss_pred             cCEEEEECCH---HHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhH
Confidence            3444789985   9999999888834999999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus       316 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~  395 (501)
T 1bxs_A          316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMR  395 (501)
T ss_dssp             HHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSH
T ss_pred             HHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999976444699999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.+++       +.+||||+|.||+|
T Consensus       396 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G  475 (501)
T 1bxs_A          396 IAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNG  475 (501)
T ss_dssp             HHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEES
T ss_pred             HHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcC
Confidence            99999999999999999999999999999999999999999999999999999998332       46899999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEcC
Q psy1099         580 RELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +++|.+++++|++.|+|+.+.
T Consensus       476 ~~~G~~~l~~f~~~K~v~~~~  496 (501)
T 1bxs_A          476 RELGEYGFHEYTEVKTVTIKI  496 (501)
T ss_dssp             CBSHHHHHHTTEEEEEEEEEC
T ss_pred             ccchHHHHHHhhCeeEEEEcc
Confidence            999999999999999998753

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=6.6e-60  Score=511.28  Aligned_cols=242  Identities=53%  Similarity=0.857  Sum_probs=225.1

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++.+++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       238 v~~I~FTGS~---~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  314 (500)
T 1o04_A          238 VDKVAFTGST---EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDI  314 (500)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH
T ss_pred             cCEEEEECCH---HHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhH
Confidence            3445789985   9999999888834999999999999999999999999986          46669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus       315 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~  394 (500)
T 1o04_A          315 YDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMT  394 (500)
T ss_dssp             HHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSH
T ss_pred             HHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCCh
Confidence            99999999999999999999999999999999999999999999999999999999976434699999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.+++       +.+||||+|.||+|
T Consensus       395 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G  474 (500)
T 1o04_A          395 IAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSG  474 (500)
T ss_dssp             HHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEES
T ss_pred             hhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999998432       46899999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEcCC
Q psy1099         580 RELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      +++|.+++++|++.|+|+.+..
T Consensus       475 ~~~G~~gl~~f~~~K~v~~~~~  496 (500)
T 1o04_A          475 RELGEYGLQAYTEVKTVTVKVP  496 (500)
T ss_dssp             CBSTGGGGGGGEEEEEEEEECS
T ss_pred             ccchHHHHHHhcceEEEEEecC
Confidence            9999999999999999987643

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=7.8e-60  Score=510.49  Aligned_cols=238  Identities=30%  Similarity=0.545  Sum_probs=223.9

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ...+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       241 ~~V~FTGS~---~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~  316 (498)
T 4f3x_A          241 GMVSITGDI---ATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIY  316 (498)
T ss_dssp             CEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTH
T ss_pred             CEEEEECCH---HHHHHHHHHHHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHH
Confidence            344789985   999999988876 999999999999999999999999986          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCC-eEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~-~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++|+++++++++|+|.++.+++||++++.+++++.+++++++++|+ ++++||...+..|+|++|||+.+++++|+
T Consensus       317 d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~  396 (498)
T 4f3x_A          317 EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDE  396 (498)
T ss_dssp             HHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSH
T ss_pred             HHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCCh
Confidence            99999999999999999999999999999999999999999999999999 99999986556899999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|++++       +.+||||+|+||+|
T Consensus       397 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G  476 (498)
T 4f3x_A          397 IVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYG  476 (498)
T ss_dssp             HHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEEC
T ss_pred             hhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcC
Confidence            99999999999999999999999999999999999999999999999999999998433       56799999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEc
Q psy1099         580 RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +++|.+++++||+.|+|+.+
T Consensus       477 r~~G~~~l~~~t~~k~v~~~  496 (498)
T 4f3x_A          477 KDMSVYALEDYTAVRHIMIN  496 (498)
T ss_dssp             CBSHHHHHHHTEEEEEEEEE
T ss_pred             ccchHHHHHHhhceEEEEEe
Confidence            99999999999999999875

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=7.9e-60  Score=511.35  Aligned_cols=240  Identities=33%  Similarity=0.540  Sum_probs=221.6

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       228 vd~I~fTGS~---~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  303 (497)
T 3k2w_A          228 TKMITMTGST---VAGKQIYKTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASV  303 (497)
T ss_dssp             EEEEEEESCH---HHHHHHHHHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTT
T ss_pred             cCEEEEECcH---HHHHHHHHHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHH
Confidence            3444789985   999999988876 999999999999999999999999986          45569999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcc--cCC--CCeeEeeEEeecCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGD--KGYFIEPTVFSNVT  502 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~--~~~--~g~~~~Pti~~~~~  502 (605)
                      +|+|+++|++++.++++|+|.++.+++||++++.+++++.+++++++++|+++++||+.  .+.  .|+|++|||+.+++
T Consensus       304 ~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~  383 (497)
T 3k2w_A          304 YDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVK  383 (497)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCC
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCC
Confidence            99999999999999999999999999999999999999999999999999999999973  222  69999999999999


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCC
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKE  575 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~  575 (605)
                      ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|++++       +.+||||+|+
T Consensus       384 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~  463 (497)
T 3k2w_A          384 QDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQ  463 (497)
T ss_dssp             TTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEET
T ss_pred             CCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCC
Confidence            999999999999999999999999999999999999999999999999999999999998433       4589999999


Q ss_pred             CCCCChhHHHHHHHhhhceEEEEcC
Q psy1099         576 SGIGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       576 SG~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      ||+|+++|++++++||+.|+|+.+.
T Consensus       464 SG~G~~~G~~gl~~ft~~k~v~~~~  488 (497)
T 3k2w_A          464 SGFGGEDGKFGLEQYLEKKTVYINE  488 (497)
T ss_dssp             SEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred             CcCCccchHHHHHHhcceEEEEEEc
Confidence            9999999999999999999998754

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=3.8e-59  Score=504.75  Aligned_cols=238  Identities=35%  Similarity=0.596  Sum_probs=222.1

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +..+|||++   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       223 ~~V~fTGS~---~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~  298 (479)
T 2imp_A          223 AMVSMTGSV---SAGEKIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIY  298 (479)
T ss_dssp             EEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGH
T ss_pred             CEEEEeCCH---HHHHHHHHHHhc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhH
Confidence            344688885   999999988875 999999999999999999999999997          345599999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCC-CCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFD-KSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~-~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++|.+++.++++|+|.+ +++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus       299 d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~  378 (479)
T 2imp_A          299 DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMS  378 (479)
T ss_dssp             HHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSG
T ss_pred             HHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCH
Confidence            999999999999999999999 9999999999999999999999999999999999975334699999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.       .+.+||||+|.||+|
T Consensus       379 ~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G  458 (479)
T 2imp_A          379 IMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIG  458 (479)
T ss_dssp             GGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEES
T ss_pred             HHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999833       256899999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEc
Q psy1099         580 RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +++|++++++||+.|+|+.+
T Consensus       459 ~~~g~~~l~~~~~~k~v~~~  478 (479)
T 2imp_A          459 GADGKHGLHEYLQTQVVYLQ  478 (479)
T ss_dssp             CBSHHHHHHTTEEEEEEEEE
T ss_pred             CCchHHHHHHhcCeeEEEec
Confidence            99999999999999999874

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.6e-59  Score=506.53  Aligned_cols=240  Identities=38%  Similarity=0.596  Sum_probs=223.9

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       225 v~~I~FTGS~---~~G~~i~~~aa~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  300 (495)
T 3b4w_A          225 IDMFTFTGSS---AVGREVGRRAAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSR  300 (495)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGG
T ss_pred             cCEEEEeCCH---HHHHHHHHHhhh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccH
Confidence            3445789985   999999988876 999999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~  504 (605)
                      +|+|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||+...  ..|+|++|||+.+++++
T Consensus       301 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~  380 (495)
T 3b4w_A          301 YDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNK  380 (495)
T ss_dssp             HHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTT
T ss_pred             HHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999997643  36999999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC------CCCcccccCCCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGI  578 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~------~~~PfGG~~~SG~  578 (605)
                      |++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.+++      +.+||||+|.||+
T Consensus       381 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~PfGG~k~SG~  460 (495)
T 3b4w_A          381 MTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAFDPGSPFGGYKNSGI  460 (495)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCCCCTTSCBCCSGGGEE
T ss_pred             ChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999433      4689999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcC
Q psy1099         579 GRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+++|++++++||+.|+|+.+.
T Consensus       461 Gr~~G~~gl~~~~~~k~v~~~~  482 (495)
T 3b4w_A          461 GRENGPEGVEHFTQQKSVLLPM  482 (495)
T ss_dssp             SCBSHHHHHHTTEEEEEEECCT
T ss_pred             CccchHHHHHHhcceeEEEEcc
Confidence            9999999999999999998753

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=4.8e-59  Score=504.15  Aligned_cols=238  Identities=34%  Similarity=0.590  Sum_probs=223.4

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       226 ~~I~fTGS~---~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~  301 (481)
T 3jz4_A          226 RKLSFTGST---EIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY  301 (481)
T ss_dssp             EEEEEESCH---HHHHHHHHHHTT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGH
T ss_pred             CEEEEECCH---HHHHHHHHHHhh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHH
Confidence            344689985   999999988876 999999999999999999999999986          466699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|++
T Consensus       302 d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i  381 (481)
T 3jz4_A          302 DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKV  381 (481)
T ss_dssp             HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGG
T ss_pred             HHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999765456899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.+++       +.+||||+|+||+|+
T Consensus       382 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~  461 (481)
T 3jz4_A          382 SKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGR  461 (481)
T ss_dssp             GTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESC
T ss_pred             ccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCC
Confidence            9999999999999999999999999999999999999999999999999999998433       468999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEc
Q psy1099         581 ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~  599 (605)
                      ++|++++++||+.|+|+..
T Consensus       462 ~~g~~g~~~~t~~k~v~~~  480 (481)
T 3jz4_A          462 EGSKYGIEDYLEIKYMCIG  480 (481)
T ss_dssp             BSHHHHHHTTEEEEEEEEE
T ss_pred             CchHHHHHHhhceeEEEEe
Confidence            9999999999999999864

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=5.3e-59  Score=506.50  Aligned_cols=239  Identities=43%  Similarity=0.666  Sum_probs=222.6

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       242 vd~I~FTGS~---~~G~~I~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  317 (515)
T 2d4e_A          242 VPLLTLTGET---ETGKIVMRNAAD-HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKI  317 (515)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHH
T ss_pred             cCEEEEeCcH---HHHHHHHHHHhh-cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhH
Confidence            3444689885   999999988876 999999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--------CCCeeEeeEEe
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--------DKGYFIEPTVF  498 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--------~~g~~~~Pti~  498 (605)
                      +|+|+++|.++++++++|+|.++.+++||++++.+++++++++++++++|+++++||+...        ..|+|++|||+
T Consensus       318 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl  397 (515)
T 2d4e_A          318 FEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVF  397 (515)
T ss_dssp             HHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEE
T ss_pred             HHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEE
Confidence            9999999999999999999999999999999999999999999999999999999997643        26999999999


Q ss_pred             ecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCccc
Q psy1099         499 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFG  571 (605)
Q Consensus       499 ~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfG  571 (605)
                      .+ +++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|++++       +.+|||
T Consensus       398 ~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfG  476 (515)
T 2d4e_A          398 VG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFG  476 (515)
T ss_dssp             EC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBC
T ss_pred             eC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCC
Confidence            99 9999999999999999999999999999999999999999999999999999999999998432       468999


Q ss_pred             ccCCCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099         572 GFKESGIGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       572 G~~~SG~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+|+||+|+++|++++++||+.|+|+.+.
T Consensus       477 G~k~SG~Gr~~G~~gl~~~~~~K~v~~~~  505 (515)
T 2d4e_A          477 GVKGSGDRREGGTYALDFYTDLKTIALPL  505 (515)
T ss_dssp             CSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred             CcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence            99999999999999999999999998753

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-59  Score=510.34  Aligned_cols=241  Identities=29%  Similarity=0.394  Sum_probs=224.0

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc-
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED-  425 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~-  425 (605)
                      .+..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++ 
T Consensus       241 vd~I~FTGS~---~vG~~i~~~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~  316 (521)
T 4e4g_A          241 IAAVSFVGST---PIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEE  316 (521)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHH
T ss_pred             cCEEEEECCH---HHHHHHHHHHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCch
Confidence            3445789985   999999988876 999999999999999999999999986          4666999999999999 


Q ss_pred             cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc----CCCCeeEeeEEeecC
Q psy1099         426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK----GDKGYFIEPTVFSNV  501 (605)
Q Consensus       426 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~----~~~g~~~~Pti~~~~  501 (605)
                      ++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...    ...|+|++|||+.++
T Consensus       317 i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v  396 (521)
T 4e4g_A          317 TANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDV  396 (521)
T ss_dssp             HHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESC
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcC
Confidence            9999999999999999999999999999999999999999999999999999999999642    247999999999999


Q ss_pred             CCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCccccc
Q psy1099         502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGF  573 (605)
Q Consensus       502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~  573 (605)
                      +++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.++        .+.+||||+
T Consensus       397 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~  476 (521)
T 4e4g_A          397 TPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGW  476 (521)
T ss_dssp             CTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCE
T ss_pred             CCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCc
Confidence            999999999999999999999999999999999999999999999999999999999999832        245899999


Q ss_pred             CCCCCC--ChhHHHHHHHhhhceEEEEcCC
Q psy1099         574 KESGIG--RELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       574 ~~SG~G--~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      |.||+|  +++|++++++||+.|+|+.+..
T Consensus       477 k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~  506 (521)
T 4e4g_A          477 KSSSFGDLNQHGTDSIKFWTRTKTITSRWP  506 (521)
T ss_dssp             ETTEESSCCBSHHHHHHHTEEEEEEEECCC
T ss_pred             ccCCCCCCccchHHHHHHhheEEEEEEecC
Confidence            999999  7999999999999999998643

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=4.6e-59  Score=505.59  Aligned_cols=240  Identities=38%  Similarity=0.655  Sum_probs=223.5

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       234 v~~V~FTGS~---~~G~~i~~~aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  309 (503)
T 1a4s_A          234 VAKVSFTGSV---PTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREI  309 (503)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGG
T ss_pred             cCEEEEeCCH---HHHHHHHHHhhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHH
Confidence            3445789985   999999988875 999999999999999999999999997          45559999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc--C----CCCeeEeeEEeec
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK--G----DKGYFIEPTVFSN  500 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~--~----~~g~~~~Pti~~~  500 (605)
                      +|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||+..  +    ..|+|++|||+.+
T Consensus       310 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~  389 (503)
T 1a4s_A          310 MPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDN  389 (503)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEES
T ss_pred             HHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEec
Confidence            999999999999999999999999999999999999999999999999999999999764  2    3699999999999


Q ss_pred             CCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCccccc
Q psy1099         501 VTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGF  573 (605)
Q Consensus       501 ~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~  573 (605)
                      ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.+++       +.+||||+
T Consensus       390 v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~  469 (503)
T 1a4s_A          390 CRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGY  469 (503)
T ss_dssp             CCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCS
T ss_pred             CCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999998432       46899999


Q ss_pred             CCCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099         574 KESGIGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       574 ~~SG~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+||+|+++|++++++||+.|+|+.+.
T Consensus       470 k~SG~G~~~G~~~l~~f~~~k~v~~~~  496 (503)
T 1a4s_A          470 KMSGFGRENGQATVDYYSQLKTVIVEM  496 (503)
T ss_dssp             GGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred             CCCCCCccchHHHHHHhcCceEEEEcc
Confidence            999999999999999999999998764

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.5e-59  Score=509.89  Aligned_cols=240  Identities=41%  Similarity=0.664  Sum_probs=222.6

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----h------cccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----Y------YCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~------~~~c~a~~~v~v~~~~~  427 (605)
                      +..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+    +      |+.|++++|+|||++++
T Consensus       230 d~I~FTGS~---~~G~~i~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~  305 (517)
T 3r31_A          230 AKVSLTGSV---PTGRKVAAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAK  305 (517)
T ss_dssp             EEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGH
T ss_pred             CEEeccCCH---HHHHHHHHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHH
Confidence            344789985   999999988876 999999999999999999999999997    3      33499999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCeeEeeEEeecCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~---~~g~~~~Pti~~~~~~~  504 (605)
                      |+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||...+   ..|+|++|||+.+++++
T Consensus       306 d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~  385 (517)
T 3r31_A          306 ARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDD  385 (517)
T ss_dssp             HHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTT
T ss_pred             HHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCC
Confidence            999999999999999999999999999999999999999999999999999999993121   37999999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESG  577 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG  577 (605)
                      |++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|++.       .+.+||||+|.||
T Consensus       386 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG  465 (517)
T 3r31_A          386 MTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSG  465 (517)
T ss_dssp             SHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTE
T ss_pred             CccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCC
Confidence            999999999999999999999999999999999999999999999999999999999843       3567999999999


Q ss_pred             CCChhHHHHHHHhhhceEEEEcCC
Q psy1099         578 IGRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      +|+++|++++++||+.|+|+.+..
T Consensus       466 ~Gr~~G~~gl~~ft~~K~v~~~~~  489 (517)
T 3r31_A          466 FGRENSAAALEHYSELKTVYVSTG  489 (517)
T ss_dssp             ECCBSTGGGGGGSEEEEEEEECCC
T ss_pred             CCcCchHHHHHHhhceEEEEEcCC
Confidence            999999999999999999987653

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=4e-59  Score=508.95  Aligned_cols=239  Identities=36%  Similarity=0.568  Sum_probs=222.7

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhcc------ccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEE
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASN------LKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTY  421 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~------~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~  421 (605)
                      +..+||||+   .+|+.|++.++. +      +||+++|||||||+||++|||++.|+          .|+.|++++|+|
T Consensus       253 ~~I~FTGS~---~~G~~i~~~aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvl  328 (538)
T 3qan_A          253 SLITFTGSK---DVGVRLYERAAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAV  328 (538)
T ss_dssp             EEEEEESCH---HHHHHHHHHHTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEE
T ss_pred             CEEEEECCH---HHHHHHHHHhhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeE
Confidence            344689985   999999988775 7      99999999999999999999999986          466699999999


Q ss_pred             EecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecC
Q psy1099         422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNV  501 (605)
Q Consensus       422 v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~  501 (605)
                      ||++++|+|+++|.+++.++++|+|.++++++||++++.+++++.+++++++++| ++++||...+..|+|++|||+.++
T Consensus       329 V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v  407 (538)
T 3qan_A          329 IHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADL  407 (538)
T ss_dssp             EETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESC
T ss_pred             EehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecC
Confidence            9999999999999999999999999999999999999999999999999999999 999999875447999999999999


Q ss_pred             CCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccc
Q psy1099         502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGG  572 (605)
Q Consensus       502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG  572 (605)
                      +++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+++         .+.+||||
T Consensus       408 ~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG  487 (538)
T 3qan_A          408 DPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGG  487 (538)
T ss_dssp             CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCC
T ss_pred             CCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCC
Confidence            999999999999999999999999999999999999999999999999999999999999833         34579999


Q ss_pred             cCCCCCC-ChhHHHHHHHhhhceEEEEcCC
Q psy1099         573 FKESGIG-RELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       573 ~~~SG~G-~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      +|.||+| +++|++++++||+.|+|+.+..
T Consensus       488 ~k~SG~G~~~~G~~gl~~ft~~k~v~~~~~  517 (538)
T 3qan_A          488 FKMSGTDSKAGGPDYLALHMQAKTVSEMYA  517 (538)
T ss_dssp             EETTBSCCCBTSTTTGGGGEEEEEEEEEC-
T ss_pred             cCcCCCCcccccHHHHHHhhCeEEEEEecC
Confidence            9999999 9999999999999999987543

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=7.6e-59  Score=502.41  Aligned_cols=237  Identities=32%  Similarity=0.550  Sum_probs=221.8

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       239 d~I~FTGS~---~~G~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~  314 (495)
T 1wnd_A          239 RMVSLTGSI---ATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY  314 (495)
T ss_dssp             EEEEEESCH---HHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTH
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhH
Confidence            344688885   999999988876 999999999999999999999999987          455699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcC-CeEEeCCc-ccCCCCeeEeeEEeecCCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQG-GKLEAGGK-RKGDKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g-~~v~~gg~-~~~~~g~~~~Pti~~~~~~~~  505 (605)
                      |+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++| +++++||+ .. ..|+|++|||+.+++++|
T Consensus       315 d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~  393 (495)
T 1wnd_A          315 DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDD  393 (495)
T ss_dssp             HHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTS
T ss_pred             HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCC
Confidence            9999999999999999999999999999999999999999999999999 99999997 43 369999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI  578 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~  578 (605)
                      ++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.+++       +.+||||+|.||+
T Consensus       394 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~  473 (495)
T 1wnd_A          394 AIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGY  473 (495)
T ss_dssp             HHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEE
T ss_pred             hhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcC
Confidence            999999999999999999999999999999999999999999999999999999998432       5689999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEc
Q psy1099         579 GRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+++|++++++||+.|+|+.+
T Consensus       474 Gr~~G~~gl~~f~~~k~v~~~  494 (495)
T 1wnd_A          474 GKDMSLYGLEDYTVVRHVMVK  494 (495)
T ss_dssp             CCBSHHHHHHTTEEEEEEEEE
T ss_pred             CccchHHHHHHhhCeEEEEec
Confidence            999999999999999999864

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=5.4e-59  Score=504.78  Aligned_cols=235  Identities=30%  Similarity=0.445  Sum_probs=219.0

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++   +||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       232 vd~I~FTGS~---~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  305 (505)
T 3prl_A          232 IDMITFTGGT---TTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSV  305 (505)
T ss_dssp             CCEEEEESCH---HHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHH
T ss_pred             CCEEEEeCCH---HHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHH
Confidence            3445789985   99999987665   89999999999999999999999986          45569999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|.+++.++++|+|. +++++||++++.+++++.+++++++++|+++++||+.   .|+|++|||+.+++++|+
T Consensus       306 ~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~  381 (505)
T 3prl_A          306 ADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMR  381 (505)
T ss_dssp             HHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSG
T ss_pred             HHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCCh
Confidence            999999999999999999999 9999999999999999999999999999999999974   689999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGI  578 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~  578 (605)
                      +++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|++.        .+.+||||+|.||+
T Consensus       382 i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~  461 (505)
T 3prl_A          382 VAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGL  461 (505)
T ss_dssp             GGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEE
T ss_pred             hhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCC
Confidence            9999999999999999999999999999999999999999999999999999999832        35689999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcCC
Q psy1099         579 GRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      |+++|++++++||+.|+|+.+..
T Consensus       462 Gr~~g~~~~~~f~~~k~v~~~~~  484 (505)
T 3prl_A          462 GVQGIKPSLLSMTRERVTVLNLA  484 (505)
T ss_dssp             SCBSHHHHHHHTEEEEEEEEEC-
T ss_pred             CcCccHHHHHHhhceEEEEEeCC
Confidence            99999999999999999987543

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=8.2e-59  Score=500.71  Aligned_cols=238  Identities=33%  Similarity=0.529  Sum_probs=225.1

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       207 ~v~fTGS~---~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d  282 (462)
T 3etf_A          207 AVTVTGSV---RAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQ  282 (462)
T ss_dssp             EEEEESCH---HHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHH
T ss_pred             EEEEeCCc---hHHHHHHHHHhc-cCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHH
Confidence            34688986   999999988886 999999999999999999999999986          4566999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|.+++.++++|+|.++.+++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|+++
T Consensus       283 ~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~  362 (462)
T 3etf_A          283 AFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAF  362 (462)
T ss_dssp             HHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHH
T ss_pred             HHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999998655689999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCCh
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRE  581 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~~  581 (605)
                      +||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|++++       +.+||||+|.||+|++
T Consensus       363 ~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~  442 (462)
T 3etf_A          363 RQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRE  442 (462)
T ss_dssp             HSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCB
T ss_pred             cCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCcc
Confidence            999999999999999999999999999999999999999999999999999999443       4689999999999999


Q ss_pred             hHHHHHHHhhhceEEEEcC
Q psy1099         582 LGKAALDEYTELKTVTESP  600 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~~~~  600 (605)
                      +|++++++||+.|+|+.++
T Consensus       443 ~g~~g~~~~~~~k~v~~~r  461 (462)
T 3etf_A          443 LSHFGLHEFCNVQTVWKNR  461 (462)
T ss_dssp             SHHHHHHTTEEEEEEEECC
T ss_pred             chHHHHHHHhceeEEEEec
Confidence            9999999999999999875

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=1.6e-58  Score=498.78  Aligned_cols=235  Identities=34%  Similarity=0.539  Sum_probs=217.8

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++   +||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       214 vd~V~fTGS~---~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  287 (486)
T 3pqa_A          214 VNMISFTGSS---KVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESI  287 (486)
T ss_dssp             CCEEEEESCH---HHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGG
T ss_pred             ccEEEEECCh---HHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHH
Confidence            3445789985   99999987664   89999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|.+++.++++|+|.++++++||+++..+++++.+++++++++|+++++||..   .|+|++|||+ +++++|+
T Consensus       288 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~  363 (486)
T 3pqa_A          288 ADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNI  363 (486)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSG
T ss_pred             HHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCCh
Confidence            99999999999999999999999999999999999999999999999999999999975   5899999999 9999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGI  578 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~  578 (605)
                      +++||+||||++|++|+| +|||+++|+++|||++||||+|.++++++++++++|++.        .+.+||||+|+||+
T Consensus       364 i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~  442 (486)
T 3pqa_A          364 LCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGL  442 (486)
T ss_dssp             GGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEE
T ss_pred             hhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcC
Confidence            999999999999999999 999999999999999999999999999999999999832        23679999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcCCC
Q psy1099         579 GRELGKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~~~  602 (605)
                      |+++|++++++||+.|+|+.+...
T Consensus       443 Gr~~g~~gl~~f~~~k~v~~~~~~  466 (486)
T 3pqa_A          443 GREGVKYAMEEMSNIKTIIISKAE  466 (486)
T ss_dssp             SCBSHHHHHHHTEEEEEEEEEC--
T ss_pred             CCCCcHHHHHHhhceEEEEEcCCc
Confidence            999999999999999999876543

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=4.7e-58  Score=493.52  Aligned_cols=232  Identities=29%  Similarity=0.432  Sum_probs=216.3

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       199 ~I~FTGS~---~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d  274 (469)
T 3sza_A          199 HILYTGST---GVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQN  274 (469)
T ss_dssp             EEEEESCH---HHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHH
T ss_pred             EEEEECCH---HHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHH
Confidence            44789985   999999988876 999999999999999999999999986          4556999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|.+++.++ +|+|.++++++||++++.+++++++++     +|+++++||... ..|+|++|||+.+++++|+++
T Consensus       275 ~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~  347 (469)
T 3sza_A          275 QIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVM  347 (469)
T ss_dssp             HHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGG
T ss_pred             HHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhh
Confidence            9999999999988 699999999999999999999999998     589999999864 479999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFKESGIG  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~~SG~G  579 (605)
                      +||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+++         .+.+||||+|.||+|
T Consensus       348 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~G  427 (469)
T 3sza_A          348 QEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMG  427 (469)
T ss_dssp             TSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEEC
T ss_pred             hccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccC
Confidence            99999999999999999999999999999999999999999999999999999833         246799999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEcCC
Q psy1099         580 RELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      +++|.+++++||+.|+|+.+++
T Consensus       428 r~~G~~g~~~ft~~K~v~~~~~  449 (469)
T 3sza_A          428 SYHGKKSFETFSHRRSCLVRPL  449 (469)
T ss_dssp             CBSTHHHHHHTEEEEEEEECCS
T ss_pred             ccchHHHHHHhhCeeEEEECCc
Confidence            9999999999999999998865

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=2e-58  Score=499.10  Aligned_cols=239  Identities=36%  Similarity=0.537  Sum_probs=223.1

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+|||++   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       229 v~~V~fTGS~---~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  304 (487)
T 2w8n_A          229 VSKISFTGST---TTGKILLHHAAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI  304 (487)
T ss_dssp             EEEEEEEECH---HHHHHHHHHHHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHH
T ss_pred             cCEEEEeCCH---HHHHHHHHHHhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccH
Confidence            3445789985   999999988875 999999999999999999999999987          35559999999999999


Q ss_pred             HHHHHHHHHHHHhh-cccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCe-eEeeEEeecCCCC
Q psy1099         427 YDTFVKKAVEKAAA-RKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY-FIEPTVFSNVTDD  504 (605)
Q Consensus       427 ~~~~~~~l~~~~~~-~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~-~~~Pti~~~~~~~  504 (605)
                      +|+|+++|.+++.+ +++|+|.++++++||++++.+++++++++++++++|+++++||+.. ..|+ |++|||+.+++++
T Consensus       305 ~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~  383 (487)
T 2w8n_A          305 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQD  383 (487)
T ss_dssp             HHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGG
T ss_pred             HHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCc
Confidence            99999999999999 9999999999999999999999999999999999999999999764 3689 9999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG  577 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG  577 (605)
                      |++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+++       +.+||||+|.||
T Consensus       384 ~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG  463 (487)
T 2w8n_A          384 MLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSG  463 (487)
T ss_dssp             GGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGE
T ss_pred             chhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998433       468999999999


Q ss_pred             CCChhHHHHHHHhhhceEEEEcC
Q psy1099         578 IGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +|+++|++++++||+.|+|+.+.
T Consensus       464 ~G~~~G~~~l~~f~~~k~v~~~~  486 (487)
T 2w8n_A          464 LGREGSKYGIDEYLELKYVCYGG  486 (487)
T ss_dssp             ESCBSTTTGGGGGEEEEEEEECC
T ss_pred             cCCCchHHHHHHhcCccEEEEec
Confidence            99999999999999999998764

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.3e-57  Score=495.40  Aligned_cols=238  Identities=32%  Similarity=0.504  Sum_probs=208.7

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhc--cccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAAS--NLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED  425 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~--~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~  425 (605)
                      +...||||+   .+|+.|++.++ +  ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++
T Consensus       230 d~I~fTGS~---~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~  305 (508)
T 3r64_A          230 KLISFTGST---PVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAA  305 (508)
T ss_dssp             SEEEEESCH---HHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHH
T ss_pred             cEEEEECCH---HHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehh
Confidence            344688885   99999987765 4  799999999999999999999999986          4566999999999999


Q ss_pred             cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCC
Q psy1099         426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       426 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~  505 (605)
                      ++|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||..   .|+|++|||+.+++++|
T Consensus       306 i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~  382 (508)
T 3r64_A          306 VHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDM  382 (508)
T ss_dssp             HHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTS
T ss_pred             HHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999975   68999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESG  577 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG  577 (605)
                      ++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.        .+.+||||+|.||
T Consensus       383 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG  462 (508)
T 3r64_A          383 EIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSG  462 (508)
T ss_dssp             GGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC------------------
T ss_pred             hhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999833        3457999999999


Q ss_pred             CCChhHHHHHHHhhhceEEEEcCCC
Q psy1099         578 IGRELGKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       578 ~G~~~g~~~~~~~~~~k~v~~~~~~  602 (605)
                      +|+++|++++++||+.|+|+.+...
T Consensus       463 ~Gr~~G~~~l~~ft~~k~v~~~~~~  487 (508)
T 3r64_A          463 LGRFNGDWAIEEFTTDRWIGIKRSA  487 (508)
T ss_dssp             --CCCHHHHHHHTEEEEEEEEECCS
T ss_pred             CCcCccHHHHHHhhceEEEEEeccc
Confidence            9999999999999999999876543

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=1.1e-57  Score=492.64  Aligned_cols=239  Identities=27%  Similarity=0.441  Sum_probs=223.6

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ..+||+|+   .+|+.+++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       205 ~v~FTGS~---~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d  280 (474)
T 4h7n_A          205 FVCFTGSV---ATGREVAETAAR-RFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFE  280 (474)
T ss_dssp             EEEEESCH---HHHHHHHHHHHH-HTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHH
T ss_pred             eEEecccc---chhhhhhhhhhc-ccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHH
Confidence            34789985   999999988876 999999999999999999999999986          5666999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCeeEeeEEeecCCCCCcc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-~~g~~~~Pti~~~~~~~~~~  507 (605)
                      +|++++.+++.++++|+|.++++++||++++.+++++.+++++++++|++++.||...+ ..|+|++|||+.+++++|++
T Consensus       281 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i  360 (474)
T 4h7n_A          281 EFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKV  360 (474)
T ss_dssp             HHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGG
T ss_pred             HHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeecccccc
Confidence            99999999999999999999999999999999999999999999999999999997543 46899999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGI  578 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~SG~  578 (605)
                      ++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|++.+         +..||||+|.||+
T Consensus       361 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~  440 (474)
T 4h7n_A          361 MTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGL  440 (474)
T ss_dssp             GTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEE
T ss_pred             ccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999443         3579999999999


Q ss_pred             C-ChhHHHHHHHhhhceEEEEcCC
Q psy1099         579 G-RELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       579 G-~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      | +++|.+++++||+.|+|+++..
T Consensus       441 G~~~~G~~g~~~f~~~k~v~~~~~  464 (474)
T 4h7n_A          441 GGSRVGAAGLKRFLRKQAFLIKTN  464 (474)
T ss_dssp             SCCSSTTHHHHTTEEEEEEEEECS
T ss_pred             CCCcchHHHHHHhCeEEEEEECCC
Confidence            8 7899999999999999987654

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=6.7e-58  Score=496.59  Aligned_cols=239  Identities=28%  Similarity=0.447  Sum_probs=222.6

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+...||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       240 vd~I~FTGS~---~~g~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  315 (500)
T 2j6l_A          240 VNLLSFTGST---QVGKQVGLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESI  315 (500)
T ss_dssp             CSEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTT
T ss_pred             cCEEEEECCH---HHHHHHHHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHH
Confidence            3445789885   999999988876 999999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus       316 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~  395 (500)
T 2j6l_A          316 HDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDAS  395 (500)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCH
T ss_pred             HHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcCh
Confidence            99999999999999999999999999999999999999999999999999999999976445699999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHH--HHcccCcccC--------CCCcccccCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA--HAINAGSAVV--------PQAPFGGFKES  576 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~--~~~~~G~~~~--------~~~PfGG~~~S  576 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++++  .++++|.+++        +.+||||+|.|
T Consensus       396 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~S  475 (500)
T 2j6l_A          396 IAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHT  475 (500)
T ss_dssp             HHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGG
T ss_pred             hhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCC
Confidence            9999999999999999999999999999999999999999999999999  7799998332        45799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEEc
Q psy1099         577 GIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+|+++|.+++++|++.|+|+.+
T Consensus       476 G~G~~~g~~~~~~f~~~k~v~~~  498 (500)
T 2j6l_A          476 GGGRESGSDAWKQYMRRSTCTIN  498 (500)
T ss_dssp             CSCCEESTTGGGGGEEEEEEEEE
T ss_pred             CCCCcchHHHHHHhhceEEEEEe
Confidence            99999999999999999999874

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=1.2e-57  Score=496.39  Aligned_cols=238  Identities=35%  Similarity=0.534  Sum_probs=218.9

Q ss_pred             cceeEEEecCCccccHHHHHHHHHh-----ccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEE
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAA-----SNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTY  421 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~-----~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~  421 (605)
                      .+..+||||+   .+|+.|++.++.     +++||+++|||||||+||++|||++.|+          .|+.|++++|+|
T Consensus       253 v~~I~FTGS~---~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvl  329 (516)
T 1uzb_A          253 IRFINFTGSL---EVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLI  329 (516)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEE
T ss_pred             cCEEEecCCH---HHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEE
Confidence            3445788885   999999988771     4899999999999999999999999986          456699999999


Q ss_pred             EecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecC
Q psy1099         422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNV  501 (605)
Q Consensus       422 v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~  501 (605)
                      ||++++|+|+++|.+++.++++|+| ++++++||++++.+++++++++++++++| ++++||...+..|+|++|||+.++
T Consensus       330 V~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v  407 (516)
T 1uzb_A          330 LTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEV  407 (516)
T ss_dssp             EEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESC
T ss_pred             EchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECC
Confidence            9999999999999999999999999 99999999999999999999999999988 899999753346999999999999


Q ss_pred             CCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccc
Q psy1099         502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGG  572 (605)
Q Consensus       502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG  572 (605)
                      +++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++         +.+||||
T Consensus       408 ~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG  487 (516)
T 1uzb_A          408 PPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGG  487 (516)
T ss_dssp             CTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCC
T ss_pred             CCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999998332         3579999


