Psyllid ID: psy11015

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Protein Sequence
MVESDPLKNFLKDLIRTHNMPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIRSK
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEcccccccEEEEEcccccccEEEEEEcccccEEEEEcccccccccEEEccccccccEEEEEEEEcccccEEEEEEcccccEEEEccccccEEEEcccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEcccccccEEEEEEccccccEEEccccEEEEcccccEEEEEEcccccEEEEccccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccccHccccHHHHccccccccccccccccccEEEcccccEEEEEEccccccccEcccccccEEEEcccccEEEEEEcccccEEEEEEccccEEEcccccEEEEEccccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEccccccEEEEEEEEEEcccccccEEEEEEcccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEccEEEEEccccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEccccccccc
Coil and Loop (DISEMBL)
MVESDPLKNFLKDLIrthnmpqsdtmsqkstkhkrtasgklsnlgdqdLSMLRTHlnseyddvvlpssvkfkLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESiinekypecndmecVTNMNknfnkqkvlasnpsaqklkttnklkVQTSKIVSSFKTSLLSCYKIrsfsghrdgvwdvavrpgqpvlgsasadRTVRLWStqtgkcvlqysghsgsvnsvrflpnkdlvlsasgdksVHIWQAVINWEClvsnndndsdldeskepdessitlrtPVKELLGHSNVVIaadwlsdgeQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAagrtggpirasPLLLAIRSK
Flexible Loop (DISEMBL)
MVESDPLKNFLKDlirthnmpqsdtmsqkstkhkrtasgklsnlgdqDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLasnpsaqklkttnklkvqtskivssfktslLSCYKIRSFSGHRDGVWDVAVRPGQpvlgsasadrtvRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRaaagrtggpirasplllairsk
Low Complexity Region (SEG)
MVESDPLKNFLKDLIRTHNMPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFellylenlnlQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVsnndndsdldesKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIRSK
Disordered region (IsUnstruct)
*****************************************************THLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMN*************************VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS************************VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE****************************
Disordered Region (DISOPRED)
*******KNFL********************************LGDQDLSML*************PSSVKFKLNSLFSQIEREFELLYLENLNLQDK***************EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR**
Disordered Region (DISEMBL)
MVESDPLKNFLKDLIRTHNMP*****************GKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDN*************SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIRSK
Disordered Region (DISPRO)
****DPLKNFLKDLIRTHNMPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASP********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVESDPLKNFLKDLIRTHNMPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIRSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	360	2.2.26 [Sep-21-2011]
Q8CBE3	496	WD repeat-containing prot	yes	N/A	0.719	0.522	0.460	1e-58
A4IIX9	494	WD repeat-containing prot	yes	N/A	0.788	0.574	0.439	2e-58
Q5R650	495	WD repeat-containing prot	yes	N/A	0.8	0.581	0.436	2e-58
Q9Y2I8	494	WD repeat-containing prot	yes	N/A	0.797	0.580	0.427	4e-58
Q6DDF0	495	WD repeat-containing prot	N/A	N/A	0.786	0.571	0.439	8e-58
B3S4I5	409	Lissencephaly-1 homolog O	N/A	N/A	0.477	0.420	0.293	2e-15
Q00808	1356	Vegetative incompatibilit	yes	N/A	0.588	0.156	0.257	3e-15
Q8YRI1	1526	Uncharacterized WD repeat	no	N/A	0.630	0.148	0.272	5e-15
A0CH87	403	Lissencephaly-1 homolog 2	N/A	N/A	0.377	0.337	0.292	5e-14
Q8YTC2	1258	Uncharacterized WD repeat	no	N/A	0.608	0.174	0.281	6e-14

>sp|Q8CBE3|WDR37_MOUSE WD repeat-containing protein 37 OS=Mus musculus GN=Wdr37 PE=2 SV=1

 Score =  226 bits (577), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/293 (46%), Positives = 176/293 (60%), Gaps = 34/293 (11%)

Query: 59  EYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPEC 118
           E  D  LPSSV+  L  LF QIEREFE LY+ENL L+ +ID L E+L  E          
Sbjct: 44  EGQDSKLPSSVRSTLLELFGQIEREFENLYIENLELRREIDTLNERLAGEG--------- 94

Query: 119 NDMECVTNMNKNFNKQKVLASNPSAQ---KLKTTNKLKVQTSKIVSSFKT--SLLSCYKI 173
              + +     +  + K  AS+ ++Q   KLKTT   K  TSKIVSSFKT  S   C  +
Sbjct: 95  ---QAIDGAELSKGQLKTKASHSTSQLSQKLKTT--YKASTSKIVSSFKTTTSRAICQLV 149

Query: 174 RSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           + + GHRDG+WDV+V   QP VLG+ASAD T  LWS +TGKC+++Y+GH GSVNS++F P
Sbjct: 150 KEYIGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHP 209

Query: 233 NKDLVLSASGDKSVHIWQAVINWECL-----VSNNDNDSDLDESKEPDESSI-------- 279
           ++ L L+ASGD++ HIW+ V+           S   +  D  E  + DE  I        
Sbjct: 210 SEQLALTASGDQTAHIWRYVVQLPTPQPVADTSQQISGEDEIECSDKDEPDIDGDVSSDC 269

Query: 280 -TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
            T+R P+  L  H  VVIAADWL  G+QV+TASWDR ANL+DVET  ++ SLT
Sbjct: 270 PTVRVPLTSLKSHQGVVIAADWLVGGKQVVTASWDRTANLYDVETSELVHSLT 322

Mus musculus (taxid: 10090)

>sp|A4IIX9|WDR37_XENTR WD repeat-containing protein 37 OS=Xenopus tropicalis GN=wdr37 PE=2 SV=1

 Score =  226 bits (577), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/328 (43%), Positives = 192/328 (58%), Gaps = 44/328 (13%)

Query: 29  KSTKHKRTA---SGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFE 85
           + TK KR +   S K +N  +QD   L+  +  E  D  LPSSV+  L  LF QIEREFE
Sbjct: 12  RQTKQKRKSHSLSIKRTNSSEQDRPGLQREM-LEGQDSKLPSSVRNTLLELFGQIEREFE 70

Query: 86  LLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQ- 144
            LYLENL L+ +ID L ++L  E             + +     +  + K  AS+ ++Q 
Sbjct: 71  NLYLENLELRREIDTLNDRLAVEG------------QAIDGAELSKGQMKTKASHSTSQL 118

Query: 145 --KLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGSAS 199
             KLKTT   K  TSKIVSSFKT  S   C  ++ + GHRDG+WDV+V   QPV LG+AS
Sbjct: 119 SQKLKTT--YKASTSKIVSSFKTTTSRAICQLVKDYVGHRDGLWDVSVTRTQPVVLGTAS 176

Query: 200 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW---- 255
           AD T  LWS +TGKC+++Y GH+GSVNS++F P + + L+ASGD++ HIW+ ++      
Sbjct: 177 ADHTALLWSIETGKCLIKYVGHAGSVNSIKFHPTEQIALTASGDQTAHIWRYMVQLPTPQ 236

Query: 256 -----------ECLVSNND-NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD 303
                      E   S+ D ND D D S +      T+R P+  L  H  VVIAADWL  
Sbjct: 237 PTADTSISGEEEVDFSDKDENDGDGDASSD----CPTVRVPLTALKSHQGVVIAADWLVG 292

Query: 304 GEQVITASWDRVANLFDVETGTILQSLT 331
           G+Q +TASWDR ANL+DVET  ++ SLT
Sbjct: 293 GKQAVTASWDRTANLYDVETSELVHSLT 320

Xenopus tropicalis (taxid: 8364)

>sp|Q5R650|WDR37_PONAB WD repeat-containing protein 37 OS=Pongo abelii GN=WDR37 PE=2 SV=1

 Score =  226 bits (576), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/325 (43%), Positives = 193/325 (59%), Gaps = 37/325 (11%)

Query: 29  KSTKHKRTA---SGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFE 85
           + TK KR +   S + +N  +Q+ + L   +  E  D  LPSSV+  L  LF QIEREFE
Sbjct: 12  RQTKQKRKSHSLSIRRTNSSEQERTGLPRDM-LEGQDSKLPSSVRSTLLELFGQIEREFE 70

Query: 86  LLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQ- 144
            LY+ENL L+ +ID L E+L  E             + +     +  + K  AS+ ++Q 
Sbjct: 71  NLYIENLELRREIDTLNERLAAEG------------QAIDGAELSKGQLKTKASHSTSQL 118

Query: 145 --KLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGSAS 199
             KLKTT   K  TSKIVSSFKT  S  +C  ++ + GHRDG+WDV+V   QPV LG+AS
Sbjct: 119 SQKLKTT--YKASTSKIVSSFKTTTSRAACQLVKEYIGHRDGIWDVSVAKTQPVVLGTAS 176

Query: 200 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC-- 257
           AD T  LWS +TGKC+++Y+GH GSVNS++F P++ L L+ASGD++ HIW+  +      
Sbjct: 177 ADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAVQLPTPQ 236

Query: 258 LVSNNDNDSDLDESK-----EPD------ESSITLRTPVKELLGHSNVVIAADWLSDGEQ 306
            V++    S  DE +     EPD          T+R P+  L  H  VVIAADWL  G+Q
Sbjct: 237 PVADTSQISGEDEVECSDKDEPDLDGDVSSDCPTIRVPLTSLKSHQGVVIAADWLVGGKQ 296

Query: 307 VITASWDRVANLFDVETGTILQSLT 331
            +TASWDR ANL+DVET  ++ SLT
Sbjct: 297 AVTASWDRTANLYDVETSELVHSLT 321

Pongo abelii (taxid: 9601)

>sp|Q9Y2I8|WDR37_HUMAN WD repeat-containing protein 37 OS=Homo sapiens GN=WDR37 PE=2 SV=2

 Score =  225 bits (574), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/325 (42%), Positives = 193/325 (59%), Gaps = 38/325 (11%)

Query: 29  KSTKHKRTA---SGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFE 85
           + TK KR +   S + +N  +Q+ + L   +  E  D  LPSSV+  L  LF QIEREFE
Sbjct: 12  RQTKQKRKSHSLSIRRTNSSEQERTGLPRDM-LEGQDSKLPSSVRSTLLELFGQIEREFE 70

Query: 86  LLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQ- 144
            LY+ENL L+ +ID L E+L  E             + +     +  + K  AS+ ++Q 
Sbjct: 71  NLYIENLELRREIDTLNERLAAEG------------QAIDGAELSKGQLKTKASHSTSQL 118

Query: 145 --KLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGSAS 199
             KLKTT   K  TSKIVSSFKT  S  +C  ++ + GHRDG+WDV+V   QPV LG+AS
Sbjct: 119 SQKLKTT--YKASTSKIVSSFKTTTSRAACQLVKEYIGHRDGIWDVSVAKTQPVVLGTAS 176

Query: 200 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW---- 255
           AD T  LWS +TGKC+++Y+GH GSVNS++F P++ L L+ASGD++ HIW+  +      
Sbjct: 177 ADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAVQLPTPQ 236

Query: 256 ---ECLVSNNDNDSDLDESKEPD------ESSITLRTPVKELLGHSNVVIAADWLSDGEQ 306
              +  +S  D + +  +  EPD          T+R P+  L  H  VVIA+DWL  G+Q
Sbjct: 237 PVADTSISGED-EVECSDKDEPDLDGDVSSDCPTIRVPLTSLKSHQGVVIASDWLVGGKQ 295

Query: 307 VITASWDRVANLFDVETGTILQSLT 331
            +TASWDR ANL+DVET  ++ SLT
Sbjct: 296 AVTASWDRTANLYDVETSELVHSLT 320

Homo sapiens (taxid: 9606)

>sp|Q6DDF0|WDR37_XENLA WD repeat-containing protein 37 OS=Xenopus laevis GN=wdr37 PE=2 SV=1

 Score =  224 bits (571), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 192/330 (58%), Gaps = 47/330 (14%)

Query: 29  KSTKHKRTA---SGKLSNLGDQD-LSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREF 84
           + TK KR +   S K +N  +QD L + R  L  E  D  LP SV+  L  LF QIEREF
Sbjct: 12  RQTKQKRKSHSLSIKRTNSSEQDRLGLQRDML--EGQDSKLPPSVRNTLLELFGQIEREF 69

Query: 85  ELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQ 144
           E LYLENL L+ +ID L ++L  E             + +     +  + K  AS+ ++Q
Sbjct: 70  ENLYLENLELRREIDTLNDRLAVEG------------QAIDGAELSKGQMKTKASHSTSQ 117

Query: 145 ---KLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGSA 198
              KLKTT   K  TSKIVSSFKT  S   C  ++ + GHRDG+WDV+V   QPV LG+A
Sbjct: 118 LSQKLKTT--YKASTSKIVSSFKTTTSRAICQLVKDYVGHRDGLWDVSVTRTQPVVLGTA 175

Query: 199 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW--- 255
           SAD T  LWS +TGKC+++Y GH+GSVNS++F P + + L+ASGD++ HIW+ ++     
Sbjct: 176 SADHTALLWSIETGKCLIKYVGHAGSVNSIKFHPTEQIALTASGDQTAHIWRYMVQLPTP 235

Query: 256 -------------ECLVSNND-NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL 301
                        E   S+ D ND D D S +      T+R P+  L  H  VVIAADWL
Sbjct: 236 QPMADTSQISGEEEVDFSDKDENDGDGDASSD----CPTVRVPLTALKSHQGVVIAADWL 291

Query: 302 SDGEQVITASWDRVANLFDVETGTILQSLT 331
             G+Q +TASWDR ANL+DVET  ++ SLT
Sbjct: 292 VGGKQAVTASWDRTANLYDVETSELVHSLT 321

Xenopus laevis (taxid: 8355)

>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 36/208 (17%)

Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
           R+  GH D V D+A      +L S+SAD TV++W  QT +C +   GH  +V+SV FLP+
Sbjct: 143 RTLRGHTDSVQDLAFDSSGKLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPS 202

Query: 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDN-----------DSDLDESKEPDES----S 278
            D +LS+S DK++ +W+    + C+ +   +           D  L  S   D++    S
Sbjct: 203 GDFLLSSSRDKTIKMWEVATGY-CVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWS 261

Query: 279 ITLRTPVKELLGHSNVVIAADWLSD--------------------GEQVITASWDRVANL 318
           ++ +   +EL GH +VV    W  +                    G  + + S DRV  +
Sbjct: 262 LSSKECKEELRGHEHVVECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKI 321

Query: 319 FDVETGTILQSLTEPGEAIRAAAGRTGG 346
           +DV T   L SL      +R  A   GG
Sbjct: 322 WDVTTAVCLFSLVGHDNWVRGLAFHAGG 349

Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.

Trichoplax adhaerens (taxid: 10228)

>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1

 Score = 83.2 bits (204), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 21/233 (9%)

Query: 123  CVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDG 182
            C   +  + +    +A +P  Q++ + +       K +  + T+  +C   ++  GH   
Sbjct: 959  CTQTLEGHGSSVLSVAFSPDGQRVASGSG-----DKTIKIWDTASGTC--TQTLEGHGGS 1011

Query: 183  VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG 242
            VW VA  P    + S S D+T+++W T +G C     GH G V SV F P+   V S S 
Sbjct: 1012 VWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSD 1071

Query: 243  DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSI-------TLR-------TPVKEL 288
            D ++ IW AV            DS    +  PD   +       T++       T  + L
Sbjct: 1072 DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL 1131

Query: 289  LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
             GH   V +  +  DG++V + S D    ++D  +GT  Q+L   G  +++ A
Sbjct: 1132 EGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVA 1184

Responsible for vegetative incompatibility through specific interactions with different alleles of the unlinked gene, het-c.

Podospora anserina (taxid: 5145)

>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1

 Score = 82.4 bits (202), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 23/250 (9%)

Query: 117  ECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSF 176
            E N  +C+     + +    +  NP    L + +     + K V  +  S   C  + +F
Sbjct: 1228 EINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGS-----SDKTVRLWDISSSKC--LHTF 1280

Query: 177  SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 236
             GH + V  VA  P   +L S S D+TVRLW   + KC+  + GH+  V+SV F P+  +
Sbjct: 1281 QGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTM 1340

Query: 237  VLSASGDKSVHIWQAVINWECLVS--NNDN---------DSDLDESKEPDES----SITL 281
            + S S D++V +W ++ + ECL +   + N         D  +  S   D++    SI+ 
Sbjct: 1341 LASGSDDQTVRLW-SISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISS 1399

Query: 282  RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
               +  L GH+N V +  +  DG  + + S D+   L+++ +G  L +L     ++R+ A
Sbjct: 1400 GKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVA 1459

Query: 342  GRTGGPIRAS 351
              + G I AS
Sbjct: 1460 FSSDGLILAS 1469

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|A0CH87|LIS12_PARTE Lissencephaly-1 homolog 2 OS=Paramecium tetraurelia GN=GSPATT00007594001 PE=3 SV=1

 Score = 79.0 bits (193), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 28/164 (17%)

Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
           GHR GV  VA  P   +LGSAS D +++LW  ++G       GH+ +VN + F P    +
Sbjct: 103 GHRAGVNCVAFHPQYQILGSASDDGSIKLWDYESGHFEKTLKGHTSNVNCLAFDPTGKYI 162

Query: 238 LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA 297
            SAS D S+ +W+                            +   T VK L+GH + V  
Sbjct: 163 CSASSDLSIKLWE----------------------------LKNHTCVKTLIGHEHSVST 194

Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
             +   G+ +++AS D+   L++V+TG   ++ +E  E +R A 
Sbjct: 195 VQFSDHGDFILSASRDKSIKLWEVQTGFCKKTFSEHQEWVRCAV 238

Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.

Paramecium tetraurelia (taxid: 5888)

>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1

 Score = 78.6 bits (192), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 37/256 (14%)

Query: 118  CNDMECVTNMNKNFNKQKVLASNPSAQKL------KTTNKLKVQTSKIVSSFKTSLLSCY 171
            C   +C+     N +    +A +P  Q L      KT      QT K +SS +       
Sbjct: 923  CRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLE------- 975

Query: 172  KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
                  GH D ++ +A  P    L SAS D +VRLW+  TG+C      H+  V +V F 
Sbjct: 976  ------GHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFH 1029

Query: 232  PNKDLVLSASGDKSVHIWQAVINWECLVSNNDN-----------DSDLDESKEPDES--- 277
            P   ++ + S D +V +W  +   +CL + +++           D  L  S   D+S   
Sbjct: 1030 PQGKIIATGSADCTVKLWN-ISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRL 1088

Query: 278  --SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE 335
                T R  V  L GHSN V +A +  +GE + T S D+   ++D + G  L++LT    
Sbjct: 1089 WDCCTGRC-VGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTN 1147

Query: 336  AIRAAAGRTGGPIRAS 351
             +   A    G I AS
Sbjct: 1148 WVFDIAFSPDGKILAS 1163

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	360
307183988	509	WD repeat-containing protein 37 [Campono	0.830	0.587	0.447	4e-76
383863272	507	PREDICTED: WD repeat-containing protein	0.772	0.548	0.505	2e-75
307199085	512	WD repeat-containing protein 37 [Harpegn	0.733	0.515	0.483	2e-74
357621111	466	hypothetical protein KGM_07136 [Danaus p	0.752	0.581	0.506	4e-74
322802316	471	hypothetical protein SINV_12250 [Solenop	0.705	0.539	0.477	5e-74
242018602	490	WD-repeat protein, putative [Pediculus h	0.755	0.555	0.506	7e-74
380021536	510	PREDICTED: WD repeat-containing protein	0.758	0.535	0.5	3e-73
328787768	510	PREDICTED: WD repeat-containing protein	0.783	0.552	0.484	4e-73
340724308	514	PREDICTED: WD repeat-containing protein	0.783	0.548	0.484	4e-73
350420808	515	PREDICTED: WD repeat-containing protein	0.783	0.547	0.478	5e-73

>gi|307183988|gb|EFN70559.1| WD repeat-containing protein 37 [Camponotus floridanus]

 Score =  291 bits (744), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 155/346 (44%), Positives = 221/346 (63%), Gaps = 47/346 (13%)

Query: 21  PQSDTMSQKSTKHKRTASGKLSNLGDQDL-------------SMLRTHLNSEYDDVVLPS 67
           P + T ++ S K KR +  ++ +  D +L             ++      SE +D  +P 
Sbjct: 5   PSATTGNKSSGKAKRISIPRVQSSTDTELQSQQSGSTPLQPTALHYVSFRSELEDSPIPP 64

Query: 68  SVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEK----------YPE 117
           +++ +L  LF QIE+EFE+LY ENL LQ+KID+L +KL+RE   + +          YPE
Sbjct: 65  TLRCRLYDLFQQIEKEFEMLYTENLGLQEKIDILNDKLERECYGSGERSLPPGDLTDYPE 124

Query: 118 CNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFS 177
                      KN +KQK + +N SAQK+KT++KLK QTSKIVSSFKT  ++C   R + 
Sbjct: 125 ----------TKNLSKQKSMGAN-SAQKIKTSHKLKAQTSKIVSSFKTPSMTCTMQREYV 173

Query: 178 GHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 236
           GHRDGVW+++V R GQP++ +ASAD T R+W+  + +C+LQY GHSGSVNSVRF PN++L
Sbjct: 174 GHRDGVWEISVSRSGQPIIATASADHTARIWAIDSSRCLLQYIGHSGSVNSVRFHPNREL 233

Query: 237 VLSASGDKSVHIWQAVINW----------ECLVSNNDNDS--DLDESKEPDESSITLRTP 284
            LSASGD S H+WQA ++W          E  V++++  +  +L  + +  E   TLRTP
Sbjct: 234 ALSASGDGSAHVWQAAVDWDMPKRVPSLEELPVASSERSATNNLISTNDEQEDPPTLRTP 293

Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
           ++ELLGHS+VV+AADWL   EQ++TASWDR ANL+D ETG I+ +L
Sbjct: 294 IRELLGHSSVVMAADWLCGAEQLVTASWDRTANLYDTETGEIIHTL 339

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863272|ref|XP_003707105.1| PREDICTED: WD repeat-containing protein 37-like [Megachile rotundata]

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 150/297 (50%), Positives = 199/297 (67%), Gaps = 19/297 (6%)

Query: 47  QDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 106
           Q  +  RT L    DD VLP +++ +L  LF QIE+EFE LY ENL LQ+KID L E+LD
Sbjct: 47  QHYAAFRTDL----DDSVLPPALRCRLFDLFQQIEKEFEALYAENLGLQEKIDALNERLD 102

Query: 107 RESI-INEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 165
           RE     E+     D+    +  K+F+KQK +A N + +   T+NKLK QTSKIVSSFKT
Sbjct: 103 RECYGSGERSLPIGDVADFPD-TKSFSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKT 161

Query: 166 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 224
             ++C   R +SGHRDGVW+V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGS
Sbjct: 162 PTMTCSMQREYSGHRDGVWEVSVGRSGQ-IIATASADHSARVWAVDSGRCLLQYIGHSGS 220

Query: 225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNND-----------NDSDLDESKE 273
           VNSVRF P K+L L++SGD S H+WQA ++W+     N            N S++    E
Sbjct: 221 VNSVRFHPTKELALTSSGDNSAHVWQAAVDWDFPKRQNSSEELSGLNTDRNPSNVITVNE 280

Query: 274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
             +   TLRTPV+ELLGH+ VV+AADWL D EQ++TASWDR ANL+DVETG I+ +L
Sbjct: 281 EQDEPPTLRTPVRELLGHTGVVMAADWLPDAEQIVTASWDRTANLYDVETGEIIHTL 337

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307199085|gb|EFN79795.1| WD repeat-containing protein 37 [Harpegnathos saltator]

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 144/298 (48%), Positives = 197/298 (66%), Gaps = 34/298 (11%)

Query: 56  LNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEK- 114
             SE +D  +P +++ +L  LF QIE+EFE+LY ENL LQ+KID+L ++L+RE   + + 
Sbjct: 56  FRSELEDSPIPPALRCRLYDLFQQIEKEFEMLYTENLGLQEKIDILNDRLERECYGSGER 115

Query: 115 ---------YPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 165
                    YPE           KN +KQK + +N SAQK+K ++KLK QTSKIVSSFKT
Sbjct: 116 SLPPGDLMDYPE----------TKNLSKQKSMGAN-SAQKIKASHKLKAQTSKIVSSFKT 164

Query: 166 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 224
             ++    R + GHRDGVW+V+V R GQP++ +ASAD T R+W+  +G+C+LQY GHSGS
Sbjct: 165 PSMTSTMQREYVGHRDGVWEVSVGRSGQPIIATASADHTARIWAIDSGRCLLQYIGHSGS 224

Query: 225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWE------------CLVSNNDNDSDLDESK 272
           VNSVRF PN++L LSASGD S H+WQA ++W+               S     ++L  + 
Sbjct: 225 VNSVRFHPNRELALSASGDNSAHVWQAAVDWDIPKRVPSLEELPVASSERSTTNNLISNN 284

Query: 273 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
           E  +   TLRTP++EL GH+NVV+AADWL   EQ++TASWDR ANL+D ETG I+ +L
Sbjct: 285 EEQDDPPTLRTPIRELFGHTNVVMAADWLPGAEQLVTASWDRTANLYDTETGEIIHTL 342

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357621111|gb|EHJ73064.1| hypothetical protein KGM_07136 [Danaus plexippus]

 Score =  284 bits (727), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 195/288 (67%), Gaps = 17/288 (5%)

Query: 52  LRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESII 111
           L  +L  E  +  +P   + +L+ LFSQIE+EF++LY ENLNLQ+KID+L EKL+RES +
Sbjct: 18  LPNYLKMEDSESSIPPVFRCRLHELFSQIEKEFDVLYTENLNLQEKIDILSEKLERESYV 77

Query: 112 NEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 171
            ++  +  D        KN    KV  S  ++QK+KT++KLKVQTSKIVSSFK    SC 
Sbjct: 78  GDR--QIVDYVDFETSGKN---SKVKLSQSNSQKVKTSHKLKVQTSKIVSSFKAPTYSCQ 132

Query: 172 KIRSFSGHRDGVWDVA-VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
            IR F+GH+DG+WDV   RPGQ ++G+ASAD T  +WS + GKC+LQY+GH+GSVNS+RF
Sbjct: 133 LIREFTGHKDGIWDVTTARPGQALIGTASADHTACVWSVEWGKCLLQYTGHAGSVNSIRF 192

Query: 231 LPNKDLVLSASGDKSVHIWQAVINWEC-------LVSNNDNDSDLDESKEPDESSITLRT 283
            P +D+ L++SGD + H+WQA +NW+           +   +  L ES  P+     LRT
Sbjct: 193 HPTRDIALTSSGDNTAHVWQAAVNWDLPRGQSSEEELDGGGEESLGESDRPE----VLRT 248

Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
           P+ EL GH  VV+AADWL+ G+ VITASWDR ANL+DVETG  LQ LT
Sbjct: 249 PLTELSGHMGVVVAADWLTGGDHVITASWDRTANLYDVETGDCLQILT 296

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322802316|gb|EFZ22712.1| hypothetical protein SINV_12250 [Solenopsis invicta]

 Score =  284 bits (727), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 147/308 (47%), Positives = 197/308 (63%), Gaps = 54/308 (17%)

Query: 56  LNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEK- 114
             SE +D  +P +++ +L  LF QIE+EFE+LY ENL LQ+KID+L +KL+RE   + + 
Sbjct: 55  FRSELEDSPIPPALRCRLYELFQQIEKEFEMLYTENLGLQEKIDILNDKLERECYGSGER 114

Query: 115 ---------YPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 165
                    YPE           KN +KQK + +N SAQK+K ++KLK QTSKIVSSFKT
Sbjct: 115 SLPPGDLTDYPE----------TKNLSKQKSMGAN-SAQKIKASHKLKAQTSKIVSSFKT 163

Query: 166 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 224
             ++C   + + GHRDGVW+V+V R GQ ++ +ASAD T R+W+    +C+LQY GH+GS
Sbjct: 164 PSMTCTMQKEYMGHRDGVWEVSVGRSGQSIIATASADHTARIWAIDNSRCLLQYIGHNGS 223

Query: 225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC----------------------LVSNN 262
           VNSVRF PN++L LSASGD S H+WQA ++W+                       L+SNN
Sbjct: 224 VNSVRFHPNRELALSASGDCSAHVWQAAVDWDMPKRVSSLEELPVAGSERSTANNLISNN 283

Query: 263 DNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
           D   D            TLRTP++ELLGH++VVIAADWLS  EQ++TASWDR ANL+D E
Sbjct: 284 DEQDD----------PPTLRTPIRELLGHTSVVIAADWLSGAEQLVTASWDRTANLYDTE 333

Query: 323 TGTILQSL 330
           TG I+ +L
Sbjct: 334 TGEIIHTL 341

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242018602|ref|XP_002429763.1| WD-repeat protein, putative [Pediculus humanus corporis] gi|212514775|gb|EEB17025.1| WD-repeat protein, putative [Pediculus humanus corporis]

 Score =  283 bits (725), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 201/288 (69%), Gaps = 16/288 (5%)

Query: 50  SMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRES 109
           S+ R+H      D  +P  +K +L+ LF QIE+EFE L  EN++LQ+KI++L ++L++ES
Sbjct: 39  SLYRSHFEG---DSFIPKVLKTRLHDLFLQIEKEFESLCFENISLQEKIEVLNDRLEKES 95

Query: 110 IINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLS 169
           +  +K  +  D+E  +      +K K        QK+KT +KLK QTSKIVSSFK   ++
Sbjct: 96  LSTDKPNDVGDIENSSVKGNYSSKLK------RVQKVKTAHKLKAQTSKIVSSFKGPTMN 149

Query: 170 CYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 228
           C  +R +SGH+DGVW+V V RPGQP++G+ASAD +  +W    GKC+LQY GHSGSVNS+
Sbjct: 150 CSIVREYSGHKDGVWEVDVARPGQPLIGTASADHSACIWGVDNGKCLLQYLGHSGSVNSI 209

Query: 229 RFLPNKDLVLSASGDKSVHIWQAVINWECL---VSNNDNDSDLDESKEP---DESSITLR 282
            F P KDLVL+ASGD++ HIWQAVINW+ L    S  D D++ DE  E     + + +LR
Sbjct: 210 CFHPTKDLVLTASGDQTTHIWQAVINWDQLKTYSSEEDGDTEKDEFAEDLKMFDGAPSLR 269

Query: 283 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
           TPV+EL GH+ VV++ADWL  G+Q+ITASWDR ANL+DVETG ++QSL
Sbjct: 270 TPVRELTGHTGVVVSADWLPSGDQIITASWDRTANLYDVETGELVQSL 317

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021536|ref|XP_003694619.1| PREDICTED: WD repeat-containing protein 37-like [Apis florea]

 Score =  281 bits (719), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 144/288 (50%), Positives = 194/288 (67%), Gaps = 15/288 (5%)

Query: 56  LNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESI-INEK 114
             ++ D+ VLP +++ +L  LF QIE+EFE+LY ENL LQ+KID L E+L+RE     E+
Sbjct: 56  FRTDPDESVLPPTLRCRLFELFQQIEKEFEVLYTENLGLQEKIDTLSERLERECYGSGER 115

Query: 115 YPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIR 174
                D+    +  K  +KQK +A N + +   T+NKLK QTSKIVSSFKT  ++C   R
Sbjct: 116 SLPLGDVADFPD-TKGLSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKTPTMTCSMQR 174

Query: 175 SFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
            +SGHRDGVW+V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGSVNS+RF P 
Sbjct: 175 EYSGHRDGVWEVSVGRSGQ-IIATASADHSARVWAVDSGRCLLQYIGHSGSVNSIRFHPT 233

Query: 234 KDLVLSASGDKSVHIWQAVINWECLVSNND-----------NDSDLDESKEPDESSITLR 282
           K+L L++SGD S H+WQA ++W+     N            N S +    E  E   TLR
Sbjct: 234 KELALTSSGDNSAHVWQAAVDWDLPKRQNSSEELSGLSSDRNLSGVIVLNEEQEEPPTLR 293

Query: 283 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
           TPV+ELLGH+ VV+AADWL D EQV+TASWDR ANL+DVETG I+ +L
Sbjct: 294 TPVRELLGHTGVVMAADWLPDAEQVVTASWDRTANLYDVETGEIIHTL 341

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787768|ref|XP_394678.3| PREDICTED: WD repeat-containing protein 37-like [Apis mellifera]

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 144/297 (48%), Positives = 197/297 (66%), Gaps = 15/297 (5%)

Query: 47  QDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 106
           Q  ++      ++ D+ VLP +++ +L  LF QIE+EFE+LY ENL LQ+KID L E+L+
Sbjct: 47  QPTALHYAAFRTDPDESVLPPTLRCRLFELFQQIEKEFEVLYTENLGLQEKIDTLSERLE 106

Query: 107 RESI-INEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 165
           RE     E+     D+    +  K  +KQK +A N + +   T+NKLK QTSKIVSSFKT
Sbjct: 107 RECYGSGERSLPLGDVADFPD-TKGLSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKT 165

Query: 166 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 224
             ++C   R +SGHRDGVW+V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGS
Sbjct: 166 PTMTCSMQREYSGHRDGVWEVSVGRSGQ-IIATASADHSARVWAVDSGRCLLQYIGHSGS 224

Query: 225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNND-----------NDSDLDESKE 273
           +NS+RF P K+L L++SGD S H+WQA ++W+     N            N S +    E
Sbjct: 225 INSIRFHPTKELALTSSGDNSAHVWQAAVDWDLPKRQNSSEELSGLSSDRNLSGVIVLNE 284

Query: 274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
             E   TLRTPV+ELLGH+ VV+AADWL D EQV+TASWDR ANL+DVETG I+ +L
Sbjct: 285 EQEEPPTLRTPVRELLGHTGVVMAADWLPDAEQVVTASWDRTANLYDVETGEIIHTL 341

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724308|ref|XP_003400524.1| PREDICTED: WD repeat-containing protein 37-like [Bombus terrestris]

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 144/297 (48%), Positives = 200/297 (67%), Gaps = 15/297 (5%)

Query: 47  QDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 106
           Q  ++      ++ DD +LP +++ +L  LF QIE+EFE+LY ENL LQ+KID L E+L+
Sbjct: 50  QPTALHYAAFRTDPDDNILPPALRCRLFELFQQIEKEFEILYTENLGLQEKIDTLNERLE 109

Query: 107 RESI-INEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 165
           RE     E+     D+    +  K+ +KQK +A N + +   T+NKLK QTSKIVSSFKT
Sbjct: 110 RECYGSGERSLPLGDVADFPD-TKSLSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKT 168

Query: 166 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 224
             ++C   R + GHRDGVW+V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGS
Sbjct: 169 PTMTCSMQREYFGHRDGVWEVSVGRAGQ-IIATASADHSARVWAMDSGRCLLQYIGHSGS 227

Query: 225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDND------SDLDES-----KE 273
           VNSVRF P K+L L++SGD S H+WQA ++W+     N ++      SD + S      E
Sbjct: 228 VNSVRFHPTKELALTSSGDNSAHVWQAAVDWDLPKRQNSSEDLSGLSSDRNLSGAITLNE 287

Query: 274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
             E   TLRTP++ELLGH+ VV+AADWL D EQ++TASWDR ANL+DVETG I+ +L
Sbjct: 288 EQEEPPTLRTPIRELLGHTGVVMAADWLPDAEQIVTASWDRTANLYDVETGEIIHTL 344

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420808|ref|XP_003492632.1| PREDICTED: WD repeat-containing protein 37-like [Bombus impatiens]

 Score =  281 bits (718), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 142/297 (47%), Positives = 200/297 (67%), Gaps = 15/297 (5%)

Query: 47  QDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 106
           Q  ++      ++ DD +LP +++ +L  LF QIE+EFE+LY ENL LQ+KID L E+L+
Sbjct: 50  QPTALHYAAFRTDPDDNILPPALRCRLFELFQQIEKEFEILYTENLGLQEKIDTLNERLE 109

Query: 107 RESI-INEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT 165
           RE     E+     D+    +  K+ +KQK +A N + +   T+NKLK QTSKIVSSFKT
Sbjct: 110 RECYGSGERSLPLGDVADFPD-TKSLSKQKSMAGNSAPKTKTTSNKLKAQTSKIVSSFKT 168

Query: 166 SLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 224
             ++C   R + GHRDGVW+V+V R GQ ++ +ASAD + R+W+  +G+C+LQY GHSGS
Sbjct: 169 PTMTCSMQREYFGHRDGVWEVSVGRAGQ-IIATASADHSARVWAMDSGRCLLQYIGHSGS 227

Query: 225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL-----------VSNNDNDSDLDESKE 273
           VNSVRF P K+L L++SGD + H+WQA ++W+             +S++ N S +    E
Sbjct: 228 VNSVRFHPTKELALTSSGDNTAHVWQAAVDWDLPKRQNSSEDLSGLSSDRNLSGVIALNE 287

Query: 274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
             E   TLRTP++ELLGH+ VV+AADWL D EQ++TASWDR ANL+DVETG I+ +L
Sbjct: 288 EQEEPPTLRTPIRELLGHTGVVMAADWLPDAEQIVTASWDRTANLYDVETGEIIHTL 344

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	360
FB|FBgn0038617	487	CG12333 [Drosophila melanogast	0.541	0.400	0.487	2e-53
MGI|MGI:1920393	496	Wdr37 "WD repeat domain 37" [M	0.816	0.592	0.417	7.4e-50
ZFIN|ZDB-GENE-030131-8101	494	wdr37 "WD repeat domain 37" [D	0.836	0.609	0.383	2.6e-47
UNIPROTKB|B5DG67	423	wdr12 "Ribosome biogenesis pro	0.433	0.368	0.343	2.7e-14
UNIPROTKB|I3L3N5	208	PAFAH1B1 "Platelet-activating	0.430	0.745	0.291	4.8e-14
UNIPROTKB|B4DF38	205	PAFAH1B1 "Platelet-activating	0.430	0.756	0.291	4.8e-14
UNIPROTKB|Q5BJ90	423	wdr12 "Ribosome biogenesis pro	0.430	0.366	0.333	9.6e-13
ZFIN|ZDB-GENE-030131-371	422	wdr12 "WD repeat domain 12" [D	0.411	0.350	0.339	1.6e-12
UNIPROTKB|Q5REE6	423	WDR12 "Ribosome biogenesis pro	0.708	0.602	0.289	2.1e-12
UNIPROTKB|Q9GZL7	423	WDR12 "Ribosome biogenesis pro	0.708	0.602	0.285	2.8e-12

FB|FBgn0038617 CG12333 [Drosophila melanogaster (taxid:7227)]

 Score = 502 (181.8 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
 Identities = 98/201 (48%), Positives = 129/201 (64%)

Query:   137 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 196
             L+S     K K +NK+K QTS+IVSSFK   +    +R F GH+DG+W VA + GQP++G
Sbjct:   117 LSSATGGSKAKASNKIKAQTSRIVSSFKAPTVVSTVVREFGGHKDGIWQVAAKAGQPIIG 176

Query:   197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 256
             +ASAD T  +W  ++ +C+LQY GH+GSVNS++F   +DLVL+ SGD + HIWQA +NWE
Sbjct:   177 TASADHTACIWGVESARCLLQYQGHAGSVNSIKFHQQRDLVLTGSGDGTAHIWQAAVNWE 236

Query:   257 CLVXXXXXXXXXXXXKEP--DESSI-TLRTPVKELLG---HSNVVIAADWLSDGEQVITA 310
                             E   D   + TLRTP+ E  G   H +VV+AADWLS  +Q+IT 
Sbjct:   237 VPKKGHSSEEELDDSDEQVEDRDRVDTLRTPLCEFTGPGGHLSVVVAADWLSSMDQIITG 296

Query:   311 SWDRVANLFDVETGTILQSLT 331
             SWDR A L+DVETG  LQ LT
Sbjct:   297 SWDRTAILWDVETGLPLQPLT 317

GO:0046331 "lateral inhibition" evidence=IMP

MGI|MGI:1920393 Wdr37 "WD repeat domain 37" [Mus musculus (taxid:10090)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 136/326 (41%), Positives = 178/326 (54%)

Query:    25 TMSQKSTKHK-RTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIERE 83
             T  Q   K K  + S + +N  +Q+ + L   +  E  D  LPSSV+  L  LF QIERE
Sbjct:    10 TARQAKQKRKSHSLSIRRTNSSEQERTGLPREM-LEGQDSKLPSSVRSTLLELFGQIERE 68

Query:    84 FXXXXXXXXXXQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPS- 142
             F          + +ID L E+L  E        +  D      ++K   K K   S    
Sbjct:    69 FENLYIENLELRREIDTLNERLAGEG-------QAIDG---AELSKGQLKTKASHSTSQL 118

Query:   143 AQKLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSAS 199
             +QKLKTT   K  TSKIVSSFKT  S   C  ++ + GHRDG+WDV+V   QP VLG+AS
Sbjct:   119 SQKLKTT--YKASTSKIVSSFKTTTSRAICQLVKEYIGHRDGIWDVSVTRTQPIVLGTAS 176

Query:   200 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV 259
             AD T  LWS +TGKC+++Y+GH GSVNS++F P++ L L+ASGD++ HIW+ V+      
Sbjct:   177 ADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYVVQLPTPQ 236

Query:   260 XXXXXXXXXXXXKE-----PDESSI---------TLRTPVKELLGHSNVVIAADWLSDGE 305
                          E      DE  I         T+R P+  L  H  VVIAADWL  G+
Sbjct:   237 PVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTVRVPLTSLKSHQGVVIAADWLVGGK 296

Query:   306 QVITASWDRVANLFDVETGTILQSLT 331
             QV+TASWDR ANL+DVET  ++ SLT
Sbjct:   297 QVVTASWDRTANLYDVETSELVHSLT 322

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-8101 wdr37 "WD repeat domain 37" [Danio rerio (taxid:7955)]

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 128/334 (38%), Positives = 182/334 (54%)

Query:    15 IRTHNMPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLN 74
             + + N   +  + QK   H  + S + +N  +QD + ++  +  E  D  LP +++  L 
Sbjct:     3 VESGNSAAARQVKQKRKSH--SLSIRRTNSTEQDRTGMQRDM-LEGQDSKLPMALRSNLL 59

Query:    75 SLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQ 134
              LF QIEREF          + +I+ L E+L  E     +  E  D+      +K   K 
Sbjct:    60 DLFGQIEREFENLYIENLELRREIESLNERLSGEG----QTVEGGDL------SKGALKT 109

Query:   135 KVLASNPS-AQKLKTTNKLKVQTSKIVSSFK--TSLLSCYKIRSFSGHRDGVWDVAVRPG 191
             K   S    +QKLKTT   K  TSKIVSSFK  TS   C  ++ + GHRDG+WD+AV   
Sbjct:   110 KASHSTSQLSQKLKTT--YKASTSKIVSSFKATTSRAVCQLVKEYVGHRDGIWDLAVTRV 167

Query:   192 QP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
             QP VLG+ASAD    LWS +TGKC+L+Y+GH+GSVNS++F P + + L+ASGD++ HIW+
Sbjct:   168 QPLVLGTASADHCSMLWSIETGKCLLKYAGHAGSVNSIKFHPTEQMALTASGDQTAHIWR 227

Query:   251 AVINWECL-----VXXXXXXXXXXXXKE--------PDESSITLRTPVKELLGHSNVVIA 297
              ++          +            K+        P+E   T+R     L  H  VVIA
Sbjct:   228 YMVQLPLPQPPADISASLDDDVDFSDKDEADGDADGPNECP-TIRVATTTLKSHQGVVIA 286

Query:   298 ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
             ADWL  G+QV+TASWDR ANL+DVET  ++ +LT
Sbjct:   287 ADWLVGGKQVVTASWDRAANLYDVETSELVHTLT 320

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|B5DG67 wdr12 "Ribosome biogenesis protein wdr12" [Salmo salar (taxid:8030)]

 Score = 206 (77.6 bits), Expect = 2.7e-14, P = 2.7e-14
 Identities = 57/166 (34%), Positives = 85/166 (51%)

Query:   173 IRSFSGHRDGVWDVA--VRPG-QPVLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 225
             + + +GH D V DVA   R G   +L +AS D+T+ LW  +++  K   ++   GH+GSV
Sbjct:   133 VMTVAGHTDVVKDVAWVKRDGLTSLLLTASLDQTILLWEWNSERNKLKARHCCRGHAGSV 192

Query:   226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
             +++   P +    S S DK + IW AV   E               K+  E     RTP+
Sbjct:   193 DTIATDPTRTKFCSGSWDKMLKIWSAVATEE--EEEEEEPPSRPRKKQKTEQLGLTRTPL 250

Query:   286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
               L GH+  V +  WL D E++ +ASWD    L+D ETG++  SLT
Sbjct:   251 MTLSGHNEAVSSVLWL-DSEEICSASWDHTIRLWDAETGSVKTSLT 295

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0030687 "preribosome, large subunit precursor" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|I3L3N5 PAFAH1B1 "Platelet-activating factor acetylhydrolase IB subunit alpha" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 4.8e-14, P = 4.8e-14
 Identities = 47/161 (29%), Positives = 78/161 (48%)

Query:   173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
             IR+  GH   V  VA+ P    + SAS D+T+++W  QTG CV  ++GH   V  VR  P
Sbjct:    17 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 74

Query:   233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLRTPVKELL 289
             N+D  L+ S S D++V +W  V   EC                 P+ S  ++       +
Sbjct:    75 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 133

Query:   290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
             GH N V    + S G+ +++ + D+   ++D +    +++L
Sbjct:   134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 174

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

UNIPROTKB|B4DF38 PAFAH1B1 "Platelet-activating factor acetylhydrolase IB subunit alpha" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 4.8e-14, P = 4.8e-14
 Identities = 47/161 (29%), Positives = 78/161 (48%)

Query:   173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
             IR+  GH   V  VA+ P    + SAS D+T+++W  QTG CV  ++GH   V  VR  P
Sbjct:    14 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 71

Query:   233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLRTPVKELL 289
             N+D  L+ S S D++V +W  V   EC                 P+ S  ++       +
Sbjct:    72 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 130

Query:   290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
             GH N V    + S G+ +++ + D+   ++D +    +++L
Sbjct:   131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 171

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0051301 "cell division" evidence=IEA

UNIPROTKB|Q5BJ90 wdr12 "Ribosome biogenesis protein wdr12" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 193 (73.0 bits), Expect = 9.6e-13, P = 9.6e-13
 Identities = 55/165 (33%), Positives = 84/165 (50%)

Query:   173 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 225
             I + +GH + V DV  V+      +L SAS D+T++LW  +T+  K    +   GH+GSV
Sbjct:   133 IMTITGHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTERNKIKALHCCRGHAGSV 192

Query:   226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
             +S+    ++    S S DK + IW AV + E               K+  E     R P+
Sbjct:   193 DSIAVDASRTKFCSGSWDKMLKIWSAVPSEE--EDEYEETSDRPRKKQKTEKMGLTRIPI 250

Query:   286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
               L GHS  V +  W SD +++ +ASWD    ++DVETGT+  +L
Sbjct:   251 VTLSGHSEAVSSVLW-SDVDEICSASWDHNIKIWDVETGTVKSTL 294

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0030687 "preribosome, large subunit precursor" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

ZFIN|ZDB-GENE-030131-371 wdr12 "WD repeat domain 12" [Danio rerio (taxid:7955)]

 Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 54/159 (33%), Positives = 80/159 (50%)

Query:   173 IRSFSGHRDGVWDVA--VRPG-QPVLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 225
             + + +GH D V DVA   R G   VL +AS D+TV LW  +++  K   ++   GH+GSV
Sbjct:   133 VMTVAGHADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGSV 192

Query:   226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
             +++   P +    S S DK + IW AV   E               K+  E     RTP+
Sbjct:   193 DTIAVDPTRTKFCSGSWDKMLKIWSAVPTEE---EDEIEEPNRPRKKQKTEQMGLTRTPL 249

Query:   286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
               L GH+  V +  W+ D +++ +ASWD    L+D ETG
Sbjct:   250 MTLSGHNEAVSSVLWM-DADELCSASWDHTIRLWDAETG 287

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0030687 "preribosome, large subunit precursor" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

GO:0006364 "rRNA processing" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q5REE6 WDR12 "Ribosome biogenesis protein WDR12" [Pongo abelii (taxid:9601)]

 Score = 190 (71.9 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 83/287 (28%), Positives = 125/287 (43%)

Query:    58 SEYDDV--VLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIIN--- 112
             SE  D+  ++   +K K N     +E +F           DK  M ME +  E ++    
Sbjct:    28 SEIADLSNIINKLLKDK-NEFHKHVEFDFLIKGQFLRMPLDK-HMEMENISSEEVVEIEY 85

Query:   113 -EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 171
              EKY      +C+      F+   + +S   A++   T     +TS+I S      L   
Sbjct:    86 VEKYTAPQPEQCM------FHDDWI-SSIKGAEEWILTGSYD-KTSRIWS------LEGK 131

Query:   172 KIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGS 224
              I +  GH D V DVA V+      +L SAS D+T+ LW  + +  K    +   GH+GS
Sbjct:   132 SIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGS 191

Query:   225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTP 284
             V+S+    +     S S DK + IW  V   E               K+  E     RTP
Sbjct:   192 VDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDE--EDEMEESTNRPRKKQKTEQLGLTRTP 249

Query:   285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
             V  L GH   V +  W SD E++ +ASWD    ++DVE+G++  +LT
Sbjct:   250 VVTLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLT 295

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0030687 "preribosome, large subunit precursor" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|Q9GZL7 WDR12 "Ribosome biogenesis protein WDR12" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 82/287 (28%), Positives = 125/287 (43%)

Query:    58 SEYDDV--VLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIIN--- 112
             SE  D+  ++   +K K N     +E +F           DK  M ME +  E ++    
Sbjct:    28 SEIADLSNIINKLLKDK-NEFHKHVEFDFLIKGQFLRMPLDK-HMEMENISSEEVVEIEY 85

Query:   113 -EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 171
              EKY      +C+      F+   + +S   A++   T     +TS+I S      L   
Sbjct:    86 VEKYTAPQPEQCM------FHDDWI-SSIKGAEEWILTGSYD-KTSRIWS------LEGK 131

Query:   172 KIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGS 224
              I +  GH D V DVA V+      +L SAS D+T+ LW  + +  K    +   GH+GS
Sbjct:   132 SIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGS 191

Query:   225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTP 284
             V+S+    +     S S DK + IW  V   E               K+  E     RTP
Sbjct:   192 VDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDE--EDEMEESTNRPRKKQKTEQLGLTRTP 249

Query:   285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
             +  L GH   V +  W SD E++ +ASWD    ++DVE+G++  +LT
Sbjct:   250 IVTLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLT 295

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0042273 "ribosomal large subunit biogenesis" evidence=IC

GO:0008283 "cell proliferation" evidence=IMP

GO:0070545 "PeBoW complex" evidence=IDA

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0030687 "preribosome, large subunit precursor" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	360
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-29
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	7e-29
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	7e-26
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-25
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-24
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	6e-14
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-12
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	7e-11
smart00320	40	smart00320, WD40, WD40 repeats	5e-09
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	1e-08
smart00320	40	smart00320, WD40, WD40 repeats	2e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-05
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-05
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	6e-04
smart00320	40	smart00320, WD40, WD40 repeats	9e-04

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  114 bits (287), Expect = 2e-29
 Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 42/195 (21%)

Query: 161 SSFKTSLLSC--------------YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRL 206
           S+  T L S                 +R+ +GH   V  VA  P   +L S+S D+T+++
Sbjct: 60  SADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKV 119

Query: 207 WSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDS 266
           W  +TGKC+    GH+  VNSV F P+   V S+S D ++ +W                 
Sbjct: 120 WDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLW----------------- 162

Query: 267 DLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 326
           DL   K            V  L GH+  V +  +  DGE+++++S D    L+D+ TG  
Sbjct: 163 DLRTGK-----------CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKC 211

Query: 327 LQSLTEPGEAIRAAA 341
           L +L      + + A
Sbjct: 212 LGTLRGHENGVNSVA 226

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  112 bits (283), Expect = 7e-29
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 28/169 (16%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           + +  GH D V  VA  P    + S+S D T++LW  +TGKCV   +GH+G VNSV F P
Sbjct: 128 LTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSP 187

Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS 292
           + + +LS+S D ++ +W                 DL   K            +  L GH 
Sbjct: 188 DGEKLLSSSSDGTIKLW-----------------DLSTGKC-----------LGTLRGHE 219

Query: 293 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
           N V +  +  DG  + + S D    ++D+ TG  +Q+L+    ++ + A
Sbjct: 220 NGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLA 268

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  104 bits (262), Expect = 7e-26
 Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 28/152 (18%)

Query: 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 228
           +   + + +GH   V  VA  P    L S+S+D T++LW   TGKC+    GH   VNSV
Sbjct: 166 TGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSV 225

Query: 229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL 288
            F P+  L+ S S D ++ +W                             +     V+ L
Sbjct: 226 AFSPDGYLLASGSEDGTIRVW----------------------------DLRTGECVQTL 257

Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
            GH+N V +  W  DG+++ + S D    ++D
Sbjct: 258 SGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  101 bits (254), Expect = 9e-25
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 28/159 (17%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
            R+  GH  GV  VA  P   +L + S D T+++W  +TG+ +    GH+G V  V    
Sbjct: 2   RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASA 61

Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS 292
           +   + S S DK++ +W                             +     V+ L GH+
Sbjct: 62  DGTYLASGSSDKTIRLW----------------------------DLETGECVRTLTGHT 93

Query: 293 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
           + V +  +  DG  + ++S D+   ++DVETG  L +L 
Sbjct: 94  SYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLR 132

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  101 bits (253), Expect = 1e-24
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 28/176 (15%)

Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
            L +   +R+  GH   V DVA       L S S+D+T+RLW  +TG+CV   +GH+  V
Sbjct: 37  DLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYV 96

Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPV 285
           +SV F P+  ++ S+S DK++ +W                             +     +
Sbjct: 97  SSVAFSPDGRILSSSSRDKTIKVW----------------------------DVETGKCL 128

Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
             L GH++ V +  +  DG  V ++S D    L+D+ TG  + +LT     + + A
Sbjct: 129 TTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVA 184

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 72.4 bits (176), Expect = 6e-14
 Identities = 72/329 (21%), Positives = 126/329 (38%), Gaps = 22/329 (6%)

Query: 23  SDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIER 82
            ++ +    K K     +L    +    +      S    + L S     L  L S + R
Sbjct: 3   DNSSTSSENKSKLLKKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLR 62

Query: 83  EFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPS 142
             E          D   +L    D  +I          +        + +  K+  S+P 
Sbjct: 63  GHEDSITSIAFSPDGELLLSGSSDG-TIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPD 121

Query: 143 AQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS-AD 201
              +   +     T K+        L    IR+  GH + V  +A  P   +L S S  D
Sbjct: 122 GNSILLASSSLDGTVKLWDLSTPGKL----IRTLEGHSESVTSLAFSPDGKLLASGSSLD 177

Query: 202 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLVS 260
            T++LW  +TGK +   +GH+  V+S+ F P+   L+ S S D ++ +W          +
Sbjct: 178 GTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRST 237

Query: 261 NNDNDSDLDESKEPDESSI---------------TLRTPVKELLGHSNVVIAADWLSDGE 305
            + +   +  S  PD S +               +  + ++ L GHS+ V++  +  DG+
Sbjct: 238 LSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGK 297

Query: 306 QVITASWDRVANLFDVETGTILQSLTEPG 334
            + + S D    L+D+ETG +L SLT  G
Sbjct: 298 LLASGSSDGTVRLWDLETGKLLSSLTLKG 326

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 64.7 bits (158), Expect = 9e-12
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 28/118 (23%)

Query: 214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKE 273
                 GH+G V  V F P+  L+ + SGD ++ +W                       E
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVW---------------------DLE 39

Query: 274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
             E   TL+       GH+  V      +DG  + + S D+   L+D+ETG  +++LT
Sbjct: 40  TGELLRTLK-------GHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLT 90

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 62.8 bits (151), Expect = 7e-11
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRF 230
           +R+ SGH   V  VA  P   +L S S+D TVRLW  +TGK +   +  GH G V+S+ F
Sbjct: 277 LRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF 336

Query: 231 LPN-KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLR------- 282
            P+   LV   S D ++ +W  +   + L +   + + L  S  PD   ++         
Sbjct: 337 SPDGSLLVSGGSDDGTIRLWD-LRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVR 395

Query: 283 -------TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE 335
                  + ++ L GH++ V + D+  DG+ + + S D    L+D++T     S +  G+
Sbjct: 396 LWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGK 455

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 51.2 bits (123), Expect = 5e-09
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 211 TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
           +G+ +    GH+G V SV F P+   + S S D ++ +W
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 49.7 bits (119), Expect = 1e-08
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 212 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
           GK +    GH+G V SV F P+ +L+ S S D +V +W
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 208
           +++  GH   V  VA  P    L S S D T++LW 
Sbjct: 5   LKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 208
            +R+  GH   V  VA  P   +L S S D TVR+W 
Sbjct: 3   LLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
            L +   +++  GH   V  V+  P   V+ S S D TVRLW   TG  +    GH+  V
Sbjct: 357 DLRTGKPLKTLEGH-SNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRV 415

Query: 226 NSVRFLPNKDLVLSASGDKSVHIW 249
            S+ F P+   + S S D ++ +W
Sbjct: 416 TSLDFSPDGKSLASGSSDNTIRLW 439

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 47/230 (20%), Positives = 88/230 (38%), Gaps = 35/230 (15%)

Query: 120 DMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRS--FS 177
           D    ++ NK+   +K             +         +++    SL+S   + S    
Sbjct: 3   DNSSTSSENKSKLLKKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLR 62

Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFL-PNK 234
           GH D +  +A  P   +L S S+D T++LW    G+ +++     H  SV+ +    P+ 
Sbjct: 63  GHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDG 122

Query: 235 DLVLSASG--DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS 292
           + +L AS   D +V +W      +                            ++ L GHS
Sbjct: 123 NSILLASSSLDGTVKLWDLSTPGKL---------------------------IRTLEGHS 155

Query: 293 NVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPGEAIRAAA 341
             V +  +  DG+ + + S  D    L+D+ TG  L +L    + + + A
Sbjct: 156 ESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLA 205

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 208
            L +   +++ SGH + V  +A  P    L S SAD T+R+W 
Sbjct: 247 DLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 17/58 (29%), Positives = 29/58 (50%)

Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
             + L GH+  V    +  DG+ + T S D    ++D+ETG +L++L      +R  A
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVA 58

Length = 289

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.6 bits (85), Expect = 6e-04
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
              ++ L GH+  V +  +  DG  + + S D    ++D
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 36.1 bits (84), Expect = 9e-04
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
              +K L GH+  V +  +  DG+ + + S D    L+D
Sbjct: 2   GELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	360
KOG0300|consensus	481		100.0
KOG0272|consensus	459		100.0
KOG0272|consensus	459		99.97
KOG0263|consensus	707		99.97
KOG0271|consensus	480		99.97
KOG0263|consensus	707		99.97
KOG0271|consensus	480		99.97
KOG0279|consensus	315		99.96
KOG0286|consensus	343		99.96
KOG0286|consensus	343		99.96
KOG0279|consensus	315		99.96
KOG0315|consensus	311		99.95
KOG0266|consensus	456		99.95
KOG0285|consensus	460		99.94
KOG0295|consensus	406		99.94
KOG0285|consensus	460		99.94
KOG0276|consensus	794		99.94
KOG0291|consensus	893		99.94
KOG0645|consensus	312		99.94
KOG0273|consensus	524		99.94
KOG0295|consensus	406		99.93
KOG0273|consensus	524		99.93
PTZ00421	493	coronin; Provisional	99.93
KOG0645|consensus	312		99.93
KOG0319|consensus	775		99.93
KOG0284|consensus	464		99.92
KOG0284|consensus	464		99.92
KOG0266|consensus	456		99.92
KOG0276|consensus	794		99.92
PTZ00420	568	coronin; Provisional	99.91
KOG0318|consensus	603		99.91
KOG0282|consensus	503		99.91
KOG0296|consensus	399		99.91
KOG0281|consensus	499		99.9
KOG0316|consensus	307		99.9
KOG0316|consensus	307		99.9
KOG0283|consensus	712		99.9
KOG1407|consensus	313		99.9
KOG0313|consensus	423		99.9
KOG0650|consensus	733		99.9
KOG0265|consensus	338		99.9
KOG0292|consensus	1202		99.9
KOG0643|consensus	327		99.9
KOG0643|consensus	327		99.9
KOG0283|consensus	712		99.89
KOG0282|consensus	503		99.89
PTZ00421	493	coronin; Provisional	99.89
KOG0277|consensus	311		99.89
KOG0292|consensus	1202		99.89
KOG0265|consensus	338		99.89
KOG0274|consensus	537		99.89
KOG0281|consensus	499		99.88
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.88
KOG0291|consensus	893		99.88
KOG0319|consensus	775		99.87
KOG0318|consensus	603		99.87
KOG0275|consensus	508		99.87
PLN00181	793	protein SPA1-RELATED; Provisional	99.87
KOG0293|consensus	519		99.87
KOG1407|consensus	313		99.87
KOG0289|consensus	506		99.86
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.86
KOG0296|consensus	399		99.86
KOG0288|consensus	459		99.86
KOG0315|consensus	311		99.86
KOG0267|consensus	825		99.86
KOG0302|consensus	440		99.85
KOG0289|consensus	506		99.85
KOG0647|consensus	347		99.85
KOG0264|consensus	422		99.85
KOG0277|consensus	311		99.85
KOG0306|consensus	888		99.85
PTZ00420	568	coronin; Provisional	99.85
KOG0275|consensus	508		99.85
KOG0310|consensus	487		99.85
KOG0973|consensus	942		99.85
KOG0310|consensus	487		99.85
KOG0274|consensus	537		99.85
KOG1446|consensus	311		99.84
KOG0300|consensus	481		99.84
KOG0308|consensus	735		99.84
KOG0264|consensus	422		99.84
KOG2096|consensus	420		99.84
KOG0269|consensus	839		99.84
KOG0640|consensus	430		99.84
KOG0973|consensus	942		99.84
PLN00181	793	protein SPA1-RELATED; Provisional	99.83
KOG0301|consensus	745		99.83
KOG0641|consensus	350		99.83
KOG0302|consensus	440		99.83
KOG1332|consensus	299		99.83
KOG0278|consensus	334		99.82
KOG0640|consensus	430		99.82
KOG0278|consensus	334		99.82
KOG0772|consensus	641		99.82
KOG0294|consensus	362		99.82
KOG0303|consensus	472		99.82
KOG0305|consensus	484		99.82
KOG0305|consensus	484		99.82
KOG0308|consensus	735		99.81
KOG0647|consensus	347		99.81
KOG0294|consensus	362		99.81
KOG0267|consensus	825		99.81
KOG0646|consensus	476		99.8
KOG0772|consensus	641		99.8
KOG0301|consensus	745		99.8
KOG0313|consensus	423		99.8
KOG0299|consensus	479		99.79
KOG1036|consensus	323		99.79
KOG0639|consensus	705		99.79
KOG4283|consensus	397		99.79
KOG1273|consensus	405		99.77
KOG0268|consensus	433		99.77
KOG1539|consensus	910		99.77
KOG0306|consensus	888		99.76
KOG0641|consensus	350		99.76
KOG0293|consensus	519		99.76
KOG1446|consensus	311		99.76
KOG0269|consensus	839		99.75
KOG0268|consensus	433		99.74
KOG2055|consensus	514		99.74
KOG1332|consensus	299		99.74
KOG0270|consensus	463		99.73
KOG0299|consensus	479		99.73
KOG1009|consensus	434		99.72
KOG0642|consensus	577		99.72
KOG4328|consensus	498		99.72
KOG1274|consensus	933		99.71
KOG2445|consensus	361		99.7
KOG0646|consensus	476		99.7
KOG1063|consensus	764		99.7
KOG0771|consensus	398		99.69
KOG1274|consensus	933		99.69
KOG1034|consensus	385		99.67
KOG1063|consensus	764		99.65
KOG1036|consensus	323		99.65
KOG2445|consensus	361		99.64
KOG0321|consensus	720		99.63
KOG0639|consensus	705		99.63
KOG4328|consensus	498		99.62
KOG2919|consensus	406		99.62
KOG1009|consensus	434		99.62
KOG1445|consensus	1012		99.62
KOG4283|consensus	397		99.61
KOG2048|consensus	691		99.6
KOG0288|consensus	459		99.6
KOG1408|consensus	1080		99.6
KOG0307|consensus	1049		99.59
KOG1007|consensus	370		99.59
KOG0303|consensus	472		99.59
KOG2394|consensus	636		99.58
KOG2106|consensus	626		99.58
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.58
KOG1034|consensus	385		99.58
KOG0642|consensus	577		99.57
KOG1523|consensus	361		99.57
KOG4378|consensus	673		99.57
KOG0322|consensus	323		99.57
KOG0644|consensus	1113		99.57
KOG1273|consensus	405		99.56
KOG2048|consensus	691		99.55
KOG0644|consensus	1113		99.55
KOG0290|consensus	364		99.54
KOG1524|consensus	737		99.54
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.54
KOG1310|consensus	758		99.53
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.53
KOG0270|consensus	463		99.53
KOG1523|consensus	361		99.53
KOG2055|consensus	514		99.52
KOG1188|consensus	376		99.52
COG2319	466	FOG: WD40 repeat [General function prediction only	99.52
KOG1007|consensus	370		99.52
KOG0321|consensus	720		99.52
KOG1538|consensus	1081		99.51
KOG1408|consensus	1080		99.5
KOG4378|consensus	673		99.5
KOG2106|consensus	626		99.49
KOG1445|consensus	1012		99.49
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.49
KOG0650|consensus	733		99.48
KOG2110|consensus	391		99.45
KOG0649|consensus	325		99.45
KOG2096|consensus	420		99.44
KOG2394|consensus	636		99.43
KOG1188|consensus	376		99.42
KOG0649|consensus	325		99.41
KOG1272|consensus	545		99.4
KOG1539|consensus	910		99.4
PRK01742	429	tolB translocation protein TolB; Provisional	99.39
KOG0290|consensus	364		99.39
COG2319	466	FOG: WD40 repeat [General function prediction only	99.38
KOG1538|consensus	1081		99.37
KOG0307|consensus	1049		99.37
KOG2110|consensus	391		99.37
KOG4227|consensus	609		99.35
PRK05137	435	tolB translocation protein TolB; Provisional	99.35
KOG1963|consensus	792		99.35
KOG2919|consensus	406		99.34
KOG2139|consensus	445		99.34
KOG1240|consensus	1431		99.32
KOG1524|consensus	737		99.3
KOG0974|consensus	967		99.3
KOG3881|consensus	412		99.29
KOG0974|consensus	967		99.28
KOG0322|consensus	323		99.27
PRK02889	427	tolB translocation protein TolB; Provisional	99.27
KOG2139|consensus	445		99.26
KOG2111|consensus	346		99.26
PRK04922	433	tolB translocation protein TolB; Provisional	99.26
PRK03629	429	tolB translocation protein TolB; Provisional	99.25
KOG2321|consensus	703		99.24
PRK01742	429	tolB translocation protein TolB; Provisional	99.24
KOG1517|consensus	1387		99.22
KOG2111|consensus	346		99.2
KOG1409|consensus	404		99.2
KOG1587|consensus	555		99.2
KOG1272|consensus	545		99.19
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.19
KOG3881|consensus	412		99.18
PRK03629	429	tolB translocation protein TolB; Provisional	99.15
KOG1517|consensus	1387		99.13
KOG1963|consensus	792		99.13
KOG0771|consensus	398		99.13
KOG1310|consensus	758		99.13
KOG4547|consensus	541		99.11
PRK04922	433	tolB translocation protein TolB; Provisional	99.11
PRK00178	430	tolB translocation protein TolB; Provisional	99.11
PRK05137	435	tolB translocation protein TolB; Provisional	99.11
PRK11028	330	6-phosphogluconolactonase; Provisional	99.11
KOG1587|consensus	555		99.1
PRK02889	427	tolB translocation protein TolB; Provisional	99.08
PRK11028	330	6-phosphogluconolactonase; Provisional	99.07
KOG4190|consensus	1034		99.03
PRK04792	448	tolB translocation protein TolB; Provisional	99.03
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.01
KOG0280|consensus	339		99.0
KOG0280|consensus	339		99.0
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.96
PRK01029	428	tolB translocation protein TolB; Provisional	98.93
KOG1334|consensus	559		98.93
KOG4227|consensus	609		98.91
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.91
KOG2321|consensus	703		98.88
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.88
KOG3914|consensus	390		98.87
KOG2315|consensus	566		98.86
KOG2695|consensus	425		98.85
KOG4547|consensus	541		98.82
KOG4497|consensus	447		98.82
KOG4497|consensus	447		98.79
PRK00178	430	tolB translocation protein TolB; Provisional	98.79
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.78
PRK04792	448	tolB translocation protein TolB; Provisional	98.76
PRK01029	428	tolB translocation protein TolB; Provisional	98.76
KOG1354|consensus	433		98.74
KOG2315|consensus	566		98.74
KOG2066|consensus	846		98.73
KOG1064|consensus	2439		98.73
KOG1334|consensus	559		98.72
COG4946	668	Uncharacterized protein related to the periplasmic	98.68
KOG1240|consensus	1431		98.61
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.61
KOG0309|consensus	1081		98.57
KOG4714|consensus	319		98.56
PRK04043	419	tolB translocation protein TolB; Provisional	98.53
KOG1064|consensus	2439		98.52
KOG4532|consensus	344		98.52
KOG1832|consensus	1516		98.52
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.49
COG4946	668	Uncharacterized protein related to the periplasmic	98.47
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.47
KOG1409|consensus	404		98.46
KOG4532|consensus	344		98.45
KOG1354|consensus	433		98.45
KOG3914|consensus	390		98.43
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.41
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.41
KOG2041|consensus	1189		98.41
KOG4714|consensus	319		98.4
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.4
KOG2314|consensus	698		98.4
KOG2041|consensus	1189		98.39
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.36
PRK04043	419	tolB translocation protein TolB; Provisional	98.36
KOG1912|consensus	1062		98.35
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.35
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.35
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.33
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.27
KOG1275|consensus	1118		98.26
KOG2066|consensus	846		98.25
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.23
KOG2695|consensus	425		98.22
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.21
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.21
KOG2314|consensus	698		98.14
KOG0309|consensus	1081		98.13
KOG0882|consensus	558		98.1
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.07
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.04
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.03
KOG1645|consensus	463		98.01
KOG1920|consensus	1265		97.97
KOG3621|consensus	726		97.92
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.87
KOG1912|consensus	1062		97.86
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	97.84
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.82
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	97.78
KOG4640|consensus	665		97.77
KOG1645|consensus	463		97.76
KOG4190|consensus	1034		97.76
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.74
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	97.74
KOG0882|consensus	558		97.73
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.73
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.71
KOG4640|consensus	665		97.66
KOG2114|consensus	933		97.65
KOG4649|consensus	354		97.61
KOG3617|consensus	1416		97.6
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.59
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	97.55
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.52
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.48
KOG2395|consensus	644		97.45
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.39
KOG2114|consensus	933		97.37
KOG1275|consensus	1118		97.35
KOG1008|consensus	783		97.31
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.26
PRK02888	635	nitrous-oxide reductase; Validated	97.23
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.2
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	97.18
KOG1008|consensus	783		97.1
KOG3617|consensus	1416		97.06
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.99
PF08145	260	BOP1NT: BOP1NT (NUC169) domain; InterPro: IPR01295	96.98
KOG4499|consensus	310		96.95
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.95
PRK13616	591	lipoprotein LpqB; Provisional	96.95
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.95
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	96.93
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	96.89
KOG1920|consensus	1265		96.86
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.84
KOG3621|consensus	726		96.76
KOG2079|consensus	1206		96.73
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	96.71
PRK02888	635	nitrous-oxide reductase; Validated	96.69
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	96.68
KOG2079|consensus	1206		96.61
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.55
COG3391	381	Uncharacterized conserved protein [Function unknow	96.54
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.37
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	96.28
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.15
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.14
KOG2444|consensus	238		96.1
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.05
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.04
COG3391	381	Uncharacterized conserved protein [Function unknow	96.02
PRK13616	591	lipoprotein LpqB; Provisional	95.98
KOG2444|consensus	238		95.93
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.9
KOG1832|consensus	1516		95.81
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	95.68
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.68
KOG1916|consensus	1283		95.54
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	95.46
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	95.46
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	95.41
KOG4649|consensus	354		95.37
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	95.35
KOG3630|consensus	1405		95.35
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	95.31
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	95.26
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	95.19
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	95.11
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	95.03
PHA02713	557	hypothetical protein; Provisional	94.99
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	94.95
PRK13684	334	Ycf48-like protein; Provisional	94.83
KOG2395|consensus	644		94.7
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.34
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	94.24
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.04
KOG2247|consensus	615		93.78
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	93.65
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	93.61
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	93.29
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	93.23
PRK10115	686	protease 2; Provisional	93.12
PHA02713	557	hypothetical protein; Provisional	93.07
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	93.03
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	92.93
KOG1916|consensus	1283		92.84
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	92.78
KOG2377|consensus	657		92.7
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	92.48
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	92.47
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	92.46
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	92.22
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	92.06
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	91.99
PLN00033	398	photosystem II stability/assembly factor; Provisio	91.52
KOG4441|consensus	571		91.49
COG5167	776	VID27 Protein involved in vacuole import and degra	91.25
TIGR03032	335	conserved hypothetical protein TIGR03032. This pro	91.18
PHA03098	534	kelch-like protein; Provisional	91.1
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	90.97
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	90.73
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	90.48
PF13449	326	Phytase-like: Esterase-like activity of phytase	90.38
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	90.02
KOG4441|consensus	571		89.91
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	89.9
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	89.79
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	89.72
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	89.69
PF12768	281	Rax2: Cortical protein marker for cell polarity	89.62
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	89.15
KOG2280|consensus	829		88.43
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	87.94
PHA03098	534	kelch-like protein; Provisional	87.85
PHA02790	480	Kelch-like protein; Provisional	87.55
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	87.5
KOG4499|consensus	310		87.32
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	87.11
PRK13684	334	Ycf48-like protein; Provisional	86.87
PHA02790	480	Kelch-like protein; Provisional	85.87
KOG4460|consensus	741		85.74
KOG3616|consensus	1636		85.59
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	85.26
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	84.99
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	84.45
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	84.26
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	83.56
KOG3630|consensus	1405		82.9
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	82.32
KOG2377|consensus	657		81.95
PRK10115	686	protease 2; Provisional	81.94
KOG1897|consensus	1096		81.89
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	81.41