Q ss_pred             cCCCCCCC-hhHHHHHHHhhhceEEEEc
Q psy1099         573 FKESGIGR-ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       573 ~~~SG~G~-~~g~~~~~~~~~~k~v~~~  599 (605)
                      +|.||+|+ ++|.+++++||+.|+|+.+
T Consensus       488 ~k~SG~G~~~~g~~~l~~f~~~k~v~~~  515 (516)
T 1uzb_A          488 FKLSGTNAKTGALDYLRLFLEMKAVAER  515 (516)
T ss_dssp             SGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred             cCcCCCCCccchHHHHHHcCCeeEEEec
Confidence            99999995 6889999999999999864

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=5.3e-58  Score=496.05  Aligned_cols=237  Identities=42%  Similarity=0.722  Sum_probs=199.4

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      ....||||.   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       220 ~~v~fTGS~---~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~  295 (478)
T 3ty7_A          220 RMMSFTGSG---PTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIK  295 (478)
T ss_dssp             CEEEECSCH---HHHCC--CSTTT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTH
T ss_pred             CEEEEECcH---HHHHHHHHHHHh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHH
Confidence            344678875   889888877765 899999999999999999999999986          456699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc-C--CCCeeEeeEEeecCCCC
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK-G--DKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~-~--~~g~~~~Pti~~~~~~~  504 (605)
                      |+|+++|.+++.++++|+|.++.+++||+++..+++++++++++++++|+++++||... +  ..|+|++|||+.+++++
T Consensus       296 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~  375 (478)
T 3ty7_A          296 DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQ  375 (478)
T ss_dssp             HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTT
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCC
Confidence            99999999999999999999999999999999999999999999999999999999432 1  47999999999999999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC------CCCcccccCCCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGI  578 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~------~~~PfGG~~~SG~  578 (605)
                      |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|++.+      +.+||||+|.||+
T Consensus       376 ~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~PfGG~k~SG~  455 (478)
T 3ty7_A          376 MTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDLPFGGYKQSGL  455 (478)
T ss_dssp             SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETTCC---------------
T ss_pred             CcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCcCCcCcCcC
Confidence            9999999999999999999999999999999999999999999999999999999998443      4579999999999


Q ss_pred             CChhHHHHHHHhhhceEEEE
Q psy1099         579 GRELGKAALDEYTELKTVTE  598 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~  598 (605)
                      |+++|++++++||+.|+|+.
T Consensus       456 G~~~G~~~l~~~t~~k~v~~  475 (478)
T 3ty7_A          456 GREWGDYGIEEFLEVKSIAG  475 (478)
T ss_dssp             -------CCGGGEEEEEEET
T ss_pred             CccchHHHHHHhcCeEEEEE
Confidence            99999999999999999984

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=1.2e-57  Score=494.17  Aligned_cols=235  Identities=28%  Similarity=0.462  Sum_probs=219.6

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++   +||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       236 vd~I~FTGS~---~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i  309 (501)
T 1uxt_A          236 VAAVSFTGST---EVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPV  309 (501)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHH
T ss_pred             cCEEEEeCcH---HHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccch
Confidence            3444789985   99999987765   89999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCC-eeEeeEEeecCC---
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG-YFIEPTVFSNVT---  502 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g-~~~~Pti~~~~~---  502 (605)
                      +|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||+.   .| +|++|||+.+++   
T Consensus       310 ~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~  386 (501)
T 1uxt_A          310 YGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRV  386 (501)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999975   58 999999999999   


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccC
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFK  574 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~  574 (605)
                      ++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+        +.+||||+|
T Consensus       387 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k  466 (501)
T 1uxt_A          387 KDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRK  466 (501)
T ss_dssp             TTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEE
T ss_pred             CcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcC
Confidence            999999999999999999999999999999999999999999999999999999999998322        457999999


Q ss_pred             CCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099         575 ESGIGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       575 ~SG~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +||+|+++|++++++||+.|+|+.+.
T Consensus       467 ~SG~G~~~G~~~l~~f~~~k~v~~~~  492 (501)
T 1uxt_A          467 KSGVFREGIGYAVEAVTAYKTIVFNY  492 (501)
T ss_dssp             TTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred             CCCCCccChHHHHHHhCceeEEEEec
Confidence            99999999999999999999998764

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=2e-57  Score=490.80  Aligned_cols=233  Identities=31%  Similarity=0.445  Sum_probs=217.9

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+..+||||+   .+|+.|++.++   +||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       223 v~~V~fTGS~---~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i  296 (475)
T 1euh_A          223 VNFINFTGST---GIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV  296 (475)
T ss_dssp             CCEEEEESCH---HHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHH
T ss_pred             cCEEEEECch---HHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhH
Confidence            3445788885   99999987665   89999999999999999999999986          45669999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|.+++.++++|+|.+ ++++||++++.+++++.+++++++++|+++++||+.   .|+|++|||+.+++++|+
T Consensus       297 ~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~  372 (475)
T 1euh_A          297 ADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMR  372 (475)
T ss_dssp             HHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSG
T ss_pred             HHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCH
Confidence            9999999999999999999999 999999999999999999999999999999999975   589999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGI  578 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~  578 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+        +.+||||+|.||+
T Consensus       373 ~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~  452 (475)
T 1euh_A          373 LAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGA  452 (475)
T ss_dssp             GGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEE
T ss_pred             HHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999998433        3579999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEc
Q psy1099         579 GRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |+++|++++++||+.|+|+.+
T Consensus       453 G~~~g~~~~~~~~~~k~v~~~  473 (475)
T 1euh_A          453 GIQGVKYSIEAMTTVKSVVFD  473 (475)
T ss_dssp             SCBSHHHHHHHTEEEEEEEEE
T ss_pred             CCCccHHHHHHhCCeeEEEEe
Confidence            999999999999999999875

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=2.9e-57  Score=490.36  Aligned_cols=238  Identities=32%  Similarity=0.480  Sum_probs=221.1

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCe-EEEeccc
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSR-TYVQEDI  426 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~-v~v~~~~  426 (605)
                      +..+||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++| +|||++ 
T Consensus       221 ~~I~fTGS~---~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-  295 (486)
T 1t90_A          221 KAISFVGSK---PVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-  295 (486)
T ss_dssp             EEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-
T ss_pred             CEEEEeCCH---HHHHHHHHHHhc-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-
Confidence            344688885   999999988876 999999999999999999999999986          4666999999 999999 


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc-CCCCeeEeeEEeecCCCCC
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK-GDKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~-~~~g~~~~Pti~~~~~~~~  505 (605)
                      +|+|+++|.++++++++|+|.++++++||+++..+++++.+++++++++|+++++||+.. ...|+|++|||+.+++++|
T Consensus       296 ~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~  375 (486)
T 1t90_A          296 ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEM  375 (486)
T ss_dssp             HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTS
T ss_pred             HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999742 2369999999999999999


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESG  577 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG  577 (605)
                      ++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.++        .+.+||||+|.||
T Consensus       376 ~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG  455 (486)
T 1t90_A          376 TIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSF  455 (486)
T ss_dssp             HHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTE
T ss_pred             HhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999832        2457999999999


Q ss_pred             CC--ChhHHHHHHHhhhceEEEEcC
Q psy1099         578 IG--RELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       578 ~G--~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      +|  +++|++++++||+.|+|+.+.
T Consensus       456 ~G~~~~~g~~g~~~~~~~k~v~~~~  480 (486)
T 1t90_A          456 FGTLHANGKDSVDFYTRKKVVTARY  480 (486)
T ss_dssp             ESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred             CCCCccchHHHHHHhhceEEEEEec
Confidence            99  899999999999999998764

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.9e-57  Score=492.66  Aligned_cols=237  Identities=34%  Similarity=0.520  Sum_probs=203.7

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .....|||++   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       224 v~~v~fTGS~---~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i  299 (485)
T 4dng_A          224 PRLISFTGST---AVGRHIGEIAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDV  299 (485)
T ss_dssp             CSEEEEEECH---HHHHHHHHHHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHH
T ss_pred             CCEEEEECCc---HHHHHHHHHHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHH
Confidence            3445789996   999999988876 999999999999999999999999986          34459999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      +|+|+++|.+++.++++|+|.++.+++||+++..+++++++++++++++|+++++||..   .|+|++|||+.+++++|+
T Consensus       300 ~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~  376 (485)
T 4dng_A          300 YDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSK  376 (485)
T ss_dssp             HHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSH
T ss_pred             HHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCCh
Confidence            99999999999999999999999999999999999999999999999999999999975   699999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGI  578 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~  578 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.++        .+.+||||+|.||+
T Consensus       377 i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~  456 (485)
T 4dng_A          377 IAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGV  456 (485)
T ss_dssp             HHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------------
T ss_pred             hhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999833        34579999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcC
Q psy1099         579 GRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+++|++++++||+.|+|+.+.
T Consensus       457 G~~~g~~~l~~~t~~k~v~~~~  478 (485)
T 4dng_A          457 GRFGNPWVVEEFTVTKWISIQK  478 (485)
T ss_dssp             ----CHHHHHHHEEEEEEEEEC
T ss_pred             CccchHHHHHHhhceEEEEEec
Confidence            9999999999999999998754

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=2e-56  Score=488.45  Aligned_cols=238  Identities=27%  Similarity=0.396  Sum_probs=220.1

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhcccc------ceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEE
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLK------RVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTY  421 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~------~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~  421 (605)
                      ...+||||+   .+|+.|++.++. ++|      |+++|||||||+||++|||++.|+          .|+.|++++|+|
T Consensus       280 ~~I~FTGSt---~vG~~i~~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~  355 (563)
T 4e3x_A          280 CGINFTGSV---PTFKHLWRQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLY  355 (563)
T ss_dssp             EEEEEESCH---HHHHHHHHHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEE
T ss_pred             CEEEEECCH---HHHHHHHHHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEE
Confidence            344789985   999999988886 887      499999999999999999999986          456699999999


Q ss_pred             EecccHHHHHHHHHHHHhhcccCCC-CCCCCCCCcccCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCeeEeeEEee
Q psy1099         422 VQEDIYDTFVKKAVEKAAARKVGDP-FDKSVQQGPQVDAEMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFS  499 (605)
Q Consensus       422 v~~~~~~~~~~~l~~~~~~~~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~g~~v~~gg~~~~~~g~~~~Pti~~  499 (605)
                      ||++++|+|+++|+++++++++|+| .++.+++||+|++.+++++.++++++++ .|+++++||...+..|+|++|||+.
T Consensus       356 V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~  435 (563)
T 4e3x_A          356 VPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIE  435 (563)
T ss_dssp             EEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEE
T ss_pred             EecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEe
Confidence            9999999999999999999999999 9999999999999999999999999996 7999999998766689999999999


Q ss_pred             cCCCCCcccccceeeeeeeeEeeCC--HHHHHHHh-hcCCCCceEEEEcCCHHHHHHHHHHcc--cCccc---------C
Q psy1099         500 NVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERA-NDTKYGLASGIVTTNIDTANTFAHAIN--AGSAV---------V  565 (605)
Q Consensus       500 ~~~~~~~~~~eE~FGPvl~i~~~~~--~~eai~~~-n~~~~gL~a~vft~d~~~~~~~~~~~~--~G~~~---------~  565 (605)
                      +++++|++++||+||||++|++|+|  ++|||+++ |.++|||+++|||+|.+.+++++++++  +|.+.         .
T Consensus       436 ~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~  515 (563)
T 4e3x_A          436 SKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVV  515 (563)
T ss_dssp             ESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCT
T ss_pred             cCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCc
Confidence            9999999999999999999999997  79999999 789999999999999999999999976  89833         2


Q ss_pred             CCCcccccCCCCCC-ChhHHHHHHHhhhceEEEEc
Q psy1099         566 PQAPFGGFKESGIG-RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       566 ~~~PfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +.+||||+|.||+| +.+|+++++.|++.|+|..+
T Consensus       516 ~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~  550 (563)
T 4e3x_A          516 GQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET  550 (563)
T ss_dssp             TTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE
T ss_pred             CCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe
Confidence            45799999999998 89999999999999999875

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=1.3e-55  Score=474.36  Aligned_cols=229  Identities=28%  Similarity=0.430  Sum_probs=211.0

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||||+   .+|+.|++.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       209 ~V~fTGS~---~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d  284 (457)
T 3lns_A          209 FIFFTGSP---NVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKD  284 (457)
T ss_dssp             EEEEESCH---HHHHHHHHHHHT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHH
T ss_pred             EEEEECCH---HHHHHHHHHHhh-ccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHH
Confidence            34688885   999999988876 999999999999999999999999986          4566999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|+++|++++.+++   |.++  ++||++++.++++++++++++   ++++++||... ..|+|++|||+.+++++|+++
T Consensus       285 ~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~  355 (457)
T 3lns_A          285 ALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLM  355 (457)
T ss_dssp             HHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGG
T ss_pred             HHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhh
Confidence            99999999999987   6665  999999999999999999986   36999999753 369999999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhc-CCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERAND-TKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFKESGI  578 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~-~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~~SG~  578 (605)
                      +||+||||++|++|+|++|||+++|+ ++|||+++|||+|.+.++++++++++|+++         .+.+||||+|.||+
T Consensus       356 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~  435 (457)
T 3lns_A          356 SEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGM  435 (457)
T ss_dssp             SSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEE
T ss_pred             cCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCC
Confidence            99999999999999999999999999 999999999999999999999999999833         34579999999999


Q ss_pred             CChhHHHHHHHhhhceEEEEcC
Q psy1099         579 GRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       579 G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+++|++++++||+.|+|++.|
T Consensus       436 G~~~g~~~~~~f~~~k~v~~~p  457 (457)
T 3lns_A          436 GEYHGHFSYLTFTHKKSVRIVP  457 (457)
T ss_dssp             CCBSHHHHHHHTEEEEEEEECC
T ss_pred             CCCchHHHHHHhhCeeEEEeCC
Confidence            9999999999999999998765

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=9.3e-56  Score=484.00  Aligned_cols=238  Identities=21%  Similarity=0.297  Sum_probs=215.8

Q ss_pred             eeEEEecCCccccHHHHHHHHH-hccccceeeecCCCCcEEEcCCC-----CHHHHH----------hcccccccCeEEE
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAA-ASNLKRVSLELGGKSPLVICADA-----DVDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a-~~~~~~~~lElgG~~p~iV~~da-----d~~~a~----------~~~~c~a~~~v~v  422 (605)
                      ..+||||+   .+|+.|++.++ ++++||+++|||||||+||++||     |++.|+          .|+.|++++|+||
T Consensus       231 ~V~FTGS~---~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV  307 (534)
T 2y53_A          231 VVSFTGSA---DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFV  307 (534)
T ss_dssp             EEEEESCH---HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEE
T ss_pred             EEEEECCH---HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEE
Confidence            34678885   99999988764 35899999999999999999999     899886          4666999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc------CCCCeeEeeE
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK------GDKGYFIEPT  496 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~------~~~g~~~~Pt  496 (605)
                      |++++|+|+++|+++++++++|+|.++++++||++++.++++++++++++ .+|+++++||+..      ...|+|++||
T Consensus       308 ~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PT  386 (534)
T 2y53_A          308 PEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPH  386 (534)
T ss_dssp             EGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCE
T ss_pred             eccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCE
Confidence            99999999999999999999999999999999999999999999999999 6899999998642      1369999999


Q ss_pred             EeecCCCC--CcccccceeeeeeeeEeeC---CH-----HHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHc--ccCccc
Q psy1099         497 VFSNVTDD--FKIAREEIFGPVQTIIKFK---TL-----DEVIERANDTKYGLASGIVTTNIDTANTFAHAI--NAGSAV  564 (605)
Q Consensus       497 i~~~~~~~--~~~~~eE~FGPvl~i~~~~---~~-----~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~--~~G~~~  564 (605)
                      |+.+++++  +++++||+||||++|++|+   |+     +|||+++|+++|||+++|||+|.++++++++++  ++|.++
T Consensus       387 vl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~  466 (534)
T 2y53_A          387 LFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVH  466 (534)
T ss_dssp             EEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEE
T ss_pred             EEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEE
Confidence            99999987  6899999999999999999   99     999999999999999999999999999999999  788722


Q ss_pred             ----------------CCCCcccccCCCCCCCh-hHHHHHHHhhhceEEEEcC
Q psy1099         565 ----------------VPQAPFGGFKESGIGRE-LGKAALDEYTELKTVTESP  600 (605)
Q Consensus       565 ----------------~~~~PfGG~~~SG~G~~-~g~~~~~~~~~~k~v~~~~  600 (605)
                                      .+.+||||+|.||+|++ +|.+++++|++.|++...|
T Consensus       467 vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p  519 (534)
T 2y53_A          467 AISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS  519 (534)
T ss_dssp             EECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred             EcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence                            24689999999999999 6999999999999998654

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=1.3e-54  Score=498.91  Aligned_cols=240  Identities=31%  Similarity=0.494  Sum_probs=221.2

Q ss_pred             ceeEEEecCCccccHHHHHHHHHh-----ccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEE
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAA-----SNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~-----~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v  422 (605)
                      ....||||+   .+|+.|.+.++.     +++||+++|||||||+||++|||++.|+          .|+.|++++|+||
T Consensus       747 ~~V~FTGSt---~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V  823 (1026)
T 4f9i_A          747 SLIAFTGSM---ETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIV  823 (1026)
T ss_dssp             EEEEEESCH---HHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEE
T ss_pred             CEEEeCCCH---HHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEe
Confidence            344688885   999999988772     4789999999999999999999999986          4566999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCC
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVT  502 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~  502 (605)
                      |++++|+|+++|++++.++++|+|.++++++||+|++.+++++.+++++++++| ++++||...+..|+|++|||+.+++
T Consensus       824 ~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~  902 (1026)
T 4f9i_A          824 LDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIK  902 (1026)
T ss_dssp             EGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCC
T ss_pred             cHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCC
Confidence            999999999999999999999999999999999999999999999999999998 9999997654459999999999999


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCccccc
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGF  573 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~  573 (605)
                      +++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.         .+.+||||+
T Consensus       903 ~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~  982 (1026)
T 4f9i_A          903 PEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGA  982 (1026)
T ss_dssp             TTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCC
T ss_pred             CCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999832         246799999


Q ss_pred             CCCCCCC-hhHHHHHHHhhhceEEEEcCC
Q psy1099         574 KESGIGR-ELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       574 ~~SG~G~-~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      |.||+|+ .+|+++++.|++.|+|+.+..
T Consensus       983 k~SG~G~~~gG~~~l~~f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A          983 RMSGVGTKAGGPDYLLHFMDPRVVTENTM 1011 (1026)
T ss_dssp             GGGBSSCCBTSTTTGGGGEEEEEEEEECC
T ss_pred             CcCCCCCCcCCHHHHHHhceEEEEEEecc
Confidence            9999995 578999999999999987654

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.2e-54  Score=465.43  Aligned_cols=231  Identities=23%  Similarity=0.328  Sum_probs=213.0

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccce-eeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRV-SLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~-~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      +...||||+   .+|+.|++.++. +++|+ ++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       219 ~~V~fTGS~---~~g~~i~~~aa~-~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~  294 (490)
T 3ju8_A          219 DGLFFTGSS---RTGNLLHSQFGG-QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGA  294 (490)
T ss_dssp             SEEEEESCH---HHHHHHHHHTTT-CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSH
T ss_pred             CEEEEECcH---HHHHHHHHHhhc-cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCc
Confidence            344689985   999999888776 89998 8999999999999999999986          46669999999999996


Q ss_pred             -HHHHHHHHHHHHhhcccCC-CCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCC
Q psy1099         427 -YDTFVKKAVEKAAARKVGD-PFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       427 -~~~~~~~l~~~~~~~~~g~-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~  504 (605)
                       +|+|+++|++++.++++|+ |.++.+++||++++.+++++++++++++++|+++++||...+..|+|++|||+. ++++
T Consensus       295 i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~  373 (490)
T 3ju8_A          295 WGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAV  373 (490)
T ss_dssp             HHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTC
T ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCC
Confidence             9999999999999999999 999999999999999999999999999999999999997666689999999998 9999


Q ss_pred             CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCC
Q psy1099         505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKES  576 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~S  576 (605)
                      |++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+++        .+.+||||+|.|
T Consensus       374 ~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~S  453 (490)
T 3ju8_A          374 AERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGAS  453 (490)
T ss_dssp             SSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGG
T ss_pred             CccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCcccc
Confidence            999999999999999999999999999999999999999999999999999999999833        245799999999


Q ss_pred             CCCChhHHHHHHHhhhceEEEEc
Q psy1099         577 GIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       577 G~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                      |++      ++++||+.|+|+..
T Consensus       454 G~~------~~~~~~~~k~v~~~  470 (490)
T 3ju8_A          454 GNH------RPSAYYAADYCAYP  470 (490)
T ss_dssp             BSS------CCEETTHHHHHEEE
T ss_pred             chh------HHHhhheeEEEEEe
Confidence            985      47899999988754

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=4e-52  Score=477.23  Aligned_cols=237  Identities=26%  Similarity=0.354  Sum_probs=214.8

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhc--cccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEec
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAAS--NLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQE  424 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~--~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~  424 (605)
                      .....||||+   .+|+.|++.++.+  +++|+++|+|||||+||++|||++.|+          .|+.|++++++|||+
T Consensus       728 Vd~V~FTGSt---~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e  804 (1001)
T 3haz_A          728 IAGVVFTGST---EVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQE  804 (1001)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEH
T ss_pred             cCEEEecCCH---HHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccH
Confidence            3444788885   9999999888862  589999999999999999999999986          455699999999999


Q ss_pred             ccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCC
Q psy1099         425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDD  504 (605)
Q Consensus       425 ~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~  504 (605)
                      +++|+|+++|++++.++++|+|.++.+++||+++..+++++.++++++.+.| ++ +||... ..|+|++|||+.+  ++
T Consensus       805 ~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~  879 (1001)
T 3haz_A          805 DVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TE  879 (1001)
T ss_dssp             HHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SS
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CC
Confidence            9999999999999999999999999999999999999999999999999888 88 877653 4699999999974  67


Q ss_pred             CcccccceeeeeeeeEeeCC--HHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCccccc
Q psy1099         505 FKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGF  573 (605)
Q Consensus       505 ~~~~~eE~FGPvl~i~~~~~--~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~  573 (605)
                      +.+++||+||||++|++|++  ++|||+++|.++|||+++|||+|.+.++++++++++|.+.+         +.+||||+
T Consensus       880 ~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~  959 (1001)
T 3haz_A          880 AGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGN  959 (1001)
T ss_dssp             GGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCC
T ss_pred             HHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCc
Confidence            88999999999999999996  79999999999999999999999999999999999998332         35799999


Q ss_pred             CCCCCC-ChhHHHHHHHhhhceEEEEcCC
Q psy1099         574 KESGIG-RELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       574 ~~SG~G-~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      |.||+| +.+|++++++||+.|+|+.+..
T Consensus       960 k~SG~G~~~gG~~gl~~ft~~K~v~~~~~  988 (1001)
T 3haz_A          960 GLSGTGPKAGGPHYLARFATEQTVTINTA  988 (1001)
T ss_dssp             GGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred             ccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence            999999 4678999999999999998654

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-49  Score=433.81  Aligned_cols=226  Identities=18%  Similarity=0.182  Sum_probs=200.8

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccc--cceeeecCCCCcEEEcCCC---CHHHHH----------hcccccccCeEE
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNL--KRVSLELGGKSPLVICADA---DVDMAY----------YYCFVCAGSRTY  421 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~--~~~~lElgG~~p~iV~~da---d~~~a~----------~~~~c~a~~~v~  421 (605)
                      .+..+||||+   .+|+.|++.++. ++  ||+++|||||||+||++||   |++.|+          .|+.|++++|+|
T Consensus       255 v~~V~fTGS~---~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvl  330 (528)
T 3v4c_A          255 IKAVGFTGSL---AGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAV  330 (528)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEE
T ss_pred             CCEEEEECCh---HHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEE
Confidence            4455789985   999999988886 88  9999999999999999999   777765          455699999999


Q ss_pred             Eecc-cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeec
Q psy1099         422 VQED-IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN  500 (605)
Q Consensus       422 v~~~-~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~  500 (605)
                      ||++ ++|+|+++|++++++++.      .+.+||+++..+.+++.++++   +.|+++++||..   .|+|++|||+.+
T Consensus       331 V~~~~i~d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~  398 (528)
T 3v4c_A          331 VIEGADADRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFET  398 (528)
T ss_dssp             EESSHHHHHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEE
T ss_pred             EecccHHHHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEe
Confidence            9997 999999999999998864      467999999888887777763   479999999975   799999999998


Q ss_pred             CCCC---CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcC--CHHHHHHHHHHcc--cCccc---------
Q psy1099         501 VTDD---FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT--NIDTANTFAHAIN--AGSAV---------  564 (605)
Q Consensus       501 ~~~~---~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~--d~~~~~~~~~~~~--~G~~~---------  564 (605)
                      ++++   |++++||+||||++|++|+|+||||+++|+++|||+++|||+  |.+++++++++++  +|.++         
T Consensus       399 ~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~  478 (528)
T 3v4c_A          399 TGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVE  478 (528)
T ss_dssp             EHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCC
T ss_pred             cCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCc
Confidence            8887   899999999999999999999999999999999999999999  8899999999997  89832         


Q ss_pred             -CCCCcccc-cCCCCCCChh--HHHHHHHhhhceEEEE
Q psy1099         565 -VPQAPFGG-FKESGIGREL--GKAALDEYTELKTVTE  598 (605)
Q Consensus       565 -~~~~PfGG-~~~SG~G~~~--g~~~~~~~~~~k~v~~  598 (605)
                       .+.+|||| +|.||+|+++  |++++++||+.|++..
T Consensus       479 ~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q~  516 (528)
T 3v4c_A          479 VVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQN  516 (528)
T ss_dssp             CSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEES
T ss_pred             cCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhhc
Confidence             24579999 9999999986  9999999999998764

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=2.7e-49  Score=430.51  Aligned_cols=223  Identities=15%  Similarity=0.141  Sum_probs=198.3

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccc--cceeeecCCCCcEEEcCCCCHH--HHH----------hcccccccCeEEE
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNL--KRVSLELGGKSPLVICADADVD--MAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~--~~~~lElgG~~p~iV~~dad~~--~a~----------~~~~c~a~~~v~v  422 (605)
                      .+..+||||+   .+|+.|++.++. ++  ||+++|||||||+||++|||++  .|+          .|+.|++++|+||
T Consensus       222 v~~I~FTGS~---~~G~~i~~~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV  297 (510)
T 1ez0_A          222 IKAVGFTGSV---GGGRALFNLAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA  297 (510)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEE
T ss_pred             CCEEEEeCcH---HHHHHHHHHhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEE
Confidence            4455789985   999999988876 75  9999999999999999999999  775          4556999999999


Q ss_pred             ecc-cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCeeEeeEEeec
Q psy1099         423 QED-IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFSN  500 (605)
Q Consensus       423 ~~~-~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~g~~v~~gg~~~~~~g~~~~Pti~~~  500 (605)
                      |++ ++|+|+++|.+++.++++          ||++++.+.+++.++++++++ .|+++++||.    .|+|++|||+.+
T Consensus       298 ~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~  363 (510)
T 1ez0_A          298 LNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVT  363 (510)
T ss_dssp             ESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEE
T ss_pred             eCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEe
Confidence            999 999999999999998763          688888889999999999984 7999999986    299999999998


Q ss_pred             CCCC---CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCH--HHHHHHHHHc--ccCccc---------
Q psy1099         501 VTDD---FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI--DTANTFAHAI--NAGSAV---------  564 (605)
Q Consensus       501 ~~~~---~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~--~~~~~~~~~~--~~G~~~---------  564 (605)
                      ++++   |++++||+||||++|++|+|++|||+++|+++|||++||||+|.  ++++++++++  ++|.++         
T Consensus       364 ~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~  443 (510)
T 1ez0_A          364 SSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVE  443 (510)
T ss_dssp             EHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCC
T ss_pred             cCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCc
Confidence            8777   99999999999999999999999999999999999999999987  7999999999  688732         


Q ss_pred             -CCCCcccc-cCCCCCCCh--hHHHHHHHhhhceEEE
Q psy1099         565 -VPQAPFGG-FKESGIGRE--LGKAALDEYTELKTVT  597 (605)
Q Consensus       565 -~~~~PfGG-~~~SG~G~~--~g~~~~~~~~~~k~v~  597 (605)
                       .+.+|||| +|.||+|+.  +|++++++|++.|++.
T Consensus       444 ~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~  480 (510)
T 1ez0_A          444 VGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ  480 (510)
T ss_dssp             CSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred             cCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence             23579999 788999854  7999999999988765

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=5.8e-47  Score=406.77  Aligned_cols=205  Identities=15%  Similarity=0.063  Sum_probs=149.6

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hcc-----cccccCeEEEecccH
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYC-----FVCAGSRTYVQEDIY  427 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~~-----~c~a~~~v~v~~~~~  427 (605)
                      .+...||||+   .+|+.|++.+    +||+++|||||||+||++|||++.|+    +++     .|++++|+|||+++ 
T Consensus       211 vd~I~fTGS~---~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G~C~a~~rvlV~~~i-  282 (468)
T 1vlu_A          211 IDLVVPRGSN---ALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETLLINPKF-  282 (468)
T ss_dssp             CCEEEEESCH---HHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC----CCCCEEEEECTTS-
T ss_pred             cCEEEEECCH---HHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCCcCCcCcEEEEECCH-
Confidence            3444688885   8999997654    69999999999999999999999987    222     69999999999999 


Q ss_pred             HHHHHHHHHHHhhccc---CCCCCCCCCCCcccCHHHHHHHHHH-HHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCC
Q psy1099         428 DTFVKKAVEKAAARKV---GDPFDKSVQQGPQVDAEMFTKVLNY-IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTD  503 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~---g~~~~~~~~~gpli~~~~~~~~~~~-i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~  503 (605)
                      |+|+++|.+++.++++   |+|.+                 +++ ++++.    ++++||+     |  ++||++  +++
T Consensus       283 d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~  332 (468)
T 1vlu_A          283 SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--IQCKTV--DAD  332 (468)
T ss_dssp             TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--HHTTBC-----
T ss_pred             HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--CCCcee--eCC
Confidence            9999999999999987   77643                 334 55554    3666775     4  689987  788


Q ss_pred             CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCccc-----
Q psy1099         504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFG-----  571 (605)
Q Consensus       504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfG-----  571 (605)
                      ++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++       +..|||     
T Consensus       333 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~  412 (468)
T 1vlu_A          333 EEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEV  412 (468)
T ss_dssp             ----------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC----------
T ss_pred             CchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999998433       346999     


Q ss_pred             ccCCCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099         572 GFKESGIGRELGKAALDEYTELKTVTESP  600 (605)
Q Consensus       572 G~~~SG~G~~~g~~~~~~~~~~k~v~~~~  600 (605)
                      |+|.||+|++ |++++++||+.|+|+.+.
T Consensus       413 G~~~SG~g~~-G~~gl~~f~~~K~v~~~~  440 (468)
T 1vlu_A          413 GISTSKIHAR-GPVGLDGLVSYQYQIRGD  440 (468)
T ss_dssp             -------------CCSGGGEEEEEEEECS
T ss_pred             ceecCCCCCC-cchHHHHhcceEEEEECC
Confidence            9999999999 999999999999998763

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=1.2e-45  Score=393.14  Aligned_cols=196  Identities=23%  Similarity=0.208  Sum_probs=166.0

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----h-----cccccccCeEEEecccH
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----Y-----YCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~-----~~~c~a~~~v~v~~~~~  427 (605)
                      .+..+||||+   .+|+.+++.+    +||+++|||||||+||++|||++.|+    +     ++.|++++|+|||++++
T Consensus       208 v~~I~fTGS~---~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G~C~a~~rv~V~~~i~  280 (427)
T 1o20_A          208 LSLVIPRGGY---GLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKIA  280 (427)
T ss_dssp             CSEEEECSCH---HHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTTSTTSEEEEEEEHHHH
T ss_pred             ccEEEeCCCh---HHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCCCCCCccEEEEehhhH
Confidence            3445788885   8999997655    59999999999999999999999986    2     22699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|.+++++++++                                   +.||...  .++ + |||   +++++++
T Consensus       281 d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~~-~-Ptl---~~~~~~i  318 (427)
T 1o20_A          281 KEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--REI-V-PDV---VPATEDD  318 (427)
T ss_dssp             HHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HHH-S-TTS---EECCGGG
T ss_pred             HHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hhh-C-Ccc---cCCCcch
Confidence            99999999999987642                                   1233221  123 3 885   3457889


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC-
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG-  579 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G-  579 (605)
                      ++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.+++       +..||||+|+||+| 
T Consensus       319 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~  398 (427)
T 1o20_A          319 WPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGIST  398 (427)
T ss_dssp             TTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEEC
T ss_pred             hhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccC
Confidence            9999999999999999999999999999999999999999999999999999999443       34699999999997 


Q ss_pred             ---ChhHHHHHHHhhhceEEEEcCC
Q psy1099         580 ---RELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       580 ---~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                         +++|++++++||+.|+|+.+..
T Consensus       399 ~~~~~~g~~gl~~~~~~k~v~~~~~  423 (427)
T 1o20_A          399 QRFHARGPVGLRELTTYKFVVLGEY  423 (427)
T ss_dssp             SSSSCCEECCTGGGEEEEEEEECSS
T ss_pred             CcccCCChHHHHHHhceEEEEECCC
Confidence               4679999999999999988753

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=3.6e-45  Score=391.42  Aligned_cols=195  Identities=21%  Similarity=0.158  Sum_probs=162.5

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ..+|||++   .+|+.+++.+    +||+++|||||||+||++|||++.|+          .| .|++++|+|||++++|
T Consensus       222 ~V~fTGs~---~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d  293 (444)
T 4ghk_A          222 VIVPRGGK---SLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAP  293 (444)
T ss_dssp             EEEECSCH---HHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHH
T ss_pred             EEEEECcH---HHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHH
Confidence            33577775   8888876543    79999999999999999999999997          34 6999999999999999


Q ss_pred             HHHHHHHHHHhhccc---CCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCC
Q psy1099         429 TFVKKAVEKAAARKV---GDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF  505 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~---g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~  505 (605)
                      +|+++|++++.++++   |+|.+                 .++++++.               .|      ++  +++++
T Consensus       294 ~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i~~a~---------------~G------~~--~~~~~  333 (444)
T 4ghk_A          294 AVLSPLGRLYREKGVELRVDADA-----------------RAVLEAAG---------------VG------PL--VDATD  333 (444)
T ss_dssp             HHHHHHHHHHHHTTCEEEECHHH-----------------HHHHHHTT---------------CC------CC--EECCS
T ss_pred             HHHHHHHHHHHHcCCeecCCHHH-----------------HHHHHhcc---------------cC------cc--cCCCc
Confidence            999999999999887   66431                 34555442               12      12  35678


Q ss_pred             cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCC
Q psy1099         506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGI  578 (605)
Q Consensus       506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~  578 (605)
                      ++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+++       .+..||||.|+||+
T Consensus       334 ~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~  413 (444)
T 4ghk_A          334 EDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGI  413 (444)
T ss_dssp             GGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEE
T ss_pred             hhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999833       35689999999999


Q ss_pred             C----ChhHHHHHHHhhhceEEEEcCC
Q psy1099         579 G----RELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       579 G----~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      |    +++|++++++||+.|+|+.+..
T Consensus       414 g~~~~~~~G~~gl~~~t~~K~v~~~~~  440 (444)
T 4ghk_A          414 SNDKLHARGPVGLEGLTSLKYVVLGHG  440 (444)
T ss_dssp             ECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred             cCCcccCCChhHHHhhceEEEEEECCC
Confidence            8    6789999999999999987654

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.7e-45  Score=388.98  Aligned_cols=196  Identities=21%  Similarity=0.151  Sum_probs=162.7

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH---------hcccccccCeEEEecccHH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY---------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~---------~~~~c~a~~~v~v~~~~~~  428 (605)
                      +..+||||+   .+|+.|++.++   +||+++|||||||+||++|||++.|+         +|+.|++++|+|||++++|
T Consensus       221 d~I~FTGS~---~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~nGQ~C~a~~rvlV~~~i~d  294 (463)
T 2h5g_A          221 DLIIPRGSS---QLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLR  294 (463)
T ss_dssp             SEEEEESCH---HHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSCTTSTTSEEEEEEEGGGTT
T ss_pred             CEEEEECCH---HHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccCCCccccCcEEEEeccccc
Confidence            344688885   99999987665   89999999999999999999999986         4566999999999999998