>KOG0300|consensus

Probab=100.00  E-value=4.2e-38  Score=264.10  Aligned_cols=280  Identities=39%  Similarity=0.641  Sum_probs=228.8

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHh--hcccccccccccCCCCCCcchhhccccCcccccccccCCCc
Q psy11015         66 PSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLM--EKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSA  143 (360)
Q Consensus        66 ~~~~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (360)
                      ..++|+||.+||.+||+||+.||.||.+|+++++-+.  ++.+.+.+.....    ..+..    ....+.| .+....+
T Consensus        41 da~~RarL~~LFgqIErEFe~LY~EN~aL~~~~di~~~~~r~aaeGqA~~~a----~~~~~----G~qlk~K-~S~~t~q  111 (481)
T KOG0300|consen   41 DAPYRARLYQLFGQIEREFETLYAENCALQERADIVQLTARSAAEGQAANVA----AQEVF----GVQLKGK-SSRKTIQ  111 (481)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhhhhhhhhccccccchh----hhccc----ccccccc-cchhhhh
Confidence            4569999999999999999999999999999987665  3332222111000    00000    0111222 3345567


Q ss_pred             ccceeeeeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc
Q psy11015        144 QKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG  223 (360)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~  223 (360)
                      +.++....+++.+++++++|+.....++++++|.||.++||.++.....+.+.++|.|.+.+||.+++|.|+.+|.||.+
T Consensus       112 ~~qKl~t~~ka~tsrivssFk~~t~~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~G  191 (481)
T KOG0300|consen  112 MGQKLRTALKAPTSRIVSSFKDGTVKFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTG  191 (481)
T ss_pred             hhHHHHHhhcCCcchheeeecCCceeEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeeccccc
Confidence            78888999999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             CeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC--C----------CCCCCccccccceeEeeCC
Q psy11015        224 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES--K----------EPDESSITLRTPVKELLGH  291 (360)
Q Consensus       224 ~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~~~h  291 (360)
                      .|++|+|++.+.+++++++|++.+||....+++.+....+........  .          ...........|+..+.+|
T Consensus       192 SVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH  271 (481)
T KOG0300|consen  192 SVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGH  271 (481)
T ss_pred             ceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeecc
Confidence            999999999999999999999999999887777766444422211111  0          0111223556789999999


Q ss_pred             CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        292 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       292 ~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      .+.|.++.|...|++++|+|+|++..+||+++|..++.+.+|...++.++-+|..++++|++.
T Consensus       272 ~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSr  334 (481)
T KOG0300|consen  272 RAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSR  334 (481)
T ss_pred             ccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEecc
Confidence            999999999999999999999999999999999999999999999999999999999998874

>KOG0272|consensus

Probab=100.00  E-value=2.6e-32  Score=236.87  Aligned_cols=164  Identities=25%  Similarity=0.332  Sum_probs=152.5

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD  243 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d  243 (360)
                      ....+..+.+|.||++.|.++.|+|.  +..++||+.||+|++|++.+..++..+.+|...|..++|+|+|++|+|++.|
T Consensus       203 ~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD  282 (459)
T KOG0272|consen  203 SVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFD  282 (459)
T ss_pred             ecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccc
Confidence            34677999999999999999999997  5589999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      .+-++||+.++                            ..+....||+..|.+++|.|||..++|||.|..-+|||+++
T Consensus       283 ~tWRlWD~~tk----------------------------~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRt  334 (459)
T KOG0272|consen  283 STWRLWDLETK----------------------------SELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRT  334 (459)
T ss_pred             cchhhcccccc----------------------------hhhHhhcccccccceeEecCCCceeeccCccchhheeeccc
Confidence            99999999887                            34455679999999999999999999999999999999999


Q ss_pred             CeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        324 GTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       324 ~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      |.++..+.+|..+|.+++|+|+|-.+||++ |+++
T Consensus       335 gr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~  369 (459)
T KOG0272|consen  335 GRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTC  369 (459)
T ss_pred             CcEEEEecccccceeeEeECCCceEEeecCCCCcE
Confidence            999999999999999999999999999887 5544

>KOG0272|consensus

Probab=99.97  E-value=2e-30  Score=225.24  Aligned_cols=164  Identities=23%  Similarity=0.405  Sum_probs=152.0

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      ..+...+....||..+|.+++|+|||.+++|||.|..-||||+++|+++..+.||...|.+|+|+|+|..++|||.|+++
T Consensus       290 ~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~  369 (459)
T KOG0272|consen  290 LETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTC  369 (459)
T ss_pred             cccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcE
Confidence            35566667778999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCe
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      +|||++..                            ..+.++.+|..-|+.++|+| .|.+|+|+|.|++++||...++.
T Consensus       370 kVWDLR~r----------------------------~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~  421 (459)
T KOG0272|consen  370 KVWDLRMR----------------------------SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWS  421 (459)
T ss_pred             EEeeeccc----------------------------ccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcc
Confidence            99999854                            45778889999999999999 78899999999999999999999


Q ss_pred             EEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        326 ILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +++++.+|.+.|.++.++|++.+++|++ |.+||
T Consensus       422 ~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~K  455 (459)
T KOG0272|consen  422 PLKSLAGHEGKVISLDISPDSQAIATSSFDRTIK  455 (459)
T ss_pred             cchhhcCCccceEEEEeccCCceEEEeccCceee
Confidence            9999999999999999999999888776 65554

>KOG0263|consensus

Probab=99.97  E-value=6.5e-30  Score=237.61  Aligned_cols=166  Identities=28%  Similarity=0.444  Sum_probs=155.4

Q ss_pred             cCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        165 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       165 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      |...+..++..+.||..+||++.|+|-|-++||||.|++.++|......+++.+.||-+.|.|+.|+|+..++++||.|+
T Consensus       478 Wsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~  557 (707)
T KOG0263|consen  478 WSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDR  557 (707)
T ss_pred             eecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCc
Confidence            34467788899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      +|++||+.+|                            ..+..|.||.++|.+++|+|+|++|++|+.||.|.+||+.+|
T Consensus       558 tVRlWDv~~G----------------------------~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~  609 (707)
T KOG0263|consen  558 TVRLWDVSTG----------------------------NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG  609 (707)
T ss_pred             eEEEEEcCCC----------------------------cEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC
Confidence            9999999988                            457788999999999999999999999999999999999999


Q ss_pred             eEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ..+..+.+|.+.|.++.|+.+|.+||++. |..||
T Consensus       610 ~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~  644 (707)
T KOG0263|consen  610 SLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVR  644 (707)
T ss_pred             cchhhhhcccCceeEEEEecCCCEEEecCCCCeEE
Confidence            99999999999999999999999888766 55554

>KOG0271|consensus

Probab=99.97  E-value=2.3e-29  Score=216.19  Aligned_cols=199  Identities=23%  Similarity=0.311  Sum_probs=157.6

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEEEeCCCcCeEEEEEee
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~-~~~~~~h~~~v~~i~~~p  232 (360)
                      |.....+..|  +..+..++.+.+||...|.|++|+|||..||||+.||+|++||..+|++ ...+.+|...|++++|.|
T Consensus       133 GsGD~TvR~W--D~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep  210 (480)
T KOG0271|consen  133 GSGDTTVRLW--DLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEP  210 (480)
T ss_pred             cCCCceEEee--ccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecc
Confidence            3444444344  4456677889999999999999999999999999999999999999864 467899999999999987


Q ss_pred             -----CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCC--------------------------------------
Q psy11015        233 -----NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLD--------------------------------------  269 (360)
Q Consensus       233 -----~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~--------------------------------------  269 (360)
                           ..++++++|.||+++|||+..+.+......+..+..-                                      
T Consensus       211 ~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahw  290 (480)
T KOG0271|consen  211 LHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHW  290 (480)
T ss_pred             cccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchh
Confidence                 5678999999999999998876555443333110000                                      


Q ss_pred             ---CC---------------------------------------------CCCCCCccc------cccceeEeeCCCCcE
Q psy11015        270 ---ES---------------------------------------------KEPDESSIT------LRTPVKELLGHSNVV  295 (360)
Q Consensus       270 ---~~---------------------------------------------~~~~~~~~~------~~~~~~~~~~h~~~v  295 (360)
                         ..                                             ....+....      ..+|+..+.+|..-|
T Consensus       291 vN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lV  370 (480)
T KOG0271|consen  291 VNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALV  370 (480)
T ss_pred             eeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhhe
Confidence               00                                             000011111      122566778999999


Q ss_pred             EEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        296 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       296 ~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      +.+.|+||++++|++|.|..|++||.++|+.+.+|++|-++|+.++|+.|.+++++++.
T Consensus       371 n~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~Sk  429 (480)
T KOG0271|consen  371 NHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSK  429 (480)
T ss_pred             eeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCC
Confidence            99999999999999999999999999999999999999999999999999999998884

>KOG0263|consensus

Probab=99.97  E-value=1e-29  Score=236.28  Aligned_cols=161  Identities=30%  Similarity=0.412  Sum_probs=151.1

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ......+++.||.++|+.++|+|+.++|+++|.|++||+|.+.+..++..++||..+|+++.|+|.|-+|||||.|++.+
T Consensus       439 ~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tAr  518 (707)
T KOG0263|consen  439 DSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTAR  518 (707)
T ss_pred             cCCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceee
Confidence            34455667999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +|.....                            .|...+.||-+.|.|++|+|++.|++|||.|.++|+||+.+|..+
T Consensus       519 LWs~d~~----------------------------~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~V  570 (707)
T KOG0263|consen  519 LWSTDHN----------------------------KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSV  570 (707)
T ss_pred             eeecccC----------------------------CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEE
Confidence            9986543                            578889999999999999999999999999999999999999999


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      ..|.+|.++|++++|+|+|+++|||....
T Consensus       571 RiF~GH~~~V~al~~Sp~Gr~LaSg~ed~  599 (707)
T KOG0263|consen  571 RIFTGHKGPVTALAFSPCGRYLASGDEDG  599 (707)
T ss_pred             EEecCCCCceEEEEEcCCCceEeecccCC
Confidence            99999999999999999999999998543

>KOG0271|consensus

Probab=99.97  E-value=1.3e-29  Score=217.71  Aligned_cols=161  Identities=24%  Similarity=0.367  Sum_probs=147.5

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      .+...+.||.++|.|+.|+|+|..|+||+.|.++|+||+.+..+..+.++|...|.|++|+|||..|++|+.||+|++||
T Consensus       106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwd  185 (480)
T KOG0271|consen  106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWD  185 (480)
T ss_pred             eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEec
Confidence            56677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-----CCCEEEEEECCCcEEEEECCCCe
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-----DGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-----~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      ..+|.+                           ....+.+|...|++++|.|     .+++|+++|.||.++|||+..+.
T Consensus       186 pktg~~---------------------------~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~  238 (480)
T KOG0271|consen  186 PKTGQQ---------------------------IGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT  238 (480)
T ss_pred             CCCCCc---------------------------ccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce
Confidence            988843                           3567889999999999976     67899999999999999999999


Q ss_pred             EEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        326 ILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      ++..+.+|..+|+|+.|-.+|-+-.++-|.+||
T Consensus       239 ~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIk  271 (480)
T KOG0271|consen  239 CVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIK  271 (480)
T ss_pred             EEEEeccCccceEEEEEcCCceEEecCCCceEE
Confidence            999999999999999998777666666677765

>KOG0279|consensus

Probab=99.96  E-value=2.8e-28  Score=201.75  Aligned_cols=174  Identities=21%  Similarity=0.334  Sum_probs=154.4

Q ss_pred             eecCCeEEEeeecC---ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEE
Q psy11015        153 KVQTSKIVSSFKTS---LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR  229 (360)
Q Consensus       153 ~~~~~~~~~~~~~~---~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~  229 (360)
                      .++..+.+-.|+..   ...|..++.|.||...|..+..+++|++.+++|.|+++++||+.+|++.+.|.||...|.+++
T Consensus        33 sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva  112 (315)
T KOG0279|consen   33 SASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVA  112 (315)
T ss_pred             EcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEE
Confidence            44455555445543   466788999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC--CCcEEEEEEcCC--CC
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH--SNVVIAADWLSD--GE  305 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~i~~sp~--g~  305 (360)
                      |+||.+.+++||.|++|++|++..+                             +..++..+  ...|+++.|+|+  ..
T Consensus       113 ~s~dn~qivSGSrDkTiklwnt~g~-----------------------------ck~t~~~~~~~~WVscvrfsP~~~~p  163 (315)
T KOG0279|consen  113 FSTDNRQIVSGSRDKTIKLWNTLGV-----------------------------CKYTIHEDSHREWVSCVRFSPNESNP  163 (315)
T ss_pred             ecCCCceeecCCCcceeeeeeeccc-----------------------------EEEEEecCCCcCcEEEEEEcCCCCCc
Confidence            9999999999999999999997654                             34444433  689999999998  67


Q ss_pred             EEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        306 QVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       306 ~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      +|+++|+|+++++||+++.+..+.+.+|.+.++.++++|||.+.+++...
T Consensus       164 ~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkd  213 (315)
T KOG0279|consen  164 IIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKD  213 (315)
T ss_pred             EEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCC
Confidence            99999999999999999999999999999999999999999999998754

>KOG0286|consensus

Probab=99.96  E-value=1.6e-27  Score=198.49  Aligned_cols=184  Identities=20%  Similarity=0.336  Sum_probs=160.5

Q ss_pred             eeeeeecCCeEEE-eee----------------cCccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECC
Q psy11015        149 TNKLKVQTSKIVS-SFK----------------TSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQ  210 (360)
Q Consensus       149 ~~~~~~~~~~~~~-~~~----------------~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~  210 (360)
                      .+.+.+|++++-+ .|.                |+.++++.+..|.||.+.|.+++++| +++.++||+.|+..++||++
T Consensus       138 ~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R  217 (343)
T KOG0286|consen  138 SRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVR  217 (343)
T ss_pred             eeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeecc
Confidence            3456677776655 222                23378899999999999999999999 89999999999999999999


Q ss_pred             CCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC
Q psy11015        211 TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG  290 (360)
Q Consensus       211 ~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (360)
                      .+.++++|.||.+.|++|+|.|+|.-|++||.|+++++||++...+...+                          .-..
T Consensus       218 ~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~y--------------------------s~~~  271 (343)
T KOG0286|consen  218 SGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVY--------------------------SHDS  271 (343)
T ss_pred             CcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeee--------------------------ccCc
Confidence            99999999999999999999999999999999999999999987554321                          1112


Q ss_pred             CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       291 h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      -..+|++++||..|++|+.|..|.++.+||.-.++.+..+.+|.+.|+++..+|+|.-++|++ |..+|
T Consensus       272 ~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lr  340 (343)
T KOG0286|consen  272 IICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLR  340 (343)
T ss_pred             ccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHhee
Confidence            235799999999999999999999999999999999999999999999999999999999876 66665

>KOG0286|consensus

Probab=99.96  E-value=1.1e-26  Score=193.50  Aligned_cols=164  Identities=20%  Similarity=0.325  Sum_probs=148.3

Q ss_pred             ecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC------eEEEEEeCCCcCeEEEEEeeCCCEE
Q psy11015        164 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG------KCVLQYSGHSGSVNSVRFLPNKDLV  237 (360)
Q Consensus       164 ~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~------~~~~~~~~h~~~v~~i~~~p~~~~l  237 (360)
                      .|+..+...++.+.-....|+.++|+|.++++|+|+.|+...||++.+.      +..+.+.+|++.+.|+.|-+ ...|
T Consensus        81 vWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~i  159 (343)
T KOG0286|consen   81 VWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHI  159 (343)
T ss_pred             EEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCce
Confidence            3445666777777777889999999999999999999999999999854      45677999999999999987 4578


Q ss_pred             EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcE
Q psy11015        238 LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVA  316 (360)
Q Consensus       238 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i  316 (360)
                      +++|+|.++.+||+.++                            ..+..+.||.+.|.+++++| +++.+++|+.|+..
T Consensus       160 lT~SGD~TCalWDie~g----------------------------~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~a  211 (343)
T KOG0286|consen  160 LTGSGDMTCALWDIETG----------------------------QQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSA  211 (343)
T ss_pred             EecCCCceEEEEEcccc----------------------------eEEEEecCCcccEEEEecCCCCCCeEEecccccce
Confidence            99999999999999988                            45678899999999999999 99999999999999


Q ss_pred             EEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        317 NLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       317 ~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      ++||++.+.++++|.+|...|+++.|.|+|.-++|++|.+
T Consensus       212 klWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~  251 (343)
T KOG0286|consen  212 KLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDA  251 (343)
T ss_pred             eeeeccCcceeEeecccccccceEEEccCCCeeeecCCCc
Confidence            9999999999999999999999999999999999999754

>KOG0279|consensus

Probab=99.96  E-value=4e-27  Score=194.92  Aligned_cols=165  Identities=27%  Similarity=0.347  Sum_probs=146.7

Q ss_pred             ecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC--CcCeEEEEEeeC--CCEEEE
Q psy11015        164 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH--SGSVNSVRFLPN--KDLVLS  239 (360)
Q Consensus       164 ~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h--~~~v~~i~~~p~--~~~l~s  239 (360)
                      .|+..+++..+.|.||+..|.+++|+++...++|||.|++|++||+-. .|..++..+  ...|.|++|+|+  ..+|++
T Consensus        89 lWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs  167 (315)
T KOG0279|consen   89 LWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSCVRFSPNESNPIIVS  167 (315)
T ss_pred             EEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEEEEEcCCCCCcEEEE
Confidence            344567799999999999999999999999999999999999999874 444444433  788999999998  679999


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEE
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF  319 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iw  319 (360)
                      +|.|++|++||+++.                            +....+.||++.++.+++||||..+++|+.||.+.+|
T Consensus       168 ~s~DktvKvWnl~~~----------------------------~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~Lw  219 (315)
T KOG0279|consen  168 ASWDKTVKVWNLRNC----------------------------QLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLW  219 (315)
T ss_pred             ccCCceEEEEccCCc----------------------------chhhccccccccEEEEEECCCCCEEecCCCCceEEEE
Confidence            999999999999865                            3566788999999999999999999999999999999


Q ss_pred             ECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        320 DVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       320 d~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      |++.++.+..+. |...|.+++|+|+..+++.+.+..||
T Consensus       220 dL~~~k~lysl~-a~~~v~sl~fspnrywL~~at~~sIk  257 (315)
T KOG0279|consen  220 DLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAATATSIK  257 (315)
T ss_pred             EccCCceeEecc-CCCeEeeEEecCCceeEeeccCCceE
Confidence            999999999886 77899999999999999999887765

>KOG0315|consensus

Probab=99.95  E-value=5.8e-27  Score=191.02  Aligned_cols=201  Identities=18%  Similarity=0.266  Sum_probs=162.3

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      .+....-+..|+..+....++.+|.+|+.-|+++.|..+|+.++|||+||+++|||++...+-+.|+ |.++|+++..+|
T Consensus        56 Aaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhp  134 (311)
T KOG0315|consen   56 AAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHP  134 (311)
T ss_pred             hhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecC
Confidence            3444556667887777788999999999999999999999999999999999999999988878887 889999999999


Q ss_pred             CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC-CCCCC--------------------CCccccccceeEeeCC
Q psy11015        233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE-SKEPD--------------------ESSITLRTPVKELLGH  291 (360)
Q Consensus       233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~--------------------~~~~~~~~~~~~~~~h  291 (360)
                      +...|++|..+|.|++||+................... ...++                    .-......|+..+..|
T Consensus       135 nQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah  214 (311)
T KOG0315|consen  135 NQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAH  214 (311)
T ss_pred             CcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecc
Confidence            99999999999999999998774333322221111111 00000                    0011222467788899


Q ss_pred             CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        292 SNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       292 ~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ++.+..+.+||++++|+|+|.|.+++||+..+. +.-..+.+|...+++++|+.+|.+++|++.
T Consensus       215 ~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTass  278 (311)
T KOG0315|consen  215 NGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASS  278 (311)
T ss_pred             cceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCC
Confidence            999999999999999999999999999999887 556778899999999999999999998873

>KOG0266|consensus

Probab=99.95  E-value=2.8e-26  Score=216.65  Aligned_cols=157  Identities=33%  Similarity=0.533  Sum_probs=145.8

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC-CCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST-QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~-~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      ...+++.+|...|.+++|+|++.++++|+.|++|+|||+ ..+.+++++.+|...|++++|+|+|+++++|+.|++|++|
T Consensus       194 ~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriW  273 (456)
T KOG0266|consen  194 NLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIW  273 (456)
T ss_pred             hhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEE
Confidence            377888999999999999999999999999999999999 5669999999999999999999999999999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe--EE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT--IL  327 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~--~~  327 (360)
                      |+.++                            ++...+.+|...|++++|+++|++|++++.||.|++||+.++.  ++
T Consensus       274 d~~~~----------------------------~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~  325 (456)
T KOG0266|consen  274 DVRTG----------------------------ECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCL  325 (456)
T ss_pred             eccCC----------------------------eEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeee
Confidence            99876                            4678899999999999999999999999999999999999999  67


Q ss_pred             EEEecCCCc--eEEEEEcCCCCEEEccccc
Q psy11015        328 QSLTEPGEA--IRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       328 ~~l~~h~~~--v~~~~~~~~g~~las~~~~  355 (360)
                      ..+..+...  ++.+.|+|+|.+++++++.
T Consensus       326 ~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d  355 (456)
T KOG0266|consen  326 KLLSGAENSAPVTSVQFSPNGKYLLSASLD  355 (456)
T ss_pred             ecccCCCCCCceeEEEECCCCcEEEEecCC
Confidence            888777655  9999999999999988865

>KOG0285|consensus

Probab=99.94  E-value=1.6e-26  Score=197.27  Aligned_cols=163  Identities=25%  Similarity=0.372  Sum_probs=151.4

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ....+.+.+.||.+.|.|+++.|...+|+||+.|++++|||+.+|+...++.||...|..+++++.-.|+++++.|+.|+
T Consensus       139 apwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VK  218 (460)
T KOG0285|consen  139 APWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVK  218 (460)
T ss_pred             CcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeE
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      .||+..+                            ..+....||-+.|.+++.+|.-+.|+||+.|.+++|||+++...+
T Consensus       219 CwDLe~n----------------------------kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V  270 (460)
T KOG0285|consen  219 CWDLEYN----------------------------KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASV  270 (460)
T ss_pred             EEechhh----------------------------hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceE
Confidence            9999865                            457778899999999999999999999999999999999999999


Q ss_pred             EEEecCCCceEEEEEcC-CCCEEEcccccchh
Q psy11015        328 QSLTEPGEAIRAAAGRT-GGPIRASPLLLAIR  358 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~-~g~~las~~~~~ir  358 (360)
                      .++.+|..+|..+.+.| +++++..+.|.+||
T Consensus       271 ~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvr  302 (460)
T KOG0285|consen  271 HVLSGHTNPVASVMCQPTDPQVITGSHDSTVR  302 (460)
T ss_pred             EEecCCCCcceeEEeecCCCceEEecCCceEE
Confidence            99999999999999988 45566666688776

>KOG0295|consensus

Probab=99.94  E-value=1.3e-26  Score=198.20  Aligned_cols=193  Identities=25%  Similarity=0.353  Sum_probs=162.6

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEEEEEe
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      ..++..++++.+.++||++.|.+++|+..|.++++++.|-.+++||..+ .+|++.+.+|...|.+++|-|-|+++++++
T Consensus       133 kv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~s  212 (406)
T KOG0295|consen  133 KVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCS  212 (406)
T ss_pred             EEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecc
Confidence            3345567788999999999999999999999999999999999999987 578889999999999999999999999999


Q ss_pred             CCCcEEEEEcccCeeEeeeCCCCCC--------CCCC-CCCCCCCc-----cccccceeEeeCCCCcEEEEEEcCC----
Q psy11015        242 GDKSVHIWQAVINWECLVSNNDNDS--------DLDE-SKEPDESS-----ITLRTPVKELLGHSNVVIAADWLSD----  303 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~-----~~~~~~~~~~~~h~~~v~~i~~sp~----  303 (360)
                      .|.+|+.|++.+|++...+..+..-        +... +....+..     .....+...+.+|..+|.+++|.|.    
T Consensus       213 rD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~  292 (406)
T KOG0295|consen  213 RDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYP  292 (406)
T ss_pred             cccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCc
Confidence            9999999999999998877666321        1111 11111211     2233455778899999999999762    


Q ss_pred             -----------CCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        304 -----------GEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       304 -----------g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                                 |.++++|+.|++|++||+.+|.++.++.+|.+.|..++|+|.|++++|.+|.
T Consensus       293 ~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDD  355 (406)
T KOG0295|consen  293 SISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADD  355 (406)
T ss_pred             chhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecC
Confidence                       2589999999999999999999999999999999999999999999998864

>KOG0285|consensus

Probab=99.94  E-value=2.9e-26  Score=195.71  Aligned_cols=166  Identities=27%  Similarity=0.410  Sum_probs=158.0

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      +..++++..++.||...|..+++++-.+++++++.|+.|+.||++..+.++.|.||-+.|.|++.+|.-+.|++|+.|.+
T Consensus       179 Dlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst  258 (460)
T KOG0285|consen  179 DLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDST  258 (460)
T ss_pred             EcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcce
Confidence            34788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      ++|||+++.                            ..+..+.||..+|.++.+.|....++|||.|++|++||++.|+
T Consensus       259 ~RvWDiRtr----------------------------~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agk  310 (460)
T KOG0285|consen  259 IRVWDIRTR----------------------------ASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGK  310 (460)
T ss_pred             EEEeeeccc----------------------------ceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCc
Confidence            999999865                            4678899999999999999999999999999999999999999


Q ss_pred             EEEEEecCCCceEEEEEcCCCCEEEcccccchhc
Q psy11015        326 ILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIRS  359 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir~  359 (360)
                      ...++..|...|.+++.+|....+|+++...|+.
T Consensus       311 t~~tlt~hkksvral~lhP~e~~fASas~dnik~  344 (460)
T KOG0285|consen  311 TMITLTHHKKSVRALCLHPKENLFASASPDNIKQ  344 (460)
T ss_pred             eeEeeecccceeeEEecCCchhhhhccCCcccee
Confidence            9999999999999999999999999999888764

>KOG0276|consensus

Probab=99.94  E-value=5.8e-26  Score=206.12  Aligned_cols=176  Identities=25%  Similarity=0.360  Sum_probs=158.0

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeEEEEEe
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~~i~~~  231 (360)
                      .|++..-+++|+.  .++..++.|.+|.+-|.|++++|..++++|+|.|-+|++||.+.. .|.++|.||...|.+++|+
T Consensus        72 ~GsDD~~IrVfny--nt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fn  149 (794)
T KOG0276|consen   72 TGSDDMQIRVFNY--NTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFN  149 (794)
T ss_pred             EecCCceEEEEec--ccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEec
Confidence            3455555555554  578899999999999999999999999999999999999999865 8999999999999999999


Q ss_pred             e-CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC--CEEE
Q psy11015        232 P-NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--EQVI  308 (360)
Q Consensus       232 p-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g--~~l~  308 (360)
                      | |.+.|+++|.|+||+||.+...                            .+..++.||...|+++.+-+.|  .+|+
T Consensus       150 PkD~ntFaS~sLDrTVKVWslgs~----------------------------~~nfTl~gHekGVN~Vdyy~~gdkpylI  201 (794)
T KOG0276|consen  150 PKDPNTFASASLDRTVKVWSLGSP----------------------------HPNFTLEGHEKGVNCVDYYTGGDKPYLI  201 (794)
T ss_pred             CCCccceeeeeccccEEEEEcCCC----------------------------CCceeeeccccCcceEEeccCCCcceEE
Confidence            9 5679999999999999998654                            5678899999999999998755  5999


Q ss_pred             EEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        309 TASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       309 tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ||+.|.+++|||..+..|++++.+|...|..+.|+|.-++++|++ |+++|
T Consensus       202 sgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvr  252 (794)
T KOG0276|consen  202 SGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVR  252 (794)
T ss_pred             ecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEE
Confidence            999999999999999999999999999999999999999999887 77766

>KOG0291|consensus

Probab=99.94  E-value=3.1e-25  Score=205.26  Aligned_cols=191  Identities=21%  Similarity=0.336  Sum_probs=153.4

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      +|.|.+  -.-+-..+||-..+.+++++|||++++||+.||.|+|||..+|-|..+|..|++.|+.+.|+..|+.++++|
T Consensus       334 VweWqs--EsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssS  411 (893)
T KOG0291|consen  334 VWEWQS--ESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSS  411 (893)
T ss_pred             EEEeec--cceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEee
Confidence            444433  344566789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEcccCeeEeeeCCCCC-----------CCCCCCCCC-----CCCccccccceeEeeCCCCcEEEEEEcCCCC
Q psy11015        242 GDKSVHIWQAVINWECLVSNNDND-----------SDLDESKEP-----DESSITLRTPVKELLGHSNVVIAADWLSDGE  305 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~~~-----------~~~~~~~~~-----~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~  305 (360)
                      .||+|+.||+.....-..+..+..           .....+...     ..++...++.+-.+.||.++|.+++|+|.|.
T Consensus       412 LDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~  491 (893)
T KOG0291|consen  412 LDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGS  491 (893)
T ss_pred             cCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccC
Confidence            999999999986654333322211           111111111     1335666778888999999999999999999


Q ss_pred             EEEEEECCCcEEEEECCCC-eEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        306 QVITASWDRVANLFDVETG-TILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       306 ~l~tgs~dg~i~iwd~~~~-~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      .|++||||.+|++||+-.. ..+.++. +...+++++|+|+|.-+|.++..
T Consensus       492 ~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~elaVaTld  541 (893)
T KOG0291|consen  492 LLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKELAVATLD  541 (893)
T ss_pred             eEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCeEEEEEec
Confidence            9999999999999998654 3455565 66789999999999988877643

>KOG0645|consensus

Probab=99.94  E-value=5.8e-25  Score=181.41  Aligned_cols=162  Identities=30%  Similarity=0.446  Sum_probs=141.3

Q ss_pred             eeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCC---CeEEEEE-eCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQT---GKCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~---~~~~~~~-~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      ..++.+.||++.|+.++|+|. |..|+|||.|+.||+|+...   ..|...+ .+|...|++++|+|.|++|++||.|.+
T Consensus         5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t   84 (312)
T KOG0645|consen    5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT   84 (312)
T ss_pred             eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence            457788999999999999998 88999999999999999985   3455555 379999999999999999999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-  324 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-  324 (360)
                      +.||.-..+                          ...++.++.||...|.+++|+++|++|||++.|+.|-||.+..+ 
T Consensus        85 ~~Iw~k~~~--------------------------efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd  138 (312)
T KOG0645|consen   85 VVIWKKEDG--------------------------EFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD  138 (312)
T ss_pred             EEEeecCCC--------------------------ceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC
Confidence            999975533                          23468899999999999999999999999999999999998743 


Q ss_pred             --eEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        325 --TILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       325 --~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                        .++..+..|...|..+.|||...+|+|++ |++||
T Consensus       139 Efec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk  175 (312)
T KOG0645|consen  139 EFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIK  175 (312)
T ss_pred             cEEEEeeeccccccccEEEEcCCcceeEEeccCCeEE
Confidence              57888999999999999999887777655 77775

>KOG0273|consensus

Probab=99.94  E-value=5.4e-25  Score=193.94  Aligned_cols=161  Identities=27%  Similarity=0.441  Sum_probs=144.7

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE---------------------------------
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC---------------------------------  214 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~---------------------------------  214 (360)
                      ..+.++.+|..|+++|.++.|+..|.+|++++.||++.+||..+|..                                 
T Consensus       264 ~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V  343 (524)
T KOG0273|consen  264 KDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHV  343 (524)
T ss_pred             cCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEE
Confidence            56788899999999999999999999999999999999999865532                                 


Q ss_pred             --------EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccccee
Q psy11015        215 --------VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVK  286 (360)
Q Consensus       215 --------~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (360)
                              +.++.||.++|.++.|+|.|.+|+++|.|+|++||.....                            ....
T Consensus       344 ~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~----------------------------~~~~  395 (524)
T KOG0273|consen  344 CKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQS----------------------------NSVH  395 (524)
T ss_pred             EEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCC----------------------------cchh
Confidence                    2456789999999999999999999999999999986544                            3567


Q ss_pred             EeeCCCCcEEEEEEcCCC---------CEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        287 ELLGHSNVVIAADWLSDG---------EQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       287 ~~~~h~~~v~~i~~sp~g---------~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      .+.+|+..|..+.|+|.|         ..+++++.|++|++||+..|.++++|..|..+|.+++|+|+|.++|+++..+
T Consensus       396 ~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg  474 (524)
T KOG0273|consen  396 DLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDG  474 (524)
T ss_pred             hhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCC
Confidence            788999999999999965         4789999999999999999999999999999999999999999999998654

>KOG0295|consensus

Probab=99.93  E-value=3.8e-25  Score=189.26  Aligned_cols=164  Identities=21%  Similarity=0.373  Sum_probs=153.3

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC---------
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN---------  233 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~---------  233 (360)
                      ..|+..++.++.+|.+|...|.-++.+.||.++++|+.|.+|++|-+.++.|...+.+|..+|.+++|.|.         
T Consensus       218 k~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~a  297 (406)
T KOG0295|consen  218 KAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEA  297 (406)
T ss_pred             eEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhc
Confidence            34455788999999999999999999999999999999999999999999999999999999999999883         


Q ss_pred             ------CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE
Q psy11015        234 ------KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV  307 (360)
Q Consensus       234 ------~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l  307 (360)
                            +.++++++.|++|++||+.++                            .++.++.||...|.+++|+|.|+||
T Consensus       298 t~~~~~~~~l~s~SrDktIk~wdv~tg----------------------------~cL~tL~ghdnwVr~~af~p~Gkyi  349 (406)
T KOG0295|consen  298 TGSTNGGQVLGSGSRDKTIKIWDVSTG----------------------------MCLFTLVGHDNWVRGVAFSPGGKYI  349 (406)
T ss_pred             cCCCCCccEEEeecccceEEEEeccCC----------------------------eEEEEEecccceeeeeEEcCCCeEE
Confidence                  258999999999999999887                            4678899999999999999999999


Q ss_pred             EEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        308 ITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       308 ~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      +++..|+++++||+++++|.+++..|..-|+++.|+.+-++++||+-
T Consensus       350 ~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsV  396 (406)
T KOG0295|consen  350 LSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSV  396 (406)
T ss_pred             EEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccc
Confidence            99999999999999999999999999999999999999999999873

>KOG0273|consensus

Probab=99.93  E-value=6.6e-25  Score=193.36  Aligned_cols=158  Identities=22%  Similarity=0.397  Sum_probs=143.8

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC---------EEEEEe
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD---------LVLSAS  241 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~---------~l~s~s  241 (360)
                      .++.++.||.++|.++.|+|.+.+|+|+|.|++++||+...+.+...+++|...|..+.|+|+|.         .+++++
T Consensus       350 ~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas  429 (524)
T KOG0273|consen  350 RPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASAS  429 (524)
T ss_pred             CcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEee
Confidence            57889999999999999999999999999999999999999999999999999999999999643         799999


Q ss_pred             CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        242 GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      .|++|++||+..+                            .+++.|..|..+|.+++|+|+|+|+++|+.||.|++|++
T Consensus       430 ~dstV~lwdv~~g----------------------------v~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~  481 (524)
T KOG0273|consen  430 FDSTVKLWDVESG----------------------------VPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWST  481 (524)
T ss_pred             cCCeEEEEEccCC----------------------------ceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccc
Confidence            9999999999877                            578889999999999999999999999999999999999


Q ss_pred             CCCeEEEEEecCCCceEEEEEcCCCCEEEc-ccccch
Q psy11015        322 ETGTILQSLTEPGEAIRAAAGRTGGPIRAS-PLLLAI  357 (360)
Q Consensus       322 ~~~~~~~~l~~h~~~v~~~~~~~~g~~las-~~~~~i  357 (360)
                      ++++.+++..+ .+.|..++|+-+|..+.. .+|+.+
T Consensus       482 ~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd~~v  517 (524)
T KOG0273|consen  482 KTGKLVKSYQG-TGGIFELCWNAAGDKLGACASDGSV  517 (524)
T ss_pred             cchheeEeecC-CCeEEEEEEcCCCCEEEEEecCCCc
Confidence            99999999975 456999999999876654 445543

>PTZ00421 coronin; Provisional

Probab=99.93  E-value=3.2e-24  Score=202.36  Aligned_cols=151  Identities=25%  Similarity=0.383  Sum_probs=132.9

Q ss_pred             eeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCC-------eEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCC
Q psy11015        174 RSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG-------KCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDK  244 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~-------~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~  244 (360)
                      ..+.||.+.|++++|+| ++++|++||.|++|++||+.++       .++..+.+|...|.+++|+|++ ++|++|+.|+
T Consensus        69 ~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dg  148 (493)
T PTZ00421         69 PILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM  148 (493)
T ss_pred             ceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCC
Confidence            35789999999999999 7889999999999999999765       3577899999999999999985 6999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      +|+|||+.++                            ..+..+.+|...|.+++|+|+|.+|++|+.||+|++||++++
T Consensus       149 tVrIWDl~tg----------------------------~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg  200 (493)
T PTZ00421        149 VVNVWDVERG----------------------------KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDG  200 (493)
T ss_pred             EEEEEECCCC----------------------------eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCC
Confidence            9999999876                            245667789999999999999999999999999999999999


Q ss_pred             eEEEEEecCCCc-eEEEEEcCCCCEEEcc
Q psy11015        325 TILQSLTEPGEA-IRAAAGRTGGPIRASP  352 (360)
Q Consensus       325 ~~~~~l~~h~~~-v~~~~~~~~g~~las~  352 (360)
                      +.+.++.+|.+. +..+.|.+++..++++
T Consensus       201 ~~v~tl~~H~~~~~~~~~w~~~~~~ivt~  229 (493)
T PTZ00421        201 TIVSSVEAHASAKSQRCLWAKRKDLIITL  229 (493)
T ss_pred             cEEEEEecCCCCcceEEEEcCCCCeEEEE
Confidence            999999988765 4567888887766654

>KOG0645|consensus

Probab=99.93  E-value=9e-24  Score=174.41  Aligned_cols=181  Identities=26%  Similarity=0.299  Sum_probs=155.2

Q ss_pred             eeeecCCeEEEeeecC-ccceeeeeee-ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--eEEEEEeCCCcCeE
Q psy11015        151 KLKVQTSKIVSSFKTS-LLSCYKIRSF-SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVN  226 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~-~~~~~~~~~l-~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~~~h~~~v~  226 (360)
                      ...+.+.+.+..|... ..+..+...+ .+|+..|.+++|+|.|++|++||.|.++.||.-..+  +++.++.||...|.
T Consensus        30 lAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK  109 (312)
T KOG0645|consen   30 LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVK  109 (312)
T ss_pred             EEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeecccccee
Confidence            3445666667667665 3445566555 469999999999999999999999999999987655  79999999999999


Q ss_pred             EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCE
Q psy11015        227 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ  306 (360)
Q Consensus       227 ~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~  306 (360)
                      |++|+++|++||+|+.|+.|-||.+..+.+.                         .+...+.+|+..|..+.|+|....
T Consensus       110 ~Vaws~sG~~LATCSRDKSVWiWe~deddEf-------------------------ec~aVL~~HtqDVK~V~WHPt~dl  164 (312)
T KOG0645|consen  110 CVAWSASGNYLATCSRDKSVWIWEIDEDDEF-------------------------ECIAVLQEHTQDVKHVIWHPTEDL  164 (312)
T ss_pred             EEEEcCCCCEEEEeeCCCeEEEEEecCCCcE-------------------------EEEeeeccccccccEEEEcCCcce
Confidence            9999999999999999999999998754322                         357889999999999999999999


Q ss_pred             EEEEECCCcEEEEECC---CCeEEEEEecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        307 VITASWDRVANLFDVE---TGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       307 l~tgs~dg~i~iwd~~---~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      |+++|.|.+|++|+-.   ...+++++.+|...|.+++|++.|..++++++.+
T Consensus       165 L~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~  217 (312)
T KOG0645|consen  165 LFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDG  217 (312)
T ss_pred             eEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCc
Confidence            9999999999999866   3468999999999999999999998888777543

>KOG0319|consensus

Probab=99.93  E-value=4.2e-25  Score=204.05  Aligned_cols=152  Identities=24%  Similarity=0.389  Sum_probs=144.7

Q ss_pred             eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      +-..|...|+|++++|+..+++|||.|++++||+++......++.||...|+|+.|+|..+.++|+|.|+||+||.+.+.
T Consensus       458 t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f  537 (775)
T KOG0319|consen  458 TERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF  537 (775)
T ss_pred             HHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccc
Confidence            45689999999999999999999999999999999999999999999999999999999999999999999999998765


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCC
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~  334 (360)
                                                  .++.++.||...|..+.|-.+|.+|++++.||.|++|++.++.|+.++.+|.
T Consensus       538 ----------------------------SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~  589 (775)
T KOG0319|consen  538 ----------------------------SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHN  589 (775)
T ss_pred             ----------------------------eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhcc
Confidence                                        5789999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEcCCCCEEEcccc
Q psy11015        335 EAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       335 ~~v~~~~~~~~g~~las~~~  354 (360)
                      +.|++++.+|.+..++||..
T Consensus       590 DrvWaL~~~~~~~~~~tgg~  609 (775)
T KOG0319|consen  590 DRVWALSVSPLLDMFVTGGG  609 (775)
T ss_pred             ceeEEEeecCccceeEecCC
Confidence            99999999999998887664

>KOG0284|consensus

Probab=99.92  E-value=3e-25  Score=192.39  Aligned_cols=179  Identities=17%  Similarity=0.236  Sum_probs=150.0

Q ss_pred             eeeeeeeecCCeEEEeee------cCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy11015        147 KTTNKLKVQTSKIVSSFK------TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG  220 (360)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~  220 (360)
                      ...-.|.+...+++....      |....+..-..+++|..+|.++.|++++.+++||+.+|.|++|+..-. .++.+++
T Consensus        99 V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-nVk~~~a  177 (464)
T KOG0284|consen   99 VNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-NVKIIQA  177 (464)
T ss_pred             eeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh-hhHHhhH
Confidence            334556666555554222      222344444456899999999999999999999999999999997644 3455555


Q ss_pred             CC-cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEE
Q psy11015        221 HS-GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD  299 (360)
Q Consensus       221 h~-~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~  299 (360)
                      |. ..|++++|+|....|+++|.||+|+|||....                            ++-..+.||.-.|.+++
T Consensus       178 hh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~----------------------------kee~vL~GHgwdVksvd  229 (464)
T KOG0284|consen  178 HHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMP----------------------------KEERVLRGHGWDVKSVD  229 (464)
T ss_pred             hhhhhhheeccCCCCceeEEecCCCeEEEEeccCC----------------------------chhheeccCCCCcceec
Confidence            55 89999999999999999999999999998755                            34556789999999999


Q ss_pred             EcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        300 WLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       300 ~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      |+|....|++||.|..|++||.++|.|+.++.+|...|.++.|+|++++|+|++.
T Consensus       230 WHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~sk  284 (464)
T KOG0284|consen  230 WHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSK  284 (464)
T ss_pred             cCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccC
Confidence            9999999999999999999999999999999999999999999999999999884

>KOG0284|consensus

Probab=99.92  E-value=1.3e-25  Score=194.64  Aligned_cols=174  Identities=21%  Similarity=0.351  Sum_probs=150.1

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCC-CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~  231 (360)
                      .|+.+..+..|.+..   ..++.+.+|. ..|.+++|+|....++|+|.||+|+|||....+....+.||.-.|.+++|+
T Consensus       155 SgD~gG~iKyWqpnm---nnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWH  231 (464)
T KOG0284|consen  155 SGDKGGMIKYWQPNM---NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWH  231 (464)
T ss_pred             EcCCCceEEecccch---hhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccC
Confidence            455555665665543   3445556655 899999999999999999999999999999998888899999999999999


Q ss_pred             eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                      |...++++||.|..|++||.+++                            .++.++.+|...|..+.|+|++++|+|+|
T Consensus       232 P~kgLiasgskDnlVKlWDprSg----------------------------~cl~tlh~HKntVl~~~f~~n~N~Llt~s  283 (464)
T KOG0284|consen  232 PTKGLIASGSKDNLVKLWDPRSG----------------------------SCLATLHGHKNTVLAVKFNPNGNWLLTGS  283 (464)
T ss_pred             CccceeEEccCCceeEeecCCCc----------------------------chhhhhhhccceEEEEEEcCCCCeeEEcc
Confidence            99999999999999999999987                            56788999999999999999999999999


Q ss_pred             CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCC-CEEEc-ccccch
Q psy11015        312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG-PIRAS-PLLLAI  357 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g-~~las-~~~~~i  357 (360)
                      .|..++++|+++.+.+.++++|...|++++|+|-. .++++ ++|+.|
T Consensus       284 kD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsv  331 (464)
T KOG0284|consen  284 KDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSV  331 (464)
T ss_pred             CCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCce
Confidence            99999999999999999999999999999999954 34444 345543

>KOG0266|consensus

Probab=99.92  E-value=1.8e-23  Score=197.45  Aligned_cols=174  Identities=28%  Similarity=0.440  Sum_probs=149.0

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      +..+..+.+|.. ...+..++++.||...|++++|+|+++++++|+.|++|+|||+++++++..+.+|.+.|++++|+++
T Consensus       221 ~s~D~tiriwd~-~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d  299 (456)
T KOG0266|consen  221 GSDDKTLRIWDL-KDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPD  299 (456)
T ss_pred             ecCCceEEEeec-cCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCC
Confidence            444444445554 3667899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC--cEEEEEEcCCCCEEEEEE
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVITAS  311 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~i~~sp~g~~l~tgs  311 (360)
                      +.+|++++.|+.|++||+.++...                          ++..+.++..  .+++++|+|+|.++++++
T Consensus       300 ~~~l~s~s~d~~i~vwd~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~  353 (456)
T KOG0266|consen  300 GNLLVSASYDGTIRVWDLETGSKL--------------------------CLKLLSGAENSAPVTSVQFSPNGKYLLSAS  353 (456)
T ss_pred             CCEEEEcCCCccEEEEECCCCcee--------------------------eeecccCCCCCCceeEEEECCCCcEEEEec
Confidence            999999999999999999887311                          2345555554  499999999999999999


Q ss_pred             CCCcEEEEECCCCeEEEEEecCCCce---EEEEEcCCCCEEEcccc
Q psy11015        312 WDRVANLFDVETGTILQSLTEPGEAI---RAAAGRTGGPIRASPLL  354 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~~~v---~~~~~~~~g~~las~~~  354 (360)
                      .|+.+++||+..+.++..+.+|...+   .+...+++|.++.++..
T Consensus       354 ~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~  399 (456)
T KOG0266|consen  354 LDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSE  399 (456)
T ss_pred             CCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeC
Confidence            99999999999999999999987753   34445778998888774

>KOG0276|consensus

Probab=99.92  E-value=6e-24  Score=193.13  Aligned_cols=177  Identities=23%  Similarity=0.295  Sum_probs=158.2

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~  230 (360)
                      +.+++.-.+..|.|. ....+.++|.||+.-|++++|+|. .+.++|||-|++|+||.+.+..+..+++||...|+|++|
T Consensus       113 LtsSDDm~iKlW~we-~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdy  191 (794)
T KOG0276|consen  113 LTSSDDMTIKLWDWE-NEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDY  191 (794)
T ss_pred             EecCCccEEEEeecc-CceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEe
Confidence            345555566667765 456788999999999999999995 459999999999999999999999999999999999999


Q ss_pred             eeCC--CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015        231 LPNK--DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI  308 (360)
Q Consensus       231 ~p~~--~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~  308 (360)
                      -+.|  .++++|+.|.+++|||.++.                            ++++++.||...|..+.|+|.-..++
T Consensus       192 y~~gdkpylIsgaDD~tiKvWDyQtk----------------------------~CV~TLeGHt~Nvs~v~fhp~lpiii  243 (794)
T KOG0276|consen  192 YTGGDKPYLISGADDLTIKVWDYQTK----------------------------SCVQTLEGHTNNVSFVFFHPELPIII  243 (794)
T ss_pred             ccCCCcceEEecCCCceEEEeecchH----------------------------HHHHHhhcccccceEEEecCCCcEEE
Confidence            8755  69999999999999998765                            68899999999999999999999999


Q ss_pred             EEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccch
Q psy11015        309 TASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       309 tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      |||.||+++||+..|-+...++...-..|+|++-.+++..++.|.|.++
T Consensus       244 sgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~  292 (794)
T KOG0276|consen  244 SGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGS  292 (794)
T ss_pred             EecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCc
Confidence            9999999999999999888888888889999999998888999988764

>PTZ00420 coronin; Provisional

Probab=99.91  E-value=9.4e-23  Score=193.60  Aligned_cols=155  Identities=16%  Similarity=0.217  Sum_probs=129.7

Q ss_pred             eeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCC--------eEEEEEeCCCcCeEEEEEeeCCCE-EEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTG--------KCVLQYSGHSGSVNSVRFLPNKDL-VLS  239 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~--------~~~~~~~~h~~~v~~i~~~p~~~~-l~s  239 (360)
                      ...+..+.+|.+.|++++|+|+ +.+|+|||.||+|+|||+.++        .++..+.+|...|.+++|+|++.. +++
T Consensus        64 ~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaS  143 (568)
T PTZ00420         64 KPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCS  143 (568)
T ss_pred             CceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEE
Confidence            4577889999999999999997 789999999999999999764        244578899999999999999875 578


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEE
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF  319 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iw  319 (360)
                      |+.|++|++||+.++..                            ...+. |...|.+++|+|+|.+|++++.|+.|+||
T Consensus       144 gS~DgtIrIWDl~tg~~----------------------------~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIw  194 (568)
T PTZ00420        144 SGFDSFVNIWDIENEKR----------------------------AFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHII  194 (568)
T ss_pred             EeCCCeEEEEECCCCcE----------------------------EEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEE
Confidence            99999999999987632                            23333 55789999999999999999999999999


Q ss_pred             ECCCCeEEEEEecCCCceEEE-----EEcCCCCEEEccc
Q psy11015        320 DVETGTILQSLTEPGEAIRAA-----AGRTGGPIRASPL  353 (360)
Q Consensus       320 d~~~~~~~~~l~~h~~~v~~~-----~~~~~g~~las~~  353 (360)
                      |+++++.+.++.+|.+.+.+.     .|++++.+++|++
T Consensus       195 D~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG  233 (568)
T PTZ00420        195 DPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTG  233 (568)
T ss_pred             ECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEE
Confidence            999999999999998765433     3457877766644

>KOG0318|consensus

Probab=99.91  E-value=6.5e-23  Score=183.13  Aligned_cols=210  Identities=19%  Similarity=0.231  Sum_probs=166.2

Q ss_pred             eeeeeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe---CCCc
Q psy11015        147 KTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS---GHSG  223 (360)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~---~h~~  223 (360)
                      ++.+...+.....+..|..  ...+.-.+++.|..-|.|+.|+|||.+++|+|.||+|.+||-.+|+.+..+.   +|.+
T Consensus       159 RPfRi~T~sdDn~v~ffeG--PPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkG  236 (603)
T KOG0318|consen  159 RPFRIATGSDDNTVAFFEG--PPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKG  236 (603)
T ss_pred             CceEEEeccCCCeEEEeeC--CCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccc
Confidence            3344444555555555543  3455667888999999999999999999999999999999999999999998   8999


Q ss_pred             CeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC----CCCC------CCC-----ccccccceeEe
Q psy11015        224 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE----SKEP------DES-----SITLRTPVKEL  288 (360)
Q Consensus       224 ~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~----~~~~------~~~-----~~~~~~~~~~~  288 (360)
                      .|.+++|+||+..++++|.|.+++|||+.++................    +...      ..+     ......+...+
T Consensus       237 sIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i  316 (603)
T KOG0318|consen  237 SIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVI  316 (603)
T ss_pred             cEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhhee
Confidence            99999999999999999999999999999885544433332211000    0000      000     11223367888


Q ss_pred             eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE-ecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-TEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       289 ~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l-~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      .||...|++++.+|++.+|++|+.||.|.-||..+|..-... ..|...|.+++-+..+.++..++|..+|
T Consensus       317 ~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~  387 (603)
T KOG0318|consen  317 SGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLR  387 (603)
T ss_pred             cccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEE
Confidence            999999999999999999999999999999999988765544 6799999999999889999999998876

>KOG0282|consensus

Probab=99.91  E-value=2.2e-24  Score=190.74  Aligned_cols=198  Identities=21%  Similarity=0.308  Sum_probs=151.5

Q ss_pred             EEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC-CEE
Q psy11015        159 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLV  237 (360)
Q Consensus       159 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~-~~l  237 (360)
                      .+.+|.... .+.++++|.||..+|.+++|+.+|..++|+|.|+.+++||+++|+++..+. ....+.|+.|+|++ +.|
T Consensus       238 ~vklW~vy~-~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~f  315 (503)
T KOG0282|consen  238 LVKLWNVYD-DRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIF  315 (503)
T ss_pred             eEEEEEEec-CcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEE
Confidence            333444333 688999999999999999999999999999999999999999999999997 45678999999998 889


Q ss_pred             EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCC---------CCCCCccccc--------------------------
Q psy11015        238 LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESK---------EPDESSITLR--------------------------  282 (360)
Q Consensus       238 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~--------------------------  282 (360)
                      ++|+.|+.|+.||++++..+..+..+..+......         +.++.....|                          
T Consensus       316 l~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P  395 (503)
T KOG0282|consen  316 LVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHP  395 (503)
T ss_pred             EEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCC
Confidence            99999999999999987644433333111111100         0000000000                          


Q ss_pred             -------------------------cceeEeeCCC--CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCC
Q psy11015        283 -------------------------TPVKELLGHS--NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE  335 (360)
Q Consensus       283 -------------------------~~~~~~~~h~--~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~  335 (360)
                                               ..-..+.||.  +.-..+.|||||++|++|+.||.+.+||.++.+.+..+.+|.+
T Consensus       396 ~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~  475 (503)
T KOG0282|consen  396 NGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQ  475 (503)
T ss_pred             CCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCc
Confidence                                     0223445663  4566789999999999999999999999999999999999999


Q ss_pred             ceEEEEEcCCC--CEEEcccccchh
Q psy11015        336 AIRAAAGRTGG--PIRASPLLLAIR  358 (360)
Q Consensus       336 ~v~~~~~~~~g--~~las~~~~~ir  358 (360)
                      ++..+.|||..  .+++++.++.|+
T Consensus       476 ~ci~v~wHP~e~Skvat~~w~G~Ik  500 (503)
T KOG0282|consen  476 PCIGVDWHPVEPSKVATCGWDGLIK  500 (503)
T ss_pred             ceEEEEecCCCcceeEecccCceeE
Confidence            99999999965  455566677664

>KOG0296|consensus

Probab=99.91  E-value=8.4e-23  Score=175.01  Aligned_cols=204  Identities=16%  Similarity=0.201  Sum_probs=159.8

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE----------------
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC----------------  214 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~----------------  214 (360)
                      .|.+..+.--.+|.|...++....++.||++.|.++.|+.+|.+||||+.+|.|+||...++..                
T Consensus        77 ~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~W  156 (399)
T KOG0296|consen   77 NLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKW  156 (399)
T ss_pred             ceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEe
Confidence            3444444444567788888889999999999999999999999999999999999999887632                


Q ss_pred             --------------------------EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCC
Q psy11015        215 --------------------------VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDL  268 (360)
Q Consensus       215 --------------------------~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~  268 (360)
                                                .+.+.||..++++-.|.|+|+.++++..||+|++|+..++..............
T Consensus       157 Hp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~  236 (399)
T KOG0296|consen  157 HPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLEL  236 (399)
T ss_pred             cccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcC
Confidence                                      234568999999999999999999999999999999999877666552210000


Q ss_pred             CCC--------------------------------C--C-----------------CCC------------Cc-----cc
Q psy11015        269 DES--------------------------------K--E-----------------PDE------------SS-----IT  280 (360)
Q Consensus       269 ~~~--------------------------------~--~-----------------~~~------------~~-----~~  280 (360)
                      ...                                .  .                 +..            ..     ..
T Consensus       237 ~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a  316 (399)
T KOG0296|consen  237 PCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLA  316 (399)
T ss_pred             CccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecc
Confidence            000                                0  0                 000            00     00


Q ss_pred             cccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       281 ~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      .. .++....|...|..+.|.+ ..+|+|++.||.|+.||.++|+++.++.+|..+|.+++.+|++++++|+++..
T Consensus       317 ~~-~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~  390 (399)
T KOG0296|consen  317 AS-TLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDN  390 (399)
T ss_pred             cc-hhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCC
Confidence            01 2334446888999999988 78999999999999999999999999999999999999999999999988653

>KOG0281|consensus

Probab=99.90  E-value=2.9e-24  Score=182.91  Aligned_cols=160  Identities=24%  Similarity=0.346  Sum_probs=129.6

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      +..+..+++.+.||+|.|.|+.|.  .+.++|||.|.+|+|||+++|+++.++-+|...|..+.|+  ..+++++|.|.+
T Consensus       223 D~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrs  298 (499)
T KOG0281|consen  223 DKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRS  298 (499)
T ss_pred             ccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCce
Confidence            335667888999999999999998  4599999999999999999999999999999999999996  458999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      +.|||+.....                         .+....+.||...|+.+.|  +.++++++|.|++|++|++.++.
T Consensus       299 iaVWdm~sps~-------------------------it~rrVLvGHrAaVNvVdf--d~kyIVsASgDRTikvW~~st~e  351 (499)
T KOG0281|consen  299 IAVWDMASPTD-------------------------ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE  351 (499)
T ss_pred             eEEEeccCchH-------------------------HHHHHHHhhhhhheeeecc--ccceEEEecCCceEEEEecccee
Confidence            99999875521                         1345566778888888887  45688888888888888888888


Q ss_pred             EEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        326 ILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ++.++.+|...|.|+.+  +|+++++|+ |++||
T Consensus       352 fvRtl~gHkRGIAClQY--r~rlvVSGSSDntIR  383 (499)
T KOG0281|consen  352 FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIR  383 (499)
T ss_pred             eehhhhcccccceehhc--cCeEEEecCCCceEE
Confidence            88888888777766654  466666554 66666

>KOG0316|consensus

Probab=99.90  E-value=1.3e-22  Score=164.54  Aligned_cols=173  Identities=27%  Similarity=0.413  Sum_probs=149.7

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      ....+.+..|++  ..+.+++++.||...|..++.+.|...+++|+.|+.|.+||+.+|+.++.|.+|.+.|+.++|+.+
T Consensus        35 cGsdrtvrLWNp--~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNee  112 (307)
T KOG0316|consen   35 CGSDRTVRLWNP--LRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEE  112 (307)
T ss_pred             cCCCceEEeecc--cccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCc
Confidence            334445545554  578899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  313 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d  313 (360)
                      ...+++||.|.++++||-++.                          ...|++.+......|.++..  .+..|++||.|
T Consensus       113 sSVv~SgsfD~s~r~wDCRS~--------------------------s~ePiQildea~D~V~Si~v--~~heIvaGS~D  164 (307)
T KOG0316|consen  113 SSVVASGSFDSSVRLWDCRSR--------------------------SFEPIQILDEAKDGVSSIDV--AEHEIVAGSVD  164 (307)
T ss_pred             ceEEEeccccceeEEEEcccC--------------------------CCCccchhhhhcCceeEEEe--cccEEEeeccC
Confidence            999999999999999998765                          34578888888889999988  57789999999


Q ss_pred             CcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEcccccchh
Q psy11015        314 RVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPLLLAIR  358 (360)
Q Consensus       314 g~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~~~~ir  358 (360)
                      |+++.||++.|+...-.  -..+|+++.|+++|+ .+|++.++.+|
T Consensus       165 GtvRtydiR~G~l~sDy--~g~pit~vs~s~d~nc~La~~l~stlr  208 (307)
T KOG0316|consen  165 GTVRTYDIRKGTLSSDY--FGHPITSVSFSKDGNCSLASSLDSTLR  208 (307)
T ss_pred             CcEEEEEeecceeehhh--cCCcceeEEecCCCCEEEEeeccceee
Confidence            99999999999865444  456899999999998 56677777776

>KOG0316|consensus

Probab=99.90  E-value=4e-23  Score=167.43  Aligned_cols=159  Identities=22%  Similarity=0.330  Sum_probs=146.4

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      ..+.+.+|+++|.++.|+-+|++.++++.|++|++|+...|.++++|.+|...|..++.+.|...|++|+.|+.+.+||+
T Consensus         9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV   88 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV   88 (307)
T ss_pred             hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence            45677899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC--CeEEEE
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET--GTILQS  329 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~--~~~~~~  329 (360)
                      .+|                            +....+.+|.+.|+.++|+.+...+++||.|.++++||.++  .++++.
T Consensus        89 ~TG----------------------------kv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQi  140 (307)
T KOG0316|consen   89 NTG----------------------------KVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQI  140 (307)
T ss_pred             ccC----------------------------eeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccch
Confidence            988                            45778999999999999999999999999999999999985  468888


Q ss_pred             EecCCCceEEEEEcCCCCEEEcccccchhc
Q psy11015        330 LTEPGEAIRAAAGRTGGPIRASPLLLAIRS  359 (360)
Q Consensus       330 l~~h~~~v~~~~~~~~g~~las~~~~~ir~  359 (360)
                      +......|.++... +-.+++.+.|+++|+
T Consensus       141 ldea~D~V~Si~v~-~heIvaGS~DGtvRt  169 (307)
T KOG0316|consen  141 LDEAKDGVSSIDVA-EHEIVAGSVDGTVRT  169 (307)
T ss_pred             hhhhcCceeEEEec-ccEEEeeccCCcEEE
Confidence            88888899999876 556788888999886

>KOG0283|consensus

Probab=99.90  E-value=1.6e-23  Score=196.72  Aligned_cols=155  Identities=19%  Similarity=0.345  Sum_probs=129.4

Q ss_pred             eeeeeeee-cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC--------------------------------C----
Q psy11015        170 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--------------------------------G----  212 (360)
Q Consensus       170 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~--------------------------------~----  212 (360)
                      ....+.+. +|.+.||++.|++||++|||||.|+.|+||.+..                                .    
T Consensus       256 l~~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~  335 (712)
T KOG0283|consen  256 LTVVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSR  335 (712)
T ss_pred             eEEeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccc
Confidence            34556677 8999999999999999999999999999998754                                0    


Q ss_pred             ------------------------eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCC
Q psy11015        213 ------------------------KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDL  268 (360)
Q Consensus       213 ------------------------~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~  268 (360)
                                              ++++.|.||.+.|.++.|+. .++|+++|+|+||++|++...              
T Consensus       336 ~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~--------------  400 (712)
T KOG0283|consen  336 TSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRK--------------  400 (712)
T ss_pred             ccccccccCCccccCCCccccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCc--------------
Confidence                                    12344679999999999995 568999999999999998755              


Q ss_pred             CCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC
Q psy11015        269 DESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP  347 (360)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~  347 (360)
                                    .++..| .|...|+|++|+| |.+||++||.||.+|||++...+.+.-...+ .-|++++|.|+|+
T Consensus       401 --------------~CL~~F-~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~-~lITAvcy~PdGk  464 (712)
T KOG0283|consen  401 --------------ECLKVF-SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR-DLITAVCYSPDGK  464 (712)
T ss_pred             --------------ceeeEE-ecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhh-hhheeEEeccCCc
Confidence                          344445 5999999999999 7789999999999999999877766555544 7899999999999


Q ss_pred             EEEccccc
Q psy11015        348 IRASPLLL  355 (360)
Q Consensus       348 ~las~~~~  355 (360)
                      +.+-|+..
T Consensus       465 ~avIGt~~  472 (712)
T KOG0283|consen  465 GAVIGTFN  472 (712)
T ss_pred             eEEEEEec
Confidence            88777643

>KOG1407|consensus

Probab=99.90  E-value=1.2e-23  Score=172.93  Aligned_cols=180  Identities=25%  Similarity=0.323  Sum_probs=150.8

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE--EEeCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd  250 (360)
                      +.+++|.+.|.+++|+.+|..|++|+.|+++++|+++.++.+.  .+.+|.+.|-.++|+| ..++|++++.|++|++||
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd   93 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD   93 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence            6788999999999999999999999999999999998775444  3568999999999987 457999999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCC------------------------------------------------------C
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPD------------------------------------------------------E  276 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------~  276 (360)
                      ++.+.++..+............+..                                                      .
T Consensus        94 ~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~I  173 (313)
T KOG1407|consen   94 IRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEI  173 (313)
T ss_pred             eccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEE
Confidence            9999888776555332222111110                                                      0


Q ss_pred             CccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        277 SSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       277 ~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      -.....+|+..+..|.....+|.|+|+|+|||+|+.|..+-+||+...-|+..+..+.=+|..+.|+.+|++||+|+
T Consensus       174 LsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaS  250 (313)
T KOG1407|consen  174 LSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASAS  250 (313)
T ss_pred             EeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccC
Confidence            01122347888899999999999999999999999999999999999999999999999999999999999999987

>KOG0313|consensus

Probab=99.90  E-value=5.6e-23  Score=176.91  Aligned_cols=164  Identities=23%  Similarity=0.387  Sum_probs=146.7

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ....++.++.||+++|.++.|++ ...++|+|.|.+|+.||+.++.+...+. ....++|+.++|...+|++|+.|..++
T Consensus       248 ~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~ir  325 (423)
T KOG0313|consen  248 GTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIR  325 (423)
T ss_pred             cccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeee-cCcceeEeecccccceeeecCCCCcee
Confidence            34567889999999999999999 5599999999999999999999998888 467899999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEECCCcEEEEECCCCe-
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGT-  325 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~dg~i~iwd~~~~~-  325 (360)
                      +||.+++...                         -+.+++.||.+.|.++.|+|... +|++|+.|+++++||+++.+ 
T Consensus       326 l~DPR~~~gs-------------------------~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~  380 (423)
T KOG0313|consen  326 LWDPRTGDGS-------------------------VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA  380 (423)
T ss_pred             ecCCCCCCCc-------------------------eeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC
Confidence            9999987322                         24788999999999999999765 57899999999999999887 


Q ss_pred             EEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        326 ILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      ++..+.+|...|.++.|+..+-++..|.|..||
T Consensus       381 plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~  413 (423)
T KOG0313|consen  381 PLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLR  413 (423)
T ss_pred             cceeeccCCceEEEEeccCCceEEeccCcceEE
Confidence            899999999999999999887888888888876

>KOG0650|consensus

Probab=99.90  E-value=6.9e-23  Score=185.47  Aligned_cols=246  Identities=21%  Similarity=0.301  Sum_probs=184.1

Q ss_pred             hHHHHHHHHhhcccccccccccCCCCCCcchhhcccc---CcccccccccCCCcccceeeeeeeecCCeEEEeeecCccc
Q psy11015         93 NLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNK---NFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLS  169 (360)
Q Consensus        93 ~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (360)
                      .+++|+..|+.++++.+.+.++|.||++++++++..+   +.+++.+++++|++...++              |..    
T Consensus       329 F~P~ky~sLR~VPaY~r~irErFeRcLDLYL~PR~rK~rlniDpe~LiPkLPsp~dLrP--------------FPt----  390 (733)
T KOG0650|consen  329 FIPQKYKSLRKVPAYERSIRERFERCLDLYLAPRVRKMRLNIDPESLIPKLPSPKDLRP--------------FPT----  390 (733)
T ss_pred             cccccchhhhcchhHHHHHHHHHHHhHHhhhCcccccceecCCHHHhcccCCChhhcCC--------------Ccc----
Confidence            3899999999999999999999999999999998866   7788889999999999888              332    


Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCE-EEEEeCCCcEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-VLSASGDKSVHI  248 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~-l~s~s~d~~i~v  248 (360)
                       .+-..|.||++.|.|++.+|.|.+|++|+.||+||||.+.+|+|+..++ ..+.|.||+|+|.++. ++++..+..+.|
T Consensus       391 -~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~i  468 (733)
T KOG0650|consen  391 -RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLI  468 (733)
T ss_pred             -eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEE
Confidence             3556789999999999999999999999999999999999999999998 6779999999997752 333444444666


Q ss_pred             EEcccCeeEeeeCCC---CCCC-CCCCC-CCCCCccc----cccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcE
Q psy11015        249 WQAVINWECLVSNND---NDSD-LDESK-EPDESSIT----LRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVA  316 (360)
Q Consensus       249 wd~~~~~~~~~~~~~---~~~~-~~~~~-~~~~~~~~----~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i  316 (360)
                      -+..-|.........   ...+ ..... ....|...    ...-++....|...|..+.|+..|+||+|..-+   ..|
T Consensus       469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~V  548 (733)
T KOG0650|consen  469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSV  548 (733)
T ss_pred             eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceE
Confidence            665444221111100   0000 00000 00011100    111234555688999999999999999987654   458


Q ss_pred             EEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        317 NLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       317 ~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      .|+++..+.....|..-.+.|.++.|||...+++-++...||
T Consensus       549 liHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vR  590 (733)
T KOG0650|consen  549 LIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVR  590 (733)
T ss_pred             EEEecccccccCchhhcCCceeEEEecCCCceEEEEeccceE
Confidence            899988776666666667889999999999988877766655

>KOG0265|consensus

Probab=99.90  E-value=6.6e-22  Score=165.61  Aligned_cols=186  Identities=22%  Similarity=0.281  Sum_probs=136.9

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSV  246 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i  246 (360)
                      ..+.-.-.++||.+.|+.+.|.++++.++++|.|++|+.||+++|+++..+++|.+.|+++.-+..|. ++.+|+.|+++
T Consensus        78 gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~  157 (338)
T KOG0265|consen   78 GDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTL  157 (338)
T ss_pred             ccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceE
Confidence            45666777889999999999999999999999999999999999999999999999999998665554 66788999999


Q ss_pred             EEEEcccCeeEeee----------CCCCCCCCCCCCC---CCCCcccccc------------------------------
Q psy11015        247 HIWQAVINWECLVS----------NNDNDSDLDESKE---PDESSITLRT------------------------------  283 (360)
Q Consensus       247 ~vwd~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~~~~~~------------------------------  283 (360)
                      +|||+++......+          .............   ...+.+....                              
T Consensus       158 kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd  237 (338)
T KOG0265|consen  158 KLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMD  237 (338)
T ss_pred             EEEeecccchhhccccceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCcccccccc
Confidence            99999843222111          1111110000000   0111111112                              


Q ss_pred             ----------------ceeEeeCCCC----cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEc
Q psy11015        284 ----------------PVKELLGHSN----VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR  343 (360)
Q Consensus       284 ----------------~~~~~~~h~~----~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~  343 (360)
                                      ++..+.+|..    ....++|+|+++.+..|+.|+.+++||......+..+.+|.+.|.+++|+
T Consensus       238 ~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fh  317 (338)
T KOG0265|consen  238 NTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFH  317 (338)
T ss_pred             ceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeec
Confidence                            2333444322    23456688888888888999999999988888899999999999999999


Q ss_pred             CCCCEEEccc
Q psy11015        344 TGGPIRASPL  353 (360)
Q Consensus       344 ~~g~~las~~  353 (360)
                      |..+++.+..
T Consensus       318 p~e~iils~~  327 (338)
T KOG0265|consen  318 PTEPIILSCS  327 (338)
T ss_pred             CCCcEEEEec
Confidence            9999877654

>KOG0292|consensus

Probab=99.90  E-value=1.7e-22  Score=190.20  Aligned_cols=205  Identities=21%  Similarity=0.272  Sum_probs=163.6

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~  230 (360)
                      ..+|.+.+.+.+|+..  ..+++.++.||-+-|..+.|++.-++++|+|.|.+|+||+..+++|+..+.||...|.|..|
T Consensus        66 FVSGGDDykIkVWnYk--~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqF  143 (1202)
T KOG0292|consen   66 FVSGGDDYKIKVWNYK--TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQF  143 (1202)
T ss_pred             EEecCCccEEEEEecc--cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeecc
Confidence            3456667777666654  56789999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCC--------CCCCCCC---------------------CCCC-------
Q psy11015        231 LPNKDLVLSASGDKSVHIWQAVINWECLVSNND--------NDSDLDE---------------------SKEP-------  274 (360)
Q Consensus       231 ~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~--------~~~~~~~---------------------~~~~-------  274 (360)
                      +|..++++|+|-|.+|+|||+..-+........        .......                     +..+       
T Consensus       144 hptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVS  223 (1202)
T KOG0292|consen  144 HPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVS  223 (1202)
T ss_pred             CCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEe
Confidence            999999999999999999998643222211110        0000000                     0000       


Q ss_pred             --CCCcccccc-------ceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCC
Q psy11015        275 --DESSITLRT-------PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       275 --~~~~~~~~~-------~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~  345 (360)
                        .+.....|+       .+-+..||.+.|.++-|+|..+++++.|.|++|+|||+.....+++++...+.-+.++.||.
T Consensus       224 G~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~  303 (1202)
T KOG0292|consen  224 GADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPE  303 (1202)
T ss_pred             cCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCC
Confidence              000111111       34566799999999999999999999999999999999999999999988889999999999


Q ss_pred             CCEEEcccccch
Q psy11015        346 GPIRASPLLLAI  357 (360)
Q Consensus       346 g~~las~~~~~i  357 (360)
                      ++++|+|-|+++
T Consensus       304 lNLfAAgHDsGm  315 (1202)
T KOG0292|consen  304 LNLFAAGHDSGM  315 (1202)
T ss_pred             cceeeeecCCce
Confidence            999999988764

>KOG0643|consensus

Probab=99.90  E-value=2.1e-22  Score=166.04  Aligned_cols=181  Identities=18%  Similarity=0.236  Sum_probs=151.7

Q ss_pred             eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      -+.||..+++.+.++.+|.+|+|++.|.++.||-...|+.+.+|.||++.|+|+..+-+.+.+++|+.|.++++||+.+|
T Consensus         5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG   84 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG   84 (327)
T ss_pred             ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence            36799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEeeeCCCCCCCCCCCCC-------------------------CCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        255 WECLVSNNDNDSDLDESKE-------------------------PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      ...................                         ..........|...+..+.+.++.+-|.|-+++|++
T Consensus        85 k~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~  164 (327)
T KOG0643|consen   85 KQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIA  164 (327)
T ss_pred             cEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEE
Confidence            8876654431111000000                         001122234567778788899999999999999999


Q ss_pred             EECCCcEEEEECCCC-eEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        310 ASWDRVANLFDVETG-TILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       310 gs~dg~i~iwd~~~~-~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      |..||.|.+||+++| +.+.+...|...|+++.++++..+++|++..
T Consensus       165 Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~D  211 (327)
T KOG0643|consen  165 GHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKD  211 (327)
T ss_pred             ecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccC
Confidence            999999999999998 4566778899999999999999999998854

>KOG0643|consensus

Probab=99.90  E-value=2.6e-22  Score=165.52  Aligned_cols=166  Identities=25%  Similarity=0.294  Sum_probs=126.2

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC-------------------------
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG-------------------------  220 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-------------------------  220 (360)
                      ....|..+-++.||++.|||+..+.+...++||++|.++++||+++|+++..++.                         
T Consensus        38 ~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg  117 (327)
T KOG0643|consen   38 YSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMG  117 (327)
T ss_pred             EecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcC
Confidence            3457889999999999999999999999999999999999999999988876641                         


Q ss_pred             ----------------------------CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCC
Q psy11015        221 ----------------------------HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESK  272 (360)
Q Consensus       221 ----------------------------h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~  272 (360)
                                                  +.+.++.+-|.|-+.+|++|..||.|..||+++|..                
T Consensus       118 ~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~----------------  181 (327)
T KOG0643|consen  118 YTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKE----------------  181 (327)
T ss_pred             cceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCce----------------
Confidence                                        223444455555555555555555555555555432                


Q ss_pred             CCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE----------------------
Q psy11015        273 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL----------------------  330 (360)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l----------------------  330 (360)
                                 .+.....|+..|+.+.++|+..+++|||.|.+-++||+.+...++++                      
T Consensus       182 -----------~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgG  250 (327)
T KOG0643|consen  182 -----------LVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGG  250 (327)
T ss_pred             -----------eeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecC
Confidence                       24445678899999999999999999999999999998876554443                      


Q ss_pred             ---------------------------------ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        331 ---------------------------------TEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       331 ---------------------------------~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                                                       ++|=++|+++||||+|...+|+. |+.||
T Consensus       251 GqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR  312 (327)
T KOG0643|consen  251 GQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVR  312 (327)
T ss_pred             CceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEE
Confidence                                             25667888888888887666655 66555

>KOG0283|consensus

Probab=99.89  E-value=1e-22  Score=191.32  Aligned_cols=158  Identities=23%  Similarity=0.388  Sum_probs=136.9

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee-CCCEEEEEeCCCcEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHI  248 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~v  248 (360)
                      -.+++.|.||.+.|.+++|+.++ +|+|+|.|+|||+|++....|+++|. |...|+||+|+| |.++|++||-||.|+|
T Consensus       359 ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRi  436 (712)
T KOG0283|consen  359 EKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRL  436 (712)
T ss_pred             ccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEE
Confidence            36788999999999999999876 99999999999999999999999998 999999999999 6789999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  328 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~  328 (360)
                      |.+...                             .+.....-..-|++++|.|+|++.+.|+.+|.+++|++...+...
T Consensus       437 WsI~d~-----------------------------~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~  487 (712)
T KOG0283|consen  437 WSISDK-----------------------------KVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVS  487 (712)
T ss_pred             eecCcC-----------------------------eeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEE
Confidence            998654                             233333344789999999999999999999999999998777665


Q ss_pred             EEec--C------CCceEEEEEcCCCC--EEEcccccchh
Q psy11015        329 SLTE--P------GEAIRAAAGRTGGP--IRASPLLLAIR  358 (360)
Q Consensus       329 ~l~~--h------~~~v~~~~~~~~g~--~las~~~~~ir  358 (360)
                      .+..  |      ...|+++.|.|...  +|+|+.|..||
T Consensus       488 ~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIR  527 (712)
T KOG0283|consen  488 DFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIR  527 (712)
T ss_pred             eeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceE
Confidence            5431  1      23799999998765  99999999998

>KOG0282|consensus

Probab=99.89  E-value=8.9e-24  Score=186.88  Aligned_cols=156  Identities=21%  Similarity=0.280  Sum_probs=140.9

Q ss_pred             eeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      ..+.++.||+..|.++.|.| .+.+|++|+.|+.|+||++-. ++|+++|.||..+|.+++|+++|..|+++|.|+++++
T Consensus       205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl  284 (503)
T KOG0282|consen  205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL  284 (503)
T ss_pred             hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence            56788999999999999999 788999999999999999976 8999999999999999999999999999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeEE
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      ||+.+|..                            +..+. -...++++.|+|++ +.+++|+.|+.|+.||+++++.+
T Consensus       285 wDtETG~~----------------------------~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvv  335 (503)
T KOG0282|consen  285 WDTETGQV----------------------------LSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVV  335 (503)
T ss_pred             eccccceE----------------------------EEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHH
Confidence            99999833                            33332 23467899999998 78899999999999999999999


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      +++..|-++|..+.|-++|..++|++|.
T Consensus       336 qeYd~hLg~i~~i~F~~~g~rFissSDd  363 (503)
T KOG0282|consen  336 QEYDRHLGAILDITFVDEGRRFISSSDD  363 (503)
T ss_pred             HHHHhhhhheeeeEEccCCceEeeeccC
Confidence            9999999999999999999988887753

>PTZ00421 coronin; Provisional

Probab=99.89  E-value=3.6e-21  Score=181.74  Aligned_cols=178  Identities=21%  Similarity=0.215  Sum_probs=140.3

Q ss_pred             eecCCeEEEeeecCcc-----ceeeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeE
Q psy11015        153 KVQTSKIVSSFKTSLL-----SCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN  226 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~-----~~~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~  226 (360)
                      .+..+..+.+|.....     ....+..+.+|...|.+++|+|++ ++|++|+.|++|+|||+.++..+..+.+|...|.
T Consensus        93 SgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~  172 (493)
T PTZ00421         93 TASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQIT  172 (493)
T ss_pred             EEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceE
Confidence            3444555556665432     124677899999999999999985 6999999999999999999999999999999999


Q ss_pred             EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCc-EEEEEEcCCCC
Q psy11015        227 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV-VIAADWLSDGE  305 (360)
Q Consensus       227 ~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~i~~sp~g~  305 (360)
                      +++|+|+|.+|++|+.|++|++||++++                            ..+..+.+|.+. +..+.|.+++.
T Consensus       173 sla~spdG~lLatgs~Dg~IrIwD~rsg----------------------------~~v~tl~~H~~~~~~~~~w~~~~~  224 (493)
T PTZ00421        173 SLEWNLDGSLLCTTSKDKKLNIIDPRDG----------------------------TIVSSVEAHASAKSQRCLWAKRKD  224 (493)
T ss_pred             EEEEECCCCEEEEecCCCEEEEEECCCC----------------------------cEEEEEecCCCCcceEEEEcCCCC
Confidence            9999999999999999999999999876                            245567778754 45678999888


Q ss_pred             EEEEEE----CCCcEEEEECCCCe-EEEEEecC-CCceEEEEEcCCCCEEEccc--ccchh
Q psy11015        306 QVITAS----WDRVANLFDVETGT-ILQSLTEP-GEAIRAAAGRTGGPIRASPL--LLAIR  358 (360)
Q Consensus       306 ~l~tgs----~dg~i~iwd~~~~~-~~~~l~~h-~~~v~~~~~~~~g~~las~~--~~~ir  358 (360)
                      .+++++    .|+.|++||+++.. ++.....+ ...+....|++++.++++++  |+.||
T Consensus       225 ~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Ir  285 (493)
T PTZ00421        225 LIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIR  285 (493)
T ss_pred             eEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEE
Confidence            887765    47899999998754 44444333 34566678899998877654  66665

>KOG0277|consensus

Probab=99.89  E-value=2.8e-22  Score=164.28  Aligned_cols=177  Identities=21%  Similarity=0.359  Sum_probs=146.9

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~  231 (360)
                      .+...+.+..|. ......+++.++.|...|.++.|++. +..++++|-|++|++|+..-++.++++.||...|....|+
T Consensus        78 ~a~GDGSLrl~d-~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~s  156 (311)
T KOG0277|consen   78 AASGDGSLRLFD-LTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFS  156 (311)
T ss_pred             EEecCceEEEec-cCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecC
Confidence            444555555666 33445688999999999999999985 4478888999999999999999999999999999999999


Q ss_pred             e-CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEE
Q psy11015        232 P-NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVIT  309 (360)
Q Consensus       232 p-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~t  309 (360)
                      | .+++++++|.|+++++||++..                           + ....+..|...+.++.|+. +.+.++|
T Consensus       157 p~~~nlfas~Sgd~~l~lwdvr~~---------------------------g-k~~~i~ah~~Eil~cdw~ky~~~vl~T  208 (311)
T KOG0277|consen  157 PHIPNLFASASGDGTLRLWDVRSP---------------------------G-KFMSIEAHNSEILCCDWSKYNHNVLAT  208 (311)
T ss_pred             CCCCCeEEEccCCceEEEEEecCC---------------------------C-ceeEEEeccceeEeecccccCCcEEEe
Confidence            9 5689999999999999998754                           1 2333778999999999986 5567899


Q ss_pred             EECCCcEEEEECCCC-eEEEEEecCCCceEEEEEcCCC-CEEEccc-ccchh
Q psy11015        310 ASWDRVANLFDVETG-TILQSLTEPGEAIRAAAGRTGG-PIRASPL-LLAIR  358 (360)
Q Consensus       310 gs~dg~i~iwd~~~~-~~~~~l~~h~~~v~~~~~~~~g-~~las~~-~~~ir  358 (360)
                      |+.|+.|++||+++. .++.++.+|+-.|..+.|+|.- .++||++ |.++|
T Consensus       209 g~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~r  260 (311)
T KOG0277|consen  209 GGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVR  260 (311)
T ss_pred             cCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEE
Confidence            999999999999865 4678899999999999999964 5777665 55544

>KOG0292|consensus

Probab=99.89  E-value=7.1e-23  Score=192.66  Aligned_cols=156  Identities=19%  Similarity=0.328  Sum_probs=145.1

Q ss_pred             eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      .|...+..|-.++|+|..++++++--.|.|++||.+.+.++..|..|.|+|+.++|+|++.+|+||+.|.+|+||+..+.
T Consensus         4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r   83 (1202)
T KOG0292|consen    4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR   83 (1202)
T ss_pred             hhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc
Confidence            34556778999999999999999999999999999999999999999999999999999999999999999999998754


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCC
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~  334 (360)
                                                  +++.++.||-..|..+.|++.-.+|+++|.|.+|+||+..+++++..+.+|.
T Consensus        84 ----------------------------rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHn  135 (1202)
T KOG0292|consen   84 ----------------------------RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHN  135 (1202)
T ss_pred             ----------------------------eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCc
Confidence                                        5678899999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEcCCCCEEEccc-ccchh
Q psy11015        335 EAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       335 ~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .-|.|..|||...+++|++ |++||
T Consensus       136 HYVMcAqFhptEDlIVSaSLDQTVR  160 (1202)
T KOG0292|consen  136 HYVMCAQFHPTEDLIVSASLDQTVR  160 (1202)
T ss_pred             eEEEeeccCCccceEEEecccceEE
Confidence            9999999999887777776 77776

>KOG0265|consensus

Probab=99.89  E-value=5.5e-22  Score=166.10  Aligned_cols=187  Identities=19%  Similarity=0.301  Sum_probs=151.0

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      .++-.+.||++.|+.+.|+|+|..|+|||.|..|.+|++.. -+....+++|.+.|..+.|.++++.++++|.|++++.|
T Consensus        38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~w  117 (338)
T KOG0265|consen   38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGW  117 (338)
T ss_pred             chhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEE
Confidence            34556789999999999999999999999999999999653 35677888999999999999999999999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCC----------CCCCcccc-----ccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKE----------PDESSITL-----RTPVKELLGHSNVVIAADWLSDGEQVITASWDR  314 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~-----~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg  314 (360)
                      |+++|........+..........          ..+.....     ..+++++ .....++++.|...+..+.+|+-|+
T Consensus       118 D~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~-~~kyqltAv~f~d~s~qv~sggIdn  196 (338)
T KOG0265|consen  118 DAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF-ENKYQLTAVGFKDTSDQVISGGIDN  196 (338)
T ss_pred             ecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc-ccceeEEEEEecccccceeeccccC
Confidence            999998888777665544333211          11111111     1122222 2345799999999999999999999


Q ss_pred             cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        315 VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       315 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .|++||++.....+++.+|..+|+.+..+|+|.++.|-+ |..+|
T Consensus       197 ~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvr  241 (338)
T KOG0265|consen  197 DIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVR  241 (338)
T ss_pred             ceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEE
Confidence            999999999999999999999999999999998766544 55554

>KOG0274|consensus

Probab=99.89  E-value=2e-21  Score=183.99  Aligned_cols=163  Identities=27%  Similarity=0.428  Sum_probs=143.2

Q ss_pred             ecCccceeeeee-eecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC
Q psy11015        164 KTSLLSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG  242 (360)
Q Consensus       164 ~~~~~~~~~~~~-l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~  242 (360)
                      .++...+..+.. +.||.+.|+++++...++.+++|+.|.+++|||..+|.|..++.||.+.|.++...  +..+++||.
T Consensus       232 ~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~  309 (537)
T KOG0274|consen  232 LWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSR  309 (537)
T ss_pred             EeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccC
Confidence            344566677777 99999999999999878899999999999999999999999999999999999984  457888999


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      |.+|++|++.++                            ..+..+.+|.++|.++..+  +.++++|+.||+|++||+.
T Consensus       310 D~tVkVW~v~n~----------------------------~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~  359 (537)
T KOG0274|consen  310 DNTVKVWDVTNG----------------------------ACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR  359 (537)
T ss_pred             CceEEEEeccCc----------------------------ceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhh
Confidence            999999999866                            4567777899999999995  8899999999999999999


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      ++++++++.+|...|+++.+.+...++-++.|..||
T Consensus       360 ~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~Ik  395 (537)
T KOG0274|consen  360 TGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIK  395 (537)
T ss_pred             hceeeeeecCCcceEEEEEecCcceEEeeeeccceE
Confidence            999999999999999999888764455555576665

>KOG0281|consensus

Probab=99.88  E-value=2.7e-23  Score=177.10  Aligned_cols=158  Identities=22%  Similarity=0.372  Sum_probs=142.0

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEeCCCcCeEEEEEeeCCCEEEEEeC
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKDLVLSASG  242 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~~h~~~v~~i~~~p~~~~l~s~s~  242 (360)
                      +-.++.++.++-+|...|..+.|+  ..+++|+|.|.++.|||+....   +.+.+.||...|+.+.|  +.++++++|+
T Consensus       263 Dv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdf--d~kyIVsASg  338 (499)
T KOG0281|consen  263 DVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG  338 (499)
T ss_pred             eccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecc--ccceEEEecC
Confidence            337889999999999999999998  4499999999999999998653   55667899999999999  5669999999


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      |++|++|++.++                            ..+.++.||...|.|+.+  .|+++++||.|.+|++||+.
T Consensus       339 DRTikvW~~st~----------------------------efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~  388 (499)
T KOG0281|consen  339 DRTIKVWSTSTC----------------------------EFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIE  388 (499)
T ss_pred             CceEEEEeccce----------------------------eeehhhhcccccceehhc--cCeEEEecCCCceEEEEecc
Confidence            999999998776                            467889999999999888  78999999999999999999


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      .|.++..+.+|..-|.++.|. +.+++..|+|+.||
T Consensus       389 ~G~cLRvLeGHEeLvRciRFd-~krIVSGaYDGkik  423 (499)
T KOG0281|consen  389 CGACLRVLEGHEELVRCIRFD-NKRIVSGAYDGKIK  423 (499)
T ss_pred             ccHHHHHHhchHHhhhheeec-CceeeeccccceEE
Confidence            999999999999999999997 66788888888876

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.88  E-value=6.1e-21  Score=168.12  Aligned_cols=157  Identities=29%  Similarity=0.472  Sum_probs=142.6

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~  252 (360)
                      ++++.+|.++|.+++|+|++++|++|+.||.|++|++.++.....+.+|...+..+.|+|+++++++++.|+.+++||+.
T Consensus         2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~   81 (289)
T cd00200           2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE   81 (289)
T ss_pred             chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence            45678999999999999999999999999999999999998888899999999999999999999999999999999987


Q ss_pred             cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                      .+                            .....+..|...+.+++|+|++.++++++.||.+.+||+.+++....+..
T Consensus        82 ~~----------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  133 (289)
T cd00200          82 TG----------------------------ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRG  133 (289)
T ss_pred             cc----------------------------cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEecc
Confidence            64                            24556678888999999999988999998899999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        333 PGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      |...+++++|+|++.+++++. ++.|
T Consensus       134 ~~~~i~~~~~~~~~~~l~~~~~~~~i  159 (289)
T cd00200         134 HTDWVNSVAFSPDGTFVASSSQDGTI  159 (289)
T ss_pred             CCCcEEEEEEcCcCCEEEEEcCCCcE
Confidence            999999999999999999887 6554

>KOG0291|consensus

Probab=99.88  E-value=4.5e-21  Score=177.94  Aligned_cols=163  Identities=20%  Similarity=0.334  Sum_probs=134.9

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC-CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D-g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      ....+++.+.--...|..++|+..|.+|+.||.. |.+-||+..+..-+...+||...+.+++++|||+++++|+.||+|
T Consensus       295 P~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKV  374 (893)
T KOG0291|consen  295 PDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKV  374 (893)
T ss_pred             CCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcE
Confidence            4556777777777899999999999999998775 899999999999999999999999999999999999999999999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE------
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD------  320 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd------  320 (360)
                      +|||...+-                            +..++..|++.|++++|+..|+.++++|.||+|+.||      
T Consensus       375 KvWn~~Sgf----------------------------C~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrN  426 (893)
T KOG0291|consen  375 KVWNTQSGF----------------------------CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRN  426 (893)
T ss_pred             EEEeccCce----------------------------EEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccce
Confidence            999998874                            4555666666666666666666666666666666665      


Q ss_pred             --------------------------------------CCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        321 --------------------------------------VETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       321 --------------------------------------~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                                                            +.+|+.+..+.+|.++|.+++|+|.|..+||++ |.+||
T Consensus       427 fRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVR  503 (893)
T KOG0291|consen  427 FRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVR  503 (893)
T ss_pred             eeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEE
Confidence                                                  445666666779999999999999999998876 77776

>KOG0319|consensus

Probab=99.87  E-value=9.3e-22  Score=182.08  Aligned_cols=175  Identities=23%  Similarity=0.258  Sum_probs=145.2

Q ss_pred             ecCCeEEEeeec--CccceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCe-----EEE----EEeCC
Q psy11015        154 VQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGK-----CVL----QYSGH  221 (360)
Q Consensus       154 ~~~~~~~~~~~~--~~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~-----~~~----~~~~h  221 (360)
                      ++....+..|..  +.....++....||++.|.+++++..+. +|+++|.|+++++|++...+     .+.    .-..|
T Consensus       383 ~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aH  462 (775)
T KOG0319|consen  383 GSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAH  462 (775)
T ss_pred             ecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhh
Confidence            344444444543  3344456777889999999999977554 99999999999999997621     111    22469


Q ss_pred             CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      ...|++++++|+..+++|||.|++.++|++..+                            ....++.||...|+++.|+
T Consensus       463 dKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~----------------------------~l~~vLsGH~RGvw~V~Fs  514 (775)
T KOG0319|consen  463 DKDINCVAIAPNDKLIATGSQDKTAKIWDLEQL----------------------------RLLGVLSGHTRGVWCVSFS  514 (775)
T ss_pred             cccccceEecCCCceEEecccccceeeecccCc----------------------------eEEEEeeCCccceEEEEec
Confidence            999999999999999999999999999998744                            4578899999999999999


Q ss_pred             CCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccc
Q psy11015        302 SDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLA  356 (360)
Q Consensus       302 p~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~  356 (360)
                      |..+.++|+|.|++|+||.+.+..|+++|.+|...|..+.|-.+|..++|+. |+-
T Consensus       515 ~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGl  570 (775)
T KOG0319|consen  515 KNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGL  570 (775)
T ss_pred             cccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCc
Confidence            9999999999999999999999999999999999999999988887666554 543

>KOG0318|consensus

Probab=99.87  E-value=1.3e-20  Score=168.50  Aligned_cols=159  Identities=25%  Similarity=0.372  Sum_probs=140.4

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ++.-+-++.||...|++++|-|..+ .++|||.|++|-+|+-..-+.-.++..|...|+|+.|+|||.+|++++.||++.
T Consensus       136 SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~  215 (603)
T KOG0318|consen  136 SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIY  215 (603)
T ss_pred             CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEE
Confidence            5566788999999999999999888 799999999999999888888888999999999999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee---CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      +||=.++..                            +..+.   +|.+.|.+++|+||+.+++|+|.|.+++|||+.+.
T Consensus       216 iyDGktge~----------------------------vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~  267 (603)
T KOG0318|consen  216 IYDGKTGEK----------------------------VGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN  267 (603)
T ss_pred             EEcCCCccE----------------------------EEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeecc
Confidence            999887743                            44444   89999999999999999999999999999998876


Q ss_pred             eEEEE-------------------------------------------EecCCCceEEEEEcCCCCEEEccccc
Q psy11015        325 TILQS-------------------------------------------LTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       325 ~~~~~-------------------------------------------l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      +++.+                                           +.+|...|++++.+|++.++.|++..
T Consensus       268 slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyD  341 (603)
T KOG0318|consen  268 SLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYD  341 (603)
T ss_pred             ceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccC
Confidence            55443                                           33788899999999999988887743

>KOG0275|consensus

Probab=99.87  E-value=7.3e-23  Score=173.02  Aligned_cols=153  Identities=19%  Similarity=0.302  Sum_probs=135.6

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE--------eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY--------SGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~--------~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      |...-+-|..|+|||++|++||.||-|-|||.-+|+..+.+        .-+..+|.|++|+.|...+++|+.||.|++|
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW  290 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW  290 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence            45566888899999999999999999999999998755433        3477899999999999999999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  328 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~  328 (360)
                      .+.+|                            .++..+. .|+..|+++.|+.|+.++++++.|.++++..+.+|++++
T Consensus       291 ri~tG----------------------------~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LK  342 (508)
T KOG0275|consen  291 RIETG----------------------------QCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLK  342 (508)
T ss_pred             EEecc----------------------------hHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHH
Confidence            99988                            3455554 799999999999999999999999999999999999999


Q ss_pred             EEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        329 SLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .+++|..-|+.+.|.++|..+.+++ |++||
T Consensus       343 EfrGHsSyvn~a~ft~dG~~iisaSsDgtvk  373 (508)
T KOG0275|consen  343 EFRGHSSYVNEATFTDDGHHIISASSDGTVK  373 (508)
T ss_pred             HhcCccccccceEEcCCCCeEEEecCCccEE
Confidence            9999999999999999998766655 77665

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.87  E-value=3e-20  Score=187.90  Aligned_cols=162  Identities=19%  Similarity=0.282  Sum_probs=140.7

Q ss_pred             ccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe-eCCCEEEEEeCCC
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL-PNKDLVLSASGDK  244 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~-p~~~~l~s~s~d~  244 (360)
                      ..+++.+..+.+|.+.|++++|+| ++.+|+||+.||+|++||+.++.++..+..+ ..|.++.|+ ++|.++++|+.|+
T Consensus       562 ~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg  640 (793)
T PLN00181        562 VARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADH  640 (793)
T ss_pred             CCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCC
Confidence            355678889999999999999997 6789999999999999999999999988854 689999996 4689999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC-
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET-  323 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~-  323 (360)
                      +|++||++.+.                           .+...+.+|...|.+++|. ++.++++|+.|++|++||++. 
T Consensus       641 ~I~iwD~~~~~---------------------------~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~  692 (793)
T PLN00181        641 KVYYYDLRNPK---------------------------LPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMS  692 (793)
T ss_pred             eEEEEECCCCC---------------------------ccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCC
Confidence            99999987541                           2355677899999999997 788999999999999999974 


Q ss_pred             -----CeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        324 -----GTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       324 -----~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                           +.++.++.+|...+..++|+|++.++|+++ |+.|
T Consensus       693 ~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v  732 (793)
T PLN00181        693 ISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEV  732 (793)
T ss_pred             ccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEE
Confidence                 357888999999999999999999999887 4443

>KOG0293|consensus

Probab=99.87  E-value=9.6e-22  Score=170.97  Aligned_cols=191  Identities=18%  Similarity=0.243  Sum_probs=140.5

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      .+++..+.+..|++.||-+.|+++|.+||||+.|.++.+|++...   +..+++.||..+|.-|.|+||.+++++|+.|.
T Consensus       212 ip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e  291 (519)
T KOG0293|consen  212 IPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE  291 (519)
T ss_pred             CCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH
Confidence            445667788999999999999999999999999999999998654   45788899999999999999999999999999


Q ss_pred             cEEEEEcccCeeEeeeCCC-CCCCCCCC---C------CCCCCccc----------cc----------------------
Q psy11015        245 SVHIWQAVINWECLVSNND-NDSDLDES---K------EPDESSIT----------LR----------------------  282 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~-~~~~~~~~---~------~~~~~~~~----------~~----------------------  282 (360)
                      .+.+||+.+|.....+... ..+.....   .      +..+..+.          .|                      
T Consensus       292 ~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~  371 (519)
T KOG0293|consen  292 VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLL  371 (519)
T ss_pred             heeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEE
Confidence            9999999988655444333 00000000   0      00000000          00                      


Q ss_pred             --------------------------------------------------------cceeEeeCCCC--cEEEEEEcC-C
Q psy11015        283 --------------------------------------------------------TPVKELLGHSN--VVIAADWLS-D  303 (360)
Q Consensus       283 --------------------------------------------------------~~~~~~~~h~~--~v~~i~~sp-~  303 (360)
                                                                              ..+..+.||..  .+..-+|.- +
T Consensus       372 v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~  451 (519)
T KOG0293|consen  372 VTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGN  451 (519)
T ss_pred             EecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCC
Confidence                                                                    01222334432  233334533 3


Q ss_pred             CCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCC-CEEEccc-ccchh
Q psy11015        304 GEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG-PIRASPL-LLAIR  358 (360)
Q Consensus       304 g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g-~~las~~-~~~ir  358 (360)
                      ..++++||.|+.|+||+..+|+++.++.+|...|++++|+|.. ..+|||+ |++||
T Consensus       452 ~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIR  508 (519)
T KOG0293|consen  452 DKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIR  508 (519)
T ss_pred             cceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEE
Confidence            3688999999999999999999999999999999999999966 4777777 45565

>KOG1407|consensus

Probab=99.87  E-value=3.4e-21  Score=158.47  Aligned_cols=171  Identities=22%  Similarity=0.301  Sum_probs=142.1

Q ss_pred             cCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEE-----------------
Q psy11015        155 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVL-----------------  216 (360)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~-----------------  216 (360)
                      +.++.+.+|.........--.+.||.+.|-.++|+|.. +.+++++.|++|++||++.++|+.                 
T Consensus        39 s~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g  118 (313)
T KOG1407|consen   39 SFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDG  118 (313)
T ss_pred             ccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCC
Confidence            33444444554444444445668999999999998864 499999999999999998876642                 


Q ss_pred             -----------------------------------------------------------------EEeCCCcCeEEEEEe
Q psy11015        217 -----------------------------------------------------------------QYSGHSGSVNSVRFL  231 (360)
Q Consensus       217 -----------------------------------------------------------------~~~~h~~~v~~i~~~  231 (360)
                                                                                       .+++|.....||.|+
T Consensus       119 ~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~  198 (313)
T KOG1407|consen  119 EYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFD  198 (313)
T ss_pred             CEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEEC
Confidence                                                                             234688888899999


Q ss_pred             eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                      |+|++|++|+.|..+-+||+..-                            -+...+..+.-+|..++|+-+|++||+||
T Consensus       199 p~GryfA~GsADAlvSLWD~~EL----------------------------iC~R~isRldwpVRTlSFS~dg~~lASaS  250 (313)
T KOG1407|consen  199 PDGRYFATGSADALVSLWDVDEL----------------------------ICERCISRLDWPVRTLSFSHDGRMLASAS  250 (313)
T ss_pred             CCCceEeeccccceeeccChhHh----------------------------hhheeeccccCceEEEEeccCcceeeccC
Confidence            99999999999999999998644                            24667778899999999999999999999


Q ss_pred             CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      .|..|-|=++.+|..+..+. +.++...+||||...+||-+.+
T Consensus       251 EDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~d  292 (313)
T KOG1407|consen  251 EDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACD  292 (313)
T ss_pred             ccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEec
Confidence            99999999999999999986 7889999999999999997765

>KOG0289|consensus

Probab=99.86  E-value=1.9e-20  Score=163.86  Aligned_cols=165  Identities=19%  Similarity=0.165  Sum_probs=147.2

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      +....+.+.+|.||+..|+.+.++|+...+++++.|..|+||......+......|.++|+.+..+|.|.||++++.|++
T Consensus       247 d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~  326 (506)
T KOG0289|consen  247 DKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGT  326 (506)
T ss_pred             ecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCce
Confidence            34567889999999999999999999999999999999999999888888888899999999999999999999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      ..+.|++++.....                          ..-....-.+++++|+|||..|++|..||.++|||+.++.
T Consensus       327 w~Fsd~~~g~~lt~--------------------------vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~  380 (506)
T KOG0289|consen  327 WAFSDISSGSQLTV--------------------------VSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQT  380 (506)
T ss_pred             EEEEEccCCcEEEE--------------------------EeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcc
Confidence            99999998844321                          1111122358999999999999999999999999999999


Q ss_pred             EEEEEecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        326 ILQSLTEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      .+..|.+|.++|.+++|+.+|-|+|++.+.+
T Consensus       381 ~~a~Fpght~~vk~i~FsENGY~Lat~add~  411 (506)
T KOG0289|consen  381 NVAKFPGHTGPVKAISFSENGYWLATAADDG  411 (506)
T ss_pred             ccccCCCCCCceeEEEeccCceEEEEEecCC
Confidence            9999999999999999999999999999876

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.86  E-value=7e-20  Score=161.31  Aligned_cols=172  Identities=31%  Similarity=0.496  Sum_probs=149.4

Q ss_pred             CeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCE
Q psy11015        157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL  236 (360)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~  236 (360)
                      +..+..|...  ....+..+.+|...|.++.|++++.++++++.||.|++||+.+++....+..|...|.+++|+|++.+
T Consensus        72 ~~~i~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  149 (289)
T cd00200          72 DKTIRLWDLE--TGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTF  149 (289)
T ss_pred             CCeEEEEEcC--cccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCE
Confidence            4444444443  34677788899999999999999889999998999999999999999999999999999999999999


Q ss_pred             EEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcE
Q psy11015        237 VLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA  316 (360)
Q Consensus       237 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i  316 (360)
                      +++++.|+.+++||++.+                            .+...+..|...+.+++|+|+++.+++++.||.+
T Consensus       150 l~~~~~~~~i~i~d~~~~----------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i  201 (289)
T cd00200         150 VASSSQDGTIKLWDLRTG----------------------------KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTI  201 (289)
T ss_pred             EEEEcCCCcEEEEEcccc----------------------------ccceeEecCccccceEEECCCcCEEEEecCCCcE
Confidence            888888999999998754                            3455666888899999999999999999999999


Q ss_pred             EEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        317 NLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       317 ~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ++||+.+++.+..+..|...+.+++|+|++.+++++. ++.|+
T Consensus       202 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~  244 (289)
T cd00200         202 KLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIR  244 (289)
T ss_pred             EEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEE
Confidence            9999999999999988999999999999999999887 65543

>KOG0296|consensus

Probab=99.86  E-value=1.9e-20  Score=160.66  Aligned_cols=157  Identities=15%  Similarity=0.243  Sum_probs=142.1

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      -+.+|..|++.|.+++.+|+.++++|||.|....+|++.+|.....+.+|...|.++.|+-+|.+|+||+.+|.|+||+.
T Consensus        56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~  135 (399)
T KOG0296|consen   56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKV  135 (399)
T ss_pred             ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEc
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      .++...                            ..+..-...+.=+.|+|.+..|+.|+.||.+.+|.+.++...+.+.
T Consensus       136 stg~~~----------------------------~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~  187 (399)
T KOG0296|consen  136 STGGEQ----------------------------WKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMS  187 (399)
T ss_pred             ccCceE----------------------------EEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEec
Confidence            887433                            3333344567789999999999999999999999999988889999


Q ss_pred             cCCCceEEEEEcCCCCEEEcccccc
Q psy11015        332 EPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       332 ~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      +|+.++++=.|.|+|..++++++.+
T Consensus       188 Gh~~~ct~G~f~pdGKr~~tgy~dg  212 (399)
T KOG0296|consen  188 GHNSPCTCGEFIPDGKRILTGYDDG  212 (399)
T ss_pred             CCCCCcccccccCCCceEEEEecCc
Confidence            9999999999999999999888543

>KOG0288|consensus

Probab=99.86  E-value=1.5e-21  Score=169.84  Aligned_cols=201  Identities=16%  Similarity=0.189  Sum_probs=151.6

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      +....++..|+........+.++.|-.+.|+++.|.+++..+++++.|+.+++|++...+...++.||+..|+++.|...
T Consensus       193 gg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~  272 (459)
T KOG0288|consen  193 GGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLS  272 (459)
T ss_pred             cchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhcc
Confidence            44455666777777778899999999999999999999999999999999999999999999999999999999999877


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCC------CCCCCCCCccccc-------------------------
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLD------ESKEPDESSITLR-------------------------  282 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-------------------------  282 (360)
                      ...+++|+.|.+|++||+...++...+.........      ......+....+|                         
T Consensus       273 ~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~  352 (459)
T KOG0288|consen  273 HSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMD  352 (459)
T ss_pred             ccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccC
Confidence            666999999999999999886544332222111000      0000000000000                         


Q ss_pred             ---------------------cceeEeeC----CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCC--
Q psy11015        283 ---------------------TPVKELLG----HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE--  335 (360)
Q Consensus       283 ---------------------~~~~~~~~----h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~--  335 (360)
                                           ...+.+..    .....+.+.|||++.|+++||.||.|+||++.++++...+.....  
T Consensus       353 g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~  432 (459)
T KOG0288|consen  353 GLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNA  432 (459)
T ss_pred             CeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCc
Confidence                                 01111111    112367888999999999999999999999999999988876544  


Q ss_pred             ceEEEEEcCCCCEEEcccc
Q psy11015        336 AIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~~~  354 (360)
                      .|++++|+|.|..++++..
T Consensus       433 aI~s~~W~~sG~~Llsadk  451 (459)
T KOG0288|consen  433 AITSLSWNPSGSGLLSADK  451 (459)
T ss_pred             ceEEEEEcCCCchhhcccC
Confidence            5999999999998887764

>KOG0315|consensus

Probab=99.86  E-value=3.2e-20  Score=151.81  Aligned_cols=163  Identities=17%  Similarity=0.221  Sum_probs=142.7

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--eEEEEEeCCCcCeEEEEEeeCCCEEEE
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKDLVLS  239 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~~~h~~~v~~i~~~p~~~~l~s  239 (360)
                      +.-|...+|.+.++++-..+-|+.+...|++..|+.|+.- .||+||++++  .++.+|.+|...|.++.|..+|+.+++
T Consensus        22 IRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyT  100 (311)
T KOG0315|consen   22 IRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYT  100 (311)
T ss_pred             eeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEe
Confidence            3455667889999999889999999999999999888764 8999999987  479999999999999999999999999


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEE
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF  319 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iw  319 (360)
                      ||.||+++|||++..                             ..+....|.++|+++..+|+...|++|..+|.|++|
T Consensus       101 gseDgt~kIWdlR~~-----------------------------~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvW  151 (311)
T KOG0315|consen  101 GSEDGTVKIWDLRSL-----------------------------SCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVW  151 (311)
T ss_pred             cCCCceEEEEeccCc-----------------------------ccchhccCCCCcceEEecCCcceEEeecCCCcEEEE
Confidence            999999999999863                             234455688999999999999999999999999999


Q ss_pred             ECCCCeEEEEEec-CCCceEEEEEcCCCCEEEcccc
Q psy11015        320 DVETGTILQSLTE-PGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       320 d~~~~~~~~~l~~-h~~~v~~~~~~~~g~~las~~~  354 (360)
                      |+....+...+.. ...+|.+++..|+|..++.+..
T Consensus       152 Dl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nn  187 (311)
T KOG0315|consen  152 DLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANN  187 (311)
T ss_pred             EccCCccccccCCCCCcceeeEEEcCCCcEEEEecC
Confidence            9998877766643 4578999999999999988765

>KOG0267|consensus

Probab=99.86  E-value=5e-22  Score=183.45  Aligned_cols=155  Identities=21%  Similarity=0.326  Sum_probs=145.5

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      .+..|.+|..+|-++.|++...+|+.|+.||+|++||++.++.++++.||...+.++.|+|-+.++++|+.|+.+++||.
T Consensus        62 ~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~  141 (825)
T KOG0267|consen   62 AITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDI  141 (825)
T ss_pred             hhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhh
Confidence            34458999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      +..                            .+.+.+.+|...|..+.|+|+|++++.|+.|.+++|||...|+....|.
T Consensus       142 Rk~----------------------------Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~  193 (825)
T KOG0267|consen  142 RKK----------------------------GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFK  193 (825)
T ss_pred             hcc----------------------------CceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccc
Confidence            843                            3678888999999999999999999999999999999999999999999


Q ss_pred             cCCCceEEEEEcCCCCEEEcccc
Q psy11015        332 EPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       332 ~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      .|.+.+.++.|+|..-++++++.
T Consensus       194 ~~e~~v~sle~hp~e~Lla~Gs~  216 (825)
T KOG0267|consen  194 SHEGKVQSLEFHPLEVLLAPGSS  216 (825)
T ss_pred             cccccccccccCchhhhhccCCC
Confidence            99999999999999999988774

>KOG0302|consensus

Probab=99.85  E-value=6.3e-21  Score=164.23  Aligned_cols=164  Identities=20%  Similarity=0.289  Sum_probs=137.8

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeE---EEEEeCCCcCeEEEEEeeCC-CEEEEEeC
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKC---VLQYSGHSGSVNSVRFLPNK-DLVLSASG  242 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~---~~~~~~h~~~v~~i~~~p~~-~~l~s~s~  242 (360)
                      ....++.++.+|.+.=++++|+|-.. .|+||..-+.|++|...+|.-   ...|.+|..+|..++|+|.. ..|++||.
T Consensus       199 s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~  278 (440)
T KOG0302|consen  199 SEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSC  278 (440)
T ss_pred             cccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeec
Confidence            44578899999999999999999432 689999999999999988742   23466799999999999964 58899999


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      ||+|+|||++.+..                          ++......|.+.|+.|+|+..-.+||+|+.||+++|||++
T Consensus       279 DgsIrIWDiRs~~~--------------------------~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR  332 (440)
T KOG0302|consen  279 DGSIRIWDIRSGPK--------------------------KAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLR  332 (440)
T ss_pred             CceEEEEEecCCCc--------------------------cceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhh
Confidence            99999999997621                          1223337899999999999888899999999999999998


Q ss_pred             C---CeEEEEEecCCCceEEEEEcCC--CCEEEcccccch
Q psy11015        323 T---GTILQSLTEPGEAIRAAAGRTG--GPIRASPLLLAI  357 (360)
Q Consensus       323 ~---~~~~~~l~~h~~~v~~~~~~~~--g~~las~~~~~i  357 (360)
                      +   ++++.+++.|..+|+++.|+|.  ..+.|++.|..|
T Consensus       333 ~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Qi  372 (440)
T KOG0302|consen  333 QFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQI  372 (440)
T ss_pred             hccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcE
Confidence            4   6788999999999999999984  567788888765

>KOG0289|consensus

Probab=99.85  E-value=4.6e-20  Score=161.51  Aligned_cols=154  Identities=21%  Similarity=0.216  Sum_probs=136.2

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC--CcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH--SGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h--~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      .......|.++|+.+..+|.|.+|++++.||+..+.|+++|.++......  .-.+++.+|||||-+|.+|..|+.+++|
T Consensus       295 ~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiw  374 (506)
T KOG0289|consen  295 EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIW  374 (506)
T ss_pred             CccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEE
Confidence            44566789999999999999999999999999999999999988877632  2348999999999999999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  329 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~  329 (360)
                      |+..+                            ..+..|.+|+++|.+++|+.+|-++++++.|+.|++||++..+.+++
T Consensus       375 dlks~----------------------------~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt  426 (506)
T KOG0289|consen  375 DLKSQ----------------------------TNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKT  426 (506)
T ss_pred             EcCCc----------------------------cccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccce
Confidence            99876                            34677889999999999999999999999999999999998888888


Q ss_pred             EecC-CCceEEEEEcCCCCEEEccc
Q psy11015        330 LTEP-GEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       330 l~~h-~~~v~~~~~~~~g~~las~~  353 (360)
                      +... ..+|.++.|.+.|.+++.++
T Consensus       427 ~~l~~~~~v~s~~fD~SGt~L~~~g  451 (506)
T KOG0289|consen  427 IQLDEKKEVNSLSFDQSGTYLGIAG  451 (506)
T ss_pred             eeccccccceeEEEcCCCCeEEeec
Confidence            7643 34799999999999888763

>KOG0647|consensus

Probab=99.85  E-value=2.3e-20  Score=156.56  Aligned_cols=181  Identities=19%  Similarity=0.241  Sum_probs=138.2

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC--EEEEEeCCCcEEEEEc
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD--LVLSASGDKSVHIWQA  251 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~--~l~s~s~d~~i~vwd~  251 (360)
                      +....|.++|.+++|+.+|..+++|+.|+.+++||+.+++ +..+..|.++|.++.|-+...  .|+|||.|++++.||.
T Consensus        66 ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~  144 (347)
T KOG0647|consen   66 KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDT  144 (347)
T ss_pred             hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeeccc
Confidence            4456799999999999999999999999999999999995 555667999999999987655  8999999999999999


Q ss_pred             ccCeeEeeeCCCCC---------------CCCCC-----CC---------CCC-----------------CCc-------
Q psy11015        252 VINWECLVSNNDND---------------SDLDE-----SK---------EPD-----------------ESS-------  278 (360)
Q Consensus       252 ~~~~~~~~~~~~~~---------------~~~~~-----~~---------~~~-----------------~~~-------  278 (360)
                      +..........+.-               .....     ..         ++.                 .+.       
T Consensus       145 R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~i  224 (347)
T KOG0647|consen  145 RSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAI  224 (347)
T ss_pred             CCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEE
Confidence            97765554433300               00000     00         000                 000       


Q ss_pred             --cccc--cceeEeeCCC---------CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCC
Q psy11015        279 --ITLR--TPVKELLGHS---------NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       279 --~~~~--~~~~~~~~h~---------~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~  345 (360)
                        +...  ..-.++..|.         ..|++++|+|.-..|+|++.||+..+||-.....+.+...|..+|++++|+.+
T Consensus       225 q~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~  304 (347)
T KOG0647|consen  225 QYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRN  304 (347)
T ss_pred             EecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCC
Confidence              0000  1223445554         25889999999999999999999999999888888888899999999999999


Q ss_pred             CCEEEccccc
Q psy11015        346 GPIRASPLLL  355 (360)
Q Consensus       346 g~~las~~~~  355 (360)
                      |.++|.+.-+
T Consensus       305 G~ifaYA~gY  314 (347)
T KOG0647|consen  305 GSIFAYALGY  314 (347)
T ss_pred             CCEEEEEeec
Confidence            9999976643

>KOG0264|consensus

Probab=99.85  E-value=2.2e-20  Score=164.47  Aligned_cols=176  Identities=24%  Similarity=0.348  Sum_probs=144.2

Q ss_pred             eeeecCCeEEEeeecCcc-----ceeeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECC--CCeEEEEEeCCC
Q psy11015        151 KLKVQTSKIVSSFKTSLL-----SCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQ--TGKCVLQYSGHS  222 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~--~~~~~~~~~~h~  222 (360)
                      .+.++....+|.|.....     .......|.+|.+.|..++|++.. .+|++++.|+.+.|||++  +.++.....+|.
T Consensus       193 Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~  272 (422)
T KOG0264|consen  193 LLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHS  272 (422)
T ss_pred             EeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccC
Confidence            445556666777766542     245677889999999999999954 489999999999999999  567778889999


Q ss_pred             cCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        223 GSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       223 ~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      +.|+|++|+|- +..||+||.|++|++||++..                           ..++.++.+|...|..+.|+
T Consensus       273 ~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL---------------------------~~~lh~~e~H~dev~~V~WS  325 (422)
T KOG0264|consen  273 AEVNCVAFNPFNEFILATGSADKTVALWDLRNL---------------------------NKPLHTFEGHEDEVFQVEWS  325 (422)
T ss_pred             CceeEEEeCCCCCceEEeccCCCcEEEeechhc---------------------------ccCceeccCCCcceEEEEeC
Confidence            99999999995 567899999999999999865                           34788999999999999999


Q ss_pred             CCCC-EEEEEECCCcEEEEECCCC--------------eEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        302 SDGE-QVITASWDRVANLFDVETG--------------TILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       302 p~g~-~l~tgs~dg~i~iwd~~~~--------------~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      |... .|++++.||.+.|||+..-              +.+..-.||...|..+.|+|+.+++..+.
T Consensus       326 Ph~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~Sv  392 (422)
T KOG0264|consen  326 PHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASV  392 (422)
T ss_pred             CCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEe
Confidence            9765 5788999999999998632              12345568999999999999998766544

>KOG0277|consensus

Probab=99.85  E-value=5.5e-20  Score=150.86  Aligned_cols=152  Identities=22%  Similarity=0.290  Sum_probs=128.0

Q ss_pred             CCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccCe
Q psy11015        179 HRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       179 h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      -.+.+..++|++.. +.+++++.||++++||... ..++..++.|...|.++.|++. ++.++++|.|++|++|+...+ 
T Consensus        59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~-  137 (311)
T KOG0277|consen   59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP-  137 (311)
T ss_pred             cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCC-
Confidence            35789999999964 4899999999999999753 3689999999999999999984 567888899999999997654 


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEEecCC
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~  334 (360)
                                                 ..+.++.||...|..++|+| .++.++++|.||++++||++.......+..|.
T Consensus       138 ---------------------------~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~  190 (311)
T KOG0277|consen  138 ---------------------------NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHN  190 (311)
T ss_pred             ---------------------------cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecc
Confidence                                       45788999999999999999 56789999999999999998644444588999


Q ss_pred             CceEEEEEcC-CCCEEEccc-ccchh
Q psy11015        335 EAIRAAAGRT-GGPIRASPL-LLAIR  358 (360)
Q Consensus       335 ~~v~~~~~~~-~g~~las~~-~~~ir  358 (360)
                      ..+.++.|+. +.++++|+. |..||
T Consensus       191 ~Eil~cdw~ky~~~vl~Tg~vd~~vr  216 (311)
T KOG0277|consen  191 SEILCCDWSKYNHNVLATGGVDNLVR  216 (311)
T ss_pred             ceeEeecccccCCcEEEecCCCceEE
Confidence            9999999986 566777766 55554

>KOG0306|consensus

Probab=99.85  E-value=1.5e-20  Score=174.49  Aligned_cols=163  Identities=24%  Similarity=0.390  Sum_probs=142.4

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC-----CeE---E------------------------
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----GKC---V------------------------  215 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-----~~~---~------------------------  215 (360)
                      .+..++.++++|.+.||+++.+||+..++|||+|.+|++||...     |..   +                        
T Consensus       442 aS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk  521 (888)
T KOG0306|consen  442 ASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGK  521 (888)
T ss_pred             ehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCc
Confidence            45566777889999999999999999999999999999999741     100   0                        


Q ss_pred             ----------------------EEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCC
Q psy11015        216 ----------------------LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKE  273 (360)
Q Consensus       216 ----------------------~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  273 (360)
                                            ..+-||.=+|.|+..+||+.+++|||.|++|++|-+.-|                   
T Consensus       522 ~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFG-------------------  582 (888)
T KOG0306|consen  522 LLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFG-------------------  582 (888)
T ss_pred             EEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccc-------------------
Confidence                                  113479899999999999999999999999999977644                   


Q ss_pred             CCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       274 ~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                               .+...+.+|...|.++.|.|....+.|+|.||.++-||-.....++.+.+|...|+|++..|+|.+++|++
T Consensus       583 ---------DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~s  653 (888)
T KOG0306|consen  583 ---------DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSS  653 (888)
T ss_pred             ---------hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEecc
Confidence                     57788999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             -ccchh
Q psy11015        354 -LLAIR  358 (360)
Q Consensus       354 -~~~ir  358 (360)
                       |-.||
T Consensus       654 hD~sIR  659 (888)
T KOG0306|consen  654 HDKSIR  659 (888)
T ss_pred             CCceeE
Confidence             56665

>PTZ00420 coronin; Provisional

Probab=99.85  E-value=2.8e-19  Score=170.05  Aligned_cols=177  Identities=12%  Similarity=0.132  Sum_probs=133.1

Q ss_pred             eecCCeEEEeeecCccc------eeeeeeeecCCCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEEEeCCCcCe
Q psy11015        153 KVQTSKIVSSFKTSLLS------CYKIRSFSGHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGHSGSV  225 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~------~~~~~~l~~h~~~V~~l~~~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v  225 (360)
                      .+.....+.+|......      ...+..+.+|.+.|.+++|+|++.. |+||+.|++|+|||+.+++.+..+. |...|
T Consensus        92 SgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V  170 (568)
T PTZ00420         92 SGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKL  170 (568)
T ss_pred             EEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcE
Confidence            34445555566654321      1245578999999999999998874 6799999999999999998887776 66789


Q ss_pred             EEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEE-----EEE
Q psy11015        226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA-----ADW  300 (360)
Q Consensus       226 ~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-----i~~  300 (360)
                      .+++|+|+|.+|++++.|++|+|||++++                            ..+..+.+|.+.+.+     ..|
T Consensus       171 ~SlswspdG~lLat~s~D~~IrIwD~Rsg----------------------------~~i~tl~gH~g~~~s~~v~~~~f  222 (568)
T PTZ00420        171 SSLKWNIKGNLLSGTCVGKHMHIIDPRKQ----------------------------EIASSFHIHDGGKNTKNIWIDGL  222 (568)
T ss_pred             EEEEECCCCCEEEEEecCCEEEEEECCCC----------------------------cEEEEEecccCCceeEEEEeeeE
Confidence            99999999999999999999999999876                            345567788775433     345


Q ss_pred             cCCCCEEEEEECCC----cEEEEECCC-CeEEEEEec--CCCceEEEEEcCCCCEEEcc-cccchh
Q psy11015        301 LSDGEQVITASWDR----VANLFDVET-GTILQSLTE--PGEAIRAAAGRTGGPIRASP-LLLAIR  358 (360)
Q Consensus       301 sp~g~~l~tgs~dg----~i~iwd~~~-~~~~~~l~~--h~~~v~~~~~~~~g~~las~-~~~~ir  358 (360)
                      ++++.+|+|++.|+    .|+|||+++ +.++..+..  +.+.+......++|.++++| .|+.||
T Consensus       223 s~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr  288 (568)
T PTZ00420        223 GGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCR  288 (568)
T ss_pred             cCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEE
Confidence            68999999988774    799999995 566665543  33444444446668877666 677776

>KOG0275|consensus

Probab=99.85  E-value=9.1e-22  Score=166.43  Aligned_cols=140  Identities=25%  Similarity=0.386  Sum_probs=127.8

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      -|.++|.|++|+.|...+++|+.||.|+||.+.+|.|++.|. +|+..|+|+.|+.|+..+++++.|.++++--+.+|  
T Consensus       261 Mmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSG--  338 (508)
T KOG0275|consen  261 MMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSG--  338 (508)
T ss_pred             ecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccc--
Confidence            478899999999999999999999999999999999999997 89999999999999999999999999999988776  


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC--C
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP--G  334 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h--~  334 (360)
                                                +.+..+.||++.|+.+.|.++|.+++++|.||+|++|+..+++|+.+++..  .
T Consensus       339 --------------------------K~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d  392 (508)
T KOG0275|consen  339 --------------------------KCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTD  392 (508)
T ss_pred             --------------------------hhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCc
Confidence                                      568889999999999999999999999999999999999999999998754  3


Q ss_pred             CceEEEEEcCC
Q psy11015        335 EAIRAAAGRTG  345 (360)
Q Consensus       335 ~~v~~~~~~~~  345 (360)
                      -+|.++..-|.
T Consensus       393 ~~vnsv~~~PK  403 (508)
T KOG0275|consen  393 YPVNSVILLPK  403 (508)
T ss_pred             ccceeEEEcCC
Confidence            46666665553

>KOG0310|consensus

Probab=99.85  E-value=6.4e-21  Score=169.13  Aligned_cols=162  Identities=22%  Similarity=0.367  Sum_probs=140.5

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSV  246 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i  246 (360)
                      .++...+++.--.+.|++++|..||.+++.|...|.|+|||..+...+..+.+|+.+|..+.|+|+++ .+++|+.|+.+
T Consensus        56 ~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~  135 (487)
T KOG0310|consen   56 VTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVV  135 (487)
T ss_pred             chhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceE
Confidence            34455566666788999999999999999999999999999877677888999999999999999664 67778888999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEECCCcEEEEECCCC-
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETG-  324 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~dg~i~iwd~~~~-  324 (360)
                      ++||+.+..                            ....+.+|+..|.+.+|+|-.. .++|||.||+|++||+++. 
T Consensus       136 k~~d~s~a~----------------------------v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~  187 (487)
T KOG0310|consen  136 KYWDLSTAY----------------------------VQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT  187 (487)
T ss_pred             EEEEcCCcE----------------------------EEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC
Confidence            999998762                            2457889999999999999655 6899999999999999977 


Q ss_pred             eEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      ..+.++. |+.+|-.+.+-|.|.++||++.+.+|
T Consensus       188 ~~v~eln-hg~pVe~vl~lpsgs~iasAgGn~vk  220 (487)
T KOG0310|consen  188 SRVVELN-HGCPVESVLALPSGSLIASAGGNSVK  220 (487)
T ss_pred             ceeEEec-CCCceeeEEEcCCCCEEEEcCCCeEE
Confidence            6677775 89999999999999999999987765

>KOG0973|consensus

Probab=99.85  E-value=2.2e-20  Score=180.05  Aligned_cols=157  Identities=29%  Similarity=0.348  Sum_probs=139.5

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC------------------CeEEEEEeCCCcCeEEEEEe
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT------------------GKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~------------------~~~~~~~~~h~~~v~~i~~~  231 (360)
                      ...+.+...|.+.|.|+.|+|||.+||+||.|+.|.||....                  .+++..+.+|.+.|.+++|+
T Consensus        59 ~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Ws  138 (942)
T KOG0973|consen   59 PKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWS  138 (942)
T ss_pred             chhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccC
Confidence            456677788999999999999999999999999999999772                  14678899999999999999


Q ss_pred             eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                      |++.+++++|.|++|.+|+..+.                            ..+..+.+|.+.|-.+.|.|-|+||++-+
T Consensus       139 p~~~~lvS~s~DnsViiwn~~tF----------------------------~~~~vl~~H~s~VKGvs~DP~Gky~ASqs  190 (942)
T KOG0973|consen  139 PDDSLLVSVSLDNSVIIWNAKTF----------------------------ELLKVLRGHQSLVKGVSWDPIGKYFASQS  190 (942)
T ss_pred             CCccEEEEecccceEEEEccccc----------------------------eeeeeeecccccccceEECCccCeeeeec
Confidence            99999999999999999998765                            45788999999999999999999999999


Q ss_pred             CCCcEEEEECCCCeEEEEEecCC------CceEEEEEcCCCCEEEcccc
Q psy11015        312 WDRVANLFDVETGTILQSLTEPG------EAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~------~~v~~~~~~~~g~~las~~~  354 (360)
                      .|++|+||++.+....+.+.++-      ....-+.|+|||.+++++..
T Consensus       191 dDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA  239 (942)
T KOG0973|consen  191 DDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNA  239 (942)
T ss_pred             CCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhh
Confidence            99999999988877888877653      35678899999999998753

>KOG0310|consensus

Probab=99.85  E-value=6e-20  Score=162.99  Aligned_cols=201  Identities=19%  Similarity=0.231  Sum_probs=153.7

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~  231 (360)
                      .|..++.+.+|.  ..+...++.+.+|+.+|..+.|+|.++ .+++|+.|+.+++||+.+......+.+|+..|+|.+|+
T Consensus        85 aGD~sG~V~vfD--~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~  162 (487)
T KOG0310|consen   85 AGDESGHVKVFD--MKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDIS  162 (487)
T ss_pred             ccCCcCcEEEec--cccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccc
Confidence            455666777777  344567888999999999999999765 78889999999999999998767899999999999999


Q ss_pred             eCC-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC-CCCC-------C-----CCcccc-ccceeEeeCCCCcEE
Q psy11015        232 PNK-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE-SKEP-------D-----ESSITL-RTPVKELLGHSNVVI  296 (360)
Q Consensus       232 p~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~-~~~~-------~-----~~~~~~-~~~~~~~~~h~~~v~  296 (360)
                      |-. ..++|||.||+|++||.+.......-..+..+.... +.++       .     .|.... +..+..+..|...|+
T Consensus       163 ~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVT  242 (487)
T KOG0310|consen  163 PANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVT  242 (487)
T ss_pred             cCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEE
Confidence            964 489999999999999999874222222222221111 1111       1     112221 222333445999999


Q ss_pred             EEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        297 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      |+.+..++..|++||-||.+++||+.+.+.++.+. -.++|.+++.+|++..++.|.-++
T Consensus       243 cL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnG  301 (487)
T KOG0310|consen  243 CLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNG  301 (487)
T ss_pred             EEEeecCCceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccc
Confidence            99999999999999999999999999899999997 467999999999988877766544

>KOG0274|consensus

Probab=99.85  E-value=3.4e-20  Score=175.62  Aligned_cols=159  Identities=25%  Similarity=0.371  Sum_probs=139.4

Q ss_pred             cCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        165 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       165 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      |+..++.+.+.+.||.+.|.++...+.  .+++||.|.+|++|++.++.++..+.+|.++|+++..+  +.++++|+.|+
T Consensus       276 Wd~~sg~C~~~l~gh~stv~~~~~~~~--~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~  351 (537)
T KOG0274|consen  276 WDCSTGECTHSLQGHTSSVRCLTIDPF--LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDG  351 (537)
T ss_pred             EecCCCcEEEEecCCCceEEEEEccCc--eEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCc
Confidence            346889999999999999999998854  78999999999999999999999999999999999996  88999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      +|++||+.++                            +++.++.+|...|.++.+.+. .++++|+.|++|++||+++.
T Consensus       352 ~v~VW~~~~~----------------------------~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~  402 (537)
T KOG0274|consen  352 TVKVWDPRTG----------------------------KCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTK  402 (537)
T ss_pred             eEEEEEhhhc----------------------------eeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCch
Confidence            9999999866                            578899999999999988544 89999999999999999999


Q ss_pred             -eEEEEEecCCCceEEEEEcCCCCEEE-cccccchh
Q psy11015        325 -TILQSLTEPGEAIRAAAGRTGGPIRA-SPLLLAIR  358 (360)
Q Consensus       325 -~~~~~l~~h~~~v~~~~~~~~g~~la-s~~~~~ir  358 (360)
                       +++.++.+|..-+..+.+.  ++++. +++|+.||
T Consensus       403 ~~c~~tl~~h~~~v~~l~~~--~~~Lvs~~aD~~Ik  436 (537)
T KOG0274|consen  403 RKCIHTLQGHTSLVSSLLLR--DNFLVSSSADGTIK  436 (537)
T ss_pred             hhhhhhhcCCcccccccccc--cceeEeccccccEE
Confidence             9999999999888766554  44444 44466554

>KOG1446|consensus

Probab=99.84  E-value=2e-19  Score=152.01  Aligned_cols=185  Identities=21%  Similarity=0.228  Sum_probs=138.8

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      .+.+.++.|.||...|.+++.+|.++.++|+|.|++|++||++..+|...+...  .-..++|.|+|-++|++...+.|+
T Consensus        88 ~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~--~~pi~AfDp~GLifA~~~~~~~Ik  165 (311)
T KOG1446|consen   88 HDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLS--GRPIAAFDPEGLIFALANGSELIK  165 (311)
T ss_pred             ecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecC--CCcceeECCCCcEEEEecCCCeEE
Confidence            566889999999999999999999999999999999999999988887777533  334678999999999998888999


Q ss_pred             EEEcccCe-eEeeeCCCCCCCCCCC---CCCCCC---------------ccccccceeEeeCCCCc---EEEEEEcCCCC
Q psy11015        248 IWQAVINW-ECLVSNNDNDSDLDES---KEPDES---------------SITLRTPVKELLGHSNV---VIAADWLSDGE  305 (360)
Q Consensus       248 vwd~~~~~-~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~~~~~~~~~~h~~~---v~~i~~sp~g~  305 (360)
                      +||++.-. .......-.......+   ....++               ..-.+....++.++...   -.+++|.|||+
T Consensus       166 LyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~  245 (311)
T KOG1446|consen  166 LYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSK  245 (311)
T ss_pred             EEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCc
Confidence            99998531 1111111110000000   000000               11123345556555432   25788999999


Q ss_pred             EEEEEECCCcEEEEECCCCeEEEEEec-CCCceEEEEEcCCCCEEEcccc
Q psy11015        306 QVITASWDRVANLFDVETGTILQSLTE-PGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       306 ~l~tgs~dg~i~iwd~~~~~~~~~l~~-h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ++++|+.||+|++|++++|..+..+.+ +.+++.++.|+|....++|+.-
T Consensus       246 Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s  295 (311)
T KOG1446|consen  246 FVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASS  295 (311)
T ss_pred             EEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCc
Confidence            999999999999999999999999998 6899999999999999988763

>KOG0300|consensus

Probab=99.84  E-value=8.6e-20  Score=154.16  Aligned_cols=169  Identities=19%  Similarity=0.298  Sum_probs=148.2

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC------CC------------------------
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST------QT------------------------  211 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~------~~------------------------  211 (360)
                      ...|..+++.|+.+|.||.+.|+++.|++.+.++++||.|++..||..      ..                        
T Consensus       172 A~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d  251 (481)
T KOG0300|consen  172 ARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTD  251 (481)
T ss_pred             eeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccc
Confidence            344556899999999999999999999999999999999999999961      10                        


Q ss_pred             ------C----eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccc
Q psy11015        212 ------G----KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITL  281 (360)
Q Consensus       212 ------~----~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (360)
                            +    .++..+.+|.+.|.+..|-..|+.+++++.|++..+||+.++                           
T Consensus       252 ~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtg---------------------------  304 (481)
T KOG0300|consen  252 SSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETG---------------------------  304 (481)
T ss_pred             cccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccC---------------------------
Confidence                  0    246778899999999999999999999999999999999988                           