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                                               ||+     ++   +++++++++|++++.|+.. ...|+|+        +++|+++
T Consensus       295 -------------------------~p~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~  332 (463)
T 2h5g_A          295 -------------------------TPL-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSL  332 (463)
T ss_dssp             -------------------------SHH-----HH---HHHHHHHHTTCEEEECHHH-HC-----------------CCS
T ss_pred             -------------------------hHH-----HH---HHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHH
Confidence                                     343     23   3477788889999855442 2345543        5789999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC--
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG--  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G--  579 (605)
                      +||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.+++       +.+||||+|+||+|  
T Consensus       333 ~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~  412 (463)
T 2h5g_A          333 RTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTS  412 (463)
T ss_dssp             SCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECC
T ss_pred             hccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCC
Confidence            999999999999999999999999999999999999999999999999999998433       46899999999999  


Q ss_pred             Ch--hHHHHHHHhhhceEEEEcCC
Q psy1099         580 RE--LGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       580 ~~--~g~~~~~~~~~~k~v~~~~~  601 (605)
                      ++  +|++++++||+.|+|+.+..
T Consensus       413 r~~~~G~~gl~~ft~~K~v~~~~~  436 (463)
T 2h5g_A          413 RIHARGPVGLEGLLTTKWLLRGKD  436 (463)
T ss_dssp             SSSCCEECCGGGGEEEEEEEECSS
T ss_pred             cccCCCHHHHHHhceeEEEEECCC
Confidence            65  89999999999999987643

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=1.2e-44  Score=389.87  Aligned_cols=215  Identities=13%  Similarity=0.159  Sum_probs=188.4

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecC-CCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELG-GKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElg-G~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ..|||++   .    +++.++ +++||+ +|+| ||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       195 I~fTGs~---~----v~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d  265 (464)
T 3k9d_A          195 ILATGGS---A----MVKAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKE  265 (464)
T ss_dssp             EEECSCH---H----HHHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHH
T ss_pred             EEEeCCh---H----HHHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHH
Confidence            3566663   2    344444 489999 8998 99999999999999997          4555999999999999999


Q ss_pred             HHHHHHHHHH-------hhcccCCCC-CCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeec
Q psy1099         429 TFVKKAVEKA-------AARKVGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN  500 (605)
Q Consensus       429 ~~~~~l~~~~-------~~~~~g~~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~  500 (605)
                      +|+++|+++.       .++++|+|. ++++++||+++..+++++.++++.++.+|+++++||..              +
T Consensus       266 ~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~  331 (464)
T 3k9d_A          266 AVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------K  331 (464)
T ss_dssp             HHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------C
T ss_pred             HHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------C
Confidence            9999999885       467889887 77899999999999999999999999999999998853              5


Q ss_pred             CCCCCcccccceeeeeeeeEeeCCHHHHH----HHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcc-------------
Q psy1099         501 VTDDFKIAREEIFGPVQTIIKFKTLDEVI----ERANDTKYGLASGIVTTNIDTANTFAHAINAGSA-------------  563 (605)
Q Consensus       501 ~~~~~~~~~eE~FGPvl~i~~~~~~~eai----~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~-------------  563 (605)
                      +++++++. ||+||||++|++|+|++|||    +++|.++|||+++|||+|.+.++++++++++|++             
T Consensus       332 v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~  410 (464)
T 3k9d_A          332 VGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGA  410 (464)
T ss_dssp             CSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTS
T ss_pred             CCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCcccccccc
Confidence            67778765 89999999999999999997    7999999999999999999999999999999982             


Q ss_pred             ---cCCCCcccccCCCCCCChhHHHHHHHhhhceEEEEc
Q psy1099         564 ---VVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES  599 (605)
Q Consensus       564 ---~~~~~PfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~  599 (605)
                         ..+.+|||| +.+|.|.++|..++++|++.|+|.+.
T Consensus       411 ~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~  448 (464)
T 3k9d_A          411 TTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG  448 (464)
T ss_dssp             SSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred             CCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence               235689999 78899999999999999999999864

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.1e-41  Score=363.28  Aligned_cols=203  Identities=19%  Similarity=0.222  Sum_probs=159.6

Q ss_pred             HhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHHHHHHHHHHHhhcccCCCCCC
Q psy1099         380 AASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDK  449 (605)
Q Consensus       380 a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~~~~~l~~~~~~~~~g~~~~~  449 (605)
                      +++++||+++|+|||||+||++|||++.|+          .|+.|++++|+|||++++|+|+++|+++            
T Consensus       202 a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~------------  269 (452)
T 3my7_A          202 AYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH------------  269 (452)
T ss_dssp             HHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT------------
T ss_pred             HHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh------------
Confidence            334899999999999999999999999997          4556999999999999999999988765            


Q ss_pred             CCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc---CCCCeeEeeEE-------eecCCCCCcccccceeeeeeee
Q psy1099         450 SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK---GDKGYFIEPTV-------FSNVTDDFKIAREEIFGPVQTI  519 (605)
Q Consensus       450 ~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~---~~~g~~~~Pti-------~~~~~~~~~~~~eE~FGPvl~i  519 (605)
                         .||++++.+++++.++++++...|++++ ||...   ...|+|++||+       +.++++++++++ |+||||++|
T Consensus       270 ---~gpli~~~~~~~v~~~i~~~~~~~a~v~-G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v  344 (452)
T 3my7_A          270 ---KAHVLSKTDADKVRKVLLIDGALNAKIV-GQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGM  344 (452)
T ss_dssp             ---TEEECCHHHHHHHHHHHEETTEECGGGT-TCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEE
T ss_pred             ---CCCcCCHHHHHHHHHHHHhhcccCCeEe-cCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEE
Confidence               3999999999999999987766777774 66532   13699999997       668899999886 899999999


Q ss_pred             EeeCCHHHHHHHhhcCC----CCceEEEEcCCHHHHHH---HHHHcccCcc-cCCCCcccccCCC-----------CCCC
Q psy1099         520 IKFKTLDEVIERANDTK----YGLASGIVTTNIDTANT---FAHAINAGSA-VVPQAPFGGFKES-----------GIGR  580 (605)
Q Consensus       520 ~~~~~~~eai~~~n~~~----~gL~a~vft~d~~~~~~---~~~~~~~G~~-~~~~~PfGG~~~S-----------G~G~  580 (605)
                      ++|+|++|||+++|++.    |||+++|||+|.+.+++   +++++++|++ +|...||||+|..           |.|.
T Consensus       345 ~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~g~g~  424 (452)
T 3my7_A          345 FRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGS  424 (452)
T ss_dssp             EEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC----------------------
T ss_pred             EEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEeeeccc
Confidence            99999999999999985    99999999999887777   9999999995 4566899998853           4444


Q ss_pred             hhH-----HHHHHHhhhceEEEEc
Q psy1099         581 ELG-----KAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g-----~~~~~~~~~~k~v~~~  599 (605)
                      .+|     ..+.+++.+.|+|.+.
T Consensus       425 ~Gg~~~~~nv~~~~l~n~~~v~~~  448 (452)
T 3my7_A          425 WGGNSISENVGPKHLINKKTVAKR  448 (452)
T ss_dssp             ------CCCCCGGGGEEEEEEECC
T ss_pred             cCCCccCCCCChhHeeeeeEEEee
Confidence            433     2356777778887653

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=7.7e-39  Score=344.85  Aligned_cols=259  Identities=41%  Similarity=0.718  Sum_probs=237.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.||+++.++++++++||+|+|++|+|+|++.++...|                      
T Consensus       159 ~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~  238 (490)
T 2wme_A          159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM  238 (490)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             hhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999876532111                      


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    +|++||+++||+|++++++++++++
T Consensus       239 ~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~l~  314 (490)
T 2wme_A          239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNG----TRVFIHRSQQARFEAKVLERVQRIR  314 (490)
T ss_dssp             HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCC----CEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred             HhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCc----eeeccchhHHHHHHHHHHHHHHhCc
Confidence                                                        1456666    9999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|+++++++||+++..+++++..+|+.+.++|+++..||.....                                  
T Consensus       315 vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~----------------------------------  360 (490)
T 2wme_A          315 LGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTD----------------------------------  360 (490)
T ss_dssp             BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCT----------------------------------
T ss_pred             CCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCc----------------------------------
Confidence            9999999999999999999999999999999999999999875210                                  


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                          ....+|+|++||
T Consensus       361 --------------------------------------------------------------------~~~~~G~~~~Pt  372 (490)
T 2wme_A          361 --------------------------------------------------------------------GAFGKGAYVAPT  372 (490)
T ss_dssp             --------------------------------------------------------------------TTGGGTTCBCCE
T ss_pred             --------------------------------------------------------------------ccccCCCccCCE
Confidence                                                                                001258999999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+|
T Consensus       373 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~P  452 (490)
T 2wme_A          373 VFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMP  452 (490)
T ss_dssp             EEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSC
T ss_pred             EEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998877788999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      |||+|+||+|+++|.+++++|++.|+++.+.
T Consensus       453 FGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~  483 (490)
T 2wme_A          453 VGGYKQSGVGRENGLTTLAHYTRIKSVQVEL  483 (490)
T ss_dssp             BCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred             cccccccccCchhHHHHHHHhhceeEEEEEC
Confidence            9999999999999999999999999988653

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=1e-36  Score=328.77  Aligned_cols=253  Identities=37%  Similarity=0.617  Sum_probs=229.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....                       
T Consensus       165 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~  244 (484)
T 3ifg_A          165 IARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLM  244 (484)
T ss_dssp             HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999864321100                       


Q ss_pred             ------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          59 ------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        59 ------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                            +                                    .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       245 ~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  320 (484)
T 3ifg_A          245 AQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCT----NRFFVHERVYDAFADKLAAAVSKLKV  320 (484)
T ss_dssp             HHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCC----CEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred             HHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCC----CeEEEcHHHHHHHHHHHHHHHHhccC
Confidence                  0                                    1356666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++.+||+++..+++++.++|+.+.+.|+++.+||...                                     
T Consensus       321 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~-------------------------------------  363 (484)
T 3ifg_A          321 GRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH-------------------------------------  363 (484)
T ss_dssp             SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC-------------------------------------
T ss_pred             CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc-------------------------------------
Confidence            9999999999999999999999999988888888877777531                                     


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                           ...|+|++|||
T Consensus       364 ---------------------------------------------------------------------~~~g~~~~PTv  374 (484)
T 3ifg_A          364 ---------------------------------------------------------------------ALGHGFFEPTV  374 (484)
T ss_dssp             ---------------------------------------------------------------------TTCTTCBCCEE
T ss_pred             ---------------------------------------------------------------------CCCCceEcCEE
Confidence                                                                                 12578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       375 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~Pf  454 (484)
T 3ifg_A          375 LTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPF  454 (484)
T ss_dssp             EEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCB
T ss_pred             EecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987777889999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      ||+|+||+|+++|.+++++|++.|+++.
T Consensus       455 GG~k~SG~Gr~~g~~gl~~~~~~k~v~~  482 (484)
T 3ifg_A          455 GGVKQSGLGREGSHYGIDDYVVIKYLCV  482 (484)
T ss_dssp             CCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred             CCcCcCcCCCCchHHHHHHhhceEEEEE
Confidence            9999999999999999999999998864

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=1.6e-36  Score=327.11  Aligned_cols=255  Identities=27%  Similarity=0.436  Sum_probs=232.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|+++....++                      
T Consensus       140 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~fTGS~~~G~~i~~  219 (484)
T 3ros_A          140 VIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAE  219 (484)
T ss_dssp             HHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999654321110                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++||+|++++.++++++++|
T Consensus       220 ~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~G  295 (484)
T 3ros_A          220 AAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSS----KRIIVEKSRYDEVLHELKNVFSNLKAG  295 (484)
T ss_dssp             HHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSC----CEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred             HHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCC----ceEEEcHHHHHHHHHHHHHHHHhccCC
Confidence                                                      1346666    999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|+++++++||+++..+++++.++|+.+.++|+++.+||..                                       
T Consensus       296 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---------------------------------------  336 (484)
T 3ros_A          296 DPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPE---------------------------------------  336 (484)
T ss_dssp             CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCC---------------------------------------
T ss_pred             CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCc---------------------------------------
Confidence            99999999999999999999999998888888887777743                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                         ....|+|++|||+
T Consensus       337 -------------------------------------------------------------------~~~~g~~~~PTvl  349 (484)
T 3ros_A          337 -------------------------------------------------------------------IDSKGAFFRPTIL  349 (484)
T ss_dssp             -------------------------------------------------------------------CCCSSCCCCCEEE
T ss_pred             -------------------------------------------------------------------CCCCCceeCCeEe
Confidence                                                                               1235889999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+|||
T Consensus       350 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfG  429 (484)
T 3ros_A          350 TDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFG  429 (484)
T ss_dssp             ECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBC
T ss_pred             ecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987778999999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      |+|+||+|+++|.+++++|++.|+++...
T Consensus       430 G~k~SG~Gr~~G~~gl~~ft~~K~v~~~~  458 (484)
T 3ros_A          430 GIKKSGYGRELSGLGLMAFVNEHLVIDVT  458 (484)
T ss_dssp             CSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred             CcCcccCCcCchHHHHHHhheeEEEEECC
Confidence            99999999999999999999999988763

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=2.8e-36  Score=327.63  Aligned_cols=259  Identities=38%  Similarity=0.700  Sum_probs=234.3

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|+++|||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....+                      
T Consensus       187 ~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~  266 (520)
T 3ed6_A          187 ASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIM  266 (520)
T ss_dssp             HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999654422110                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|+++++++++++++
T Consensus       267 ~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~l~v  342 (520)
T 3ed6_A          267 KNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAG----SRILVQNSIKDKFEQALIDRVKKIKL  342 (520)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCC----CEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred             HHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccC----ceEEEcHHHHHHHHHHHHHHHHhccC
Confidence                                                       1456666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++.+||+++..+++++.++|+.+.+.|+++.+||+.+..                                   
T Consensus       343 G~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-----------------------------------  387 (520)
T 3ed6_A          343 GNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDR-----------------------------------  387 (520)
T ss_dssp             CCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCC-----------------------------------
T ss_pred             CCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcc-----------------------------------
Confidence            999999999999999999999999999999999999888864200                                   


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....|+|++|||
T Consensus       388 -------------------------------------------------------------------~~~~~g~f~~PTv  400 (520)
T 3ed6_A          388 -------------------------------------------------------------------DDLKDGLFFEPTV  400 (520)
T ss_dssp             -------------------------------------------------------------------GGGTTTTCCCCEE
T ss_pred             -------------------------------------------------------------------ccCCCCceECCeE
Confidence                                                                               0012589999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       401 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~Pf  480 (520)
T 3ed6_A          401 ITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPW  480 (520)
T ss_dssp             EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCB
T ss_pred             EecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987666789999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ||+|+||+|+++|.+++++|++.|+++...
T Consensus       481 GG~k~SG~Gre~G~~gl~~~t~~k~v~~~~  510 (520)
T 3ed6_A          481 GGYKQSGIGRELGKEGLEEYLVSKHILTNT  510 (520)
T ss_dssp             CCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred             CCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence            999999999999999999999999987653

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=3.3e-36  Score=325.93  Aligned_cols=256  Identities=34%  Similarity=0.586  Sum_probs=231.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+... ++                     
T Consensus       164 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~  243 (506)
T 3rh9_A          164 IAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLI  243 (506)
T ss_dssp             HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999986432110 00                     


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       244 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  319 (506)
T 3rh9_A          244 VDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCA----NRIFVHEKVADAFGQKLAERVNKMTV  319 (506)
T ss_dssp             HHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSC----CEEEEETTTHHHHHHHHHHHHHHCCB
T ss_pred             HHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccC----cEEEEcHHHHHHHHHHHHHHHHhccC
Confidence                                                       1456666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++.++|+.+.++|+++.+||...                                     
T Consensus       320 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~-------------------------------------  362 (506)
T 3rh9_A          320 GDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPA-------------------------------------  362 (506)
T ss_dssp             SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGG-------------------------------------
T ss_pred             CCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcC-------------------------------------
Confidence            9999999999999999999999999999888888888877531                                     


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       363 --------------------------------------------------------------------~~~~g~~~~PTv  374 (506)
T 3rh9_A          363 --------------------------------------------------------------------ELGDGLFFPPTV  374 (506)
T ss_dssp             --------------------------------------------------------------------GCCSSSCCCCEE
T ss_pred             --------------------------------------------------------------------CCCCCcEECCeE
Confidence                                                                                011578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       375 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~Pf  454 (506)
T 3rh9_A          375 VQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPF  454 (506)
T ss_dssp             EECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCB
T ss_pred             EccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987777788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ||+|.||+|+++|.+++++|++.|+++...
T Consensus       455 GG~k~SG~G~~~G~~gl~~ft~~K~v~~~~  484 (506)
T 3rh9_A          455 GGMKASGIGREGGLEGLFEFVEAQTVPRGF  484 (506)
T ss_dssp             CCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred             cCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence            999999999999999999999999987653

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=2e-36  Score=327.43  Aligned_cols=252  Identities=39%  Similarity=0.632  Sum_probs=228.3

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....+                      
T Consensus       185 ~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~  264 (504)
T 3ek1_A          185 ITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLM  264 (504)
T ss_dssp             HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998643211100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|+++++++.+++++
T Consensus       265 ~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  340 (504)
T 3ek1_A          265 AQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCA----NRIYVQRGVYDKFAEKLAAKVKELKV  340 (504)
T ss_dssp             HHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred             HhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCC----CEEEEehhHHHHHHHHHHHHHhhccc
Confidence                                                       1356666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++.++|+.+.+.|+++.+||..                                      
T Consensus       341 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--------------------------------------  382 (504)
T 3ek1_A          341 GNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--------------------------------------  382 (504)
T ss_dssp             SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--------------------------------------
T ss_pred             CCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--------------------------------------
Confidence            999999999999999999999988888887777777666631                                      


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                            ..|+|++|||
T Consensus       383 ----------------------------------------------------------------------~~g~~~~PTv  392 (504)
T 3ek1_A          383 ----------------------------------------------------------------------LGGLFFEPGI  392 (504)
T ss_dssp             ----------------------------------------------------------------------EETTEECCEE
T ss_pred             ----------------------------------------------------------------------CCCceECCeE
Confidence                                                                                  1478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||
T Consensus       393 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~Pf  472 (504)
T 3ek1_A          393 LTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPF  472 (504)
T ss_dssp             EEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCB
T ss_pred             EecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987777789999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|+||+|+++|.+++++|++.|+++..
T Consensus       473 GG~k~SG~Gr~~G~~gl~~~t~~K~v~~~  501 (504)
T 3ek1_A          473 GGVKQSGLGREGSKYGIEEYLETKYICSA  501 (504)
T ss_dssp             CCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred             CCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence            99999999999999999999999998765

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=2.8e-36  Score=326.29  Aligned_cols=253  Identities=32%  Similarity=0.618  Sum_probs=230.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.++++++.++ +|+|++|+|+|++.+....+                      
T Consensus       178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~  256 (498)
T 4f3x_A          178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL  256 (498)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            5789999999999999999999999999999999999 99999999999765421100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       257 ~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~v  332 (498)
T 4f3x_A          257 AAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAA----CRIYAEAGIYEKLVADLTSAVSTIRY  332 (498)
T ss_dssp             HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCE----EEEEEETTTHHHHHHHHHHHHTTCCC
T ss_pred             HHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCC----ceEEecHHHHHHHHHHHHHHHHhccc
Confidence                                                       1356666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCc-EEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~-~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      |+|+++++.+||+++..+++++.++|+.+.++|+ ++.+||..                                     
T Consensus       333 G~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~-------------------------------------  375 (498)
T 4f3x_A          333 NLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRT-------------------------------------  375 (498)
T ss_dssp             SCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSB-------------------------------------
T ss_pred             CCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCcc-------------------------------------
Confidence            9999999999999999999999999988888887 77777753                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       376 ---------------------------------------------------------------------~~~~g~~~~PT  386 (498)
T 4f3x_A          376 ---------------------------------------------------------------------GSDEGFFFQPT  386 (498)
T ss_dssp             ---------------------------------------------------------------------CCSSSCCBCCE
T ss_pred             ---------------------------------------------------------------------CCCCCcEECCE
Confidence                                                                                 12358899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus       387 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~P  466 (498)
T 4f3x_A          387 VVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMP  466 (498)
T ss_dssp             EEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSC
T ss_pred             EeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998766678999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|+||+|+++|.+++++|++.|+++..
T Consensus       467 fGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~  496 (498)
T 4f3x_A          467 HGGIKQSGYGKDMSVYALEDYTAVRHIMIN  496 (498)
T ss_dssp             BCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred             cCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence            999999999999999999999999988754

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=5.9e-36  Score=324.70  Aligned_cols=256  Identities=39%  Similarity=0.749  Sum_probs=232.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCCh-hhh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA-PYW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~-~~~---------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+.. .++                     
T Consensus       168 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~  247 (503)
T 3iwj_A          168 ATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIM  247 (503)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998643211 000                     


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       248 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  323 (503)
T 3iwj_A          248 TAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSAT----SRLILHESIATEFLNRIVKWIKNIKI  323 (503)
T ss_dssp             HHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCE----EEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred             HHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccC----CeeEEcHHHHHHHHHHHHHHHHhccC
Confidence                                                       1356666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++.++|+.+.+.|+++.+||....                                    
T Consensus       324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~------------------------------------  367 (503)
T 3iwj_A          324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE------------------------------------  367 (503)
T ss_dssp             SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT------------------------------------
T ss_pred             CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCc------------------------------------
Confidence            99999999999999999999999999998888888888875310                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       368 --------------------------------------------------------------------~~~~g~~~~PTv  379 (503)
T 3iwj_A          368 --------------------------------------------------------------------HLKKGFFIEPTI  379 (503)
T ss_dssp             --------------------------------------------------------------------TCCSSSCCCCEE
T ss_pred             --------------------------------------------------------------------cCCCCceeCCee
Confidence                                                                                013588999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+||
T Consensus       380 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~Pf  459 (503)
T 3iwj_A          380 ITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPW  459 (503)
T ss_dssp             EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCB
T ss_pred             eecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987777889999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|.||+|+++|.+++++|++.|+++..
T Consensus       460 GG~k~SG~G~~~G~~g~~~f~~~k~v~~~  488 (503)
T 3iwj_A          460 GGVKRSGFGRELGEWGLDNYLSVKQVTQY  488 (503)
T ss_dssp             CCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred             CCcCcccCCCcchHHHHHHhhCeEEEEEe
Confidence            99999999999999999999999998765

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=5e-36  Score=325.38  Aligned_cols=253  Identities=44%  Similarity=0.801  Sum_probs=228.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ++|+++|||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+|.+.....                        
T Consensus       195 ~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~  274 (517)
T 2o2p_A          195 LSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM  274 (517)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999985422110                        


Q ss_pred             ------hh------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          58 ------YW------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        58 ------~~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                            .+                                    .|.|.++    +|++||+++||+|++++++++++++
T Consensus       275 ~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~  350 (517)
T 2o2p_A          275 KSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA----GRLFVEESIHNQFVQKVVEEVEKMK  350 (517)
T ss_dssp             HHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred             HHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----eEEEEeHHHHHHHHHHHHHHHHhcC
Confidence                  00                                    0346665    9999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|+++++++||+++..+++++..+|+.+.++|+++.+||+.                                     
T Consensus       351 vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------------------------------------  393 (517)
T 2o2p_A          351 IGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQ-------------------------------------  393 (517)
T ss_dssp             BSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSB-------------------------------------
T ss_pred             CCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecccc-------------------------------------
Confidence            9999999999999999999999999998888888887777753                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       394 ---------------------------------------------------------------------~~~~g~~~~PT  404 (517)
T 2o2p_A          394 ---------------------------------------------------------------------VPRPGFFFQPT  404 (517)
T ss_dssp             ---------------------------------------------------------------------CSSSSCCBCCE
T ss_pred             ---------------------------------------------------------------------CCCCCCeECCE
Confidence                                                                                 11247899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCC--HHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ  333 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~  333 (605)
                      |+.+++++|++++||+||||++|++|+|  +||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.
T Consensus       405 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~  484 (517)
T 2o2p_A          405 VFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVA  484 (517)
T ss_dssp             EEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTT
T ss_pred             EEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCC
Confidence            9999999999999999999999999999  99999999999999999999999999999999999999999987766789


Q ss_pred             CCccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         334 APFGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      +||||+|+||+|+++|.+++++|++.|+++.
T Consensus       485 ~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~  515 (517)
T 2o2p_A          485 APFGGFKQSGFGKDLGEAALNEYLRIKTVTF  515 (517)
T ss_dssp             SCBCCCGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred             CCcCCcCcCCcCccChHHHHHHhCCceEEEe
Confidence            9999999999999999999999999998865

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=9.9e-36  Score=321.87  Aligned_cols=254  Identities=35%  Similarity=0.615  Sum_probs=228.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++......+                      
T Consensus       178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~  257 (497)
T 3i44_A          178 VTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDIS  257 (497)
T ss_dssp             HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999764422110                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++||+|+++++++++++++|
T Consensus       258 ~~aa~~~k~v~lElGGk~p~IV~~dAD~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~vG  333 (497)
T 3i44_A          258 KNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCFYNSGQSCNAP----TRMLVEQAIYDKAIKTAKDIAEKTQVG  333 (497)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSCTTHHHHHHHHHHGGGGCCTTCC----CEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred             HHHhhcCCceeeccCCCCceEECCChhHHHHHHHHHHHHhcCCCCcccC----CEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence                                                      0345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|+++++.+||+++..+++++.++|+.+.++|+++.+||....                                     
T Consensus       334 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~-------------------------------------  376 (497)
T 3i44_A          334 PGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLP-------------------------------------  376 (497)
T ss_dssp             CTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCC-------------------------------------
T ss_pred             CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-------------------------------------
Confidence            9999999999999999999999999999988888888884210                                     


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                        .....|+|++|||+
T Consensus       377 ------------------------------------------------------------------~~~~~g~~~~PTvl  390 (497)
T 3i44_A          377 ------------------------------------------------------------------MGMERGYYVRPTVF  390 (497)
T ss_dssp             ------------------------------------------------------------------TTCCSSCCCCCEEE
T ss_pred             ------------------------------------------------------------------CcCCCCcEECCEEE
Confidence                                                                              00125899999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. ....+.+|||
T Consensus       391 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfG  469 (497)
T 3i44_A          391 ADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFG  469 (497)
T ss_dssp             ESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBC
T ss_pred             EeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999994 5557889999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEE
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVT  363 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t  363 (605)
                      |+|.||+|+++|.+++++|++.|+++
T Consensus       470 G~k~SG~Gr~~G~~gl~~~t~~K~v~  495 (497)
T 3i44_A          470 GVKFSGRAREGGLWGIKEFLDTKAIS  495 (497)
T ss_dssp             CSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred             CcCcCcCCccchHHHHHHhcceeEEE
Confidence            99999999999999999999999875

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=5.9e-36  Score=324.28  Aligned_cols=259  Identities=33%  Similarity=0.561  Sum_probs=232.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....+                      
T Consensus       165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~  244 (497)
T 3k2w_A          165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY  244 (497)
T ss_dssp             HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999664321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|+++++++++++++
T Consensus       245 ~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~v  320 (497)
T 3k2w_A          245 KTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCV----ERLYVHASVYDEFMAKFLPLVKGLKV  320 (497)
T ss_dssp             HHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred             HHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCC----cEEEEeHHHHHHHHHHHHHHHHhccC
Confidence                                                       1456666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++..+|+.+.++|+++.+||.....                                   
T Consensus       321 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-----------------------------------  365 (497)
T 3k2w_A          321 GDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATV-----------------------------------  365 (497)
T ss_dssp             SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------------------------------------
T ss_pred             CCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCc-----------------------------------
Confidence            999999999999999999999999999999999998888863100                                   


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....|+|++|||
T Consensus       366 -------------------------------------------------------------------~~~~~g~~~~Ptv  378 (497)
T 3k2w_A          366 -------------------------------------------------------------------EGFEGGCWYEPTV  378 (497)
T ss_dssp             ------------------------------------------------------------------------CCCCCCEE
T ss_pred             -------------------------------------------------------------------cccCCCceeCCEE
Confidence                                                                               0012578999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       379 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~Pf  458 (497)
T 3k2w_A          379 LVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFH  458 (497)
T ss_dssp             EESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCB
T ss_pred             EecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987666789999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ||+|+||+|+++|.+++++|++.|+++...
T Consensus       459 GG~k~SG~G~~~G~~gl~~ft~~k~v~~~~  488 (497)
T 3k2w_A          459 NGWKQSGFGGEDGKFGLEQYLEKKTVYINE  488 (497)
T ss_dssp             CCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred             CCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence            999999999999999999999999988774

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.5e-36  Score=322.56  Aligned_cols=255  Identities=40%  Similarity=0.684  Sum_probs=230.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+| +.+... ++                     
T Consensus       163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~  241 (495)
T 3b4w_A          163 AVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG  241 (495)
T ss_dssp             HHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence            5689999999999999999999999999999999999999999999998 432110 00                     


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  317 (495)
T 3b4w_A          242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQ----TRILAPRSRYDEIVAAVTNFVTALPV  317 (495)
T ss_dssp             HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEGGGHHHHHHHHHHHHHHSCB
T ss_pred             HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCC----eEEEEcccHHHHHHHHHHHHHHhcCC
Confidence                                                       1456666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++.++|+.+.++|+++.+||+.+.                                    
T Consensus       318 g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~------------------------------------  361 (495)
T 3b4w_A          318 GPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPE------------------------------------  361 (495)
T ss_dssp             CCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT------------------------------------
T ss_pred             CCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccc------------------------------------
Confidence            99999999999999999999999999998888888887775310                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       362 --------------------------------------------------------------------~~~~g~~~~PTv  373 (495)
T 3b4w_A          362 --------------------------------------------------------------------GLDNGFFIQPTV  373 (495)
T ss_dssp             --------------------------------------------------------------------TCTTSCCCCCEE
T ss_pred             --------------------------------------------------------------------cccCCceeCCEE
Confidence                                                                                001478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+ ..+.+||
T Consensus       374 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~Pf  452 (495)
T 3b4w_A          374 FADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPF  452 (495)
T ss_dssp             EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCB
T ss_pred             ecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999876 7789999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ||+|.||+|+++|.+++++|++.|+++...
T Consensus       453 GG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~  482 (495)
T 3b4w_A          453 GGYKNSGIGRENGPEGVEHFTQQKSVLLPM  482 (495)
T ss_dssp             CCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred             CCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence            999999999999999999999999987754

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=9.4e-36  Score=323.23  Aligned_cols=258  Identities=40%  Similarity=0.709  Sum_probs=232.3

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|+.+.+..++                      
T Consensus       167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~  246 (517)
T 3r31_A          167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA  246 (517)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999433211110                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++||+|++++.++++++++|
T Consensus       247 ~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~G  322 (517)
T 3r31_A          247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNG----TRVFVQKKAKARFLENLKRRTEAMILG  322 (517)
T ss_dssp             HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTC----EEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred             HhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccC----ceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence                                                      1356666    999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|+++++++||+++..+++++.++|+.+.++|+++.+|| ...+                                    
T Consensus       323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~------------------------------------  365 (517)
T 3r31_A          323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPN------------------------------------  365 (517)
T ss_dssp             CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCS------------------------------------
T ss_pred             CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCc------------------------------------
Confidence            999999999999999999999999999988888888887 3100                                    


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                        .....|+|++|||+
T Consensus       366 ------------------------------------------------------------------~~~~~g~~~~PTvl  379 (517)
T 3r31_A          366 ------------------------------------------------------------------NVAGEGAYVQPTVF  379 (517)
T ss_dssp             ------------------------------------------------------------------SCCSSSBCCCCEEE
T ss_pred             ------------------------------------------------------------------ccCCCCceECCEEE
Confidence                                                                              00125889999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+|||
T Consensus       380 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfG  459 (517)
T 3r31_A          380 ADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFG  459 (517)
T ss_dssp             EEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBC
T ss_pred             ecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999877778999999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      |+|.||+|+++|.+++++|++.|+++...
T Consensus       460 G~k~SG~Gr~~G~~gl~~ft~~K~v~~~~  488 (517)
T 3r31_A          460 GSKQSGFGRENSAAALEHYSELKTVYVST  488 (517)
T ss_dssp             CEETTEECCBSTGGGGGGSEEEEEEEECC
T ss_pred             CcCcCCCCcCchHHHHHHhhceEEEEEcC
Confidence            99999999999999999999999988764

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.7e-36  Score=324.30  Aligned_cols=254  Identities=39%  Similarity=0.697  Sum_probs=232.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|.+.+....+                      
T Consensus       178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~  257 (528)
T 3u4j_A          178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLG  257 (528)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999654321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|+++++++++++++
T Consensus       258 ~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  333 (528)
T 3u4j_A          258 EIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISG----SRLLVQEGIRDALMERLLDISRKVAF  333 (528)
T ss_dssp             HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEGGGHHHHHHHHHHHHHHCCE
T ss_pred             HHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCC----CEEEEechHHHHHHHHHHHHHHhhcC
Confidence                                                       1356666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++.++|+.+.++|+++.+||...                                     
T Consensus       334 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~-------------------------------------  376 (528)
T 3u4j_A          334 GDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERI-------------------------------------  376 (528)
T ss_dssp             ECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEE-------------------------------------
T ss_pred             CCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC-------------------------------------
Confidence            9999999999999999999999999998888888888777531                                     


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCC-CCeeeeee
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPT  255 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Pt  255 (605)
                                                                                           .. .|+|++||
T Consensus       377 ---------------------------------------------------------------------~~~~g~~~~PT  387 (528)
T 3u4j_A          377 ---------------------------------------------------------------------GREAGLYYAPT  387 (528)
T ss_dssp             ---------------------------------------------------------------------CTTTSCEECCE
T ss_pred             ---------------------------------------------------------------------CCCCCcEecce
Confidence                                                                                 11 57899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus       388 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~P  467 (528)
T 3u4j_A          388 VFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELP  467 (528)
T ss_dssp             EEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSC
T ss_pred             EEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998777788999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|+||+|+++|.+++++|++.|+++..
T Consensus       468 fGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~  497 (528)
T 3u4j_A          468 IGGYKKSGLGRELGRYGFDEYSQFKGVHVT  497 (528)
T ss_dssp             BCCSGGGEESCBSTTHHHHHTEEEEEEEEE
T ss_pred             cCCcCcCCCCcCchHHHHHHhhceEEEEEe
Confidence            999999999999999999999999998765

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=1.2e-35  Score=321.27  Aligned_cols=253  Identities=37%  Similarity=0.635  Sum_probs=229.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.++++++.++|+|+|++|+|+|++.+....+                      
T Consensus       162 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~  241 (481)
T 3jz4_A          162 ITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM  241 (481)
T ss_dssp             HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998653221100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       242 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  317 (481)
T 3jz4_A          242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA----NRLYVQDGVYDRFAEKLQQAMSKLHI  317 (481)
T ss_dssp             HHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEEGGGHHHHHHHHHHHHTTCCB
T ss_pred             HHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCC----cEEEEeHHHHHHHHHHHHHHHHhccC
Confidence                                                       1356666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++.++|+.+.+.|+++.+||..                                      
T Consensus       318 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--------------------------------------  359 (481)
T 3jz4_A          318 GDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA--------------------------------------  359 (481)
T ss_dssp             SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB--------------------------------------
T ss_pred             CCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--------------------------------------
Confidence            999999999999999999999999998888888887777743                                      


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       360 --------------------------------------------------------------------~~~~g~~~~Ptv  371 (481)
T 3jz4_A          360 --------------------------------------------------------------------HERGGNFFQPTI  371 (481)
T ss_dssp             --------------------------------------------------------------------CTTCTTCBCCEE
T ss_pred             --------------------------------------------------------------------cCCCCceeccEE
Confidence                                                                                112478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       372 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~Pf  451 (481)
T 3jz4_A          372 LVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPF  451 (481)
T ss_dssp             EESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCB
T ss_pred             EecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987767789999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      ||+|+||+|+++|.+++++|++.|+++.
T Consensus       452 GG~k~SG~G~~~g~~g~~~~t~~k~v~~  479 (481)
T 3jz4_A          452 GGIKASGLGREGSKYGIEDYLEIKYMCI  479 (481)
T ss_dssp             CCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred             CCcccCcCCCCchHHHHHHhhceeEEEE
Confidence            9999999999999999999999998865

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=1.3e-35  Score=320.90  Aligned_cols=252  Identities=37%  Similarity=0.633  Sum_probs=227.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW---------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~---------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|+++++++ +|+|++|+|+|++.+... ++                     
T Consensus       176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~  254 (495)
T 1wnd_A          176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII  254 (495)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence            4789999999999999999999999999999999999 999999999996543221 10                     


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       255 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  330 (495)
T 1wnd_A          255 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAA----CRIYAQKGIYDTLVEKLGAAVATLKS  330 (495)
T ss_dssp             HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCC----CEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred             HHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCC----cEEEecchhHHHHHHHHHHHHHhccC
Confidence                                                       1356666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC-cEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG-GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G-~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      |+|+++++++||+++..+++++.++|+++.++| +++.+||+.                                     
T Consensus       331 g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~-------------------------------------  373 (495)
T 1wnd_A          331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK-------------------------------------  373 (495)
T ss_dssp             CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB-------------------------------------
T ss_pred             CCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcc-------------------------------------
Confidence            999999999999999999999988888887777 777666641                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                          .. ..|+|++||
T Consensus       374 --------------------------------------------------------------------~~-~~g~~~~PT  384 (495)
T 1wnd_A          374 --------------------------------------------------------------------RK-GNGYYYAPT  384 (495)
T ss_dssp             --------------------------------------------------------------------CS-SSSCCBCCE
T ss_pred             --------------------------------------------------------------------cC-CCCCeeCCE
Confidence                                                                                11 147889999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus       385 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~P  464 (495)
T 1wnd_A          385 LLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMP  464 (495)
T ss_dssp             EEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSC
T ss_pred             EEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998766678999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |||+|.||+|+++|.+++++|++.|+++.
T Consensus       465 fGG~k~SG~Gr~~G~~gl~~f~~~k~v~~  493 (495)
T 1wnd_A          465 HGGQKLSGYGKDMSLYGLEDYTVVRHVMV  493 (495)
T ss_dssp             BCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred             CCCCCcCcCCccchHHHHHHhhCeEEEEe
Confidence            99999999999999999999999998865

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=1.1e-35  Score=321.88  Aligned_cols=254  Identities=55%  Similarity=0.992  Sum_probs=229.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+|++.+....                       
T Consensus       176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~  255 (501)
T 1bxs_A          176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK  255 (501)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999965432110                       


Q ss_pred             -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                             +                                    .|.|.++    +|++||+++||+|++++.+++++++
T Consensus       256 ~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~  331 (501)
T 1bxs_A          256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAA----SRLFVEESIYDEFVRRSVERAKKYV  331 (501)
T ss_dssp             HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCC----CEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred             HHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----CEEEEchhHHHHHHHHHHHHHHhcC
Confidence                   0                                    0346665    9999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|+++++++||+++..+++++..+|+.+.++|+++.+||+.                                     
T Consensus       332 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------------------------------------  374 (501)
T 1bxs_A          332 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGP-------------------------------------  374 (501)
T ss_dssp             BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSE-------------------------------------
T ss_pred             CCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc-------------------------------------
Confidence            9999999999999999999999999988888777777766642                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       375 ---------------------------------------------------------------------~~~~g~~~~PT  385 (501)
T 1bxs_A          375 ---------------------------------------------------------------------WGNKGYFIQPT  385 (501)
T ss_dssp             ---------------------------------------------------------------------ECSSSCEECCE
T ss_pred             ---------------------------------------------------------------------CCCCCCeeCCE
Confidence                                                                                 11257899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+|
T Consensus       386 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~p  465 (501)
T 1bxs_A          386 VFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCP  465 (501)
T ss_dssp             EEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSC
T ss_pred             EEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998766678999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+|+++|.+++++|++.|+++..
T Consensus       466 fGG~k~SG~G~~~G~~~l~~f~~~K~v~~~  495 (501)
T 1bxs_A          466 FGGFKMSGNGRELGEYGFHEYTEVKTVTIK  495 (501)
T ss_dssp             BCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             CCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence            999999999999999999999999998764

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=1.1e-35  Score=321.74  Aligned_cols=254  Identities=54%  Similarity=0.972  Sum_probs=229.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|.+.+....                       
T Consensus       175 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~  254 (500)
T 1o04_A          175 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ  254 (500)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            568999999999999999999999999999999999999999999999865432110                       


Q ss_pred             -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                             +                                    .|.|.++    +|++||+++||+|++++.+++++++
T Consensus       255 ~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~  330 (500)
T 1o04_A          255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG----SRTFVQEDIYDEFVERSVARAKSRV  330 (500)
T ss_dssp             HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred             HhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCC----CEEEEehhHHHHHHHHHHHHHHhCc
Confidence                   0                                    1356666    9999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|+++++++||+++..+++++.++|+.+.++|+++.+||+.                                     
T Consensus       331 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------------------------------------  373 (500)
T 1o04_A          331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI-------------------------------------  373 (500)
T ss_dssp             BCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSB-------------------------------------
T ss_pred             CCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCcc-------------------------------------
Confidence            9999999999999999999999999998888888887777643                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       374 ---------------------------------------------------------------------~~~~g~~~~PT  384 (500)
T 1o04_A          374 ---------------------------------------------------------------------AADRGYFIQPT  384 (500)
T ss_dssp             ---------------------------------------------------------------------CCSSSSCBCCE
T ss_pred             ---------------------------------------------------------------------CCCCCCeeCCE
Confidence                                                                                 11247899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus       385 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~P  464 (500)
T 1o04_A          385 VFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSP  464 (500)
T ss_dssp             EEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSC
T ss_pred             EEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998766678999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+|+++|.+++++|++.|+++..
T Consensus       465 fGG~k~SG~G~~~G~~gl~~f~~~K~v~~~  494 (500)
T 1o04_A          465 FGGYKMSGSGRELGEYGLQAYTEVKTVTVK  494 (500)
T ss_dssp             BCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred             CCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence            999999999999999999999999998764

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=1.4e-35  Score=321.40  Aligned_cols=260  Identities=37%  Similarity=0.676  Sum_probs=232.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|++ .....+                      
T Consensus       172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~  250 (503)
T 1a4s_A          172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVM  250 (503)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999854 321100                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       251 ~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  326 (503)
T 1a4s_A          251 EMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNG----TRVFVQREIMPQFLEEVVKRTKAIVV  326 (503)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCC----CEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred             HHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----cEEEEehHHHHHHHHHHHHHHHhcCC
Confidence                                                       1356666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++.++|+.+.++|+++.+||+.....+                                 
T Consensus       327 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~---------------------------------  373 (503)
T 1a4s_A          327 GDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSD---------------------------------  373 (503)
T ss_dssp             SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSS---------------------------------
T ss_pred             CCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccc---------------------------------
Confidence            99999999999999999999999999999888888888875310000                                 


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....|+|++|||
T Consensus       374 -------------------------------------------------------------------~~~~~g~~~~PTv  386 (503)
T 1a4s_A          374 -------------------------------------------------------------------PKLKNGYFMSPCV  386 (503)
T ss_dssp             -------------------------------------------------------------------GGGTTSCCBCCEE
T ss_pred             -------------------------------------------------------------------ccccCCceeCCEE
Confidence                                                                               0002478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus       387 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~Pf  466 (503)
T 1a4s_A          387 LDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPF  466 (503)
T ss_dssp             EESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCB
T ss_pred             EecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987666788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ||+|+||+|+++|.+++++|++.|+++...
T Consensus       467 GG~k~SG~G~~~G~~~l~~f~~~k~v~~~~  496 (503)
T 1a4s_A          467 GGYKMSGFGRENGQATVDYYSQLKTVIVEM  496 (503)
T ss_dssp             CCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred             CCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence            999999999999999999999999987653

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=9.8e-36  Score=322.52  Aligned_cols=250  Identities=31%  Similarity=0.490  Sum_probs=224.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....                       
T Consensus       169 ~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~  248 (505)
T 3prl_A          169 AAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS  248 (505)
T ss_dssp             HHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999854321100                       


Q ss_pred             ----h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          59 ----W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        59 ----~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                          +                                    .|.|.++    +|++||+++||+|++++.++++++++|+
T Consensus       249 ~~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~g~  324 (505)
T 3prl_A          249 EKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAI----KRVFVQDSVADQLVANIKELVEQLTVGS  324 (505)
T ss_dssp             HHCCSSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSE----EEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred             HHccCCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccC----ceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence                0                                    1356666    9999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |+ +++++||+++..+++++.++|+.+.++|+++.+||..                                        
T Consensus       325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~----------------------------------------  363 (505)
T 3prl_A          325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR----------------------------------------  363 (505)
T ss_dssp             TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE----------------------------------------
T ss_pred             CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC----------------------------------------
Confidence            99 9999999999999998888888877777666666531                                        


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                           .|+|++|||+.
T Consensus       364 ---------------------------------------------------------------------~g~~~~PTvl~  374 (505)
T 3prl_A          364 ---------------------------------------------------------------------QGNLLSPTLLD  374 (505)
T ss_dssp             ---------------------------------------------------------------------ETTEECCEEEE
T ss_pred             ---------------------------------------------------------------------CCceeCCeEee
Confidence                                                                                 46899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCCcc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAPFG  337 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfG  337 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+|||
T Consensus       375 ~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFG  454 (505)
T 3prl_A          375 DVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFL  454 (505)
T ss_dssp             SCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBC
T ss_pred             cCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999997654 46889999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |+|+||+|+++|.+++++|++.|+++..
T Consensus       455 G~k~SG~Gr~~g~~~~~~f~~~k~v~~~  482 (505)
T 3prl_A          455 GVKKSGLGVQGIKPSLLSMTRERVTVLN  482 (505)
T ss_dssp             CEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             CcCcCCCCcCccHHHHHHhhceEEEEEe
Confidence            9999999999999999999999998765

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=2e-35  Score=318.32  Aligned_cols=254  Identities=31%  Similarity=0.476  Sum_probs=230.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.++++++.++|+|+|++|+|+|+++.+..++                      
T Consensus       143 ~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~  222 (462)
T 3etf_A          143 VLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGA  222 (462)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998543211100                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++||+|+++++++.+++++|
T Consensus       223 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~G  298 (462)
T 3etf_A          223 QAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAA----KRFIVEEGIAQAFTDRFVAAAAALKMG  298 (462)
T ss_dssp             HHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred             HHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCC----cEEEEehhHHHHHHHHHHHHHHhhcCC
Confidence                                                      1356666    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.++++.+||+++..+++++.++++.+.++|+++.+||..                                       
T Consensus       299 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~---------------------------------------  339 (462)
T 3etf_A          299 DPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEK---------------------------------------  339 (462)
T ss_dssp             CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB---------------------------------------
T ss_pred             CCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---------------------------------------
Confidence            99999999999999999999999888888888887777653                                       


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                         ....|+|++|||+
T Consensus       340 -------------------------------------------------------------------~~~~g~~~~Ptvl  352 (462)
T 3etf_A          340 -------------------------------------------------------------------IAGEGNYYAATVL  352 (462)
T ss_dssp             -------------------------------------------------------------------CSSSSCCBCCEEE
T ss_pred             -------------------------------------------------------------------cCCCCcEEeeEEE
Confidence                                                                               1235789999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|||
T Consensus       353 ~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfG  432 (462)
T 3etf_A          353 ADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFG  432 (462)
T ss_dssp             ESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBC
T ss_pred             ECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999877778899999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |+|.||+|+++|.+++++|++.|+++..
T Consensus       433 G~k~SG~G~~~g~~g~~~~~~~k~v~~~  460 (462)
T 3etf_A          433 GVKKSGFGRELSHFGLHEFCNVQTVWKN  460 (462)
T ss_dssp             CSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred             CcCCCCCCccchHHHHHHHhceeEEEEe
Confidence            9999999999999999999999998765

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=3.3e-35  Score=317.50  Aligned_cols=253  Identities=34%  Similarity=0.592  Sum_probs=228.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|++++....+                      
T Consensus       159 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~  238 (479)
T 2imp_A          159 IARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM  238 (479)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999765422110                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~  314 (479)
T 2imp_A          239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCA----ERVYVQKGIYDQFVNRLGEAMQAVQF  314 (479)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSC----SEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred             HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCC----cEEEEehhhHHHHHHHHHHHHHhccc
Confidence                                                       0356665    99999999999999999999999999


Q ss_pred             CCCCC-CCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          97 GDPFD-KSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        97 g~~~~-~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      |+|.+ +++++||+++..+++++.++|+.+.++|+++.+||+..                                    
T Consensus       315 g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~------------------------------------  358 (479)
T 2imp_A          315 GNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAV------------------------------------  358 (479)
T ss_dssp             SCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCC------------------------------------
T ss_pred             CCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCccc------------------------------------
Confidence            99999 99999999999999999999988888888777776421                                    


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                            ...|+|++||
T Consensus       359 ----------------------------------------------------------------------~~~g~~~~Pt  368 (479)
T 2imp_A          359 ----------------------------------------------------------------------EGKGYYYPPT  368 (479)
T ss_dssp             ----------------------------------------------------------------------CSSSCCCCCE
T ss_pred             ----------------------------------------------------------------------CCCCceECCE
Confidence                                                                                  1247889999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus       369 vl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~P  448 (479)
T 2imp_A          369 LLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGF  448 (479)
T ss_dssp             EEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSC
T ss_pred             EEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997655578999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      |||+|+||+|+++|.+++++|++.|+++.
T Consensus       449 fGG~k~SG~G~~~g~~~l~~~~~~k~v~~  477 (479)
T 2imp_A          449 HAGWRKSGIGGADGKHGLHEYLQTQVVYL  477 (479)
T ss_dssp             BCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred             CCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence            99999999999999999999999998865

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=3.2e-35  Score=316.99  Aligned_cols=249  Identities=35%  Similarity=0.553  Sum_probs=224.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHc----CCCCccEEEecCCCCCChhhh------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGPMSAPYW------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~a----GlP~gvv~vv~g~~~~~~~~~------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.++++++.++    |+|+|++|+|+|++++....+                  
T Consensus       147 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g  226 (486)
T 3pqa_A          147 SAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVG  226 (486)
T ss_dssp             HHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHH
Confidence            5789999999999999999999999999999999999    999999999999765421100                  


Q ss_pred             ---------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099          60 ---------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR   94 (605)
Q Consensus        60 ---------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~   94 (605)
                                                                   .|.|.++    +|++||+++||+|++++.++++++
T Consensus       227 ~~i~~~aa~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~  302 (486)
T 3pqa_A          227 ELITKKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISV----GMILVDESIADKFIEMFVNKAKVL  302 (486)
T ss_dssp             HHHHHHCCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred             HHHHHHcCCCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCC----cEEEEeHHHHHHHHHHHHHHHHhc
Confidence                                                         1356666    999999999999999999999999


Q ss_pred             ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      ++|+|+++++++||+++..+++++.++|+.++++|+++.+||.                                     
T Consensus       303 ~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~-------------------------------------  345 (486)
T 3pqa_A          303 NVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------------------------------------  345 (486)
T ss_dssp             CBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------------------------------------
T ss_pred             ccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCC-------------------------------------
Confidence            9999999999999999999999888888877777766666553                                     


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                           .   .|+|++|
T Consensus       346 ---------------------------------------------------------------------~---~g~~~~P  353 (486)
T 3pqa_A          346 ---------------------------------------------------------------------R---DKALFYP  353 (486)
T ss_dssp             ---------------------------------------------------------------------E---ETTEECC
T ss_pred             ---------------------------------------------------------------------C---CCcEecc
Confidence                                                                                 1   3689999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQ  333 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~  333 (605)
                      ||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.
T Consensus       354 tvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~  431 (486)
T 3pqa_A          354 TIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDN  431 (486)
T ss_dssp             EEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTT
T ss_pred             EEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCC
Confidence            999 9999999999999999999999999 999999999999999999999999999999999999999997643 3458


Q ss_pred             CCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         334 APFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +||||+|+||+|+++|.+++++|++.|+++..
T Consensus       432 ~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~  463 (486)
T 3pqa_A          432 MPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS  463 (486)
T ss_dssp             SCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             CCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence            99999999999999999999999999998765

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=4.6e-35  Score=318.32  Aligned_cols=261  Identities=40%  Similarity=0.682  Sum_probs=232.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|++.+....+                      
T Consensus       179 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~  258 (515)
T 2d4e_A          179 STWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM  258 (515)
T ss_dssp             HHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             hhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999754321110                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++++++++
T Consensus       259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  334 (515)
T 2d4e_A          259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTAS----SRLLVEEKIFEDFVGKVVERARAIRV  334 (515)
T ss_dssp             HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCC----CEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred             HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCC----eEEEEehhHHHHHHHHHHHHHhhccc
Confidence                                                       1456666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.++++++||+++..+++++.++|+.+.++|+++.+||+.+....                                 
T Consensus       335 g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~---------------------------------  381 (515)
T 2d4e_A          335 GHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSF---------------------------------  381 (515)
T ss_dssp             CCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCT---------------------------------
T ss_pred             CCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccc---------------------------------
Confidence            99999999999999999999999999999999999988886410000                                 


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                               .+        .....|+|++|||
T Consensus       382 ---------------------------------------------------------~~--------~~~~~g~~~~PTv  396 (515)
T 2d4e_A          382 ---------------------------------------------------------RG--------EDLSRGNYLLPTV  396 (515)
T ss_dssp             ---------------------------------------------------------TS--------CBCTTTTCBCCEE
T ss_pred             ---------------------------------------------------------cc--------cccCCCceeCCEE
Confidence                                                                     00        0002478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+||
T Consensus       397 l~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~Pf  475 (515)
T 2d4e_A          397 FVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPF  475 (515)
T ss_dssp             EEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCB
T ss_pred             EeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCC
Confidence            999 9999999999999999999999999999999999999999999999999999999999999999987767789999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|+||+|+++|.+++++|++.|+++..
T Consensus       476 GG~k~SG~Gr~~G~~gl~~~~~~K~v~~~  504 (515)
T 2d4e_A          476 GGVKGSGDRREGGTYALDFYTDLKTIALP  504 (515)
T ss_dssp             CCSGGGBCSCBSHHHHHHHHEEEEEEEEE
T ss_pred             CCcCCCCCCccchHHHHHHhCceeEEEEc
Confidence            99999999999999999999999998764

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=4.4e-35  Score=319.49  Aligned_cols=253  Identities=33%  Similarity=0.593  Sum_probs=229.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+...                        
T Consensus       189 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~  268 (538)
T 3qan_A          189 MVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY  268 (538)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999996543210                        


Q ss_pred             -----h------hh------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          58 -----Y------WR------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        58 -----~------~~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                           .      +.                                    |.|.++    +|++||+++||+|++++.++
T Consensus       269 ~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~  344 (538)
T 3qan_A          269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAG----SRAVIHKDVYDEVLEKTVAL  344 (538)
T ss_dssp             HHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCC----CEEEEETTTHHHHHHHHHHH
T ss_pred             HHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccC----ceeEEehHHHHHHHHHHHHH
Confidence                 0      11                                    356666    99999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ  170 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~  170 (605)
                      .+++++|+|.++++++||+++..+++++..+|+.+.++| ++.+||..+                               
T Consensus       345 ~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~-------------------------------  392 (538)
T 3qan_A          345 AKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD-------------------------------  392 (538)
T ss_dssp             HTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEE-------------------------------
T ss_pred             HHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcC-------------------------------
Confidence            999999999999999999999999999999999888888 877777531                               


Q ss_pred             EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099         171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  250 (605)
Q Consensus       171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~  250 (605)
                                                                                                 ...|+
T Consensus       393 ---------------------------------------------------------------------------~~~g~  397 (538)
T 3qan_A          393 ---------------------------------------------------------------------------SSTGF  397 (538)
T ss_dssp             ---------------------------------------------------------------------------CSSSC
T ss_pred             ---------------------------------------------------------------------------CCCCc
Confidence                                                                                       12589


Q ss_pred             eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEe-ccCC
Q psy1099         251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN-CYQA  329 (605)
Q Consensus       251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN-~~~~  329 (605)
                      |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|| ....
T Consensus       398 ~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~  477 (538)
T 3qan_A          398 FIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTG  477 (538)
T ss_dssp             EECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCC
T ss_pred             eeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999 5544


Q ss_pred             c-CCCCCccccccCCCc-hHHhHHhhhcccceeEEEec
Q psy1099         330 V-VPQAPFGGFKESGIG-RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       330 ~-~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s  365 (605)
                      . .+.+||||+|.||+| +++|.+++++|++.|+++..
T Consensus       478 ~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~  515 (538)
T 3qan_A          478 AIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEM  515 (538)
T ss_dssp             CCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEE
T ss_pred             CCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEe
Confidence            3 789999999999999 99999999999999998765

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-35  Score=318.74  Aligned_cols=258  Identities=29%  Similarity=0.499  Sum_probs=231.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|+++.+..++                      
T Consensus       179 ~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~  258 (521)
T 4e4g_A          179 PMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYG  258 (521)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998643211100                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccc-cHHHHHHHHHHHHhcCcc
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQED-IYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~-i~~~~~~~l~~~~~~~~v   96 (605)
                                                                .|.|.++    +|++||++ +||+|++++.++++++++
T Consensus       259 ~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~~i~d~f~~~l~~~~~~~~v  334 (521)
T 4e4g_A          259 TAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAI----SVAVPVGEETANRLIDKLVPMVESLRI  334 (521)
T ss_dssp             HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSE----EEEEEBSHHHHHHHHHHHHHHHHTCCB
T ss_pred             HHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccC----eEEEEeCchHHHHHHHHHHHHHHhccC
Confidence                                                      1456666    89999999 999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++.++|+.+.++|+++.+||.....                                   
T Consensus       335 G~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~-----------------------------------  379 (521)
T 4e4g_A          335 GPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKL-----------------------------------  379 (521)
T ss_dssp             CCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCC-----------------------------------
T ss_pred             CCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCC-----------------------------------
Confidence            999999999999999999999999999999999998888864100                                   


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....|+|++|||
T Consensus       380 -------------------------------------------------------------------~~~~~g~~~~PTv  392 (521)
T 4e4g_A          380 -------------------------------------------------------------------QGYENGHFIGGCL  392 (521)
T ss_dssp             -------------------------------------------------------------------TTCTTSCCCCCEE
T ss_pred             -------------------------------------------------------------------CcCCCCcEECCEE
Confidence                                                                               0013589999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCCC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAP  335 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~p  335 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..... .+.+|
T Consensus       393 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~P  472 (521)
T 4e4g_A          393 FDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHS  472 (521)
T ss_dssp             EESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSC
T ss_pred             EEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999976443 47899


Q ss_pred             ccccccCCCc--hHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIG--RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G--~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+|  +++|.+++++|++.|+++..
T Consensus       473 fGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~  504 (521)
T 4e4g_A          473 FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR  504 (521)
T ss_dssp             BCCEETTEESSCCBSHHHHHHHTEEEEEEEEC
T ss_pred             cCCcccCCCCCCccchHHHHHHhheEEEEEEe
Confidence            9999999999  78999999999999998765

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=5.2e-35  Score=316.10  Aligned_cols=253  Identities=38%  Similarity=0.597  Sum_probs=226.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEec---CCCCCChh-h-------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLP---GYGPMSAP-Y-------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~---g~~~~~~~-~-------------------   58 (605)
                      ++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+   |++.+... +                   
T Consensus       163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~  242 (487)
T 2w8n_A          163 ITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK  242 (487)
T ss_dssp             HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence            468999999999999999999999999999999999999999999999   74321110 0                   


Q ss_pred             ---------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          59 ---------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        59 ---------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                               +                                    .|.|.++    +|++||+++||+|+++++++.++
T Consensus       243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~  318 (487)
T 2w8n_A          243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCS----NQFLVQRGIHDAFVKAFAEAMKK  318 (487)
T ss_dssp             HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEE----EEEEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccC----CEEEEcccHHHHHHHHHHHHHHh
Confidence                     0                                    0356665    89999999999999999999999


Q ss_pred             -CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEE
Q psy1099          94 -RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI  172 (605)
Q Consensus        94 -~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~  172 (605)
                       +++|+|+++++++||+++..+++++.++|+.+.++|+++.+||+.                                  
T Consensus       319 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~----------------------------------  364 (487)
T 2w8n_A          319 NLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR----------------------------------  364 (487)
T ss_dssp             HCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSB----------------------------------
T ss_pred             hcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc----------------------------------
Confidence             999999999999999999999999988888887777777666642                                  


Q ss_pred             EecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe-e
Q psy1099         173 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY-F  251 (605)
Q Consensus       173 v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~-~  251 (605)
                                                                                              . ..|+ |
T Consensus       365 ------------------------------------------------------------------------~-~~g~~~  371 (487)
T 2w8n_A          365 ------------------------------------------------------------------------H-QLGKNF  371 (487)
T ss_dssp             ------------------------------------------------------------------------C-TTCTTC
T ss_pred             ------------------------------------------------------------------------C-CCCCce
Confidence                                                                                    1 1467 8


Q ss_pred             eeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcC
Q psy1099         252 IEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVV  331 (605)
Q Consensus       252 ~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~  331 (605)
                      ++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......
T Consensus       372 ~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~  451 (487)
T 2w8n_A          372 FEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISS  451 (487)
T ss_dssp             BCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCC
T ss_pred             ECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999866666


Q ss_pred             CCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         332 PQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       332 ~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +.+||||+|.||+|+++|.+++++|++.|+++..
T Consensus       452 ~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~  485 (487)
T 2w8n_A          452 VECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG  485 (487)
T ss_dssp             TTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred             CCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence            7899999999999999999999999999998754

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=4.4e-35  Score=317.45  Aligned_cols=251  Identities=27%  Similarity=0.460  Sum_probs=225.3

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|+++.+..+                       
T Consensus       174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~  253 (501)
T 1uxt_A          174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK  253 (501)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999865211100                       


Q ss_pred             ---h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCCC
Q psy1099          59 ---W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP   99 (605)
Q Consensus        59 ---~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~~   99 (605)
                         +                                    .|.|.++    +|++||+++||+|++++.++++++++|+|
T Consensus       254 ~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  329 (501)
T 1uxt_A          254 VGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI----KLVLAERPVYGKLVEEVAKRLSSLRVGDP  329 (501)
T ss_dssp             HHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred             hcCCCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCC----cEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence               0                                    1456666    99999999999999999999999999999


Q ss_pred             CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCHH
Q psy1099         100 FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD  179 (605)
Q Consensus       100 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~  179 (605)
                      .++++++||+++..+++++.++|+.+.++|+++.+||+                                          
T Consensus       330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~------------------------------------------  367 (501)
T 1uxt_A          330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR------------------------------------------  367 (501)
T ss_dssp             TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC------------------------------------------
T ss_pred             cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCc------------------------------------------
Confidence            99999999999999998888888777666666555542                                          


Q ss_pred             HHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCC-eeeeeeEee
Q psy1099         180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG-YFIEPTVFS  258 (605)
Q Consensus       180 ~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g-~~~~Ptvl~  258 (605)
                                                                                      .   .| +|++|||+.
T Consensus       368 ----------------------------------------------------------------~---~g~~~~~Ptvl~  380 (501)
T 1uxt_A          368 ----------------------------------------------------------------R---LGPTYVQPTFVE  380 (501)
T ss_dssp             ----------------------------------------------------------------B---CSSSCBCCEEEE
T ss_pred             ----------------------------------------------------------------c---CCCceECCEEEe
Confidence                                                                            2   36 788999999


Q ss_pred             ccC---cchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc-CCcCCCC
Q psy1099         259 NVT---DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY-QAVVPQA  334 (605)
Q Consensus       259 ~v~---~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~-~~~~~~~  334 (605)
                      +++   ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.. +...+.+
T Consensus       381 ~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~  460 (501)
T 1uxt_A          381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYY  460 (501)
T ss_dssp             CCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSS
T ss_pred             CCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCC
Confidence            999   999999999999999999999999999999999999999999999999999999999999999987 6667899


Q ss_pred             CccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         335 PFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||||+|+||+|+++|.+++++|++.|+++..
T Consensus       461 PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~  491 (501)
T 1uxt_A          461 PFGGRKKSGVFREGIGYAVEAVTAYKTIVFN  491 (501)
T ss_dssp             CBCCEETTEESCBSTTTTHHHHEEEEEEEEE
T ss_pred             CCCCcCCCCCCccChHHHHHHhCceeEEEEe
Confidence            9999999999999999999999999998765

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=7.7e-35  Score=314.80  Aligned_cols=255  Identities=40%  Similarity=0.697  Sum_probs=210.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|+|++......+                      
T Consensus       156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~  235 (478)
T 3ty7_A          156 TSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM  235 (478)
T ss_dssp             HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred             HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999654322110                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++.+++++
T Consensus       236 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  311 (478)
T 3ty7_A          236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAG----TRVLVPNKIKDAFLAELKEQFSQVRV  311 (478)
T ss_dssp             CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCC----CEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred             HHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCC----CeEEEcHHHHHHHHHHHHHHHHhccC
Confidence                                                       1356666    99999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++.+||+++..+++++.++|+.+.+.|+++.+||....                                    
T Consensus       312 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~------------------------------------  355 (478)
T 3ty7_A          312 GNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP------------------------------------  355 (478)
T ss_dssp             SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC------------------------------------
T ss_pred             CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc------------------------------------
Confidence            99999999999999999999999999999888888888874210                                    


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                         .....|+|++|||
T Consensus       356 -------------------------------------------------------------------~~~~~g~~~~Ptv  368 (478)
T 3ty7_A          356 -------------------------------------------------------------------EGLEKGYFARPTI  368 (478)
T ss_dssp             -------------------------------------------------------------------TTCCSSCCCCCEE
T ss_pred             -------------------------------------------------------------------cccCCCceeCCEE
Confidence                                                                               0012588999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. +...+.+||
T Consensus       369 l~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~Pf  447 (478)
T 3ty7_A          369 FINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPF  447 (478)
T ss_dssp             EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC-------
T ss_pred             EecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999998 666788999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      ||+|+||+|+++|.+++++|++.|+++.
T Consensus       448 GG~k~SG~G~~~G~~~l~~~t~~k~v~~  475 (478)
T 3ty7_A          448 GGYKQSGLGREWGDYGIEEFLEVKSIAG  475 (478)
T ss_dssp             ---------------CCGGGEEEEEEET
T ss_pred             CCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence            9999999999999999999999998874

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=8.9e-35  Score=315.23  Aligned_cols=254  Identities=27%  Similarity=0.443  Sum_probs=224.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHH----cCCCCccEEEecCCCCCChhhh------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQ----AGFPDGVISVLPGYGPMSAPYW------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~----aGlP~gvv~vv~g~~~~~~~~~------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.++++++.+    +|+|+|++|+|+|+.+.+..++                  
T Consensus       174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~  253 (500)
T 2j6l_A          174 YGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGK  253 (500)
T ss_dssp             HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred             HHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHH
Confidence            478999999999999999999999999999988775    5999999999998322111000                  


Q ss_pred             ----------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          60 ----------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        60 ----------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                                                                    .|.|.++    +|++||+++||+|++++.+.+++
T Consensus       254 ~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~  329 (500)
T 2j6l_A          254 QVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTA----RRLFIHESIHDEVVNRLKKAYAQ  329 (500)
T ss_dssp             HHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEETTTHHHHHHHHHHHHHT
T ss_pred             HHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCC----cEEEEcHHHHHHHHHHHHHHhhh
Confidence                                                          1456666    99999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|.++++++||+++..+++++.++|+.+.++|+++.+||+.                                   
T Consensus       330 ~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~-----------------------------------  374 (500)
T 2j6l_A          330 IRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKV-----------------------------------  374 (500)
T ss_dssp             CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB-----------------------------------
T ss_pred             cccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcc-----------------------------------
Confidence            999999999999999999999999999998888888877777743                                   


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                             ....|+|++
T Consensus       375 -----------------------------------------------------------------------~~~~g~~~~  383 (500)
T 2j6l_A          375 -----------------------------------------------------------------------MDRPGNYVE  383 (500)
T ss_dssp             -----------------------------------------------------------------------CSSSSSCBC
T ss_pred             -----------------------------------------------------------------------cCCCCCEEc
Confidence                                                                                   112478999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHH--HHhhcccEEEeccCC-c
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA--HAINAGSVWINCYQA-V  330 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~--~~~~~g~v~iN~~~~-~  330 (605)
                      |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++  +++++|+|+||.... .
T Consensus       384 PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~  463 (500)
T 2j6l_A          384 PTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGA  463 (500)
T ss_dssp             CEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCC
T ss_pred             CEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccC
Confidence            9999999999999999999999999999999999999999999999999999999999999  779999999997543 3


Q ss_pred             CCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       331 ~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      .+.+||||+|.||+|+++|.+++++|++.|+++..
T Consensus       464 ~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~  498 (500)
T 2j6l_A          464 EIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN  498 (500)
T ss_dssp             CTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred             CCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence            56899999999999999999999999999998753

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=9.2e-35  Score=314.79  Aligned_cols=251  Identities=32%  Similarity=0.497  Sum_probs=205.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhH-HHHHHHHHHcCCCCccEEEecCCCCCC-hhh---------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTA-LYVAALTQQAGFPDGVISVLPGYGPMS-APY---------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~-~~l~~ll~~aGlP~gvv~vv~g~~~~~-~~~---------------------   58 (605)
                      ++|++++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+|+|++++. ..+                     
T Consensus       160 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i  239 (485)
T 4dng_A          160 SMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI  239 (485)
T ss_dssp             HHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence            578999999999999999999999999 999999999999999999999865421 100                     


Q ss_pred             -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                             +                                    .|.|.++    +|++||+++||+|++++.++.++++
T Consensus       240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~  315 (485)
T 4dng_A          240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMII----NRIIVHQDVYDEFVEKFTARVKQLP  315 (485)
T ss_dssp             HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCE----EEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccC----CEEEEeHHHHHHHHHHHHHHHHhcc
Confidence                   0                                    1356666    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.++++.+||+++..+++++.++++.+.++|+++.+||.                                      
T Consensus       316 ~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~--------------------------------------  357 (485)
T 4dng_A          316 YGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK--------------------------------------  357 (485)
T ss_dssp             BSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC--------------------------------------
T ss_pred             CCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCC--------------------------------------
Confidence            999999999999999999988888888777776666665553                                      


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                          .   .|+|++||
T Consensus       358 --------------------------------------------------------------------~---~g~~~~Pt  366 (485)
T 4dng_A          358 --------------------------------------------------------------------R---VGNVLTPY  366 (485)
T ss_dssp             --------------------------------------------------------------------E---ETTEECCE
T ss_pred             --------------------------------------------------------------------C---CCcEECCE
Confidence                                                                                2   47899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQA  334 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~  334 (605)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+
T Consensus       367 vl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~  446 (485)
T 4dng_A          367 VFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNI  446 (485)
T ss_dssp             EEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC--------
T ss_pred             EEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997653 47889


Q ss_pred             CccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         335 PFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||||+|.||+|+++|.+++++|++.|+++..
T Consensus       447 pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~  477 (485)
T 4dng_A          447 AFGGNKASGVGRFGNPWVVEEFTVTKWISIQ  477 (485)
T ss_dssp             --------------CHHHHHHHEEEEEEEEE
T ss_pred             CcCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence            9999999999999999999999999998765

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=8.6e-35  Score=315.99  Aligned_cols=251  Identities=34%  Similarity=0.542  Sum_probs=208.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhH-HHHHHHHHHcCCCCccEEEecCCCCCChh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTA-LYVAALTQQAGFPDGVISVLPGYGPMSAP-----------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~-~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-----------------------   57 (605)
                      ++|++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|+|++.+...                       
T Consensus       165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i  244 (508)
T 3r64_A          165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV  244 (508)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence            468999999999999999999999999 99999999999999999999997543211                       


Q ss_pred             --------hh------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099          58 --------YW------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA   93 (605)
Q Consensus        58 --------~~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~   93 (605)
                              .+                                    .|.|.++    +|++||+++||+|++++.+++++
T Consensus       245 ~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~  320 (508)
T 3r64_A          245 GELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSI----NRVIVDAAVHDEFLEKFVEAVKN  320 (508)
T ss_dssp             HHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCC----SEEEEEHHHHHHHHHHHHHHHHT
T ss_pred             HHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccC----cEEEEehhHHHHHHHHHHHHHHh
Confidence                    00                                    0346665    99999999999999999999999