Q ss_pred             ccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       282 ~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                       .++..+.||....+.++-+|..++++|+|.|.+.++||++.. ..+..|.+|...|+++.|.-+.+++.++.|.+|+
T Consensus       305 -e~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvK  381 (481)
T KOG0300|consen  305 -EVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVK  381 (481)
T ss_pred             -ceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEE
Confidence             467889999999999999999999999999999999999843 4578899999999999999888887777665543

>KOG0308|consensus

Probab=99.84  E-value=5.3e-20  Score=168.39  Aligned_cols=174  Identities=20%  Similarity=0.269  Sum_probs=149.4

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEE-CCCCCEEEEEeCCCcEEEEECCCC--eEEEE--------Ee-C
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTG--KCVLQ--------YS-G  220 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~-~~~~~~l~sgs~Dg~v~iwd~~~~--~~~~~--------~~-~  220 (360)
                      .++....+..|+......-++.++..|++-|.|+++ -++..++||||-|+.|.+||+.++  +.+..        +. |
T Consensus        90 S~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG  169 (735)
T KOG0308|consen   90 SASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSG  169 (735)
T ss_pred             EecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCC
Confidence            344444555566655555788999999999999998 778889999999999999999987  22322        23 7


Q ss_pred             CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE
Q psy11015        221 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW  300 (360)
Q Consensus       221 h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~  300 (360)
                      +..+|++++.++.|..|++|+..+.+++||.+++                            ..+..+.||+..|..+-.
T Consensus       170 ~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~----------------------------~kimkLrGHTdNVr~ll~  221 (735)
T KOG0308|consen  170 PKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTC----------------------------KKIMKLRGHTDNVRVLLV  221 (735)
T ss_pred             CccceeeeecCCcceEEEecCcccceEEeccccc----------------------------cceeeeeccccceEEEEE
Confidence            8889999999999999999999999999998876                            345667899999999999


Q ss_pred             cCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        301 LSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ++||..+++||.||+|++||+...+|+.++..|...|+++..+|+-..+.+|.-
T Consensus       222 ~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~r  275 (735)
T KOG0308|consen  222 NDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGR  275 (735)
T ss_pred             cCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCC
Confidence            999999999999999999999999999999999999999999998887777663

>KOG0264|consensus

Probab=99.84  E-value=7e-20  Score=161.32  Aligned_cols=159  Identities=23%  Similarity=0.298  Sum_probs=134.8

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC-------eEEEEEeCCCcCeEEEEEee-CCCEEEE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG-------KCVLQYSGHSGSVNSVRFLP-NKDLVLS  239 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~-------~~~~~~~~h~~~v~~i~~~p-~~~~l~s  239 (360)
                      .+.+-.+|.||++.-++|+|++... .|++|+.|++|++||+...       .+...+.+|...|..++|+| +..+|++
T Consensus       166 ~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~s  245 (422)
T KOG0264|consen  166 ECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGS  245 (422)
T ss_pred             cCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhhee
Confidence            4455568999999889999999655 8999999999999999743       35677899999999999998 4568899


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEE
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANL  318 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~i  318 (360)
                      ++.|+.+.|||++++ .                         .++.....+|++.|++++|+|-+ ..|||||.|++|++
T Consensus       246 v~dd~~L~iwD~R~~-~-------------------------~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~L  299 (422)
T KOG0264|consen  246 VGDDGKLMIWDTRSN-T-------------------------SKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVAL  299 (422)
T ss_pred             ecCCCeEEEEEcCCC-C-------------------------CCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEE
Confidence            999999999999963 1                         13566778899999999999954 56799999999999


Q ss_pred             EECCCC-eEEEEEecCCCceEEEEEcCCC-CEEEccc
Q psy11015        319 FDVETG-TILQSLTEPGEAIRAAAGRTGG-PIRASPL  353 (360)
Q Consensus       319 wd~~~~-~~~~~l~~h~~~v~~~~~~~~g-~~las~~  353 (360)
                      ||+|+. ++++++.+|...|..+.|+|.. .++||++
T Consensus       300 wDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg  336 (422)
T KOG0264|consen  300 WDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSG  336 (422)
T ss_pred             eechhcccCceeccCCCcceEEEEeCCCCCceeEecc
Confidence            999975 4689999999999999999965 5777665

>KOG2096|consensus

Probab=99.84  E-value=1e-19  Score=153.81  Aligned_cols=186  Identities=23%  Similarity=0.353  Sum_probs=129.7

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----eE-------------------------------E
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----KC-------------------------------V  215 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-----~~-------------------------------~  215 (360)
                      .+..|+||.+.|++++|+.+|..|+|++.|++|++|+++.-     ++                               +
T Consensus        78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l  157 (420)
T KOG2096|consen   78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL  157 (420)
T ss_pred             hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence            34578999999999999999999999999999999998631     01                               1


Q ss_pred             EEE-----------------------eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCC
Q psy11015        216 LQY-----------------------SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESK  272 (360)
Q Consensus       216 ~~~-----------------------~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~  272 (360)
                      ..|                       ..|...+-++-....+.+|++++.|.+|.+|++. |..+..+............
T Consensus       158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aav  236 (420)
T KOG2096|consen  158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAV  236 (420)
T ss_pred             EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccceee
Confidence            111                       0133344444445567789999999999999998 5544444433332222222


Q ss_pred             CC----------------------CCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC--------
Q psy11015        273 EP----------------------DESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE--------  322 (360)
Q Consensus       273 ~~----------------------~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~--------  322 (360)
                      ++                      .++.......+..+.||.+.|..++|+++...++|.|.||+++|||+.        
T Consensus       237 SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qD  316 (420)
T KOG2096|consen  237 SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQD  316 (420)
T ss_pred             CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCC
Confidence            21                      111222233567788999999999999999999999999999999863        


Q ss_pred             -----CC---------eE-------------------EEEE------------ecCCCceEEEEEcCCCCEEEcccccch
Q psy11015        323 -----TG---------TI-------------------LQSL------------TEPGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       323 -----~~---------~~-------------------~~~l------------~~h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                           .|         .+                   ++.+            +.|...|++++|+++|++++|..+..+
T Consensus       317 pk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGdr~v  396 (420)
T KOG2096|consen  317 PKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGDRYV  396 (420)
T ss_pred             chHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecceee
Confidence                 11         00                   1111            146678888889999999888888766


Q ss_pred             h
Q psy11015        358 R  358 (360)
Q Consensus       358 r  358 (360)
                      |
T Consensus       397 r  397 (420)
T KOG2096|consen  397 R  397 (420)
T ss_pred             e
Confidence            5

>KOG0269|consensus

Probab=99.84  E-value=1.4e-20  Score=175.25  Aligned_cols=173  Identities=18%  Similarity=0.305  Sum_probs=144.4

Q ss_pred             eecCCeEEEeeecCc-cceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015        153 KVQTSKIVSSFKTSL-LSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~  230 (360)
                      ...+++.+..|+... .....+..|..|+..|.++.|++... +|+|||.||+|++||++..+...++.+....|++|+|
T Consensus       105 T~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~f  184 (839)
T KOG0269|consen  105 TCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKF  184 (839)
T ss_pred             eecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceee
Confidence            456666777777665 34556678999999999999998655 8999999999999999999888999988899999999


Q ss_pred             ee-CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        231 LP-NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       231 ~p-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      +| .+..|+++...|.+.+||++..                           ..+...+..|.++|.++.|+|++.+|||
T Consensus       185 sp~~~~~F~s~~dsG~lqlWDlRqp---------------------------~r~~~k~~AH~GpV~c~nwhPnr~~lAT  237 (839)
T KOG0269|consen  185 SPGYGNKFASIHDSGYLQLWDLRQP---------------------------DRCEKKLTAHNGPVLCLNWHPNREWLAT  237 (839)
T ss_pred             ccCCCceEEEecCCceEEEeeccCc---------------------------hhHHHHhhcccCceEEEeecCCCceeee
Confidence            98 4678999999999999999865                           3456778899999999999999999999


Q ss_pred             EECCCcEEEEECCCCeE--EEEEecCCCceEEEEEcCCCC-EEEccc
Q psy11015        310 ASWDRVANLFDVETGTI--LQSLTEPGEAIRAAAGRTGGP-IRASPL  353 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~--~~~l~~h~~~v~~~~~~~~g~-~las~~  353 (360)
                      ||.|++|+|||+.+++.  ..++. ...+|..+.|-|..+ .|||.+
T Consensus       238 GGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcs  283 (839)
T KOG0269|consen  238 GGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCS  283 (839)
T ss_pred             cCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccchhhhhh
Confidence            99999999999986543  33443 456899999999765 555554

>KOG0640|consensus

Probab=99.84  E-value=4.1e-20  Score=155.62  Aligned_cols=161  Identities=19%  Similarity=0.301  Sum_probs=135.4

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC------------C------eEEEEEeCCCcCeEEEEEeeC
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT------------G------KCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~------------~------~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      ....+..|++++.+-+|+|||.+++|||.|..|+|.|++.            |      ..++++-.|...|+++.|+|.
T Consensus       104 Et~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr  183 (430)
T KOG0640|consen  104 ETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR  183 (430)
T ss_pred             ceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch
Confidence            3456788999999999999999999999999999999871            1      356777789999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  313 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d  313 (360)
                      ...|++|+.|++|++||+.+..                         ..+....+ ....+|.++.|+|.|.+++.|...
T Consensus       184 e~ILiS~srD~tvKlFDfsK~s-------------------------aKrA~K~~-qd~~~vrsiSfHPsGefllvgTdH  237 (430)
T KOG0640|consen  184 ETILISGSRDNTVKLFDFSKTS-------------------------AKRAFKVF-QDTEPVRSISFHPSGEFLLVGTDH  237 (430)
T ss_pred             hheEEeccCCCeEEEEecccHH-------------------------HHHHHHHh-hccceeeeEeecCCCceEEEecCC
Confidence            9999999999999999987541                         11122222 245689999999999999999999


Q ss_pred             CcEEEEECCCCeEEEEE---ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        314 RVANLFDVETGTILQSL---TEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       314 g~i~iwd~~~~~~~~~l---~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .++++||+.+.+|....   ..|.+.|+++.+++.|++-+|++ |+.||
T Consensus       238 p~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Ik  286 (430)
T KOG0640|consen  238 PTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIK  286 (430)
T ss_pred             CceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEE
Confidence            99999999999987665   36889999999999999888777 66665

>KOG0973|consensus

Probab=99.84  E-value=5.6e-20  Score=177.23  Aligned_cols=166  Identities=22%  Similarity=0.337  Sum_probs=142.2

Q ss_pred             CCCEEEEEECCCCCEEEEEe--CCCcEEEEECCC------------CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        180 RDGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQT------------GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs--~Dg~v~iwd~~~------------~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      +..|.+++.+|++..++||+  .||.++||+.+.            .+.+.+...|.+.|+|+.|+|||++||+||.|+.
T Consensus        13 ~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~   92 (942)
T KOG0973|consen   13 EKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRL   92 (942)
T ss_pred             CeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcce
Confidence            45689999999999999999  999999998753            2456777889999999999999999999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      |.||+....          .................|+.+..+.+|.+.|..++|+|++.+++++|.|++|.||+..+.+
T Consensus        93 v~iW~~~~~----------~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~  162 (942)
T KOG0973|consen   93 VMIWERAEI----------GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFE  162 (942)
T ss_pred             EEEeeeccc----------CCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccce
Confidence            999987631          0111111222333456678899999999999999999999999999999999999999999


Q ss_pred             EEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        326 ILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      .+..+++|.+.|-.+.|.|-|+++||-+|.
T Consensus       163 ~~~vl~~H~s~VKGvs~DP~Gky~ASqsdD  192 (942)
T KOG0973|consen  163 LLKVLRGHQSLVKGVSWDPIGKYFASQSDD  192 (942)
T ss_pred             eeeeeecccccccceEECCccCeeeeecCC
Confidence            999999999999999999999999998864

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.83  E-value=7.2e-19  Score=177.86  Aligned_cols=151  Identities=14%  Similarity=0.218  Sum_probs=127.1

Q ss_pred             CCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEEcccCee
Q psy11015        179 HRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       179 h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      +...|.+++|+|. +.+|++|+.||+|++||+.+++.+..+.+|.+.|++++|+| ++.+|++|+.|++|++||+.++. 
T Consensus       531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~-  609 (793)
T PLN00181        531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV-  609 (793)
T ss_pred             ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc-
Confidence            3468999999874 67999999999999999999999999999999999999997 78899999999999999998662 


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc-CCCCEEEEEECCCcEEEEECCCCe-EEEEEecCC
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL-SDGEQVITASWDRVANLFDVETGT-ILQSLTEPG  334 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s-p~g~~l~tgs~dg~i~iwd~~~~~-~~~~l~~h~  334 (360)
                                                 .+..+..+ ..|.++.|+ ++|.+|++|+.||.|++||++++. .+..+.+|.
T Consensus       610 ---------------------------~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~  661 (793)
T PLN00181        610 ---------------------------SIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHS  661 (793)
T ss_pred             ---------------------------EEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCC
Confidence                                       23444444 578999995 579999999999999999998765 567888999


Q ss_pred             CceEEEEEcCCCCEEEcccccchh
Q psy11015        335 EAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       335 ~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      ..|+++.|.+...+++++.|+.||
T Consensus       662 ~~V~~v~f~~~~~lvs~s~D~~ik  685 (793)
T PLN00181        662 KTVSYVRFVDSSTLVSSSTDNTLK  685 (793)
T ss_pred             CCEEEEEEeCCCEEEEEECCCEEE
Confidence            999999998544455555676664

>KOG0301|consensus

Probab=99.83  E-value=1.1e-19  Score=167.46  Aligned_cols=155  Identities=26%  Similarity=0.411  Sum_probs=140.2

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      .+++...+.||+..||++++-|.+ .++|||+|++|++|.-  ++++++|.||...|+.+++-|++ .|++|+.||.|++
T Consensus       129 ~~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~  204 (745)
T KOG0301|consen  129 IGELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRL  204 (745)
T ss_pred             chhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEE
Confidence            346677799999999999999987 8999999999999996  78899999999999999999765 5889999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  328 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~  328 (360)
                      |++..                             ..+....||+..|.+++..+++..+++++.||+++||+..  .+.+
T Consensus       205 w~~~g-----------------------------e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q  253 (745)
T KOG0301|consen  205 WDLDG-----------------------------EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQ  253 (745)
T ss_pred             EeccC-----------------------------ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEE
Confidence            99843                             3678889999999999988888999999999999999865  8889


Q ss_pred             EEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        329 SLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      .+..+...|+++.+-++|.+++.++|+-||
T Consensus       254 ~I~lPttsiWsa~~L~NgDIvvg~SDG~Vr  283 (745)
T KOG0301|consen  254 VITLPTTSIWSAKVLLNGDIVVGGSDGRVR  283 (745)
T ss_pred             EEecCccceEEEEEeeCCCEEEeccCceEE
Confidence            998778899999999999999999999887

>KOG0641|consensus

Probab=99.83  E-value=5.9e-19  Score=142.61  Aligned_cols=160  Identities=19%  Similarity=0.275  Sum_probs=124.9

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----------------------------------------
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----------------------------------------  212 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-----------------------------------------  212 (360)
                      +.-+.|.+.|+|.+|+|.|+++++|+.|++|++.-++..                                         
T Consensus        83 kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd  162 (350)
T KOG0641|consen   83 KRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD  162 (350)
T ss_pred             eeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence            344568999999999999999999999999998644321                                         


Q ss_pred             -----------eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccc
Q psy11015        213 -----------KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITL  281 (360)
Q Consensus       213 -----------~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (360)
                                 +..+.+.||++.|.++- +-+|-.|++|+.|.+|++||++.+.++...                     
T Consensus       163 c~iy~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l---------------------  220 (350)
T KOG0641|consen  163 CKIYITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTL---------------------  220 (350)
T ss_pred             ceEEEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeec---------------------
Confidence                       11233556777776652 235678999999999999999876443321                     


Q ss_pred             ccceeEeeC---CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        282 RTPVKELLG---HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       282 ~~~~~~~~~---h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                         -..+.+   .++.|.+++..|.|++|++|..|....+||++.+..++.+..|...|.++.|+|...++.|.+ |..|
T Consensus       221 ---~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~i  297 (350)
T KOG0641|consen  221 ---DNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKI  297 (350)
T ss_pred             ---cCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceE
Confidence               111111   246799999999999999999999999999999999999999999999999999998877665 6666


Q ss_pred             h
Q psy11015        358 R  358 (360)
Q Consensus       358 r  358 (360)
                      |
T Consensus       298 k  298 (350)
T KOG0641|consen  298 K  298 (350)
T ss_pred             E
Confidence            5

>KOG0302|consensus

Probab=99.83  E-value=1e-19  Score=156.77  Aligned_cols=156  Identities=21%  Similarity=0.359  Sum_probs=124.6

Q ss_pred             eeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC---eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      +.|.+|+..|-.++|+|... .|+|||.||+|+|||++.+   .++. .+.|.+.|+.|.|+....+|++|+.||+++||
T Consensus       251 ~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kAh~sDVNVISWnr~~~lLasG~DdGt~~iw  329 (440)
T KOG0302|consen  251 RPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-TKAHNSDVNVISWNRREPLLASGGDDGTLSIW  329 (440)
T ss_pred             ccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-eeccCCceeeEEccCCcceeeecCCCceEEEE
Confidence            44678999999999999754 9999999999999999988   3444 38899999999999888899999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeE--
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTI--  326 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~--  326 (360)
                      |++.-                         ....|+..+.-|..+|+++.|+|.. ..|++++.|..|.+||+..-.-  
T Consensus       330 DLR~~-------------------------~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~e  384 (440)
T KOG0302|consen  330 DLRQF-------------------------KSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEE  384 (440)
T ss_pred             Ehhhc-------------------------cCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChh
Confidence            99853                         3446899999999999999999954 5678888999999999852111  


Q ss_pred             --------------EEEEecC--CCceEEEEEcCC--CCEEEccccc
Q psy11015        327 --------------LQSLTEP--GEAIRAAAGRTG--GPIRASPLLL  355 (360)
Q Consensus       327 --------------~~~l~~h--~~~v~~~~~~~~--g~~las~~~~  355 (360)
                                    .+-+-.|  ...+..+.||++  |-++.|+.++
T Consensus       385 e~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG  431 (440)
T KOG0302|consen  385 EIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG  431 (440)
T ss_pred             hhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc
Confidence                          1112223  457888999986  4455566553

>KOG1332|consensus

Probab=99.83  E-value=5.8e-20  Score=149.94  Aligned_cols=178  Identities=22%  Similarity=0.293  Sum_probs=143.6

Q ss_pred             eeeecCCeEEEeeecCccce-eeeeeeecCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCe
Q psy11015        151 KLKVQTSKIVSSFKTSLLSC-YKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSV  225 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v  225 (360)
                      .........+.+|....... +++.+|.||.++|+.++|-.  -|.+|||++.||.|.||.-..|+  ....+..|.+.|
T Consensus        26 lATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SV  105 (299)
T KOG1332|consen   26 LATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASV  105 (299)
T ss_pred             eeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccc
Confidence            33455666777777766555 89999999999999999854  68899999999999999998874  455667899999


Q ss_pred             EEEEEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC
Q psy11015        226 NSVRFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  303 (360)
Q Consensus       226 ~~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~  303 (360)
                      ++|+|.|.  |-.|++++.||+|.|.+.+...                         .+........|.-.|++++|.|.
T Consensus       106 NsV~wapheygl~LacasSDG~vsvl~~~~~g-------------------------~w~t~ki~~aH~~GvnsVswapa  160 (299)
T KOG1332|consen  106 NSVAWAPHEYGLLLACASSDGKVSVLTYDSSG-------------------------GWTTSKIVFAHEIGVNSVSWAPA  160 (299)
T ss_pred             eeecccccccceEEEEeeCCCcEEEEEEcCCC-------------------------CccchhhhhccccccceeeecCc
Confidence            99999996  4578999999999999876431                         12234455679999999999985


Q ss_pred             ---C-----------CEEEEEECCCcEEEEECCCCeEE--EEEecCCCceEEEEEcCCC----CEEEccc
Q psy11015        304 ---G-----------EQVITASWDRVANLFDVETGTIL--QSLTEPGEAIRAAAGRTGG----PIRASPL  353 (360)
Q Consensus       304 ---g-----------~~l~tgs~dg~i~iwd~~~~~~~--~~l~~h~~~v~~~~~~~~g----~~las~~  353 (360)
                         |           +.|++|+.|..|+||+...+..+  .+|.+|.+-|+.+||.|.-    ..+||++
T Consensus       161 ~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~S  230 (299)
T KOG1332|consen  161 SAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCS  230 (299)
T ss_pred             CCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEec
Confidence               4           57999999999999999876543  4588999999999999863    4666655

>KOG0278|consensus

Probab=99.82  E-value=1.2e-20  Score=154.35  Aligned_cols=162  Identities=23%  Similarity=0.392  Sum_probs=148.6

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      ..++.-+-+|.||.+.||..+.+.+....+++++|=+.+|||.-+|..++.|. |..-|.+++|+.|..+|++|+.++.+
T Consensus        46 g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekll  124 (334)
T KOG0278|consen   46 GDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLL  124 (334)
T ss_pred             CCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHh
Confidence            36777889999999999999999988899999999999999999999999998 88999999999999999999999999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  326 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~  326 (360)
                      +|||++..                           ..+...+.+|++.|..+-|....+.|++++.|++||+||.++|..
T Consensus       125 rvfdln~p---------------------------~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~  177 (334)
T KOG0278|consen  125 RVFDLNRP---------------------------KAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTE  177 (334)
T ss_pred             hhhhccCC---------------------------CCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcE
Confidence            99998754                           235678889999999999999889999999999999999999999


Q ss_pred             EEEEecCCCceEEEEEcCCCCEEEcccccch
Q psy11015        327 LQSLTEPGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       327 ~~~l~~h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      ++++. ...+|+++..+++|.++.++..++|
T Consensus       178 v~sL~-~~s~VtSlEvs~dG~ilTia~gssV  207 (334)
T KOG0278|consen  178 VQSLE-FNSPVTSLEVSQDGRILTIAYGSSV  207 (334)
T ss_pred             EEEEe-cCCCCcceeeccCCCEEEEecCcee
Confidence            99997 4678999999999999999887665

>KOG0640|consensus

Probab=99.82  E-value=5.2e-20  Score=155.00  Aligned_cols=159  Identities=20%  Similarity=0.272  Sum_probs=134.5

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      ...+++|..|.++|+++.|+|....|++|+.|++|++||+....   ..+.|+ ...+|.++.|+|.|.+++.|..-.++
T Consensus       162 hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~  240 (430)
T KOG0640|consen  162 HPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTL  240 (430)
T ss_pred             CceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCce
Confidence            36789999999999999999999999999999999999997542   223344 56789999999999999999999999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  326 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~  326 (360)
                      ++||+.+-.+-..                         ...-.+|++.|+++.+++.|+.-+|||.||.|++||--+++|
T Consensus       241 rlYdv~T~Qcfvs-------------------------anPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rC  295 (430)
T KOG0640|consen  241 RLYDVNTYQCFVS-------------------------ANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRC  295 (430)
T ss_pred             eEEeccceeEeee-------------------------cCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHH
Confidence            9999987633321                         112346999999999999999999999999999999999999


Q ss_pred             EEEEe-cC-CCceEEEEEcCCCCEEEcccc
Q psy11015        327 LQSLT-EP-GEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       327 ~~~l~-~h-~~~v~~~~~~~~g~~las~~~  354 (360)
                      +.++. .| +..|.+..|..+|+++.|+..
T Consensus       296 v~t~~~AH~gsevcSa~Ftkn~kyiLsSG~  325 (430)
T KOG0640|consen  296 VRTIGNAHGGSEVCSAVFTKNGKYILSSGK  325 (430)
T ss_pred             HHHHHhhcCCceeeeEEEccCCeEEeecCC
Confidence            99885 35 458999999999998876653

>KOG0278|consensus

Probab=99.82  E-value=3.9e-19  Score=145.59  Aligned_cols=174  Identities=22%  Similarity=0.218  Sum_probs=143.2

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      .|...+++.+|...... .+..++.+|.+.|..+.|....+.++|++.|++||+||.+++..++++. ...+|+++.+++
T Consensus       117 tgg~ekllrvfdln~p~-App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~  194 (334)
T KOG0278|consen  117 TGGQEKLLRVFDLNRPK-APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQ  194 (334)
T ss_pred             ccchHHHhhhhhccCCC-CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeecc
Confidence            34445555555544322 3456889999999999999988899999999999999999999999998 677899999999


Q ss_pred             CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015        233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  312 (360)
Q Consensus       233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~  312 (360)
                      +|+++.+ ...+.|.+||..+-                            .++.... ....|.+.+++|+...+++|+.
T Consensus       195 dG~ilTi-a~gssV~Fwdaksf----------------------------~~lKs~k-~P~nV~SASL~P~k~~fVaGge  244 (334)
T KOG0278|consen  195 DGRILTI-AYGSSVKFWDAKSF----------------------------GLLKSYK-MPCNVESASLHPKKEFFVAGGE  244 (334)
T ss_pred             CCCEEEE-ecCceeEEeccccc----------------------------cceeecc-CccccccccccCCCceEEecCc
Confidence            9986654 56678999997643                            1233222 3457899999999999999999


Q ss_pred             CCcEEEEECCCCeEEEEE-ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        313 DRVANLFDVETGTILQSL-TEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       313 dg~i~iwd~~~~~~~~~l-~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |+.++.||..+|..+..+ ++|.++|.|+.|+|+|..-|+++ |++||
T Consensus       245 d~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTir  292 (334)
T KOG0278|consen  245 DFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIR  292 (334)
T ss_pred             ceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEE
Confidence            999999999999999886 89999999999999999888877 77776

>KOG0772|consensus

Probab=99.82  E-value=6.4e-20  Score=163.75  Aligned_cols=157  Identities=17%  Similarity=0.179  Sum_probs=124.7

Q ss_pred             eeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCe-EEEEEe-----CCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGK-CVLQYS-----GHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~-~~~~~~-----~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      +..-+||...++|.+|+|... .++|++.||++||||+...+ .+..+.     +..-++.+++|+|+|..||+|+.||.
T Consensus       261 m~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGS  340 (641)
T KOG0772|consen  261 MYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGS  340 (641)
T ss_pred             hhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCc
Confidence            344579999999999999754 89999999999999997653 344443     33456899999999999999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC--cEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      |.+|+.....                         .......-..|..  .|+|++||++|++|++-+.|+++++||++.
T Consensus       341 IQ~W~~~~~~-------------------------v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq  395 (641)
T KOG0772|consen  341 IQIWDKGSRT-------------------------VRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQ  395 (641)
T ss_pred             eeeeecCCcc-------------------------cccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccc
Confidence            9999974321                         1122344456776  899999999999999999999999999986


Q ss_pred             C-eEEEEEecC--CCceEEEEEcCCCCEEEcccc
Q psy11015        324 G-TILQSLTEP--GEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       324 ~-~~~~~l~~h--~~~v~~~~~~~~g~~las~~~  354 (360)
                      . +++.+..+.  .-+-+.++|+|+..+++||+-
T Consensus       396 ~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS  429 (641)
T KOG0772|consen  396 FKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTS  429 (641)
T ss_pred             cccchhhhcCCCccCCCCccccCCCceEEEeccc
Confidence            5 456665543  335688999999999998763

>KOG0294|consensus

Probab=99.82  E-value=3.8e-19  Score=150.09  Aligned_cols=152  Identities=21%  Similarity=0.298  Sum_probs=131.4

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC--EEEEEeCCCcEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD--LVLSASGDKSVHI  248 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~--~l~s~s~d~~i~v  248 (360)
                      ..+..+.+|.++|++++++  +++++|||.|-+|+|||+.....+..+-.|.+.|+++.|.+.-.  .|++|+.||.|.+
T Consensus        34 ~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~i  111 (362)
T KOG0294|consen   34 KPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIII  111 (362)
T ss_pred             eccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEE
Confidence            3466788999999999998  78999999999999999999998999999999999999998764  8999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  328 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~  328 (360)
                      |++.                            .|..+.++.+|.+.|+.++.+|.|+.-++.+.|+.+++||+-+|+.-.
T Consensus       112 w~~~----------------------------~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~  163 (362)
T KOG0294|consen  112 WRVG----------------------------SWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAF  163 (362)
T ss_pred             EEcC----------------------------CeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccce
Confidence            9975                            345688999999999999999999999999999999999999988766


Q ss_pred             EEecCCCceEEEEEcCCCCEEEccc
Q psy11015        329 SLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      .++- ...-+.+.|+|.|.+++-..
T Consensus       164 v~~L-~~~at~v~w~~~Gd~F~v~~  187 (362)
T KOG0294|consen  164 VLNL-KNKATLVSWSPQGDHFVVSG  187 (362)
T ss_pred             eecc-CCcceeeEEcCCCCEEEEEe
Confidence            5542 22335589999998665443

>KOG0303|consensus

Probab=99.82  E-value=1.8e-19  Score=156.15  Aligned_cols=152  Identities=24%  Similarity=0.339  Sum_probs=129.6

Q ss_pred             eeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCC-------eEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCC
Q psy11015        173 IRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTG-------KCVLQYSGHSGSVNSVRFLPNK-DLVLSASGD  243 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~-------~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d  243 (360)
                      .-.+.||+++|..++|+|- ...|||||.|.+|.||.+..+       +++..+.||...|--++|+|.. +.|++++.|
T Consensus        74 ~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~D  153 (472)
T KOG0303|consen   74 YPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSD  153 (472)
T ss_pred             CCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCC
Confidence            3456799999999999994 458999999999999999754       5688899999999999999975 578999999


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      .+|.+|++.+|...                            .++. |...|++++|+.+|.+++|.+.|..|||||.++
T Consensus       154 n~v~iWnv~tgeal----------------------------i~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~  204 (472)
T KOG0303|consen  154 NTVSIWNVGTGEAL----------------------------ITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRR  204 (472)
T ss_pred             ceEEEEeccCCcee----------------------------eecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCC
Confidence            99999999988433                            3344 999999999999999999999999999999999


Q ss_pred             CeEEEEEecCCC-ceEEEEEcCCCCEEEccc
Q psy11015        324 GTILQSLTEPGE-AIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       324 ~~~~~~l~~h~~-~v~~~~~~~~g~~las~~  353 (360)
                      ++.+..-.+|.+ .-..+.|-.+|.++.|+.
T Consensus       205 ~~~v~e~~~heG~k~~Raifl~~g~i~tTGf  235 (472)
T KOG0303|consen  205 GTVVSEGVAHEGAKPARAIFLASGKIFTTGF  235 (472)
T ss_pred             CcEeeecccccCCCcceeEEeccCceeeecc
Confidence            999988877765 334456778888766664

>KOG0305|consensus

Probab=99.82  E-value=3.2e-19  Score=163.61  Aligned_cols=168  Identities=24%  Similarity=0.221  Sum_probs=145.3

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC-CCcCeEEEEEeeCCCEEEEE
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLVLSA  240 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~~~p~~~~l~s~  240 (360)
                      ++.|...++........+.+.|+++.|+++|.+|+.|..+|.|.|||....+.+..+.+ |.+.|-+++|.  +..+.+|
T Consensus       199 vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssG  276 (484)
T KOG0305|consen  199 VYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSG  276 (484)
T ss_pred             EEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEe
Confidence            45566666665555555589999999999999999999999999999999999999998 99999999996  6689999


Q ss_pred             eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy11015        241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD  320 (360)
Q Consensus       241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd  320 (360)
                      +.|+.|..+|++.....                           ...+.+|...|..++|++++.++|+|+.|+.+.|||
T Consensus       277 sr~~~I~~~dvR~~~~~---------------------------~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd  329 (484)
T KOG0305|consen  277 SRDGKILNHDVRISQHV---------------------------VSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWD  329 (484)
T ss_pred             cCCCcEEEEEEecchhh---------------------------hhhhhcccceeeeeEECCCCCeeccCCCccceEecc
Confidence            99999999999866222                           224788999999999999999999999999999999


Q ss_pred             CCCCeEEEEEecCCCceEEEEEcC-CCCEEEcccccchh
Q psy11015        321 VETGTILQSLTEPGEAIRAAAGRT-GGPIRASPLLLAIR  358 (360)
Q Consensus       321 ~~~~~~~~~l~~h~~~v~~~~~~~-~g~~las~~~~~ir  358 (360)
                      .....+...+..|...|.+++|+| ...+||+|...+-|
T Consensus       330 ~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~  368 (484)
T KOG0305|consen  330 GLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR  368 (484)
T ss_pred             CCCccccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence            988888999999999999999999 45788888755433

>KOG0305|consensus

Probab=99.82  E-value=4.8e-19  Score=162.45  Aligned_cols=155  Identities=15%  Similarity=0.291  Sum_probs=132.8

Q ss_pred             eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee-CCCEEEEEe--CCCcEEEEEc
Q psy11015        175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSAS--GDKSVHIWQA  251 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p-~~~~l~s~s--~d~~i~vwd~  251 (360)
                      ++.+|...|..+.|++++.++|+|+.|+.+.|||.....+...+..|.+.|.+++|+| ...+||+|+  .|++|++||.
T Consensus       296 ~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~  375 (484)
T KOG0305|consen  296 TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNT  375 (484)
T ss_pred             hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEc
Confidence            4789999999999999999999999999999999988888999999999999999999 456888865  5999999999


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE--ECCCcEEEEECCCCeEEEE
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA--SWDRVANLFDVETGTILQS  329 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg--s~dg~i~iwd~~~~~~~~~  329 (360)
                      .++..                            +..+. -.+.|.++.|++..+-|+++  ..+..|.||+..+.+.+..
T Consensus       376 ~~g~~----------------------------i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~  426 (484)
T KOG0305|consen  376 NTGAR----------------------------IDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAE  426 (484)
T ss_pred             CCCcE----------------------------ecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeee
Confidence            87732                            22222 34689999999998777664  3467899999999999999


Q ss_pred             EecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        330 LTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       330 l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +.+|...|..++++|+|..+++++ |.++|
T Consensus       427 l~gH~~RVl~la~SPdg~~i~t~a~DETlr  456 (484)
T KOG0305|consen  427 LLGHTSRVLYLALSPDGETIVTGAADETLR  456 (484)
T ss_pred             ecCCcceeEEEEECCCCCEEEEecccCcEE
Confidence            999999999999999998888776 55554

>KOG0308|consensus

Probab=99.81  E-value=9.4e-20  Score=166.76  Aligned_cols=191  Identities=20%  Similarity=0.265  Sum_probs=160.1

Q ss_pred             eeeeecCCeEEEeeecCccce----eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--eEEEEEeCCCc
Q psy11015        150 NKLKVQTSKIVSSFKTSLLSC----YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSG  223 (360)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~~~h~~  223 (360)
                      ..|.|.+..++..|.......    ..+..++.|.++|+.++...+++.|+|+|.|-+|++|+...+  -|..++..|..
T Consensus        39 yLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~D  118 (735)
T KOG0308|consen   39 YLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKD  118 (735)
T ss_pred             eEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccc
Confidence            467888888888888765433    257888999999999999999999999999999999999877  57888889999


Q ss_pred             CeEEEEE-eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEc
Q psy11015        224 SVNSVRF-LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWL  301 (360)
Q Consensus       224 ~v~~i~~-~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~s  301 (360)
                      .|.|+++ .++..++++||.|+.|.+||+.++........                  .......+. |+...|++++.+
T Consensus       119 YVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~------------------n~~t~~sl~sG~k~siYSLA~N  180 (735)
T KOG0308|consen  119 YVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASF------------------NNVTVNSLGSGPKDSIYSLAMN  180 (735)
T ss_pred             hheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhc------------------cccccccCCCCCccceeeeecC
Confidence            9999999 77888999999999999999998733110000                  001222333 888999999999


Q ss_pred             CCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEcccccchh
Q psy11015        302 SDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPLLLAIR  358 (360)
Q Consensus       302 p~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~~~~ir  358 (360)
                      +.|..|++|+..+.+++||.++++.+..+++|...|.++..+++|. ++.+++|++||
T Consensus       181 ~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIr  238 (735)
T KOG0308|consen  181 QTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIR  238 (735)
T ss_pred             CcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEE
Confidence            9999999999999999999999999999999999999999999996 55566688887

>KOG0647|consensus

Probab=99.81  E-value=4.3e-19  Score=148.99  Aligned_cols=135  Identities=27%  Similarity=0.477  Sum_probs=112.8

Q ss_pred             cCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCC-CeEE-EEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        178 GHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCV-LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       178 ~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~-~~~~-~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      .-.+.|.+|+|+| ...+++.||-||+||+|++.. |..+ +....|.++|.+++|+.+|..+++|+.|+.+++||+.++
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~  104 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG  104 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence            3567899999999 455777999999999999976 3322 334569999999999999999999999999999999987


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC--EEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE--QVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~--~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                                                   .+..+..|.++|..+.|-+...  .|+|||+|.+|+.||++...++.++.-
T Consensus       105 -----------------------------Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L  155 (347)
T KOG0647|consen  105 -----------------------------QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL  155 (347)
T ss_pred             -----------------------------CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec
Confidence                                         4667778999999999987666  789999999999999999998888864


Q ss_pred             CCCceEEEEE
Q psy11015        333 PGEAIRAAAG  342 (360)
Q Consensus       333 h~~~v~~~~~  342 (360)
                      + ..+.++..
T Consensus       156 P-eRvYa~Dv  164 (347)
T KOG0647|consen  156 P-ERVYAADV  164 (347)
T ss_pred             c-ceeeehhc
Confidence            3 34554443

>KOG0294|consensus

Probab=99.81  E-value=2.1e-18  Score=145.62  Aligned_cols=190  Identities=17%  Similarity=0.249  Sum_probs=146.6

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCC--EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~--~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      .....+..+-.|.+.|+++.|.+...  .|++|+.||.|.+|+.....++..+++|.+.|+.++.+|.|++-++.+.|+.
T Consensus        71 ~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~  150 (362)
T KOG0294|consen   71 RKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQV  150 (362)
T ss_pred             cchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCce
Confidence            34445566778999999999998765  8999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCC-ccccccceeEee----------CCCCcEEEEEEcCCCCEEEEEECCC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDES-SITLRTPVKELL----------GHSNVVIAADWLSDGEQVITASWDR  314 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~h~~~v~~i~~sp~g~~l~tgs~dg  314 (360)
                      ++.||+.+|+.....+....+....+....+. .......+..+.          .....+.++.|. ++.++++|+.|+
T Consensus       151 lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~  229 (362)
T KOG0294|consen  151 LRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGDNE  229 (362)
T ss_pred             eeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeec-CCceEEEecCCc
Confidence            99999999877666555544444333322221 111111111111          122346777776 677999999999


Q ss_pred             cEEEEECCCCeEEEEEecCCCceEEEEE--cCCCCEEEccc-ccchh
Q psy11015        315 VANLFDVETGTILQSLTEPGEAIRAAAG--RTGGPIRASPL-LLAIR  358 (360)
Q Consensus       315 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~--~~~g~~las~~-~~~ir  358 (360)
                      .|.+||...+.++..+.+|...|-++++  .|.+.+++|++ |+-||
T Consensus       230 ~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~  276 (362)
T KOG0294|consen  230 WISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIK  276 (362)
T ss_pred             eEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEE
Confidence            9999999999999999999999999985  46778888766 55554

>KOG0267|consensus

Probab=99.81  E-value=4.1e-20  Score=170.93  Aligned_cols=165  Identities=23%  Similarity=0.361  Sum_probs=151.9

Q ss_pred             cCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        165 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       165 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      |+.+....+++|.||...+..|.|+|-+.++++|+.|+-+++||.+...|...+.+|...|..+.|+|+|+++++|+.|.
T Consensus        97 wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~  176 (825)
T KOG0267|consen   97 WDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDN  176 (825)
T ss_pred             eehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcc
Confidence            34567788899999999999999999999999999999999999998899999999999999999999999999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      ++++||+..|                            .....|.+|.+.+.++.|+|..-.+++||.|+++++||+++.
T Consensus       177 tvki~d~~ag----------------------------k~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletf  228 (825)
T KOG0267|consen  177 TVKIWDLTAG----------------------------KLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETF  228 (825)
T ss_pred             eeeeeccccc----------------------------ccccccccccccccccccCchhhhhccCCCCceeeeecccee
Confidence            9999998766                            456778899999999999999889999999999999999999


Q ss_pred             eEEEEEecCCCceEEEEEcCCCCEEEcccccch
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      +.+.........|.+.+|+|+|..+.++.....
T Consensus       229 e~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~sl  261 (825)
T KOG0267|consen  229 EVISSGKPETDGVRSLAFNPDGKIVLSGEQISL  261 (825)
T ss_pred             EEeeccCCccCCceeeeecCCceeeecCchhhh
Confidence            998888888889999999999999998875443

>KOG0646|consensus

Probab=99.80  E-value=3.4e-19  Score=157.42  Aligned_cols=184  Identities=15%  Similarity=0.196  Sum_probs=148.3

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC---------CCeEEEEEeCCCcCeEEEEEee
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---------TGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~---------~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      .+.|...+|.++..+.+|-..|+|+.|+.||.+|+|||.||.|.+|.+-         +.+++..|.+|.-+|+++...+
T Consensus       105 lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~  184 (476)
T KOG0646|consen  105 LYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGS  184 (476)
T ss_pred             EEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecC
Confidence            4778888999999999999999999999999999999999999999873         3468899999999999999876


Q ss_pred             CC--CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC--------CCCCCCC---------------------cccc
Q psy11015        233 NK--DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE--------SKEPDES---------------------SITL  281 (360)
Q Consensus       233 ~~--~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---------------------~~~~  281 (360)
                      .|  .+++|+|.|.++++||+..+........+.......        ......+                     ....
T Consensus       185 Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~  264 (476)
T KOG0646|consen  185 GGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEE  264 (476)
T ss_pred             CCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccc
Confidence            53  589999999999999999987665544441111000        0000000                     0122


Q ss_pred             ccceeEeeCCCC--cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCC
Q psy11015        282 RTPVKELLGHSN--VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       282 ~~~~~~~~~h~~--~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~  345 (360)
                      .+....+.||.+  .|+|++++-||..|++|+.||.++|||+.+.++++++..-.++|+.+.+.|-
T Consensus       265 ~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~  330 (476)
T KOG0646|consen  265 NTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPL  330 (476)
T ss_pred             cceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeecc
Confidence            345677889988  9999999999999999999999999999999999999867889999988553

>KOG0772|consensus

Probab=99.80  E-value=5e-19  Score=158.11  Aligned_cols=166  Identities=20%  Similarity=0.192  Sum_probs=124.4

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC---------------------------eEEEE-----
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---------------------------KCVLQ-----  217 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~---------------------------~~~~~-----  217 (360)
                      +..-..+.+|+..|.++++.|.|-.|+|||.|-+|++||+..-                           ..+..     
T Consensus       157 ~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~a  236 (641)
T KOG0772|consen  157 GSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSA  236 (641)
T ss_pred             ccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCc
Confidence            3455678899999999999999999999999999999998621                           11111     


Q ss_pred             ---------------------------EeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCC
Q psy11015        218 ---------------------------YSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLD  269 (360)
Q Consensus       218 ---------------------------~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~  269 (360)
                                                 -+||...++|.+|+|+. ..|++++.||++++||+..........        
T Consensus       237 qakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVi--------  308 (641)
T KOG0772|consen  237 QAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVI--------  308 (641)
T ss_pred             ceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEE--------
Confidence                                       14788999999999975 578999999999999987653221100        


Q ss_pred             CCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe--E-EEEEecCCC--ceEEEEEcC
Q psy11015        270 ESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT--I-LQSLTEPGE--AIRAAAGRT  344 (360)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~--~-~~~l~~h~~--~v~~~~~~~  344 (360)
                                    ......+..-++++++|+|+|..||+|+.||.|.+|+.....  . ...-.+|..  .|++++|++
T Consensus       309 --------------k~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~  374 (641)
T KOG0772|consen  309 --------------KTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSY  374 (641)
T ss_pred             --------------eeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEecc
Confidence                          001111334578999999999999999999999999975432  1 223345755  999999999


Q ss_pred             CCCEEEccc-ccch
Q psy11015        345 GGPIRASPL-LLAI  357 (360)
Q Consensus       345 ~g~~las~~-~~~i  357 (360)
                      +|++|+|=+ |.++
T Consensus       375 dg~~LlSRg~D~tL  388 (641)
T KOG0772|consen  375 DGNYLLSRGFDDTL  388 (641)
T ss_pred             ccchhhhccCCCce
Confidence            999998754 4443

>KOG0301|consensus

Probab=99.80  E-value=4.5e-19  Score=163.44  Aligned_cols=157  Identities=25%  Similarity=0.416  Sum_probs=139.5

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      ......++.+|.||+..|.|++...++. ++|||.|.++++|-.  +++...+++|..+|+++++-|++ .++|||.|++
T Consensus        87 ~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKt  162 (745)
T KOG0301|consen   87 KLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTGSADKT  162 (745)
T ss_pred             ecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC-cEEeccCcce
Confidence            3456678899999999999999888775 999999999999985  56667799999999999999988 8899999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      |++|.-.                              +.+.++.||.+.|+++++-|++ .|++++.||.|++|++ +|.
T Consensus       163 IklWk~~------------------------------~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge  210 (745)
T KOG0301|consen  163 IKLWKGG------------------------------TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGE  210 (745)
T ss_pred             eeeccCC------------------------------chhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCc
Confidence            9999743                              4688999999999999998764 6889999999999998 799


Q ss_pred             EEEEEecCCCceEEEE-EcCCCCEEEcccccchh
Q psy11015        326 ILQSLTEPGEAIRAAA-GRTGGPIRASPLLLAIR  358 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~-~~~~g~~las~~~~~ir  358 (360)
                      ++.++.+|..-|.++. .++++.++.+|.|.++|
T Consensus       211 ~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlr  244 (745)
T KOG0301|consen  211 VLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLR  244 (745)
T ss_pred             eeeeeeccceEEEEEEecCCCCeEEEecCCceEE
Confidence            9999999999999999 67788888899998876

>KOG0313|consensus

Probab=99.80  E-value=3e-18  Score=147.93  Aligned_cols=199  Identities=25%  Similarity=0.314  Sum_probs=150.6

Q ss_pred             eeeeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCC---EEEEEeCCCcEEEEECCCCe----EEEEEeC
Q psy11015        148 TTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQP---VLGSASADRTVRLWSTQTGK----CVLQYSG  220 (360)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~---~l~sgs~Dg~v~iwd~~~~~----~~~~~~~  220 (360)
                      ....+.+.-+++...|..   .|..+.++.||.++|.+++|.-...   .|++||.|.++++|-.+.+.    ++....|
T Consensus       115 ~~~IltgsYDg~~riWd~---~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~G  191 (423)
T KOG0313|consen  115 SKWILTGSYDGTSRIWDL---KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRG  191 (423)
T ss_pred             CceEEEeecCCeeEEEec---CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcc
Confidence            445566666666666654   5788899999999999888754333   59999999999999998773    4455569


Q ss_pred             CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE
Q psy11015        221 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW  300 (360)
Q Consensus       221 h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~  300 (360)
                      |...|-+|...++|..+++||.|.++++|+..+.... .+.  ..................+.|+.++.||..+|.++.|
T Consensus       192 Hk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~-~~E--~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w  268 (423)
T KOG0313|consen  192 HKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEED-ELE--SSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVW  268 (423)
T ss_pred             cccceeEEEecCCCCeEEeecccceeeecccCCCccc-ccc--ccchhhhhhhhhhhcccccCceEEecccccceeeEEE
Confidence            9999999999999999999999999999994322100 000  0000000000011123445689999999999999999


Q ss_pred             cCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        301 LSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ++ ...++++|+|.+|+.||+.++..+.++.+ ..+++++..+|...++++|+.
T Consensus       269 ~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gss  320 (423)
T KOG0313|consen  269 SD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSS  320 (423)
T ss_pred             cC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCC
Confidence            97 77899999999999999999999988875 467999999999888887763

>KOG0299|consensus

Probab=99.79  E-value=9.1e-18  Score=148.24  Aligned_cols=152  Identities=26%  Similarity=0.345  Sum_probs=133.2

Q ss_pred             ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015        177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      ++|...|.++++++|+.+|++|+.|..|.||+.++.+.++.+.+|.+.|.+++|-.....+++++.|+++++|++...  
T Consensus       199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~--  276 (479)
T KOG0299|consen  199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL--  276 (479)
T ss_pred             ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHh--
Confidence            489999999999999999999999999999999999999999999999999999887788999999999999998643  


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA  336 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~  336 (360)
                                                ..+.++.||.+.|.++.-...++.+-+|+.|+++++|++.. ..--.+.+|.+.
T Consensus       277 --------------------------s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~s  329 (479)
T KOG0299|consen  277 --------------------------SYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGS  329 (479)
T ss_pred             --------------------------HHHHHHhCCccceeeechhcccceEEeccccceeEEEeccc-cceeeeeCCCCC
Confidence                                      45778899999999999887777777788999999999953 333467788999


Q ss_pred             eEEEEEcCCCCEEEcccccch
Q psy11015        337 IRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       337 v~~~~~~~~g~~las~~~~~i  357 (360)
                      +-|++|-.+..++..+.++.|
T Consensus       330 idcv~~In~~HfvsGSdnG~I  350 (479)
T KOG0299|consen  330 IDCVAFINDEHFVSGSDNGSI  350 (479)
T ss_pred             eeeEEEecccceeeccCCceE
Confidence            999999877777666666654

>KOG1036|consensus

Probab=99.79  E-value=5.5e-18  Score=142.80  Aligned_cols=180  Identities=17%  Similarity=0.166  Sum_probs=132.0

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~  253 (360)
                      +..-.|..++.+++|.++ ..+++|+.||.|+.+|+.++.... +..|..+|.||.+++....+++||.|++|++||.+.
T Consensus        48 ~~~~~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~~~-igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~  125 (323)
T KOG1036|consen   48 KLKFKHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNEDQ-IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN  125 (323)
T ss_pred             hhheecCCceeeeeccCC-ceEEEeccCceEEEEEecCCccee-eccCCCceEEEEeeccCCeEEEcccCccEEEEeccc
Confidence            333468999999999984 489999999999999999887544 445999999999999888999999999999999884


Q ss_pred             CeeEeeeCCC----------------------------CCC-CCCC-C-----------CCCC-----------------
Q psy11015        254 NWECLVSNND----------------------------NDS-DLDE-S-----------KEPD-----------------  275 (360)
Q Consensus       254 ~~~~~~~~~~----------------------------~~~-~~~~-~-----------~~~~-----------------  275 (360)
                      ..........                            ... +... .           ..++                 
T Consensus       126 ~~~~~~~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~  205 (323)
T KOG1036|consen  126 KVVVGTFDQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEY  205 (323)
T ss_pred             cccccccccCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEc
Confidence            2111110000                            000 0000 0           0000                 


Q ss_pred             -CCccccccceeEeeCCC---------CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCC
Q psy11015        276 -ESSITLRTPVKELLGHS---------NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       276 -~~~~~~~~~~~~~~~h~---------~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~  345 (360)
                       +...........|..|.         .+|++++|+|-...|+||+.||.|.+||..+.+.+..+......|.+++|+.+
T Consensus       206 ~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~d  285 (323)
T KOG1036|consen  206 FDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMD  285 (323)
T ss_pred             cCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccC
Confidence             00000111234455553         27999999999999999999999999999999999999888888999999999


Q ss_pred             CCEEEccccc
Q psy11015        346 GPIRASPLLL  355 (360)
Q Consensus       346 g~~las~~~~  355 (360)
                      |..||.|...
T Consensus       286 G~~LAia~sy  295 (323)
T KOG1036|consen  286 GSLLAIASSY  295 (323)
T ss_pred             CCeEEEEech
Confidence            9999987753

>KOG0639|consensus

Probab=99.79  E-value=8.5e-19  Score=156.22  Aligned_cols=200  Identities=12%  Similarity=0.132  Sum_probs=158.9

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      |.....+++|+....+.....++....-..++++.+||.++.++++.||.|.|||+.....++.|+||...+.||..+++
T Consensus       483 GGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~d  562 (705)
T KOG0639|consen  483 GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKD  562 (705)
T ss_pred             ccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCC
Confidence            33344455666666666666677766677889999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCc-------------cccccceeEeeCCCCcEEEEEE
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESS-------------ITLRTPVKELLGHSNVVIAADW  300 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~h~~~v~~i~~  300 (360)
                      |..|.+|+-|.+|+-||++.+.......... ..+.....+...+             -..+.....+.-|.+-|.++.|
T Consensus       563 GtklWTGGlDntvRcWDlregrqlqqhdF~S-QIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKF  641 (705)
T KOG0639|consen  563 GTKLWTGGLDNTVRCWDLREGRQLQQHDFSS-QIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKF  641 (705)
T ss_pred             CceeecCCCccceeehhhhhhhhhhhhhhhh-hheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEe
Confidence            9999999999999999999987765543321 1111111111111             1122344566778999999999


Q ss_pred             cCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        301 LSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      .+.|+++++.+.|..+..|.+.-|..+...+ ...+|.++.++-|.++++|++..
T Consensus       642 a~cGkwfvStGkDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGd  695 (705)
T KOG0639|consen  642 AYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTGSGD  695 (705)
T ss_pred             cccCceeeecCchhhhhhccCccccceeecc-ccCcceeeeeccCceEEEecCCC
Confidence            9999999999999999999999898877776 45689999999999999998753

>KOG4283|consensus

Probab=99.79  E-value=2.3e-18  Score=144.26  Aligned_cols=181  Identities=19%  Similarity=0.246  Sum_probs=133.5

Q ss_pred             ecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCe------------EEE---EEeCCCcCeEEEEEee-CCCEEEE
Q psy11015        177 SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGK------------CVL---QYSGHSGSVNSVRFLP-NKDLVLS  239 (360)
Q Consensus       177 ~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~------------~~~---~~~~h~~~v~~i~~~p-~~~~l~s  239 (360)
                      ..|.+.|+++.+.+ .|+++++|++||.|-+||++...            |+.   --.+|...|.++.|.| |.-.|.+
T Consensus        40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts  119 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS  119 (397)
T ss_pred             ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence            46889999999988 57799999999999999997432            110   0136888899999999 4457888


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCC------CCCCCC-----CCC-----CCCCccccccceeEeeCCCCcEEEEEEcCC
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDN------DSDLDE-----SKE-----PDESSITLRTPVKELLGHSNVVIAADWLSD  303 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~------~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~  303 (360)
                      +|.|.+++|||..+........-..      .++...     +..     ...+.+..+...+++.||.+.|.++.|+|.
T Consensus       120 sSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~  199 (397)
T KOG4283|consen  120 SSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPS  199 (397)
T ss_pred             ccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccC
Confidence            9999999999999876655433321      111111     011     112235566778999999999999999999


Q ss_pred             CCE-EEEEECCCcEEEEECCCC-eEEEEEe--------------cCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        304 GEQ-VITASWDRVANLFDVETG-TILQSLT--------------EPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       304 g~~-l~tgs~dg~i~iwd~~~~-~~~~~l~--------------~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      ..+ |+||+.||.|++||++.. .|...+.              .|.+.|..+||+.+|.++++-. |..+
T Consensus       200 ~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~  270 (397)
T KOG4283|consen  200 SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRI  270 (397)
T ss_pred             ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccce
Confidence            887 589999999999999854 3444433              4667899999999999887654 4433

>KOG1273|consensus

Probab=99.77  E-value=8.4e-18  Score=142.08  Aligned_cols=177  Identities=16%  Similarity=0.128  Sum_probs=134.3

Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015        183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNN  262 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~  262 (360)
                      -.|+.|++-|.+||.|+.||.|.|||+.+....+.+.+|..+|.+++|+++|+.|+|+|.|..|.+||+..|.....+..
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf  105 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF  105 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence            67899999999999999999999999999988889999999999999999999999999999999999999976555444


Q ss_pred             CCCCCCCCCCCCCCCc------------cccccceeEeeCCC------CcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        263 DNDSDLDESKEPDESS------------ITLRTPVKELLGHS------NVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       263 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~h~------~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      +...-.....+.....            .....+.+.+....      ....+..|.+.|+++++|...|.+.++|..+.
T Consensus       106 ~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~  185 (405)
T KOG1273|consen  106 DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL  185 (405)
T ss_pred             cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence            3222222211111110            01111222221110      11223348889999999999999999999999


Q ss_pred             eEEEEEecCC-CceEEEEEcCCCCEEE-cccccchhc
Q psy11015        325 TILQSLTEPG-EAIRAAAGRTGGPIRA-SPLLLAIRS  359 (360)
Q Consensus       325 ~~~~~l~~h~-~~v~~~~~~~~g~~la-s~~~~~ir~  359 (360)
                      +++..++... ..|..+.++..|..++ -.+|..||+
T Consensus       186 e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~  222 (405)
T KOG1273|consen  186 ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRT  222 (405)
T ss_pred             eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEE
Confidence            9999998766 7899999999998665 455888886

>KOG0268|consensus

Probab=99.77  E-value=2.1e-18  Score=148.14  Aligned_cols=183  Identities=19%  Similarity=0.245  Sum_probs=132.4

Q ss_pred             eeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      +..|.||.++|.|++=+|.. ..++||+.||.|++||+.+..++..+++|.|.|..|++..  ..+++++.|++|+.|-+
T Consensus        59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~  136 (433)
T KOG0268|consen   59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKI  136 (433)
T ss_pred             hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeec
Confidence            44567999999999999976 5899999999999999999999999999999999999975  67899999999999986


Q ss_pred             ccCeeEeeeCCCCCCC-------CCCCC----CCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEECCCcEEEE
Q psy11015        252 VINWECLVSNNDNDSD-------LDESK----EPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLF  319 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~dg~i~iw  319 (360)
                      ... ....+.....-.       .....    ....+......|+..+......|.++.|+|... .|++|+.|+.|.+|
T Consensus       137 ~~~-p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLy  215 (433)
T KOG0268|consen  137 DGP-PLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLY  215 (433)
T ss_pred             cCC-cceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEE
Confidence            642 111111110000       00000    112334444557777777777788888888654 45666688888888


Q ss_pred             ECCCCeEEEE------------------------------------------EecCCCceEEEEEcCCCCEEEccc-ccc
Q psy11015        320 DVETGTILQS------------------------------------------LTEPGEAIRAAAGRTGGPIRASPL-LLA  356 (360)
Q Consensus       320 d~~~~~~~~~------------------------------------------l~~h~~~v~~~~~~~~g~~las~~-~~~  356 (360)
                      |++++.+++.                                          ..+|.++|.+++|+|.|.=++||+ |-+
T Consensus       216 D~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDks  295 (433)
T KOG0268|consen  216 DLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKS  295 (433)
T ss_pred             ecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccce
Confidence            8877655432                                          346777889999999987665554 666


Q ss_pred             hh
Q psy11015        357 IR  358 (360)
Q Consensus       357 ir  358 (360)
                      ||
T Consensus       296 IR  297 (433)
T KOG0268|consen  296 IR  297 (433)
T ss_pred             EE
Confidence            65

>KOG1539|consensus

Probab=99.77  E-value=2.6e-17  Score=154.78  Aligned_cols=174  Identities=19%  Similarity=0.200  Sum_probs=140.6

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE---eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~---~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      -...+++++.++-|++.+.|+..|+|-+||+.+|-....|   ..|.++|+.++....++.+++++.+|.+++||..+..
T Consensus       447 ~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~  526 (910)
T KOG1539|consen  447 DDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKV  526 (910)
T ss_pred             cCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcc
Confidence            3467899999999999999999999999999999988888   5899999999998888899999999999999998775


Q ss_pred             eEeeeCCCCCCCCCCC--------CCCCCC-----ccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        256 ECLVSNNDNDSDLDES--------KEPDES-----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~--------~~~~~~-----~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      .........+......        ....+.     .....+.+..+.||++.|+.++|||||++|++++.|++|++||+.
T Consensus       527 l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlp  606 (910)
T KOG1539|consen  527 LKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLP  606 (910)
T ss_pred             eeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEecc
Confidence            3332222211111110        000111     122334667788999999999999999999999999999999999


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ++.++-.+. -..+.+++.|+|+|.++||+-
T Consensus       607 t~~lID~~~-vd~~~~sls~SPngD~LAT~H  636 (910)
T KOG1539|consen  607 TGTLIDGLL-VDSPCTSLSFSPNGDFLATVH  636 (910)
T ss_pred             CcceeeeEe-cCCcceeeEECCCCCEEEEEE
Confidence            999998886 467899999999999999875

>KOG0306|consensus

Probab=99.76  E-value=1.4e-17  Score=154.87  Aligned_cols=150  Identities=18%  Similarity=0.270  Sum_probs=135.7

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      -...|+|+.-+|+..+||.|.+||.|+||+..++.....+.||...|+++.|...|..|++||.|+.|.+||+-..    
T Consensus        64 ~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E----  139 (888)
T KOG0306|consen   64 KKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGE----  139 (888)
T ss_pred             ccceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccc----
Confidence            3468999999999999999999999999999999999999999999999999999999999999999999998643    


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceE
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR  338 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~  338 (360)
                                              .-+..+.||...|+.+-|..+.+++++.|.|+.|++||+.+..|..+.-.|.+.++
T Consensus       140 ------------------------~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw  195 (888)
T KOG0306|consen  140 ------------------------EGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIW  195 (888)
T ss_pred             ------------------------eeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEE
Confidence                                    23677899999999999998788999999999999999999999999999999999


Q ss_pred             EEEEcCCCCEEEcccccch
Q psy11015        339 AAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       339 ~~~~~~~g~~las~~~~~i  357 (360)
                      ++++++ ...++++.++.+
T Consensus       196 ~l~~~~-~~lvt~~~dse~  213 (888)
T KOG0306|consen  196 ALVLDE-KLLVTAGTDSEL  213 (888)
T ss_pred             EEEEec-ceEEEEecCCce
Confidence            999998 556666666554

>KOG0641|consensus

Probab=99.76  E-value=1.2e-16  Score=129.24  Aligned_cols=164  Identities=18%  Similarity=0.245  Sum_probs=136.8

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEE-ECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC--C-----CcCeEEEEEeeC
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVA-VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--H-----SGSVNSVRFLPN  233 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~-~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~--h-----~~~v~~i~~~p~  233 (360)
                      ++..+...++..+.+.||++-|.++- |+  +-.+++|+.|.+||+||++-..++.++..  |     .+.|.+++..|.
T Consensus       165 iy~tdc~~g~~~~a~sghtghilalyswn--~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdps  242 (350)
T KOG0641|consen  165 IYITDCGRGQGFHALSGHTGHILALYSWN--GAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPS  242 (350)
T ss_pred             EEEeecCCCCcceeecCCcccEEEEEEec--CcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCC
Confidence            34455578888999999999999884 76  66999999999999999998888887642  2     256999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  313 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d  313 (360)
                      |+++++|-.|....+||++.+                            ++++.+..|+..|.++.|+|...|++|++.|
T Consensus       243 grll~sg~~dssc~lydirg~----------------------------r~iq~f~phsadir~vrfsp~a~yllt~syd  294 (350)
T KOG0641|consen  243 GRLLASGHADSSCMLYDIRGG----------------------------RMIQRFHPHSADIRCVRFSPGAHYLLTCSYD  294 (350)
T ss_pred             cceeeeccCCCceEEEEeeCC----------------------------ceeeeeCCCccceeEEEeCCCceEEEEeccc
Confidence            999999999999999999877                            5688899999999999999999999999999


Q ss_pred             CcEEEEECCCC----eEEEEEecCCCceEEEEEcCCCC-EEEccccc
Q psy11015        314 RVANLFDVETG----TILQSLTEPGEAIRAAAGRTGGP-IRASPLLL  355 (360)
Q Consensus       314 g~i~iwd~~~~----~~~~~l~~h~~~v~~~~~~~~g~-~las~~~~  355 (360)
                      ..|++-|+...    -++.....|...+-.+.|+|... ++.+++|.
T Consensus       295 ~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadk  341 (350)
T KOG0641|consen  295 MKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADK  341 (350)
T ss_pred             ceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcc
Confidence            99999998621    12344557888888899999775 44555453

>KOG0293|consensus

Probab=99.76  E-value=3e-17  Score=143.26  Aligned_cols=85  Identities=22%  Similarity=0.334  Sum_probs=77.7

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ...+.+++.||..+|..+.|+||.++|++|+.|..+++||+.+|.+...+. +|.-.+.+++|.|||..+++|+.|+++.
T Consensus       258 ~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~  337 (519)
T KOG0293|consen  258 HFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTII  337 (519)
T ss_pred             ceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEE
Confidence            367889999999999999999999999999999999999999999888886 3457899999999999999999999999


Q ss_pred             EEEccc
Q psy11015        248 IWQAVI  253 (360)
Q Consensus       248 vwd~~~  253 (360)
                      .||+..
T Consensus       338 ~wdlDg  343 (519)
T KOG0293|consen  338 MWDLDG  343 (519)
T ss_pred             EecCCc
Confidence            998753

>KOG1446|consensus

Probab=99.76  E-value=7.8e-17  Score=136.43  Aligned_cols=153  Identities=19%  Similarity=0.210  Sum_probs=132.8

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC--CCcEEEEE
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG--DKSVHIWQ  250 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~--d~~i~vwd  250 (360)
                      .+.|..-.+.|.++.|+++|..+++++.|.++++||..+++.++++..+...+..++|-.....++.++.  |.+|+..+
T Consensus         7 ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLs   86 (311)
T KOG1446|consen    7 AKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLS   86 (311)
T ss_pred             ccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEE
Confidence            3445556778999999999999999999999999999999999999988888999999766666666666  88999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  330 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l  330 (360)
                      +.++                            +.+.-+.||...|++++.+|-++.+++++.|++|++||++..++...+
T Consensus        87 l~dN----------------------------kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l  138 (311)
T KOG1446|consen   87 LHDN----------------------------KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL  138 (311)
T ss_pred             eecC----------------------------ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE
Confidence            8876                            457889999999999999999999999999999999999988887777


Q ss_pred             ecCCCceEEEEEcCCCCEEEccccc
Q psy11015        331 TEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      .....  ..+||+|.|.++|.+...
T Consensus       139 ~~~~~--pi~AfDp~GLifA~~~~~  161 (311)
T KOG1446|consen  139 NLSGR--PIAAFDPEGLIFALANGS  161 (311)
T ss_pred             ecCCC--cceeECCCCcEEEEecCC
Confidence            65444  447899999999998865

>KOG0269|consensus

Probab=99.75  E-value=4.9e-18  Score=158.45  Aligned_cols=143  Identities=15%  Similarity=0.220  Sum_probs=122.8

Q ss_pred             EEEEEECC-CCCEEEEEeCCCcEEEEECCC---CeEEEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        183 VWDVAVRP-GQPVLGSASADRTVRLWSTQT---GKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       183 V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~---~~~~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      +..|.|+. +.++|||++..|.|.+||+..   .+.+..|..|...+++++|++. ..+|++||.||+|++||++..   
T Consensus        90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~---  166 (839)
T KOG0269|consen   90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSK---  166 (839)
T ss_pred             hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecc---
Confidence            34556764 456999999999999999986   4566788899999999999985 568999999999999999865   


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCC-CeEEEEEecCCC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVET-GTILQSLTEPGE  335 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~-~~~~~~l~~h~~  335 (360)
                                               ....++.+.+..|+.++|+| .+.+|+++...|.+++||++. .++...+.+|.+
T Consensus       167 -------------------------~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~G  221 (839)
T KOG0269|consen  167 -------------------------KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNG  221 (839)
T ss_pred             -------------------------cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccC
Confidence                                     33556667788999999999 467899999999999999985 456778889999


Q ss_pred             ceEEEEEcCCCCEEEccc
Q psy11015        336 AIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~~  353 (360)
                      +|.++.|+|++.+|||++
T Consensus       222 pV~c~nwhPnr~~lATGG  239 (839)
T KOG0269|consen  222 PVLCLNWHPNREWLATGG  239 (839)
T ss_pred             ceEEEeecCCCceeeecC
Confidence            999999999999999998

>KOG0268|consensus

Probab=99.74  E-value=1.1e-17  Score=143.71  Aligned_cols=216  Identities=17%  Similarity=0.192  Sum_probs=149.5

Q ss_pred             ccccccccCCCcccceeeeeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy11015        132 NKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT  211 (360)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~  211 (360)
                      +-...+.+.|..+..-    +.|+..+.+..|  +.....++.+|.+|.|.|..+++..  ..++|+|.|++|+.|-+..
T Consensus        67 dGV~~lakhp~~ls~~----aSGs~DG~VkiW--nlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~  138 (433)
T KOG0268|consen   67 DGVSCLAKHPNKLSTV----ASGSCDGEVKIW--NLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG  138 (433)
T ss_pred             cccchhhcCcchhhhh----hccccCceEEEE--ehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC
Confidence            3344444555544333    344445555444  4566778899999999999999987  6899999999999997432


Q ss_pred             C---------------------------e-----------EEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEEcc
Q psy11015        212 G---------------------------K-----------CVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       212 ~---------------------------~-----------~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~  252 (360)
                      .                           +           ++..+.-....|.++.|+|.. ..|++|+.|+.|.+||++
T Consensus       139 ~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R  218 (433)
T KOG0268|consen  139 PPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLR  218 (433)
T ss_pred             CcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecc
Confidence            1                           1           122222233567889999865 467778899999999999


Q ss_pred             cCeeEeeeCCCCCCCCCCCCC--------CCCCc------cccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEE
Q psy11015        253 INWECLVSNNDNDSDLDESKE--------PDESS------ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANL  318 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~------~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~i  318 (360)
                      ++..+.......-.....+.+        .++..      ....+|+....+|.+.|..++|+|.|+-+++||.|.+|+|
T Consensus       219 ~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRI  298 (433)
T KOG0268|consen  219 QASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRI  298 (433)
T ss_pred             cCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEE
Confidence            886655433332222221111        11111      2234578888899999999999999999999999999999


Q ss_pred             EECCCCeEEEEEec-CCCceEEEEEcCCCCEEEccccc
Q psy11015        319 FDVETGTILQSLTE-PGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       319 wd~~~~~~~~~l~~-h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      |.++.+..-..... -=..|.++.|+-|.+++++|+|.
T Consensus       299 f~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd  336 (433)
T KOG0268|consen  299 FPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDD  336 (433)
T ss_pred             eecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCC
Confidence            99987754322211 12479999999999999999964