Q ss_pred             CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099          94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII  173 (605)
Q Consensus        94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v  173 (605)
                      +++|+|.++++++||+++..+++++.++|+.+.++|+++.+||.                                    
T Consensus       321 ~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~------------------------------------  364 (508)
T 3r64_A          321 IPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP------------------------------------  364 (508)
T ss_dssp             CCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCC------------------------------------
T ss_pred             ccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCC------------------------------------
Confidence            99999999999999999999988888887777666666655553                                    


Q ss_pred             ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099         174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE  253 (605)
Q Consensus       174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~  253 (605)
                                                                                            .   .|+|++
T Consensus       365 ----------------------------------------------------------------------~---~g~~~~  371 (508)
T 3r64_A          365 ----------------------------------------------------------------------I---EGRLVH  371 (508)
T ss_dssp             ----------------------------------------------------------------------E---ETTEEC
T ss_pred             ----------------------------------------------------------------------C---CCcEEe
Confidence                                                                                  2   468999


Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCC
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVP  332 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~  332 (605)
                      |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+
T Consensus       372 Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~  451 (508)
T 3r64_A          372 PHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEP  451 (508)
T ss_dssp             CEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC-------
T ss_pred             cEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999997653 378


Q ss_pred             CCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         333 QAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       333 ~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      .+||||+|.||+|+++|.+++++|++.|+++..
T Consensus       452 ~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~  484 (508)
T 3r64_A          452 HVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIK  484 (508)
T ss_dssp             -------------CCCHHHHHHHTEEEEEEEEE
T ss_pred             CCCcCCcCCCCCCcCccHHHHHHhhceEEEEEe
Confidence            899999999999999999999999999988765

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=9.2e-35  Score=312.41  Aligned_cols=247  Identities=26%  Similarity=0.405  Sum_probs=218.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.++++++.++ +|+|++|+|+|+++.+..++                      
T Consensus       137 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~  215 (469)
T 3sza_A          137 TIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTA  215 (469)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHH
Confidence            5789999999999999999999999999999999998 99999999998543211100                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|++||+++||+|++++.++++++ +|+
T Consensus       216 aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~-~g~  290 (469)
T 3sza_A          216 AAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAP----DYILCDPSIQNQIVEKLKKSLKEF-YGE  290 (469)
T ss_dssp             HHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSC----CEEEECGGGHHHHHHHHHHHHHHH-HCS
T ss_pred             HhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----cEEEEehhHHHHHHHHHHHHHHHh-cCC
Confidence                                                     1456666    999999999999999999999887 699


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |.++++++||+++..+++++.++|     +|+++.+||.                                         
T Consensus       291 ~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~-----------------------------------------  324 (469)
T 3sza_A          291 DAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGT-----------------------------------------  324 (469)
T ss_dssp             CGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCC-----------------------------------------
T ss_pred             CCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCc-----------------------------------------
Confidence            999999999999999988887766     4556555553                                         


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                       .. ..|+|++|||+.
T Consensus       325 -----------------------------------------------------------------~~-~~g~~~~PTvl~  338 (469)
T 3sza_A          325 -----------------------------------------------------------------GD-AATRYIAPTILT  338 (469)
T ss_dssp             -----------------------------------------------------------------EE-TTTTEECCEEEE
T ss_pred             -----------------------------------------------------------------cC-CCCceeCCeeec
Confidence                                                                             21 257899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcCCCCCc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQAPF  336 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~~~~pf  336 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||...  ...+.+||
T Consensus       339 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~Pf  418 (469)
T 3sza_A          339 DVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPF  418 (469)
T ss_dssp             SCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCB
T ss_pred             CCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999754  44689999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ||+|+||+|+++|.+++++|++.|+++..+
T Consensus       419 GG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~  448 (469)
T 3sza_A          419 GGVGNSGMGSYHGKKSFETFSHRRSCLVRP  448 (469)
T ss_dssp             CCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred             CCccccccCccchHHHHHHhhCeeEEEECC
Confidence            999999999999999999999999988764

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=1.1e-34  Score=313.19  Aligned_cols=256  Identities=29%  Similarity=0.442  Sum_probs=230.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++..+++++.++|+|+|++|+++|+.+.+..++                      
T Consensus       143 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~a  222 (474)
T 4h7n_A          143 SMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETA  222 (474)
T ss_dssp             HHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHH
T ss_pred             HhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhh
Confidence            5789999999999999999999999999999999999999999999998644321100                      


Q ss_pred             ----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCCC
Q psy1099          60 ----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP   99 (605)
Q Consensus        60 ----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~~   99 (605)
                                                              .|.|.++    +|++||+++|++|++++++...++++|+|
T Consensus       223 a~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  298 (474)
T 4h7n_A          223 ARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSI----ERIYVAESKFEEFYHQLIAKAHRLQLAYP  298 (474)
T ss_dssp             HHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEGGGHHHHHHHHHHHHHHCCBCCS
T ss_pred             hcccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeec----ccccchHHHHHHHHHHHHHHhhccccCCC
Confidence                                                    1456666    99999999999999999999999999999


Q ss_pred             CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCHH
Q psy1099         100 FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD  179 (605)
Q Consensus       100 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~  179 (605)
                      .++++.+||+++..+.+++..+++.+.++|+++..||...                                        
T Consensus       299 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~----------------------------------------  338 (474)
T 4h7n_A          299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVE----------------------------------------  338 (474)
T ss_dssp             SGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCE----------------------------------------
T ss_pred             cccccccCccccHHHHHHHHHHHHHHHhhCceeccCCccc----------------------------------------
Confidence            9999999999999999999999999998888888887531                                        


Q ss_pred             HHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEeec
Q psy1099         180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN  259 (605)
Q Consensus       180 ~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~  259 (605)
                                                                                       ....|+|++|||+.+
T Consensus       339 -----------------------------------------------------------------~~~~g~~~~Ptv~~~  353 (474)
T 4h7n_A          339 -----------------------------------------------------------------ELGGGWWCRPTVMTN  353 (474)
T ss_dssp             -----------------------------------------------------------------EETTEEECCCEEEES
T ss_pred             -----------------------------------------------------------------ccCCCcccCceeEEe
Confidence                                                                             013589999999999


Q ss_pred             cCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--CCcCCCCCcc
Q psy1099         260 VTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--QAVVPQAPFG  337 (605)
Q Consensus       260 v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~~~~~~~pfG  337 (605)
                      ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..  +...+..|||
T Consensus       354 v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfg  433 (474)
T 4h7n_A          354 VNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKN  433 (474)
T ss_dssp             CCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCC
T ss_pred             eccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999964  3446789999


Q ss_pred             ccccCCCc-hHHhHHhhhcccceeEEEecC
Q psy1099         338 GFKESGIG-RELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       338 G~~~SG~G-~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      |+|.||+| +++|.+++++|++.|+++...
T Consensus       434 G~~~SG~G~~~~G~~g~~~f~~~k~v~~~~  463 (474)
T 4h7n_A          434 AFNFSGLGGSRVGAAGLKRFLRKQAFLIKT  463 (474)
T ss_dssp             CCGGGEESCCSSTTHHHHTTEEEEEEEEEC
T ss_pred             CcCCCCCCCCcchHHHHHHhCeEEEEEECC
Confidence            99999998 788999999999999987653

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=1e-34  Score=313.42  Aligned_cols=250  Identities=32%  Similarity=0.479  Sum_probs=223.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-h----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-Y----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~----------------------   58 (605)
                      ++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|++.+... +                      
T Consensus       160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~  239 (475)
T 1euh_A          160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG  239 (475)
T ss_dssp             HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence            46899999999999999999999999999999999999999999999986432110 0                      


Q ss_pred             ----h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          59 ----W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        59 ----~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                          +                                    .|.|.++    +|++||+++|++|++++.++++++++|+
T Consensus       240 ~~aa~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g~  315 (475)
T 1euh_A          240 KMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAV----KRVLVMESVADELVEKIREKVLALTIGN  315 (475)
T ss_dssp             HHTTTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSE----EEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred             HhcCCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCC----cEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence                0                                    1356666    9999999999999999999999999999


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |.+ ++++||+++..+++++.++++.+.++|+++.+||+                                         
T Consensus       316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~-----------------------------------------  353 (475)
T 1euh_A          316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIK-----------------------------------------  353 (475)
T ss_dssp             GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC-----------------------------------------
T ss_pred             ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCc-----------------------------------------
Confidence            999 99999999999999888888777666666555442                                         


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                       .   .|+|++|||+.
T Consensus       354 -----------------------------------------------------------------~---~g~~~~Ptvl~  365 (475)
T 1euh_A          354 -----------------------------------------------------------------R---EGNLICPILFD  365 (475)
T ss_dssp             -----------------------------------------------------------------E---ETTEECCEEEE
T ss_pred             -----------------------------------------------------------------c---CCceeCCEEEe
Confidence                                                                             2   36889999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEec-cCCcCCCCCcc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINC-YQAVVPQAPFG  337 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~-~~~~~~~~pfG  337 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. +....+.+|||
T Consensus       366 ~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfG  445 (475)
T 1euh_A          366 KVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFL  445 (475)
T ss_dssp             SCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBC
T ss_pred             CCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999998 66557899999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |+|.||+|+++|.+++++|++.|+++..
T Consensus       446 G~k~SG~G~~~g~~~~~~~~~~k~v~~~  473 (475)
T 1euh_A          446 GAKKSGAGIQGVKYSIEAMTTVKSVVFD  473 (475)
T ss_dssp             CEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             CCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence            9999999999999999999999988754

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=1.5e-33  Score=308.05  Aligned_cols=253  Identities=27%  Similarity=0.471  Sum_probs=224.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      .+|+++||| +||+||||||+.+|+++.+|+++|++||+|+|++|+|+|++.+...                        
T Consensus       217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~  295 (563)
T 4e3x_A          217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW  295 (563)
T ss_dssp             HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            368999999 6999999999999999999999999999999999999986432110                        


Q ss_pred             -----h---------h---------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          58 -----Y---------W---------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        58 -----~---------~---------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                           .         +                                 .|.|.++    +|+|||+++||+|+++|+++
T Consensus       296 ~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~----~rv~V~~si~d~f~~~l~~~  371 (563)
T 4e3x_A          296 RQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSAC----SRLYVPKSLWPQIKGRLLEE  371 (563)
T ss_dssp             HHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEGGGHHHHHHHHHHH
T ss_pred             HHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCC----cEEEEecchHHHHHHHHHHH
Confidence                 0         0                                 1356666    99999999999999999999


Q ss_pred             HhcCccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHH-cCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099          91 AAARKVGDP-FDKSVQQGPQVDAVMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP  168 (605)
Q Consensus        91 ~~~~~vg~~-~~~~~~~gp~i~~~~~~~~~~~i~~a~~-~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp  168 (605)
                      ++++++|+| +++++++||+|++.+++++..+|+.+.+ .|+++..||..                              
T Consensus       372 ~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~------------------------------  421 (563)
T 4e3x_A          372 HSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQC------------------------------  421 (563)
T ss_dssp             HHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCE------------------------------
T ss_pred             HHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCcc------------------------------
Confidence            999999999 9999999999999999999999988875 67777777643                              


Q ss_pred             eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099         169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK  248 (605)
Q Consensus       169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~  248 (605)
                                                                                                  ....
T Consensus       422 ----------------------------------------------------------------------------~~~~  425 (563)
T 4e3x_A          422 ----------------------------------------------------------------------------NESV  425 (563)
T ss_dssp             ----------------------------------------------------------------------------ECSS
T ss_pred             ----------------------------------------------------------------------------CCCC
Confidence                                                                                        1236


Q ss_pred             CeeeeeeEeeccCcchhhhhhhhcCceEEeEecCC--HHHHHHhh-cCCCcceeEEEecCChHHHHHHHHHhh--cccEE
Q psy1099         249 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERA-NDTKYGLASGIVTTNIDTANTFAHAIN--AGSVW  323 (605)
Q Consensus       249 g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~-n~~~~glaa~vft~d~~~~~~~~~~~~--~g~v~  323 (605)
                      |+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++++++++++  +|+|+
T Consensus       426 G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~  505 (563)
T 4e3x_A          426 GYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFY  505 (563)
T ss_dssp             SCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEE
T ss_pred             CcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEE
Confidence            89999999999999999999999999999999997  79999999 799999999999999999999999976  99999


Q ss_pred             EeccC--CcCCCCCccccccCCCc-hHHhHHhhhcccceeEEEec
Q psy1099         324 INCYQ--AVVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       324 iN~~~--~~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||...  ...+.+||||+|.||+| +++|..+++.|+..|+++..
T Consensus       506 IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~  550 (563)
T 4e3x_A          506 INDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET  550 (563)
T ss_dssp             ESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE
T ss_pred             EcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe
Confidence            99643  44678999999999998 88999999999999998775

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.1e-33  Score=305.96  Aligned_cols=254  Identities=34%  Similarity=0.555  Sum_probs=226.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+|+.+.+..++                      
T Consensus       158 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~  237 (486)
T 1t90_A          158 PCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYK  237 (486)
T ss_dssp             HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998532211100                      


Q ss_pred             ------------------------------------------hhhcCCcccccce-eEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSR-TYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~-~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                .|.|.++    +| ++||++ ||+|+++++++++++++
T Consensus       238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvv~v~~~-~d~f~~~l~~~~~~~~v  312 (486)
T 1t90_A          238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMAC----AVVTVEEGI-ADEFMAKLQEKVADIKI  312 (486)
T ss_dssp             HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHH-HHHHHHHHHHHHTTCCB
T ss_pred             HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccC----CeeEEecCC-HHHHHHHHHHHHHhccc
Confidence                                                      1356666    89 999999 99999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|+++++++||+++..+++++.++++.+.++|+++.+||...                                     
T Consensus       313 G~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~-------------------------------------  355 (486)
T 1t90_A          313 GNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN-------------------------------------  355 (486)
T ss_dssp             SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSS-------------------------------------
T ss_pred             CCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC-------------------------------------
Confidence            9999999999999999999999999998888888887777521                                     


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                          ....|+|++|||
T Consensus       356 --------------------------------------------------------------------~~~~g~~~~Ptv  367 (486)
T 1t90_A          356 --------------------------------------------------------------------VSDDGYFVGPTI  367 (486)
T ss_dssp             --------------------------------------------------------------------CCSSSSCCCCEE
T ss_pred             --------------------------------------------------------------------CCCCCCEECCEE
Confidence                                                                                012478999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCC
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAP  335 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~p  335 (605)
                      +.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+|
T Consensus       368 l~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~P  447 (486)
T 1t90_A          368 FDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFP  447 (486)
T ss_dssp             EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSC
T ss_pred             EeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997533 357899


Q ss_pred             ccccccCCCc--hHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIG--RELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G--~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+|  +++|.+++++|++.|+++..
T Consensus       448 fGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~  479 (486)
T 1t90_A          448 FSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR  479 (486)
T ss_dssp             CCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred             cCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence            9999999999  89999999999999998764

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=1.4e-33  Score=307.13  Aligned_cols=251  Identities=35%  Similarity=0.592  Sum_probs=222.4

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCCh-------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA-------------------------   56 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~-------------------------   56 (605)
                      ++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+|++.+..                         
T Consensus       190 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~  269 (516)
T 1uzb_A          190 FTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY  269 (516)
T ss_dssp             HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998653210                         


Q ss_pred             --hh--------hh------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          57 --PY--------WR------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        57 --~~--------~~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                        ..        +.                                    |.|.++    +|++||+++||+|++++.++
T Consensus       270 ~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~  345 (516)
T 1uzb_A          270 EAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA----SRLILTQGAYEPVLERVLKR  345 (516)
T ss_dssp             HHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEHHHHHHHHHHHHHH
T ss_pred             HHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccC----cEEEEchHHHHHHHHHHHHH
Confidence              00        10                                    345555    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ  170 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~  170 (605)
                      ++++++|+| ++++++||+++..+++++.++|+.+.++| ++.+||..                                
T Consensus       346 ~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~--------------------------------  391 (516)
T 1uzb_A          346 AERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKR--------------------------------  391 (516)
T ss_dssp             HTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSB--------------------------------
T ss_pred             HHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCcc--------------------------------
Confidence            999999999 99999999999999999998888887776 66666642                                


Q ss_pred             EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099         171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  250 (605)
Q Consensus       171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~  250 (605)
                                                                                                ....|+
T Consensus       392 --------------------------------------------------------------------------~~~~g~  397 (516)
T 1uzb_A          392 --------------------------------------------------------------------------LEGEGY  397 (516)
T ss_dssp             --------------------------------------------------------------------------CSSSSC
T ss_pred             --------------------------------------------------------------------------CCCCCc
Confidence                                                                                      112478


Q ss_pred             eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--C
Q psy1099         251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--Q  328 (605)
Q Consensus       251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~  328 (605)
                      |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..  +
T Consensus       398 ~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~  477 (516)
T 1uzb_A          398 FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITG  477 (516)
T ss_dssp             CBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred             EECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999964  3


Q ss_pred             CcCCCCCccccccCCCc-hHHhHHhhhcccceeEEEe
Q psy1099         329 AVVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTE  364 (605)
Q Consensus       329 ~~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~  364 (605)
                      ...+.+||||+|.||+| +++|..++++|++.|+++.
T Consensus       478 ~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~  514 (516)
T 1uzb_A          478 ALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE  514 (516)
T ss_dssp             CCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred             CCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEe
Confidence            34678999999999999 4788999999999998865

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=3.9e-33  Score=305.06  Aligned_cols=260  Identities=23%  Similarity=0.332  Sum_probs=225.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcC-CCCccEEEecCCCCCChh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPGYGPMSAP-----------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aG-lP~gvv~vv~g~~~~~~~-----------------------   57 (605)
                      ++|++++||++||+||+||||.+|+++.++++++.++| +|+|++|+|+|++.....                       
T Consensus       168 ~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l~~vd~V~FTGS~~~G~~i~~~  247 (534)
T 2y53_A          168 LWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAH  247 (534)
T ss_dssp             HHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGCCTTCEEEEESCHHHHHHHHTS
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcccccCEEEEECCHHHHHHHHHh
Confidence            46899999999999999999999999999999999999 899999999986542100                       


Q ss_pred             -------------------------------hh---------------hhhcCCcccccceeEeccccHHHHHHHHHHHH
Q psy1099          58 -------------------------------YW---------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA   91 (605)
Q Consensus        58 -------------------------------~~---------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~   91 (605)
                                                     .+               .|.|.++    +|++||+++||+|++++++++
T Consensus       248 aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~  323 (534)
T 2y53_A          248 PAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAI----RRAFVPEAALEPVLEALKAKL  323 (534)
T ss_dssp             HHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSE----EEEEEEGGGHHHHHHHHHHHH
T ss_pred             hhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCC----CEEEEeccHHHHHHHHHHHHH
Confidence                                           00               1345555    899999999999999999999


Q ss_pred             hcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeE
Q psy1099          92 AARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT  171 (605)
Q Consensus        92 ~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~  171 (605)
                      +++++|+|+++++++||+++..+++++.++|+.+ ++|+++.+||+...         ..                    
T Consensus       324 ~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~---------~~--------------------  373 (534)
T 2y53_A          324 AKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVP---------LI--------------------  373 (534)
T ss_dssp             TTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSC---------CB--------------------
T ss_pred             HhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccc---------cc--------------------
Confidence            9999999999999999999999999999999988 67888888875310         00                    


Q ss_pred             EEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCee
Q psy1099         172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYF  251 (605)
Q Consensus       172 ~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~  251 (605)
                                                                                           +  .....|+|
T Consensus       374 ---------------------------------------------------------------------~--~~~~~g~~  382 (534)
T 2y53_A          374 ---------------------------------------------------------------------D--ADANIAAC  382 (534)
T ss_dssp             ---------------------------------------------------------------------S--CCTTTSCC
T ss_pred             ---------------------------------------------------------------------c--ccCCCCce
Confidence                                                                                 0  00124789


Q ss_pred             eeeeEeeccCcc--hhhhhhhhcCceEEeEecC---CH-----HHHHHhhcCCCcceeEEEecCChHHHHHHHHHh--hc
Q psy1099         252 IEPTVFSNVTDD--FKIAREEIFGPVQTIIKFK---TL-----DEVIERANDTKYGLASGIVTTNIDTANTFAHAI--NA  319 (605)
Q Consensus       252 ~~Ptvl~~v~~~--~~i~~eE~FgPvl~i~~~~---d~-----~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~--~~  319 (605)
                      ++|||+.+++++  +++++||+||||++|++|+   |+     ||||+++|+++|||++||||+|.++++++++++  ++
T Consensus       383 ~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~a  462 (534)
T 2y53_A          383 VAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSH  462 (534)
T ss_dssp             CCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTE
T ss_pred             ecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhC
Confidence            999999999988  5899999999999999999   99     999999999999999999999999999999999  89


Q ss_pred             ccEEEeccC---------CcCCCCCccccccCCCchH-HhHHhhhcccceeEEEecC
Q psy1099         320 GSVWINCYQ---------AVVPQAPFGGFKESGIGRE-LGKAALDEYTELKTVTESP  366 (605)
Q Consensus       320 g~v~iN~~~---------~~~~~~pfGG~~~SG~G~~-~G~~~~~~~~~~k~~t~s~  366 (605)
                      |+|+||...         ...+.+||||+|.||+|++ +|..++++|++.|++...+
T Consensus       463 G~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p  519 (534)
T 2y53_A          463 GRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS  519 (534)
T ss_dssp             EEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred             CEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence            999999643         2357899999999999999 6899999999999998875

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=99.98  E-value=9.2e-33  Score=296.68  Aligned_cols=244  Identities=22%  Similarity=0.371  Sum_probs=212.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|+.+.+..++                      
T Consensus       147 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~  225 (457)
T 3lns_A          147 TLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQA  225 (457)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHH
Confidence            5789999999999999999999999999999999998 99999999998432211000                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    +|++||+++||+|++++.++++.++   
T Consensus       226 aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~---  298 (457)
T 3lns_A          226 AAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAP----DYLYVHYSVKDALLERLVERVKTEL---  298 (457)
T ss_dssp             HHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSE----EEEEEEGGGHHHHHHHHHHHHHHHC---
T ss_pred             HhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCC----ceEEEcHHHHHHHHHHHHHHHHhcC---
Confidence                                                     1356666    8999999999999999999998887   


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      |.+.  .+||+++..+++++.++|+.+.   +++.+||.                                         
T Consensus       299 p~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg~-----------------------------------------  332 (457)
T 3lns_A          299 PEIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGSQ-----------------------------------------  332 (457)
T ss_dssp             CSTT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECCC-----------------------------------------
T ss_pred             CCcc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCCc-----------------------------------------
Confidence            6665  9999999999888887776531   34444443                                         


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                       .. ..|+|++|||+.
T Consensus       333 -----------------------------------------------------------------~~-~~g~~~~Ptvl~  346 (457)
T 3lns_A          333 -----------------------------------------------------------------AD-VSKRALSATVVD  346 (457)
T ss_dssp             -----------------------------------------------------------------EE-GGGTEECCEEEE
T ss_pred             -----------------------------------------------------------------cC-CCCceeCCEEEe
Confidence                                                                             21 247899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcC-CCcceeEEEecCChHHHHHHHHHhhcccEEEecc--CCcCCCCC
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND-TKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--QAVVPQAP  335 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~-~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~~~~~~~p  335 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.++++++++++++|+|+||..  +...+.+|
T Consensus       347 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~P  426 (457)
T 3lns_A          347 GVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLP  426 (457)
T ss_dssp             SCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSC
T ss_pred             cCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999 9999999999999999999999999999999975  34578999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+|+++|.+++++|++.|+++..
T Consensus       427 fGG~k~SG~G~~~g~~~~~~f~~~k~v~~~  456 (457)
T 3lns_A          427 FGGIGASGMGEYHGHFSYLTFTHKKSVRIV  456 (457)
T ss_dssp             BCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred             cCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence            999999999999999999999999998764

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=99.98  E-value=4.8e-32  Score=311.85  Aligned_cols=254  Identities=29%  Similarity=0.503  Sum_probs=226.5

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------   57 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------   57 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++++||+|+|++|+|+|++.+...                        
T Consensus       683 ~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~  762 (1026)
T 4f9i_A          683 SMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRII  762 (1026)
T ss_dssp             HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999986432100                        


Q ss_pred             -----------hh------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          58 -----------YW------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        58 -----------~~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                                 .+                                    .|.|.++    +|++||+++|++|++++++.
T Consensus       763 ~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~----~rl~V~~~i~d~f~~~L~~~  838 (1026)
T 4f9i_A          763 ERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSAC----SRVIVLDAVYDKFIERLVSM  838 (1026)
T ss_dssp             HHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEGGGHHHHHHHHHHH
T ss_pred             HHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCC----ceEEecHHHHHHHHHHHHHH
Confidence                       00                                    1356666    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ  170 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~  170 (605)
                      ++++++|+|.++++++||+|+..+++++..+|+.+.+.| ++.+||..                                
T Consensus       839 ~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~--------------------------------  885 (1026)
T 4f9i_A          839 AKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPV--------------------------------  885 (1026)
T ss_dssp             HHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCC--------------------------------
T ss_pred             HHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCc--------------------------------
Confidence            999999999999999999999999999999999888877 77666642                                


Q ss_pred             EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099         171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  250 (605)
Q Consensus       171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~  250 (605)
                                                                                                ....|+
T Consensus       886 --------------------------------------------------------------------------~~~~G~  891 (1026)
T 4f9i_A          886 --------------------------------------------------------------------------PAGEGY  891 (1026)
T ss_dssp             --------------------------------------------------------------------------CSSSSC
T ss_pred             --------------------------------------------------------------------------CCCCCc
Confidence                                                                                      112488


Q ss_pred             eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--
Q psy1099         251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--  328 (605)
Q Consensus       251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--  328 (605)
                      |++|||+.++++++++++||+|||||+|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||...  
T Consensus       892 fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~  971 (1026)
T 4f9i_A          892 FVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTG  971 (1026)
T ss_dssp             CCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred             eecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999643  


Q ss_pred             CcCCCCCccccccCCCch-HHhHHhhhcccceeEEEecC
Q psy1099         329 AVVPQAPFGGFKESGIGR-ELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       329 ~~~~~~pfGG~~~SG~G~-~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ...+.+||||+|.||+|+ .+|..+++.|+..|+++...
T Consensus       972 ~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A          972 ALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp             CCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred             CCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence            446889999999999994 68899999999999988763

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=99.97  E-value=1.9e-31  Score=288.60  Aligned_cols=246  Identities=25%  Similarity=0.343  Sum_probs=214.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|+.+.+..+                       
T Consensus       156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~  235 (490)
T 3ju8_A          156 PNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHS  235 (490)
T ss_dssp             HHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999853211100                       


Q ss_pred             -----------h-------------------------------hhhcCCcccccceeEecccc-HHHHHHHHHHHHhcCc
Q psy1099          59 -----------W-------------------------------RKSCLSPLAYRSRTYVQEDI-YDTFVKKAVEKAAARK   95 (605)
Q Consensus        59 -----------~-------------------------------~~~~~~~~~~~~~~~v~~~i-~~~~~~~l~~~~~~~~   95 (605)
                                 +                               .|.|.++    +|++||+++ ||+|+++++++.++++
T Consensus       236 ~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~~i~d~f~~~l~~~~~~~~  311 (490)
T 3ju8_A          236 QFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCA----RRLLVPQGAWGDALLARLVAVSATLR  311 (490)
T ss_dssp             HTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred             HhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----CEEEEECCccHHHHHHHHHHHHHhcc
Confidence                       0                               0345544    899999996 9999999999999999


Q ss_pred             cCC-CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          96 VGD-PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        96 vg~-~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      +|+ |.++++++||+++..+++++.++|+.+.++|+++.+||..                                    
T Consensus       312 ~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~------------------------------------  355 (490)
T 3ju8_A          312 VGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQ------------------------------------  355 (490)
T ss_dssp             BCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCC------------------------------------
T ss_pred             CCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCc------------------------------------
Confidence            999 9999999999999999999999888888888887777643                                    


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                            ....|+|++|
T Consensus       356 ----------------------------------------------------------------------~~~~g~~~~P  365 (490)
T 3ju8_A          356 ----------------------------------------------------------------------PIDGAALLTP  365 (490)
T ss_dssp             ----------------------------------------------------------------------CSTTSCCCCC
T ss_pred             ----------------------------------------------------------------------cCCCCCEEcc
Confidence                                                                                  1235789999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCC
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQ  333 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~  333 (605)
                      ||+. ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.
T Consensus       366 Tvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~  444 (490)
T 3ju8_A          366 GILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASS  444 (490)
T ss_dssp             EEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTT
T ss_pred             EEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCC
Confidence            9999 9999999999999999999999999999999999999999999999999999999999999999997553 4578


Q ss_pred             CCccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099         334 APFGGFKESGIGRELGKAALDEYTELKTVTE  364 (605)
Q Consensus       334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~  364 (605)
                      +||||+|.||++      ++++|++.|+++.
T Consensus       445 ~PfGG~~~SG~~------~~~~~~~~k~v~~  469 (490)
T 3ju8_A          445 APFGGIGASGNH------RPSAYYAADYCAY  469 (490)
T ss_dssp             SEECCCGGGBSS------CCEETTHHHHHEE
T ss_pred             CCcCCccccchh------HHHhhheeEEEEE
Confidence            999999999975      3567777776543

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=99.96  E-value=3.6e-30  Score=295.70  Aligned_cols=250  Identities=29%  Similarity=0.465  Sum_probs=220.2

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      ++|++++||++||+||+||||.||+++..++++++++|+|+|++|+|+|+++.+..+                       
T Consensus       666 ~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~  745 (1001)
T 3haz_A          666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINR  745 (1001)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999864321000                       


Q ss_pred             --------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099          59 --------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR   94 (605)
Q Consensus        59 --------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~   94 (605)
                              +                                    .|.|.++    ++++||+++||+|++++++.++++
T Consensus       746 ~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~----~rllV~e~i~d~f~~~L~~~~~~l  821 (1001)
T 3haz_A          746 ALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSAL----RLLFVQEDVADRMIEMVAGAAREL  821 (1001)
T ss_dssp             HHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEHHHHHHHHHHHHHHHHTC
T ss_pred             HHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCC----ceeeccHHHHHHHHHHHHHHHHhc
Confidence                    0                                    1356665    899999999999999999999999


Q ss_pred             ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099          95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK  174 (605)
Q Consensus        95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~  174 (605)
                      ++|+|.++++++||+|+..+.+++..+|+.+.+.| ++ +||..+                                   
T Consensus       822 ~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-----------------------------------  864 (1001)
T 3haz_A          822 KIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-----------------------------------  864 (1001)
T ss_dssp             CBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-----------------------------------
T ss_pred             CCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-----------------------------------
Confidence            99999999999999999999999999998888777 66 665421                                   


Q ss_pred             cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099         175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP  254 (605)
Q Consensus       175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  254 (605)
                                                                                              ..|+|++|
T Consensus       865 ------------------------------------------------------------------------~~G~fv~P  872 (1001)
T 3haz_A          865 ------------------------------------------------------------------------PEGCFVAP  872 (1001)
T ss_dssp             ------------------------------------------------------------------------CSSSCCCC
T ss_pred             ------------------------------------------------------------------------CCCcEEee
Confidence                                                                                    14788999


Q ss_pred             eEeeccCcchhhhhhhhcCceEEeEecCC--HHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--Cc
Q psy1099         255 TVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AV  330 (605)
Q Consensus       255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~  330 (605)
                      ||+.+  +++.+++||+|||||+|++|+|  +||||+++|+++|||++||||+|.++++++++++++|+|+||...  ..
T Consensus       873 Tvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~  950 (1001)
T 3haz_A          873 HIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAV  950 (1001)
T ss_dssp             EEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCC
T ss_pred             EEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCC
Confidence            99974  6788999999999999999996  799999999999999999999999999999999999999999754  34


Q ss_pred             CCCCCccccccCCCc-hHHhHHhhhcccceeEEEecC
Q psy1099         331 VPQAPFGGFKESGIG-RELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       331 ~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      .+.+||||+|.||+| +.+|..+++.|+..|+++...
T Consensus       951 ~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~  987 (1001)
T 3haz_A          951 VGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT  987 (1001)
T ss_dssp             TTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred             CCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence            567899999999999 568899999999999988763

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.4e-28  Score=268.52  Aligned_cols=242  Identities=23%  Similarity=0.282  Sum_probs=200.7

Q ss_pred             ccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCCChh---------------------
Q psy1099           3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPMSAP---------------------   57 (605)
Q Consensus         3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~---------------------   57 (605)
                      +|++++||++||+||+|||+.+|+|+.++++++.    ++|+|+|++|+|+|++.+...                     
T Consensus       189 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~  268 (528)
T 3v4c_A          189 GGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGR  268 (528)
T ss_dssp             SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred             hhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHH
Confidence            4899999999999999999999999999998764    679999999999986532100                     


Q ss_pred             --------hh-----------------------------------------hhhcCCcccccceeEeccc-cHHHHHHHH
Q psy1099          58 --------YW-----------------------------------------RKSCLSPLAYRSRTYVQED-IYDTFVKKA   87 (605)
Q Consensus        58 --------~~-----------------------------------------~~~~~~~~~~~~~~~v~~~-i~~~~~~~l   87 (605)
                              .+                                         .|.|.++    +|++||++ +||+|++++
T Consensus       269 ~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~~i~d~f~~~l  344 (528)
T 3v4c_A          269 ALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNP----GIAVVIEGADADRFTTAA  344 (528)
T ss_dssp             HHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCC----CEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccC----cEEEEecccHHHHHHHHH
Confidence                    00                                         0345555    89999997 999999999


Q ss_pred             HHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccc
Q psy1099          88 VEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFG  167 (605)
Q Consensus        88 ~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifg  167 (605)
                      +++++++++|      +.+||+++....++                                                  
T Consensus       345 ~~~~~~~~~~------~~~gp~~~~~~~~~--------------------------------------------------  368 (528)
T 3v4c_A          345 VEALAKVAPQ------TMLTDGIAKAYRDG--------------------------------------------------  368 (528)
T ss_dssp             HHHHHTCCCE------ECSCHHHHHHHHHH--------------------------------------------------
T ss_pred             HHHHHhcccC------CCCCHHHHHHHHHH--------------------------------------------------
Confidence            9999888754      45566554333222                                                  


Q ss_pred             ceeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCC
Q psy1099         168 PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD  247 (605)
Q Consensus       168 p~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~  247 (605)
                                                                              +..+++   ++|+++++||..   
T Consensus       369 --------------------------------------------------------v~~~~~---~~Ga~v~~gG~~---  386 (528)
T 3v4c_A          369 --------------------------------------------------------QARFAT---RNAVKPLLATES---  386 (528)
T ss_dssp             --------------------------------------------------------HHHHHT---CTTCEEEECCCC---
T ss_pred             --------------------------------------------------------HHHHHH---hCCCEEEeCCCc---
Confidence                                                                    222222   357788888764   


Q ss_pred             CCeeeeeeEeeccCcc---hhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecC--ChHHHHHHHHHhh--cc
Q psy1099         248 KGYFIEPTVFSNVTDD---FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT--NIDTANTFAHAIN--AG  320 (605)
Q Consensus       248 ~g~~~~Ptvl~~v~~~---~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~--d~~~~~~~~~~~~--~g  320 (605)
                      .|+|++|||+.+++++   |++++||+||||++|++|+|+||||+++|+++|||++||||+  |.+++++++++++  +|
T Consensus       387 ~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG  466 (528)
T 3v4c_A          387 SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAG  466 (528)
T ss_dssp             CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEE
T ss_pred             CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCc
Confidence            6899999999988888   899999999999999999999999999999999999999999  8999999999998  99


Q ss_pred             cEEEeccCC---cCCCCCccc-cccCCCchHH--hHHhhhcccceeEEEecC
Q psy1099         321 SVWINCYQA---VVPQAPFGG-FKESGIGREL--GKAALDEYTELKTVTESP  366 (605)
Q Consensus       321 ~v~iN~~~~---~~~~~pfGG-~~~SG~G~~~--G~~~~~~~~~~k~~t~s~  366 (605)
                      +|+||....   ..+.+|||| +|.||+|+++  |.++++.|++.|++..-|
T Consensus       467 ~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q~~p  518 (528)
T 3v4c_A          467 RVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQNMP  518 (528)
T ss_dssp             EEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEESCC
T ss_pred             EEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhhcCC
Confidence            999997533   358899999 9999999875  999999999999876654

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=99.95  E-value=1.9e-27  Score=258.53  Aligned_cols=240  Identities=18%  Similarity=0.258  Sum_probs=197.9

Q ss_pred             ccchhHHHhhcCcEEEccCCCCchhHHHHHHHH----HHcCCCCccEEEecCCCCCChh---------------------
Q psy1099           3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALT----QQAGFPDGVISVLPGYGPMSAP---------------------   57 (605)
Q Consensus         3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~~~---------------------   57 (605)
                      +|++++||++||+||+||||.+|+++.++++++    .++|+|+|++|+|+|.+.+...                     
T Consensus       156 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~  235 (510)
T 1ez0_A          156 GGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGR  235 (510)
T ss_dssp             SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHH
Confidence            489999999999999999999999999999998    5579999999999986442110                     


Q ss_pred             --------h-----------------------hh-----------------hhcCCcccccceeEeccc-cHHHHHHHHH
Q psy1099          58 --------Y-----------------------WR-----------------KSCLSPLAYRSRTYVQED-IYDTFVKKAV   88 (605)
Q Consensus        58 --------~-----------------------~~-----------------~~~~~~~~~~~~~~v~~~-i~~~~~~~l~   88 (605)
                              .                       +.                 |.|.++    +|++||++ +||+|++++.
T Consensus       236 ~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~~i~d~f~~~l~  311 (510)
T 1ez0_A          236 ALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKP----GVVFALNTPETQAFIETAQ  311 (510)
T ss_dssp             HHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCC----CEEEEESSHHHHHHHHHHH
T ss_pred             HHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCC----CEEEEeCCccHHHHHHHHH
Confidence                    0                       00                 234444    89999999 9999999999


Q ss_pred             HHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099          89 EKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP  168 (605)
Q Consensus        89 ~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp  168 (605)
                      +.++++++          ||++++.+.+++.++|+.+++                                         
T Consensus       312 ~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~-----------------------------------------  340 (510)
T 1ez0_A          312 SLIRQQSP----------STLLTPGIRDSYQSQVVSRGS-----------------------------------------  340 (510)
T ss_dssp             HHHHHCCC----------BCCSSHHHHHHHHHHHHHHHT-----------------------------------------
T ss_pred             HHHHhcCC----------CCCCCHHHHHHHHHHHHHHHh-----------------------------------------
Confidence            99988875          477776665555444443331                                         


Q ss_pred             eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099         169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK  248 (605)
Q Consensus       169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~  248 (605)
                                                                                      ++|+++++||.    .
T Consensus       341 ----------------------------------------------------------------~~Ga~~~~gg~----~  352 (510)
T 1ez0_A          341 ----------------------------------------------------------------DDGIDVTFSQA----E  352 (510)
T ss_dssp             ----------------------------------------------------------------STTEEEEECCC----C
T ss_pred             ----------------------------------------------------------------cCCCEEEecCC----C
Confidence                                                                            24666777764    2


Q ss_pred             CeeeeeeEeeccCcc---hhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCCh--HHHHHHHHHh--hccc
Q psy1099         249 GYFIEPTVFSNVTDD---FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI--DTANTFAHAI--NAGS  321 (605)
Q Consensus       249 g~~~~Ptvl~~v~~~---~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~--~~~~~~~~~~--~~g~  321 (605)
                      |+|++|||+.+++++   |++++||+||||++|++|+|+||||+++|+++|||++||||+|.  ++++++++++  ++|+
T Consensus       353 g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~  432 (510)
T 1ez0_A          353 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGR  432 (510)
T ss_dssp             TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEE
T ss_pred             CCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccE
Confidence            788899999888877   99999999999999999999999999999999999999999997  7899999999  7999


Q ss_pred             EEEeccCC---cCCCCCccc-cccCCCch--HHhHHhhhcccceeEEEec
Q psy1099         322 VWINCYQA---VVPQAPFGG-FKESGIGR--ELGKAALDEYTELKTVTES  365 (605)
Q Consensus       322 v~iN~~~~---~~~~~pfGG-~~~SG~G~--~~G~~~~~~~~~~k~~t~s  365 (605)
                      |+||....   ..+.+|||| ++.||+|+  .+|.++++.|++.|++...
T Consensus       433 V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~~~  482 (510)
T 1ez0_A          433 LVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQAL  482 (510)
T ss_dssp             EEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEESC
T ss_pred             EEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEcCC
Confidence            99997543   357899999 79999875  3799999999998877654

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=99.91  E-value=1.3e-25  Score=241.04  Aligned_cols=221  Identities=15%  Similarity=0.152  Sum_probs=154.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----H----cCCCCccEEEecCCCCCChhhhh-------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----Q----AGFPDGVISVLPGYGPMSAPYWR-------------   60 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~----aGlP~gvv~vv~g~~~~~~~~~~-------------   60 (605)
                      ++|++++||++||+||+||||.+|+++.+++++++    +    +|+|+|++|+|+ ++++....+.             
T Consensus       141 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS  219 (468)
T 1vlu_A          141 IANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGS  219 (468)
T ss_dssp             HHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESC
T ss_pred             HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECC
Confidence            57899999999999999999999999999999995    8    999999999999 6643322110             


Q ss_pred             --------h----------------------------------------hcCCcccccceeEeccccHHHHHHHHHHHHh
Q psy1099          61 --------K----------------------------------------SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAA   92 (605)
Q Consensus        61 --------~----------------------------------------~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~   92 (605)
                              +                                        .|.++    +|++||+++ |+|++++.+.++
T Consensus       220 ~~~g~~i~~~a~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G~C~a~----~rvlV~~~i-d~f~~~l~~~~~  294 (468)
T 1vlu_A          220 NALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAM----ETLLINPKF-SKWWEVLENLTL  294 (468)
T ss_dssp             HHHHHHHHHTCCSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC----CCCC----EEEEECTTS-TTHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCCcCCcC----cEEEEECCH-HHHHHHHHHHHH
Confidence                    0                                        13333    899999999 999999999888


Q ss_pred             cCcc---CCCCCCCCCccccCCHHHHHHHHHH-HHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099          93 ARKV---GDPFDKSVQQGPQVDAVMFTKVLNY-IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP  168 (605)
Q Consensus        93 ~~~v---g~~~~~~~~~gp~i~~~~~~~~~~~-i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp  168 (605)
                      ++++   |+|.+                 .++ |++                                            
T Consensus       295 ~~~v~~~Gdp~~-----------------~~~~i~~--------------------------------------------  313 (468)
T 1vlu_A          295 EGGVTIHATKDL-----------------KTAYFDK--------------------------------------------  313 (468)
T ss_dssp             HHCCCBEECHHH-----------------HHHHHHH--------------------------------------------
T ss_pred             hcCCeecCCHHH-----------------hcccccc--------------------------------------------
Confidence            7776   54311                 111 111                                            


Q ss_pred             eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099         169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK  248 (605)
Q Consensus       169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~  248 (605)
                                                                                    +.    ++++||.     
T Consensus       314 --------------------------------------------------------------a~----~~~~gG~-----  322 (468)
T 1vlu_A          314 --------------------------------------------------------------LN----ELGKLTE-----  322 (468)
T ss_dssp             --------------------------------------------------------------HH----HHTCCCH-----
T ss_pred             --------------------------------------------------------------cc----eeeccCC-----
Confidence                                                                          11    2334443     


Q ss_pred             CeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC
Q psy1099         249 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ  328 (605)
Q Consensus       249 g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~  328 (605)
                      |  +.||++  +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||...
T Consensus       323 g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~  398 (468)
T 1vlu_A          323 A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAST  398 (468)
T ss_dssp             H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCG
T ss_pred             C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCC
Confidence            3  688887  788999999999999999999999999999999999999999999999999999999999999999866


Q ss_pred             CcCCCCCcc-----ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         329 AVVPQAPFG-----GFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       329 ~~~~~~pfG-----G~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ...+..|||     |+|.||+|++ |..++++|++.|+++..
T Consensus       399 ~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~  439 (468)
T 1vlu_A          399 RFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRG  439 (468)
T ss_dssp             GGCC-----------------------CCSGGGEEEEEEEEC
T ss_pred             CCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEEC
Confidence            667788999     9999999999 99999999999998765

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=99.91  E-value=1.1e-25  Score=241.96  Aligned_cols=238  Identities=14%  Similarity=0.182  Sum_probs=195.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHH----HHHHcCCCCccEEEecCCCCCCh-hhh-----------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAA----LTQQAGFPDGVISVLPGYGPMSA-PYW-----------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~----ll~~aGlP~gvv~vv~g~~~~~~-~~~-----------------   59 (605)
                      ++|++++||++||+||+||||.+|+|+.++++    ++.++|+|+|++|+|+|++.+.. .++                 
T Consensus       125 ~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~  204 (464)
T 3k9d_A          125 VIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMV  204 (464)
T ss_dssp             HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHHH
T ss_pred             HHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHHH
Confidence            46899999999999999999999999998655    56888999999999998643211 000                 


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHH-----
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA-----   91 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~-----   91 (605)
                                                                 .|.|.++    +|++||+++||+|++++.++.     
T Consensus       205 ~~a~~~~kpvlelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~  280 (464)
T 3k9d_A          205 KAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASE----QSVVVERVNKEAVIAEFRKQGAHFLS  280 (464)
T ss_dssp             HHHTTSSSCEEEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSC----CEEEEEHHHHHHHHHHHHHTTEEECC
T ss_pred             HHHHhcCCcEEeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCC----cEEEEeHHHHHHHHHHHHHhhhhhcC
Confidence                                                       1346665    899999999999999999875     


Q ss_pred             --hcCccCCCC-CCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099          92 --AARKVGDPF-DKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP  168 (605)
Q Consensus        92 --~~~~vg~~~-~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp  168 (605)
                        ..+++|+|. ++++.+||+++..+++                                                    
T Consensus       281 ~~~~~~~g~~~~~~~~~~gp~i~~~~~~----------------------------------------------------  308 (464)
T 3k9d_A          281 DAEAVQLGKFILRPNGSMNPAIVGKSVQ----------------------------------------------------  308 (464)
T ss_dssp             HHHHHHHHHHHBCTTSCBCGGGTTCCHH----------------------------------------------------
T ss_pred             hhhhhhhcccccCCCCccCcccCHHHHH----------------------------------------------------
Confidence              456777776 6677788777555444                                                    


Q ss_pred             eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099         169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK  248 (605)
Q Consensus       169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~  248 (605)
                                                                            ++.+++++++++|+++++||..    
T Consensus       309 ------------------------------------------------------~i~~~~~~a~~~ga~vl~gg~~----  330 (464)
T 3k9d_A          309 ------------------------------------------------------HIANLAGLTVPADARVLIAEET----  330 (464)
T ss_dssp             ------------------------------------------------------HHHHHTTCCCCTTCCEEEEECC----
T ss_pred             ------------------------------------------------------HHHHHhhhhhcCCCEEEEcCCC----
Confidence                                                                  4445556666778888888742    


Q ss_pred             CeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHH----HhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEE
Q psy1099         249 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVI----ERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWI  324 (605)
Q Consensus       249 g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai----~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~i  324 (605)
                                ++++++++. ||+|||||+|++|+|+||||    +++|+++|||++||||+|.+++++|++++++|+|+|
T Consensus       331 ----------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~v  399 (464)
T 3k9d_A          331 ----------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLV  399 (464)
T ss_dssp             ----------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEE
T ss_pred             ----------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEE
Confidence                      466778765 89999999999999999997    799999999999999999999999999999999999


Q ss_pred             eccCC---------cCCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         325 NCYQA---------VVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       325 N~~~~---------~~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |.+..         ..+.+|||| +.+|.|.++|+.+++.|++.|++...
T Consensus       400 N~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~  448 (464)
T 3k9d_A          400 NTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG  448 (464)
T ss_dssp             SSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred             ECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence            97543         468899998 77899999999999999999988765

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=99.90  E-value=4.9e-25  Score=236.16  Aligned_cols=261  Identities=19%  Similarity=0.132  Sum_probs=191.6

Q ss_pred             cchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHc----CCCCccEEEecCCCCCChhhhhhhcCCcccccceeEecccc
Q psy1099           4 WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDI   79 (605)
Q Consensus         4 ~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~a----GlP~gvv~vv~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~i   79 (605)
                      +++++||++||+||+||||.+|+++.+|+++++++    | |+|++|+|+|+.+.+..++.++.++.+.|++        
T Consensus       157 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTG--------  227 (463)
T 2h5g_A          157 QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRG--------  227 (463)
T ss_dssp             HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEES--------
T ss_pred             HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEEC--------
Confidence            68999999999999999999999999999999999    9 9999999999433444455565566666666        


Q ss_pred             HHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchh
Q psy1099          80 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK  159 (605)
Q Consensus        80 ~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~  159 (605)
                       +.-+.+.+.+.+.++                                 -..+++||++         |+||+++.+...
T Consensus       228 -S~~~G~~i~~~aal~---------------------------------pv~lElGGk~---------p~iV~~dADl~~  264 (463)
T 2h5g_A          228 -SSQLVRDIQKAAKGI---------------------------------PVMGHSEGIC---------HMYVDSEASVDK  264 (463)
T ss_dssp             -CHHHHHHHHHHCSSS---------------------------------CBCSCSCCCE---------EEEECTTCCTTT
T ss_pred             -CHHHHHHHHHhcCCC---------------------------------CEEEecCCcc---------eEEEcCCCCHHH
Confidence             345555555544311                                 1157889997         888887554333


Q ss_pred             hhcccccc---ceeEE-------EecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhh
Q psy1099         160 IAREEIFG---PVQTI-------IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIK  229 (605)
Q Consensus       160 ~~~~~ifg---p~~~~-------v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~  229 (605)
                      ++...+++   .+|.|       ++++..|           +                           .++++   +++
T Consensus       265 Aa~~i~~~~f~nGQ~C~a~~rvlV~~~i~d-----------~---------------------------p~~~~---~i~  303 (463)
T 2h5g_A          265 VTRLVRDSKCEYPAACNALETLLIHRDLLR-----------T---------------------------PLFDQ---IID  303 (463)
T ss_dssp             HHHHHHHHHHSCTTSTTSEEEEEEEGGGTT-----------S---------------------------HHHHH---HHH
T ss_pred             HHHHHHHHhccCCCccccCcEEEEeccccc-----------h---------------------------HHHHH---HHH
Confidence            44444432   13433       3333332           0                           01223   366


Q ss_pred             hccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHH
Q psy1099         230 SGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDT  309 (605)
Q Consensus       230 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~  309 (605)
                      +++++|++++.|+.. ...++|+        +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus       304 ~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~  374 (463)
T 2h5g_A          304 MLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENT  374 (463)
T ss_dssp             HHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHH
T ss_pred             HHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHH
Confidence            677789999855432 2234442        6789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccEEEeccCCcCCCCCccccccCCCc--hH--HhHHhhhcccceeEEEecC
Q psy1099         310 ANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIG--RE--LGKAALDEYTELKTVTESP  366 (605)
Q Consensus       310 ~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~G--~~--~G~~~~~~~~~~k~~t~s~  366 (605)
                      ++++++++++|+|+||......+.+||||+|+||+|  ++  +|.+++++|++.|+++...
T Consensus       375 a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~  435 (463)
T 2h5g_A          375 AEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK  435 (463)
T ss_dssp             HHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred             HHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence            999999999999999976666788999999999999  65  8999999999999987764

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=99.89  E-value=6.5e-24  Score=226.88  Aligned_cols=215  Identities=21%  Similarity=0.209  Sum_probs=173.1

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHH----HHcCCCCccEEEecCCCC-CChhhh-----------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALT----QQAGFPDGVISVLPGYGP-MSAPYW-----------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll----~~aGlP~gvv~vv~g~~~-~~~~~~-----------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.++++++    .++|+|+|++|+|+|++. .+...+                 
T Consensus       152 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~v  231 (444)
T 4ghk_A          152 TIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSL  231 (444)
T ss_dssp             HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHH
Confidence            5689999999999999999999999999999997    789999999999998543 222111                 


Q ss_pred             ----hh----------------------------------------hcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 ----RK----------------------------------------SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 ----~~----------------------------------------~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                          .+                                        .|.++    +|++||+++||+|++++++++++++
T Consensus       232 g~~v~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~  307 (444)
T 4ghk_A          232 IERLINEARVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYGTCNTM----ETLLVARGIAPAVLSPLGRLYREKG  307 (444)
T ss_dssp             HHHHHHHCCSCBCCCCCCCCEEEECTTCCHHHHHHHCC---------CCCC----CEEEEEGGGHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhCCCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCcccCcC----ceEEEeHHHHHHHHHHHHHHHHHcC
Confidence                01                                        12232    7899999999999999998887776


Q ss_pred             c---CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEE
Q psy1099          96 V---GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI  172 (605)
Q Consensus        96 v---g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~  172 (605)
                      +   |+|.                                                                        
T Consensus       308 ~~~~g~p~------------------------------------------------------------------------  315 (444)
T 4ghk_A          308 VELRVDAD------------------------------------------------------------------------  315 (444)
T ss_dssp             CEEEECHH------------------------------------------------------------------------
T ss_pred             CeecCCHH------------------------------------------------------------------------
Confidence            6   3220                                                                        


Q ss_pred             EecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeee
Q psy1099         173 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI  252 (605)
Q Consensus       173 v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~  252 (605)
                                                                         ...+++++.               .|   
T Consensus       316 ---------------------------------------------------~~~~i~~a~---------------~G---  326 (444)
T 4ghk_A          316 ---------------------------------------------------ARAVLEAAG---------------VG---  326 (444)
T ss_dssp             ---------------------------------------------------HHHHHHHTT---------------CC---
T ss_pred             ---------------------------------------------------HHHHHHhcc---------------cC---
Confidence                                                               011122221               01   


Q ss_pred             eeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCC
Q psy1099         253 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP  332 (605)
Q Consensus       253 ~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~  332 (605)
                         ++  +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+
T Consensus       327 ---~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~  401 (444)
T 4ghk_A          327 ---PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFAD  401 (444)
T ss_dssp             ---CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCS
T ss_pred             ---cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCC
Confidence               11  3567899999999999999999999999999999999999999999999999999999999999998766678


Q ss_pred             CCCccccccCCCc----hHHhHHhhhcccceeEEEecC
Q psy1099         333 QAPFGGFKESGIG----RELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       333 ~~pfGG~~~SG~G----~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ..||||.+.||+|    +++|.+++++|++.|+++...
T Consensus       402 ~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~  439 (444)
T 4ghk_A          402 GFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH  439 (444)
T ss_dssp             TTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred             CCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence            8999999999998    678999999999999887653

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=99.89  E-value=3.7e-24  Score=227.59  Aligned_cols=110  Identities=28%  Similarity=0.329  Sum_probs=100.8

Q ss_pred             eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCC
Q psy1099         254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ  333 (605)
Q Consensus       254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~  333 (605)
                      |||   +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.
T Consensus       309 Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~  385 (427)
T 1o20_A          309 PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDG  385 (427)
T ss_dssp             TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCST
T ss_pred             Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCC
Confidence            775   34578999999999999999999999999999999999999999999999999999999999999976656778


Q ss_pred             CCccccccCCCc----hHHhHHhhhcccceeEEEecC
Q psy1099         334 APFGGFKESGIG----RELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       334 ~pfGG~~~SG~G----~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      .||||.+.||+|    +++|.+++++|++.|+++...
T Consensus       386 ~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~  422 (427)
T 1o20_A          386 GQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE  422 (427)
T ss_dssp             TTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred             CCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence            999999999998    467999999999999987764

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=99.85  E-value=1.1e-22  Score=217.98  Aligned_cols=276  Identities=17%  Similarity=0.203  Sum_probs=189.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCCChhhhhhhcCCcccccceeEecc
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQE   77 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~~~~~~~~~~~~~~~~~~v~~   77 (605)
                      ++|++++||++||+||+||||.+|+|+..+++++.    ++|+|+|++|+|+|++.+                       
T Consensus       120 ~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~-----------------------  176 (452)
T 3my7_A          120 AIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE-----------------------  176 (452)
T ss_dssp             HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHH-----------------------
T ss_pred             HHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHH-----------------------
Confidence            46899999999999999999999999999888876    689999999999985422                       


Q ss_pred             ccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcE--EEeCCcccCCCCccccceEeccCC
Q psy1099          78 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK--LEAGGKRKGDKGYFIEPTVFSNVT  155 (605)
Q Consensus        78 ~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~--~~~gG~~~~~~~~~v~P~vv~~~~  155 (605)
                           ..+.|+....       .+.-.+.|-          ....+.+.+.+.+  .++||++         |+||+.+.
T Consensus       177 -----~~~~L~~~p~-------v~~V~fTGs----------~~~~~~a~~~~kp~~~e~gG~~---------p~iV~~dA  225 (452)
T 3my7_A          177 -----LSNALMKHDD-------IALILATGG----------PGMVKAAYSSGKPAIGVGAGNV---------PVVIDETA  225 (452)
T ss_dssp             -----HHHHHHHCTT-------CCEEEECSC----------HHHHHHHHTSSSCEEECC--CE---------EEEECTTS
T ss_pred             -----HHHHHHhCCC-------ccEEEEECc----------HHHHHHHHhcCCCEEecCCCCC---------eEEEeCCC
Confidence                 2233322211       111122231          1123445555544  4557776         88888765


Q ss_pred             Cchhhhccccc----ccee-------EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHH
Q psy1099         156 DDFKIAREEIF----GPVQ-------TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKV  224 (605)
Q Consensus       156 ~~~~~~~~~if----gp~~-------~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~  224 (605)
                      +..+++...++    ..+|       .+++++.+|++++.+.+..                       ...++..+.+|+
T Consensus       226 Dl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~-----------------------gpli~~~~~~~v  282 (452)
T 3my7_A          226 DIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHK-----------------------AHVLSKTDADKV  282 (452)
T ss_dssp             CHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTTT-----------------------EEECCHHHHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHhC-----------------------CCcCCHHHHHHH
Confidence            44444444443    3343       4567788999999887641                       225678889999


Q ss_pred             HHhhhhccccCCeeeeCCCcc---CCCCeeeeeeE-------eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCC
Q psy1099         225 LNYIKSGVEQGGKLEAGGKRK---GDKGYFIEPTV-------FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT  294 (605)
Q Consensus       225 ~~~i~~a~~~ga~~~~gg~~~---~~~g~~~~Ptv-------l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~  294 (605)
                      .++++++...|++++ |+...   ...|+|++||+       +.++++++++++ |+|||||+|++|+|+||||+++|++
T Consensus       283 ~~~i~~~~~~~a~v~-G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~  360 (452)
T 3my7_A          283 RKVLLIDGALNAKIV-GQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTM  360 (452)
T ss_dssp             HHHHEETTEECGGGT-TCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHH
T ss_pred             HHHHHhhcccCCeEe-cCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhc
Confidence            999998777788874 66532   13589999997       778999999886 8999999999999999999999998


Q ss_pred             C----cceeEEEecCChHHHHH---HHHHhhcccEEEeccCCcCCCCCccccccC-----------CCchHHhHHhhhcc
Q psy1099         295 K----YGLASGIVTTNIDTANT---FAHAINAGSVWINCYQAVVPQAPFGGFKES-----------GIGRELGKAALDEY  356 (605)
Q Consensus       295 ~----~glaa~vft~d~~~~~~---~~~~~~~g~v~iN~~~~~~~~~pfGG~~~S-----------G~G~~~G~~~~~~~  356 (605)
                      .    |||+++|||+|.+++++   |++++++|+|+||.+.      +|||.+..           |+|.++|....++.
T Consensus       361 ~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~------~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv  434 (452)
T 3my7_A          361 VEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPT------THGGIGDLYNFNVAPSLTLGCGSWGGNSISENV  434 (452)
T ss_dssp             HHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCC------C----------------------------CCCC
T ss_pred             ccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCC------CCcccccccccCcCceEeeeccccCCCccCCCC
Confidence            5    99999999999888877   9999999999999753      57665532           67778777665544


Q ss_pred             cceeEE
Q psy1099         357 TELKTV  362 (605)
Q Consensus       357 ~~~k~~  362 (605)
                      ...+.+
T Consensus       435 ~~~~l~  440 (452)
T 3my7_A          435 GPKHLI  440 (452)
T ss_dssp             CGGGGE
T ss_pred             ChhHee
Confidence            443333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	605
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-80
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-78
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	8e-79
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-75
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-72
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-67
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	2e-63
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	1e-55
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	7e-59
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	5e-57
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	3e-58
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	1e-41
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	3e-29
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-53
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-43
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	8e-21
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-47
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	6e-47
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	2e-26
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	4e-23
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	3e-13
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	7e-24
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-19
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	5e-12
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	6e-10
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	6e-08
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	3e-07

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  259 bits (664), Expect = 2e-80
 Identities = 133/273 (48%), Positives = 172/273 (63%), Gaps = 21/273 (7%)

Query: 343 GIGRELGKA-ALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA 401
           G G   G A A  E  +    T S   +     I  AA +SNLKRV+LELGGKSP +I +
Sbjct: 217 GFGPTAGAAIASHEDVDKVAFTGS---TEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS 273

Query: 402 DADVDMAYYY----------CFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSV 451
           DAD+D A                CAGSRT+VQEDIYD FV+++V +A +R VG+PFD   
Sbjct: 274 DADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 333

Query: 452 QQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 511
           +QGPQVD   F K+L YI +G ++G KL  GG    D+GYFI+PTVF +V D   IA+EE
Sbjct: 334 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEE 393

Query: 512 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG-------SAV 564
           IFGPV  I+KFKT++EV+ RAN++ YGLA+ + T ++D AN  + A+ AG          
Sbjct: 394 IFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF 453

Query: 565 VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
             Q+PFGG+K SG GRELG+  L  YTE+KTVT
Sbjct: 454 GAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 486

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  255 bits (652), Expect = 1e-78
 Identities = 134/371 (36%), Positives = 180/371 (48%), Gaps = 60/371 (16%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M AWK GPALA G  V++K AEQTPLTALYVA L ++AGFP GV++++PG+GP       
Sbjct: 168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP------- 220

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---K 117
                                               G            VD V FT   +
Sbjct: 221 ----------------------------------TAGAAIASH----EDVDKVAFTGSTE 242

Query: 118 VLNYI-KSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 173
           +   I  +      K   LE GGK        +         +    A     G      
Sbjct: 243 IGRVIQVAAGSSNLKRVTLELGGK---SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG 299

Query: 174 K-FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGV 232
                 +++ +   +     A   V  N   + T         VD   F K+L YI +G 
Sbjct: 300 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQ----VDETQFKKILGYINTGK 355

Query: 233 EQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 292
           ++G KL  GG    D+GYFI+PTVF +V D   IA+EEIFGPV  I+KFKT++EV+ RAN
Sbjct: 356 QEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRAN 415

Query: 293 DTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAA 352
           ++ YGLA+ + T ++D AN  + A+ AG+VW+NCY     Q+PFGG+K SG GRELG+  
Sbjct: 416 NSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYG 475

Query: 353 LDEYTELKTVT 363
           L  YTE+KTVT
Sbjct: 476 LQAYTEVKTVT 486

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  255 bits (653), Expect = 8e-79
 Identities = 144/377 (38%), Positives = 188/377 (49%), Gaps = 72/377 (19%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M  WK GPAL+ G  V++KPAEQTPLTAL++ +L ++AGFP GV++++PGYGP       
Sbjct: 168 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGP------- 220

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
                                               G            VD V FT    
Sbjct: 221 ----------------------------------TAGAAISSH----MDVDKVAFTGSTE 242

Query: 121 YIKSGVEQGGK-------LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFG------ 167
             K   E  GK       LE GGK          P +     D          G      
Sbjct: 243 VGKLIKEAAGKSNLKRVSLELGGKS---------PCIVFADADLDNAVEFAHQGVFYHQG 293

Query: 168 -PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLN 226
                  +    + + +         A   V  N  T            +D E + K+L+
Sbjct: 294 QCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQ----IDKEQYEKILD 349

Query: 227 YIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDE 286
            I+SG ++G KLE GG   G+KGYFI+PTVFS+VTDD +IA+EEIFGPVQ I+KFK+LD+
Sbjct: 350 LIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDD 409

Query: 287 VIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGR 346
           VI+RAN+T YGL++GI T +ID A T + A+ +G+VW+NCY  V  Q PFGGFK SG GR
Sbjct: 410 VIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGR 469

Query: 347 ELGKAALDEYTELKTVT 363
           ELG+    EYTE+KTVT
Sbjct: 470 ELGEYGFHEYTEVKTVT 486

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  246 bits (628), Expect = 3e-75
 Identities = 130/244 (53%), Positives = 167/244 (68%), Gaps = 17/244 (6%)

Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF----------VCAGSRT 420
               I  AA  SNLKRVSLELGGKSP ++ ADAD+D A  +              A SR 
Sbjct: 243 VGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRL 302

Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
           +V+E IYD FV+++VE+A    +G+P    V QGPQ+D E + K+L+ I+SG ++G KLE
Sbjct: 303 FVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLE 362

Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
            GG   G+KGYFI+PTVFS+VTDD +IA+EEIFGPVQ I+KFK+LD+VI+RAN+T YGL+
Sbjct: 363 CGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLS 422

Query: 541 SGIVTTNIDTANTFAHAINAG-------SAVVPQAPFGGFKESGIGRELGKAALDEYTEL 593
           +GI T +ID A T + A+ +G       S V  Q PFGGFK SG GRELG+    EYTE+
Sbjct: 423 AGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEV 482

Query: 594 KTVT 597
           KTVT
Sbjct: 483 KTVT 486

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  239 bits (611), Expect = 2e-72
 Identities = 102/377 (27%), Positives = 159/377 (42%), Gaps = 68/377 (18%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           + AWK  PALA G  V+ KP+  TP+T + +A +  +AG P G+++V+ G          
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG---------- 220

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---K 117
                                             + G          P V  V FT    
Sbjct: 221 --------------------------------GAETGSLLCHH----PNVAKVSFTGSVP 244

Query: 118 VLNYIKSGVEQGGK---LEAGGKRKG--DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 172
               +     +  K   LE GGK      K   +E  V   +  +F    +      +  
Sbjct: 245 TGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVF 304

Query: 173 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGV 232
           ++ + + + +E        +  G                  G +      KVL ++    
Sbjct: 305 VQREIMPQFLEEVVKRTKAIVVG--------DPLLTETRMGGLISKPQLDKVLGFVAQAK 356

Query: 233 EQGGKLEAGGKR------KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDE 286
           ++G ++  GG+       K   GYF+ P V  N  DD    +EEIFGPV +++ F T +E
Sbjct: 357 KEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEE 416

Query: 287 VIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGR 346
           V++RAN+T +GLASG+ T +I  A+  A  + AG+ +IN Y     + PFGG+K SG GR
Sbjct: 417 VLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGR 476

Query: 347 ELGKAALDEYTELKTVT 363
           E G+A +D Y++LKTV 
Sbjct: 477 ENGQATVDYYSQLKTVI 493

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  226 bits (577), Expect = 1e-67
 Identities = 88/246 (35%), Positives = 136/246 (55%), Gaps = 23/246 (9%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAG------SRTYVQE 424
            +   +A  +K V+LELGGKSPL+I  D +++ A        F+  G      +R +VQ 
Sbjct: 248 KVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQR 307

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
           +I   F+++ V++  A  VGDP     + G  +      KVL ++    ++G ++  GG+
Sbjct: 308 EIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGE 367

Query: 485 R------KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
                  K   GYF+ P V  N  DD    +EEIFGPV +++ F T +EV++RAN+T +G
Sbjct: 368 PLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFG 427

Query: 539 LASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYT 591
           LASG+ T +I  A+  A  + AG+  +        + PFGG+K SG GRE G+A +D Y+
Sbjct: 428 LASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYS 487

Query: 592 ELKTVT 597
           +LKTV 
Sbjct: 488 QLKTVI 493

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  214 bits (546), Expect = 2e-63
 Identities = 93/371 (25%), Positives = 152/371 (40%), Gaps = 61/371 (16%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           M AWK  PALAAG  V+LKP+E TPLTAL +A L +   FP GV+++L G G        
Sbjct: 154 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGK------- 205

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---K 117
                                              VGDP        P+V  V  T    
Sbjct: 206 ----------------------------------TVGDPLTGH----PKVRMVSLTGSIA 227

Query: 118 VLNYIKSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 174
              +I S      K   +E GGK         +      V +  +       G   T   
Sbjct: 228 TGEHIISHTASSIKRTHMELGGK---APVIVFDDADIEAVVEGVRTFGYYNAGQDCTAAC 284

Query: 175 -FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVE 233
                  + +   +      + + +   D  +T    ++          +V   ++    
Sbjct: 285 RIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLS----SLAHLERVGKAVEEAKA 340

Query: 234 QGG-KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 292
            G  K+  GG+++   GY+  PT+ +    D  I ++E+FGPV ++  F   ++V+  AN
Sbjct: 341 TGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWAN 400

Query: 293 DTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAA 352
           D++YGLAS + T ++  A+  +  +  G  W+N +  +V + P GG K SG G+++    
Sbjct: 401 DSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYG 460

Query: 353 LDEYTELKTVT 363
           L++YT ++ V 
Sbjct: 461 LEDYTVVRHVM 471

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  193 bits (491), Expect = 1e-55
 Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 18/241 (7%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----------FVCAGSRTYVQE 424
            + +  AS++KR  +ELGGK+P+++  DAD++                   A  R Y Q+
Sbjct: 231 HIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQK 290

Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGG 483
            IYDT V+K     A  K G P D+S + GP        +V   ++     G  K+  GG
Sbjct: 291 GIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGG 350

Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
           +++   GY+  PT+ +    D  I ++E+FGPV ++  F   ++V+  AND++YGLAS +
Sbjct: 351 EKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSV 410

Query: 544 VTTNIDTANTFAHAINAG-------SAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            T ++  A+  +  +  G         +V + P GG K SG G+++    L++YT ++ V
Sbjct: 411 WTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 470

Query: 597 T 597
            
Sbjct: 471 M 471

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  203 bits (516), Expect = 7e-59
 Identities = 90/281 (32%), Positives = 135/281 (48%), Gaps = 29/281 (10%)

Query: 343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAA-----ASNLKRVSLELGGKSPL 397
           G+G E+G A L E+  ++ +            I  AA       +  KR  +E GGK+ +
Sbjct: 238 GVGEEVG-AYLVEHPRIRFIN-FTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAI 295

Query: 398 VICADADVD----MAYYYCFVCAG------SRTYVQEDIYDTFVKKAVEKAAARKVGDPF 447
           ++   AD D          +   G      SR  + +  Y+  +++ +++A    VG P 
Sbjct: 296 IVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PA 354

Query: 448 DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI 507
           +++   GP V AE   KVL+YI+ G  +G  +  GGKR   +GYFI PTVF+ V    +I
Sbjct: 355 EENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARI 413

Query: 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG------ 561
           A+EEIFGPV ++I+ K   E +E ANDT YGL  G+ +   +         + G      
Sbjct: 414 AQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNR 473

Query: 562 ---SAVVPQAPFGGFKESGIGRELGKA-ALDEYTELKTVTE 598
               A+V   PFGGFK SG   + G    L  + E+K V E
Sbjct: 474 KITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  198 bits (503), Expect = 5e-57
 Identities = 94/365 (25%), Positives = 139/365 (38%), Gaps = 46/365 (12%)

Query: 4   WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP-MSAPYWRKS 62
                 +A G  V+ KPAE   +    V  +  +AGFP GV++ LPG G  + A      
Sbjct: 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHP 251

Query: 63  CLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYI 122
            +  + +     V   IY     +A  + A  +           G     V  T   +  
Sbjct: 252 RIRFINFTGSLEVGLKIY-----EAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLA 306

Query: 123 KSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVI 182
             GV        G K        +    +  V +      E +                 
Sbjct: 307 AEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERL----------------- 349

Query: 183 ERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGG 242
                   G          +        ++A         KVL+YI+ G  +G  +  GG
Sbjct: 350 ------SVG--------PAEENPDLGPVVSAEQER-----KVLSYIEIGKNEGQLV-LGG 389

Query: 243 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 302
           KR   +GYFI PTVF+ V    +IA+EEIFGPV ++I+ K   E +E ANDT YGL  G+
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449