>KOG2055|consensus

Probab=99.74  E-value=1.2e-16  Score=141.39  Aligned_cols=284  Identities=13%  Similarity=0.105  Sum_probs=176.7

Q ss_pred             ccccccccchhhhhhhccccCCcccCChhhHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcccccccccccCCCCC
Q psy11015         40 KLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECN  119 (360)
Q Consensus        40 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~~~~~~~~~~~~~~~  119 (360)
                      .+|.+.|+|-             .+.+--+..|++.+....++..-.-..+..+|+++++....+|.|+......-.  .
T Consensus       103 aaW~DedDe~-------------l~V~~~~~nr~rk~r~~e~e~~~~~~~Y~~RLr~~F~k~~~~PkWA~~~~~~~~--~  167 (514)
T KOG2055|consen  103 AAWEDEDDED-------------LVVADKMTNRLRKLRTTENEGLLSGKEYKGRLREQFQKRYPVPKWAKKASGKDS--E  167 (514)
T ss_pred             ccccCCcccc-------------cchhhhhhhhhhhccccccccccchHHHHHHHHHHHHHhcCCCccccccccccc--c
Confidence            5788888762             222223446777777774444444567788899999999999988776553100  0


Q ss_pred             CcchhhccccCcccccccccCCCcccceeeeeeeecCCeEEEeeecCccceeeeeeeec---CCCCEEEEEECCCCCEEE
Q psy11015        120 DMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG---HRDGVWDVAVRPGQPVLG  196 (360)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---h~~~V~~l~~~~~~~~l~  196 (360)
                      +.+-....               ....+....|..+.+..   +.........++.++.   -.++|++|.|+|..++++
T Consensus       168 DDe~e~s~---------------d~lL~tt~~yi~s~s~~---Lp~~tl~~krlkDaNa~~ps~~~I~sv~FHp~~plll  229 (514)
T KOG2055|consen  168 DDEEEGSL---------------DDLLKTTVGYIDSRSKL---LPPGTLNIKRLKDANAAHPSHGGITSVQFHPTAPLLL  229 (514)
T ss_pred             cccccccH---------------HHHHHhhhccccccccc---CCCceeeeEeecccccCCcCcCCceEEEecCCCceEE
Confidence            00000000               00000000000011111   1111112222222222   257899999999999999


Q ss_pred             EEeCCCcEEEEECCC--CeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCC---CCCC
Q psy11015        197 SASADRTVRLWSTQT--GKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDS---DLDE  270 (360)
Q Consensus       197 sgs~Dg~v~iwd~~~--~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~---~~~~  270 (360)
                      +|+.||+++||.++.  ...++.+.--..+|.+.+|+|+|. .+++++.......||+.+.............   ....
T Consensus       230 vaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~F  309 (514)
T KOG2055|consen  230 VAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERF  309 (514)
T ss_pred             EecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhhee
Confidence            999999999999863  346667666677899999999998 8999999999999999876433221111110   0000


Q ss_pred             CCCCCCCc--------------cccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCC-
Q psy11015        271 SKEPDESS--------------ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE-  335 (360)
Q Consensus       271 ~~~~~~~~--------------~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~-  335 (360)
                      ..++....              ......+.++. -.+.|..++|+.+|+.|+..+.+|.|.+||++...+++.+...++ 
T Consensus       310 eVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v  388 (514)
T KOG2055|consen  310 EVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSV  388 (514)
T ss_pred             EecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCcc
Confidence            01111110              01111122221 256789999999999999999999999999999999998864322 


Q ss_pred             ceEEEEEcCCCCEEEcccccch
Q psy11015        336 AIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~~~~~i  357 (360)
                      .-++++.+++|.++|+|++.+|
T Consensus       389 ~gts~~~S~ng~ylA~GS~~Gi  410 (514)
T KOG2055|consen  389 HGTSLCISLNGSYLATGSDSGI  410 (514)
T ss_pred             ceeeeeecCCCceEEeccCcce
Confidence            3367888899999999999876

>KOG1332|consensus

Probab=99.74  E-value=1.5e-17  Score=135.94  Aligned_cols=144  Identities=22%  Similarity=0.255  Sum_probs=122.8

Q ss_pred             eecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEEEeCCCcCeEEEEEee--CCCEEEEEeCCCcEEEEE
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~~i~vwd  250 (360)
                      -.+|.+.|.++...-.|..|+|+|.|++|+|+.++..   ..+.++.||.++|+.++|..  .|.+|++++.||.|.||.
T Consensus         7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk   86 (299)
T KOG1332|consen    7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK   86 (299)
T ss_pred             hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence            3579999999888888999999999999999999754   57889999999999999964  689999999999999998


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCC-eE-
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETG-TI-  326 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~-~~-  326 (360)
                      -..+                          .++.......|...|++++|.|.  |-.|++++.||.|.|.+++.. .. 
T Consensus        87 e~~g--------------------------~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~  140 (299)
T KOG1332|consen   87 EENG--------------------------RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWT  140 (299)
T ss_pred             cCCC--------------------------chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCcc
Confidence            7655                          34567777889999999999985  567899999999999988754 22 


Q ss_pred             -EEEEecCCCceEEEEEcCC
Q psy11015        327 -LQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       327 -~~~l~~h~~~v~~~~~~~~  345 (360)
                       -.....|.-.|+++.|.|.
T Consensus       141 t~ki~~aH~~GvnsVswapa  160 (299)
T KOG1332|consen  141 TSKIVFAHEIGVNSVSWAPA  160 (299)
T ss_pred             chhhhhccccccceeeecCc
Confidence             2344679999999999987

>KOG0270|consensus

Probab=99.73  E-value=2.8e-17  Score=144.65  Aligned_cols=148  Identities=24%  Similarity=0.318  Sum_probs=122.7

Q ss_pred             ecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccC
Q psy11015        177 SGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      .+|++.|.+|+|+..- +.|||||.|.+|++||+.+|+|..++..|.+.|.++.|+|. +..+++||.|++|.+.|.+..
T Consensus       240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~  319 (463)
T KOG0270|consen  240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDP  319 (463)
T ss_pred             ccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCc
Confidence            4799999999998754 49999999999999999999999999999999999999985 578999999999999998742


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEECCCcEEEEECCCC-eEEEEEec
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETG-TILQSLTE  332 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~dg~i~iwd~~~~-~~~~~l~~  332 (360)
                      ..                            ....-...+.|..++|.|... .++++..||+|+-+|+|.. +++.++.+
T Consensus       320 ~~----------------------------s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~A  371 (463)
T KOG0270|consen  320 SN----------------------------SGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKA  371 (463)
T ss_pred             cc----------------------------cCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEe
Confidence            11                            011112346789999998654 5788889999999999964 89999999


Q ss_pred             CCCceEEEEEcCCCC-EEEcc
Q psy11015        333 PGEAIRAAAGRTGGP-IRASP  352 (360)
Q Consensus       333 h~~~v~~~~~~~~g~-~las~  352 (360)
                      |.++|.++++++.-+ +++|+
T Consensus       372 Hd~~ISgl~~n~~~p~~l~t~  392 (463)
T KOG0270|consen  372 HDDEISGLSVNIQTPGLLSTA  392 (463)
T ss_pred             ccCCcceEEecCCCCcceeec
Confidence            999999999987654 44443

>KOG0299|consensus

Probab=99.73  E-value=6.6e-17  Score=142.87  Aligned_cols=160  Identities=23%  Similarity=0.275  Sum_probs=138.9

Q ss_pred             ecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC
Q psy11015        164 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD  243 (360)
Q Consensus       164 ~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d  243 (360)
                      .|+..++..++.+.+|.+.|.+++|...-..++++|.|++|++|+++....+.++-||.+.|.+|.....++.+-+|+.|
T Consensus       228 Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrD  307 (479)
T KOG0299|consen  228 IWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRD  307 (479)
T ss_pred             EecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEecccc
Confidence            45567888899999999999999999887899999999999999999888888999999999999998888888888899


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      +++++|++...                             ....+.+|.+.+-|++|- +..++++||.||.|.+|++.+
T Consensus       308 rT~rlwKi~ee-----------------------------sqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~K  357 (479)
T KOG0299|consen  308 RTVRLWKIPEE-----------------------------SQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLK  357 (479)
T ss_pred             ceeEEEecccc-----------------------------ceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeecc
Confidence            99999998533                             244567889999999998 567899999999999999998


Q ss_pred             CeEEEEEec-C-----------CCceEEEEEcCCCCEEEccc
Q psy11015        324 GTILQSLTE-P-----------GEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       324 ~~~~~~l~~-h-----------~~~v~~~~~~~~g~~las~~  353 (360)
                      .+++.+... |           ...|++++..|+..++||++
T Consensus       358 Kkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS  399 (479)
T KOG0299|consen  358 KKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGS  399 (479)
T ss_pred             cCceeEeeccccccCCccccccccceeeeEecccCceEEecC
Confidence            888776542 2           12789999999999999988

>KOG1009|consensus

Probab=99.72  E-value=5.3e-17  Score=141.46  Aligned_cols=162  Identities=22%  Similarity=0.364  Sum_probs=132.3

Q ss_pred             CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC---------eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG---------KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~---------~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      ..+|..+.|.+... .++||+.|..|++|-+..+         ..+..+..|...|+++.|+|+|.++++|+.+|.+.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            35899999998766 9999999999999988643         2345667899999999999999999999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  329 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~  329 (360)
                      ....-.           +. .......-....|.....+.+|...|..++|+|++.++++|+.|..+++||+..|+.+..
T Consensus        93 k~~~~~-----------~~-~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~  160 (434)
T KOG1009|consen   93 KQGDVR-----------IF-DADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAI  160 (434)
T ss_pred             EecCcC-----------Cc-cccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEee
Confidence            754210           00 000011111233556777889999999999999999999999999999999999999999


Q ss_pred             EecCCCceEEEEEcCCCCEEEccc
Q psy11015        330 LTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       330 l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +..|..-|..++|.|-++++++=+
T Consensus       161 ~~dh~~yvqgvawDpl~qyv~s~s  184 (434)
T KOG1009|consen  161 LDDHEHYVQGVAWDPLNQYVASKS  184 (434)
T ss_pred             ccccccccceeecchhhhhhhhhc
Confidence            999999999999999999888643

>KOG0642|consensus

Probab=99.72  E-value=1.9e-16  Score=143.27  Aligned_cols=190  Identities=21%  Similarity=0.243  Sum_probs=140.8

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC----------eEEEEEeCCCcCeEEEEEeeCCCEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----------KCVLQYSGHSGSVNSVRFLPNKDLV  237 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~----------~~~~~~~~h~~~v~~i~~~p~~~~l  237 (360)
                      ....++.+|++|.++|.|+++.+.+..+++||-||+|+.|++...          .....+.||.+.|+.+++|+....|
T Consensus       332 ~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~L  411 (577)
T KOG0642|consen  332 KDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRL  411 (577)
T ss_pred             cceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccce
Confidence            456789999999999999999999999999999999999976421          3456788999999999999999999


Q ss_pred             EEEeCCCcEEEEEcccCeeEeeeCCC-CCCCCCCCCCC----------C--CC---ccccccceeEeeC-------CCCc
Q psy11015        238 LSASGDKSVHIWQAVINWECLVSNND-NDSDLDESKEP----------D--ES---SITLRTPVKELLG-------HSNV  294 (360)
Q Consensus       238 ~s~s~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~----------~--~~---~~~~~~~~~~~~~-------h~~~  294 (360)
                      ++++.||++++|+......+...... ...+.......          .  ..   .......+..+..       ....
T Consensus       412 lscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~  491 (577)
T KOG0642|consen  412 LSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQ  491 (577)
T ss_pred             eeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCc
Confidence            99999999999987655431110000 00000000000          0  00   0111111111111       1134


Q ss_pred             EEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        295 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       295 v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      +.-+.++|.+...+++..|+.|+++|..++..++....|...++++++.|+|.++++++ |+.+
T Consensus       492 in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv  555 (577)
T KOG0642|consen  492 INKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSV  555 (577)
T ss_pred             cceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCcee
Confidence            67788999999999999999999999999999999999999999999999999999887 4443

>KOG4328|consensus

Probab=99.72  E-value=6.5e-17  Score=142.82  Aligned_cols=194  Identities=20%  Similarity=0.183  Sum_probs=138.2

Q ss_pred             cCccceeeeeeeecCCCCEEEEEECCCCC--EEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCeEEEEEeeC-CCEE
Q psy11015        165 TSLLSCYKIRSFSGHRDGVWDVAVRPGQP--VLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLPN-KDLV  237 (360)
Q Consensus       165 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~--~l~sgs~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i~~~p~-~~~l  237 (360)
                      ....+......++-|.++|++++|+|..+  .+++|...|+|-+||+.+.    ..+..+..|.++|.++.|+|. ...+
T Consensus       171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i  250 (498)
T KOG4328|consen  171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQI  250 (498)
T ss_pred             cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhhe
Confidence            34455556667778999999999999765  8999999999999999532    346677889999999999994 4689


Q ss_pred             EEEeCCCcEEEEEcccCeeEeeeCCCCC----CCCCCCC------CC-CCC-----cc-ccccceeEeeCCCCcEEEEEE
Q psy11015        238 LSASGDKSVHIWQAVINWECLVSNNDND----SDLDESK------EP-DES-----SI-TLRTPVKELLGHSNVVIAADW  300 (360)
Q Consensus       238 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~----~~~~~~~------~~-~~~-----~~-~~~~~~~~~~~h~~~v~~i~~  300 (360)
                      ++.|.||+|++-|+.++.....+.....    +......      .. ..+     .. ..+.....+.-|...|.++++
T Consensus       251 ~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~  330 (498)
T KOG4328|consen  251 YSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVAL  330 (498)
T ss_pred             eeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeec
Confidence            9999999999999987643222222100    0000000      00 000     00 111223344568889999999


Q ss_pred             cCCCC-EEEEEECCCcEEEEECCCCeE----EEEEecCCCceEEEEEcCC-CCEEEcccccchh
Q psy11015        301 LSDGE-QVITASWDRVANLFDVETGTI----LQSLTEPGEAIRAAAGRTG-GPIRASPLLLAIR  358 (360)
Q Consensus       301 sp~g~-~l~tgs~dg~i~iwd~~~~~~----~~~l~~h~~~v~~~~~~~~-g~~las~~~~~ir  358 (360)
                      +|... +|+|+|.|++++|||++....    +-..-.|..+|.++.|+|. |.++.|+.|..||
T Consensus       331 NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IR  394 (498)
T KOG4328|consen  331 NPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIR  394 (498)
T ss_pred             CCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceE
Confidence            99765 579999999999999985432    2223459999999999995 6788899999887

>KOG1274|consensus

Probab=99.71  E-value=3e-16  Score=149.21  Aligned_cols=151  Identities=17%  Similarity=0.222  Sum_probs=123.4

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC--------CcCeEEEEEeeCCCEEEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH--------SGSVNSVRFLPNKDLVLS  239 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h--------~~~v~~i~~~p~~~~l~s  239 (360)
                      ......+.++||.++|.++.|+|.+++||+.+.||.|+|||+.++.+..++.+-        ...+..++|+|+|..++.
T Consensus       126 ~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~  205 (933)
T KOG1274|consen  126 DDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAV  205 (933)
T ss_pred             cccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEe
Confidence            455667889999999999999999999999999999999999998877666532        345778999999888999


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEE
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVAN  317 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~  317 (360)
                      .+.|+.|++|+....                            .+...+.  .+...+..++|+|+|.|||+++.||.|-
T Consensus       206 ~~~d~~Vkvy~r~~w----------------------------e~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~  257 (933)
T KOG1274|consen  206 PPVDNTVKVYSRKGW----------------------------ELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQIL  257 (933)
T ss_pred             eccCCeEEEEccCCc----------------------------eeheeecccccccceEEEEEcCCCcEEeeeccCCcEE
Confidence            999999999987644                            2233332  3455599999999999999999999999


Q ss_pred             EEECCCCeEEEEEecCCCceEEEEEcCCCCEEE
Q psy11015        318 LFDVETGTILQSLTEPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       318 iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~la  350 (360)
                      |||+.+...    ......|++++|.|+++-+.
T Consensus       258 vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it  286 (933)
T KOG1274|consen  258 VWNVDTHER----HEFKRAVCCEAWKPNANAIT  286 (933)
T ss_pred             EEecccchh----ccccceeEEEecCCCCCeeE
Confidence            999998322    33456899999999887543

>KOG2445|consensus

Probab=99.70  E-value=4.5e-15  Score=125.33  Aligned_cols=204  Identities=20%  Similarity=0.237  Sum_probs=143.9

Q ss_pred             ecCCeEEEeee--cCccceeeeeeeecCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECC---------CCeEEEEEeC
Q psy11015        154 VQTSKIVSSFK--TSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQ---------TGKCVLQYSG  220 (360)
Q Consensus       154 ~~~~~~~~~~~--~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~---------~~~~~~~~~~  220 (360)
                      ++.+..+.+|.  .+..+..+....+.|.+.|+.+.|-+  -|+.+|++|.|+++.||.-.         ......++..
T Consensus        31 CSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~D  110 (361)
T KOG2445|consen   31 CSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVD  110 (361)
T ss_pred             ccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeec
Confidence            34444555666  34577889999999999999999855  47899999999999999862         1235567777


Q ss_pred             CCcCeEEEEEeeC--CCEEEEEeCCCcEEEEEcccCeeEee------eC---CC---CC----------CCCC---CCCC
Q psy11015        221 HSGSVNSVRFLPN--KDLVLSASGDKSVHIWQAVINWECLV------SN---ND---ND----------SDLD---ESKE  273 (360)
Q Consensus       221 h~~~v~~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~------~~---~~---~~----------~~~~---~~~~  273 (360)
                      ..+.|++|+|.|.  |-.+++++.||++|||+.........      +.   .+   ..          +...   ....
T Consensus       111 srssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvg  190 (361)
T KOG2445|consen  111 SRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVG  190 (361)
T ss_pred             CCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEE
Confidence            8899999999994  66899999999999998754321110      00   00   00          0000   0000


Q ss_pred             CCC-----C---------ccccccceeEeeCCCCcEEEEEEcCC----CCEEEEEECCCcEEEEECCCC-----------
Q psy11015        274 PDE-----S---------SITLRTPVKELLGHSNVVIAADWLSD----GEQVITASWDRVANLFDVETG-----------  324 (360)
Q Consensus       274 ~~~-----~---------~~~~~~~~~~~~~h~~~v~~i~~sp~----g~~l~tgs~dg~i~iwd~~~~-----------  324 (360)
                      ...     .         ....+..+.++.+|..+|+.++|.|.    ...||+++.|| |+||.+...           
T Consensus       191 s~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~  269 (361)
T KOG2445|consen  191 SDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLA  269 (361)
T ss_pred             cccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccC
Confidence            000     0         01123356677799999999999995    35789999999 999998731           


Q ss_pred             ---------eEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        325 ---------TILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       325 ---------~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                               +.+..+..|.+.|+.+.|+-.|.+|+++. |+-+|
T Consensus       270 ~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VR  313 (361)
T KOG2445|consen  270 PDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVR  313 (361)
T ss_pred             CCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceee
Confidence                     23556778999999999999999988766 55565

>KOG0646|consensus

Probab=99.70  E-value=4.1e-16  Score=138.10  Aligned_cols=154  Identities=20%  Similarity=0.216  Sum_probs=131.6

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      .++|.|++-+|.|.+|+.|+..|.+++|.+.+|..+..+.+|-..|+|+.|+-||.+|+|||.||.|.+|.+..--....
T Consensus        81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~  160 (476)
T KOG0646|consen   81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADN  160 (476)
T ss_pred             ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccccc
Confidence            46899999999999999888999999999999999999999999999999999999999999999999998753211100


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC--CEEEEEECCCcEEEEECCCCeEEEEEecCCCce
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--EQVITASWDRVANLFDVETGTILQSLTEPGEAI  337 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g--~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v  337 (360)
                                         .....|.+.+..|.-+|+.+...+.|  .+++|+|.|.++++||+..|..+.++.- ..++
T Consensus       161 -------------------~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f-p~si  220 (476)
T KOG0646|consen  161 -------------------DHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF-PSSI  220 (476)
T ss_pred             -------------------CCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec-CCcc
Confidence                               01345789999999999999987654  5899999999999999999999988874 5679


Q ss_pred             EEEEEcCCCCEEEccc
Q psy11015        338 RAAAGRTGGPIRASPL  353 (360)
Q Consensus       338 ~~~~~~~~g~~las~~  353 (360)
                      .+++.+|.+..+..|+
T Consensus       221 ~av~lDpae~~~yiGt  236 (476)
T KOG0646|consen  221 KAVALDPAERVVYIGT  236 (476)
T ss_pred             eeEEEcccccEEEecC
Confidence            9999999887655443

>KOG1063|consensus

Probab=99.70  E-value=8.6e-17  Score=148.53  Aligned_cols=150  Identities=23%  Similarity=0.337  Sum_probs=127.0

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADR-----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg-----~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      ..++.+.||.-.|+|++.+|+++++||++...     .|++|+..+...+..+.+|+-.|+.++|+|||++|++.|.|++
T Consensus       516 PEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt  595 (764)
T KOG1063|consen  516 PEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRT  595 (764)
T ss_pred             hhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCce
Confidence            45677889999999999999999999998754     5899999999888899999999999999999999999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-  324 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-  324 (360)
                      +.+|....+....                        ........|+.-|+.+.|+|++.+++|+|.|.+|++|..... 
T Consensus       596 ~sl~~~~~~~~~e------------------------~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~  651 (764)
T KOG1063|consen  596 VSLYEVQEDIKDE------------------------FRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLR  651 (764)
T ss_pred             EEeeeeecccchh------------------------hhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCch
Confidence            9999875441110                        012336689999999999999999999999999999998877 


Q ss_pred             -eEEEE--EecCCCceEEEEEcC
Q psy11015        325 -TILQS--LTEPGEAIRAAAGRT  344 (360)
Q Consensus       325 -~~~~~--l~~h~~~v~~~~~~~  344 (360)
                       +.+..  ...+..+|++++|.|
T Consensus       652 d~~i~~~a~~~~~~aVTAv~~~~  674 (764)
T KOG1063|consen  652 DKYISRFACLKFSLAVTAVAYLP  674 (764)
T ss_pred             hhhhhhhchhccCCceeeEEeec
Confidence             44433  235788999999976

>KOG0771|consensus

Probab=99.69  E-value=2.9e-16  Score=137.66  Aligned_cols=167  Identities=16%  Similarity=0.197  Sum_probs=124.7

Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCC
Q psy11015        184 WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNND  263 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~  263 (360)
                      .+++|+++|..+++|+.||++|||+..+...+.....|.+.|.++.|+|||.+|++-+.| ..+||+++++.........
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            788999999999999999999999988888888888899999999999999999999999 8999999988332221100


Q ss_pred             CCCC----CCCCCCC------------CCC-----cccccc-----ceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEE
Q psy11015        264 NDSD----LDESKEP------------DES-----SITLRT-----PVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  317 (360)
Q Consensus       264 ~~~~----~~~~~~~------------~~~-----~~~~~~-----~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~  317 (360)
                      ....    .......            ...     ....|.     +..........|++++.+++|++++.|+.||.|-
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa  306 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA  306 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence            0000    0000000            000     000000     1111111234799999999999999999999999


Q ss_pred             EEECCCCeEEEEEe-cCCCceEEEEEcCCCCEEEc
Q psy11015        318 LFDVETGTILQSLT-EPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       318 iwd~~~~~~~~~l~-~h~~~v~~~~~~~~g~~las  351 (360)
                      |++..+.+.++-.+ .|...|+.+.|+|+.+++++
T Consensus       307 i~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~s  341 (398)
T KOG0771|consen  307 IYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLAS  341 (398)
T ss_pred             EEEeceeeeeEeehhhheeeeeeEEEcCCcCcccc
Confidence            99999999887764 59999999999999988775

>KOG1274|consensus

Probab=99.69  E-value=1.9e-15  Score=143.78  Aligned_cols=181  Identities=16%  Similarity=0.179  Sum_probs=139.7

Q ss_pred             eeecCCeEEEeeecCcccee-eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015        152 LKVQTSKIVSSFKTSLLSCY-KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~  230 (360)
                      +.+.....+..+..+..... .+..|   +-++.+++|+.+|..++.||.|-.|++-+..+......+.+|.++|.++.|
T Consensus        70 ~~~s~~~tv~~y~fps~~~~~iL~Rf---tlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~  146 (933)
T KOG1274|consen   70 LTGSEQNTVLRYKFPSGEEDTILARF---TLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSY  146 (933)
T ss_pred             EEeeccceEEEeeCCCCCccceeeee---eccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeE
Confidence            33444445555555443222 34333   458999999999999999999999999999999999999999999999999


Q ss_pred             eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE
Q psy11015        231 LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  310 (360)
Q Consensus       231 ~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg  310 (360)
                      +|.+.+||+.+.||+|++||+..+........-                   .+...+ .....+..++|+|+|..++..
T Consensus       147 ~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v-------------------~k~n~~-~~s~i~~~~aW~Pk~g~la~~  206 (933)
T KOG1274|consen  147 DPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGV-------------------DKDNEF-ILSRICTRLAWHPKGGTLAVP  206 (933)
T ss_pred             cCCCCEEEEEecCceEEEEEcccchhhhhcccC-------------------Cccccc-cccceeeeeeecCCCCeEEee
Confidence            999999999999999999999876332211000                   000011 114567789999999999999


Q ss_pred             ECCCcEEEEECCCCeEEEEEec--CCCceEEEEEcCCCCEEEccccc
Q psy11015        311 SWDRVANLFDVETGTILQSLTE--PGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       311 s~dg~i~iwd~~~~~~~~~l~~--h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      +.|+.|++|+..++.....+..  +...+.++.|+|+|.|+|++...
T Consensus       207 ~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~  253 (933)
T KOG1274|consen  207 PVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLD  253 (933)
T ss_pred             ccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccC
Confidence            9999999999999888777754  44459999999999999988743

>KOG1034|consensus

Probab=99.67  E-value=2.4e-15  Score=127.94  Aligned_cols=188  Identities=20%  Similarity=0.232  Sum_probs=129.7

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEE---eCCCcCeEEEEEeeCCCEEEEEeC
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSVRFLPNKDLVLSASG  242 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~---~~h~~~v~~i~~~p~~~~l~s~s~  242 (360)
                      ..++++...+.||.+.|+.+.++|+. +++++||.|.+||+||+++..|+..|   .||.+.|.++.|+++|.+|++|+.
T Consensus       122 ~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGm  201 (385)
T KOG1034|consen  122 VVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGM  201 (385)
T ss_pred             cchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCC
Confidence            35677888999999999999999976 49999999999999999999999887   579999999999999999999999


Q ss_pred             CCcEEEEEcccCeeEeeeCCC--CCCCCC----------CCCC--C---------------------CCCcccccc----
Q psy11015        243 DKSVHIWQAVINWECLVSNND--NDSDLD----------ESKE--P---------------------DESSITLRT----  283 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~--~~~~~~----------~~~~--~---------------------~~~~~~~~~----  283 (360)
                      |.++++|++....-...+...  ..+...          .+..  .                     ....+..|.    
T Consensus       202 Dhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl  281 (385)
T KOG1034|consen  202 DHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKL  281 (385)
T ss_pred             cceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchh
Confidence            999999999833110000000  000000          0000  0                     000000111    


Q ss_pred             ---------------ceeEeeCCCCcEEEEE--EcCCCCEEEEEECCCcEEEEECCCCeEE--EEEec--CCCceEEEEE
Q psy11015        284 ---------------PVKELLGHSNVVIAAD--WLSDGEQVITASWDRVANLFDVETGTIL--QSLTE--PGEAIRAAAG  342 (360)
Q Consensus       284 ---------------~~~~~~~h~~~v~~i~--~sp~g~~l~tgs~dg~i~iwd~~~~~~~--~~l~~--h~~~v~~~~~  342 (360)
                                     .+..+.-....|+-+.  |.|-++.||.|...|.+.+||++...+.  .++..  ....|...+|
T Consensus       282 ~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sf  361 (385)
T KOG1034|consen  282 EESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSF  361 (385)
T ss_pred             hhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeee
Confidence                           1122222233444444  4566889999999999999999876652  23332  2557899999


Q ss_pred             cCCCCEEEcccc
Q psy11015        343 RTGGPIRASPLL  354 (360)
Q Consensus       343 ~~~g~~las~~~  354 (360)
                      +-+|.+++.-.+
T Consensus       362 S~dgs~lv~vcd  373 (385)
T KOG1034|consen  362 SRDGSILVLVCD  373 (385)
T ss_pred             cccCcEEEEEeC
Confidence            999998775544

>KOG1063|consensus

Probab=99.65  E-value=4.6e-15  Score=137.27  Aligned_cols=185  Identities=22%  Similarity=0.249  Sum_probs=139.5

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCC---EEEEEeCCCcEEEEECCCCe----------------
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQP---VLGSASADRTVRLWSTQTGK----------------  213 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~---~l~sgs~Dg~v~iwd~~~~~----------------  213 (360)
                      .|.....+-.+......+..+.++.||++.|.+++|...+.   +|+|+|.|..||||.+.-+.                
T Consensus       164 ~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~  243 (764)
T KOG1063|consen  164 CGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSN  243 (764)
T ss_pred             ecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccC
Confidence            44555555556666678899999999999999999976543   89999999999999874221                


Q ss_pred             -----EEEE----------EeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCc
Q psy11015        214 -----CVLQ----------YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESS  278 (360)
Q Consensus       214 -----~~~~----------~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (360)
                           +...          +.||...|+++.|+|.+..|+++|.|.++.+|......-...                   
T Consensus       244 ~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv-------------------  304 (764)
T KOG1063|consen  244 LPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWV-------------------  304 (764)
T ss_pred             CceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEE-------------------
Confidence                 1111          349999999999999999999999999999998765411110                   


Q ss_pred             cccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC-C--eEEEEEecCCCceEEEEEcCCCCEEEccc-c
Q psy11015        279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET-G--TILQSLTEPGEAIRAAAGRTGGPIRASPL-L  354 (360)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~-~--~~~~~l~~h~~~v~~~~~~~~g~~las~~-~  354 (360)
                        ..-.+..+.|......+.-|+|+++.+++-+..|-.++|.... .  .....+.+|-..|++++|+|.|.++.|.+ |
T Consensus       305 --~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~D  382 (764)
T KOG1063|consen  305 --DVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLD  382 (764)
T ss_pred             --EEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccc
Confidence              0002233334556789999999999999999999999998322 2  23445678999999999999998766554 7


Q ss_pred             cchh
Q psy11015        355 LAIR  358 (360)
Q Consensus       355 ~~ir  358 (360)
                      ++.|
T Consensus       383 QTTR  386 (764)
T KOG1063|consen  383 QTTR  386 (764)
T ss_pred             ccee
Confidence            7665

>KOG1036|consensus

Probab=99.65  E-value=5.2e-15  Score=124.99  Aligned_cols=135  Identities=16%  Similarity=0.284  Sum_probs=116.2

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      -.+.|.+|.|+|.++.|+.++.||++++||+........+. |.+++.+++|.+ ...+++|+.||.|+.+|+.++    
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~----   85 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTG----   85 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCC----
Confidence            36789999999999999999999999999999887777777 999999999986 557899999999999999987    


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceE
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR  338 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~  338 (360)
                                               ....+..|..+|.++.+++....+++||||++|++||.+....+.++... ..|.
T Consensus        86 -------------------------~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~-kkVy  139 (323)
T KOG1036|consen   86 -------------------------NEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQG-KKVY  139 (323)
T ss_pred             -------------------------cceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccC-ceEE
Confidence                                     45556679999999999998889999999999999999986666666543 4788


Q ss_pred             EEEEcCC
Q psy11015        339 AAAGRTG  345 (360)
Q Consensus       339 ~~~~~~~  345 (360)
                      ++....+
T Consensus       140 ~~~v~g~  146 (323)
T KOG1036|consen  140 CMDVSGN  146 (323)
T ss_pred             EEeccCC
Confidence            8776533

>KOG2445|consensus

Probab=99.64  E-value=9.4e-15  Score=123.40  Aligned_cols=160  Identities=20%  Similarity=0.301  Sum_probs=124.8

Q ss_pred             ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC----CeEEEEEeCCCcCeEEEEEee--CCCEEEEEeCCCcEEEEE
Q psy11015        177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT----GKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~----~~~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~~i~vwd  250 (360)
                      .+|.+-|.++.|++.|+.++||+.|++|+|||...    ..+...++.|.+.|..|.|.+  -|+.++++|.|+++.||.
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            47999999999999999999999999999999653    368888999999999999964  489999999999999996


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCC-----
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVET-----  323 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~-----  323 (360)
                      =....                   .......|....++....+.|+.++|.|.  |-.+|+++.||.+|||+...     
T Consensus        90 E~~~~-------------------~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs  150 (361)
T KOG2445|consen   90 EQEKS-------------------EEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLS  150 (361)
T ss_pred             ecccc-------------------cccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccc
Confidence            32110                   00011234456777777889999999994  67899999999999998653     


Q ss_pred             -CeEEEEEe-------cCCCceEEEEEcCC---CCEEEccccc
Q psy11015        324 -GTILQSLT-------EPGEAIRAAAGRTG---GPIRASPLLL  355 (360)
Q Consensus       324 -~~~~~~l~-------~h~~~v~~~~~~~~---g~~las~~~~  355 (360)
                       ....+++.       .+..+..|+.|+|.   .+++|-|.+.
T Consensus       151 ~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e  193 (361)
T KOG2445|consen  151 QWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDE  193 (361)
T ss_pred             cchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEccc
Confidence             22233333       45678889999875   4677777765

>KOG0321|consensus

Probab=99.63  E-value=2.9e-15  Score=137.38  Aligned_cols=203  Identities=21%  Similarity=0.288  Sum_probs=129.6

Q ss_pred             ecCCeEEEeeecCcccee----eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEE--EeCCCcCeEE
Q psy11015        154 VQTSKIVSSFKTSLLSCY----KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--YSGHSGSVNS  227 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~----~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~--~~~h~~~v~~  227 (360)
                      +...+.+..|+......+    .++....|.+.|..+.|-|....|++++.|.++++||+.+++++..  +.||.+.|.+
T Consensus        70 adE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS  149 (720)
T KOG0321|consen   70 ADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKS  149 (720)
T ss_pred             ecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccch
Confidence            444445555655543333    3455678999999999999666999999999999999999988877  8999999999


Q ss_pred             EEEeeCC-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEE---EEEcCC
Q psy11015        228 VRFLPNK-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA---ADWLSD  303 (360)
Q Consensus       228 i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~---i~~sp~  303 (360)
                      ++|+|.. ..|++|+.||.|.|||++....-.............-..+ .........+..-..|...|.+   +-+..|
T Consensus       150 ~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~p-tpskp~~kr~~k~kA~s~ti~ssvTvv~fkD  228 (720)
T KOG0321|consen  150 ECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAP-TPSKPLKKRIRKWKAASNTIFSSVTVVLFKD  228 (720)
T ss_pred             hhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCC-CCCchhhccccccccccCceeeeeEEEEEec
Confidence            9999965 5789999999999999885531000000000000000000 0000001111222234444433   444558


Q ss_pred             CCEEEEEEC-CCcEEEEECCCCeEEEEE--------ecC---CCceEEEEEcCCCC-EEEcccccch
Q psy11015        304 GEQVITASW-DRVANLFDVETGTILQSL--------TEP---GEAIRAAAGRTGGP-IRASPLLLAI  357 (360)
Q Consensus       304 g~~l~tgs~-dg~i~iwd~~~~~~~~~l--------~~h---~~~v~~~~~~~~g~-~las~~~~~i  357 (360)
                      ...||++|. |+.|+|||++........        ..|   .-.++++.....|. ++|+..|+.|
T Consensus       229 e~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sI  295 (720)
T KOG0321|consen  229 ESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSI  295 (720)
T ss_pred             cceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcE
Confidence            889999887 999999999865443221        223   23567777776665 5667777654

>KOG0639|consensus

Probab=99.63  E-value=4.8e-16  Score=138.84  Aligned_cols=146  Identities=16%  Similarity=0.245  Sum_probs=124.5

Q ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015        181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      .-|.++...|+|+.|++|++-.++.|||+....+  ...+..-.-...+++.+||.+..+++..||.|.|||+...    
T Consensus       466 nyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq----  541 (705)
T KOG0639|consen  466 NYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQ----  541 (705)
T ss_pred             cceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccc----
Confidence            4577888999999999999999999999976543  3334433345778999999999999999999999999865    


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceE
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR  338 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~  338 (360)
                                              ..+..|.||...+.||.++++|..|-||+-|.+||-||++++..+.... ....|.
T Consensus       542 ------------------------~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIf  596 (705)
T KOG0639|consen  542 ------------------------TLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIF  596 (705)
T ss_pred             ------------------------eeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhhhe
Confidence                                    4678899999999999999999999999999999999999998765543 356899


Q ss_pred             EEEEcCCCCEEEccccc
Q psy11015        339 AAAGRTGGPIRASPLLL  355 (360)
Q Consensus       339 ~~~~~~~g~~las~~~~  355 (360)
                      ++-+.|+|.|+|-+.-+
T Consensus       597 SLg~cP~~dWlavGMen  613 (705)
T KOG0639|consen  597 SLGYCPTGDWLAVGMEN  613 (705)
T ss_pred             ecccCCCccceeeeccc
Confidence            99999999999987643

>KOG4328|consensus

Probab=99.62  E-value=7.2e-15  Score=130.04  Aligned_cols=177  Identities=19%  Similarity=0.144  Sum_probs=128.6

Q ss_pred             eecCCeEEEeeecC--ccceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeE---------------
Q psy11015        153 KVQTSKIVSSFKTS--LLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKC---------------  214 (360)
Q Consensus       153 ~~~~~~~~~~~~~~--~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~---------------  214 (360)
                      .|...+-|..|+..  ......+..+..|.++|.++.|+|... .+++.|.||+|+.-|++.+..               
T Consensus       205 ~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~  284 (498)
T KOG4328|consen  205 VGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSS  284 (498)
T ss_pred             EccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeee
Confidence            34555556666664  344456777889999999999999654 899999999999988764310               


Q ss_pred             ------------------------------EEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEEcccCeeEeeeCCC
Q psy11015        215 ------------------------------VLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVSNND  263 (360)
Q Consensus       215 ------------------------------~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~  263 (360)
                                                    ...+.-|...|++++++|.. .+++|||.|++++|||++.-...      
T Consensus       285 ~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K------  358 (498)
T KOG4328|consen  285 LDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGK------  358 (498)
T ss_pred             ccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCC------
Confidence                                          00012366789999999965 57899999999999999854211      


Q ss_pred             CCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC----CCeEEEEEecCCC----
Q psy11015        264 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE----TGTILQSLTEPGE----  335 (360)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~----~~~~~~~l~~h~~----  335 (360)
                                        ..|......|...|.++.|||.|-.|+|.+.|..|+|||..    .-.+..++. |..    
T Consensus       359 ------------------~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~R  419 (498)
T KOG4328|consen  359 ------------------ASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNNRTGR  419 (498)
T ss_pred             ------------------CCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-ccCcccc
Confidence                              11344555799999999999998889999999999999983    222233332 322    


Q ss_pred             --ceEEEEEcCCCCEEEcccc
Q psy11015        336 --AIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       336 --~v~~~~~~~~g~~las~~~  354 (360)
                        .....+|.|+.++++.+..
T Consensus       420 wlT~fKA~W~P~~~li~vg~~  440 (498)
T KOG4328|consen  420 WLTPFKAAWDPDYNLIVVGRY  440 (498)
T ss_pred             cccchhheeCCCccEEEEecc
Confidence              2345689999998887653

>KOG2919|consensus

Probab=99.62  E-value=7e-15  Score=124.97  Aligned_cols=151  Identities=17%  Similarity=0.248  Sum_probs=129.6

Q ss_pred             CCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CCcEEEEEcccCee
Q psy11015        179 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIWQAVINWE  256 (360)
Q Consensus       179 h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~~i~vwd~~~~~~  256 (360)
                      ..+.|.|++|+|... .++.|+...++-||.-..+.++..+.+|.+.|+.++|+++|+.|++|+. |-.|..||++..  
T Consensus       206 q~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~--  283 (406)
T KOG2919|consen  206 QKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYS--  283 (406)
T ss_pred             ccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhc--
Confidence            367789999999655 8999999999999999999999999999999999999999999999886 678999999854  


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC-cEEE--EEEcCCCCEEEEEECCCcEEEEECCC-CeEEEEEec
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN-VVIA--ADWLSDGEQVITASWDRVANLFDVET-GTILQSLTE  332 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~--i~~sp~g~~l~tgs~dg~i~iwd~~~-~~~~~~l~~  332 (360)
                                               ..++..+..|.. .-..  ....|+|++|++|+.||.|++||+.. |..+..+..
T Consensus       284 -------------------------~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~  338 (406)
T KOG2919|consen  284 -------------------------RDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGN  338 (406)
T ss_pred             -------------------------cchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccc
Confidence                                     345666766655 3333  44578999999999999999999998 787888888


Q ss_pred             CCCceEEEEEcCCCCEEEcccccc
Q psy11015        333 PGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      +...++.++++|--+++||++..-
T Consensus       339 ~sd~vNgvslnP~mpilatssGqr  362 (406)
T KOG2919|consen  339 YSDTVNGVSLNPIMPILATSSGQR  362 (406)
T ss_pred             ccccccceecCcccceeeeccCce
Confidence            999999999999999999988654

>KOG1009|consensus

Probab=99.62  E-value=3.8e-15  Score=129.99  Aligned_cols=158  Identities=21%  Similarity=0.275  Sum_probs=128.5

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC--------C--------CeEEEEEeCCCcCeEEEEEee
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--------T--------GKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~--------~--------~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      .-..+..|..|...|+++.|+|+|++|+||+.+|.|.+|-..        +        ....+.+.+|...|..++|+|
T Consensus        54 ~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~  133 (434)
T KOG1009|consen   54 KVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP  133 (434)
T ss_pred             eEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC
Confidence            445677888999999999999999999999999999999765        2        234566788999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015        233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  312 (360)
Q Consensus       233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~  312 (360)
                      ++.++++++.|.++++||+..|                            .....+.+|...|..++|.|-++++++-+.
T Consensus       134 d~~~l~s~s~dns~~l~Dv~~G----------------------------~l~~~~~dh~~yvqgvawDpl~qyv~s~s~  185 (434)
T KOG1009|consen  134 DSNFLVSGSVDNSVRLWDVHAG----------------------------QLLAILDDHEHYVQGVAWDPLNQYVASKSS  185 (434)
T ss_pred             CCceeeeeeccceEEEEEeccc----------------------------eeEeeccccccccceeecchhhhhhhhhcc
Confidence            9999999999999999999877                            456778899999999999999999999999


Q ss_pred             CCcEEEEECCCCeEEEEEe--------cC--CCc-------------eEEEEEcCCCCEEEcccc
Q psy11015        313 DRVANLFDVETGTILQSLT--------EP--GEA-------------IRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       313 dg~i~iwd~~~~~~~~~l~--------~h--~~~-------------v~~~~~~~~g~~las~~~  354 (360)
                      |+..+.+++...+.++...        .+  .+.             ...++|+|+|.++++++-
T Consensus       186 dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag  250 (434)
T KOG1009|consen  186 DRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAG  250 (434)
T ss_pred             CcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccc
Confidence            9988887765433222211        11  111             235678999999998763

>KOG1445|consensus

Probab=99.62  E-value=1.9e-15  Score=138.49  Aligned_cols=147  Identities=20%  Similarity=0.313  Sum_probs=117.2

Q ss_pred             CCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCC-------eEEEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEE
Q psy11015        180 RDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG-------KCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       180 ~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~-------~~~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd  250 (360)
                      ...|+++.|+| |...|+.|+.||.|++|.+..+       .+...+.+|...|+++.|+|- .+.|++++.|-+|++||
T Consensus       627 gt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWD  706 (1012)
T KOG1445|consen  627 GTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWD  706 (1012)
T ss_pred             CceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeee
Confidence            34689999999 5569999999999999998754       456778899999999999994 46889999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe-EEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT-ILQS  329 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~-~~~~  329 (360)
                      ++++                            .....+.+|++.|.+++|+|+|+.++|.+.||+|++|..+++. .++.
T Consensus       707 l~~~----------------------------~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~E  758 (1012)
T KOG1445|consen  707 LANA----------------------------KLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYE  758 (1012)
T ss_pred             hhhh----------------------------hhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCcccc
Confidence            9876                            3456688999999999999999999999999999999988764 3333


Q ss_pred             EecC-CCceEEEEEcCCCCEE-Ecccc
Q psy11015        330 LTEP-GEAIRAAAGRTGGPIR-ASPLL  354 (360)
Q Consensus       330 l~~h-~~~v~~~~~~~~g~~l-as~~~  354 (360)
                      -.+. ...-..+.|.=+|+++ +++.|
T Consensus       759 g~gpvgtRgARi~wacdgr~viv~Gfd  785 (1012)
T KOG1445|consen  759 GKGPVGTRGARILWACDGRIVIVVGFD  785 (1012)
T ss_pred             CCCCccCcceeEEEEecCcEEEEeccc
Confidence            3332 1222446677677755 45444

>KOG4283|consensus

Probab=99.61  E-value=2.9e-14  Score=119.81  Aligned_cols=162  Identities=23%  Similarity=0.338  Sum_probs=119.6

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC-eEEEEE--------------eCCCcCeEEEEE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG-KCVLQY--------------SGHSGSVNSVRF  230 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~-~~~~~~--------------~~h~~~v~~i~~  230 (360)
                      ..+|.+.+++.||++.|.++.|+|... .|+|||.||.||+||++.. .|...+              ..|.+.|+.++|
T Consensus       175 i~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~  254 (397)
T KOG4283|consen  175 IASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAW  254 (397)
T ss_pred             ccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeee
Confidence            467788899999999999999999877 7999999999999999754 344333              257788999999


Q ss_pred             eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE
Q psy11015        231 LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  310 (360)
Q Consensus       231 ~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg  310 (360)
                      ..+|.++++++.|..+++|+..+|......                    .+.....-..|- .+. +. +.+...++--
T Consensus       255 tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~--------------------~g~~~~n~~~~~-~~~-~~-~~~s~vfv~~  311 (397)
T KOG4283|consen  255 TSDARYLASCGTDDRIRVWNMESGRNTLRE--------------------FGPIIHNQTTSF-AVH-IQ-SMDSDVFVLF  311 (397)
T ss_pred             cccchhhhhccCccceEEeecccCcccccc--------------------cccccccccccc-eEE-Ee-ecccceEEEE
Confidence            999999999999999999999887543321                    011111111111 111 22 3344455555


Q ss_pred             ECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEc
Q psy11015        311 SWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       311 s~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las  351 (360)
                      -.++.+.++++-.|..+..+..|...|.+.++.|+-+...+
T Consensus       312 p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~t  352 (397)
T KOG4283|consen  312 PNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFT  352 (397)
T ss_pred             ecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhc
Confidence            56689999999999999999999889999988877544333

>KOG2048|consensus

Probab=99.60  E-value=7.2e-14  Score=129.17  Aligned_cols=170  Identities=16%  Similarity=0.182  Sum_probs=134.7

Q ss_pred             cCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE--EEEeCCCcCeEEEEEeeCCCEEEEEeC
Q psy11015        165 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV--LQYSGHSGSVNSVRFLPNKDLVLSASG  242 (360)
Q Consensus       165 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~--~~~~~h~~~v~~i~~~p~~~~l~s~s~  242 (360)
                      |+..++.....+....+.||+++.+|.+..++.|+.||.+..++...++..  ..+....+.|.+++|+|++..+++|+.
T Consensus        95 wDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~  174 (691)
T KOG2048|consen   95 WDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSI  174 (691)
T ss_pred             EecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEeccc
Confidence            344667788888888999999999999999999999998888888777543  334445689999999999999999999


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      ||.|++||+.++......                     ...+-.+.. ..--|+++.|..+ ..|++|..-|+|.+||.
T Consensus       175 Dg~Iriwd~~~~~t~~~~---------------------~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~  232 (691)
T KOG2048|consen  175 DGVIRIWDVKSGQTLHII---------------------TMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDS  232 (691)
T ss_pred             CceEEEEEcCCCceEEEe---------------------eecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcc
Confidence            999999999988554310                     001111211 3345788888854 58999999999999999


Q ss_pred             CCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccc
Q psy11015        322 ETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLA  356 (360)
Q Consensus       322 ~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~  356 (360)
                      ..|..++.+..|...|.+++..+++..+++|. |..
T Consensus       233 ~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~  268 (691)
T KOG2048|consen  233 IFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPK  268 (691)
T ss_pred             cCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCc
Confidence            99999999999999999999999976665544 543

>KOG0288|consensus

Probab=99.60  E-value=3.6e-16  Score=136.55  Aligned_cols=132  Identities=25%  Similarity=0.422  Sum_probs=106.1

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      ........+..|.+.|..+.|-++...|++|+.|..|++|++..++  .+.++.|..+.|+++.|.+++..+++++.|+.
T Consensus       163 lpS~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~  242 (459)
T KOG0288|consen  163 LPSRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKN  242 (459)
T ss_pred             cchhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCc
Confidence            3345566778999999999999998899999999999999998766  67778888899999999999999999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      +++|++...                            ....++.||+..|+++.|......+++|+.|.++++||+....
T Consensus       243 ~r~Wnvd~~----------------------------r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~  294 (459)
T KOG0288|consen  243 LRLWNVDSL----------------------------RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAY  294 (459)
T ss_pred             eeeeeccch----------------------------hhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhh
Confidence            999998765                            4567788888888888776544446666666666555555444


Q ss_pred             EE
Q psy11015        326 IL  327 (360)
Q Consensus       326 ~~  327 (360)
                      |.
T Consensus       295 C~  296 (459)
T KOG0288|consen  295 CS  296 (459)
T ss_pred             ee
Confidence            43

>KOG1408|consensus

Probab=99.60  E-value=1.1e-14  Score=135.26  Aligned_cols=176  Identities=19%  Similarity=0.259  Sum_probs=134.5

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee---CCCEEEEEeCCCcEEEEEcccC
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP---NKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p---~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      +-+-++.+++++|+|++|++|..-|+++||++..-+....+..|.+.|.|+.|+-   ...+|++++.|+.|+|||+..+
T Consensus       457 d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn  536 (1080)
T KOG1408|consen  457 DSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN  536 (1080)
T ss_pred             CcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc
Confidence            3456799999999999999999999999999998888889999999999999984   2468999999999999999887


Q ss_pred             eeEeeeCCCCCCCCCCC------------CCCCCCcccccc-----ceeEeeCC-----CCcEEEEEEcCCCCEEEEEEC
Q psy11015        255 WECLVSNNDNDSDLDES------------KEPDESSITLRT-----PVKELLGH-----SNVVIAADWLSDGEQVITASW  312 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~-----~~~~~~~h-----~~~v~~i~~sp~g~~l~tgs~  312 (360)
                      ..........++..+..            ..+.+..+.+..     ....+..|     ...++.++..|..++++|++.
T Consensus       537 y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQ  616 (1080)
T KOG1408|consen  537 YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQ  616 (1080)
T ss_pred             cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEec
Confidence            66655433322211110            011111111111     01112222     246788999999999999999


Q ss_pred             CCcEEEEECCCCeEEEEEec---CCCceEEEEEcCCCCEEEccc
Q psy11015        313 DRVANLFDVETGTILQSLTE---PGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       313 dg~i~iwd~~~~~~~~~l~~---h~~~v~~~~~~~~g~~las~~  353 (360)
                      |+.|+|||+.+|+..+.|++   |.+..-.+...|.|.++||+-
T Consensus       617 Drnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atSc  660 (1080)
T KOG1408|consen  617 DRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSC  660 (1080)
T ss_pred             ccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEee
Confidence            99999999999999999975   567788899999999999875

>KOG0307|consensus

Probab=99.59  E-value=1.7e-15  Score=147.39  Aligned_cols=196  Identities=15%  Similarity=0.221  Sum_probs=145.0

Q ss_pred             eEEEeeecCc----cceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEE--eCCCcCeEEEEE
Q psy11015        158 KIVSSFKTSL----LSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQY--SGHSGSVNSVRF  230 (360)
Q Consensus       158 ~~~~~~~~~~----~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~--~~h~~~v~~i~~  230 (360)
                      +.+..|....    .....+.++..|++.|..+.|++.+. +||+|+.||.|.|||+..-+.-..+  ....+.|.+++|
T Consensus        90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsW  169 (1049)
T KOG0307|consen   90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSW  169 (1049)
T ss_pred             CceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEecc
Confidence            3344455433    34567788899999999999999765 9999999999999999864322222  224567999999


Q ss_pred             eeC-CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC---CCCCC------------CCCCCccccc------cceeEe
Q psy11015        231 LPN-KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSD---LDESK------------EPDESSITLR------TPVKEL  288 (360)
Q Consensus       231 ~p~-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~---~~~~~------------~~~~~~~~~~------~~~~~~  288 (360)
                      +.. ...|++++.+|++.|||++...............   ...+.            ......+..|      .+++++
T Consensus       170 NrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~  249 (1049)
T KOG0307|consen  170 NRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKIL  249 (1049)
T ss_pred             chhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhh
Confidence            864 3577889999999999999886555433332210   00011            0111122333      378888


Q ss_pred             eCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEccc
Q psy11015        289 LGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL  353 (360)
Q Consensus       289 ~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~  353 (360)
                      .+|...|.++.|++.+ +++++++.|+.+.+|+.++|+.+..+....+.+..+.|.|... .++.++
T Consensus       250 ~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~as  316 (1049)
T KOG0307|consen  250 EGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAAS  316 (1049)
T ss_pred             cccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhhe
Confidence            9999999999999976 7889999999999999999999999988889999999999876 444444

>KOG1007|consensus

Probab=99.59  E-value=1.7e-14  Score=120.90  Aligned_cols=150  Identities=24%  Similarity=0.346  Sum_probs=120.4

Q ss_pred             cCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEccc
Q psy11015        178 GHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       178 ~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~  253 (360)
                      +|+...++-+|+|  +++.+++. .|+++..||+++.++...+. +|...|.++.|+|+.+ +|++|+.||.|++||.+.
T Consensus       168 e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~  246 (370)
T KOG1007|consen  168 EMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRK  246 (370)
T ss_pred             cccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccC
Confidence            3666777888998  56666655 47899999999887766664 6778899999999876 678899999999999875


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEECCCcEEEEECCCC--------
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETG--------  324 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~dg~i~iwd~~~~--------  324 (360)
                      .                           ..|+..+.+|...|+++.|+|.-. ++++||.|..|.+|....-        
T Consensus       247 t---------------------------k~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~  299 (370)
T KOG1007|consen  247 T---------------------------KFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEF  299 (370)
T ss_pred             C---------------------------CccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecccccccccccc
Confidence            4                           357899999999999999999654 5689999999999964311        


Q ss_pred             ---------------------eEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        325 ---------------------TILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       325 ---------------------~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                                           ..+.++..|...|++++|+.-.+|++++.-+
T Consensus       300 ~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSY  351 (370)
T KOG1007|consen  300 EDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSY  351 (370)
T ss_pred             ccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEecc
Confidence                                 1244677899999999999988888776543

>KOG0303|consensus

Probab=99.59  E-value=4.5e-14  Score=123.00  Aligned_cols=158  Identities=24%  Similarity=0.262  Sum_probs=123.7

Q ss_pred             eeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      ..+..|.||+..|--++|+|.. +.|+|+|.|.+|.+||+.+|..+-.+. |..-|+++.|+.+|.++++.+.|+.|+||
T Consensus       122 epvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~  200 (472)
T KOG0303|consen  122 EPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVI  200 (472)
T ss_pred             cceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEE
Confidence            5688999999999999999964 589999999999999999999888888 99999999999999999999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC-cEEEEEEcCCCCEEEEE---ECCCcEEEEECCCCe
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN-VVIAADWLSDGEQVITA---SWDRVANLFDVETGT  325 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~i~~sp~g~~l~tg---s~dg~i~iwd~~~~~  325 (360)
                      |.+++.                            .+....+|.+ ....+-|..+|..+-||   ..++.+-+||..+..
T Consensus       201 dpr~~~----------------------------~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~  252 (472)
T KOG0303|consen  201 DPRRGT----------------------------VVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLE  252 (472)
T ss_pred             cCCCCc----------------------------EeeecccccCCCcceeEEeccCceeeeccccccccceeccCccccc
Confidence            999883                            3444456654 34455677788855555   246889999876543


Q ss_pred             ---EEEEEecCCCceEEEEEcCCCC--EEEcccccchh
Q psy11015        326 ---ILQSLTEPGEAIRAAAGRTGGP--IRASPLLLAIR  358 (360)
Q Consensus       326 ---~~~~l~~h~~~v~~~~~~~~g~--~las~~~~~ir  358 (360)
                         ...++.. ++.|.---|.++..  |++.=.|+.||
T Consensus       253 eP~~~~elDt-SnGvl~PFyD~dt~ivYl~GKGD~~IR  289 (472)
T KOG0303|consen  253 EPIALQELDT-SNGVLLPFYDPDTSIVYLCGKGDSSIR  289 (472)
T ss_pred             CcceeEEecc-CCceEEeeecCCCCEEEEEecCCcceE
Confidence               3445553 34455555677665  55666677776

>KOG2394|consensus

Probab=99.58  E-value=1.9e-14  Score=129.72  Aligned_cols=137  Identities=17%  Similarity=0.244  Sum_probs=112.2

Q ss_pred             CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCC--------------C--------------eEEEEEeCCCcCeEEEEE
Q psy11015        180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQT--------------G--------------KCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~--------------~--------------~~~~~~~~h~~~v~~i~~  230 (360)
                      +..|+|+.|-|.+. .++.+-.+|.+.+||...              +              .++..+.--.+.|+.++|
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F  298 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF  298 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence            46899999999655 777788899999997531              1              122223334468999999


Q ss_pred             eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE
Q psy11015        231 LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  310 (360)
Q Consensus       231 ~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg  310 (360)
                      +|||++||+.|.||.++|||..+.                            ..+..+...-+...|++|+|||+||+||
T Consensus       299 S~DG~~LA~VSqDGfLRvF~fdt~----------------------------eLlg~mkSYFGGLLCvcWSPDGKyIvtG  350 (636)
T KOG2394|consen  299 SPDGKYLATVSQDGFLRIFDFDTQ----------------------------ELLGVMKSYFGGLLCVCWSPDGKYIVTG  350 (636)
T ss_pred             cCCCceEEEEecCceEEEeeccHH----------------------------HHHHHHHhhccceEEEEEcCCccEEEec
Confidence            999999999999999999998754                            2233344445678999999999999999


Q ss_pred             ECCCcEEEEECCCCeEEEEEecCCCceEEEEEcC
Q psy11015        311 SWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT  344 (360)
Q Consensus       311 s~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~  344 (360)
                      +.|.-|.||.+..++.+..-.+|...|+.++|.|
T Consensus       351 GEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  351 GEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             CCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence            9999999999999999999999999999999997

>KOG2106|consensus

Probab=99.58  E-value=1.2e-13  Score=123.81  Aligned_cols=148  Identities=17%  Similarity=0.268  Sum_probs=121.5

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~  253 (360)
                      .+..||.+..|.++.+|+.+.++|++.|+.+++|+  ..++..+.. ...++.|+.|+|.| .++.|+..|...|.|..+
T Consensus       362 ~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~  437 (626)
T KOG2106|consen  362 LTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTET  437 (626)
T ss_pred             EEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEeccc
Confidence            44578999999999999999999999999999999  445555444 45788999999999 999999999999999876


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC-CCeEEEEE-e
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE-TGTILQSL-T  331 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~-~~~~~~~l-~  331 (360)
                      .                             .+.++.....++++++|+|+|.+||.|+.|+.|.||.+. +|..+... +
T Consensus       438 ~-----------------------------~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k  488 (626)
T KOG2106|consen  438 Q-----------------------------DLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGK  488 (626)
T ss_pred             c-----------------------------eeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeee
Confidence            4                             122233237899999999999999999999999999886 44444444 3


Q ss_pred             cCCCceEEEEEcCCCCEEEcccc
Q psy11015        332 EPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       332 ~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      .+..+|+.+.|++|++++.+-+.
T Consensus       489 ~~gs~ithLDwS~Ds~~~~~~S~  511 (626)
T KOG2106|consen  489 CSGSPITHLDWSSDSQFLVSNSG  511 (626)
T ss_pred             ecCceeEEeeecCCCceEEeccC
Confidence            35589999999999999998763

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.58  E-value=2.3e-13  Score=113.65  Aligned_cols=138  Identities=14%  Similarity=0.158  Sum_probs=98.8

Q ss_pred             EEEEECCCCCEEEEEeC---C-------CcEEEEECCC-CeEEEEEeC-CCcCeEEEEEeeCCCEEEEE--eCCCcEEEE
Q psy11015        184 WDVAVRPGQPVLGSASA---D-------RTVRLWSTQT-GKCVLQYSG-HSGSVNSVRFLPNKDLVLSA--SGDKSVHIW  249 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~---D-------g~v~iwd~~~-~~~~~~~~~-h~~~v~~i~~~p~~~~l~s~--s~d~~i~vw  249 (360)
                      ..+.|+|+|..|+.-..   |       |...+|.++. +.....+.- ..++|.+++|+|+|+.|+..  ..++.|.+|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly   88 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY   88 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence            35678998885544322   1       2345555522 233344432 45679999999999987554  467899999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcEEEEECCCCeE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTI  326 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i~iwd~~~~~~  326 (360)
                      |++.                             .++..+  +...+..+.|+|+|++|++|+.+   |.|.+||+++.+.
T Consensus        89 d~~~-----------------------------~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~  137 (194)
T PF08662_consen   89 DVKG-----------------------------KKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK  137 (194)
T ss_pred             cCcc-----------------------------cEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE
Confidence            9852                             234444  34677899999999999998754   6799999999998


Q ss_pred             EEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        327 LQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       327 ~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      +.... |. .++.++|+|+|++++|+..
T Consensus       138 i~~~~-~~-~~t~~~WsPdGr~~~ta~t  163 (194)
T PF08662_consen  138 ISTFE-HS-DATDVEWSPDGRYLATATT  163 (194)
T ss_pred             eeccc-cC-cEEEEEEcCCCCEEEEEEe
Confidence            88775 33 4789999999999998863

>KOG1034|consensus

Probab=99.58  E-value=6.2e-14  Score=119.47  Aligned_cols=127  Identities=27%  Similarity=0.546  Sum_probs=109.1

Q ss_pred             eeeeeee--cCCCCEEEEEECCC----CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCC
Q psy11015        171 YKIRSFS--GHRDGVWDVAVRPG----QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGD  243 (360)
Q Consensus       171 ~~~~~l~--~h~~~V~~l~~~~~----~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d  243 (360)
                      +.++.+.  .|...-+.++|+-+    .++++.||.-|.|+|.|+.++++...+.+|...|+.|.|+|+. ++++++|.|
T Consensus        78 r~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD  157 (385)
T KOG1034|consen   78 RLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKD  157 (385)
T ss_pred             eeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCC
Confidence            3444443  36777788888653    4589999999999999999999999999999999999999965 789999999


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      .+|++|++++..+...                         ..-+.||.+.|.++.|+++|.+|++++.|..|++|++.
T Consensus       158 ~svRlwnI~~~~Cv~V-------------------------fGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~  211 (385)
T KOG1034|consen  158 HSVRLWNIQTDVCVAV-------------------------FGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN  211 (385)
T ss_pred             ceEEEEeccCCeEEEE-------------------------ecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence            9999999998855543                         44456899999999999999999999999999999987

>KOG0642|consensus

Probab=99.57  E-value=1.3e-14  Score=131.43  Aligned_cols=139  Identities=24%  Similarity=0.335  Sum_probs=115.5

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC--------CeEEEEEeCCCcCeEEEEEeeCCCEEEEEe
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--------GKCVLQYSGHSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~--------~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      +.+-.++..|.+.|.+++|+|....|++|+.||++++|++..        -+++.+|.+|.++|.|+++.+.+..+++|+
T Consensus       284 w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg  363 (577)
T KOG0642|consen  284 WNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGG  363 (577)
T ss_pred             cceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeec
Confidence            455568899999999999999999999999999999999932        268899999999999999999999999999


Q ss_pred             CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        242 GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      .||+|+.|++..+....                  ...........+.||.+.|+.+++|+....|++++.||++++|+.
T Consensus       364 ~Dg~I~~w~~p~n~dp~------------------ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~  425 (577)
T KOG0642|consen  364 IDGTIRCWNLPPNQDPD------------------DSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEP  425 (577)
T ss_pred             cCceeeeeccCCCCCcc------------------cccCcchhccceeccccceeeeeecccccceeeecCCceEEeecc
Confidence            99999999875221000                  001111245678899999999999999999999999999999997


Q ss_pred             CCCeE
Q psy11015        322 ETGTI  326 (360)
Q Consensus       322 ~~~~~  326 (360)
                      .....
T Consensus       426 ~~~~~  430 (577)
T KOG0642|consen  426 TEESP  430 (577)
T ss_pred             CCcCc
Confidence            65554

>KOG1523|consensus

Probab=99.57  E-value=3.8e-14  Score=120.38  Aligned_cols=169  Identities=15%  Similarity=0.156  Sum_probs=134.4

Q ss_pred             EeeecCccc-eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEEEeCCCcCeEEEEEeeCCCE
Q psy11015        161 SSFKTSLLS-CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDL  236 (360)
Q Consensus       161 ~~~~~~~~~-~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~~~v~~i~~~p~~~~  236 (360)
                      -++...... ....+++..|...|++++|+|..+.|++|+.|...+||....+   ++...+..|...+++|.|+|.++.
T Consensus        35 hiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enk  114 (361)
T KOG1523|consen   35 HIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENK  114 (361)
T ss_pred             EEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCce
Confidence            345554555 7889999999999999999999999999999999999999433   566667779999999999999999


Q ss_pred             EEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcE
Q psy11015        237 VLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA  316 (360)
Q Consensus       237 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i  316 (360)
                      |++||..+.|.||-+...+                        ..+-..+.-..+.+.|++++|+|++-++++||.|+.+
T Consensus       115 FAVgSgar~isVcy~E~EN------------------------dWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~  170 (361)
T KOG1523|consen  115 FAVGSGARLISVCYYEQEN------------------------DWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKC  170 (361)
T ss_pred             EEeccCccEEEEEEEeccc------------------------ceehhhhhCCccccceeeeeccCCcceecccccCcce
Confidence            9999999999999765431                        1222223334577889999999999999999999999


Q ss_pred             EEEECC------------------CCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        317 NLFDVE------------------TGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       317 ~iwd~~------------------~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +|+..-                  -|+.+.++....+.|..+.|+|.|..+|-..
T Consensus       171 rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~  225 (361)
T KOG1523|consen  171 RVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVG  225 (361)
T ss_pred             eEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEec
Confidence            999631                  1333444445577899999999999888443

>KOG4378|consensus

Probab=99.57  E-value=4.3e-14  Score=126.35  Aligned_cols=174  Identities=17%  Similarity=0.185  Sum_probs=140.8

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC-CcCeEEEE
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVR  229 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h-~~~v~~i~  229 (360)
                      ...|..+.+|.+|+..  .-.+.+.+++|++.|++|.++....+||+++..|-|.|..+.++.....|... ...|+-+.
T Consensus        94 ~~sgG~~~~Vkiwdl~--~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~  171 (673)
T KOG4378|consen   94 EISGGQSGCVKIWDLR--AKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLR  171 (673)
T ss_pred             eeccCcCceeeehhhH--HHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEee
Confidence            3455666666666654  45567888999999999999999999999999999999999999877777633 33577999


Q ss_pred             EeeCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EE
Q psy11015        230 FLPNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QV  307 (360)
Q Consensus       230 ~~p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l  307 (360)
                      |+|..+ +|.+++.+|.|.+||+.....                           .......|..+...++|+|... .|
T Consensus       172 ys~skr~lL~~asd~G~VtlwDv~g~sp---------------------------~~~~~~~HsAP~~gicfspsne~l~  224 (673)
T KOG4378|consen  172 YSPSKRFLLSIASDKGAVTLWDVQGMSP---------------------------IFHASEAHSAPCRGICFSPSNEALL  224 (673)
T ss_pred             cccccceeeEeeccCCeEEEEeccCCCc---------------------------ccchhhhccCCcCcceecCCccceE
Confidence            999876 456788999999999875411                           1233457999999999999765 57


Q ss_pred             EEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        308 ITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       308 ~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ++.+.|..|.+||.+.......+. ...+.++++|.++|-+|+.|..
T Consensus       225 vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s  270 (673)
T KOG4378|consen  225 VSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNS  270 (673)
T ss_pred             EEecccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecC
Confidence            899999999999999887777776 4578999999999999998874

>KOG0322|consensus

Probab=99.57  E-value=1.9e-14  Score=119.14  Aligned_cols=154  Identities=18%  Similarity=0.165  Sum_probs=119.2

Q ss_pred             cCCCCEEEEEECCC-CC--EEEEEeCCCcEEEEECCCCeEE----------EEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        178 GHRDGVWDVAVRPG-QP--VLGSASADRTVRLWSTQTGKCV----------LQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       178 ~h~~~V~~l~~~~~-~~--~l~sgs~Dg~v~iwd~~~~~~~----------~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      +..+.++|..+... +.  +++.|-++|.|.+||+.++..+          ..+..|..+|.++.|.+.-+.=++|+.+.
T Consensus       148 ~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~d  227 (323)
T KOG0322|consen  148 SKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADD  227 (323)
T ss_pred             cccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccc
Confidence            45678888885442 22  6778889999999999987433          33346899999999987665667888888


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      .+..|.+.......                     .   ......-....|..+.+.||++.+||++|||.||||..+++
T Consensus       228 kl~~~Sl~~s~gsl---------------------q---~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl  283 (323)
T KOG0322|consen  228 KLVMYSLNHSTGSL---------------------Q---IRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTL  283 (323)
T ss_pred             cceeeeeccccCcc---------------------c---ccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccC
Confidence            89999876431110                     0   11122223456888999999999999999999999999999


Q ss_pred             eEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      +++..++.|.+.|.+++|+|+..++|+++..
T Consensus       284 ~pLAVLkyHsagvn~vAfspd~~lmAaaskD  314 (323)
T KOG0322|consen  284 NPLAVLKYHSAGVNAVAFSPDCELMAAASKD  314 (323)
T ss_pred             CchhhhhhhhcceeEEEeCCCCchhhhccCC
Confidence            9999999999999999999998888877743