Query: 303 VTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKA-ALDEYTEL 359
            +   +         + G+++ N     A+V   PFGGFK SG   + G    L  + E+
Sbjct: 450 YSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509

Query: 360 KTVTE 364
           K V E
Sbjct: 510 KAVAE 514

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  201 bits (511), Expect = 3e-58
 Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 19/251 (7%)

Query: 368 RSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYY----------YCFVCAG 417
            + ++           +K+  +ELGG  P ++  DAD+D+A                 A 
Sbjct: 239 FTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI 298

Query: 418 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG 477
                +  +Y   V++  ++ ++ +VGDP D +V  GP +      +++  I+  VE+GG
Sbjct: 299 KLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGG 358

Query: 478 KLEAGGKRKGDKGYFIEP-TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
           ++ AGG+R G            ++   D  + + E+F PV + ++ K LD+ IE AN   
Sbjct: 359 RVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRP 418

Query: 537 YGLASGIVTTNIDTANTFAHAINAG--------SAVVPQAPFGGFKESGIGRELGKAALD 588
           YGL + +   ++         +  G           +   PFGG K+SG+ RE    A++
Sbjct: 419 YGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVE 478

Query: 589 EYTELKTVTES 599
             T  KT+  +
Sbjct: 479 AVTAYKTIVFN 489

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  155 bits (391), Expect = 1e-41
 Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 20/242 (8%)

Query: 132 LEAGGK------RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
           +E GG          D     +       +   +          +  +  K ++EV +R 
Sbjct: 260 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 319

Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 245
           +  + G          D        I+          +++  I+  VE+GG++ AGG+R 
Sbjct: 320 SSLRVGDPR-------DPTVDVGPLISP-----SAVDEMMAAIEDAVEKGGRVLAGGRRL 367

Query: 246 GDKGYFIEP-TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 304
           G            ++   D  + + E+F PV + ++ K LD+ IE AN   YGL + +  
Sbjct: 368 GPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFG 427

Query: 305 TNIDTANTFAHAINAGSVWINCY-QAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
            ++         +  G+++IN   +  +   PFGG K+SG+ RE    A++  T  KT+ 
Sbjct: 428 RDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 487

Query: 364 ES 365
            +
Sbjct: 488 FN 489

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  119 bits (299), Expect = 3e-29
 Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 1/144 (0%)

Query: 74  YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
             +  +Y   V++  ++ ++ +VGDP D +V  GP +      +++  I+  VE+GG++ 
Sbjct: 302 LAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVL 361

Query: 134 AGGKRKGDKGYFIEP-TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 192
           AGG+R G            ++   D  + + E+F PV + ++ K LD+ IE AN   YGL
Sbjct: 362 AGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGL 421

Query: 193 ASGIVTTNIDTANTFAHAINAGSV 216
            + +   ++         +  G++
Sbjct: 422 DAAVFGRDVVKIRRAVRLLEVGAI 445

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  185 bits (471), Expect = 4e-53
 Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 24/245 (9%)

Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCF-----VCAGSRTYVQED 425
           I+ AAAA +L  V+LELGGKSP  +  D D         +  F      C      + + 
Sbjct: 193 IVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDP 252

Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
                + + ++K+     G+   +S   G  ++   F +V   I +     G        
Sbjct: 253 SIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQS-- 310

Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
                 +I PT+  +V     + +EEIFGPV  I+  ++L+E I+  N  +  LA  + +
Sbjct: 311 ----SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFS 366

Query: 546 TNIDTANTFAHAINAG---------SAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
            N           ++G            VP  PFGG   SG+G   GK + + ++  ++ 
Sbjct: 367 NNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSC 426

Query: 597 TESPL 601
               L
Sbjct: 427 LVKSL 431

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  158 bits (400), Expect = 4e-43
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 2/139 (1%)

Query: 240 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 299
           A G        +I PT+  +V     + +EEIFGPV  I+  ++L+E I+  N  +  LA
Sbjct: 302 AHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLA 361

Query: 300 SGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKAALDEYT 357
             + + N           ++G V  N       VP  PFGG   SG+G   GK + + ++
Sbjct: 362 LYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFS 421

Query: 358 ELKTVTESPLRSYTSHSIM 376
             ++     L +  +H   
Sbjct: 422 HRRSCLVKSLLNEEAHKAR 440

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 93.1 bits (230), Expect = 8e-21
 Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 6/125 (4%)

Query: 92  AARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF 151
                G+   +S   G  ++   F +V   I +     G              +I PT+ 
Sbjct: 266 LKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQS------SRYIAPTIL 319

Query: 152 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI 211
            +V     + +EEIFGPV  I+  ++L+E I+  N  +  LA  + + N           
Sbjct: 320 VDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAET 379

Query: 212 NAGSV 216
           ++G V
Sbjct: 380 SSGGV 384

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  171 bits (433), Expect = 2e-47
 Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 27/273 (9%)

Query: 343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
           G G E+G   + E+  +  +      + ++         + ++ + LELGGK   ++  D
Sbjct: 207 GRGSEIG-DYIVEHQAVNFIN----FTGSTGIGERIGKMAGMRPIMLELGGKDSAIVLED 261

Query: 403 AD----VDMAYYYCFVCAG------SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQ 452
           AD            F  +G       R  V E + D  V+K  EK  A  +G+P D +  
Sbjct: 262 ADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADI 321

Query: 453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 512
             P +D +    V   I    ++G       KR+G     I P +F  VT D ++A EE 
Sbjct: 322 T-PLIDTKSADYVEGLINDANDKGATALTEIKREG---NLICPILFDKVTTDMRLAWEEP 377

Query: 513 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG--------SAV 564
           FGPV  II+  +++E IE +N ++YGL + I T +   A   A  +  G           
Sbjct: 378 FGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG 437

Query: 565 VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
               PF G K+SG G +  K +++  T +K+V 
Sbjct: 438 TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  169 bits (429), Expect = 6e-47
 Identities = 87/368 (23%), Positives = 130/368 (35%), Gaps = 60/368 (16%)

Query: 1   MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
           +   K  PAL AG  +  KP  Q  ++ L +A    +AG P GV + + G G        
Sbjct: 158 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGS------- 210

Query: 61  KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
                                             ++GD   +       V+ + FT    
Sbjct: 211 ----------------------------------EIGDYIVEH----QAVNFINFTGSTG 232

Query: 121 YIKSGVEQGGK----LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176
             +   +  G     LE GGK        I             I         Q     K
Sbjct: 233 IGERIGKMAGMRPIMLELGGK-----DSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVK 287

Query: 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGG 236
            +   +E   D         V       N    A     +D +    V   I    ++G 
Sbjct: 288 RVLV-MESVADELVEKIREKVLALTIG-NPEDDADITPLIDTKSADYVEGLINDANDKGA 345

Query: 237 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 296
                 KR+G     I P +F  VT D ++A EE FGPV  II+  +++E IE +N ++Y
Sbjct: 346 TALTEIKREG---NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEY 402

Query: 297 GLASGIVTTNIDTANTFAHAINAGSVWINCY-QAVVPQAPFGGFKESGIGRELGKAALDE 355
           GL + I T +   A   A  +  G+V IN   Q      PF G K+SG G +  K +++ 
Sbjct: 403 GLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEA 462

Query: 356 YTELKTVT 363
            T +K+V 
Sbjct: 463 MTTVKSVV 470

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  109 bits (272), Expect = 2e-26
 Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 7/126 (5%)

Query: 241 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 300
              R  +K   I P V     DD+     E    +  I   K +DE IE       G + 
Sbjct: 283 VEVRGCEKTREIVPDVVPATEDDW---PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSE 339

Query: 301 GIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRE----LGKAALDEY 356
            I+T N   A  F   I+A +V++N          FG   E GI  +     G   L E 
Sbjct: 340 SILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLREL 399

Query: 357 TELKTV 362
           T  K V
Sbjct: 400 TTYKFV 405

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  100 bits (248), Expect = 4e-23
 Identities = 45/249 (18%), Positives = 63/249 (25%), Gaps = 63/249 (25%)

Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDM----------AYYYCFVCAGS 418
                  + +    N     LE G  +  +   ++                      A  
Sbjct: 199 IPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAE 258

Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
           +  V E I   F+   VE+     V                                   
Sbjct: 259 KLLVHEKIAKEFLPVIVEELRKHGVEVRGC------------------------------ 288

Query: 479 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
                    +K   I P V     DD+     E    +  I   K +DE IE       G
Sbjct: 289 ---------EKTREIVPDVVPATEDDW---PTEYLDLIIAIKVVKNVDEAIEHIKKYSTG 336

Query: 539 LASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRE----LGKAAL 587
            +  I+T N   A  F   I+A +  V           FG   E GI  +     G   L
Sbjct: 337 HSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGL 396

Query: 588 DEYTELKTV 596
            E T  K V
Sbjct: 397 RELTTYKFV 405

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 69.7 bits (169), Expect = 3e-13
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 135 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 194
              R  +K   I P V     DD+     E    +  I   K +DE IE       G + 
Sbjct: 283 VEVRGCEKTREIVPDVVPATEDDW---PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSE 339

Query: 195 GIVTTNIDTANTFAHAINAGSV 216
            I+T N   A  F   I+A +V
Sbjct: 340 SILTENYSNAKKFVSEIDAAAV 361

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score =  103 bits (256), Expect = 7e-24
 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 12/128 (9%)

Query: 250 YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDT 309
                   S          EEIFGP   I+  + + +++  +      L + I  T  D 
Sbjct: 353 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDY 412

Query: 310 --ANTFAHAIN--AGSVWINCY-------QAVVPQAPFGGFKESGIGRELGKAALDEYTE 358
              +     +   AG +  N +        A+V   P+     S     +G  A+  +  
Sbjct: 413 PQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIHRWLR 471

Query: 359 LKTVTESP 366
                  P
Sbjct: 472 PVAYQALP 479

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 88.6 bits (218), Expect = 4e-19
 Identities = 21/128 (16%), Positives = 36/128 (28%), Gaps = 19/128 (14%)

Query: 491 YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDT 550
                   S          EEIFGP   I+  + + +++  +      L + I  T  D 
Sbjct: 353 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDY 412

Query: 551 A------------------NTFAHAINAGSAVVPQAPFGGFKESGIGRELGKAALDEYTE 592
                              N +   +  G A+V   P+     S     +G  A+  +  
Sbjct: 413 PQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIHRWLR 471

Query: 593 LKTVTESP 600
                  P
Sbjct: 472 PVAYQALP 479

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 66.3 bits (160), Expect = 5e-12
 Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 23/137 (16%)

Query: 144 YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDT 203
                   S          EEIFGP   I+  + + +++  +      L + I  T  D 
Sbjct: 353 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDY 412

Query: 204 --ANTFAHAIN--AGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGY------- 250
              +     +   AG +       V N   +GVE G  +  GG                 
Sbjct: 413 PQVSQLIPRLEEIAGRL-------VFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEA 465

Query: 251 ---FIEPTVFSNVTDDF 264
              ++ P  +  + +  
Sbjct: 466 IHRWLRPVAYQALPESL 482

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.5 bits (143), Expect = 6e-10
 Identities = 23/130 (17%), Positives = 37/130 (28%), Gaps = 11/130 (8%)

Query: 239 EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 298
           +   +           TV ++   DF    +E            + +  I+  N      
Sbjct: 301 DKLNELGKLTEAIQCKTVDADEEQDF---DKEFLSLDLAAKFVTSTESAIQHINTHSSRH 357

Query: 299 ASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI------GRELGKAA 352
              IVT N   A  F   +++  V+ N          +G   E GI       R  G   
Sbjct: 358 TDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR--GPVG 415

Query: 353 LDEYTELKTV 362
           LD     +  
Sbjct: 416 LDGLVSYQYQ 425

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.9 bits (126), Expect = 6e-08
 Identities = 28/218 (12%), Positives = 54/218 (24%), Gaps = 23/218 (10%)

Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGSRTYVQEDIYD 428
              S++++     +    V     G   + +  DAD+  A         +       +  
Sbjct: 205 PRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMET 264

Query: 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD 488
             +     K          +  V      D +                   +   +    
Sbjct: 265 LLINPKFSKWWEVLENLTLEGGVTIHATKDLKTA---------------YFDKLNELGKL 309

Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI 548
                  TV ++   DF    +E            + +  I+  N         IVT N 
Sbjct: 310 TEAIQCKTVDADEEQDF---DKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENK 366

Query: 549 DTANTFAHAINAGSAVV---PQAPFGGFKESGIGRELG 583
             A  F   +++         +   G     G G E+G
Sbjct: 367 ANAEKFMKGVDSSGVYWNASTRFADGF--RYGFGAEVG 402

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.6 bits (120), Expect = 3e-07
 Identities = 28/210 (13%), Positives = 50/210 (23%), Gaps = 26/210 (12%)

Query: 23  QTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDIYDT 82
           Q   T   V+ L  Q  + D V+        +                    +  D    
Sbjct: 182 QLIETRQDVSDLLDQDEYIDLVVPR-GSNALVRKIKDTTKIPVLGHADGICSIYLDED-- 238

Query: 83  FVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTK---------VLNYIKSGVEQGG--- 130
               A    A R   D           ++ ++                ++ GV       
Sbjct: 239 ----ADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKD 294

Query: 131 ----KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
                 +   +           TV ++   DF    +E            + +  I+  N
Sbjct: 295 LKTAYFDKLNELGKLTEAIQCKTVDADEEQDF---DKEFLSLDLAAKFVTSTESAIQHIN 351

Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
                    IVT N   A  F   +++  V
Sbjct: 352 THSSRHTDAIVTENKANAEKFMKGVDSSGV 381

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	605
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	100.0
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	100.0
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	99.97
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	99.97
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	99.95
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	99.94
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	99.82
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	99.81
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	99.5

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=2.2e-60  Score=515.37  Aligned_cols=241  Identities=54%  Similarity=0.837  Sum_probs=226.9

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...||||.   .+|+.|.+.++..++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       233 ~~i~fTGS~---~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~  309 (494)
T d1bxsa_         233 DKVAFTGST---EVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY  309 (494)
T ss_dssp             SEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHH
T ss_pred             CEEEecCCH---HHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchh
Confidence            445789985   9999999888765799999999999999999999999986          456699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|++++.||......|+|++|||+.++++++++
T Consensus       310 d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~  389 (494)
T d1bxsa_         310 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRI  389 (494)
T ss_dssp             HHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHH
T ss_pred             HHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHH
Confidence            99999999999999999999999999999999999999999999999999999999887788999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcc-------cCCCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~-------~~~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+       ..+.+||||+|.||+|+
T Consensus       390 ~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~  469 (494)
T d1bxsa_         390 AKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGR  469 (494)
T ss_dssp             HHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESC
T ss_pred             HhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCCh
Confidence            99999999999999999999999999999999999999999999999999999983       33568999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEcCC
Q psy1099         581 ELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      ++|.+++++||+.|+|+++..
T Consensus       470 ~~g~~~~~~ft~~k~i~~~~~  490 (494)
T d1bxsa_         470 ELGEYGFHEYTEVKTVTIKIS  490 (494)
T ss_dssp             BSHHHHHHTTEEEEEEEEECS
T ss_pred             hhHHHHHHHhcceEEEEEecC
Confidence            999999999999999998764

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=7e-60  Score=511.04  Aligned_cols=239  Identities=53%  Similarity=0.864  Sum_probs=225.6

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +...||||.   .+|++|++.++.+++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       233 ~~v~fTGS~---~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~  309 (494)
T d1o04a_         233 DKVAFTGST---EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIY  309 (494)
T ss_dssp             CEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHH
T ss_pred             CEEEEeCCH---HHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhh
Confidence            445788885   9999998888766899999999999999999999999996          566699999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI  507 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~  507 (605)
                      |+|++.+.+++.++++|+|.++.+++||++++.+++++++++++++++|+++++||....+.|+|++|||+.++++++++
T Consensus       310 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~  389 (494)
T d1o04a_         310 DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTI  389 (494)
T ss_dssp             HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHH
T ss_pred             HHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999887778999999999999999999


Q ss_pred             cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCCCC
Q psy1099         508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGIGR  580 (605)
Q Consensus       508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~G~  580 (605)
                      ++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.       .+.+||||+|.||+|+
T Consensus       390 ~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~  469 (494)
T d1o04a_         390 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGR  469 (494)
T ss_dssp             HHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESC
T ss_pred             HhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCc
Confidence            999999999999999999999999999999999999999999999999999999832       3568999999999999


Q ss_pred             hhHHHHHHHhhhceEEEEc
Q psy1099         581 ELGKAALDEYTELKTVTES  599 (605)
Q Consensus       581 ~~g~~~~~~~~~~k~v~~~  599 (605)
                      ++|.+++++||+.|+|+++
T Consensus       470 ~~g~~~~~~ft~~k~v~~~  488 (494)
T d1o04a_         470 ELGEYGLQAYTEVKTVTVK  488 (494)
T ss_dssp             BSTGGGGGGGEEEEEEEEE
T ss_pred             hhHHHHHHHhcCeEEEEEe
Confidence            9999999999999999886

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=2.1e-57  Score=491.81  Aligned_cols=241  Identities=37%  Similarity=0.633  Sum_probs=224.2

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI  426 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~  426 (605)
                      .+...||||+   .+|++|.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||+++
T Consensus       234 v~~V~fTGS~---~~G~~i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~  309 (503)
T d1a4sa_         234 VAKVSFTGSV---PTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREI  309 (503)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGG
T ss_pred             cCEEEEeCCH---HHHHHHHHHhhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEech
Confidence            3444678885   999999888775 999999999999999999999999986          45569999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc------CCCCeeEeeEEeec
Q psy1099         427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK------GDKGYFIEPTVFSN  500 (605)
Q Consensus       427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~------~~~g~~~~Pti~~~  500 (605)
                      +++|++++.+.+.++++|+|.++.+++||++++.+++++++++++++++|+++++||...      ...|+|++|||+.+
T Consensus       310 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~  389 (503)
T d1a4sa_         310 MPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDN  389 (503)
T ss_dssp             HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEES
T ss_pred             hhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeC
Confidence            999999999999999999999999999999999999999999999999999999999743      24789999999999


Q ss_pred             CCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCccccc
Q psy1099         501 VTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGF  573 (605)
Q Consensus       501 ~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~  573 (605)
                      ++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+++       .+.+||||+
T Consensus       390 ~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~  469 (503)
T d1a4sa_         390 CRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGY  469 (503)
T ss_dssp             CCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCS
T ss_pred             CCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCc
Confidence            9999999999999999999999999999999999999999999999999999999999999833       346799999


Q ss_pred             CCCCCCChhHHHHHHHhhhceEEEEcCC
Q psy1099         574 KESGIGRELGKAALDEYTELKTVTESPL  601 (605)
Q Consensus       574 ~~SG~G~~~g~~~~~~~~~~k~v~~~~~  601 (605)
                      |.||+|+++|.+++++||+.|+|+++..
T Consensus       470 k~SG~G~~~g~~~l~~~t~~k~v~~~~~  497 (503)
T d1a4sa_         470 KMSGFGRENGQATVDYYSQLKTVIVEMG  497 (503)
T ss_dssp             GGGEECCBSTTGGGGGSEEEEEEEECCS
T ss_pred             ccCcCCcchHHHHHHHhhCeEEEEEcCC
Confidence            9999999999999999999999998754

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.6e-57  Score=487.12  Aligned_cols=238  Identities=31%  Similarity=0.540  Sum_probs=222.6

Q ss_pred             ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY  427 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~  427 (605)
                      +..+||||+   .+|+.|.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++
T Consensus       218 ~~v~fTGS~---~~G~~i~~~a~~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  293 (474)
T d1wnda_         218 RMVSLTGSI---ATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY  293 (474)
T ss_dssp             EEEEEESCH---HHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTH
T ss_pred             CEEEeeCCH---HHHHHHHHhhhc-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccc
Confidence            334678885   999999888876 999999999999999999999999996          566799999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCe-EEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099         428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK-LEAGGKRKGDKGYFIEPTVFSNVTDDFK  506 (605)
Q Consensus       428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~-v~~gg~~~~~~g~~~~Pti~~~~~~~~~  506 (605)
                      |+|+++|++++.++++|+|.++.+++||+++..+.+++.+++++++..|+. ++.|+......|+|++|||+.+++++++
T Consensus       294 d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~  373 (474)
T d1wnda_         294 DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDA  373 (474)
T ss_dssp             HHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSH
T ss_pred             hhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeeccccccc
Confidence            999999999999999999999999999999999999999999999999984 6677776667899999999999999999


Q ss_pred             ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCCC
Q psy1099         507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGIG  579 (605)
Q Consensus       507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~G  579 (605)
                      +++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.++       .+.+||||+|+||+|
T Consensus       374 ~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G  453 (474)
T d1wnda_         374 IVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYG  453 (474)
T ss_dssp             HHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEEC
T ss_pred             ceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccC
Confidence            9999999999999999999999999999999999999999999999999999999833       356899999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEc
Q psy1099         580 RELGKAALDEYTELKTVTES  599 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~  599 (605)
                      +++|.+++++||+.|+|+++
T Consensus       454 ~~~g~~gl~~~t~~k~v~i~  473 (474)
T d1wnda_         454 KDMSLYGLEDYTVVRHVMVK  473 (474)
T ss_dssp             CBSHHHHHHTTEEEEEEEEE
T ss_pred             ccCHHHHHHHcCCEEEEEEe
Confidence            99999999999999999986

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1e-55  Score=480.70  Aligned_cols=236  Identities=36%  Similarity=0.560  Sum_probs=215.1

Q ss_pred             ceeEEEecCCccccHHHHHHHHHh-----ccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEE
Q psy1099         358 ELKTVTESPLRSYTSHSIMAAAAA-----SNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYV  422 (605)
Q Consensus       358 ~~k~~t~s~~~~~~g~~v~~~~a~-----~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v  422 (605)
                      ....|||+.   .+|+.+++.++.     +++||+++|||||||+||++|||++.|+          .|+.|++++|+||
T Consensus       254 ~~I~FTGs~---~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v  330 (516)
T d1uzba_         254 RFINFTGSL---EVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLIL  330 (516)
T ss_dssp             CEEEEESCH---HHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEE
T ss_pred             CEEecccch---hHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCcccc
Confidence            344688885   999999987762     4789999999999999999999999986          5667999999999


Q ss_pred             ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCC
Q psy1099         423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVT  502 (605)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~  502 (605)
                      |++++|+|++++.+++.++++| |.++.+++||+++..++++++++++++++.|+.+ .||...+..|+|++|||+.+++
T Consensus       331 ~~~i~d~~~~~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~  408 (516)
T d1uzba_         331 TQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVP  408 (516)
T ss_dssp             EHHHHHHHHHHHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCC
T ss_pred             ccccccchhhHHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCC
Confidence            9999999999999999999999 5678899999999999999999999999888655 5666556789999999999999


Q ss_pred             CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCccccc
Q psy1099         503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGF  573 (605)
Q Consensus       503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~  573 (605)
                      +++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|++.         .+.+||||+
T Consensus       409 ~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~  488 (516)
T d1uzba_         409 PKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGF  488 (516)
T ss_dssp             TTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCS
T ss_pred             CCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCc
Confidence            99999999999999999999999999999999999999999999999999999999999833         246799999


Q ss_pred             CCCCCCChhH-HHHHHHhhhceEEEE
Q psy1099         574 KESGIGRELG-KAALDEYTELKTVTE  598 (605)
Q Consensus       574 ~~SG~G~~~g-~~~~~~~~~~k~v~~  598 (605)
                      |.||+|+++| .+++++||+.|+|+.
T Consensus       489 k~SG~G~~~G~~~~l~~~~~~k~v~~  514 (516)
T d1uzba_         489 KLSGTNAKTGALDYLRLFLEMKAVAE  514 (516)
T ss_dssp             GGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred             ccccCCcccchHHHHHHhCCeeeEEE
Confidence            9999999876 789999999999986

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.2e-51  Score=436.45  Aligned_cols=233  Identities=28%  Similarity=0.419  Sum_probs=210.2

Q ss_pred             eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099         359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD  428 (605)
Q Consensus       359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~  428 (605)
                      ...||+++   .+|+.+.+.++. ++||+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|
T Consensus       181 ~v~fTGs~---~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~  256 (446)
T d1ad3a_         181 HIMYTGST---AVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQN  256 (446)
T ss_dssp             EEEEESCH---HHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHH
T ss_pred             ceEEECcH---HHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccchhH
Confidence            34678885   999999988876 999999999999999999999999996          5666999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099         429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA  508 (605)
Q Consensus       429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~  508 (605)
                      +|++++.+.++.+ +|+|.++.+++||++++.+++++..+++++     +...|+. .+..++|++|||+.+++++|+++
T Consensus       257 ~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~-~~~~~~~~~Ptil~~v~~~~~~~  329 (446)
T d1ad3a_         257 QIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGT-WDQSSRYIAPTILVDVDPQSPVM  329 (446)
T ss_dssp             HHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCC-EETTTTEECCEEECSCCTTSGGG
T ss_pred             HHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hccccee-ecCCCCCcCCEEEECCCCCCHHH
Confidence            9999999998887 899999999999999999999998877554     4444433 34578899999999999999999


Q ss_pred             ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccCCCCCC
Q psy1099         509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFKESGIG  579 (605)
Q Consensus       509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~~SG~G  579 (605)
                      +||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.+.         .+.+||||+|.||+|
T Consensus       330 ~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G  409 (446)
T d1ad3a_         330 QEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMG  409 (446)
T ss_dssp             TSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGEEC
T ss_pred             hCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCccccccceec
Confidence            99999999999999999999999999999999999999999999999999999832         356899999999999


Q ss_pred             ChhHHHHHHHhhhceEEEEcCCC
Q psy1099         580 RELGKAALDEYTELKTVTESPLR  602 (605)
Q Consensus       580 ~~~g~~~~~~~~~~k~v~~~~~~  602 (605)
                      +++|.+++++||+.|+|+++++.
T Consensus       410 ~~~g~~~l~~ft~~k~v~~~~~~  432 (446)
T d1ad3a_         410 AYHGKKSFETFSHRRSCLVKSLL  432 (446)
T ss_dssp             CCSTHHHHHHTEEEEEEEECCCC
T ss_pred             cchHHHHHHHHhceeEEEEccCC
Confidence            99999999999999999987653

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=1.7e-50  Score=438.24  Aligned_cols=234  Identities=27%  Similarity=0.423  Sum_probs=207.8

Q ss_pred             EEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHHH
Q psy1099         361 TVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDTF  430 (605)
Q Consensus       361 ~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~~  430 (605)
                      .+|++.   .+|+.+.+.+   +.+|+++|||||||+||++|||++.|+          .|+.|++++|+|||++++|+|
T Consensus       238 ~ftGs~---~~g~~i~~~~---~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f  311 (499)
T d1ky8a_         238 SFTGST---EVGERVVKVG---GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKL  311 (499)
T ss_dssp             EEESCH---HHHHHHHHHH---CSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHH
T ss_pred             Eeeccc---ccceEEeecc---cccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHH
Confidence            567774   7788776654   468999999999999999999999986          566799999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCe-eEeeEEeecCCCCCcccc
Q psy1099         431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY-FIEPTVFSNVTDDFKIAR  509 (605)
Q Consensus       431 ~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~-~~~Pti~~~~~~~~~~~~  509 (605)
                      +++|+++++++++|+|.++++++||+++..+++++++++++++.+|++++.||......+. +..+++..++.+|+++++
T Consensus       312 ~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  391 (499)
T d1ky8a_         312 VEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYK  391 (499)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEECCHHHHTTSHHHH
T ss_pred             HHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccccccccccccccccCCCCChhhh
Confidence            9999999999999999999999999999999999999999999999999999976532211 222233345667999999


Q ss_pred             cceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCCCCh
Q psy1099         510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGIGRE  581 (605)
Q Consensus       510 eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~G~~  581 (605)
                      ||+||||++|++|+|.+|||+++|+++|||++||||+|.++++++++++++|++.        .+.+||||+|.||+|++
T Consensus       392 eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~  471 (499)
T d1ky8a_         392 REVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFRE  471 (499)
T ss_dssp             SCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCB
T ss_pred             ccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCC
Confidence            9999999999999999999999999999999999999999999999999999832        35689999999999999


Q ss_pred             hHHHHHHHhhhceEEEEcC
Q psy1099         582 LGKAALDEYTELKTVTESP  600 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~~~~  600 (605)
                      +|.+++++||+.|+|+++.
T Consensus       472 ~g~~~~~~~~~~k~i~~~~  490 (499)
T d1ky8a_         472 GIGYAVEAVTAYKTIVFNY  490 (499)
T ss_dssp             STTTTHHHHEEEEEEEEEC
T ss_pred             CHHHHHHHhhCEEEEEEcC
Confidence            9999999999999999863

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=1.8e-47  Score=413.21  Aligned_cols=230  Identities=31%  Similarity=0.435  Sum_probs=208.7

Q ss_pred             eEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHH
Q psy1099         360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDT  429 (605)
Q Consensus       360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~  429 (605)
                      ..||++.   .+|+.+.+.+   ..+|+++|+||+||+||++|||++.|+          .|+.|++++++|||++++++
T Consensus       225 v~ftGs~---~~~~~i~~~a---~~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~  298 (474)
T d1euha_         225 INFTGST---GIGERIGKMA---GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE  298 (474)
T ss_dssp             EEEESCH---HHHHHHHHHT---TTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHH
T ss_pred             EEecCcc---ccccchhhhc---ccceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhh
Confidence            3567774   7788776654   368999999999999999999999986          56679999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccc
Q psy1099         430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR  509 (605)
Q Consensus       430 ~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~  509 (605)
                      |++.++++...++.|++.+. .+++|+++....+++.+.+......++..+.++.   ..|+|++|||+..+++++++++
T Consensus       299 ~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~Ptvl~~~~~~~~~~~  374 (474)
T d1euha_         299 LVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK---REGNLICPILFDKVTTDMRLAW  374 (474)
T ss_dssp             HHHHHHHHHHTSCBSCGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC---EETTEECCEEEESCCTTSGGGT
T ss_pred             hhHhhhhhhhhccccCcccc-cccccccchHHHHHHHHHHHhhhcccccccccCC---CCCCCcCCEEEecCCCcchhhh
Confidence            99999999999999998875 5689999999999999999999988888776544   3689999999999999999999


Q ss_pred             cceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCCCCh
Q psy1099         510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGIGRE  581 (605)
Q Consensus       510 eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~G~~  581 (605)
                      ||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.+.        .+.+||||+|.||+|++
T Consensus       375 eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~  454 (474)
T d1euha_         375 EEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQ  454 (474)
T ss_dssp             SCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCB
T ss_pred             cccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCcc
Confidence            9999999999999999999999999999999999999999999999999999832        34589999999999999


Q ss_pred             hHHHHHHHhhhceEEEEc
Q psy1099         582 LGKAALDEYTELKTVTES  599 (605)
Q Consensus       582 ~g~~~~~~~~~~k~v~~~  599 (605)
                      +|++++++||+.|+|+.+
T Consensus       455 ~g~~~l~~~~~~k~v~~~  472 (474)
T d1euha_         455 GVKYSIEAMTTVKSVVFD  472 (474)
T ss_dssp             SHHHHHHHTEEEEEEEEE
T ss_pred             CHHHHHHHhCcEEEEEEe
Confidence            999999999999999875

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=100.00  E-value=1.2e-40  Score=360.07  Aligned_cols=221  Identities=17%  Similarity=0.199  Sum_probs=171.8

Q ss_pred             cceeEEEecCCccccHHHHHHHHHhcccccee--eecCCCCcEEEcCCCCHHHHH------------hcccccccCeEEE
Q psy1099         357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVS--LELGGKSPLVICADADVDMAY------------YYCFVCAGSRTYV  422 (605)
Q Consensus       357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~--lElgG~~p~iV~~dad~~~a~------------~~~~c~a~~~v~v  422 (605)
                      ....+||||+   .+|+.+.+.++. +++|+.  +|||||||+||++|||++.|+            .|+.|++++|+||
T Consensus       218 v~~V~FTGS~---~~g~~i~~~aa~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v  293 (504)
T d1ez0a_         218 IKAVGFTGSV---GGGRALFNLAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA  293 (504)
T ss_dssp             CCEEEEESCH---HHHHHHHHHHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEE
T ss_pred             cceeeeccch---HHHHHHHhhhhc-ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccc
Confidence            3445789986   999999988886 887754  499999999999999998652            5667999999998


Q ss_pred             ecccHH-HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEe---
Q psy1099         423 QEDIYD-TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF---  498 (605)
Q Consensus       423 ~~~~~~-~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~---  498 (605)
                      +++.++ .|++.+.+.+..   +   ++.+.+||+++..+++++   ++.+...++++..|+...    .+..|+++   
T Consensus       294 ~~~~~~~~~~~~~~~~~~~---~---~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  360 (504)
T d1ez0a_         294 LNTPETQAFIETAQSLIRQ---Q---SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAES----PCVASALFVTS  360 (504)
T ss_dssp             ESSHHHHHHHHHHHHHHHH---C---CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCCT----TSBCCEEEEEE
T ss_pred             hhhhhHHHHhhhhhhhhhh---c---ccccccccchhhhhhhhh---hhhhhhhhhhcccccccc----cccCCcccccc
Confidence            888655 566666555443   2   357889999999887776   455667788888877532    23333333   


Q ss_pred             ecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcC--CHHHHHHHHHHcc--cCcccCCC-------
Q psy1099         499 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT--NIDTANTFAHAIN--AGSAVVPQ-------  567 (605)
Q Consensus       499 ~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~--d~~~~~~~~~~~~--~G~~~~~~-------  567 (605)
                      .++..++++++||+||||++|++|+|++|||+++|+++|||+++|||+  |..++.+++++++  +|.+.+|.       
T Consensus       361 ~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v  440 (504)
T d1ez0a_         361 SENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEV  440 (504)
T ss_dssp             HHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCC
T ss_pred             ccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCccccee
Confidence            234456889999999999999999999999999999999999999996  4568899999997  68743331       


Q ss_pred             -------CcccccCCCCCCChhHHHHHHHhhhceE
Q psy1099         568 -------APFGGFKESGIGRELGKAALDEYTELKT  595 (605)
Q Consensus       568 -------~PfGG~~~SG~G~~~g~~~~~~~~~~k~  595 (605)
                             .||||.+.||+| ..|.++++.|+++.+
T Consensus       441 ~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~  474 (504)
T d1ez0a_         441 GYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVA  474 (504)
T ss_dssp             SSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEE
T ss_pred             cCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhh
Confidence                   278899999966 468999999976544

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=4.4e-36  Score=323.96  Aligned_cols=254  Identities=55%  Similarity=0.991  Sum_probs=231.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+||||.+|+++.+++++|+++|+|+|++|+|+|++++....+                      
T Consensus       169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~  248 (494)
T d1bxsa_         169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK  248 (494)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999876532111                      


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    +|++||+++||+|++++++++++++
T Consensus       249 ~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~----~rv~V~~~~~d~f~~~l~~~~~~~~  324 (494)
T d1bxsa_         249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAA----SRLFVEESIYDEFVRRSVERAKKYV  324 (494)
T ss_dssp             HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCC----CEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred             HHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccc----eEEecccchhHHHHHHHHhhhhhee
Confidence                                                        0345555    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|.++++.+||++++.+++++.++|+.|+++|+++..||..                                     
T Consensus       325 ~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~-------------------------------------  367 (494)
T d1bxsa_         325 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGP-------------------------------------  367 (494)
T ss_dssp             BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSE-------------------------------------
T ss_pred             eeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCc-------------------------------------
Confidence            9999999999999999999999988888888877777766643                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       368 ---------------------------------------------------------------------~~~~g~~~~Pt  378 (494)
T d1bxsa_         368 ---------------------------------------------------------------------WGNKGYFIQPT  378 (494)
T ss_dssp             ---------------------------------------------------------------------ECSSSCEECCE
T ss_pred             ---------------------------------------------------------------------cCCCceeEcCE
Confidence                                                                                 23468999999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.++...+.+|
T Consensus       379 vl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~P  458 (494)
T d1bxsa_         379 VFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCP  458 (494)
T ss_dssp             EEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSC
T ss_pred             EEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998877788999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+|+++|.+++++|++.|+++..
T Consensus       459 fGG~~~SG~G~~~g~~~~~~ft~~k~i~~~  488 (494)
T d1bxsa_         459 FGGFKMSGNGRELGEYGFHEYTEVKTVTIK  488 (494)
T ss_dssp             BCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             cCccccccCChhhHHHHHHHhcceEEEEEe
Confidence            999999999999999999999999998876