>KOG0644|consensus

Probab=99.57  E-value=3.8e-15  Score=140.34  Aligned_cols=198  Identities=20%  Similarity=0.301  Sum_probs=145.2

Q ss_pred             eeeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEE
Q psy11015        149 TNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV  228 (360)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i  228 (360)
                      ...+.|..+.++.+|.  ..+..++....||.+.|+.++++...-.++++|.|..|++|.+.++.++..+.||+|.|++|
T Consensus       203 ~~Iitgsdd~lvKiwS--~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtai  280 (1113)
T KOG0644|consen  203 RYIITGSDDRLVKIWS--METARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAI  280 (1113)
T ss_pred             ceEeecCccceeeeee--ccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeee
Confidence            3445566666666666  67888999999999999999999988899999999999999999999999999999999999


Q ss_pred             EEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCC-----------------CCCCCCC------C--------------
Q psy11015        229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNND-----------------NDSDLDE------S--------------  271 (360)
Q Consensus       229 ~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~-----------------~~~~~~~------~--------------  271 (360)
                      +|+|..    +.+.||++++||.+-.  ...+...                 ....+..      .              
T Consensus       281 afsP~~----sss~dgt~~~wd~r~~--~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~  354 (1113)
T KOG0644|consen  281 AFSPRA----SSSDDGTCRIWDARLE--PRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNL  354 (1113)
T ss_pred             ccCccc----cCCCCCceEecccccc--ccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccc
Confidence            999954    7889999999998711  1111100                 0000000      0              


Q ss_pred             ---C-CCC----------------CCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEECCCcEEEEECCCCeEEEEE
Q psy11015        272 ---K-EPD----------------ESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANLFDVETGTILQSL  330 (360)
Q Consensus       272 ---~-~~~----------------~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs~dg~i~iwd~~~~~~~~~l  330 (360)
                         . ...                .+....+...+.+.+|...+..+.++|-...+ .+++.||...|||+-.|.+++..
T Consensus       355 lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y  434 (1113)
T KOG0644|consen  355 LIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHY  434 (1113)
T ss_pred             eEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceee
Confidence               0 000                00011122345566788999999999966554 68899999999999999887766


Q ss_pred             ecCCCceEEEEEcCCCCEEEcccc
Q psy11015        331 TEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ......+...+|+++|..++-+-+
T Consensus       435 ~~gh~kl~d~kFSqdgts~~lsd~  458 (1113)
T KOG0644|consen  435 FIGHGKLVDGKFSQDGTSIALSDD  458 (1113)
T ss_pred             ecccceeeccccCCCCceEecCCC
Confidence            544566778899999987775443

>KOG1273|consensus

Probab=99.56  E-value=4.2e-14  Score=119.89  Aligned_cols=187  Identities=12%  Similarity=0.086  Sum_probs=119.4

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCc
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKS  245 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~  245 (360)
                      ..+...-+.+.+|..+|.+++|+++|+.|+|+|.|..|.+||+..|.+++.+. ..++|+.+.|+|..+ .+++.-.+..
T Consensus        52 ~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~s  130 (405)
T KOG1273|consen   52 FDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEES  130 (405)
T ss_pred             ccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCC
Confidence            34555778889999999999999999999999999999999999999988887 677888888888543 4444444444


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCC---CCCCCc---------------cccccceeEeeCCC-CcEEEEEEcCCCCE
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESK---EPDESS---------------ITLRTPVKELLGHS-NVVIAADWLSDGEQ  306 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~~~~~~~~~h~-~~v~~i~~sp~g~~  306 (360)
                      -.+-++..+....-...+.......+.   ....+.               .....++..+.--+ ..|..+-++..|+.
T Consensus       131 p~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~  210 (405)
T KOG1273|consen  131 PVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRF  210 (405)
T ss_pred             cEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcE
Confidence            445554433222211111111111111   000000               00112233333223 56788899999999


Q ss_pred             EEEEECCCcEEEEECCCC----e--EE---EEEe--cCCCceEEEEEcCCCCEEEcccc
Q psy11015        307 VITASWDRVANLFDVETG----T--IL---QSLT--EPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       307 l~tgs~dg~i~iwd~~~~----~--~~---~~l~--~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      |++-+.|+.||.|++..-    +  .+   +.+.  .....-.+++|+.+|.++++++.
T Consensus       211 liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~  269 (405)
T KOG1273|consen  211 LIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSA  269 (405)
T ss_pred             EEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccc
Confidence            999999999999997621    1  00   1110  01223467889999999998774

>KOG2048|consensus

Probab=99.55  E-value=9.4e-13  Score=121.91  Aligned_cols=175  Identities=15%  Similarity=0.208  Sum_probs=136.4

Q ss_pred             cCCeEEEeeecCccceeeeeeeecCC-CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        155 QTSKIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      .....+-.|+... ...+...+.|+. ..|-+++|.+. ..|+|.+.+|+|.-||+.+++....+....+.|++++.+|.
T Consensus        44 Rt~g~IEiwN~~~-~w~~~~vi~g~~drsIE~L~W~e~-~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~  121 (691)
T KOG2048|consen   44 RTDGNIEIWNLSN-NWFLEPVIHGPEDRSIESLAWAEG-GRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPE  121 (691)
T ss_pred             ccCCcEEEEccCC-CceeeEEEecCCCCceeeEEEccC-CeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCc
Confidence            3344455555544 555667777775 47999999954 48999999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  313 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d  313 (360)
                      +..++.|+.||.+..++...+....                          -..+....+.|.+++|+|++..+++|+.|
T Consensus       122 ~~~l~IgcddGvl~~~s~~p~~I~~--------------------------~r~l~rq~sRvLslsw~~~~~~i~~Gs~D  175 (691)
T KOG2048|consen  122 NTILAIGCDDGVLYDFSIGPDKITY--------------------------KRSLMRQKSRVLSLSWNPTGTKIAGGSID  175 (691)
T ss_pred             cceEEeecCCceEEEEecCCceEEE--------------------------EeecccccceEEEEEecCCccEEEecccC
Confidence            9999999999966666655442221                          23344456899999999999999999999


Q ss_pred             CcEEEEECCCCeEEEEEe-------c-CCCceEEEEEcCCCCEEEcccccch
Q psy11015        314 RVANLFDVETGTILQSLT-------E-PGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       314 g~i~iwd~~~~~~~~~l~-------~-h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      |.|++||..++..++...       . ...-|+++.|-.++.+++.-+.++|
T Consensus       176 g~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V  227 (691)
T KOG2048|consen  176 GVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTV  227 (691)
T ss_pred             ceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceE
Confidence            999999999998777221       1 2345788888888888776665554

>KOG0644|consensus

Probab=99.55  E-value=1.9e-15  Score=142.36  Aligned_cols=121  Identities=27%  Similarity=0.521  Sum_probs=112.4

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      .+.++.+.||...|+|+.|...|.++++|+.|..|+||..+++.|+..+.||.+.|+.++.+.+.-+++++|.|..|++|
T Consensus       180 mk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvW  259 (1113)
T KOG0644|consen  180 MKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVW  259 (1113)
T ss_pred             HHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEE
Confidence            35567788999999999999999999999999999999999999999999999999999999888899999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      .+..+                            .++..+.||++.|++++|+|-.    +.+.||++++||.+
T Consensus       260 rl~~~----------------------------~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r  300 (1113)
T KOG0644|consen  260 RLPDG----------------------------APVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR  300 (1113)
T ss_pred             ecCCC----------------------------chHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence            98876                            5788899999999999999964    77889999999987

>KOG0290|consensus

Probab=99.54  E-value=2.4e-13  Score=114.16  Aligned_cols=176  Identities=20%  Similarity=0.225  Sum_probs=125.1

Q ss_pred             cCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCe---EEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEEcc
Q psy11015        178 GHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       178 ~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~  252 (360)
                      .+..++++..|+. +-+++.++|-|-+..|||++++.   ....+-+|...|..|+|...+ +.|++.|.||.+++||++
T Consensus       148 ~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR  227 (364)
T KOG0290|consen  148 EFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR  227 (364)
T ss_pred             ccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence            3567899999987 45599999999999999999863   356677899999999999755 588999999999999998


Q ss_pred             cCeeE-eeeCCCCCC-CCCCCCC--C----------CCCc------cccccceeEeeCCCCcEEEEEEcCC-CCEEEEEE
Q psy11015        253 INWEC-LVSNNDNDS-DLDESKE--P----------DESS------ITLRTPVKELLGHSNVVIAADWLSD-GEQVITAS  311 (360)
Q Consensus       253 ~~~~~-~~~~~~~~~-~~~~~~~--~----------~~~~------~~~~~~~~~~~~h~~~v~~i~~sp~-g~~l~tgs  311 (360)
                      ...-. ..+..+... +......  .          .+..      .....++..+.+|.+.|++++|.|. +.+|+|++
T Consensus       228 ~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaG  307 (364)
T KOG0290|consen  228 SLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAG  307 (364)
T ss_pred             ccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecC
Confidence            65422 222222101 1100000  0          0000      1123478889999999999999995 56899999


Q ss_pred             CCCcEEEEECCCCeE------EEEEecCCCceEEEEEcC-CCCEEEcccc
Q psy11015        312 WDRVANLFDVETGTI------LQSLTEPGEAIRAAAGRT-GGPIRASPLL  354 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~------~~~l~~h~~~v~~~~~~~-~g~~las~~~  354 (360)
                      .|..+-+||+...-.      +-... .++.|+.+.|++ .+.+++-...
T Consensus       308 DD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  308 DDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             CcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEec
Confidence            999999999975321      22222 467899999985 4567765544

>KOG1524|consensus

Probab=99.54  E-value=2.7e-14  Score=128.78  Aligned_cols=158  Identities=18%  Similarity=0.226  Sum_probs=119.7

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ..++.-+.+.+|.+.|.|-.|+|+|.-|+|+|+||.|++|. ++|....++-....+|+|++|.|+.+.++-+-++ .+.
T Consensus        92 k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~-h~~  169 (737)
T KOG1524|consen   92 KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGG-HIS  169 (737)
T ss_pred             ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecCC-eEE
Confidence            34556667789999999999999999999999999999999 4565544444466789999999988766554433 233


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +=.+..+                            ..+-....|.+-|.++.|+|..+.+++|+.|-..+|||.. |..+
T Consensus       170 IKpL~~n----------------------------~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~L  220 (737)
T KOG1524|consen  170 IKPLAAN----------------------------SKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANL  220 (737)
T ss_pred             Eeecccc----------------------------cceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-Cccc
Confidence            3222211                            2355567899999999999999999999999999999965 6666


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEcccccch
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      ..-..|..+|++++|.|+ ..++-++.++.
T Consensus       221 f~S~~~ey~ITSva~npd-~~~~v~S~nt~  249 (737)
T KOG1524|consen  221 FTSAAEEYAITSVAFNPE-KDYLLWSYNTA  249 (737)
T ss_pred             ccCChhccceeeeeeccc-cceeeeeeeee
Confidence            666678888999999888 44444444433

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.54  E-value=1.5e-12  Score=116.44  Aligned_cols=159  Identities=17%  Similarity=0.147  Sum_probs=117.1

Q ss_pred             eEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCE
Q psy11015        158 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL  236 (360)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~  236 (360)
                      ..+..|..  .++..+..+.+|.. +.+++|+|++..+ ++++.++.|++||..+++.+..+..+. .+..++|+|+++.
T Consensus        11 ~~v~~~d~--~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~   86 (300)
T TIGR03866        11 NTISVIDT--ATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-DPELFALHPNGKI   86 (300)
T ss_pred             CEEEEEEC--CCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-CccEEEECCCCCE
Confidence            34444443  34566777776644 6789999999865 677889999999999998887776544 3578899999987


Q ss_pred             EEEE-eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC-
Q psy11015        237 VLSA-SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-  314 (360)
Q Consensus       237 l~s~-s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg-  314 (360)
                      ++++ +.|+.+++||+.++..                            +..+. +...+.+++|+|+|.++++++.++ 
T Consensus        87 l~~~~~~~~~l~~~d~~~~~~----------------------------~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~  137 (300)
T TIGR03866        87 LYIANEDDNLVTVIDIETRKV----------------------------LAEIP-VGVEPEGMAVSPDGKIVVNTSETTN  137 (300)
T ss_pred             EEEEcCCCCeEEEEECCCCeE----------------------------EeEee-CCCCcceEEECCCCCEEEEEecCCC
Confidence            7554 5689999999976522                            22232 223467899999999999988775 


Q ss_pred             cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEE
Q psy11015        315 VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       315 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~la  350 (360)
                      .+.+||..++..+..+.. .....+++|+|+|.+++
T Consensus       138 ~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~  172 (300)
T TIGR03866       138 MAHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKELW  172 (300)
T ss_pred             eEEEEeCCCCeEEEEEEc-CCCccEEEECCCCCEEE
Confidence            467889998887765543 33467899999998774

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1310|consensus

Probab=99.53  E-value=3.3e-14  Score=128.54  Aligned_cols=163  Identities=20%  Similarity=0.236  Sum_probs=123.9

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE-eCCCcCeEEEEEeeC--CCEEEEEeCCCcEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPN--KDLVLSASGDKSVH  247 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-~~h~~~v~~i~~~p~--~~~l~s~s~d~~i~  247 (360)
                      .+..++.||+|.|+|+.|+.+|.+|+|||.|-.+.|||.-..+.++.+ .||.+.|.++.|-|.  .+++++|.+|..|+
T Consensus        41 ~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   41 DLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK  120 (758)
T ss_pred             chhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence            345678999999999999999999999999999999999988888777 489999999999984  56899999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCe-
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGT-  325 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~-  325 (360)
                      ++|+.....-..                  ......+......|...|..++-.|++ +.+.+++.||+++-||++... 
T Consensus       121 lfdl~~~~~~~~------------------d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~  182 (758)
T KOG1310|consen  121 LFDLDSSKEGGM------------------DHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHV  182 (758)
T ss_pred             EEeccccccccc------------------ccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCcc
Confidence            999874311100                  001122445566799999999999998 678999999999999998521 


Q ss_pred             EEEE------Ee---cCCCceEEEEEcCCCC-EEEc
Q psy11015        326 ILQS------LT---EPGEAIRAAAGRTGGP-IRAS  351 (360)
Q Consensus       326 ~~~~------l~---~h~~~v~~~~~~~~g~-~las  351 (360)
                      |-..      +.   ..--...+++.+|..+ ++|-
T Consensus       183 c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laV  218 (758)
T KOG1310|consen  183 CNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAV  218 (758)
T ss_pred             CCccccccHHHHHhchhhheeeeeeecCCCCceEEe
Confidence            1111      11   1112457888888654 4443

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.53  E-value=1.4e-12  Score=108.97  Aligned_cols=118  Identities=18%  Similarity=0.357  Sum_probs=90.9

Q ss_pred             CCCCEEEEEECCCCCEEEE--EeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC---CcEEEEEccc
Q psy11015        179 HRDGVWDVAVRPGQPVLGS--ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAVI  253 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~s--gs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d---~~i~vwd~~~  253 (360)
                      +.++|.+++|+|+++.|+.  |..++.|.+||++ ++.+..+.  ...++.|.|+|+|+++++|+.+   |.+.+||+++
T Consensus        58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~  134 (194)
T PF08662_consen   58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK  134 (194)
T ss_pred             CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence            3457999999999997544  4567899999997 66666664  5678899999999999998754   5699999985


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC------CCcEEEEECCCCeEE
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW------DRVANLFDVETGTIL  327 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~------dg~i~iwd~~~~~~~  327 (360)
                      ..                            .+...  +...++.++|+|+|++++|++.      |..++||+.. |+.+
T Consensus       135 ~~----------------------------~i~~~--~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l  183 (194)
T PF08662_consen  135 KK----------------------------KISTF--EHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLL  183 (194)
T ss_pred             CE----------------------------Eeecc--ccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEe
Confidence            52                            22222  2235789999999999998864      7889999974 7766


Q ss_pred             EEE
Q psy11015        328 QSL  330 (360)
Q Consensus       328 ~~l  330 (360)
                      ...
T Consensus       184 ~~~  186 (194)
T PF08662_consen  184 YKK  186 (194)
T ss_pred             Eec
Confidence            554

>KOG0270|consensus

Probab=99.53  E-value=3.7e-13  Score=118.95  Aligned_cols=155  Identities=20%  Similarity=0.174  Sum_probs=120.5

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCe-EEEEEeCCCcCeEEEEEeeCC-CEEE
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGK-CVLQYSGHSGSVNSVRFLPNK-DLVL  238 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~-~~~~~~~h~~~v~~i~~~p~~-~~l~  238 (360)
                      +..|+..++++..++..|.+.|.++.|+|... +|++||.|++|.+.|.+... .-..++ ..+.|-.++|.|.. ..++
T Consensus       268 V~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~  346 (463)
T KOG0270|consen  268 VKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFF  346 (463)
T ss_pred             EEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEEEecCCCceeEE
Confidence            45556678899999999999999999999654 99999999999999998433 333344 67889999999865 4677


Q ss_pred             EEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEE
Q psy11015        239 SASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVAN  317 (360)
Q Consensus       239 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~  317 (360)
                      ++..||+++-+|++..                           ..++.++..|.+.|.++++++.- .+++|++.|+.|+
T Consensus       347 ~~tddG~v~~~D~R~~---------------------------~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vk  399 (463)
T KOG0270|consen  347 VSTDDGTVYYFDIRNP---------------------------GKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVK  399 (463)
T ss_pred             EecCCceEEeeecCCC---------------------------CCceeEEEeccCCcceEEecCCCCcceeeccccceEE
Confidence            8889999999999865                           35788999999999999998754 4689999999999


Q ss_pred             EEECCCCeE--E--EEEecCCCceEEEEEcCCC
Q psy11015        318 LFDVETGTI--L--QSLTEPGEAIRAAAGRTGG  346 (360)
Q Consensus       318 iwd~~~~~~--~--~~l~~h~~~v~~~~~~~~g  346 (360)
                      +|++..-..  +  +.+.  -+...|.++.|+-
T Consensus       400 lw~~~~~~~~~v~~~~~~--~~rl~c~~~~~~~  430 (463)
T KOG0270|consen  400 LWKFDVDSPKSVKEHSFK--LGRLHCFALDPDV  430 (463)
T ss_pred             EEeecCCCCccccccccc--ccceeecccCCCc
Confidence            999864332  1  1221  1235566666654

>KOG1523|consensus

Probab=99.53  E-value=2.4e-13  Score=115.61  Aligned_cols=151  Identities=13%  Similarity=0.164  Sum_probs=128.9

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      --..+|+|.+|++++..++.+.....|.||.....   +..++++.|...|+.|+|+|..+.|++|+.|+..+||....+
T Consensus         8 ~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~   87 (361)
T KOG1523|consen    8 RLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSG   87 (361)
T ss_pred             eccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCC
Confidence            34568999999999999999999999999988654   588999999999999999999999999999999999987443


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe--EE--EEE
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT--IL--QSL  330 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~--~~--~~l  330 (360)
                                               ..+.+...+..+...++++.|+|.++.|++||.-+.|.||-++...  .+  +.-
T Consensus        88 -------------------------~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhik  142 (361)
T KOG1523|consen   88 -------------------------GTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIK  142 (361)
T ss_pred             -------------------------CeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhC
Confidence                                     3566778888899999999999999999999999999998775332  12  222


Q ss_pred             ecCCCceEEEEEcCCCCEEEccc
Q psy11015        331 TEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +.+...|+++.|+|++-++|+++
T Consensus       143 kPirStv~sldWhpnnVLlaaGs  165 (361)
T KOG1523|consen  143 KPIRSTVTSLDWHPNNVLLAAGS  165 (361)
T ss_pred             CccccceeeeeccCCcceecccc
Confidence            45678999999999999888776

>KOG2055|consensus

Probab=99.52  E-value=1.6e-13  Score=121.80  Aligned_cols=169  Identities=15%  Similarity=0.193  Sum_probs=133.5

Q ss_pred             CCeEEEeeecCccceeeeeeeecCCC-CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC
Q psy11015        156 TSKIVSSFKTSLLSCYKIRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK  234 (360)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~~h~~-~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~  234 (360)
                      ..+..-+|+-.......+....|+.. .+....++|++++|+..|..|.|.+-...++..+.+++ -.+.|..++|+.++
T Consensus       278 rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSds  356 (514)
T KOG2055|consen  278 RRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDS  356 (514)
T ss_pred             cceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCC
Confidence            33444445444455556666777764 45677899999999999999999999999999999998 68899999999999


Q ss_pred             CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC-CCcEEEEEEcCCCCEEEEEECC
Q psy11015        235 DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH-SNVVIAADWLSDGEQVITASWD  313 (360)
Q Consensus       235 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~i~~sp~g~~l~tgs~d  313 (360)
                      ..|++++.+|.|.+||++...                            +++.+... .-.=++++.+++|.|||+||..
T Consensus       357 k~l~~~~~~GeV~v~nl~~~~----------------------------~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~  408 (514)
T KOG2055|consen  357 KELLASGGTGEVYVWNLRQNS----------------------------CLHRFVDDGSVHGTSLCISLNGSYLATGSDS  408 (514)
T ss_pred             cEEEEEcCCceEEEEecCCcc----------------------------eEEEEeecCccceeeeeecCCCceEEeccCc
Confidence            999999999999999998762                            23333321 1123567788999999999999


Q ss_pred             CcEEEEECCC------CeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        314 RVANLFDVET------GTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       314 g~i~iwd~~~------~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      |.|.|||..+      .+++..+..-...|+++.|+|+++++|-++
T Consensus       409 GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS  454 (514)
T KOG2055|consen  409 GIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIAS  454 (514)
T ss_pred             ceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhh
Confidence            9999999653      356677777778999999999999998655

>KOG1188|consensus

Probab=99.52  E-value=1.8e-13  Score=117.32  Aligned_cols=170  Identities=18%  Similarity=0.238  Sum_probs=125.8

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCCeE--EEEEeCCC-cCeE
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKC--VLQYSGHS-GSVN  226 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~~~--~~~~~~h~-~~v~  226 (360)
                      ..+-...-+..|.+..  ++.+..|.+|...++.+.|..  ....+.+|+.||+|++||+++...  ...+.++. .+..
T Consensus        44 av~lSngsv~lyd~~t--g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~  121 (376)
T KOG1188|consen   44 AVSLSNGSVRLYDKGT--GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFI  121 (376)
T ss_pred             EEEecCCeEEEEeccc--hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcce
Confidence            3344455556666654  889999999999999999876  345899999999999999997643  34455565 4566


Q ss_pred             EEEEeeCCCEEEEEeC----CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeE-eeCCCCcEEEEEEc
Q psy11015        227 SVRFLPNKDLVLSASG----DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWL  301 (360)
Q Consensus       227 ~i~~~p~~~~l~s~s~----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~s  301 (360)
                      +++.+-.++.+++|..    |-.+.+||++....                           ++.. ...|...|+++.|+
T Consensus       122 ~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq---------------------------~l~~~~eSH~DDVT~lrFH  174 (376)
T KOG1188|consen  122 CLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQ---------------------------LLRQLNESHNDDVTQLRFH  174 (376)
T ss_pred             EeeccCcCCeEEeccccccCceEEEEEEeccccc---------------------------hhhhhhhhccCcceeEEec
Confidence            7777667778887743    56789999986522                           1222 34799999999999


Q ss_pred             CC-CCEEEEEECCCcEEEEECCCCe---EEEEEecCCCceEEEEEcCCC--CEEE
Q psy11015        302 SD-GEQVITASWDRVANLFDVETGT---ILQSLTEPGEAIRAAAGRTGG--PIRA  350 (360)
Q Consensus       302 p~-g~~l~tgs~dg~i~iwd~~~~~---~~~~l~~h~~~v~~~~~~~~g--~~la  350 (360)
                      |. .+.|+|||.||-+.+||+..-.   .+.....|..+|.++.|+.++  ++.+
T Consensus       175 P~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~c  229 (376)
T KOG1188|consen  175 PSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMC  229 (376)
T ss_pred             CCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEE
Confidence            95 5689999999999999987432   222333477889999999887  6554

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.52  E-value=3.5e-12  Score=118.27  Aligned_cols=155  Identities=29%  Similarity=0.497  Sum_probs=130.6

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVH  247 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~  247 (360)
                      ......+.+|...|.+++|+|++..+++++. |+.+++|++..+..+..+.+|...|.+++|+|++. .+++++.|+.++
T Consensus       145 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~  224 (466)
T COG2319         145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR  224 (466)
T ss_pred             CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEE
Confidence            5777889999999999999999998888886 99999999999999999999999999999999998 555569999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccccee-EeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVK-ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  326 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~  326 (360)
                      +||...+.                            ... .+.+|...+ ...|+|++..+++++.|+.+++|+......
T Consensus       225 ~wd~~~~~----------------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  275 (466)
T COG2319         225 LWDLSTGK----------------------------LLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS  275 (466)
T ss_pred             EEECCCCc----------------------------EEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc
Confidence            99876441                            233 566777765 448999998999999999999999987664


Q ss_pred             -EEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        327 -LQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       327 -~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                       +..+..|...|.++.|+|++..++++.
T Consensus       276 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~  303 (466)
T COG2319         276 LLRTLSGHSSSVLSVAFSPDGKLLASGS  303 (466)
T ss_pred             EEEEEecCCccEEEEEECCCCCEEEEee
Confidence             555567889999999999777766644

>KOG1007|consensus

Probab=99.52  E-value=1.3e-13  Score=115.75  Aligned_cols=158  Identities=17%  Similarity=0.139  Sum_probs=121.7

Q ss_pred             eeeeeeee-cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEEEe-----CCCcCeEEEEEee--CCCEEEEE
Q psy11015        170 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-VLQYS-----GHSGSVNSVRFLP--NKDLVLSA  240 (360)
Q Consensus       170 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~-~~~~~-----~h~~~v~~i~~~p--~~~~l~s~  240 (360)
                      ..++..+. .|-+.|.|+.|.|++..+++-. |..|.+|++..+.. +..+.     +|....++-+|+|  +|+.+++ 
T Consensus       112 lE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t-  189 (370)
T KOG1007|consen  112 LECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT-  189 (370)
T ss_pred             hhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE-
Confidence            45555665 5677999999999998888766 88999999987754 33332     3556678889998  6777665 


Q ss_pred             eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEECCCcEEEE
Q psy11015        241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLF  319 (360)
Q Consensus       241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~dg~i~iw  319 (360)
                      ..|+++..||+++..+..                           ..-..|...|..+.|+|+-. +|+||+.||.|+||
T Consensus       190 t~d~tl~~~D~RT~~~~~---------------------------sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriW  242 (370)
T KOG1007|consen  190 TSDSTLQFWDLRTMKKNN---------------------------SIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIW  242 (370)
T ss_pred             eCCCcEEEEEccchhhhc---------------------------chhhhhcceeeeccCCCCceEEEEEcCCCccEEEE
Confidence            578999999998763322                           22236888899999999876 57899999999999


Q ss_pred             ECCC-CeEEEEEecCCCceEEEEEcCC--CCEEEcccccc
Q psy11015        320 DVET-GTILQSLTEPGEAIRAAAGRTG--GPIRASPLLLA  356 (360)
Q Consensus       320 d~~~-~~~~~~l~~h~~~v~~~~~~~~--g~~las~~~~~  356 (360)
                      |++. ..+++++.+|...|+++.|+|.  ..++.+++|..
T Consensus       243 D~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~  282 (370)
T KOG1007|consen  243 DTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSA  282 (370)
T ss_pred             eccCCCccccccCCCceEEEEEEecCccceEEEecCCCce
Confidence            9985 5578999999999999999984  44555666654

>KOG0321|consensus

Probab=99.52  E-value=2.6e-13  Score=124.81  Aligned_cols=195  Identities=16%  Similarity=0.244  Sum_probs=125.1

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCe---------------------------E
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGK---------------------------C  214 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~---------------------------~  214 (360)
                      |........-.+.+.||++.|.+++|.|..+ .|++|+.||.|.|||++-..                           .
T Consensus       127 Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr  206 (720)
T KOG0321|consen  127 WDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKR  206 (720)
T ss_pred             eeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcc
Confidence            4333333333445899999999999999765 89999999999999986221                           1


Q ss_pred             EEEEeCCCcCeEE---EEEeeCCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCC-------------------
Q psy11015        215 VLQYSGHSGSVNS---VRFLPNKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDES-------------------  271 (360)
Q Consensus       215 ~~~~~~h~~~v~~---i~~~p~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~-------------------  271 (360)
                      +.....+...|.+   +.+..|...|+++|. |+.|+|||+++..................                   
T Consensus       207 ~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L  286 (720)
T KOG0321|consen  207 IRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYL  286 (720)
T ss_pred             ccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeE
Confidence            1222334444554   555568889999887 99999999998765443222211111100                   


Q ss_pred             -CCCCCCcccc-------ccceeEeeCCCCc--EEEEEEcCCCCEEEEEECCCcEEEEECCCCe-EEEEEecCCCceEEE
Q psy11015        272 -KEPDESSITL-------RTPVKELLGHSNV--VIAADWLSDGEQVITASWDRVANLFDVETGT-ILQSLTEPGEAIRAA  340 (360)
Q Consensus       272 -~~~~~~~~~~-------~~~~~~~~~h~~~--v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~-~~~~l~~h~~~v~~~  340 (360)
                       ....+..+..       ..++..+.++...  -..-..+|++.++++|++|....+|.+.+.+ ....+.+|.-.|+++
T Consensus       287 ~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V  366 (720)
T KOG0321|consen  287 FASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTV  366 (720)
T ss_pred             EEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEE
Confidence             0001111111       1234444444221  1122358899999999999999999998765 345678899999999


Q ss_pred             EEcC--CCCEEEcccccch
Q psy11015        341 AGRT--GGPIRASPLLLAI  357 (360)
Q Consensus       341 ~~~~--~g~~las~~~~~i  357 (360)
                      +|.|  .+.+++++-|..+
T Consensus       367 ~w~pS~~t~v~TcSdD~~~  385 (720)
T KOG0321|consen  367 RWLPSATTPVATCSDDFRV  385 (720)
T ss_pred             eeccccCCCceeeccCcce
Confidence            9966  5677777656543

>KOG1538|consensus

Probab=99.51  E-value=1.2e-12  Score=121.07  Aligned_cols=193  Identities=15%  Similarity=0.173  Sum_probs=135.2

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--------eEEEEE----------------
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--------KCVLQY----------------  218 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--------~~~~~~----------------  218 (360)
                      +..+...|..+.+++||.+.|+|++|+.+|..++||++|+.|.+|+..-.        ..++..                
T Consensus        36 liyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsd  115 (1081)
T KOG1538|consen   36 LVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSD  115 (1081)
T ss_pred             EEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhh
Confidence            44455678899999999999999999999999999999999999986521        111111                


Q ss_pred             -----------eC--CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCC---CCCC-----
Q psy11015        219 -----------SG--HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKE---PDES-----  277 (360)
Q Consensus       219 -----------~~--h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----  277 (360)
                                 ..  ....+.+++|..||++++-|-.||+|.+-+ .++++...+..++++....+..   +...     
T Consensus       116 FglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRN-k~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~d  194 (1081)
T KOG1538|consen  116 FGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRN-KNGEEKVKIERPGGSNSPIWSICWNPSSGEGRND  194 (1081)
T ss_pred             ccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeec-CCCCcceEEeCCCCCCCCceEEEecCCCCCCccc
Confidence                       00  224577888999999999999999998875 4455555555544443332211   1000     


Q ss_pred             --ccccccceeEe---e----CC----CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcC
Q psy11015        278 --SITLRTPVKEL---L----GH----SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT  344 (360)
Q Consensus       278 --~~~~~~~~~~~---~----~h----~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~  344 (360)
                        ....|.....+   .    +.    .-...++.+.|+|.+++.|+.|+.+++|. +.|-.+.++......|+.++.+|
T Consensus       195 i~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~P  273 (1081)
T KOG1538|consen  195 ILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKP  273 (1081)
T ss_pred             eEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEcc
Confidence              01112111111   1    11    11346788899999999999999999998 66888888877888999999999


Q ss_pred             CCCEEEccc-ccch
Q psy11015        345 GGPIRASPL-LLAI  357 (360)
Q Consensus       345 ~g~~las~~-~~~i  357 (360)
                      +++.++-|- |++|
T Consensus       274 NsQ~v~~GCqDGTi  287 (1081)
T KOG1538|consen  274 NSQYVVVGCQDGTI  287 (1081)
T ss_pred             CCceEEEEEccCee
Confidence            999777553 4443

>KOG1408|consensus

Probab=99.50  E-value=3.6e-13  Score=125.38  Aligned_cols=159  Identities=16%  Similarity=0.171  Sum_probs=127.4

Q ss_pred             eeeeeeeecCCCCEEEEEECCCC--CEEEEEeCCCcEEEEECCCCeEEEEEeCC-----CcCeEEEEEeeCCCEEEEEeC
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQ--PVLGSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNSVRFLPNKDLVLSASG  242 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~--~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h-----~~~v~~i~~~p~~~~l~s~s~  242 (360)
                      ..++.++.+|...|+++.|-..|  ..++++|+|+.|.+--.....-...+..|     ...+++++..|...++++++.
T Consensus       537 y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQ  616 (1080)
T KOG1408|consen  537 YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQ  616 (1080)
T ss_pred             cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEec
Confidence            35678889999999999998776  58999999998865433321111222222     246899999999999999999


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      |+.|+|||+..++....                         ...-.+|.+....+...|.|.|++|.+.|+++.++|+-
T Consensus       617 Drnirif~i~sgKq~k~-------------------------FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~  671 (1080)
T KOG1408|consen  617 DRNIRIFDIESGKQVKS-------------------------FKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFV  671 (1080)
T ss_pred             ccceEEEeccccceeee-------------------------ecccccCCCceEEEEECCCccEEEEeecCCceEEEEec
Confidence            99999999998843321                         22223577778888999999999999999999999999


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +|+++..+.+|...|+.+.|.+|.+.+.+.+
T Consensus       672 sgEcvA~m~GHsE~VTG~kF~nDCkHlISvs  702 (1080)
T KOG1408|consen  672 SGECVAQMTGHSEAVTGVKFLNDCKHLISVS  702 (1080)
T ss_pred             cchhhhhhcCcchheeeeeecccchhheeec
Confidence            9999999999999999999999988776655

>KOG4378|consensus

Probab=99.50  E-value=1.1e-12  Score=117.46  Aligned_cols=149  Identities=17%  Similarity=0.217  Sum_probs=118.1

Q ss_pred             ceeeeeeeecC-CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEE-eCCCcCeEEEEEeeCC-CEEEEEeCCC
Q psy11015        169 SCYKIRSFSGH-RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNK-DLVLSASGDK  244 (360)
Q Consensus       169 ~~~~~~~l~~h-~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~-~~h~~~v~~i~~~p~~-~~l~s~s~d~  244 (360)
                      ++....+|... ...|.-+.|+|..+ +|.++|.+|.|.+||+....+...+ ..|..+...|+|+|.. .+|++.+.|+
T Consensus       152 t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dk  231 (673)
T KOG4378|consen  152 TKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDK  231 (673)
T ss_pred             cCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccc
Confidence            33444445443 34566889999876 6888999999999999877666554 5799999999999965 5788999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC-
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET-  323 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~-  323 (360)
                      .|.+||......                            ...+ ....+..+++|+++|.+|+.|+..|.|..||++. 
T Consensus       232 ki~~yD~~s~~s----------------------------~~~l-~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~  282 (673)
T KOG4378|consen  232 KINIYDIRSQAS----------------------------TDRL-TYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRST  282 (673)
T ss_pred             eEEEeecccccc----------------------------ccee-eecCCcceeeecCCceEEEeecCCceEEEEecccC
Confidence            999999875421                            1222 2345788999999999999999999999999985 


Q ss_pred             CeEEEEEecCCCceEEEEEcCCC
Q psy11015        324 GTILQSLTEPGEAIRAAAGRTGG  346 (360)
Q Consensus       324 ~~~~~~l~~h~~~v~~~~~~~~g  346 (360)
                      ..++.++..|...|++++|-|.-
T Consensus       283 k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  283 KAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             CCCceEeeecccceeEEEeeecc
Confidence            45788999999999999997765

>KOG2106|consensus

Probab=99.49  E-value=2.8e-12  Score=115.15  Aligned_cols=166  Identities=19%  Similarity=0.223  Sum_probs=128.6

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE------------------
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC------------------  214 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~------------------  214 (360)
                      .|..+..+.+|..  ..++..+...+|.+.|.+++.-.+| .|+||+.|+.|..||-.-.+.                  
T Consensus       262 TgDS~G~i~Iw~~--~~~~~~k~~~aH~ggv~~L~~lr~G-tllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~  338 (626)
T KOG2106|consen  262 TGDSGGNILIWSK--GTNRISKQVHAHDGGVFSLCMLRDG-TLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEG  338 (626)
T ss_pred             eecCCceEEEEeC--CCceEEeEeeecCCceEEEEEecCc-cEeecCccceEEeccccccccccccCchhcCCeeEEecC
Confidence            4555556655555  5566667777999999999999888 455699999999998321100                  


Q ss_pred             ----------------------EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCC
Q psy11015        215 ----------------------VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESK  272 (360)
Q Consensus       215 ----------------------~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~  272 (360)
                                            ....++|....+.++.+|+.+++++++.|+.+++|+-..                   
T Consensus       339 ~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k-------------------  399 (626)
T KOG2106|consen  339 KGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHK-------------------  399 (626)
T ss_pred             CCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEccCCc-------------------
Confidence                                  012357888999999999999999999999999998211                   


Q ss_pred             CCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        273 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                                 +..+. .-..++.++.|+|.| .++.|+..|...+.|.++...+..-.. ..++++++|+|+|.++|-+
T Consensus       400 -----------~~wt~-~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvg  465 (626)
T KOG2106|consen  400 -----------LEWTK-IIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVG  465 (626)
T ss_pred             -----------eeEEE-EecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEe
Confidence                       11111 134678899999999 999999999999999999666655554 8899999999999999987


Q ss_pred             cc
Q psy11015        353 LL  354 (360)
Q Consensus       353 ~~  354 (360)
                      +-
T Consensus       466 s~  467 (626)
T KOG2106|consen  466 SH  467 (626)
T ss_pred             cC
Confidence            73

>KOG1445|consensus

Probab=99.49  E-value=2e-13  Score=125.49  Aligned_cols=158  Identities=24%  Similarity=0.348  Sum_probs=125.0

Q ss_pred             ceeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeE------EEEEeCCCcCeEEEEEeeCCCEEEEEe
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKC------VLQYSGHSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~------~~~~~~h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      ..+.+..+.+|.+.|+++.|+|- ..+|+|||.|..|+||.+..|..      -..+.+..-.|.++.|+|..+-|+..+
T Consensus        68 ~~r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~  147 (1012)
T KOG1445|consen   68 RTRDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASG  147 (1012)
T ss_pred             cccccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEec
Confidence            33467778999999999999994 44999999999999999985521      122333445689999999887777778


Q ss_pred             CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        242 GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      ..|+++|||+.++                            +....+.+|...|.++.|+.||..++|++.|+.|+|||.
T Consensus       148 a~g~v~i~D~stq----------------------------k~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDP  199 (1012)
T KOG1445|consen  148 AHGSVYITDISTQ----------------------------KTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDP  199 (1012)
T ss_pred             cCceEEEEEcccC----------------------------ceeecccCCchhhhccccccCCceEeeecCCcceEEeCC
Confidence            8899999999877                            456778899999999999999999999999999999998


Q ss_pred             CC-CeEEEEEecCCCc-eEEEEEcCCC-CEEEcccc
Q psy11015        322 ET-GTILQSLTEPGEA-IRAAAGRTGG-PIRASPLL  354 (360)
Q Consensus       322 ~~-~~~~~~l~~h~~~-v~~~~~~~~g-~~las~~~  354 (360)
                      +. +..+++..+|.+. =..+.|..+- +++.|+.+
T Consensus       200 Ra~~~piQ~te~H~~~rdsRv~w~Gn~~rlisTGF~  235 (1012)
T KOG1445|consen  200 RASMEPIQTTEGHGGMRDSRVLWAGNWERLISTGFT  235 (1012)
T ss_pred             ccCCCccccccccccchhheeeeccchhhhhhcccc
Confidence            84 6788888888653 2346776554 34444443

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.49  E-value=2.1e-12  Score=115.50  Aligned_cols=131  Identities=15%  Similarity=0.150  Sum_probs=103.2

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015        193 PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWECLVSNNDNDSDLDES  271 (360)
Q Consensus       193 ~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  271 (360)
                      ..++|++.|+.|++||+.+++++..+.++. .+.+++|+|++..+ ++++.++.|++||+.++..               
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~---------------   65 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEV---------------   65 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcE---------------
Confidence            478899999999999999999999888654 46789999999876 5677889999999886622               


Q ss_pred             CCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEE
Q psy11015        272 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~la  350 (360)
                                   ...+..+. .+..++|+|+|+.++++ +.|+.+++||+.+++.+..+.. ...+.+++|+|+|.+++
T Consensus        66 -------------~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~  130 (300)
T TIGR03866        66 -------------IGTLPSGP-DPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVV  130 (300)
T ss_pred             -------------EEeccCCC-CccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEE
Confidence                         22233332 24678999999987654 5689999999999888877763 34568899999999888


Q ss_pred             cccc
Q psy11015        351 SPLL  354 (360)
Q Consensus       351 s~~~  354 (360)
                      ++..
T Consensus       131 ~~~~  134 (300)
T TIGR03866       131 NTSE  134 (300)
T ss_pred             EEec
Confidence            7654

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0650|consensus

Probab=99.48  E-value=3.5e-13  Score=123.11  Aligned_cols=152  Identities=21%  Similarity=0.170  Sum_probs=128.1

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      -.+.|.++.|+|...+|+.++. ..|+|||+.....++.+......|.+++.+|.|..|+.|+.|+.++.+|+.-+    
T Consensus       565 skG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldls----  639 (733)
T KOG0650|consen  565 SKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLS----  639 (733)
T ss_pred             cCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccC----
Confidence            4577999999999998888876 48999999988888887777888999999999999999999999999998744    


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC------C---CeEEEE
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE------T---GTILQS  329 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~------~---~~~~~~  329 (360)
                                             .++.+++.-|...+++++|++.-.++++|+.||++.|+--.      .   --+++.
T Consensus       640 -----------------------skPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~  696 (733)
T KOG0650|consen  640 -----------------------SKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKR  696 (733)
T ss_pred             -----------------------cchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeee
Confidence                                   24677888899999999999999999999999999998532      1   134667


Q ss_pred             EecCCCc----eEEEEEcCCCCEEEccc-ccchh
Q psy11015        330 LTEPGEA----IRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       330 l~~h~~~----v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +.+|...    |.++.|||...|++|+. +++||
T Consensus       697 L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tir  730 (733)
T KOG0650|consen  697 LRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIR  730 (733)
T ss_pred             ccCceeecccceEeecccCCCceEEecCCCceEE
Confidence            7888654    89999999999988776 55776

>KOG2110|consensus

Probab=99.45  E-value=2.2e-11  Score=105.64  Aligned_cols=144  Identities=14%  Similarity=0.132  Sum_probs=115.3

Q ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC---CCcCeEEEEEeeCCCEEEEE-e-CCCcEEEEEcccCe
Q psy11015        181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG---HSGSVNSVRFLPNKDLVLSA-S-GDKSVHIWQAVINW  255 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~---h~~~v~~i~~~p~~~~l~s~-s-~d~~i~vwd~~~~~  255 (360)
                      ..|.+|.++.+  .|+.+=.+ .|.|||+++-++++++..   +...+.++.+++.+.+++-- + ..|.|.|||+.+- 
T Consensus        88 t~IL~VrmNr~--RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl-  163 (391)
T KOG2110|consen   88 TSILAVRMNRK--RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINL-  163 (391)
T ss_pred             CceEEEEEccc--eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccc-
Confidence            46888888754  55555544 499999999998888763   44457777777777787653 2 3578999998654 


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCc-EEEEECCCCeEEEEEecC-
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV-ANLFDVETGTILQSLTEP-  333 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~-i~iwd~~~~~~~~~l~~h-  333 (360)
                                                 +++..+..|.+.+.+++|+++|.+|||+|..|+ |||+.+.+|+.+.+|+.. 
T Consensus       164 ---------------------------~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~  216 (391)
T KOG2110|consen  164 ---------------------------QPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGT  216 (391)
T ss_pred             ---------------------------eeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCc
Confidence                                       567788899999999999999999999999998 799999999999999754 


Q ss_pred             -CCceEEEEEcCCCCEEEccccc
Q psy11015        334 -GEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       334 -~~~v~~~~~~~~g~~las~~~~  355 (360)
                       ...|.+++|+|++++|+.++..
T Consensus       217 ~~~~IySL~Fs~ds~~L~~sS~T  239 (391)
T KOG2110|consen  217 YPVSIYSLSFSPDSQFLAASSNT  239 (391)
T ss_pred             eeeEEEEEEECCCCCeEEEecCC
Confidence             3478899999999998876653

>KOG0649|consensus

Probab=99.45  E-value=5.8e-12  Score=103.50  Aligned_cols=142  Identities=13%  Similarity=0.116  Sum_probs=106.9

Q ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      -.|++|...|..+-+++++.|+.+.-||+++|+..++|+||+..|.++.--.....+++|+.||++++||.+++..+..+
T Consensus       115 PeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~i  194 (325)
T KOG0649|consen  115 PEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMI  194 (325)
T ss_pred             CccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEe
Confidence            35899999999988888889999999999999999999999999999998555567999999999999999998665432


Q ss_pred             CCCCCCCCCCCCCCCCCccccccceeEeeCCC-CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEE
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA  339 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~  339 (360)
                      ..-                   .....+..|. ..|-+++-  +..++++|+ ...+.+|.++..++..++.. ..++..
T Consensus       195 e~y-------------------k~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse~t~vfpi-pa~v~~  251 (325)
T KOG0649|consen  195 EPY-------------------KNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSESTCVFPI-PARVHL  251 (325)
T ss_pred             ccc-------------------cChhhcCcccCceeEEEec--cCceEEecC-CCceeEEeccCCCceEEEec-ccceeE
Confidence            111                   1112233333 35666665  556787766 46788999998888777753 345666


Q ss_pred             EEEcCC
Q psy11015        340 AAGRTG  345 (360)
Q Consensus       340 ~~~~~~  345 (360)
                      +.|..+
T Consensus       252 v~F~~d  257 (325)
T KOG0649|consen  252 VDFVDD  257 (325)
T ss_pred             eeeecc
Confidence            666544

>KOG2096|consensus

Probab=99.44  E-value=2.7e-12  Score=109.27  Aligned_cols=150  Identities=19%  Similarity=0.341  Sum_probs=107.6

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC---CC-----eEEEEEeCCCcCeEEEEEeeCCCEEEEEe
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---TG-----KCVLQYSGHSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~---~~-----~~~~~~~~h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      |+.+.++......-+..+++|+|+++++++...-|+||.+-   .|     ..+..++||.+.|..++|+|+...+++.|
T Consensus       218 Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvS  297 (420)
T KOG2096|consen  218 GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVS  297 (420)
T ss_pred             CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEe
Confidence            78888888888888889999999999999999999999874   22     35678899999999999999999999999


Q ss_pred             CCCcEEEEEcccCeeEeeeCCC-----------CCCCCCCCCCCCCC--ccccccceeEe------------eCCCCcEE
Q psy11015        242 GDKSVHIWQAVINWECLVSNND-----------NDSDLDESKEPDES--SITLRTPVKEL------------LGHSNVVI  296 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~~------------~~h~~~v~  296 (360)
                      .||++++||..-.+..-+....           ...+......++..  ....+..++.+            ..|...|.
T Consensus       298 kDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is  377 (420)
T KOG2096|consen  298 KDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTTIS  377 (420)
T ss_pred             cCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCcee
Confidence            9999999998654332211000           11111111111111  11112222222            14788999


Q ss_pred             EEEEcCCCCEEEEEECCCcEEEEE
Q psy11015        297 AADWLSDGEQVITASWDRVANLFD  320 (360)
Q Consensus       297 ~i~~sp~g~~l~tgs~dg~i~iwd  320 (360)
                      +++|+++|++++|++ |+.++++.
T Consensus       378 ~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  378 SISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             eEEecCCCcEEeeec-ceeeeeec
Confidence            999999999999987 57787775

>KOG2394|consensus

Probab=99.43  E-value=3.7e-13  Score=121.58  Aligned_cols=83  Identities=16%  Similarity=0.263  Sum_probs=73.3

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      ++..+.--++.|...+|+|||.+||+.|.||.+||||..+.+.+..++..-+...|++|+|||++|++|+.|-.|.||-+
T Consensus       282 Pv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf  361 (636)
T KOG2394|consen  282 PVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSF  361 (636)
T ss_pred             ccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEe
Confidence            34444445668999999999999999999999999999998888887777789999999999999999999999999988


Q ss_pred             ccC
Q psy11015        252 VIN  254 (360)
Q Consensus       252 ~~~  254 (360)
                      ...
T Consensus       362 ~er  364 (636)
T KOG2394|consen  362 EER  364 (636)
T ss_pred             ccc
Confidence            755

>KOG1188|consensus

Probab=99.42  E-value=1.8e-12  Score=111.13  Aligned_cols=138  Identities=20%  Similarity=0.279  Sum_probs=110.4

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee--CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC
Q psy11015        193 PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE  270 (360)
Q Consensus       193 ~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~  270 (360)
                      ..++++-..|+|++||..+++.+..++++.+.++.+.|..  .+..+.+|+.||+|++||++...+.             
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~-------------  107 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAES-------------  107 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhh-------------
Confidence            4788888999999999999999999999999999999987  4578999999999999999876433             


Q ss_pred             CCCCCCCccccccceeEeeCCC-CcEEEEEEcCCCCEEEEEE----CCCcEEEEECCCCeE-EEEE-ecCCCceEEEEEc
Q psy11015        271 SKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITAS----WDRVANLFDVETGTI-LQSL-TEPGEAIRAAAGR  343 (360)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~sp~g~~l~tgs----~dg~i~iwd~~~~~~-~~~l-~~h~~~v~~~~~~  343 (360)
                                   +......|+ .+..+++.+..++.+++|+    .|-.|.+||++..+. +..+ ..|...|+++.|+
T Consensus       108 -------------a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFH  174 (376)
T KOG1188|consen  108 -------------ARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFH  174 (376)
T ss_pred             -------------hheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEec
Confidence                         233444454 4566777766777888875    367899999998776 5555 4699999999999


Q ss_pred             CCC-CEEEcccccc
Q psy11015        344 TGG-PIRASPLLLA  356 (360)
Q Consensus       344 ~~g-~~las~~~~~  356 (360)
                      |.. ++++||+-.+
T Consensus       175 P~~pnlLlSGSvDG  188 (376)
T KOG1188|consen  175 PSDPNLLLSGSVDG  188 (376)
T ss_pred             CCCCCeEEeecccc
Confidence            965 5888777433

>KOG0649|consensus

Probab=99.41  E-value=3.1e-12  Score=105.03  Aligned_cols=130  Identities=17%  Similarity=0.195  Sum_probs=102.0

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe------EEEEE--eCC-----CcCeEEEEEeeCCCEEE
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK------CVLQY--SGH-----SGSVNSVRFLPNKDLVL  238 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~------~~~~~--~~h-----~~~v~~i~~~p~~~~l~  238 (360)
                      .+..+++|.++|+.++|+.  .+|++|+. |.|+-|..+...      .+...  .-|     -..|+++-..|..+-++
T Consensus        54 ~iv~eqahdgpiy~~~f~d--~~Lls~gd-G~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~  130 (325)
T KOG0649|consen   54 KIVPEQAHDGPIYYLAFHD--DFLLSGGD-GLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSIL  130 (325)
T ss_pred             ceeeccccCCCeeeeeeeh--hheeeccC-ceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEE
Confidence            4556689999999999993  37777764 999998765321      11111  112     24588999999877777


Q ss_pred             EEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEE
Q psy11015        239 SASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANL  318 (360)
Q Consensus       239 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~i  318 (360)
                      .+++|+.++-||+.+|                            +...++.||++.|.++.-......+++|+.||++|+
T Consensus       131 ~AgGD~~~y~~dlE~G----------------------------~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRv  182 (325)
T KOG0649|consen  131 FAGGDGVIYQVDLEDG----------------------------RIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRV  182 (325)
T ss_pred             EecCCeEEEEEEecCC----------------------------EEEEEEcCCcceeeeeeecccCcceeecCCCccEEE
Confidence            7889999999999988                            346778999999999988556678999999999999


Q ss_pred             EECCCCeEEEEEec
Q psy11015        319 FDVETGTILQSLTE  332 (360)
Q Consensus       319 wd~~~~~~~~~l~~  332 (360)
                      ||+++++++..+..
T Consensus       183 Wd~kt~k~v~~ie~  196 (325)
T KOG0649|consen  183 WDTKTQKHVSMIEP  196 (325)
T ss_pred             EeccccceeEEecc
Confidence            99999999988753

>KOG1272|consensus

Probab=99.40  E-value=3.8e-13  Score=119.57  Aligned_cols=153  Identities=17%  Similarity=0.201  Sum_probs=130.1

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      .++.++.| ..|..+.|-|..-+|++++..|.++--|+.+|+.+..+....+.+..++-+|-...+-+|...|+|.+|..
T Consensus       202 ElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP  280 (545)
T KOG1272|consen  202 ELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSP  280 (545)
T ss_pred             EEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCC
Confidence            33334333 46778889998889999999999999999999999999888899999999999889999999999999975


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      ..                            ..|+..+..|.++|.++++.++|+|++|.+.|+.++|||+++...++++.
T Consensus       281 ~s----------------------------kePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~  332 (545)
T KOG1272|consen  281 NS----------------------------KEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYR  332 (545)
T ss_pred             CC----------------------------cchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceee
Confidence            43                            35677788899999999999999999999999999999999888777776


Q ss_pred             cCCCceEEEEEcCCCCEEEcccc
Q psy11015        332 EPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       332 ~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      . ..+...+++|..|.+.++-.+
T Consensus       333 t-p~~a~~ls~SqkglLA~~~G~  354 (545)
T KOG1272|consen  333 T-PHPASNLSLSQKGLLALSYGD  354 (545)
T ss_pred             c-CCCccccccccccceeeecCC
Confidence            5 456788899988887765443

>KOG1539|consensus

Probab=99.40  E-value=2.1e-11  Score=115.54  Aligned_cols=165  Identities=16%  Similarity=0.195  Sum_probs=136.3

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSV  246 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i  246 (360)
                      .+++.+.+|+++...|+++.=+|--..++.|..+|+|.++|++.++.+.+|+.-.+.|++++|..||. .+++|+..|.+
T Consensus       190 rt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m  269 (910)
T KOG1539|consen  190 RTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDM  269 (910)
T ss_pred             ccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceE
Confidence            57789999999999999999999888999999999999999999999999993359999999999997 55667777999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe-
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT-  325 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~-  325 (360)
                      .+||+......                           ......|.+.|..+.|.|....++|++.|..+++|=..++. 
T Consensus       270 ~~wDLe~kkl~---------------------------~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg  322 (910)
T KOG1539|consen  270 AFWDLEKKKLI---------------------------NVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDG  322 (910)
T ss_pred             EEEEcCCCeee---------------------------eeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCC
Confidence            99999865222                           22334788999999999999999999999999999666443 


Q ss_pred             ---EEEEEecCCCceEEEEEc-CCCCEEEcc-cccchhc
Q psy11015        326 ---ILQSLTEPGEAIRAAAGR-TGGPIRASP-LLLAIRS  359 (360)
Q Consensus       326 ---~~~~l~~h~~~v~~~~~~-~~g~~las~-~~~~ir~  359 (360)
                         .+..-.+|..+..++.|. .+|..+.++ .|.+.|+
T Consensus       323 ~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~  361 (910)
T KOG1539|consen  323 VPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRS  361 (910)
T ss_pred             cchheeeccCCCCCchheeeeccCcEEEEecccCcchhh
Confidence               345556899999999998 567655554 4666664

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.39  E-value=9e-12  Score=117.51  Aligned_cols=146  Identities=16%  Similarity=0.173  Sum_probs=103.4

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECCCCeE--EEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcE
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSV  246 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~D---g~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i  246 (360)
                      .+.+..|...+.+.+|+|+|+.|+.++.+   ..|++||+.+++.  +..+.+|   ...++|+|||+.|+.++ .+|.+
T Consensus       196 ~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~  272 (429)
T PRK01742        196 QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVL  272 (429)
T ss_pred             ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcE
Confidence            45677888899999999999988887654   3699999988753  3334443   44789999999887764 68876


Q ss_pred             EEE--EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCC
Q psy11015        247 HIW--QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVET  323 (360)
Q Consensus       247 ~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~  323 (360)
                      .||  |+.++                             ....+..+...+.+.+|+|+|+.|+.++ .+|..+||++..
T Consensus       273 ~Iy~~d~~~~-----------------------------~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~  323 (429)
T PRK01742        273 NIYVMGANGG-----------------------------TPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSA  323 (429)
T ss_pred             EEEEEECCCC-----------------------------CeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence            666  44333                             2344556666788899999999877555 578888887643


Q ss_pred             -CeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        324 -GTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       324 -~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                       +.....+ .+..  ...+|+|+|..++...
T Consensus       324 ~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~  351 (429)
T PRK01742        324 SGGGASLV-GGRG--YSAQISADGKTLVMIN  351 (429)
T ss_pred             CCCCeEEe-cCCC--CCccCCCCCCEEEEEc
Confidence             2222333 3433  4578999998876554

>KOG0290|consensus

Probab=99.39  E-value=1.9e-11  Score=102.90  Aligned_cols=178  Identities=15%  Similarity=0.140  Sum_probs=125.6

Q ss_pred             eeeecCCeEEEeeecCccceeeeeee-ecCCCCEEEEEECCCCC-----EEEEEeCCCcEEEEECCCC--e--EEEEE--
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSF-SGHRDGVWDVAVRPGQP-----VLGSASADRTVRLWSTQTG--K--CVLQY--  218 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~h~~~V~~l~~~~~~~-----~l~sgs~Dg~v~iwd~~~~--~--~~~~~--  218 (360)
                      .|.-.....+.+......++..+..- ..|.-+++.+-|.|+..     +|||++  -.+|+|.+...  +  +...+  
T Consensus        66 S~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~  143 (364)
T KOG0290|consen   66 SFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNN  143 (364)
T ss_pred             eeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhcc
Confidence            33333344444444444444433222 36888999999999763     565554  48999998742  1  11111  


Q ss_pred             ---eCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCc
Q psy11015        219 ---SGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV  294 (360)
Q Consensus       219 ---~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~  294 (360)
                         ..+.++++++.|+. +.+++.++|-|-++.|||+.++.                         .+.....+..|...
T Consensus       144 ~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~-------------------------~~~vkTQLIAHDKE  198 (364)
T KOG0290|consen  144 NKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGV-------------------------SGTVKTQLIAHDKE  198 (364)
T ss_pred             CcccccCCcccccccccCCcceeEeecccCeEEEEEEeecc-------------------------ccceeeEEEecCcc
Confidence               23667899999986 66899999999999999998761                         12235567789999


Q ss_pred             EEEEEEcCCCC-EEEEEECCCcEEEEECCCCe------------------------------------------------
Q psy11015        295 VIAADWLSDGE-QVITASWDRVANLFDVETGT------------------------------------------------  325 (360)
Q Consensus       295 v~~i~~sp~g~-~l~tgs~dg~i~iwd~~~~~------------------------------------------------  325 (360)
                      |..++|..+|. .||+.|.||.+|+||++...                                                
T Consensus       199 V~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~t  278 (364)
T KOG0290|consen  199 VYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCT  278 (364)
T ss_pred             eeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCc
Confidence            99999998664 67999999999999987321                                                


Q ss_pred             EEEEEecCCCceEEEEEcCC-CCEEEccccc
Q psy11015        326 ILQSLTEPGEAIRAAAGRTG-GPIRASPLLL  355 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~-g~~las~~~~  355 (360)
                      .+..+.+|.+.|++++|.|. ...++|+.|.
T Consensus       279 pva~L~~H~a~VNgIaWaPhS~~hictaGDD  309 (364)
T KOG0290|consen  279 PVARLRNHQASVNGIAWAPHSSSHICTAGDD  309 (364)
T ss_pred             ceehhhcCcccccceEecCCCCceeeecCCc
Confidence            13345689999999999986 4688888774

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.38  E-value=5.4e-11  Score=110.28  Aligned_cols=157  Identities=27%  Similarity=0.458  Sum_probs=131.8

Q ss_pred             eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-EEEEEeCCCc-CeEEEEE-eeCCC-EEEEEeC-CCcEEEE
Q psy11015        175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQYSGHSG-SVNSVRF-LPNKD-LVLSASG-DKSVHIW  249 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-~~~~~~~h~~-~v~~i~~-~p~~~-~l~s~s~-d~~i~vw  249 (360)
                      .+.+|...+.++.+.+.+..++.++.|+.+.+|+...+. .+..+.++.. .+..+.+ ++++. .++..+. |+.+.+|
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  139 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW  139 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence            567899999999999999999999999999999999886 7777776554 7778887 77777 5555444 9999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECCCCeEEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQ  328 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~~~~~~~  328 (360)
                      +....                           ......+..|...|..++|+|++.++++++. |+.+++|+...+..+.
T Consensus       140 ~~~~~---------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (466)
T COG2319         140 DLSTP---------------------------GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLS  192 (466)
T ss_pred             EecCC---------------------------CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEE
Confidence            98751                           1246677889999999999999999988885 9999999999989999


Q ss_pred             EEecCCCceEEEEEcCCCC-EEEc-ccccchh
Q psy11015        329 SLTEPGEAIRAAAGRTGGP-IRAS-PLLLAIR  358 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~~g~-~las-~~~~~ir  358 (360)
                      .+.+|...|.+++|+|++. ++++ +.++.|+
T Consensus       193 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~  224 (466)
T COG2319         193 TLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR  224 (466)
T ss_pred             eeccCCCceEEEEEcCCcceEEEEecCCCcEE
Confidence            9999999999999999997 6666 5566654

>KOG1538|consensus

Probab=99.37  E-value=8e-12  Score=115.76  Aligned_cols=162  Identities=20%  Similarity=0.285  Sum_probs=112.5

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      .|..++|-|||..|+.+.. ..+.+||...|..+.++++|...|++++|+.+|..+++|+.|+.|.+|.-.-.....-..
T Consensus        14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH   92 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSH   92 (1081)
T ss_pred             chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeecc
Confidence            8999999999997776654 478899999999999999999999999999999999999999999999754221111000


Q ss_pred             CC-----C-CCCCCCCCCCCCCcccccccee-Eee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe-
Q psy11015        262 ND-----N-DSDLDESKEPDESSITLRTPVK-ELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-  331 (360)
Q Consensus       262 ~~-----~-~~~~~~~~~~~~~~~~~~~~~~-~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~-  331 (360)
                      .+     . .+......+........|.+-. ...  .-...+.+++|..||.+++.|-.||+|.+-+- +|+.-..+. 
T Consensus        93 ~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~R  171 (1081)
T KOG1538|consen   93 NDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIER  171 (1081)
T ss_pred             CCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeC
Confidence            00     0 0000000111111111222111 111  12457889999999999999999999999874 455444443 


Q ss_pred             --cCCCceEEEEEcCC
Q psy11015        332 --EPGEAIRAAAGRTG  345 (360)
Q Consensus       332 --~h~~~v~~~~~~~~  345 (360)
                        +...+|++++|+|.
T Consensus       172 pgg~Nspiwsi~~~p~  187 (1081)
T KOG1538|consen  172 PGGSNSPIWSICWNPS  187 (1081)
T ss_pred             CCCCCCCceEEEecCC
Confidence              36789999999985

>KOG0307|consensus

Probab=99.37  E-value=2e-12  Score=126.34  Aligned_cols=173  Identities=17%  Similarity=0.202  Sum_probs=121.8

Q ss_pred             CCEEEEEECCCCC----EEEEEeCCCcEEEEECCC---C---eEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEE
Q psy11015        181 DGVWDVAVRPGQP----VLGSASADRTVRLWSTQT---G---KCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIW  249 (360)
Q Consensus       181 ~~V~~l~~~~~~~----~l~sgs~Dg~v~iwd~~~---~---~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vw  249 (360)
                      ..-+.++|.+.+.    +|+.|..||.|.+||...   +   ..+..+..|.|.|..+.|++... ++++|+.||.|.||
T Consensus        65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iW  144 (1049)
T KOG0307|consen   65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIW  144 (1049)
T ss_pred             ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEe
Confidence            3567888887665    499999999999999875   2   35667788999999999999755 99999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCC------------CCC-----CCCCccccccceeEeeCCCC--cEEEEEEcCCCC-EEEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDE------------SKE-----PDESSITLRTPVKELLGHSN--VVIAADWLSDGE-QVIT  309 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~------------~~~-----~~~~~~~~~~~~~~~~~h~~--~v~~i~~sp~g~-~l~t  309 (360)
                      |+...................            ...     ...++....+++-.+..|.+  .+..++|+|++- .+++
T Consensus       145 Dlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~  224 (1049)
T KOG0307|consen  145 DLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLV  224 (1049)
T ss_pred             ccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeee
Confidence            998754433332110110000            000     11223333445555555544  478899999864 5777


Q ss_pred             EECCC---cEEEEECCC-CeEEEEEecCCCceEEEEEcCCC-CEEEccc
Q psy11015        310 ASWDR---VANLFDVET-GTILQSLTEPGEAIRAAAGRTGG-PIRASPL  353 (360)
Q Consensus       310 gs~dg---~i~iwd~~~-~~~~~~l~~h~~~v~~~~~~~~g-~~las~~  353 (360)
                      ++.|.   .|.+||+|. ...++++.+|...|.++.|.+.+ .+++|+.
T Consensus       225 As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsg  273 (1049)
T KOG0307|consen  225 ASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSG  273 (1049)
T ss_pred             ecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhccc
Confidence            76653   599999985 45678889999999999999877 5655554

>KOG2110|consensus

Probab=99.37  E-value=2.6e-11  Score=105.17  Aligned_cols=130  Identities=14%  Similarity=0.222  Sum_probs=105.4

Q ss_pred             Cccceeeeeeee---cCCCCEEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE
Q psy11015        166 SLLSCYKIRSFS---GHRDGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA  240 (360)
Q Consensus       166 ~~~~~~~~~~l~---~h~~~V~~l~~~~~~~~l~sgs--~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~  240 (360)
                      +.....+++++.   .|..++.++++++.+.+++.-+  ..|.|.+||+.+-+.+..+..|.+.+-+++|+|+|.++||+
T Consensus       112 dI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATA  191 (391)
T KOG2110|consen  112 DIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATA  191 (391)
T ss_pred             ecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEe
Confidence            344555555553   4666788888888877887743  35889999999999999999999999999999999999999


Q ss_pred             eCCCc-EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC--CCcEEEEEEcCCCCEEEEEECCCcEE
Q psy11015        241 SGDKS-VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH--SNVVIAADWLSDGEQVITASWDRVAN  317 (360)
Q Consensus       241 s~d~~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~i~~sp~g~~l~tgs~dg~i~  317 (360)
                      |..|+ |||+.+..|.                            .+..|+..  ...|.+++|+|++.+|++.|..++|+
T Consensus       192 SeKGTVIRVf~v~~G~----------------------------kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVH  243 (391)
T KOG2110|consen  192 SEKGTVIRVFSVPEGQ----------------------------KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVH  243 (391)
T ss_pred             ccCceEEEEEEcCCcc----------------------------EeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEE
Confidence            99998 7899988773                            34445432  34688999999999999999999999


Q ss_pred             EEECCC
Q psy11015        318 LFDVET  323 (360)
Q Consensus       318 iwd~~~  323 (360)
                      +|.+..
T Consensus       244 iFKL~~  249 (391)
T KOG2110|consen  244 IFKLEK  249 (391)
T ss_pred             EEEecc
Confidence            998753

>KOG4227|consensus

Probab=99.35  E-value=1.4e-11  Score=107.49  Aligned_cols=155  Identities=13%  Similarity=0.119  Sum_probs=119.5

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC------CeEEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT------GKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~------~~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      +.+.+.+|.+.|+++.|+.++++|++|+.|..+++|+++.      .+++.... .|.+.|.|++|.....++++|+.++
T Consensus        48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~  127 (609)
T KOG4227|consen   48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG  127 (609)
T ss_pred             hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcc
Confidence            4566789999999999999999999999999999999863      35555544 3558899999999899999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      +|.+-|+.+...+..                          ..-....+.|+.+..+|..+.+++.+.+|.|.+||.+..
T Consensus       128 ~VI~HDiEt~qsi~V--------------------------~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~  181 (609)
T KOG4227|consen  128 TVIKHDIETKQSIYV--------------------------ANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDR  181 (609)
T ss_pred             eeEeeecccceeeee--------------------------ecccCcccceeecccCCCCceEEEEecCceEEEEeccCC
Confidence            999999987633221                          111122358999999999999999999999999999865


Q ss_pred             e-EEE--EEecCCCceEEEEEcCCCC-EEEcc
Q psy11015        325 T-ILQ--SLTEPGEAIRAAAGRTGGP-IRASP  352 (360)
Q Consensus       325 ~-~~~--~l~~h~~~v~~~~~~~~g~-~las~  352 (360)
                      . .+.  .+.........+-|+|..+ +++++
T Consensus       182 ~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~  213 (609)
T KOG4227|consen  182 QNPISLVLPANSGKNFYTAEFHPETPALILVN  213 (609)
T ss_pred             CCCCceeeecCCCccceeeeecCCCceeEEec
Confidence            5 222  2223345667788999765 44443

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.35  E-value=1.5e-10  Score=109.55  Aligned_cols=153  Identities=15%  Similarity=0.142  Sum_probs=112.1

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeC---CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCCc
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKS  245 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~---Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~~  245 (360)
                      +...+.+..|...+.+.+|+|+|+.|+..+.   +..|.+||+.++... .+..+.+.+.+.+|+|+|+.++ +.+.++.
T Consensus       191 g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~  269 (435)
T PRK05137        191 GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGN  269 (435)
T ss_pred             CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCC
Confidence            4445667788899999999999998887764   468999999988653 4455667788999999998764 5566665


Q ss_pred             --EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CC--cEEEEE
Q psy11015        246 --VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DR--VANLFD  320 (360)
Q Consensus       246 --i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg--~i~iwd  320 (360)
                        |.+||+.++                             ....+..+.......+|+|||++|+..+. +|  .|.+||
T Consensus       270 ~~Iy~~d~~~~-----------------------------~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d  320 (435)
T PRK05137        270 TDIYTMDLRSG-----------------------------TTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMN  320 (435)
T ss_pred             ceEEEEECCCC-----------------------------ceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEE
Confidence              666677655                             23445555566677899999999887764 33  588888


Q ss_pred             CCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        321 VETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       321 ~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +.++.. ..+..+...+....|+|+|..++...
T Consensus       321 ~~g~~~-~~lt~~~~~~~~~~~SpdG~~ia~~~  352 (435)
T PRK05137        321 ADGSNP-RRISFGGGRYSTPVWSPRGDLIAFTK  352 (435)
T ss_pred             CCCCCe-EEeecCCCcccCeEECCCCCEEEEEE
Confidence            776543 44544455677789999999887543

>KOG1963|consensus

Probab=99.35  E-value=3.7e-11  Score=114.65  Aligned_cols=161  Identities=22%  Similarity=0.290  Sum_probs=128.2

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCC---EEEEEeCCCcEEEEECCCCeEEEEEe-----------------------
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQP---VLGSASADRTVRLWSTQTGKCVLQYS-----------------------  219 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~---~l~sgs~Dg~v~iwd~~~~~~~~~~~-----------------------  219 (360)
                      ...++.+++.+.+|+.++..+.+.|...   ++++++.||.|++||...+..++++.                       
T Consensus        43 S~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~  122 (792)
T KOG1963|consen   43 STATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYV  122 (792)
T ss_pred             ecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEe
Confidence            3467888999999999999999988544   67899999999999987664432210                       


Q ss_pred             --------------------------------------------------------------------------------
Q psy11015        220 --------------------------------------------------------------------------------  219 (360)
Q Consensus       220 --------------------------------------------------------------------------------  219 (360)
                                                                                                      
T Consensus       123 s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~  202 (792)
T KOG1963|consen  123 SVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITV  202 (792)
T ss_pred             ecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhh
Confidence                                                                                            


Q ss_pred             CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEE
Q psy11015        220 GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD  299 (360)
Q Consensus       220 ~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~  299 (360)
                      .|.-.+.+.++||+++++++|..||.|.+|.--...                        ........+.-|...|.+++
T Consensus       203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~------------------------~~~~t~t~lHWH~~~V~~L~  258 (792)
T KOG1963|consen  203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSS------------------------DDSETCTLLHWHHDEVNSLS  258 (792)
T ss_pred             hhcccceeEEeccccceEEEeccCCcEEEEeccccc------------------------cccccceEEEecccccceeE
Confidence            134457889999999999999999999999632200                        00113456778999999999


Q ss_pred             EcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEc
Q psy11015        300 WLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       300 ~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las  351 (360)
                      |+++|.+|++|+..|.+.+|.+.+++ -+-+..-.++|..+.++|++.+.+.
T Consensus       259 fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl  309 (792)
T KOG1963|consen  259 FSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSL  309 (792)
T ss_pred             EecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEE
Confidence            99999999999999999999999988 4556667889999999999876553

>KOG2919|consensus

Probab=99.34  E-value=2.3e-11  Score=103.83  Aligned_cols=151  Identities=17%  Similarity=0.314  Sum_probs=120.2

Q ss_pred             CCEEEEEEC-------CCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC--Cc---CeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        181 DGVWDVAVR-------PGQPVLGSASADRTVRLWSTQTGKCVLQYSGH--SG---SVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       181 ~~V~~l~~~-------~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h--~~---~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      +.|+..+|-       |+-.++++.+.|.-|++||.-+|+....|.+.  ..   ...+++|+|||.+|++| ..+.|++
T Consensus       105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirv  183 (406)
T KOG2919|consen  105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRV  183 (406)
T ss_pred             CEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEE
Confidence            467777764       66679999999999999999999988888642  22   35699999999998865 6678999


Q ss_pred             EEc-ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeE
Q psy11015        249 WQA-VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTI  326 (360)
Q Consensus       249 wd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~  326 (360)
                      ||+ +.|..+..+.                     +..+.-.+..+-+.+++|+|-. ..++.|+....+-||.-..+.+
T Consensus       184 Fdt~RpGr~c~vy~---------------------t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~p  242 (406)
T KOG2919|consen  184 FDTSRPGRDCPVYT---------------------TVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRP  242 (406)
T ss_pred             eeccCCCCCCcchh---------------------hhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCc
Confidence            999 5554443211                     1111123456789999999954 5889999999999999888999


Q ss_pred             EEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        327 LQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       327 ~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +..+-+|.+.|+.+.|.++|+.+.+++
T Consensus       243 l~llggh~gGvThL~~~edGn~lfsGa  269 (406)
T KOG2919|consen  243 LQLLGGHGGGVTHLQWCEDGNKLFSGA  269 (406)
T ss_pred             eeeecccCCCeeeEEeccCcCeecccc
Confidence            999999999999999999999998887

>KOG2139|consensus

Probab=99.34  E-value=3.5e-11  Score=104.20  Aligned_cols=151  Identities=20%  Similarity=0.310  Sum_probs=109.3

Q ss_pred             eecCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      ..|| ..|++|.|++||..+++++. |..|+|||++++.++......-+.+.-+.|+|||.+|++++-|+.+++|+....
T Consensus       192 ~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~  270 (445)
T KOG2139|consen  192 DPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQS  270 (445)
T ss_pred             CCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhccc
Confidence            3456 78999999999999999986 468999999999877666445678899999999999999999999999975543


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC-Ce--------
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET-GT--------  325 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~-~~--------  325 (360)
                      +.                           ...-.. .++.|...+|+|+|++|+-.+. |.-++|.+.. ++        
T Consensus       271 wt---------------------------~erw~l-gsgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~~~~  321 (445)
T KOG2139|consen  271 WT---------------------------KERWIL-GSGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFLRPQ  321 (445)
T ss_pred             ce---------------------------ecceec-cCCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCCccccCcc
Confidence            22                           222222 3448999999999998765443 3344554321 00        


Q ss_pred             ------EEEEEe-----c----CCCceEEEEEcCCCCEEEcccccc
Q psy11015        326 ------ILQSLT-----E----PGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       326 ------~~~~l~-----~----h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                            .+..+.     .    ..+++.+++|+|.|.++|....+.
T Consensus       322 ~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~  367 (445)
T KOG2139|consen  322 SIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQ  367 (445)
T ss_pred             cceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCC
Confidence                  011110     1    146789999999999999876543

>KOG1240|consensus

Probab=99.32  E-value=8.4e-11  Score=115.80  Aligned_cols=179  Identities=17%  Similarity=0.092  Sum_probs=125.2

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCC-------CeEEEEEeCCCcCeEEEEEeeCCCEEEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQT-------GKCVLQYSGHSGSVNSVRFLPNKDLVLS  239 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~-------~~~~~~~~~h~~~v~~i~~~p~~~~l~s  239 (360)
                      ..|.++.++..|...|..++.++.. .+++|||.||+|++||...       .++..+|....+.+.++.+.+.++.+|.
T Consensus      1036 p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av 1115 (1431)
T KOG1240|consen 1036 PRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAV 1115 (1431)
T ss_pred             ccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEE
Confidence            5678899999999999999987765 8999999999999999863       2455666656778999999999999999


Q ss_pred             EeCCCcEEEEEcccCee------Eee-eCCCCCCCCCC--CCCCCCCc-----------ccccc-----c--eeEeeCCC
Q psy11015        240 ASGDKSVHIWQAVINWE------CLV-SNNDNDSDLDE--SKEPDESS-----------ITLRT-----P--VKELLGHS  292 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~------~~~-~~~~~~~~~~~--~~~~~~~~-----------~~~~~-----~--~~~~~~h~  292 (360)
                      ++.||.|++.++.....      +.. .+.........  .......+           ...+.     .  ........
T Consensus      1116 ~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~h 1195 (1431)
T KOG1240|consen 1116 STKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRH 1195 (1431)
T ss_pred             EcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccc
Confidence            99999999999875210      000 11111100000  00000000           00000     0  11122345


Q ss_pred             CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec-CCCceEEEEEcCCC
Q psy11015        293 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE-PGEAIRAAAGRTGG  346 (360)
Q Consensus       293 ~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~-h~~~v~~~~~~~~g  346 (360)
                      +.|++++.+|.+.++++|+..|.+-+||++-+.++..+.. +..+++.+..+|-.
T Consensus      1196 G~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~ 1250 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTY 1250 (1431)
T ss_pred             cceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccC
Confidence            7899999999999999999999999999999988877753 45677777776643

>KOG1524|consensus

Probab=99.30  E-value=5.4e-11  Score=107.82  Aligned_cols=143  Identities=10%  Similarity=0.132  Sum_probs=110.3

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      +|.+..++.....+|+|++|.|+.+.++-+-. +.+.|=.+.....+-.++.|.+-|.++.|+|..+++++|+.|...+|
T Consensus       134 sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKv  212 (737)
T KOG1524|consen  134 SGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKI  212 (737)
T ss_pred             cchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEe
Confidence            44555666677889999999998775444433 45666666666667788999999999999999999999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  328 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~  328 (360)
                      ||...                             .++..-..|..+|++++|+|+ ..++.||. .++|+=         
T Consensus       213 WD~~G-----------------------------~~Lf~S~~~ey~ITSva~npd-~~~~v~S~-nt~R~~---------  252 (737)
T KOG1524|consen  213 WDAQG-----------------------------ANLFTSAAEEYAITSVAFNPE-KDYLLWSY-NTARFS---------  252 (737)
T ss_pred             ecccC-----------------------------cccccCChhccceeeeeeccc-cceeeeee-eeeeec---------
Confidence            99643                             356666789999999999999 66666664 344411         


Q ss_pred             EEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        329 SLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                        ....++|..++|++||..++.+..
T Consensus       253 --~p~~GSifnlsWS~DGTQ~a~gt~  276 (737)
T KOG1524|consen  253 --SPRVGSIFNLSWSADGTQATCGTS  276 (737)
T ss_pred             --CCCccceEEEEEcCCCceeecccc
Confidence              224578999999999998886654

>KOG0974|consensus

Probab=99.30  E-value=2.5e-11  Score=117.69  Aligned_cols=132  Identities=20%  Similarity=0.307  Sum_probs=109.0

Q ss_pred             EEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeCCCEE
Q psy11015        159 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLV  237 (360)
Q Consensus       159 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~~~~l  237 (360)
                      -+-.|.+. ++...+ .+.||.+.|.++.++-+|.+++|.|.|+++|+|++++.+... ..-+|++.|+.++|.|.  .+
T Consensus       156 ~iivW~~~-~dn~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i  231 (967)
T KOG0974|consen  156 EIIVWKPH-EDNKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RI  231 (967)
T ss_pred             cEEEEecc-ccCCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--ee
Confidence            33345554 222222 789999999999999999999999999999999999987655 66789999999999988  89


Q ss_pred             EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC-CcEEEEEEcCCCCEEEEEECCCcE
Q psy11015        238 LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASWDRVA  316 (360)
Q Consensus       238 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~sp~g~~l~tgs~dg~i  316 (360)
                      ++++.|.+.++|+....                             .+..+.+|. ..++.++..++...++|++.||.+
T Consensus       232 ~t~gedctcrvW~~~~~-----------------------------~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~l  282 (967)
T KOG0974|consen  232 ITVGEDCTCRVWGVNGT-----------------------------QLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTL  282 (967)
T ss_pred             EEeccceEEEEEecccc-----------------------------eehhhhhhhhcceeEEEEcCCceEEEeeccCcch
Confidence            99999999999965422                             344666775 469999999988899999999999


Q ss_pred             EEEECCC
Q psy11015        317 NLFDVET  323 (360)
Q Consensus       317 ~iwd~~~  323 (360)
                      ++||...
T Consensus       283 k~~~l~~  289 (967)
T KOG0974|consen  283 KLWDLNG  289 (967)
T ss_pred             hhhhhhc
Confidence            9999753

>KOG3881|consensus

Probab=99.29  E-value=2e-10  Score=100.50  Aligned_cols=159  Identities=18%  Similarity=0.273  Sum_probs=125.8

Q ss_pred             eeeeeecCCCCEEEEEECCCCC-EEEEEeCC--CcEEEEECCCCeEEEEEeC---------CCcCeEEEEEeeC--CCEE
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQP-VLGSASAD--RTVRLWSTQTGKCVLQYSG---------HSGSVNSVRFLPN--KDLV  237 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~D--g~v~iwd~~~~~~~~~~~~---------h~~~v~~i~~~p~--~~~l  237 (360)
                      .+..+..| ..+..|.-++..+ ++++||..  ..+.|||++..+.+..-+.         -.-+++++.|-|.  ...|
T Consensus       141 ~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~f  219 (412)
T KOG3881|consen  141 KLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKF  219 (412)
T ss_pred             cceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceE
Confidence            33344333 4556666566444 67779998  8899999998754443221         1134678889877  7899


Q ss_pred             EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEE
Q psy11015        238 LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  317 (360)
Q Consensus       238 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~  317 (360)
                      ++++.-+.+++||.+.+                           .+|+..+.-...+++++...|+|+++++|..-|.+.
T Consensus       220 at~T~~hqvR~YDt~~q---------------------------RRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~  272 (412)
T KOG3881|consen  220 ATITRYHQVRLYDTRHQ---------------------------RRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLA  272 (412)
T ss_pred             EEEecceeEEEecCccc---------------------------CcceeEeccccCcceeeeecCCCcEEEEecccchhh
Confidence            99999999999999866                           457777877788999999999999999999999999


Q ss_pred             EEECCCCeEEEE-EecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        318 LFDVETGTILQS-LTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       318 iwd~~~~~~~~~-l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .||.++++.+.. +.+..++|+++..||+++++|++. |..+|
T Consensus       273 ~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvR  315 (412)
T KOG3881|consen  273 KFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVR  315 (412)
T ss_pred             eecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEE
Confidence            999999998877 888899999999999999999876 44444

>KOG0974|consensus

Probab=99.28  E-value=1.1e-10  Score=113.20  Aligned_cols=142  Identities=23%  Similarity=0.275  Sum_probs=117.3

Q ss_pred             ECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC
Q psy11015        188 VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSD  267 (360)
Q Consensus       188 ~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~  267 (360)
                      ++++.-++++|+.-+.|.+|+....+.-..+.||.+.+.++.|+-+|.++++.|.|+++++|++.+...           
T Consensus       141 ~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~-----------  209 (967)
T KOG0974|consen  141 DSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREV-----------  209 (967)
T ss_pred             ccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccc-----------
Confidence            455566899999999999999874333235889999999999999999999999999999999987622           


Q ss_pred             CCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC-CCceEEEEEcCCC
Q psy11015        268 LDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP-GEAIRAAAGRTGG  346 (360)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h-~~~v~~~~~~~~g  346 (360)
                                      ...+..+|+..|+.++|+|.  .++|++.|-+.++|+.. +..+..+.+| ...++.++.+++.
T Consensus       210 ----------------~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~  270 (967)
T KOG0974|consen  210 ----------------LGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGV  270 (967)
T ss_pred             ----------------cCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCc
Confidence                            12456789999999999987  99999999999999765 5555677777 4589999999998


Q ss_pred             CEEEccc-ccchhc
Q psy11015        347 PIRASPL-LLAIRS  359 (360)
Q Consensus       347 ~~las~~-~~~ir~  359 (360)
                      .+++|+. |+++|+
T Consensus       271 ~~~vT~g~Ds~lk~  284 (967)
T KOG0974|consen  271 IIKVTGGNDSTLKL  284 (967)
T ss_pred             eEEEeeccCcchhh
Confidence            8777766 676764

>KOG0322|consensus

Probab=99.27  E-value=2.7e-11  Score=100.74  Aligned_cols=142  Identities=20%  Similarity=0.158  Sum_probs=111.0

Q ss_pred             eeecCCeEEEeeecCcc--------ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--eE--EEEEe
Q psy11015        152 LKVQTSKIVSSFKTSLL--------SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KC--VLQYS  219 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~--------~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--~~--~~~~~  219 (360)
                      +.|..+.-+-.|..+..        .......+..|.++|.++.+.+.-..=++|+.+..+..|++...  .+  .....
T Consensus       169 laGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~  248 (323)
T KOG0322|consen  169 LAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEIT  248 (323)
T ss_pred             EEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEE
Confidence            34544554545554432        33455666789999999999887667788899999999998633  21  11222


Q ss_pred             CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEE
Q psy11015        220 GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD  299 (360)
Q Consensus       220 ~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~  299 (360)
                      -....|..+..-||++.++|++.|+.|+||..++.                            .|+..+.-|.+.|.+++
T Consensus       249 lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl----------------------------~pLAVLkyHsagvn~vA  300 (323)
T KOG0322|consen  249 LKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTL----------------------------NPLAVLKYHSAGVNAVA  300 (323)
T ss_pred             ecCCCccceEEccCCcEEeecccCCcEEEEEeccC----------------------------CchhhhhhhhcceeEEE
Confidence            23456889999999999999999999999998766                            57888889999999999


Q ss_pred             EcCCCCEEEEEECCCcEEEEEC
Q psy11015        300 WLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       300 ~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      |+|+...+|.+|.|+.|-+|++
T Consensus       301 fspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  301 FSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             eCCCCchhhhccCCceEEeeec
Confidence            9999999999999999999986

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.27  E-value=3.3e-10  Score=106.81  Aligned_cols=155  Identities=16%  Similarity=0.169  Sum_probs=105.1

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCCc
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKS  245 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D---g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~~  245 (360)
                      +...+.+..+.+.+.+.+|+|+|+.|+..+.+   ..|.+||+.+++... +....+.+.+..|+|||+.++ +.+.++.
T Consensus       185 G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~  263 (427)
T PRK02889        185 GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGN  263 (427)
T ss_pred             CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCC
Confidence            34445566788899999999999988877643   359999999886543 333445667899999998776 5677888


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEEC--C
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDV--E  322 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~--~  322 (360)
                      ..||.+...                           ......+..+...+....|+|||++|+..+. +|...||.+  .
T Consensus       264 ~~Iy~~d~~---------------------------~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~  316 (427)
T PRK02889        264 SQIYTVNAD---------------------------GSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPAS  316 (427)
T ss_pred             ceEEEEECC---------------------------CCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECC
Confidence            777765321                           0123344445555667889999999876554 466667754  4


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ++. ...+..+.......+|+|+|++++...
T Consensus       317 ~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~s  346 (427)
T PRK02889        317 GGA-AQRVTFTGSYNTSPRISPDGKLLAYIS  346 (427)
T ss_pred             CCc-eEEEecCCCCcCceEECCCCCEEEEEE
Confidence            443 233332333345678999999887543

>KOG2139|consensus

Probab=99.26  E-value=2e-10  Score=99.52  Aligned_cols=140  Identities=21%  Similarity=0.295  Sum_probs=102.3

Q ss_pred             CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC----e----------EEEEEeCCCcCeEEEEEeeCCCEEEEEeC-C
Q psy11015        180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG----K----------CVLQYSGHSGSVNSVRFLPNKDLVLSASG-D  243 (360)
Q Consensus       180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~----~----------~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d  243 (360)
                      +..|.|++|.|-+. .|+.|+. +-|.+|.....    +          .+....|| ..|+++.|++||..+++++. |
T Consensus       140 QrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gs  217 (445)
T KOG2139|consen  140 QRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGS  217 (445)
T ss_pred             hcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCc
Confidence            45799999999654 6666665 46889987531    1          12233455 57999999999999999875 5


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC-
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE-  322 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~-  322 (360)
                      ..|.|||+.++...                          ++..  -..+.++-+.|||||.+|+.++.|+..++|... 
T Consensus       218 ssi~iWdpdtg~~~--------------------------pL~~--~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q  269 (445)
T KOG2139|consen  218 SSIMIWDPDTGQKI--------------------------PLIP--KGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQ  269 (445)
T ss_pred             ceEEEEcCCCCCcc--------------------------cccc--cCCCceeeEEEcCCCCEEEEecccceeeeehhcc
Confidence            78999999887332                          2221  234578889999999999999999999999554 


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEE
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~la  350 (360)
                      +..+..-.. ..+.|...+|+|.|.++.
T Consensus       270 ~wt~erw~l-gsgrvqtacWspcGsfLL  296 (445)
T KOG2139|consen  270 SWTKERWIL-GSGRVQTACWSPCGSFLL  296 (445)
T ss_pred             cceecceec-cCCceeeeeecCCCCEEE
Confidence            333333333 345899999999998554

>KOG2111|consensus

Probab=99.26  E-value=5.4e-10  Score=95.39  Aligned_cols=151  Identities=17%  Similarity=0.195  Sum_probs=107.4

Q ss_pred             CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe-eEeeeCCCCCCCCCCCCCC------
Q psy11015        202 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW-ECLVSNNDNDSDLDESKEP------  274 (360)
Q Consensus       202 g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~------  274 (360)
                      ..|.|||=...+++.++. ..++|.+|.+.++  .+++. ..++|.||....+- ....+.....+.......+      
T Consensus        75 NkviIWDD~k~~~i~el~-f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~  150 (346)
T KOG2111|consen   75 NKVIIWDDLKERCIIELS-FNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSL  150 (346)
T ss_pred             ceEEEEecccCcEEEEEE-eccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceE
Confidence            479999977778888887 7789999999765  44443 45679999877432 2222111111111111111      


Q ss_pred             ------CCCccc-------cccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCc-EEEEECCCCeEEEEEec--CCCceE
Q psy11015        275 ------DESSIT-------LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV-ANLFDVETGTILQSLTE--PGEAIR  338 (360)
Q Consensus       275 ------~~~~~~-------~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~-i~iwd~~~~~~~~~l~~--h~~~v~  338 (360)
                            ..+..+       ...+...+..|.+.|.+++++.+|..+||+|..|+ |||||..+|..+.+++.  ....|.
T Consensus       151 LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy  230 (346)
T KOG2111|consen  151 LAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIY  230 (346)
T ss_pred             EEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEE
Confidence                  011100       01134677899999999999999999999999998 89999999999999974  356899


Q ss_pred             EEEEcCCCCEEEcccccc
Q psy11015        339 AAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       339 ~~~~~~~g~~las~~~~~  356 (360)
                      +++|+|++.++|.++|-+
T Consensus       231 ~iaFSp~~s~LavsSdKg  248 (346)
T KOG2111|consen  231 CIAFSPNSSWLAVSSDKG  248 (346)
T ss_pred             EEEeCCCccEEEEEcCCC
Confidence            999999999999988744

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.26  E-value=3e-10  Score=107.32  Aligned_cols=152  Identities=17%  Similarity=0.173  Sum_probs=106.8

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCC-
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK-  244 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D---g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~-  244 (360)
                      +...+.+..|...+.+.+|+|+|+.|+.++.+   ..|.+||+.+++... +..+.+...++.|+|+|+.++ +.+.++ 
T Consensus       193 g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~  271 (433)
T PRK04922        193 GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGN  271 (433)
T ss_pred             CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCC
Confidence            34455677788889999999999988887743   469999998886533 333455566889999998764 555555 


Q ss_pred             -cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CCc--EEEEE
Q psy11015        245 -SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRV--ANLFD  320 (360)
Q Consensus       245 -~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg~--i~iwd  320 (360)
                       .|.+||+.++.                             ...+..+.......+|+|+|++|+.++. +|.  |.++|
T Consensus       272 ~~Iy~~d~~~g~-----------------------------~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~d  322 (433)
T PRK04922        272 PEIYVMDLGSRQ-----------------------------LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVA  322 (433)
T ss_pred             ceEEEEECCCCC-----------------------------eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence             58889987662                             3334445555567899999999887764 454  66667


Q ss_pred             CCCCeEEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        321 VETGTILQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       321 ~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                      +.+++. ..+..+.......+|+|+|+.++..
T Consensus       323 l~~g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~  353 (433)
T PRK04922        323 ASGGSA-ERLTFQGNYNARASVSPDGKKIAMV  353 (433)
T ss_pred             CCCCCe-EEeecCCCCccCEEECCCCCEEEEE
Confidence            776653 3333333445578999999988754

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.25  E-value=5.8e-10  Score=105.09  Aligned_cols=149  Identities=11%  Similarity=0.128  Sum_probs=101.9

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeC---CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE-eCCC--cEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDK--SVH  247 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~---Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~-s~d~--~i~  247 (360)
                      +.+..+.+.+.+.+|+|+|+.|+..+.   +..+.+|++.+++.... ....+.+..+.|+|||+.|+.. +.++  .|.
T Consensus       192 ~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~  270 (429)
T PRK03629        192 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLY  270 (429)
T ss_pred             EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCCCEEEEEEcCCCCcEEE
Confidence            445566778999999999998876542   45799999988854332 2233345578999999977754 4454  488


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-CcEEEE--ECCCC
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-RVANLF--DVETG  324 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-g~i~iw--d~~~~  324 (360)
                      +||+.++.                             ...+..+...+...+|+|+|+.|+..+.+ |...||  |+.++
T Consensus       271 ~~d~~tg~-----------------------------~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g  321 (429)
T PRK03629        271 VMDLASGQ-----------------------------IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGG  321 (429)
T ss_pred             EEECCCCC-----------------------------EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCC
Confidence            88987652                             23344444567789999999998776654 444454  66666


Q ss_pred             eEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      .. ..+..+.......+|+|+|.+++...
T Consensus       322 ~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~  349 (429)
T PRK03629        322 AP-QRITWEGSQNQDADVSSDGKFMVMVS  349 (429)
T ss_pred             Ce-EEeecCCCCccCEEECCCCCEEEEEE
Confidence            43 44444445566789999999877543

>KOG2321|consensus

Probab=99.24  E-value=9e-11  Score=107.20  Aligned_cols=164  Identities=17%  Similarity=0.225  Sum_probs=128.5

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe------CCCc-----CeEEEEEe
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS------GHSG-----SVNSVRFL  231 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~------~h~~-----~v~~i~~~  231 (360)
                      |..+...|+.+..|....+.+++|..++-..+|++|+.||.|-.||.++...+..+.      .|.+     .|+++.|+
T Consensus       158 YRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~  237 (703)
T KOG2321|consen  158 YRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFR  237 (703)
T ss_pred             EEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEec
Confidence            555567788888888888999999999998899999999999999998776555543      2333     39999999


Q ss_pred             eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC--CEEEE
Q psy11015        232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--EQVIT  309 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g--~~l~t  309 (360)
                      .+|-.+++|..+|.+.+||+++..+..                           ..-.+..-+|..+.|.+.+  +.+++
T Consensus       238 d~gL~~aVGts~G~v~iyDLRa~~pl~---------------------------~kdh~~e~pi~~l~~~~~~~q~~v~S  290 (703)
T KOG2321|consen  238 DDGLHVAVGTSTGSVLIYDLRASKPLL---------------------------VKDHGYELPIKKLDWQDTDQQNKVVS  290 (703)
T ss_pred             CCceeEEeeccCCcEEEEEcccCCcee---------------------------ecccCCccceeeecccccCCCceEEe
Confidence            889999999999999999998763221                           1112335588999998763  44544


Q ss_pred             EECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        310 ASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      . ....++|||-.+|+....+.. ...+..+++-|++-++.+|.+.
T Consensus       291 ~-Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~  334 (703)
T KOG2321|consen  291 M-DKRILKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTANES  334 (703)
T ss_pred             c-chHHhhhcccccCCceeeccc-cCCcCceeeecCCceEEEecCC
Confidence            3 457899999999999888874 5569999999988877777654

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.24  E-value=5.7e-10  Score=105.32  Aligned_cols=147  Identities=17%  Similarity=0.188  Sum_probs=99.3

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEe-CCCcEEEE--ECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSAS-ADRTVRLW--STQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSV  246 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs-~Dg~v~iw--d~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i  246 (360)
                      ..+..+.+|.   .+++|+|+|+.|+.++ .+|.+.||  |+.++. ...+..+...+.+..|+|+|+.++.++ .++..
T Consensus       241 ~~l~~~~g~~---~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~  316 (429)
T PRK01742        241 KVVASFRGHN---GAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSP  316 (429)
T ss_pred             EEEecCCCcc---CceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCc
Confidence            3455555554   3679999999877764 68876655  666555 445666777788999999999766554 67888


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  326 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~  326 (360)
                      .||++.....                           ....+ ++..  ...+|+|+|++|+.++.++ +.+||+.++..
T Consensus       317 ~I~~~~~~~~---------------------------~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~  365 (429)
T PRK01742        317 QVYRMSASGG---------------------------GASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGST  365 (429)
T ss_pred             eEEEEECCCC---------------------------CeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCe
Confidence            9998653210                           11112 2333  3578999999998887765 55699998875


Q ss_pred             EEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        327 LQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       327 ~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ......+  ....++|+|+|.+++.++.
T Consensus       366 ~~lt~~~--~~~~~~~sPdG~~i~~~s~  391 (429)
T PRK01742        366 EVLSSTF--LDESPSISPNGIMIIYSST  391 (429)
T ss_pred             EEecCCC--CCCCceECCCCCEEEEEEc
Confidence            4322222  3356789999998887653

>KOG1517|consensus

Probab=99.22  E-value=4.2e-10  Score=109.48  Aligned_cols=183  Identities=16%  Similarity=0.160  Sum_probs=131.3

Q ss_pred             eeeeecCCeEEEeeecCcc---ceeeeeeeec-------CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q psy11015        150 NKLKVQTSKIVSSFKTSLL---SCYKIRSFSG-------HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS  219 (360)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~-------h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~  219 (360)
                      ..+.++.++.+.+|+....   ..+++.-..+       -.+.-.-+.|.....+|+++|.-..|+|||+....++..+.
T Consensus      1125 LlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP 1204 (1387)
T KOG1517|consen 1125 LLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIP 1204 (1387)
T ss_pred             heeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecc
Confidence            3456788888888887543   2334433322       22222345688776677777778999999999887777765


Q ss_pred             C-CCcCeEEEEEe-eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCc--E
Q psy11015        220 G-HSGSVNSVRFL-PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV--V  295 (360)
Q Consensus       220 ~-h~~~v~~i~~~-p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v  295 (360)
                      . ....|+++.-+ +.|+.+++|..||.|++||.+....                         ...+.....|+..  |
T Consensus      1205 ~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~-------------------------ds~v~~~R~h~~~~~I 1259 (1387)
T KOG1517|consen 1205 YGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPP-------------------------DSLVCVYREHNDVEPI 1259 (1387)
T ss_pred             cCCCccceeecccccCCceEEEeecCCceEEeecccCCc-------------------------cccceeecccCCcccc
Confidence            3 33456666654 3579999999999999999885411                         1356667788877  9


Q ss_pred             EEEEEcCCCC-EEEEEECCCcEEEEECCCCeEE--EEEecCC--C-ceEEEEEcCCCCEEEcccccch
Q psy11015        296 IAADWLSDGE-QVITASWDRVANLFDVETGTIL--QSLTEPG--E-AIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       296 ~~i~~sp~g~-~l~tgs~dg~i~iwd~~~~~~~--~~l~~h~--~-~v~~~~~~~~g~~las~~~~~i  357 (360)
                      ..+.+.+.|- .|++|+.||.|++||++.....  .++..|.  + .++++..|+..+++|+|+.+.|
T Consensus      1260 v~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~i 1327 (1387)
T KOG1517|consen 1260 VHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQLI 1327 (1387)
T ss_pred             eeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCcceE
Confidence            9999998765 4999999999999999974222  2333343  3 5999999999999999986544

>KOG2111|consensus

Probab=99.20  E-value=2.6e-09  Score=91.30  Aligned_cols=142  Identities=15%  Similarity=0.113  Sum_probs=96.9

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCc-EEEEECCCCeEEEEEeCC--CcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRT-VRLWSTQTGKCVLQYSGH--SGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~-v~iwd~~~~~~~~~~~~h--~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      -..+.+|...|.|++.+.+|..+||||..|| |||||..+|..+..+...  ...|.+++|+|+..+++++|..||+++|
T Consensus       174 p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF  253 (346)
T KOG2111|consen  174 PSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIF  253 (346)
T ss_pred             ceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEE
Confidence            4678899999999999999999999999998 799999999999998632  3469999999999999999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANL  318 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~i  318 (360)
                      .++......... ...+... ...+... ...| ....+.-..+...-++|..+.+.++..+.||+-+=
T Consensus       254 ~l~~~~~~~~~~-SSl~~~~-~~lpky~-~S~w-S~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k  318 (346)
T KOG2111|consen  254 SLRDTENTEDES-SSLSFKR-LVLPKYF-SSEW-SFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYK  318 (346)
T ss_pred             EeecCCCCcccc-ccccccc-cccchhc-ccce-eEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEE
Confidence            987542111100 0000000 0000000 0001 12233333556667788766667777777777543

>KOG1409|consensus

Probab=99.20  E-value=8.9e-11  Score=101.07  Aligned_cols=174  Identities=21%  Similarity=0.262  Sum_probs=125.1

Q ss_pred             eeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-EEEEEeCCCcCeEEE
Q psy11015        150 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQYSGHSGSVNSV  228 (360)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-~~~~~~~h~~~v~~i  228 (360)
                      ..|.|..+.-+......-..+.++.++.+|.+.|.+++|.+....|++|..|..|.+||+--.+ ....+.+|...|..+
T Consensus       167 ~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l  246 (404)
T KOG1409|consen  167 YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQAL  246 (404)
T ss_pred             EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhh
Confidence            6677777777776776677889999999999999999999999999999999999999997543 455678899999999


Q ss_pred             EEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCC----------------------------------------CCCCC
Q psy11015        229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNND----------------------------------------NDSDL  268 (360)
Q Consensus       229 ~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~----------------------------------------~~~~~  268 (360)
                      .+.+--+.+++++.||.|.+||.+.......-...                                        .+...
T Consensus       247 ~~~~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~  326 (404)
T KOG1409|consen  247 SYAQHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSN  326 (404)
T ss_pred             hhhhhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccC
Confidence            99888889999999999999998654322111100                                        00000


Q ss_pred             CCCCCCCCC------------c--cccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        269 DESKEPDES------------S--ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       269 ~~~~~~~~~------------~--~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      ......-..            .  ....+++..+..-...|+++.+-..-..|+|++.|+.|+|||++.
T Consensus       327 ~~~~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~  395 (404)
T KOG1409|consen  327 RSSYPTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS  395 (404)
T ss_pred             ccccccccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence            000000000            0  011123444433344688888877777999999999999999874

>KOG1587|consensus

Probab=99.20  E-value=3.2e-10  Score=107.54  Aligned_cols=174  Identities=17%  Similarity=0.134  Sum_probs=118.3

Q ss_pred             CCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeE--EE----EEeCCCcCeEEEEEeeCCC--EEEEEeCCCcEEEEE
Q psy11015        180 RDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKC--VL----QYSGHSGSVNSVRFLPNKD--LVLSASGDKSVHIWQ  250 (360)
Q Consensus       180 ~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~--~~----~~~~h~~~v~~i~~~p~~~--~l~s~s~d~~i~vwd  250 (360)
                      ...|+|+.|+|.. .+++.|+.+|+|.+||++.+..  ..    ....|..+++.+.|-.+..  -|+++|.||.|+.|+
T Consensus       242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~  321 (555)
T KOG1587|consen  242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWD  321 (555)
T ss_pred             CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeee
Confidence            5789999999954 4889999999999999987643  22    2235889999999976544  499999999999998


Q ss_pred             cccCeeEee-----eCCC-----------------CCCCCCCCCCCCCCcc-------------ccccceeEeeCCCCcE
Q psy11015        251 AVINWECLV-----SNND-----------------NDSDLDESKEPDESSI-------------TLRTPVKELLGHSNVV  295 (360)
Q Consensus       251 ~~~~~~~~~-----~~~~-----------------~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~h~~~v  295 (360)
                      ++.-.....     ...+                 ...+.....+.+.+..             ...+....+..|.++|
T Consensus       322 ~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v  401 (555)
T KOG1587|consen  322 TDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPV  401 (555)
T ss_pred             ccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcce
Confidence            764322111     0000                 0000000000011100             0112344566788999


Q ss_pred             EEEEEcCCCCEEEEEECCCcEEEEECC-CCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        296 IAADWLSDGEQVITASWDRVANLFDVE-TGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       296 ~~i~~sp~g~~l~tgs~dg~i~iwd~~-~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +++.++|-+..++..+.|.+++||... ...++..+..+...|++++|+|.-+-++...
T Consensus       402 ~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~  460 (555)
T KOG1587|consen  402 YAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATV  460 (555)
T ss_pred             EeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEE
Confidence            999999988877666669999999987 6667777777888899999999876444433

>KOG1272|consensus

Probab=99.19  E-value=1.7e-11  Score=109.26  Aligned_cols=160  Identities=13%  Similarity=0.139  Sum_probs=118.9

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      .+|+++..+..-.+.+..|+-+|-...+-+|...|+|.+|......++..+..|.++|.+|++.++|++++|.+.|+.++
T Consensus       239 S~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~k  318 (545)
T KOG1272|consen  239 STGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVK  318 (545)
T ss_pred             chhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeeccccccee
Confidence            56777788888889999999999988999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE-CCCCe-
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD-VETGT-  325 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd-~~~~~-  325 (360)
                      |||++.-..                            +.+... .-+...+++|..|  ++..|....+.||. .-.+. 
T Consensus       319 IWDlR~~~q----------------------------l~t~~t-p~~a~~ls~Sqkg--lLA~~~G~~v~iw~d~~~~s~  367 (545)
T KOG1272|consen  319 IWDLRNFYQ----------------------------LHTYRT-PHPASNLSLSQKG--LLALSYGDHVQIWKDALKGSG  367 (545)
T ss_pred             Eeeeccccc----------------------------cceeec-CCCcccccccccc--ceeeecCCeeeeehhhhcCCC
Confidence            999986532                            222221 2345667777555  44456667789994 22211 


Q ss_pred             -EEEEEec--CCCceEEEEEcCCCCEEEcccccchh
Q psy11015        326 -ILQSLTE--PGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       326 -~~~~l~~--h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                       .-...-.  ..++|..+.|.|-..+|.-+-.++|.
T Consensus       368 ~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~t  403 (545)
T KOG1272|consen  368 HGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGIT  403 (545)
T ss_pred             CCCcchhhhccCcccccceeccHHHeeeccccCCce
Confidence             1111111  24478888888877766655555443

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.19  E-value=1.4e-09  Score=102.44  Aligned_cols=152  Identities=16%  Similarity=0.182  Sum_probs=107.6

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCC--c
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK--S  245 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D---g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~--~  245 (360)
                      ..+.+..+...+.+.+|+|+|+.|+.++.+   ..|++||+.+++... +..+.+.+.+++|+|+|+.|+ +.+.++  .
T Consensus       181 ~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~  259 (417)
T TIGR02800       181 NPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPD  259 (417)
T ss_pred             CCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCcc
Confidence            345566777789999999999988887654   479999999886543 334556677899999998665 445444  5


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-C--cEEEEECC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-R--VANLFDVE  322 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-g--~i~iwd~~  322 (360)
                      |.+||+.++.                             ...+..+........|+|+|++|+..+.. |  .|.+||+.
T Consensus       260 i~~~d~~~~~-----------------------------~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~  310 (417)
T TIGR02800       260 IYVMDLDGKQ-----------------------------LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD  310 (417)
T ss_pred             EEEEECCCCC-----------------------------EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECC
Confidence            8888877652                             22333344445567899999998766543 3  57888887


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      +++. ..+..+...+...+|+|+|.+++.+..
T Consensus       311 ~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~  341 (417)
T TIGR02800       311 GGEV-RRLTFRGGYNASPSWSPDGDLIAFVHR  341 (417)
T ss_pred             CCCE-EEeecCCCCccCeEECCCCCEEEEEEc
Confidence            7664 445545566788899999987776543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG3881|consensus

Probab=99.18  E-value=2.6e-10  Score=99.72  Aligned_cols=138  Identities=14%  Similarity=0.159  Sum_probs=115.4

Q ss_pred             EEEEEECCC--CCEEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        183 VWDVAVRPG--QPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       183 V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      ++++.|-+.  ...|++++.-+.||+||.+.+ +++.++.-...+++++...|.|+++++|..-+.+..||++.+..   
T Consensus       205 ~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl---  281 (412)
T KOG3881|consen  205 ITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKL---  281 (412)
T ss_pred             eccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCcee---
Confidence            456678877  679999999999999999876 68888888888999999999999999999999999999997732   


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEE
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA  339 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~  339 (360)
                                              ....+.+..+.|+++..+|.+++++++|.|+.|||+|+.+.+.++..- -...+++
T Consensus       282 ------------------------~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvY-vKs~lt~  336 (412)
T KOG3881|consen  282 ------------------------LGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY-VKSRLTF  336 (412)
T ss_pred             ------------------------eccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhh-hhccccE
Confidence                                    234477888999999999999999999999999999999976654432 3456778


Q ss_pred             EEEcCCCCE
Q psy11015        340 AAGRTGGPI  348 (360)
Q Consensus       340 ~~~~~~g~~  348 (360)
                      +.+.++-++
T Consensus       337 il~~~~~n~  345 (412)
T KOG3881|consen  337 ILLRDDVNI  345 (412)
T ss_pred             EEecCCccc
Confidence            887765443

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.15  E-value=6.4e-09  Score=98.08  Aligned_cols=140  Identities=15%  Similarity=0.110  Sum_probs=94.5

Q ss_pred             EEEEEECCCCCEEEEE-eCCC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CCcEEEE--EcccCee
Q psy11015        183 VWDVAVRPGQPVLGSA-SADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIW--QAVINWE  256 (360)
Q Consensus       183 V~~l~~~~~~~~l~sg-s~Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~~i~vw--d~~~~~~  256 (360)
                      +.+++|+|+|+.|+.. +.+|  .|.+||+.++.... +..+...+....|+|+|+.|+.++. ++...+|  |+.++  
T Consensus       245 ~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g--  321 (429)
T PRK03629        245 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGG--  321 (429)
T ss_pred             cCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCC--
Confidence            4468999999977654 4455  48899998887544 3444556789999999998876665 4455555  44433  


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcEEEEECCCCeEEEEEecC
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTILQSLTEP  333 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i~iwd~~~~~~~~~l~~h  333 (360)
                                                 ....+..+...+....|+|+|++|+..+.+   ..|.+||+.++.. ..+...
T Consensus       322 ---------------------------~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~~Lt~~  373 (429)
T PRK03629        322 ---------------------------APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLTDT  373 (429)
T ss_pred             ---------------------------CeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEeCCC
Confidence                                       122333333445678899999999776543   3588899988864 344322


Q ss_pred             CCceEEEEEcCCCCEEEcccc
Q psy11015        334 GEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las~~~  354 (360)
                       .......|+|||.+++.++.
T Consensus       374 -~~~~~p~~SpDG~~i~~~s~  393 (429)
T PRK03629        374 -FLDETPSIAPNGTMVIYSSS  393 (429)
T ss_pred             -CCCCCceECCCCCEEEEEEc
Confidence             23346789999998776654

>KOG1517|consensus

Probab=99.13  E-value=1.4e-09  Score=105.98  Aligned_cols=147  Identities=12%  Similarity=0.135  Sum_probs=112.1

Q ss_pred             CCEEEEEEC-CCCCEEEEEeCCCcEEEEECCCC---eEEEEEeCCCcC--eEEEEEeeCCC-EEEEEeCCCcEEEEEccc
Q psy11015        181 DGVWDVAVR-PGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGS--VNSVRFLPNKD-LVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       181 ~~V~~l~~~-~~~~~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~~~--v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~  253 (360)
                      ..|++++-+ +.|+.++.|..||.|++||.+..   ..+..++.|...  |..+.+.+.|- .+++|+.||.|.+||++.
T Consensus      1209 t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~ 1288 (1387)
T KOG1517|consen 1209 TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRM 1288 (1387)
T ss_pred             ccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEeccc
Confidence            446666543 34689999999999999999764   367888889988  99999998775 499999999999999986


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC---CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH---SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  330 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l  330 (360)
                      ....                          ...+...|   .+..+++..++....+|+|+. +.|+||++. |+.+..+
T Consensus      1289 ~~~e--------------------------~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~ 1340 (1387)
T KOG1517|consen 1289 SSKE--------------------------TFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNII 1340 (1387)
T ss_pred             Cccc--------------------------ccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhccc
Confidence            4110                          11112222   225899999999999999998 999999975 6555555


Q ss_pred             ecC-------CCceEEEEEcCCCCEEEccccc
Q psy11015        331 TEP-------GEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       331 ~~h-------~~~v~~~~~~~~g~~las~~~~  355 (360)
                      +.+       .+++.|++|||--.++|.|+..
T Consensus      1341 k~n~~F~~q~~gs~scL~FHP~~~llAaG~~D 1372 (1387)
T KOG1517|consen 1341 KYNPGFMGQRIGSVSCLAFHPHRLLLAAGSAD 1372 (1387)
T ss_pred             ccCcccccCcCCCcceeeecchhHhhhhccCC
Confidence            433       4578999999998887777644

>KOG1963|consensus

Probab=99.13  E-value=4.6e-09  Score=100.63  Aligned_cols=94  Identities=17%  Similarity=0.186  Sum_probs=77.9

Q ss_pred             eEEEeeecCc--cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC
Q psy11015        158 KIVSSFKTSL--LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  235 (360)
Q Consensus       158 ~~~~~~~~~~--~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~  235 (360)
                      +.+-+|....  ..-...+.+..|.+.|++++|+++|.+|+|||..|.+.+|.+.+++ .+-+..-.++|..+.++||+.
T Consensus       227 GrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~  305 (792)
T KOG1963|consen  227 GRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSD  305 (792)
T ss_pred             CcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCC
Confidence            3344454433  3334556788999999999999999999999999999999999998 555666788999999999999


Q ss_pred             EEEEEeCCCcEEEEEcc
Q psy11015        236 LVLSASGDKSVHIWQAV  252 (360)
Q Consensus       236 ~l~s~s~d~~i~vwd~~  252 (360)
                      +.+....|..|.+....
T Consensus       306 ~~sl~~~DNqI~li~~~  322 (792)
T KOG1963|consen  306 LYSLVLEDNQIHLIKAS  322 (792)
T ss_pred             eEEEEecCceEEEEecc
Confidence            99999999999988763

>KOG0771|consensus

Probab=99.13  E-value=5.4e-10  Score=98.68  Aligned_cols=139  Identities=22%  Similarity=0.223  Sum_probs=107.5

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE---------------
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY---------------  218 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~---------------  218 (360)
                      +.....+.+|.|+.  ...+.+...|.+.|.++.|+|||.+|++-+.| ..+||++++|.++...               
T Consensus       162 gg~dg~lRv~~~Ps--~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~  238 (398)
T KOG0771|consen  162 GGTDGTLRVWEWPS--MLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFS  238 (398)
T ss_pred             ccccceEEEEecCc--chhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceec
Confidence            44555666777653  34456677899999999999999999999999 9999999887222110               


Q ss_pred             ----------------------------eC-----------CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        219 ----------------------------SG-----------HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       219 ----------------------------~~-----------h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                                                  .+           ....|.+++.+++|++++.|+.||.|.+++..+-...  
T Consensus       239 ~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~--  316 (398)
T KOG0771|consen  239 VDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRL--  316 (398)
T ss_pred             ccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeee--
Confidence                                        00           1236899999999999999999999999997654221  


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                                               ...-..|...|+.+.|+|+.+++++.+.|....|..+.
T Consensus       317 -------------------------~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~  354 (398)
T KOG0771|consen  317 -------------------------QYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA  354 (398)
T ss_pred             -------------------------EeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence                                     22334688999999999999999999999888887654

>KOG1310|consensus

Probab=99.13  E-value=1.1e-10  Score=106.07  Aligned_cols=116  Identities=19%  Similarity=0.399  Sum_probs=93.4

Q ss_pred             EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeE-eeCCCC
Q psy11015        215 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSN  293 (360)
Q Consensus       215 ~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~  293 (360)
                      .+.+.||+|.|+++.|+.+|.+|++||.|-.+.|||.-.-                            ++++. -+||..
T Consensus        43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~----------------------------KllhsI~TgHta   94 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEY----------------------------KLLHSISTGHTA   94 (758)
T ss_pred             hhhhccccceecceeecCCCCEEeecCCcceEEeecchhc----------------------------ceeeeeeccccc
Confidence            4568899999999999999999999999999999997532                            23333 368999


Q ss_pred             cEEEEEEcC--CCCEEEEEECCCcEEEEECCCC----------eEEEEEecCCCceEEEEEcCCCC--EEEcccccchh
Q psy11015        294 VVIAADWLS--DGEQVITASWDRVANLFDVETG----------TILQSLTEPGEAIRAAAGRTGGP--IRASPLLLAIR  358 (360)
Q Consensus       294 ~v~~i~~sp--~g~~l~tgs~dg~i~iwd~~~~----------~~~~~l~~h~~~v~~~~~~~~g~--~las~~~~~ir  358 (360)
                      .|.+++|-|  +.+.+++|..|..|+++|+...          .....+..|...|..++-.|+++  +...+.|+.||
T Consensus        95 NIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtir  173 (758)
T KOG1310|consen   95 NIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIR  173 (758)
T ss_pred             ceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCccee
Confidence            999999998  4568899999999999999741          23344556888899999999984  34455688776

>KOG4547|consensus

Probab=99.11  E-value=3e-09  Score=97.77  Aligned_cols=132  Identities=22%  Similarity=0.228  Sum_probs=115.4

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC
Q psy11015        193 PVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE  270 (360)
Q Consensus       193 ~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~  270 (360)
                      ..++-|...|.|.+|++..|+....+.  +|.+.|.++.++.+-..|.+++.|+.+..|+....                
T Consensus        71 ~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~----------------  134 (541)
T KOG4547|consen   71 SMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEK----------------  134 (541)
T ss_pred             eEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccc----------------
Confidence            378888999999999999998887776  68999999999998889999999999999998765                


Q ss_pred             CCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCC-----
Q psy11015        271 SKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTG-----  345 (360)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~-----  345 (360)
                                  .......+....+.+++.+|||..+++|+  +.|++||+.+++.+..|.+|.++|.++.|--.     
T Consensus       135 ------------~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~  200 (541)
T KOG4547|consen  135 ------------VIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGII  200 (541)
T ss_pred             ------------eeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccc
Confidence                        33555667778899999999999999998  78999999999999999999999999999766     


Q ss_pred             CCEEEcccc
Q psy11015        346 GPIRASPLL  354 (360)
Q Consensus       346 g~~las~~~  354 (360)
                      |.++.+++.
T Consensus       201 G~~vLssa~  209 (541)
T KOG4547|consen  201 GKYVLSSAA  209 (541)
T ss_pred             cceeeeccc
Confidence            666666554

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.11  E-value=1.1e-08  Score=96.64  Aligned_cols=146  Identities=16%  Similarity=0.137  Sum_probs=97.5

Q ss_pred             ecCCCCEEEEEECCCCCEEE-EEeCCC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCc--EEEEE
Q psy11015        177 SGHRDGVWDVAVRPGQPVLG-SASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKS--VHIWQ  250 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~~~l~-sgs~Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~--i~vwd  250 (360)
                      ..+.+...+.+|+|+|+.|+ +.+.+|  .|.+||+.++.. ..+..+.+....++|+|+|+.++.++ .++.  +.++|
T Consensus       244 ~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~d  322 (433)
T PRK04922        244 ASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVA  322 (433)
T ss_pred             ccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence            33444556789999998664 556666  599999988864 34555655667899999999887765 3455  55555


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC---cEEEEECCCCeEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR---VANLFDVETGTIL  327 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg---~i~iwd~~~~~~~  327 (360)
                      +.++.                             ...+..+.......+|+|+|++|+..+.++   .|.+||+.+++..
T Consensus       323 l~~g~-----------------------------~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~  373 (433)
T PRK04922        323 ASGGS-----------------------------AERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR  373 (433)
T ss_pred             CCCCC-----------------------------eEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE
Confidence            54441                             122222223445689999999998765443   5999999888654


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                       .+. +........|+|+|+.++.+..
T Consensus       374 -~Lt-~~~~~~~p~~spdG~~i~~~s~  398 (433)
T PRK04922        374 -TLT-PGSLDESPSFAPNGSMVLYATR  398 (433)
T ss_pred             -ECC-CCCCCCCceECCCCCEEEEEEe
Confidence             443 3334556799999997765443

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.11  E-value=5.8e-09  Score=98.68  Aligned_cols=151  Identities=13%  Similarity=0.107  Sum_probs=102.3

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCC--c
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK--S  245 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D---g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~--~  245 (360)
                      ..+.+..+...+...+|+|+|+.|+..+.+   ..|.+||+.++.... +....+.+....|+|+|+.++ +.+.++  .
T Consensus       190 ~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~  268 (430)
T PRK00178        190 RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPE  268 (430)
T ss_pred             CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCce
Confidence            345566777889999999999988776544   368999999886533 333344556789999998776 455555  5


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CC--cEEEEECC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DR--VANLFDVE  322 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg--~i~iwd~~  322 (360)
                      |.+||+.++.                             ...+..+........|+|+|+.++..+. +|  .|.++|+.
T Consensus       269 Iy~~d~~~~~-----------------------------~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~  319 (430)
T PRK00178        269 IYVMDLASRQ-----------------------------LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVN  319 (430)
T ss_pred             EEEEECCCCC-----------------------------eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECC
Confidence            7778887652                             2334444455667889999998876554 33  47777887


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +++.. .+..........+|+|+|.+++...
T Consensus       320 ~g~~~-~lt~~~~~~~~~~~Spdg~~i~~~~  349 (430)
T PRK00178        320 GGRAE-RVTFVGNYNARPRLSADGKTLVMVH  349 (430)
T ss_pred             CCCEE-EeecCCCCccceEECCCCCEEEEEE
Confidence            77643 3322223344578999999887544

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.11  E-value=6.2e-09  Score=98.56  Aligned_cols=148  Identities=9%  Similarity=0.064  Sum_probs=101.8

Q ss_pred             eeeecCCCCEEEEEECCCCCEE-EEEeCCCc--EEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CC--cEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVL-GSASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK--SVH  247 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l-~sgs~Dg~--v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~--~i~  247 (360)
                      +.+..+.+.+.+.+|+|+|..| ++.+.++.  |.+||+.++.. ..+..+.+......|+|||+.++..+. ++  .|.
T Consensus       239 ~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy  317 (435)
T PRK05137        239 ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLY  317 (435)
T ss_pred             EEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEE
Confidence            3455667778889999999865 46666665  77778887765 445556666778999999998876653 33  577


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcEEEEECCCC
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETG  324 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i~iwd~~~~  324 (360)
                      +||+..+                             ....+..+...+....|+|+|++|+..+.+   ..|.+||+.++
T Consensus       318 ~~d~~g~-----------------------------~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~  368 (435)
T PRK05137        318 VMNADGS-----------------------------NPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGS  368 (435)
T ss_pred             EEECCCC-----------------------------CeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence            7776544                             223333344556678899999999876643   35888897655


Q ss_pred             eEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      . ...+. ....+....|+|+|+.++...
T Consensus       369 ~-~~~lt-~~~~~~~p~~spDG~~i~~~~  395 (435)
T PRK05137        369 G-ERILT-SGFLVEGPTWAPNGRVIMFFR  395 (435)
T ss_pred             c-eEecc-CCCCCCCCeECCCCCEEEEEE
Confidence            4 34443 233567889999999776543

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.11  E-value=1.9e-08  Score=91.71  Aligned_cols=170  Identities=12%  Similarity=0.046  Sum_probs=109.4

Q ss_pred             CeEEEeeecCc-cceeeeeeeecCCCCEEEEEECCCCCEEEEEe-CCCcEEEEECC-CCeE--EEEEeCCCcCeEEEEEe
Q psy11015        157 SKIVSSFKTSL-LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQ-TGKC--VLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       157 ~~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs-~Dg~v~iwd~~-~~~~--~~~~~~h~~~v~~i~~~  231 (360)
                      ++-+..|.... .....+.++. +.+....++++|++++|+.++ .++.|.+|++. ++..  +.... ..+....++|+
T Consensus        11 ~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~   88 (330)
T PRK11028         11 SQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTD   88 (330)
T ss_pred             CCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEEC
Confidence            34445555532 2334556664 345677889999999876664 58899999997 3432  22222 33457789999


Q ss_pred             eCCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE
Q psy11015        232 PNKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  310 (360)
Q Consensus       232 p~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg  310 (360)
                      |+++++++++. ++.|.+|++......                        ...+..+. +.....+++++|+|++++++
T Consensus        89 ~~g~~l~v~~~~~~~v~v~~~~~~g~~------------------------~~~~~~~~-~~~~~~~~~~~p~g~~l~v~  143 (330)
T PRK11028         89 HQGRFLFSASYNANCVSVSPLDKDGIP------------------------VAPIQIIE-GLEGCHSANIDPDNRTLWVP  143 (330)
T ss_pred             CCCCEEEEEEcCCCeEEEEEECCCCCC------------------------CCceeecc-CCCcccEeEeCCCCCEEEEe
Confidence            99998887764 889999998643110                        01122222 22345678899999998655


Q ss_pred             E-CCCcEEEEECCCCeEEE-----EEe-cCCCceEEEEEcCCCCEEEccc
Q psy11015        311 S-WDRVANLFDVETGTILQ-----SLT-EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       311 s-~dg~i~iwd~~~~~~~~-----~l~-~h~~~v~~~~~~~~g~~las~~  353 (360)
                      + .++.|.+||+.+...+.     ... ........++|+|+|++++.+.
T Consensus       144 ~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~  193 (330)
T PRK11028        144 CLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVN  193 (330)
T ss_pred             eCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEe
Confidence            5 56999999997633221     111 1234567899999999876554

>KOG1587|consensus

Probab=99.10  E-value=9.2e-10  Score=104.44  Aligned_cols=125  Identities=20%  Similarity=0.353  Sum_probs=102.4

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEE
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQ  250 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~-~~~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd  250 (360)
                      +..+..|.++|+++.++|-+..++..+.|.+|+||... ...++..+..+...|++++|||.. ..|+++..||.+.+||
T Consensus       391 ~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWD  470 (555)
T KOG1587|consen  391 HSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWD  470 (555)
T ss_pred             cccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhh
Confidence            55677899999999999977755555559999999988 667888888888889999999965 5778889999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      +...                          ...|+.+..-+....+.+.|++.|+.+++|...|++++|++..
T Consensus       471 Ll~~--------------------------~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  471 LLQD--------------------------DEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             hhcc--------------------------ccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            9754                          2234555555566777888999999999999999999999863

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.08  E-value=6.3e-09  Score=98.14  Aligned_cols=148  Identities=14%  Similarity=0.106  Sum_probs=97.1

Q ss_pred             cCCCCEEEEEECCCCCEEE-EEeCCCcEEEEEC--CCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CCcEEEEEccc
Q psy11015        178 GHRDGVWDVAVRPGQPVLG-SASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIWQAVI  253 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~-sgs~Dg~v~iwd~--~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~~i~vwd~~~  253 (360)
                      ...+.+.+.+|+|+|+.|+ +.+.+|...||.+  ..+. ...+..+.+......|+|||+.++..+. ++...+|.+..
T Consensus       237 ~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~  315 (427)
T PRK02889        237 NFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPA  315 (427)
T ss_pred             cCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEEC
Confidence            3445567889999998765 6778888777654  4443 4555556666778899999998776553 56777776532


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC---cEEEEECCCCeEEEEE
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR---VANLFDVETGTILQSL  330 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg---~i~iwd~~~~~~~~~l  330 (360)
                      ..                           .....+..+.......+|+|+|++|+..+.++   .|.+||+.++... .+
T Consensus       316 ~~---------------------------g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~l  367 (427)
T PRK02889        316 SG---------------------------GAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-AL  367 (427)
T ss_pred             CC---------------------------CceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-Ec
Confidence            10                           01111111222344678999999998776554   5999999888654 33


Q ss_pred             ecCCCceEEEEEcCCCCEEEccccc
Q psy11015        331 TEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      ... .......|+|+|+.++.+...
T Consensus       368 t~~-~~~~~p~~spdg~~l~~~~~~  391 (427)
T PRK02889        368 TDT-TRDESPSFAPNGRYILYATQQ  391 (427)
T ss_pred             cCC-CCccCceECCCCCEEEEEEec
Confidence            322 334678999999987766543

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.07  E-value=4e-08  Score=89.61  Aligned_cols=150  Identities=8%  Similarity=0.003  Sum_probs=99.0

Q ss_pred             CCEEEEEECCCCCEEEEEeC-CCcEEEEECCC-C---eEEEEEeCCCcCeEEEEEeeCCCEEEE-EeCCCcEEEEEcccC
Q psy11015        181 DGVWDVAVRPGQPVLGSASA-DRTVRLWSTQT-G---KCVLQYSGHSGSVNSVRFLPNKDLVLS-ASGDKSVHIWQAVIN  254 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~-~---~~~~~~~~h~~~v~~i~~~p~~~~l~s-~s~d~~i~vwd~~~~  254 (360)
                      +....++|+|+++++++++. ++.|.+|++.+ +   ..+..+. +.....+++++|+++++++ ...++.|.+||+.+.
T Consensus        80 ~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~  158 (330)
T PRK11028         80 GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD  158 (330)
T ss_pred             CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence            45678999999998888765 88999999974 3   2333333 2344678899999988855 456799999998753


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECCC--C--eEEEE
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDVET--G--TILQS  329 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~~--~--~~~~~  329 (360)
                      ..+...                     ......... ......++|+|+|+++++++. ++.|.+|++..  +  +.+..
T Consensus       159 g~l~~~---------------------~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~  216 (330)
T PRK11028        159 GHLVAQ---------------------EPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQT  216 (330)
T ss_pred             Cccccc---------------------CCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEE
Confidence            211000                     000011111 233567899999999988876 89999999973  3  33444


Q ss_pred             EecCC------CceEEEEEcCCCCEEEccc
Q psy11015        330 LTEPG------EAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       330 l~~h~------~~v~~~~~~~~g~~las~~  353 (360)
                      +..+.      .....++++|+|++++++.
T Consensus       217 ~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~  246 (330)
T PRK11028        217 LDMMPADFSDTRWAADIHITPDGRHLYACD  246 (330)
T ss_pred             EecCCCcCCCCccceeEEECCCCCEEEEec
Confidence            43221      1234688999999887763

>KOG4190|consensus

Probab=99.03  E-value=1.3e-10  Score=105.93  Aligned_cols=160  Identities=20%  Similarity=0.373  Sum_probs=113.1

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC-------CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-------GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD  243 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-------~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d  243 (360)
                      -.+..|.||+..|.+++.-.+.+.+++++.|++|++|.++.       ..|..+|+.|..+|.++.|-.+-+++++  .|
T Consensus       726 irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD  803 (1034)
T KOG4190|consen  726 IRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CD  803 (1034)
T ss_pred             eeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--cc
Confidence            45678899999999998777788999999999999999863       2488899999999999999988777764  57


Q ss_pred             CcEEEEEcccCeeEeeeCCCCC--CCCC---CCC----------CCC------CCcccccc-c--eeEeeCCCCcEEEEE
Q psy11015        244 KSVHIWQAVINWECLVSNNDND--SDLD---ESK----------EPD------ESSITLRT-P--VKELLGHSNVVIAAD  299 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~--~~~~---~~~----------~~~------~~~~~~~~-~--~~~~~~h~~~v~~i~  299 (360)
                      +-|++||.-.+....+......  ....   ...          ...      +.....|. .  +....+....+.+++
T Consensus       804 ~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~ia  883 (1034)
T KOG4190|consen  804 GGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIA  883 (1034)
T ss_pred             CcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEE
Confidence            8899999766554432211100  0000   000          000      00000011 1  111234456789999


Q ss_pred             EcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        300 WLSDGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       300 ~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                      ..|.|++++.|-.+|+|.+.|.++|+.+..++.
T Consensus       884 Va~~GN~lAa~LSnGci~~LDaR~G~vINswrp  916 (1034)
T KOG4190|consen  884 VADKGNKLAAALSNGCIAILDARNGKVINSWRP  916 (1034)
T ss_pred             eccCcchhhHHhcCCcEEEEecCCCceeccCCc
Confidence            999999999999999999999999998876653

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.03  E-value=1.7e-08  Score=95.72  Aligned_cols=149  Identities=16%  Similarity=0.158  Sum_probs=97.8

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCC-C--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEE-EeCCCc--EE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASAD-R--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS-ASGDKS--VH  247 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~D-g--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s-~s~d~~--i~  247 (360)
                      +.+..+...+.+..|+|+|+.|+..+.+ +  .|.+||+.+++... +....+......|+|+|+.|+. .+.++.  |.
T Consensus       211 ~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy  289 (448)
T PRK04792        211 QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIY  289 (448)
T ss_pred             eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEE
Confidence            3455566778899999999988776543 3  58889998876432 2222334457899999997754 566665  66


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CC--cEEEEECCCC
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DR--VANLFDVETG  324 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg--~i~iwd~~~~  324 (360)
                      +||+.++                             ....+..+.......+|+|||++|+..+. +|  .|.++|+.++
T Consensus       290 ~~dl~tg-----------------------------~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g  340 (448)
T PRK04792        290 VVDIATK-----------------------------ALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASG  340 (448)
T ss_pred             EEECCCC-----------------------------CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            6677655                             22334445455677899999998876553 34  4666687777


Q ss_pred             eEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +.. .+..........+|+|+|.+++...
T Consensus       341 ~~~-~Lt~~g~~~~~~~~SpDG~~l~~~~  368 (448)
T PRK04792        341 KVS-RLTFEGEQNLGGSITPDGRSMIMVN  368 (448)
T ss_pred             CEE-EEecCCCCCcCeeECCCCCEEEEEE
Confidence            643 3322223344578999998776543

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.01  E-value=1.6e-09  Score=65.25  Aligned_cols=39  Identities=33%  Similarity=0.617  Sum_probs=37.3

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS  208 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd  208 (360)
                      +++++++.+|.+.|++|+|+|++.+|+||+.|++|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            468899999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0280|consensus

Probab=99.00  E-value=5.9e-09  Score=88.26  Aligned_cols=157  Identities=11%  Similarity=0.128  Sum_probs=109.6

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECC-CCeEEEE-EeCCCcCeEEEEEee-CCCEEEEEeCC
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQ-TGKCVLQ-YSGHSGSVNSVRFLP-NKDLVLSASGD  243 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~-~~~~~~~-~~~h~~~v~~i~~~p-~~~~l~s~s~d  243 (360)
                      ...+.+++.++|.-++|...|+... ++++|||.|+.+..||++ .++.+.. .+-|...|.+|.-+| .+.++++|+.|
T Consensus       153 ~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYD  232 (339)
T KOG0280|consen  153 MVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYD  232 (339)
T ss_pred             eeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccc
Confidence            3445556889999999999998754 499999999999999999 4455444 456889999999886 57799999999


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC--EEEEEECCCcEEEEEC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE--QVITASWDRVANLFDV  321 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~--~l~tgs~dg~i~iwd~  321 (360)
                      ..|++||.+.-                           .+|+.... -.+.|+.+.++|.-.  .++++-..| .+|-++
T Consensus       233 e~i~~~DtRnm---------------------------~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~  283 (339)
T KOG0280|consen  233 ECIRVLDTRNM---------------------------GKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNG-AKILDS  283 (339)
T ss_pred             cceeeeehhcc---------------------------cCccccCc-cccceEEEEecchhhhHHHHHHHhcC-ceEEEe
Confidence            99999998843                           12332222 237899999998532  344444444 456655


Q ss_pred             CCC--e---EEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        322 ETG--T---ILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       322 ~~~--~---~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ..+  +   .....+.|.+-+..-.|..-..++||.+
T Consensus       284 ~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCs  320 (339)
T KOG0280|consen  284 SDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCS  320 (339)
T ss_pred             cccccchheeeeccccccceeeccccccccceeeeee
Confidence            433  2   2344456776666677755556677743

>KOG0280|consensus

Probab=99.00  E-value=1e-08  Score=86.81  Aligned_cols=135  Identities=13%  Similarity=0.133  Sum_probs=105.0

Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        184 WDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      .++.|++.+..++++-.+|.+.+-+.....  .++.+++|.-+.+...|+. +.+++.+||.|+.+.-||++......  
T Consensus       125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i--  202 (339)
T KOG0280|consen  125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFI--  202 (339)
T ss_pred             eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCccee--
Confidence            466799999999999999999866655553  4458999999999999975 45789999999999999998442211  


Q ss_pred             CCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECC-CCeEEEEEecCCCceE
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVE-TGTILQSLTEPGEAIR  338 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~-~~~~~~~l~~h~~~v~  338 (360)
                                              -.....|...|.+|.-+| .+.+++||+.|-.|++||.+ .++++..-. -.+.|+
T Consensus       203 ------------------------~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVW  257 (339)
T KOG0280|consen  203 ------------------------WHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVW  257 (339)
T ss_pred             ------------------------eecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceE
Confidence                                    122345888999998876 57799999999999999998 466655443 347788


Q ss_pred             EEEEcCC
Q psy11015        339 AAAGRTG  345 (360)
Q Consensus       339 ~~~~~~~  345 (360)
                      -+.++|.
T Consensus       258 Ri~~~p~  264 (339)
T KOG0280|consen  258 RIKHHPE  264 (339)
T ss_pred             EEEecch
Confidence            8888875

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.96  E-value=3.5e-07  Score=84.17  Aligned_cols=162  Identities=15%  Similarity=0.055  Sum_probs=105.8

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCc
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKS  245 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~  245 (360)
                      ..+.+.+.++......-..+.|+|||++++.++.||.|.++|+.+++.+..+.. .....++++++||++++++. ..+.
T Consensus        23 ~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~  101 (369)
T PF02239_consen   23 GATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV-GGNPRGIAVSPDGKYVYVANYEPGT  101 (369)
T ss_dssp             TTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSEEEEEEE--TTTEEEEEEEETTE
T ss_pred             CCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec-CCCcceEEEcCCCCEEEEEecCCCc
Confidence            455677778876544445577999999999999999999999999999999984 44578999999999988765 6889


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASW-DRVANLFDVE  322 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~  322 (360)
                      +.++|..+.+....+                       +.....  +....+.++..+|....++..-. .+.|.+.|..
T Consensus       102 v~v~D~~tle~v~~I-----------------------~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~  158 (369)
T PF02239_consen  102 VSVIDAETLEPVKTI-----------------------PTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYS  158 (369)
T ss_dssp             EEEEETTT--EEEEE-----------------------E--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETT
T ss_pred             eeEeccccccceeec-----------------------ccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEec
Confidence            999998876433221                       111111  13456788888888886655554 4888888877


Q ss_pred             CCeEEE-EEecCCCceEEEEEcCCCCEEEcc
Q psy11015        323 TGTILQ-SLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       323 ~~~~~~-~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                      ....+. .............|+|+|+++..+
T Consensus       159 d~~~~~~~~i~~g~~~~D~~~dpdgry~~va  189 (369)
T PF02239_consen  159 DPKNLKVTTIKVGRFPHDGGFDPDGRYFLVA  189 (369)
T ss_dssp             TSSCEEEEEEE--TTEEEEEE-TTSSEEEEE
T ss_pred             cccccceeeecccccccccccCcccceeeec
Confidence            654332 233345567889999999987654

...