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=2.8e-35  Score=317.46  Aligned_cols=254  Identities=54%  Similarity=0.971  Sum_probs=230.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|+++++...|                      
T Consensus       169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~  248 (494)
T d1o04a_         169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ  248 (494)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999876532111                      


Q ss_pred             --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099          60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK   95 (605)
Q Consensus        60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~   95 (605)
                                                                  .|.|.++    ++++||+++||+|+++++++...++
T Consensus       249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~----~~v~v~~~i~d~f~~~l~~~~~~~~  324 (494)
T d1o04a_         249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG----SRTFVQEDIYDEFVERSVARAKSRV  324 (494)
T ss_dssp             HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred             HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCccccccc----ccccccchhhHHHHHHHHHHhhhee
Confidence                                                        0344444    8999999999999999999999999


Q ss_pred             cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099          96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF  175 (605)
Q Consensus        96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~  175 (605)
                      +|+|++.++++||++++.+++++.++|+.+.++|+++.+||..                                     
T Consensus       325 ~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~-------------------------------------  367 (494)
T d1o04a_         325 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI-------------------------------------  367 (494)
T ss_dssp             BCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSB-------------------------------------
T ss_pred             ecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-------------------------------------
Confidence            9999999999999999999999988888888777777777643                                     


Q ss_pred             CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099         176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT  255 (605)
Q Consensus       176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt  255 (605)
                                                                                           ....|+|++||
T Consensus       368 ---------------------------------------------------------------------~~~~g~~~~Pt  378 (494)
T d1o04a_         368 ---------------------------------------------------------------------AADRGYFIQPT  378 (494)
T ss_dssp             ---------------------------------------------------------------------CCSSSSCBCCE
T ss_pred             ---------------------------------------------------------------------CCCCCceEcCE
Confidence                                                                                 22367899999


Q ss_pred             EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099         256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP  335 (605)
Q Consensus       256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p  335 (605)
                      |+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.++...+.+|
T Consensus       379 vl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~P  458 (494)
T d1o04a_         379 VFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSP  458 (494)
T ss_dssp             EEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSC
T ss_pred             EEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998777788999


Q ss_pred             ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         336 FGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |||+|.||+|+++|.++++.|++.|+++..
T Consensus       459 fGG~~~SG~G~~~g~~~~~~ft~~k~v~~~  488 (494)
T d1o04a_         459 FGGYKMSGSGRELGEYGLQAYTEVKTVTVK  488 (494)
T ss_dssp             BCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred             cCCcccccCCchhHHHHHHHhcCeEEEEEe
Confidence            999999999999999999999999998765

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=6.8e-35  Score=314.60  Aligned_cols=261  Identities=37%  Similarity=0.670  Sum_probs=235.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|+.+.+..++                      
T Consensus       172 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~  251 (503)
T d1a4sa_         172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVME  251 (503)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998643211100                      


Q ss_pred             ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099          60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG   97 (605)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg   97 (605)
                                                                .|.|.++    +|++||+++|++|++++.+..+++++|
T Consensus       252 ~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~----~ri~v~~~~~~~~~~~l~~~~~~~~~g  327 (503)
T d1a4sa_         252 MSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNG----TRVFVQREIMPQFLEEVVKRTKAIVVG  327 (503)
T ss_dssp             HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCC----CEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred             HhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccC----cceEEEechhhhHHHHHHHhhhhEeec
Confidence                                                      0345555    899999999999999999999999999


Q ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099          98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT  177 (605)
Q Consensus        98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~  177 (605)
                      +|.+..+.+||++++.+++++.++++.+.++|++++.||......                                   
T Consensus       328 ~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~-----------------------------------  372 (503)
T d1a4sa_         328 DPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPS-----------------------------------  372 (503)
T ss_dssp             CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCS-----------------------------------
T ss_pred             cccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCC-----------------------------------
Confidence            999999999999999999999999999999999999998752100                                   


Q ss_pred             HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099         178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF  257 (605)
Q Consensus       178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl  257 (605)
                                                                                       ......|+|++|||+
T Consensus       373 -----------------------------------------------------------------~~~~~~G~~~~Ptvl  387 (503)
T d1a4sa_         373 -----------------------------------------------------------------DPKLKNGYFMSPCVL  387 (503)
T ss_dssp             -----------------------------------------------------------------SGGGTTSCCBCCEEE
T ss_pred             -----------------------------------------------------------------CcccCCceEEcCEEE
Confidence                                                                             001246899999999


Q ss_pred             eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099         258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG  337 (605)
Q Consensus       258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG  337 (605)
                      .+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+|||
T Consensus       388 ~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfG  467 (503)
T d1a4sa_         388 DNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFG  467 (503)
T ss_dssp             ESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBC
T ss_pred             eCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999877777889999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      |+|.||+|+++|.+++++|++.|+++.+.
T Consensus       468 G~k~SG~G~~~g~~~l~~~t~~k~v~~~~  496 (503)
T d1a4sa_         468 GYKMSGFGRENGQATVDYYSQLKTVIVEM  496 (503)
T ss_dssp             CSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred             CcccCcCCcchHHHHHHHhhCeEEEEEcC
Confidence            99999999999999999999999988764

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-34  Score=310.49  Aligned_cols=254  Identities=35%  Similarity=0.594  Sum_probs=228.0

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      ++|++++||++||+||+|||+.+|+++.++++++++ ++|+|++|+|+|++++....|                      
T Consensus       155 ~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~  233 (474)
T d1wnda_         155 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII  233 (474)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred             hhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHH
Confidence            578999999999999999999999999999999987 599999999999876543211                      


Q ss_pred             -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099          60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV   96 (605)
Q Consensus        60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v   96 (605)
                                                                 .|.|.++    +|++||+++||+|++++++..+++++
T Consensus       234 ~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~----~rv~V~~~i~d~~~~~l~~~~~~l~~  309 (474)
T d1wnda_         234 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAA----CRIYAQKGIYDTLVEKLGAAVATLKS  309 (474)
T ss_dssp             HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCC----CEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred             HhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccc----cccccccccchhhhhhhHHHHHhhcc
Confidence                                                       1345555    89999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099          97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK  176 (605)
Q Consensus        97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~  176 (605)
                      |+|.+.++.+||+++..+.+++..+++.+.+.|+...++|.                                       
T Consensus       310 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~---------------------------------------  350 (474)
T d1wnda_         310 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGG---------------------------------------  350 (474)
T ss_dssp             CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECC---------------------------------------
T ss_pred             CCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCC---------------------------------------
Confidence            99999999999999999999999999888888774333332                                       


Q ss_pred             CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099         177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV  256 (605)
Q Consensus       177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  256 (605)
                                                                                        ......|+|++|||
T Consensus       351 ------------------------------------------------------------------~~~~~~g~~~~Pti  364 (474)
T d1wnda_         351 ------------------------------------------------------------------EKRKGNGYYYAPTL  364 (474)
T ss_dssp             ------------------------------------------------------------------SBCSSSSCCBCCEE
T ss_pred             ------------------------------------------------------------------cccCCCceEEeeeE
Confidence                                                                              11234689999999


Q ss_pred             eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099         257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF  336 (605)
Q Consensus       257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf  336 (605)
                      +.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||
T Consensus       365 l~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~Pf  444 (474)
T d1wnda_         365 LAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPH  444 (474)
T ss_dssp             EECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCB
T ss_pred             eecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988777889999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      ||+|+||+|+++|.+++++|++.|+++..
T Consensus       445 GG~k~SG~G~~~g~~gl~~~t~~k~v~i~  473 (474)
T d1wnda_         445 GGQKLSGYGKDMSLYGLEDYTVVRHVMVK  473 (474)
T ss_dssp             CCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred             ccccccccCccCHHHHHHHcCCEEEEEEe
Confidence            99999999999999999999999988753

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.5e-35  Score=313.36  Aligned_cols=190  Identities=24%  Similarity=0.208  Sum_probs=148.2

Q ss_pred             ccHHHHHHHHHhccccceeeecCCCC-cEEEcCCCCHHHHH---------hcccccccCeEEEecccHHHHHHHHHHHHh
Q psy1099         370 YTSHSIMAAAAASNLKRVSLELGGKS-PLVICADADVDMAY---------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAA  439 (605)
Q Consensus       370 ~~g~~v~~~~a~~~~~~~~lElgG~~-p~iV~~dad~~~a~---------~~~~c~a~~~v~v~~~~~~~~~~~l~~~~~  439 (605)
                      .+|..+.+.++. +++++++|+||+| |+||++|||++.|+         +++.|++++|+|||++++|+|+++|.+...
T Consensus       201 ~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~gq~C~a~~r~~V~~~i~d~f~~~l~~~~~  279 (414)
T d1o20a_         201 RGGYGLISFVRD-NATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELR  279 (414)
T ss_dssp             CSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTTSTTSEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHhhh-ccccceecccCCCCCeecccccchhhhhhHHHhhhhcCCcccccccccchhHHHHHHHHHHHhHHHH
Confidence            446677666665 7899999998876 57788999999986         455599999999999999999999999988


Q ss_pred             hcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccccceeeeeeee
Q psy1099         440 ARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI  519 (605)
Q Consensus       440 ~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~eE~FGPvl~i  519 (605)
                      +..++.+.++          .    ....                         .+.+.   ......++||+||||++|
T Consensus       280 ~~~~~~~~~~----------~----~~~~-------------------------~~~~~---~~~~~~~~~E~FgPvl~v  317 (414)
T d1o20a_         280 KHGVEVRGCE----------K----TREI-------------------------VPDVV---PATEDDWPTEYLDLIIAI  317 (414)
T ss_dssp             HTTCEEEECH----------H----HHHH-------------------------STTSE---ECCGGGTTCCCCSSEEEE
T ss_pred             HcCCccccch----------h----hhhh-------------------------cccce---ecccccCCceeeeeEEEE
Confidence            7655443321          1    0000                         00111   112245789999999999


Q ss_pred             EeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccCCC-------CcccccCCCCC--CChh--HHHHHH
Q psy1099         520 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGI--GREL--GKAALD  588 (605)
Q Consensus       520 ~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~~~-------~PfGG~~~SG~--G~~~--g~~~~~  588 (605)
                      ++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.+.+|.       .|||+.++||+  |+.|  |+++++
T Consensus       318 ~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~  397 (414)
T d1o20a_         318 KVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLR  397 (414)
T ss_dssp             EEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTG
T ss_pred             EEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHH
Confidence            999999999999999999999999999999999999999999954332       35666666665  3333  799999


Q ss_pred             HhhhceEEEEcCCC
Q psy1099         589 EYTELKTVTESPLR  602 (605)
Q Consensus       589 ~~~~~k~v~~~~~~  602 (605)
                      +||+.|+|+++..+
T Consensus       398 ~~t~~K~vv~~~~~  411 (414)
T d1o20a_         398 ELTTYKFVVLGEYH  411 (414)
T ss_dssp             GGEEEEEEEECSSC
T ss_pred             HhCeEEEEEECCCc
Confidence            99999999987654

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.6e-33  Score=300.90  Aligned_cols=251  Identities=36%  Similarity=0.607  Sum_probs=220.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+|+|++++....|                      
T Consensus       190 ~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~  269 (516)
T d1uzba_         190 FTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY  269 (516)
T ss_dssp             HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             ccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHH
Confidence            5789999999999999999999999999999999999999999999999765321100                      


Q ss_pred             -------------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099          60 -------------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEK   90 (605)
Q Consensus        60 -------------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~   90 (605)
                                                                       .|.|.++    +|++||+++||+|+++++++
T Consensus       270 ~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~----~ri~v~~~i~d~~~~~~~~~  345 (516)
T d1uzba_         270 EAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA----SRLILTQGAYEPVLERVLKR  345 (516)
T ss_dssp             HHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCccccc----CccccccccccchhhHHHHH
Confidence                                                             1356665    89999999999999999999


Q ss_pred             HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099          91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ  170 (605)
Q Consensus        91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~  170 (605)
                      ++++++| |.+.++.+||+++..+++++.++|+.+.+.|+.+ +||..                                
T Consensus       346 ~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~--------------------------------  391 (516)
T d1uzba_         346 AERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKR--------------------------------  391 (516)
T ss_dssp             HTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSB--------------------------------
T ss_pred             HHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCc--------------------------------
Confidence            9999999 6688999999999999998888888776666543 34432                                


Q ss_pred             EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099         171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY  250 (605)
Q Consensus       171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~  250 (605)
                                                                                                ...+|+
T Consensus       392 --------------------------------------------------------------------------~~~~g~  397 (516)
T d1uzba_         392 --------------------------------------------------------------------------LEGEGY  397 (516)
T ss_dssp             --------------------------------------------------------------------------CSSSSC
T ss_pred             --------------------------------------------------------------------------CCCCCc
Confidence                                                                                      234689


Q ss_pred             eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--C
Q psy1099         251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--Q  328 (605)
Q Consensus       251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~  328 (605)
                      |++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..  +
T Consensus       398 ~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~  477 (516)
T d1uzba_         398 FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITG  477 (516)
T ss_dssp             CBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred             eECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999964  3


Q ss_pred             CcCCCCCccccccCCCchHHh-HHhhhcccceeEEEe
Q psy1099         329 AVVPQAPFGGFKESGIGRELG-KAALDEYTELKTVTE  364 (605)
Q Consensus       329 ~~~~~~pfGG~~~SG~G~~~G-~~~~~~~~~~k~~t~  364 (605)
                      ...+.+||||+|.||+|++.| .+++++|++.|+++.
T Consensus       478 ~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~  514 (516)
T d1uzba_         478 ALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE  514 (516)
T ss_dssp             CCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred             CCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEE
Confidence            446789999999999998865 688999999999885

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=99.97  E-value=1.5e-31  Score=288.83  Aligned_cols=255  Identities=26%  Similarity=0.407  Sum_probs=223.6

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++++++.++|+|.++++++.|+++.+..++                      
T Consensus       172 ~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~~  251 (499)
T d1ky8a_         172 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK  251 (499)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             hhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEee
Confidence            5789999999999999999999999999999999999999999999998766432211                      


Q ss_pred             ----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCCC
Q psy1099          60 ----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP   99 (605)
Q Consensus        60 ----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~~   99 (605)
                                                              .|.|.++    +|++||+++||+|+++|++.++++++|+|
T Consensus       252 ~~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~----~~v~V~~~v~d~f~~~l~~~~~~l~~G~p  327 (499)
T d1ky8a_         252 VGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI----KLVLAERPVYGKLVEEVAKRLSSLRVGDP  327 (499)
T ss_dssp             HHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred             cccccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCccccccc----ccccccchhHHHHHHHHHHHHHhCccCCC
Confidence                                                    1356665    99999999999999999999999999999


Q ss_pred             CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCHH
Q psy1099         100 FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD  179 (605)
Q Consensus       100 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~  179 (605)
                      .+.++.+||+++..+.+++.+++++|+++|++++.||.....                                      
T Consensus       328 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~--------------------------------------  369 (499)
T d1ky8a_         328 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP--------------------------------------  369 (499)
T ss_dssp             TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEET--------------------------------------
T ss_pred             CCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccc--------------------------------------
Confidence            999999999999999999999999999999998888764210                                      


Q ss_pred             HHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEeec
Q psy1099         180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN  259 (605)
Q Consensus       180 ~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~  259 (605)
                                                                                         ....+..+++..+
T Consensus       370 -------------------------------------------------------------------~~~~~~~~~~~~~  382 (499)
T d1ky8a_         370 -------------------------------------------------------------------TYVQPTLVEAPAD  382 (499)
T ss_dssp             -------------------------------------------------------------------TEECCEEEECCHH
T ss_pred             -------------------------------------------------------------------ccccccccccccc
Confidence                                                                               0001112333456


Q ss_pred             cCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCCccc
Q psy1099         260 VTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAPFGG  338 (605)
Q Consensus       260 v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfGG  338 (605)
                      +.+|+++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+||||
T Consensus       383 ~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG  462 (499)
T d1ky8a_         383 RVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGG  462 (499)
T ss_dssp             HHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCC
T ss_pred             CCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccc
Confidence            7789999999999999999999999999999999999999999999999999999999999999997543 357899999


Q ss_pred             cccCCCchHHhHHhhhcccceeEEEec
Q psy1099         339 FKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       339 ~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      +|.||+|+++|.+++++|++.|+++.+
T Consensus       463 ~k~SG~G~~~g~~~~~~~~~~k~i~~~  489 (499)
T d1ky8a_         463 RKKSGVFREGIGYAVEAVTAYKTIVFN  489 (499)
T ss_dssp             EETTEESCBSTTTTHHHHEEEEEEEEE
T ss_pred             cccCcCCCCCHHHHHHHhhCEEEEEEc
Confidence            999999999999999999999998876

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.4e-31  Score=284.72  Aligned_cols=247  Identities=26%  Similarity=0.387  Sum_probs=210.9

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY-----------------------   58 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~-----------------------   58 (605)
                      +++++++||++||+||+|||+.+|+++.++++++++ ++|+++++++.|.+......                       
T Consensus       119 ~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~  197 (446)
T d1ad3a_         119 TIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-YMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAA  197 (446)
T ss_dssp             HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-HSCTTTEEECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHH
T ss_pred             ccccccccchhcccccccccceeccccccccccccc-cccccccccccccchhhhhhcccccCceEEECcHHHHHHHHHH
Confidence            578999999999999999999999999999999987 59999999998864321100                       


Q ss_pred             ----h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          59 ----W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        59 ----~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                          +                                    .|.|.++    +|++||+++|++|++++.+..+.+ +|+
T Consensus       198 aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~----~rv~v~~~i~~~f~~~l~~~~~~~-~g~  272 (446)
T d1ad3a_         198 AAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAP----DYILCDPSIQNQIVEKLKKSLKDF-YGE  272 (446)
T ss_dssp             HHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSC----CEEEECGGGHHHHHHHHHHHHHHH-HCS
T ss_pred             HHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccC----CccccccchhHHHHHhhhhhhhee-ecc
Confidence                0                                    1456666    999999999999999999888776 899


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      +.+.++.+||+++..+.+++..+++.+     +.                                              
T Consensus       273 ~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~----------------------------------------------  301 (446)
T d1ad3a_         273 DAKQSRDYGRIINDRHFQRVKGLIDNQ-----KV----------------------------------------------  301 (446)
T ss_dssp             CGGGCTTSCCCSCHHHHHHHHHTTTTS-----CE----------------------------------------------
T ss_pred             cccccccccchhhhhhhhhhhccccch-----hc----------------------------------------------
Confidence            999999999999988877665433221     11                                              


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                  ..|+. ....++|+.|||+.
T Consensus       302 ------------------------------------------------------------~~g~~-~~~~~~~~~Ptil~  320 (446)
T d1ad3a_         302 ------------------------------------------------------------AHGGT-WDQSSRYIAPTILV  320 (446)
T ss_dssp             ------------------------------------------------------------EECCC-EETTTTEECCEEEC
T ss_pred             ------------------------------------------------------------cccee-ecCCCCCcCCEEEE
Confidence                                                                        11111 12356889999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--CCcCCCCCc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--QAVVPQAPF  336 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~~~~~~~pf  336 (605)
                      +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..  +...+.+||
T Consensus       321 ~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~Pf  400 (446)
T d1ad3a_         321 DVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPF  400 (446)
T ss_dssp             SCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCC
T ss_pred             CCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCc
Confidence            999999999999999999999999999999999999999999999999999999999999999999964  445689999


Q ss_pred             cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099         337 GGFKESGIGRELGKAALDEYTELKTVTESP  366 (605)
Q Consensus       337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~  366 (605)
                      ||+|.||+|+++|.+++++|++.|+++..+
T Consensus       401 GG~k~SG~G~~~g~~~l~~ft~~k~v~~~~  430 (446)
T d1ad3a_         401 GGVGNSGMGAYHGKKSFETFSHRRSCLVKS  430 (446)
T ss_dssp             CCCGGGEECCCSTHHHHHHTEEEEEEEECC
T ss_pred             cccccceeccchHHHHHHHHhceeEEEEcc
Confidence            999999999999999999999999987754

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=99.95  E-value=2.8e-28  Score=262.12  Aligned_cols=250  Identities=32%  Similarity=0.474  Sum_probs=214.7

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW----------------------   59 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~----------------------   59 (605)
                      +++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+..+.|                      
T Consensus       159 ~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~  238 (474)
T d1euha_         159 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG  238 (474)
T ss_dssp             HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             hhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchh
Confidence            4678999999999999999999999999999999999999999999999744321100                      


Q ss_pred             -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099          60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD   98 (605)
Q Consensus        60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~   98 (605)
                                                               .|.|.++    ++++||+++|++|++.++.+...+++|+
T Consensus       239 ~~a~~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~----~~i~v~~~~~~~~~~~l~~~~~~~~~~~  314 (474)
T d1euha_         239 KMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAV----KRVLVMESVADELVEKIREKVLALTIGN  314 (474)
T ss_dssp             HHTTTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSE----EEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred             hhcccceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccc----cccchhhhhhhhhhHhhhhhhhhccccC
Confidence                                                     0345555    8999999999999999999999999998


Q ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099          99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  178 (605)
Q Consensus        99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~  178 (605)
                      +.+.. .++|.+.....+++...+..+...+...                                              
T Consensus       315 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------  347 (474)
T d1euha_         315 PEDDA-DITPLIDTKSADYVEGLINDANDKGATA----------------------------------------------  347 (474)
T ss_dssp             GGGTC-SBCCCSCHHHHHHHHHHHHHHHHTTCEE----------------------------------------------
T ss_pred             ccccc-ccccccchHHHHHHHHHHHhhhcccccc----------------------------------------------
Confidence            88755 4678887777777766666555444332                                              


Q ss_pred             HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099         179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS  258 (605)
Q Consensus       179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~  258 (605)
                                                                                  +..+   ...|+|++|||+.
T Consensus       348 ------------------------------------------------------------~~~~---~~~g~~~~Ptvl~  364 (474)
T d1euha_         348 ------------------------------------------------------------LTEI---KREGNLICPILFD  364 (474)
T ss_dssp             ------------------------------------------------------------CSCC---CEETTEECCEEEE
T ss_pred             ------------------------------------------------------------cccC---CCCCCCcCCEEEe
Confidence                                                                        1111   1257899999999


Q ss_pred             ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC-CcCCCCCcc
Q psy1099         259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-AVVPQAPFG  337 (605)
Q Consensus       259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~-~~~~~~pfG  337 (605)
                      .+++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+ ...+.+|||
T Consensus       365 ~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfG  444 (474)
T d1euha_         365 KVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFL  444 (474)
T ss_dssp             SCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBC
T ss_pred             cCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999754 446789999


Q ss_pred             ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         338 GFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |+|.||+|+++|.+++++|++.|+++.+
T Consensus       445 G~~~SG~G~~~g~~~l~~~~~~k~v~~~  472 (474)
T d1euha_         445 GAKKSGAGIQGVKYSIEAMTTVKSVVFD  472 (474)
T ss_dssp             CEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             ccccCccCccCHHHHHHHhCcEEEEEEe
Confidence            9999999999999999999999998865

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=3.8e-27  Score=247.91  Aligned_cols=200  Identities=15%  Similarity=0.069  Sum_probs=123.8

Q ss_pred             HHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hccc-----ccccCeEEEecccHHHHHHHHHHHHhhcccCC
Q psy1099         375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYCF-----VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGD  445 (605)
Q Consensus       375 v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~~~-----c~a~~~v~v~~~~~~~~~~~l~~~~~~~~~g~  445 (605)
                      +.+.+.....+|++.++||+||+||++|||+++|+    ++.|     |++.++++||+++++.|...+......   | 
T Consensus       211 lv~~v~~~~~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~~~g~C~a~e~llV~e~ia~~~~~~~~~~~~~---g-  286 (436)
T d1vlua_         211 LVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWWEVLENLTLEG---G-  286 (436)
T ss_dssp             HHHHHHHTCCSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC----CCCCEEEEECTTSTTHHHHHHHHHHHH---C-
T ss_pred             eeeeeeccccceEEEecCCccceeecccccHHHHHHHHHHHhccCCCccccccceeecHhhhhhhhhhHHHHHhC---C-
Confidence            33344442345999999999999999999999997    4433     999999999999998876544443332   1 


Q ss_pred             CCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccccceeeeeeeeEeeCCH
Q psy1099         446 PFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL  525 (605)
Q Consensus       446 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~eE~FGPvl~i~~~~~~  525 (605)
                           ..+.  .+..    +...........++         ..+....|++...   ...-|.+|.|+|+++|++++|+
T Consensus       287 -----v~l~--~~~~----~~~~~~~~~~~~~~---------~~~~~~~~~~~~~---~~~d~~~E~l~pvl~v~~v~~~  343 (436)
T d1vlua_         287 -----VTIH--ATKD----LKTAYFDKLNELGK---------LTEAIQCKTVDAD---EEQDFDKEFLSLDLAAKFVTST  343 (436)
T ss_dssp             -----CCBE--ECHH----HHHHHHHHHHHHTC---------CCHHHHTTBC----------------CCCCEEEECCSH
T ss_pred             -----cEEE--eCHH----HHHHhhhhhhhccc---------ccccccccccCCC---cccchhhhhhCcceeEEEECCH
Confidence                 0010  0111    11222221111111         0112222332221   1233789999999999999999


Q ss_pred             HHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-CCCCcccccCCCCCCCh----------hHHHHHHHhhhce
Q psy1099         526 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-VPQAPFGGFKESGIGRE----------LGKAALDEYTELK  594 (605)
Q Consensus       526 ~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-~~~~PfGG~~~SG~G~~----------~g~~~~~~~~~~k  594 (605)
                      ||||+++|+.++|||++|||+|.+.+++|++++++|.+. |.+.-|-.-.+-|+|.+          .|+.|++.+|..|
T Consensus       344 eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k  423 (436)
T d1vlua_         344 ESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQ  423 (436)
T ss_dssp             HHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEE
T ss_pred             HHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEE
Confidence            999999999999999999999999999999999999954 54444532223333333          6888999999999


Q ss_pred             EEEEcCC
Q psy1099         595 TVTESPL  601 (605)
Q Consensus       595 ~v~~~~~  601 (605)
                      +++....
T Consensus       424 ~~~~g~g  430 (436)
T d1vlua_         424 YQIRGDG  430 (436)
T ss_dssp             EEEECSS
T ss_pred             EEEECCC
Confidence            9987543

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=99.82  E-value=1.8e-20  Score=201.22  Aligned_cols=239  Identities=19%  Similarity=0.267  Sum_probs=172.1

Q ss_pred             ccchhHHHhhcCcEEEccCCCCchhHHHHHHH----HHHcCCCCccEEEecCCCCCChhhh-------------------
Q psy1099           3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAAL----TQQAGFPDGVISVLPGYGPMSAPYW-------------------   59 (605)
Q Consensus         3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~l----l~~aGlP~gvv~vv~g~~~~~~~~~-------------------   59 (605)
                      ++++++||++||+||+||||.+|+++.++.++    ++++|+|+|++|+|+|+++++...|                   
T Consensus       152 ~~~~a~ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~  231 (504)
T d1ez0a_         152 GGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGR  231 (504)
T ss_dssp             SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred             hHHHHHHHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHH
Confidence            45899999999999999999999998776555    5566999999999999765432110                   


Q ss_pred             --------------------------------------------------hhhcCCcccccceeEeccccHH-HHHHHHH
Q psy1099          60 --------------------------------------------------RKSCLSPLAYRSRTYVQEDIYD-TFVKKAV   88 (605)
Q Consensus        60 --------------------------------------------------~~~~~~~~~~~~~~~v~~~i~~-~~~~~l~   88 (605)
                                                                        .|.|.++    +|++|+++.++ .|++.+.
T Consensus       232 ~i~~~aa~~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~----~rv~v~~~~~~~~~~~~~~  307 (504)
T d1ez0a_         232 ALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKP----GVVFALNTPETQAFIETAQ  307 (504)
T ss_dssp             HHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCC----CEEEEESSHHHHHHHHHHH
T ss_pred             HHHhhhhcccccccccccccccccccccccccHHHHhhhhccccchhhccCcccccc----ccccchhhhhHHHHhhhhh
Confidence                                                              0345555    78888777654 4555555


Q ss_pred             HHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099          89 EKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP  168 (605)
Q Consensus        89 ~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp  168 (605)
                      +..+.      .++.+.+||+++..+.+++   ++.+.+.|..+..||.                               
T Consensus       308 ~~~~~------~~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~-------------------------------  347 (504)
T d1ez0a_         308 SLIRQ------QSPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQA-------------------------------  347 (504)
T ss_dssp             HHHHH------CCCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCC-------------------------------
T ss_pred             hhhhh------cccccccccchhhhhhhhh---hhhhhhhhhhcccccc-------------------------------
Confidence            44332      2346778888776655443   3344444444433332                               


Q ss_pred             eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099         169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK  248 (605)
Q Consensus       169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~  248 (605)
                                                                                                 .    
T Consensus       348 ---------------------------------------------------------------------------~----  348 (504)
T d1ez0a_         348 ---------------------------------------------------------------------------E----  348 (504)
T ss_dssp             ---------------------------------------------------------------------------C----
T ss_pred             ---------------------------------------------------------------------------c----
Confidence                                                                                       1    


Q ss_pred             CeeeeeeE---eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCC--hHHHHHHHHHhh--ccc
Q psy1099         249 GYFIEPTV---FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN--IDTANTFAHAIN--AGS  321 (605)
Q Consensus       249 g~~~~Ptv---l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d--~~~~~~~~~~~~--~g~  321 (605)
                      +.+..|++   ..++..++++++||+||||++|++|+|+||||+++|+++|||++||||+|  ..++.+++++|+  +|+
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~  428 (504)
T d1ez0a_         349 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGR  428 (504)
T ss_dssp             TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEE
T ss_pred             ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccE
Confidence            11112222   23455678899999999999999999999999999999999999999964  558899999997  899


Q ss_pred             EEEeccC--Cc-----CCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099         322 VWINCYQ--AV-----VPQAPFGGFKESGIGRELGKAALDEYTELKTVTES  365 (605)
Q Consensus       322 v~iN~~~--~~-----~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s  365 (605)
                      |+||..+  ..     ..+.||||.+.||.+ ..|..+++.|.+.+++..-
T Consensus       429 v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~~q~~  478 (504)
T d1ez0a_         429 LVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVAYQAL  478 (504)
T ss_dssp             EEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEEEESC
T ss_pred             EEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhhhccC
Confidence            9999632  11     234588999999955 4688899999888776554

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.81  E-value=3.9e-21  Score=202.07  Aligned_cols=101  Identities=28%  Similarity=0.310  Sum_probs=86.6

Q ss_pred             hhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCccccccCCC
Q psy1099         265 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI  344 (605)
Q Consensus       265 ~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~  344 (605)
                      ..++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++|++++++|+|+||.++......|||+.+.+|+
T Consensus       304 ~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~  383 (414)
T d1o20a_         304 DDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGI  383 (414)
T ss_dssp             GGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCE
T ss_pred             ccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCCCCCCCCCCCceec
Confidence            35789999999999999999999999999999999999999999999999999999999997665445556666566665


Q ss_pred             ch--H--HhHHhhhcccceeEEEec
Q psy1099         345 GR--E--LGKAALDEYTELKTVTES  365 (605)
Q Consensus       345 G~--~--~G~~~~~~~~~~k~~t~s  365 (605)
                      +.  .  +|.+++++|++.|+++..
T Consensus       384 ~~~~~~~~G~~gl~~~t~~K~vv~~  408 (414)
T d1o20a_         384 STQRFHARGPVGLRELTTYKFVVLG  408 (414)
T ss_dssp             ECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred             cCCCCCCCchhHHHHhCeEEEEEEC
Confidence            32  2  278899999999998765

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=4.8e-15  Score=154.86  Aligned_cols=272  Identities=15%  Similarity=0.119  Sum_probs=149.8

Q ss_pred             cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH--------HcCCCCccEEEecCCCCCChhhhhhhcCCccccccee
Q psy1099           2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ--------QAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRT   73 (605)
Q Consensus         2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~--------~aGlP~gvv~vv~g~~~~~~~~~~~~~~~~~~~~~~~   73 (605)
                      .++++++||++||+||+||++.++.|+..++++++        ++|+|++++|++++..+....+..+..++.+.|++. 
T Consensus       130 t~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg-  208 (436)
T d1vlua_         130 IANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGS-  208 (436)
T ss_dssp             HHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESC-
T ss_pred             hhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecC-
Confidence            35678999999999999999999999998887765        559999999999876544433333333332222221 


Q ss_pred             EeccccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCc-EE--EeCCcccCCCCccccceE
Q psy1099          74 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG-KL--EAGGKRKGDKGYFIEPTV  150 (605)
Q Consensus        74 ~v~~~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~-~~--~~gG~~~~~~~~~v~P~v  150 (605)
                             .                                      .+++.+.+.+. .+  ..||.+         |++
T Consensus       209 -------~--------------------------------------~lv~~v~~~~~~pvi~~~~G~~---------~~~  234 (436)
T d1vlua_         209 -------N--------------------------------------ALVRKIKDTTKIPVLGHADGIC---------SIY  234 (436)
T ss_dssp             -------H--------------------------------------HHHHHHHHTCCSCBTTBCSCCE---------EEE
T ss_pred             -------C--------------------------------------ceeeeeeccccceEEEecCCcc---------cee
Confidence                   1                                      22333333322 22  345554         777


Q ss_pred             eccCCCchhhhcccccc-----cee------EEEecCCHHHH---HHHHhcccCcceeeeeccchhhHHHHHHHcccCcc
Q psy1099         151 FSNVTDDFKIAREEIFG-----PVQ------TIIKFKTLDEV---IERANDTKYGLASGIVTTNIDTANTFAHAINAGSV  216 (605)
Q Consensus       151 v~~~~~~~~~~~~~ifg-----p~~------~~v~~~~~~~~---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v  216 (605)
                      |+++. |++.+.+.++.     |.+      .+++++..+.+   +..+.+....+.+     +.+..            
T Consensus       235 Vd~~A-Dl~~A~~~i~~ak~~~~g~C~a~e~llV~e~ia~~~~~~~~~~~~~gv~l~~-----~~~~~------------  296 (436)
T d1vlua_         235 LDEDA-DLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWWEVLENLTLEGGVTIHA-----TKDLK------------  296 (436)
T ss_dssp             ECTTC-CHHHHHHHHHHTTCC----CCCCEEEEECTTSTTHHHHHHHHHHHHCCCBEE-----CHHHH------------
T ss_pred             ecccc-cHHHHHHHHHHHhccCCCccccccceeecHhhhhhhhhhHHHHHhCCcEEEe-----CHHHH------------
Confidence            77644 55545555432     332      34555444433   2222222111110     01000            


Q ss_pred             chHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCc
Q psy1099         217 DAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY  296 (605)
Q Consensus       217 ~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~  296 (605)
                           ......+..    .      +   ........|++....   ..-|.+|.|+|+|+|++|+|+||||+++|+++|
T Consensus       297 -----~~~~~~~~~----~------~---~~~~~~~~~~~~~~~---~~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~  355 (436)
T d1vlua_         297 -----TAYFDKLNE----L------G---KLTEAIQCKTVDADE---EQDFDKEFLSLDLAAKFVTSTESAIQHINTHSS  355 (436)
T ss_dssp             -----HHHHHHHHH----H------T---CCCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCS
T ss_pred             -----HHhhhhhhh----c------c---cccccccccccCCCc---ccchhhhhhCcceeEEEECCHHHHHHHHHHhCC
Confidence                 000000000    0      0   001111222322222   223789999999999999999999999999999


Q ss_pred             ceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCccccccCCC----chHHhHHhhhcccceeEEEecCC
Q psy1099         297 GLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI----GRELGKAALDEYTELKTVTESPL  367 (605)
Q Consensus       297 glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~----G~~~G~~~~~~~~~~k~~t~s~~  367 (605)
                      ||+++|||+|.+.+++|.+++++|.|+||.++.+..+.+||--..-|+    ....|+.+++..+..|++....|
T Consensus       356 ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g  430 (436)
T d1vlua_         356 RHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDG  430 (436)
T ss_dssp             SCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECSS
T ss_pred             CCceEEEECCHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECCC
Confidence            999999999999999999999999999998887776667763223333    23467888888888888765543