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.93  E-value=6.3e-08  Score=91.15  Aligned_cols=146  Identities=18%  Similarity=0.167  Sum_probs=92.2

Q ss_pred             CCCEEEEEECCCCCEEEEEeC-----CCcEEEEECCCC---eEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcEEEEE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASA-----DRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQ  250 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~-----Dg~v~iwd~~~~---~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i~vwd  250 (360)
                      .+.....+|+|||+.|+..+.     |..+.+|++..+   .......++.+.....+|+|||+.|+..+ .++...+|.
T Consensus       230 ~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~  309 (428)
T PRK01029        230 QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYI  309 (428)
T ss_pred             CCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEE
Confidence            344556789999987766543     223455777653   33333333334456789999999776655 567666665


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcEEEEECCCCeEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTIL  327 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i~iwd~~~~~~~  327 (360)
                      +....                         .......+..+...+....|+|||++|+..+.+   ..|.+||+.+++..
T Consensus       310 ~~~~~-------------------------~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~  364 (428)
T PRK01029        310 MQIDP-------------------------EGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY  364 (428)
T ss_pred             EECcc-------------------------cccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE
Confidence            42110                         001123344444566788999999998766543   36999999888754


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEc
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las  351 (360)
                       .+......+....|+|+|+.++-
T Consensus       365 -~Lt~~~~~~~~p~wSpDG~~L~f  387 (428)
T PRK01029        365 -QLTTSPENKESPSWAIDSLHLVY  387 (428)
T ss_pred             -EccCCCCCccceEECCCCCEEEE
Confidence             34333446678999999987763

>KOG1334|consensus

Probab=98.93  E-value=3.5e-09  Score=95.25  Aligned_cols=163  Identities=19%  Similarity=0.187  Sum_probs=125.7

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE-eCCCcCeEEEEEeeC--CCEEEEEeCCCc
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPN--KDLVLSASGDKS  245 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-~~h~~~v~~i~~~p~--~~~l~s~s~d~~  245 (360)
                      ...+...|.+|.|.|..|.|+..|..|+|||.|..|.+||...+.....| .||...|....|-|.  .+.+++++.||.
T Consensus       131 r~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgq  210 (559)
T KOG1334|consen  131 RLRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQ  210 (559)
T ss_pred             HhhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCc
Confidence            34566778999999999999999999999999999999999988776666 478888988889884  467999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEECCCcEEEEECCCC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETG  324 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~dg~i~iwd~~~~  324 (360)
                      +++=.+.....+                         .....+..|.++|..++.-|+.. .|.+++.|+.+.-+|++++
T Consensus       211 vr~s~i~~t~~~-------------------------e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~  265 (559)
T KOG1334|consen  211 VRVSEILETGYV-------------------------ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQD  265 (559)
T ss_pred             eeeeeeccccce-------------------------ecceecccccCccceeeecCCCCCcccccccccceeeeeeccC
Confidence            998765433222                         12455667999999999999765 4789999999999999987


Q ss_pred             eEEEEE---ecCCC---ceEEEEEcCCCC-EEE-cccccc
Q psy11015        325 TILQSL---TEPGE---AIRAAAGRTGGP-IRA-SPLLLA  356 (360)
Q Consensus       325 ~~~~~l---~~h~~---~v~~~~~~~~g~-~la-s~~~~~  356 (360)
                      .+...+   ..+..   ...+++.+|... .+| .+.+.-
T Consensus       266 ~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf  305 (559)
T KOG1334|consen  266 VPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQF  305 (559)
T ss_pred             CccceeeeeccCCccceeeeeEecCCCCccccccCChhhh
Confidence            654333   23333   568888888654 444 444443

>KOG4227|consensus

Probab=98.91  E-value=2.5e-08  Score=87.59  Aligned_cols=148  Identities=13%  Similarity=0.087  Sum_probs=108.4

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      .|..-|.|++|+....++++|+.+++|...|+++.+.+-.+.  ...+.|+.+..+|..+.|++.+.++.|.+||.+...
T Consensus       103 ~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~  182 (609)
T KOG4227|consen  103 PHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ  182 (609)
T ss_pred             ccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence            367899999999999999999999999999999988877765  233589999999999999999999999999987541


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeE-EEE---E
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTI-LQS---L  330 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~-~~~---l  330 (360)
                      .                        ...++. +........++-|+|.. .+|++.+..|-+.+||.+.... +..   +
T Consensus       183 ~------------------------~~~~~~-~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~  237 (609)
T KOG4227|consen  183 N------------------------PISLVL-PANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMF  237 (609)
T ss_pred             C------------------------CCceee-ecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhcc
Confidence            0                        011111 11233456778899965 5678889899999999875431 111   1


Q ss_pred             ecC---CCceEEEEEcCCCCEEE
Q psy11015        331 TEP---GEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       331 ~~h---~~~v~~~~~~~~g~~la  350 (360)
                      .+.   ...-.++.|+|+|+.+.
T Consensus       238 ~~L~~~~~~~M~~~~~~~G~Q~m  260 (609)
T KOG4227|consen  238 KGLPQENTEWMGSLWSPSGNQFM  260 (609)
T ss_pred             ccCcccchhhhheeeCCCCCeeh
Confidence            111   11235677899887654

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.91  E-value=7.9e-08  Score=90.60  Aligned_cols=147  Identities=14%  Similarity=0.138  Sum_probs=98.9

Q ss_pred             eecCCCCEEEEEECCCCCEEE-EEeCCC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CC--cEEEE
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLG-SASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK--SVHIW  249 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~-sgs~Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~--~i~vw  249 (360)
                      +..+.+.+.+++|+|+++.|+ +.+.++  .|.+||+.++... .+..+.+......|+|+|+.|+.++. ++  .|.+|
T Consensus       229 ~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~  307 (417)
T TIGR02800       229 VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMM  307 (417)
T ss_pred             eecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEE
Confidence            344556677889999998665 555554  5888998877543 34445555667899999998776554 33  46666


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC---cEEEEECCCCeE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR---VANLFDVETGTI  326 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg---~i~iwd~~~~~~  326 (360)
                      |+.++                             ....+..+...+....|+|+|++++.++.++   .|.+||+.++..
T Consensus       308 d~~~~-----------------------------~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~  358 (417)
T TIGR02800       308 DADGG-----------------------------EVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE  358 (417)
T ss_pred             ECCCC-----------------------------CEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe
Confidence            66544                             1223333445667889999999998888775   789999887653


Q ss_pred             EEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        327 LQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       327 ~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                       ..+... ......+|+|+|..++.+..
T Consensus       359 -~~l~~~-~~~~~p~~spdg~~l~~~~~  384 (417)
T TIGR02800       359 -RVLTDT-GLDESPSFAPNGRMILYATT  384 (417)
T ss_pred             -EEccCC-CCCCCceECCCCCEEEEEEe
Confidence             333322 23455689999987765543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2321|consensus

Probab=98.88  E-value=3.2e-08  Score=90.91  Aligned_cols=151  Identities=15%  Similarity=0.115  Sum_probs=112.0

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCC
Q psy11015        185 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDN  264 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~  264 (360)
                      +++++.-..-|+.++....|+=++++.|+.+..|....+.+++|..++...+|++|+.+|.|-.||.+....+.....  
T Consensus       138 Dm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~--  215 (703)
T KOG2321|consen  138 DMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDA--  215 (703)
T ss_pred             cccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeec--
Confidence            444443333456666666788889999999999998889999999999999999999999999999886643322111  


Q ss_pred             CCCCCCCCCCCCCccccccceeEeeCCC-----CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe-cCCCceE
Q psy11015        265 DSDLDESKEPDESSITLRTPVKELLGHS-----NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIR  338 (360)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~-~h~~~v~  338 (360)
                                          ...+..|.     ..|++++|+.+|-.+++|+.+|.+.|||+++.+++..-. +..-+|.
T Consensus       216 --------------------~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~  275 (703)
T KOG2321|consen  216 --------------------ASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIK  275 (703)
T ss_pred             --------------------ccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCcccee
Confidence                                11122233     359999999889999999999999999999998875543 2355889


Q ss_pred             EEEEcCC--CCEEEcccccch
Q psy11015        339 AAAGRTG--GPIRASPLLLAI  357 (360)
Q Consensus       339 ~~~~~~~--g~~las~~~~~i  357 (360)
                      .+.|.+.  ++-++|.....+
T Consensus       276 ~l~~~~~~~q~~v~S~Dk~~~  296 (703)
T KOG2321|consen  276 KLDWQDTDQQNKVVSMDKRIL  296 (703)
T ss_pred             eecccccCCCceEEecchHHh
Confidence            9999765  556666544433

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.88  E-value=8.2e-09  Score=62.11  Aligned_cols=39  Identities=38%  Similarity=0.886  Sum_probs=37.1

Q ss_pred             CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        212 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       212 ~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      |+++.++.+|.+.|++++|+|++.+|++|+.|++|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            467899999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG3914|consensus

Probab=98.87  E-value=3.3e-08  Score=87.12  Aligned_cols=120  Identities=18%  Similarity=0.316  Sum_probs=91.4

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      .+..+..+........++....+.+|....+.+. .+-||-+-+++|+|+||+++++++..|..|+|-.+...       
T Consensus       112 ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~-~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~-------  183 (390)
T KOG3914|consen  112 AISFIREDTSVLVADKAGDVYSFDILSADSGRCE-PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPAT-------  183 (390)
T ss_pred             eeeeeeccceEEEEeecCCceeeeeecccccCcc-hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcc-------
Confidence            4455555555545555666777888887765544 34579999999999999999999999999998765422       


Q ss_pred             CCCCCCCCCCCCCCCCccccccceeE-eeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        262 NDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                                           ..+.. +.||..-|..++.-+ +..|++||.|++|++||+.+|+++.++.
T Consensus       184 ---------------------f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  184 ---------------------FVIESFCLGHKEFVSTISLTD-NYLLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             ---------------------cchhhhccccHhheeeeeecc-CceeeecCCCCcEEEEecccCCcccccc
Confidence                                 11222 348999999999875 4568999999999999999999887664

>KOG2315|consensus

Probab=98.86  E-value=1.4e-07  Score=86.62  Aligned_cols=138  Identities=15%  Similarity=0.162  Sum_probs=102.7

Q ss_pred             EEEEECCCCC-EE--EEEeCCC---------cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEE--EeCCCcEEEE
Q psy11015        184 WDVAVRPGQP-VL--GSASADR---------TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS--ASGDKSVHIW  249 (360)
Q Consensus       184 ~~l~~~~~~~-~l--~sgs~Dg---------~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s--~s~d~~i~vw  249 (360)
                      ..+.|++-|. +|  ++..-|+         ++.+.++....+...+. ..|+|+++.|+|+++-|++  |-+-.++.||
T Consensus       221 vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtif  299 (566)
T KOG2315|consen  221 VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIF  299 (566)
T ss_pred             eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEE
Confidence            4567888776 33  3333343         57777777445555555 5789999999999987655  4556789999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcEEEEECCCCeE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTI  326 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i~iwd~~~~~~  326 (360)
                      |++..                             ++..+  -.++-+.+-|+|.|++++.+|.+   |.|-|||+.+.++
T Consensus       300 nlr~~-----------------------------~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~  348 (566)
T KOG2315|consen  300 NLRGK-----------------------------PVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKL  348 (566)
T ss_pred             cCCCC-----------------------------EeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhh
Confidence            98743                             44444  35667889999999999988765   8899999999999


Q ss_pred             EEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        327 LQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       327 ~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      +..+.....  +-+.|+|||.++.|++..
T Consensus       349 i~~~~a~~t--t~~eW~PdGe~flTATTa  375 (566)
T KOG2315|consen  349 IAKFKAANT--TVFEWSPDGEYFLTATTA  375 (566)
T ss_pred             ccccccCCc--eEEEEcCCCcEEEEEecc
Confidence            988876543  557999999999988753

>KOG2695|consensus

Probab=98.85  E-value=6.6e-09  Score=89.81  Aligned_cols=139  Identities=13%  Similarity=0.238  Sum_probs=106.8

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----eEEEEEeCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEEccc
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----KCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-----~~~~~~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd~~~  253 (360)
                      .+.|.++.|...+++++.|+..|.|.+.|++.+     .+...+- |.+.|+++..-. ++++|.+.+++|+|++||.+.
T Consensus       252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~  330 (425)
T KOG2695|consen  252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRA  330 (425)
T ss_pred             chhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehh
Confidence            456888889988999999999999999999864     4556665 899999988765 788999999999999999875


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEE--EEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI--AADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~--~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      -..                         +..+.+..||...-.  -+...+....+++++.|...|||.+..|..+.++.
T Consensus       331 ~K~-------------------------~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tip  385 (425)
T KOG2695|consen  331 TKC-------------------------KKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIP  385 (425)
T ss_pred             hhc-------------------------ccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccC
Confidence            421                         123667778854332  23345667788999999999999999999988886


Q ss_pred             cC----CCceEEEEEcC
Q psy11015        332 EP----GEAIRAAAGRT  344 (360)
Q Consensus       332 ~h----~~~v~~~~~~~  344 (360)
                      -.    ...+.+++|..
T Consensus       386 f~~s~~e~d~~sv~~~s  402 (425)
T KOG2695|consen  386 FPYSASEVDIPSVAFDS  402 (425)
T ss_pred             CCCccccccccceehhc
Confidence            43    23456677653

>KOG4547|consensus

Probab=98.82  E-value=1.7e-07  Score=86.52  Aligned_cols=125  Identities=18%  Similarity=0.193  Sum_probs=105.8

Q ss_pred             cceeeeeeee--cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        168 LSCYKIRSFS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       168 ~~~~~~~~l~--~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      ..++....+.  +|-+.|.++.++.+-..|.|++.|+.+..|+....+.++.+++....+.+++++|||..+++++  +.
T Consensus        88 ~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~  165 (541)
T KOG4547|consen   88 AGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQ  165 (541)
T ss_pred             cCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ce
Confidence            4455555554  5999999999999988999999999999999999999999999999999999999999998877  67


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-----CCEEEEE-ECCCcEEEE
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-----GEQVITA-SWDRVANLF  319 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-----g~~l~tg-s~dg~i~iw  319 (360)
                      |++||+.++                            ..+..|.||.++|++++|--.     |.+++++ ..+.-+.+|
T Consensus       166 ik~~~~~~k----------------------------evv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w  217 (541)
T KOG4547|consen  166 IKVLDIETK----------------------------EVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVW  217 (541)
T ss_pred             EEEEEccCc----------------------------eEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEE
Confidence            999999876                            567889999999999999765     6776654 445667777


Q ss_pred             ECC
Q psy11015        320 DVE  322 (360)
Q Consensus       320 d~~  322 (360)
                      -+.
T Consensus       218 ~v~  220 (541)
T KOG4547|consen  218 VVE  220 (541)
T ss_pred             EEE
Confidence            654

>KOG4497|consensus

Probab=98.82  E-value=1.3e-08  Score=87.42  Aligned_cols=102  Identities=17%  Similarity=0.203  Sum_probs=78.3

Q ss_pred             CCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCE-EEEEeCCCcEEEEEcccCeeEe
Q psy11015        181 DGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-VLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       181 ~~V~~l~~~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~-l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      +.|.-+.|..+..+ |.....|+.|.+|++...+-...+.....++.+++|+|+|+. +.+...|-.|.||.+.+.... 
T Consensus        49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~-  127 (447)
T KOG4497|consen   49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY-  127 (447)
T ss_pred             HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE-
Confidence            55677788887764 555678889999999988888888888889999999999964 556677899999998765221 


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                                                  -+.--...+..++|+|+|++.+..+
T Consensus       128 ----------------------------~~~~pK~~~kg~~f~~dg~f~ai~s  152 (447)
T KOG4497|consen  128 ----------------------------LLPHPKTNVKGYAFHPDGQFCAILS  152 (447)
T ss_pred             ----------------------------EecccccCceeEEECCCCceeeeee
Confidence                                        1221233567899999999988765

>KOG4497|consensus

Probab=98.79  E-value=3.6e-08  Score=84.87  Aligned_cols=137  Identities=15%  Similarity=0.184  Sum_probs=102.8

Q ss_pred             EEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCCcEEEEEcccCeeEeeeCCCC
Q psy11015        186 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIWQAVINWECLVSNNDN  264 (360)
Q Consensus       186 l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~~i~vwd~~~~~~~~~~~~~~  264 (360)
                      ++|+|+|+++|+++.- .+.|-|..+-+..+.|.. -..|.-|.|..+..+++ ....|+.|.+|++....         
T Consensus        14 c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c-ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpe---------   82 (447)
T KOG4497|consen   14 CSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC-LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPE---------   82 (447)
T ss_pred             eeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH-HHHhhheeeeccceeeeeeeeccceEEEEEeecce---------
Confidence            5799999999999877 777888877654444332 34577788988876654 45778899999986542         


Q ss_pred             CCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEc
Q psy11015        265 DSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR  343 (360)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~  343 (360)
                                         -...+.....++.+++|||+|+.+ .+...|-.|.+|.+.+.+... +......+..++|+
T Consensus        83 -------------------w~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~  142 (447)
T KOG4497|consen   83 -------------------WYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL-LPHPKTNVKGYAFH  142 (447)
T ss_pred             -------------------eEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE-ecccccCceeEEEC
Confidence                               233455567789999999999765 567779999999998876543 34455667999999


Q ss_pred             CCCCEEEccc
Q psy11015        344 TGGPIRASPL  353 (360)
Q Consensus       344 ~~g~~las~~  353 (360)
                      |+|++.|-.+
T Consensus       143 ~dg~f~ai~s  152 (447)
T KOG4497|consen  143 PDGQFCAILS  152 (447)
T ss_pred             CCCceeeeee
Confidence            9999987554

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.79  E-value=8.7e-07  Score=83.92  Aligned_cols=142  Identities=11%  Similarity=0.041  Sum_probs=91.5

Q ss_pred             CCCEEEEEECCCCCEEE-EEeCCC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CC--cEEEEEccc
Q psy11015        180 RDGVWDVAVRPGQPVLG-SASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK--SVHIWQAVI  253 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~-sgs~Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~--~i~vwd~~~  253 (360)
                      .+.+.+.+|+|+|+.|+ +.+.+|  .|.+||+.++... .+..+.+......|+|+|+.++..+. ++  .|.++|+.+
T Consensus       242 ~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~  320 (430)
T PRK00178        242 EGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG  320 (430)
T ss_pred             CCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            34455789999998765 555555  5888899887644 35556666777899999997765543 34  466667655


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-C--cEEEEECCCCeEEEEE
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-R--VANLFDVETGTILQSL  330 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-g--~i~iwd~~~~~~~~~l  330 (360)
                      +..                             ..+...........|+|+|++++..+.+ +  .|.+||+.++.. ..+
T Consensus       321 g~~-----------------------------~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~-~~l  370 (430)
T PRK00178        321 GRA-----------------------------ERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV-RIL  370 (430)
T ss_pred             CCE-----------------------------EEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE-EEc
Confidence            521                             1111111223457899999999776643 3  488899988764 333


Q ss_pred             ecCCCceEEEEEcCCCCEEEccc
Q psy11015        331 TEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      .. ........|+|+|..++-+.
T Consensus       371 t~-~~~~~~p~~spdg~~i~~~~  392 (430)
T PRK00178        371 TD-TSLDESPSVAPNGTMLIYAT  392 (430)
T ss_pred             cC-CCCCCCceECCCCCEEEEEE
Confidence            32 22223568999999877554

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.78  E-value=5.2e-07  Score=82.99  Aligned_cols=129  Identities=16%  Similarity=0.155  Sum_probs=91.0

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCC
Q psy11015        194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKE  273 (360)
Q Consensus       194 ~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  273 (360)
                      ++++-..++.|.|.|..+.+.+..+......-..+.|+|||+++++++.|+.|.++|+.++.                  
T Consensus         8 ~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~------------------   69 (369)
T PF02239_consen    8 FYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGK------------------   69 (369)
T ss_dssp             EEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSS------------------
T ss_pred             EEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCccc------------------
Confidence            34566778999999999999999998654444557899999999999999999999998773                  


Q ss_pred             CCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEecC-------CCceEEEEEcCC
Q psy11015        274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEP-------GEAIRAAAGRTG  345 (360)
Q Consensus       274 ~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h-------~~~v~~~~~~~~  345 (360)
                                .+.++... ....++++++||+++++++ .++.+.++|..+.+.++.+...       ...+.++..+|.
T Consensus        70 ----------~v~~i~~G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~  138 (369)
T PF02239_consen   70 ----------VVATIKVG-GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPG  138 (369)
T ss_dssp             ----------EEEEEE-S-SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SS
T ss_pred             ----------EEEEEecC-CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCC
Confidence                      34445433 3467899999999998775 5899999999999999887643       345678878888


Q ss_pred             CC-EEEc
Q psy11015        346 GP-IRAS  351 (360)
Q Consensus       346 g~-~las  351 (360)
                      .+ ++++
T Consensus       139 ~~~fVv~  145 (369)
T PF02239_consen  139 RPEFVVN  145 (369)
T ss_dssp             SSEEEEE
T ss_pred             CCEEEEE
Confidence            77 4443

...

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.76  E-value=1.4e-06  Score=82.71  Aligned_cols=140  Identities=15%  Similarity=0.099  Sum_probs=87.7

Q ss_pred             CEEEEEECCCCCEEE-EEeCCCc--EEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCc--EEEEEcccCe
Q psy11015        182 GVWDVAVRPGQPVLG-SASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKS--VHIWQAVINW  255 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~-sgs~Dg~--v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~--i~vwd~~~~~  255 (360)
                      .....+|+|+|+.|+ +.+.+|.  |.+||+.+++. ..+..+.......+|+|||+.++..+ .++.  |.++|+.++.
T Consensus       263 ~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~  341 (448)
T PRK04792        263 INGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK  341 (448)
T ss_pred             CcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            344678999999665 4566775  77788887764 34444556677899999999776554 3444  5555665442


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CC--cEEEEECCCCeEEEEEec
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DR--VANLFDVETGTILQSLTE  332 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg--~i~iwd~~~~~~~~~l~~  332 (360)
                                                   ...+..........+|+|+|++++..+. ++  .|.++|+.++.. ..+..
T Consensus       342 -----------------------------~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~-~~lt~  391 (448)
T PRK04792        342 -----------------------------VSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM-QVLTS  391 (448)
T ss_pred             -----------------------------EEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe-EEccC
Confidence                                         1122212222345789999999876654 34  355578877764 33332


Q ss_pred             CCCceEEEEEcCCCCEEEccc
Q psy11015        333 PGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las~~  353 (360)
                      . .......|+|+|..++.+.
T Consensus       392 ~-~~d~~ps~spdG~~I~~~~  411 (448)
T PRK04792        392 T-RLDESPSVAPNGTMVIYST  411 (448)
T ss_pred             C-CCCCCceECCCCCEEEEEE
Confidence            2 1223457999998776544

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.76  E-value=8.6e-07  Score=83.50  Aligned_cols=136  Identities=10%  Similarity=0.079  Sum_probs=90.1

Q ss_pred             CCEEEEEECCCCCEEEEEe-CCCcEEEEE--CCC-CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC---CcEEEEEccc
Q psy11015        181 DGVWDVAVRPGQPVLGSAS-ADRTVRLWS--TQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAVI  253 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs-~Dg~v~iwd--~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d---~~i~vwd~~~  253 (360)
                      +.....+|+|||+.|+..+ .+|...+|.  +.. +.....+..+.+.+....|+|||+.|+..+.+   ..|.+||+.+
T Consensus       281 ~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~  360 (428)
T PRK01029        281 GTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT  360 (428)
T ss_pred             CCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence            4456789999999766555 567656664  432 23344455455667889999999988776543   3688999877


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC---CCcEEEEECCCCeEEEEE
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW---DRVANLFDVETGTILQSL  330 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~---dg~i~iwd~~~~~~~~~l  330 (360)
                      +..                             ..+......+....|+|+|++|+..+.   .+.|.+||+.+++... +
T Consensus       361 g~~-----------------------------~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~-L  410 (428)
T PRK01029        361 GRD-----------------------------YQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRK-I  410 (428)
T ss_pred             CCe-----------------------------EEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-e
Confidence            622                             223322335667899999998864432   3568888988776543 3


Q ss_pred             ecCCCceEEEEEcCCC
Q psy11015        331 TEPGEAIRAAAGRTGG  346 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g  346 (360)
                      ....+.+...+|+|-.
T Consensus       411 t~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        411 VIGSGEKRFPSWGAFP  426 (428)
T ss_pred             ecCCCcccCceecCCC
Confidence            3345567788898754

>KOG1354|consensus

Probab=98.74  E-value=1.9e-07  Score=80.97  Aligned_cols=179  Identities=17%  Similarity=0.166  Sum_probs=114.4

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-----EEEEEeCCC------------cCeEEEEEeeCCC--EEEE
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----CVLQYSGHS------------GSVNSVRFLPNKD--LVLS  239 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-----~~~~~~~h~------------~~v~~i~~~p~~~--~l~s  239 (360)
                      ..+-|.++.|...|++|+||..+|.|.+|.-....     ....++.|.            ..|+.|.|.++++  .++.
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl  103 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL  103 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence            34578999999999999999999999998754322     334455554            3588899998764  6778


Q ss_pred             EeCCCcEEEEEcccCeeEee-eCCCCCC-CCCC-----CCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        240 ASGDKSVHIWQAVINWECLV-SNNDNDS-DLDE-----SKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~-~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                      .+.|++|++|.+........ ....... ....     +............|...+ .+|...|++++++.|+..++++.
T Consensus       104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD  183 (433)
T KOG1354|consen  104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD  183 (433)
T ss_pred             ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc
Confidence            88999999999875432220 0000000 0000     000000111112233333 47889999999999999888765


Q ss_pred             CCCcEEEEECCC-CeEE--EEEecC-----CCceEEEEEcCC--CCEEEcccccchh
Q psy11015        312 WDRVANLFDVET-GTIL--QSLTEP-----GEAIRAAAGRTG--GPIRASPLLLAIR  358 (360)
Q Consensus       312 ~dg~i~iwd~~~-~~~~--~~l~~h-----~~~v~~~~~~~~--g~~las~~~~~ir  358 (360)
                       |=.|.+|++.- .++.  --++.+     ..-|++..|||.  ..++.|++.+.||
T Consensus       184 -dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIr  239 (433)
T KOG1354|consen  184 -DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIR  239 (433)
T ss_pred             -ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEE
Confidence             78899999863 2222  223333     336789999995  3455677788876

>KOG2315|consensus

Probab=98.74  E-value=1.7e-07  Score=86.01  Aligned_cols=130  Identities=20%  Similarity=0.324  Sum_probs=95.2

Q ss_pred             CCCEEEEEECCCCCE--EEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC---CcEEEEEcccC
Q psy11015        180 RDGVWDVAVRPGQPV--LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAVIN  254 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~--l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d---~~i~vwd~~~~  254 (360)
                      .++|.++.|+|++..  ++.|-.=.++.|||++ +..+..+  -.++=+++-|+|.|++++.+|.+   |.+-|||+.+-
T Consensus       270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~  346 (566)
T KOG2315|consen  270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR  346 (566)
T ss_pred             CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccch
Confidence            689999999999974  4446667789999986 5555555  36778899999999999888765   78999998753


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC------CCcEEEEECCCCeEEE
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW------DRVANLFDVETGTILQ  328 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~------dg~i~iwd~~~~~~~~  328 (360)
                                                  +.+..+..  ..-+-+.|+|||.+|+|++.      |..++||+. +|..++
T Consensus       347 ----------------------------K~i~~~~a--~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~  395 (566)
T KOG2315|consen  347 ----------------------------KLIAKFKA--ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLH  395 (566)
T ss_pred             ----------------------------hhcccccc--CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceee
Confidence                                        23333332  23456899999999999874      678999996 466554


Q ss_pred             EEecCCCceEEEEEcC
Q psy11015        329 SLTEPGEAIRAAAGRT  344 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~  344 (360)
                      .-.-.. .+..+.|-|
T Consensus       396 ~~~f~s-EL~qv~W~P  410 (566)
T KOG2315|consen  396 EKMFKS-ELLQVEWRP  410 (566)
T ss_pred             hhhhhH-hHhheeeee
Confidence            332211 567777765

>KOG2066|consensus

Probab=98.73  E-value=2.7e-07  Score=88.12  Aligned_cols=131  Identities=16%  Similarity=0.195  Sum_probs=98.5

Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC-----CCEEEEEeCCCcEEEEEcccCeeEeeeCCC
Q psy11015        189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-----KDLVLSASGDKSVHIWQAVINWECLVSNND  263 (360)
Q Consensus       189 ~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~-----~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~  263 (360)
                      ..+|.+++|||.||+|.|-.+-+++...++. ...++.+|+++|+     .+.+++||..| +.++.-+-          
T Consensus        80 ~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~w----------  147 (846)
T KOG2066|consen   80 ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNW----------  147 (846)
T ss_pred             ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhh----------
Confidence            3468999999999999999999888888777 5678999999997     45789999988 76664321          


Q ss_pred             CCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCce------
Q psy11015        264 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI------  337 (360)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v------  337 (360)
                                     ...+..+ .+....++|.+++|  .|+++|=++.+| +++||+.+++.+..+......+      
T Consensus       148 ---------------lgnk~~v-~l~~~eG~I~~i~W--~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fp  208 (846)
T KOG2066|consen  148 ---------------LGNKDSV-VLSEGEGPIHSIKW--RGNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFP  208 (846)
T ss_pred             ---------------hcCccce-eeecCccceEEEEe--cCcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCC
Confidence                           0111112 45566789999999  689999999887 7999999999888776544433      


Q ss_pred             EEEEEcCCCCEEE
Q psy11015        338 RAAAGRTGGPIRA  350 (360)
Q Consensus       338 ~~~~~~~~g~~la  350 (360)
                      ..+.|.++.+++.
T Consensus       209 phl~W~~~~~LVI  221 (846)
T KOG2066|consen  209 PHLHWQDEDRLVI  221 (846)
T ss_pred             CceEecCCCeEEE
Confidence            3566766555544

>KOG1064|consensus

Probab=98.73  E-value=5.6e-08  Score=99.72  Aligned_cols=153  Identities=17%  Similarity=0.281  Sum_probs=110.1

Q ss_pred             ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015        177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      +.|-..|.++.-+|...+.+||+.||.|++|....+..+..+. +..+.|+.+.|+-+|+.+..+..||.+.+|.+... 
T Consensus      2205 k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk- 2283 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPK- 2283 (2439)
T ss_pred             ecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCc-
Confidence            3455678889999999999999999999999998888777775 23367999999999999999999999999987621 


Q ss_pred             eEeeeCCCCCC--CCCC--------CCCCCCCccc--------cccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEE
Q psy11015        256 ECLVSNNDNDS--DLDE--------SKEPDESSIT--------LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN  317 (360)
Q Consensus       256 ~~~~~~~~~~~--~~~~--------~~~~~~~~~~--------~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~  317 (360)
                      .......+...  ++..        ...+......        ....+.  ..|.+.++++++-|....|++||.+|.|+
T Consensus      2284 ~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~ 2361 (2439)
T KOG1064|consen 2284 PYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVC 2361 (2439)
T ss_pred             ceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEE
Confidence            11111111110  0000        0011111111        111222  67999999999999999999999999999


Q ss_pred             EEECCCCeEEEEEec
Q psy11015        318 LFDVETGTILQSLTE  332 (360)
Q Consensus       318 iwd~~~~~~~~~l~~  332 (360)
                      +||++..+.++++..
T Consensus      2362 l~D~rqrql~h~~~~ 2376 (2439)
T KOG1064|consen 2362 LFDIRQRQLRHTFQA 2376 (2439)
T ss_pred             EeehHHHHHHHHhhh
Confidence            999998877666543

>KOG1334|consensus

Probab=98.72  E-value=4.4e-08  Score=88.30  Aligned_cols=187  Identities=14%  Similarity=0.143  Sum_probs=127.7

Q ss_pred             eeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEe---CCCc---CeEEEEEeeCCC-EEEEEeC
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYS---GHSG---SVNSVRFLPNKD-LVLSASG  242 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~---~h~~---~v~~i~~~p~~~-~l~s~s~  242 (360)
                      .-...+..|.+.|..++.-|+.. .|.|++.|+.|.-.|++.+.+...+.   .+..   ...+|+..|... .+++|+.
T Consensus       223 e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~  302 (559)
T KOG1334|consen  223 ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGS  302 (559)
T ss_pred             ecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCCh
Confidence            33566778999999999999766 79999999999999998875433332   2333   477888888665 8899999


Q ss_pred             CCcEEEEEcccCeeE------eeeCCC---CCCCCCCC----C-CC-------CC----------Ccc------c-cccc
Q psy11015        243 DKSVHIWQAVINWEC------LVSNND---NDSDLDES----K-EP-------DE----------SSI------T-LRTP  284 (360)
Q Consensus       243 d~~i~vwd~~~~~~~------~~~~~~---~~~~~~~~----~-~~-------~~----------~~~------~-~~~~  284 (360)
                      |..+++||.+.-...      .....+   ...+..+.    . .+       .+          ...      . ....
T Consensus       303 dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~  382 (559)
T KOG1334|consen  303 DQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQY  382 (559)
T ss_pred             hhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhc
Confidence            999999997642211      000000   00000000    0 00       00          000      0 0011


Q ss_pred             e-eEeeCCCC--cEEEEEE-cCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        285 V-KELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       285 ~-~~~~~h~~--~v~~i~~-sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      + ..+.||..  .|.++-| -|...|+++||.-|.|.||+-.+++.+.-+.+...-|+|+.-||--++|||+. +..|
T Consensus       383 ~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DV  460 (559)
T KOG1334|consen  383 VKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDV  460 (559)
T ss_pred             cchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccce
Confidence            2 22667754  5667765 58889999999999999999999999999988777899999999999999876 4444

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.68  E-value=2e-06  Score=77.80  Aligned_cols=144  Identities=15%  Similarity=0.167  Sum_probs=112.8

Q ss_pred             ecCCCCEEEEEECCCCCEEEEEeCCC-cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015        177 SGHRDGVWDVAVRPGQPVLGSASADR-TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~~~l~sgs~Dg-~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      .+|.+.|.-..+..+.+-++.|..|| .+-|+|.++++. ..+.+.-+.|.++..+|+|.+++.+.....+.+.|+.++.
T Consensus       356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn  434 (668)
T COG4946         356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN  434 (668)
T ss_pred             cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence            37888898888888888999999999 899999998774 4455567899999999999999998888889999998883


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC----CcEEEEECCCCeEEEEEe
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD----RVANLFDVETGTILQSLT  331 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d----g~i~iwd~~~~~~~~~l~  331 (360)
                      ...                            .=....+-|+.++|+|+++++|-+--+    ..|+++|+.+++....- 
T Consensus       435 v~~----------------------------idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vT-  485 (668)
T COG4946         435 VRL----------------------------IDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVT-  485 (668)
T ss_pred             eeE----------------------------ecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEec-
Confidence            221                            112345679999999999999876544    46999999988765443 


Q ss_pred             cCCCceEEEEEcCCCCEEE
Q psy11015        332 EPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       332 ~h~~~v~~~~~~~~g~~la  350 (360)
                      ...+.=.+-||.|+|+++.
T Consensus       486 T~ta~DfsPaFD~d~ryLY  504 (668)
T COG4946         486 TPTAYDFSPAFDPDGRYLY  504 (668)
T ss_pred             CCcccccCcccCCCCcEEE
Confidence            3344446678999998765

>KOG1240|consensus

Probab=98.61  E-value=5.8e-06  Score=82.65  Aligned_cols=180  Identities=13%  Similarity=0.067  Sum_probs=123.9

Q ss_pred             eeeecCCeEEEeeecCc-----cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC--Ce-----EEEE-
Q psy11015        151 KLKVQTSKIVSSFKTSL-----LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--GK-----CVLQ-  217 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~--~~-----~~~~-  217 (360)
                      ...+++.+.|.+|+...     .+.+...++.--..++.++...+.+..+|.|+.||.|++.+++-  +.     +... 
T Consensus      1064 FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~ 1143 (1431)
T KOG1240|consen 1064 FVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIP 1143 (1431)
T ss_pred             EEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecc
Confidence            45677788888888754     33344555555678899999999999999999999999998764  11     0000 


Q ss_pred             -----------------------------------------------EeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        218 -----------------------------------------------YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       218 -----------------------------------------------~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                                                                     .....|.|++++.+|.++.++.|+..|.+.+||
T Consensus      1144 n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWD 1223 (1431)
T KOG1240|consen 1144 NLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWD 1223 (1431)
T ss_pred             cccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEE
Confidence                                                           011337899999999999999999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCC---CEEEEEE--CCCcEEEEECCCC
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDG---EQVITAS--WDRVANLFDVETG  324 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g---~~l~tgs--~dg~i~iwd~~~~  324 (360)
                      ++-+..                            +... .++..++..+..+|-.   ...++++  ..+.|-+|++.+|
T Consensus      1224 LRF~~~----------------------------i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g 1275 (1431)
T KOG1240|consen 1224 LRFRVP----------------------------ILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETG 1275 (1431)
T ss_pred             eecCce----------------------------eecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccC
Confidence            885522                            2222 1344567766666532   3444443  4688999999999


Q ss_pred             eEEEEEecC--------------------CCceEEEEEcCCCCEEEcccccchh
Q psy11015        325 TILQSLTEP--------------------GEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       325 ~~~~~l~~h--------------------~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      .+-.++...                    -..+.+....++|..+.+++|+.||
T Consensus      1276 ~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR 1329 (1431)
T KOG1240|consen 1276 LRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIR 1329 (1431)
T ss_pred             cceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCcccee
Confidence            776665432                    0123344446677888888899887

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.61  E-value=4.8e-06  Score=85.04  Aligned_cols=170  Identities=17%  Similarity=0.166  Sum_probs=107.8

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEE----ECCCC--eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLW----STQTG--KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iw----d~~~~--~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~  252 (360)
                      ..+.|.++.+-++...++.+..+|-|.+.    +..+.  +.+..   -.+.|.+++||||+.+++..++++++.+-...
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~---vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~  150 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGS---VDSGILAASWSPDEELLALVTGEGNLLLMTRD  150 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEE---EcCcEEEEEECCCcCEEEEEeCCCEEEEEecc
Confidence            34679999999999999999999999998    55443  33443   35689999999999999999999998776421


Q ss_pred             cCeeEeeeCCCCCCCCC-----------CCCCCCC-Ccc-c--cccc------eeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        253 INWECLVSNNDNDSDLD-----------ESKEPDE-SSI-T--LRTP------VKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~-----------~~~~~~~-~~~-~--~~~~------~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                       -...............           ....... +.. .  ...+      ...+. +...-..++|..||.++|+.+
T Consensus       151 -fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss  228 (928)
T PF04762_consen  151 -FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSS  228 (928)
T ss_pred             -ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEE
Confidence             1111111111000000           0000000 000 0  0011      11222 444566899999999999887


Q ss_pred             C---C---CcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        312 W---D---RVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       312 ~---d---g~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      .   +   +.+|||+- .|....+-..-.+--.+++|.|.|+++|++--
T Consensus       229 ~~~~~~~~R~iRVy~R-eG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~  276 (928)
T PF04762_consen  229 VEPETGSRRVIRVYSR-EGELQSTSEPVDGLEGALSWRPSGNLIASSQR  276 (928)
T ss_pred             EEcCCCceeEEEEECC-CceEEeccccCCCccCCccCCCCCCEEEEEEE
Confidence            5   2   57999995 47755554444444467899999999998753

>KOG0309|consensus

Probab=98.57  E-value=2.1e-07  Score=88.09  Aligned_cols=151  Identities=21%  Similarity=0.291  Sum_probs=113.8

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      +...-..+.||...|+.+.|+|..+ .+++++.|-.|..||+++. .++-.+..-...-..|+|+-....+++.+..+.|
T Consensus       103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i  182 (1081)
T KOG0309|consen  103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDI  182 (1081)
T ss_pred             ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCce
Confidence            3345566789999999999999766 8999999999999999876 4555555445566789998766667777888899


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-CCEEEEEECCCcEEEEECCCCe
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      ++||.+.|                           ..++..+.+|...|++++|..- ...+.+.+.||+|+.||.....
T Consensus       183 ~vwd~r~g---------------------------s~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt  235 (1081)
T KOG0309|consen  183 FVWDLRKG---------------------------STPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST  235 (1081)
T ss_pred             EEEeccCC---------------------------CcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence            99999877                           3578889999999999999753 3457889999999999986432


Q ss_pred             --EEEEEecCCCceEEEEEcCCCC
Q psy11015        326 --ILQSLTEPGEAIRAAAGRTGGP  347 (360)
Q Consensus       326 --~~~~l~~h~~~v~~~~~~~~g~  347 (360)
                        .-++. ....+|+.-.+.|-|.
T Consensus       236 ~e~~~~v-tt~~piw~~r~~Pfg~  258 (1081)
T KOG0309|consen  236 TESKRTV-TTNFPIWRGRYLPFGE  258 (1081)
T ss_pred             cccceec-cccCcceeccccccCc
Confidence              22222 2344566555665443

>KOG4714|consensus

Probab=98.56  E-value=2.9e-07  Score=76.92  Aligned_cols=134  Identities=19%  Similarity=0.232  Sum_probs=86.4

Q ss_pred             CCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCe-EEEEEeCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        181 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGK-CVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       181 ~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~-~~~~~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      +.|.+++-+|..+ .+++|+.||.+-+||.+... ++..+..|..+++.+-|+| ++..|++++.||.+.-||..+.-..
T Consensus       180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~~l~  259 (319)
T KOG4714|consen  180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTTFLS  259 (319)
T ss_pred             ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCceEE
Confidence            3499999999654 78889999999999998773 4455778999999999999 5678999999999999998753211


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD  320 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd  320 (360)
                      ...   .......+.... .-.........+......|+++..  -|..+++|+.-+.|++++
T Consensus       260 i~~---~~s~~s~WLsgD-~v~s~i~i~~ll~~~~~SinsfDV--~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  260 ISN---QASVISSWLSGD-PVKSRIEITSLLPSRSLSINSFDV--LGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             ecC---ccccccccccCC-cccceEeeeccccccceeeeeeec--cCceEEeccccceEEEec
Confidence            110   000000000000 000000001111122334666555  588999999888888875

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.53  E-value=1.3e-05  Score=75.30  Aligned_cols=139  Identities=10%  Similarity=0.038  Sum_probs=89.1

Q ss_pred             CEEEEEECCCCCE-EEEEeCC---CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCC--CcEEEEEcccC
Q psy11015        182 GVWDVAVRPGQPV-LGSASAD---RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD--KSVHIWQAVIN  254 (360)
Q Consensus       182 ~V~~l~~~~~~~~-l~sgs~D---g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d--~~i~vwd~~~~  254 (360)
                      .+....|+|+|+. ++..+.+   ..|.++|+.+++...... ..+......|+|||+.++ +.+.+  ..|.++|+.++
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g  267 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK  267 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            6778899999983 6654443   568899998886554443 455667788999998665 44434  45666776655


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CC--cEEEEECCCCeEEEEEe
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DR--VANLFDVETGTILQSLT  331 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg--~i~iwd~~~~~~~~~l~  331 (360)
                      .                             ...+..+........|+|||+.|+-.+. .|  .|.++|+.+++......
T Consensus       268 ~-----------------------------~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~  318 (419)
T PRK04043        268 T-----------------------------LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF  318 (419)
T ss_pred             c-----------------------------EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc
Confidence            2                             2233333333345689999998766553 33  57777888776533222


Q ss_pred             cCCCceEEEEEcCCCCEEEccc
Q psy11015        332 EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       332 ~h~~~v~~~~~~~~g~~las~~  353 (360)
                       ...  ....|+|+|..++-..
T Consensus       319 -~g~--~~~~~SPDG~~Ia~~~  337 (419)
T PRK04043        319 -HGK--NNSSVSTYKNYIVYSS  337 (419)
T ss_pred             -CCC--cCceECCCCCEEEEEE
Confidence             111  1248999999776443

>KOG1064|consensus

Probab=98.52  E-value=4.4e-07  Score=93.42  Aligned_cols=166  Identities=14%  Similarity=0.150  Sum_probs=114.9

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----eE----------E
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----KC----------V  215 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-----~~----------~  215 (360)
                      -+.|..++.+..|.|.....-....-.|. ..|+.+.|+..|+.+..+..||.+.+|.+...     +|          +
T Consensus      2223 Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi 2301 (2439)
T KOG1064|consen 2223 YLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFI 2301 (2439)
T ss_pred             EEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCceeeeccCCceeecccCCcceeccccCCccccceeee
Confidence            34567777778888765433333333344 88889999999999999999999999976521     11          0


Q ss_pred             ----------------------------EEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC
Q psy11015        216 ----------------------------LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSD  267 (360)
Q Consensus       216 ----------------------------~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~  267 (360)
                                                  ..-..|.+.++++++.|.-++|++||.+|.|++||++..             
T Consensus      2302 ~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqr------------- 2368 (2439)
T KOG1064|consen 2302 GSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQR------------- 2368 (2439)
T ss_pred             ehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHH-------------
Confidence                                        011468899999999999999999999999999998743             


Q ss_pred             CCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec-CC-Cce-----EEE
Q psy11015        268 LDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE-PG-EAI-----RAA  340 (360)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~-h~-~~v-----~~~  340 (360)
                                     +..     |.-..    +. ...++++|+..|.++||++.....++++.. |. +.+     ..+
T Consensus      2369 ---------------ql~-----h~~~~----~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~ 2423 (2439)
T KOG1064|consen 2369 ---------------QLR-----HTFQA----LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQI 2423 (2439)
T ss_pred             ---------------HHH-----HHhhh----hh-hhheeeccCcccceEEEEccccchhhcCchhhcccchhhhcCcee
Confidence                           122     22111    44 567999999999999999988777777653 21 000     233


Q ss_pred             EEcCCCCEEEccccc
Q psy11015        341 AGRTGGPIRASPLLL  355 (360)
Q Consensus       341 ~~~~~g~~las~~~~  355 (360)
                      ...+.++++..++|+
T Consensus      2424 ~v~~~nrifsCgad~ 2438 (2439)
T KOG1064|consen 2424 NVGQCNRIFSCGADG 2438 (2439)
T ss_pred             eeccCceEEEecCCC
Confidence            345556666666654

>KOG4532|consensus

Probab=98.52  E-value=9.5e-06  Score=68.38  Aligned_cols=142  Identities=11%  Similarity=-0.036  Sum_probs=101.5

Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEECCCC--eEEEEE-eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        183 VWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~-~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      +.++++++++.++++.+....|..|.++..  ..+..+ ......-.+..|+.....+|+++.||++.|||++.......
T Consensus       161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~  240 (344)
T KOG4532|consen  161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMA  240 (344)
T ss_pred             eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchh
Confidence            788999999999999999999999998643  233322 22333446788998888999999999999999986532211


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC--EEEEEECCCcEEEEECCCCeEEEEEecCC---
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE--QVITASWDRVANLFDVETGTILQSLTEPG---  334 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~--~l~tgs~dg~i~iwd~~~~~~~~~l~~h~---  334 (360)
                                             ....+-..|.+.+..+.|+|.|.  +|+..-.=+.+.+.|++++.-.+.+....   
T Consensus       241 -----------------------~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~  297 (344)
T KOG4532|consen  241 -----------------------EISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVE  297 (344)
T ss_pred             -----------------------hhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCcccc
Confidence                                   12223335899999999998664  44444445789999999988766554322   


Q ss_pred             -----CceEEEEEcCCCC
Q psy11015        335 -----EAIRAAAGRTGGP  347 (360)
Q Consensus       335 -----~~v~~~~~~~~g~  347 (360)
                           ..|....|+.++.
T Consensus       298 ~~~~tq~ifgt~f~~~n~  315 (344)
T KOG4532|consen  298 RKHNTQHIFGTNFNNENE  315 (344)
T ss_pred             ccccccccccccccCCCc
Confidence                 3377777776553

>KOG1832|consensus

Probab=98.52  E-value=1.4e-07  Score=90.95  Aligned_cols=185  Identities=14%  Similarity=0.144  Sum_probs=123.0

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--cE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SV  246 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i  246 (360)
                      .++..++|+.|+..-+|++|+.+.++|+.|+..|.|++|++.+|.....+.+|.++|+.+.-+.+|..+++.+.-.  ..
T Consensus      1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Pls 1169 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLS 1169 (1516)
T ss_pred             hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchH
Confidence            3466778889999999999999999999999999999999999999999999999999999999998877765443  46


Q ss_pred             EEEEcccCeeE-eeeCCCCCCCCCC----------CCCCCCCccccccceeE-ee---CCCCcEEEEEEcCCCCEEEEEE
Q psy11015        247 HIWQAVINWEC-LVSNNDNDSDLDE----------SKEPDESSITLRTPVKE-LL---GHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       247 ~vwd~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~---~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                      .+|++...... ..+..+....+..          ......+...+..++.+ +.   +.+..-+.+.|+|+...++   
T Consensus      1170 aLW~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl--- 1246 (1516)
T KOG1832|consen 1170 ALWDASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL--- 1246 (1516)
T ss_pred             HHhccccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---
Confidence            78987642111 1111110000000          00001112222333333 11   1223346788999888776   


Q ss_pred             CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEcccccchhc
Q psy11015        312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPLLLAIRS  359 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~~~~ir~  359 (360)
                      +||  .+||++..+.++.|......+.. .|||.|+ ++.-+..+.+||
T Consensus      1247 ndG--vLWDvR~~~aIh~FD~ft~~~~G-~FHP~g~eVIINSEIwD~RT 1292 (1516)
T KOG1832|consen 1247 NDG--VLWDVRIPEAIHRFDQFTDYGGG-GFHPSGNEVIINSEIWDMRT 1292 (1516)
T ss_pred             eCc--eeeeeccHHHHhhhhhheecccc-cccCCCceEEeechhhhhHH
Confidence            455  48999988888877655433333 4888886 555566777776

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.49  E-value=1.7e-05  Score=67.68  Aligned_cols=150  Identities=13%  Similarity=0.235  Sum_probs=89.5

Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE-----------------------------------------------
Q psy11015        183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV-----------------------------------------------  215 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~-----------------------------------------------  215 (360)
                      -.-++|+||+.+||.+...|+|++||+-...+.                                               
T Consensus        46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~  125 (282)
T PF15492_consen   46 WRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYL  125 (282)
T ss_pred             heEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEE
Confidence            356889999999999999999999997521110                                               


Q ss_pred             ------------EEEe---CCCcCeEEEEEeeCCCEEEEEeCC-C----------cEEEEEcccCeeEeeeCCCCCCCCC
Q psy11015        216 ------------LQYS---GHSGSVNSVRFLPNKDLVLSASGD-K----------SVHIWQAVINWECLVSNNDNDSDLD  269 (360)
Q Consensus       216 ------------~~~~---~h~~~v~~i~~~p~~~~l~s~s~d-~----------~i~vwd~~~~~~~~~~~~~~~~~~~  269 (360)
                                  .++.   .+...|.++.|+|.-++|+.||.. .          -+..|.+-.+..-............
T Consensus       126 vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~  205 (282)
T PF15492_consen  126 VSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDIT  205 (282)
T ss_pred             EEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCcccc
Confidence                        0000   123468888888877777665431 1          2456666555433322211111110


Q ss_pred             CCCCCCCCccccccceeEe---eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCC
Q psy11015        270 ESKEPDESSITLRTPVKEL---LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~---~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~  334 (360)
                      .. .......... ....+   ......|..+..||||..||+.+.+|.|.+|++.+-.....+..+.
T Consensus       206 ~~-~~~~~~~~~~-~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e  271 (282)
T PF15492_consen  206 AS-SKRRGLLRIP-SFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE  271 (282)
T ss_pred             cc-ccccceeecc-ceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence            00 0000000000 11111   1235689999999999999999999999999999887776665443

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.47  E-value=1.6e-05  Score=72.07  Aligned_cols=132  Identities=14%  Similarity=0.086  Sum_probs=104.9

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC-cEEEEEcccCeeEeeeCCCCCCCCC
Q psy11015        191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK-SVHIWQAVINWECLVSNNDNDSDLD  269 (360)
Q Consensus       191 ~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~-~i~vwd~~~~~~~~~~~~~~~~~~~  269 (360)
                      +|++++..|. |.+.|.+...+-.++.  +|.+.|.-..+..++.-++.|..|| .+-|+|..++               
T Consensus       331 ~Gd~ia~VSR-GkaFi~~~~~~~~iqv--~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~---------------  392 (668)
T COG4946         331 NGDYIALVSR-GKAFIMRPWDGYSIQV--GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGG---------------  392 (668)
T ss_pred             CCcEEEEEec-CcEEEECCCCCeeEEc--CCCCceEEEEEccCCcceEEeccCCceEEEEecCCc---------------
Confidence            4667777765 4666666655544433  4777788888888888899999999 8999999877               


Q ss_pred             CCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEE
Q psy11015        270 ESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIR  349 (360)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~l  349 (360)
                                    .+..+.+.-+.|.+++.+|+|++++.+.....+.+.|+.+|..-..-+...+-|+.++|||+++|+
T Consensus       393 --------------e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~i  458 (668)
T COG4946         393 --------------EVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWI  458 (668)
T ss_pred             --------------eEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeE
Confidence                          455666677889999999999999999999999999999998644444456789999999999999


Q ss_pred             Ecccc
Q psy11015        350 ASPLL  354 (360)
Q Consensus       350 as~~~  354 (360)
                      |-+.-
T Consensus       459 AYafP  463 (668)
T COG4946         459 AYAFP  463 (668)
T ss_pred             EEecC
Confidence            97754

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.47  E-value=7.4e-05  Score=65.71  Aligned_cols=171  Identities=12%  Similarity=0.077  Sum_probs=113.1

Q ss_pred             CeEEEeeecCcc--ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC-CcEEEEECCC-Ce---EEEEEeCCCcC-----
Q psy11015        157 SKIVSSFKTSLL--SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-RTVRLWSTQT-GK---CVLQYSGHSGS-----  224 (360)
Q Consensus       157 ~~~~~~~~~~~~--~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D-g~v~iwd~~~-~~---~~~~~~~h~~~-----  224 (360)
                      ..-+.+|.++..  ....+.....-..+-.-+++++++++++++... |.|.++-++. |.   .+..+. |.+.     
T Consensus        63 ~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~-h~g~~p~~r  141 (346)
T COG2706          63 EGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVK-HTGSGPHER  141 (346)
T ss_pred             cCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeee-cCCCCCCcc
Confidence            344455665543  334443333333344889999999999998764 7899999865 42   223333 6665     


Q ss_pred             -----eEEEEEeeCCCEEEEEeCC-CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEE
Q psy11015        225 -----VNSVRFLPNKDLVLSASGD-KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA  298 (360)
Q Consensus       225 -----v~~i~~~p~~~~l~s~s~d-~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i  298 (360)
                           +....|.|+++++++.... -.|.+|++..|.....                        ....+ .-....+.|
T Consensus       142 Q~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~------------------------~~~~v-~~G~GPRHi  196 (346)
T COG2706         142 QESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPA------------------------DPAEV-KPGAGPRHI  196 (346)
T ss_pred             ccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccc------------------------ccccc-CCCCCcceE
Confidence                 8899999999999887542 3588999986633321                        11122 234567889


Q ss_pred             EEcCCCCEEEEEE-CCCcEEEEECCCC-eEEEEEec---------CCCceEEEEEcCCCCEEEccc
Q psy11015        299 DWLSDGEQVITAS-WDRVANLFDVETG-TILQSLTE---------PGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       299 ~~sp~g~~l~tgs-~dg~i~iwd~~~~-~~~~~l~~---------h~~~v~~~~~~~~g~~las~~  353 (360)
                      .|+|++++....+ .+++|-+|..... ..+..+..         ......++..+++|++|..+.
T Consensus       197 ~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasN  262 (346)
T COG2706         197 VFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASN  262 (346)
T ss_pred             EEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEec
Confidence            9999999987655 5899999998763 22222221         133567788899999988765

>KOG1409|consensus

Probab=98.46  E-value=3.3e-06  Score=73.42  Aligned_cols=130  Identities=20%  Similarity=0.337  Sum_probs=104.0

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----------------------------------
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----------------------------------  212 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-----------------------------------  212 (360)
                      ......+.+..|...|..+-|+-....+++.+.|..+.---.+.+                                   
T Consensus       102 nkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr  181 (404)
T KOG1409|consen  102 NKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLK  181 (404)
T ss_pred             hhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEE
Confidence            444567788899999999999988889999998876642111111                                   


Q ss_pred             ------eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccccee
Q psy11015        213 ------KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVK  286 (360)
Q Consensus       213 ------~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (360)
                            ..+..+.+|.+.+.+++|.|....+.+|..|..+.+||+-...                           ....
T Consensus       182 ~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~---------------------------g~~~  234 (404)
T KOG1409|consen  182 LEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRK---------------------------GTAY  234 (404)
T ss_pred             EeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCc---------------------------ceee
Confidence                  1234567899999999999999999999999999999986441                           2356


Q ss_pred             EeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        287 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       287 ~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      .+.+|...|..+...+--+.+++++.||.|.+|++...
T Consensus       235 el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~  272 (404)
T KOG1409|consen  235 ELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVK  272 (404)
T ss_pred             eeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccce
Confidence            77899999999988888889999999999999998743

>KOG4532|consensus

Probab=98.45  E-value=1.6e-05  Score=67.04  Aligned_cols=129  Identities=14%  Similarity=0.032  Sum_probs=91.7

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCC
Q psy11015        194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKE  273 (360)
Q Consensus       194 ~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  273 (360)
                      -+..++.|.++++.+++-+.......-..-.+.++.++++++++++.+....|..|.+....+-..              
T Consensus       130 ~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~--------------  195 (344)
T KOG4532|consen  130 PLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIE--------------  195 (344)
T ss_pred             ceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceee--------------
Confidence            577788999999998875533222221112388999999999999999999999998865422211              


Q ss_pred             CCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE-----EEecCCCceEEEEEcCCCC
Q psy11015        274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ-----SLTEPGEAIRAAAGRTGGP  347 (360)
Q Consensus       274 ~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~-----~l~~h~~~v~~~~~~~~g~  347 (360)
                                 -.....-+..=.+..|+.....+|++..||++.|||++......     +-..|.+++..+.|++.|.
T Consensus       196 -----------~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~  263 (344)
T KOG4532|consen  196 -----------NIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGL  263 (344)
T ss_pred             -----------eeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCc
Confidence                       01122223334567899899999999999999999998653322     2235899999999998764

>KOG1354|consensus

Probab=98.45  E-value=1.4e-06  Score=75.59  Aligned_cols=170  Identities=11%  Similarity=0.186  Sum_probs=114.2

Q ss_pred             eeeee-ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-E--EEEEeCC-----CcCeEEEEEeeC-CCEEEEEe
Q psy11015        172 KIRSF-SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-C--VLQYSGH-----SGSVNSVRFLPN-KDLVLSAS  241 (360)
Q Consensus       172 ~~~~l-~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-~--~~~~~~h-----~~~v~~i~~~p~-~~~l~s~s  241 (360)
                      +.+.+ .+|+--|++++++.|+..++|+. |-.|.+|+++-.. +  +..++.+     +..|++..|+|. .+.|+-++
T Consensus       155 prRv~aNaHtyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSS  233 (433)
T KOG1354|consen  155 PRRVYANAHTYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSS  233 (433)
T ss_pred             eeeeccccceeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEec
Confidence            34444 46888999999999998777664 6789999987432 1  2223333     245888999995 45777788


Q ss_pred             CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        242 GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      ..|+|++-|++....|.....-.    ..+..        +....-+.+--+.|..+.|+++|+|+++-+. -+|++||+
T Consensus       234 SKGtIrLcDmR~~aLCd~hsKlf----Eeped--------p~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~  300 (433)
T KOG1354|consen  234 SKGTIRLCDMRQSALCDAHSKLF----EEPED--------PSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDL  300 (433)
T ss_pred             CCCcEEEeechhhhhhcchhhhh----ccccC--------CcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEec
Confidence            99999999998665443211100    00000        0011112223356889999999999998765 68999999


Q ss_pred             -CCCeEEEEEecCC------------Cce---EEEEEcCCCCEEEccccc
Q psy11015        322 -ETGTILQSLTEPG------------EAI---RAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       322 -~~~~~~~~l~~h~------------~~v---~~~~~~~~g~~las~~~~  355 (360)
                       ...+++.+..-|.            ..|   ..++|+.++.+++||+..
T Consensus       301 nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~  350 (433)
T KOG1354|consen  301 NMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYN  350 (433)
T ss_pred             cccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEeccccc
Confidence             4566777776552            223   458899999999998864

>KOG3914|consensus

Probab=98.43  E-value=4.2e-06  Score=74.13  Aligned_cols=150  Identities=12%  Similarity=0.098  Sum_probs=102.7

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe----EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~----~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      .++.+.+++++.+||.+..++...++++....    ++..+. -...-+++.|..+...+..+...|.++-+|+-...  
T Consensus        64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~--  140 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSAD--  140 (390)
T ss_pred             cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeeccc--
Confidence            34455677788888888777776666665332    222222 22334455565555555444444444444332210  


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe-cCCCc
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEA  336 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~-~h~~~  336 (360)
                                             . .+.....||-+.++.++|+||+++|+|+..|..|++-....--.+..+. ||..-
T Consensus       141 -----------------------~-~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eF  196 (390)
T KOG3914|consen  141 -----------------------S-GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEF  196 (390)
T ss_pred             -----------------------c-cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhh
Confidence                                   0 1234456899999999999999999999999999999887666666654 69999


Q ss_pred             eEEEEEcCCCCEEEcccccchh
Q psy11015        337 IRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       337 v~~~~~~~~g~~las~~~~~ir  358 (360)
                      |..++.-++..++.++.|.++|
T Consensus       197 VS~isl~~~~~LlS~sGD~tlr  218 (390)
T KOG3914|consen  197 VSTISLTDNYLLLSGSGDKTLR  218 (390)
T ss_pred             eeeeeeccCceeeecCCCCcEE
Confidence            9999999999988899998876

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.41  E-value=2.7e-05  Score=68.27  Aligned_cols=174  Identities=16%  Similarity=0.145  Sum_probs=107.8

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeC-----CCcEEEEECC-CCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-----
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASA-----DRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-----  242 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~-----Dg~v~iwd~~-~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-----  242 (360)
                      +.|.||      -.|+++|++|++.-.     .|.|-|||.. +.+.+..|..|.-....+.+.|||..|+.+-.     
T Consensus        50 RHFyGH------g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Th  123 (305)
T PF07433_consen   50 RHFYGH------GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETH  123 (305)
T ss_pred             CEEecC------EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccC
Confidence            445555      479999999988644     4789999999 66889999988877889999999977766522     


Q ss_pred             -------------CCcEEEEEcccCeeEeeeCCC----CCCCCCCCCCCC-------------------CCcccccccee
Q psy11015        243 -------------DKSVHIWQAVINWECLVSNND----NDSDLDESKEPD-------------------ESSITLRTPVK  286 (360)
Q Consensus       243 -------------d~~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~-------------------~~~~~~~~~~~  286 (360)
                                   +..+.+.|..+|....+....    ..+.-.......                   .........+.
T Consensus       124 pd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~  203 (305)
T PF07433_consen  124 PDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALR  203 (305)
T ss_pred             cccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcce
Confidence                         122334455555443332221    000000000000                   00000011111


Q ss_pred             Ee-------eCCCCcEEEEEEcCCCCEE-EEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        287 EL-------LGHSNVVIAADWLSDGEQV-ITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       287 ~~-------~~h~~~v~~i~~sp~g~~l-~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      .+       ....+.+-+|+++++|.++ +|+-..+.+.+||..++..+....-.  .+..++..+++ +++|+..+.
T Consensus       204 ~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~--D~cGva~~~~~-f~~ssG~G~  278 (305)
T PF07433_consen  204 LLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP--DACGVAPTDDG-FLVSSGQGQ  278 (305)
T ss_pred             eccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccC--ceeeeeecCCc-eEEeCCCcc
Confidence            11       1234678999999999887 55566788999999999988776543  46777777777 666655544

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.41  E-value=0.00021  Score=65.53  Aligned_cols=173  Identities=17%  Similarity=0.167  Sum_probs=110.7

Q ss_pred             CeEEEeeecCc--cceeeeeeeecCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCC-CeEEEE---Ee----------
Q psy11015        157 SKIVSSFKTSL--LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQT-GKCVLQ---YS----------  219 (360)
Q Consensus       157 ~~~~~~~~~~~--~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~-~~~~~~---~~----------  219 (360)
                      ...+.+|....  .....+.+..........++++|++.+|+++.. +|+|.++++.. |.....   +.          
T Consensus        61 ~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~r  140 (345)
T PF10282_consen   61 SGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDR  140 (345)
T ss_dssp             TTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTT
T ss_pred             CCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccc
Confidence            34555555544  455566666544556678999999998888875 89999999986 433222   21          


Q ss_pred             CCCcCeEEEEEeeCCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEE
Q psy11015        220 GHSGSVNSVRFLPNKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIA  297 (360)
Q Consensus       220 ~h~~~v~~i~~~p~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~  297 (360)
                      .......++.|+|+|+++++... ...|.+|++.......                        .+...+. ......+.
T Consensus       141 q~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l------------------------~~~~~~~~~~G~GPRh  196 (345)
T PF10282_consen  141 QEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKL------------------------TPVDSIKVPPGSGPRH  196 (345)
T ss_dssp             TSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TE------------------------EEEEEEECSTTSSEEE
T ss_pred             cccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceE------------------------EEeeccccccCCCCcE
Confidence            12245789999999998877643 4579999987552110                        0112222 33456889


Q ss_pred             EEEcCCCCEEEEEE-CCCcEEEEECC--CCeE--EEEEecC------CCceEEEEEcCCCCEEEccc
Q psy11015        298 ADWLSDGEQVITAS-WDRVANLFDVE--TGTI--LQSLTEP------GEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       298 i~~sp~g~~l~tgs-~dg~i~iwd~~--~~~~--~~~l~~h------~~~v~~~~~~~~g~~las~~  353 (360)
                      ++|+|+|++++..+ .++.|.+|++.  ++..  +..+...      ......++++|+|+++..+.
T Consensus       197 ~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsn  263 (345)
T PF10282_consen  197 LAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSN  263 (345)
T ss_dssp             EEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEE
T ss_pred             EEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEe
Confidence            99999999986654 57889999987  5532  3333211      12578899999999877654

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2041|consensus

Probab=98.41  E-value=2.7e-06  Score=80.45  Aligned_cols=140  Identities=14%  Similarity=0.149  Sum_probs=103.8

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---------------EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---------------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---------------~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      .....|++|+....+++.||.||.++|-.+.+..               .-+++.||.+.|.-+.|+...+.+-++..+|
T Consensus        14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G   93 (1189)
T KOG2041|consen   14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG   93 (1189)
T ss_pred             CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence            4567899999999999999999999998876431               2356789999999999998888999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      .|.||-+-.|.-+                          .-..-....+.|.+++|+.+|..+...-.||.|.+=.+. |
T Consensus        94 lIiVWmlykgsW~--------------------------EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd-G  146 (1189)
T KOG2041|consen   94 LIIVWMLYKGSWC--------------------------EEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD-G  146 (1189)
T ss_pred             eEEEEeeecccHH--------------------------HHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec-c
Confidence            9999987665211                          111112345678999999999999999999988776654 3


Q ss_pred             eEE--EEEecCCCceEEEEEcCCCCE
Q psy11015        325 TIL--QSLTEPGEAIRAAAGRTGGPI  348 (360)
Q Consensus       325 ~~~--~~l~~h~~~v~~~~~~~~g~~  348 (360)
                      ..+  +.+++  .....+.|++|...
T Consensus       147 NRIwgKeLkg--~~l~hv~ws~D~~~  170 (1189)
T KOG2041|consen  147 NRIWGKELKG--QLLAHVLWSEDLEQ  170 (1189)
T ss_pred             ceecchhcch--heccceeecccHHH
Confidence            222  23332  23456778877543

>KOG4714|consensus

Probab=98.40  E-value=5.9e-07  Score=75.16  Aligned_cols=143  Identities=16%  Similarity=0.137  Sum_probs=88.4

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeC-----CCcEEEEECCCCeEEEEEeCCCcCeEE
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-----DRTVRLWSTQTGKCVLQYSGHSGSVNS  227 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-----Dg~v~iwd~~~~~~~~~~~~h~~~v~~  227 (360)
                      .+.....+.++.... ..+..+.+..-...-.+.+....++++.+++.     -+..++|+++..+.+..-..-...|.+
T Consensus       106 ~~~~dg~~~v~s~~~-~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~  184 (319)
T KOG4714|consen  106 IGYADGSLAVFSTDK-DLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTA  184 (319)
T ss_pred             ecCCCceEEEEechH-HHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccccccchh
Confidence            344444444444443 23333333222222223333444555555432     234556666544322222212234899


Q ss_pred             EEEeeCC-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCC
Q psy11015        228 VRFLPNK-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGE  305 (360)
Q Consensus       228 i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~  305 (360)
                      ++-+|.. .++++|+.||.+-+||.+..                           ..|...+..|...++.+.|+| ++.
T Consensus       185 l~~hp~qq~~v~cgt~dg~~~l~d~rn~---------------------------~~p~S~l~ahk~~i~eV~FHpk~p~  237 (319)
T KOG4714|consen  185 LCSHPAQQHLVCCGTDDGIVGLWDARNV---------------------------AMPVSLLKAHKAEIWEVHFHPKNPE  237 (319)
T ss_pred             hhCCcccccEEEEecCCCeEEEEEcccc---------------------------cchHHHHHHhhhhhhheeccCCCch
Confidence            9999855 46778889999999998865                           125666788999999999999 567


Q ss_pred             EEEEEECCCcEEEEECCC
Q psy11015        306 QVITASWDRVANLFDVET  323 (360)
Q Consensus       306 ~l~tgs~dg~i~iwd~~~  323 (360)
                      .|+|++.||.+..||..+
T Consensus       238 ~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  238 HLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             heeEecCCCcEEEEcCCC
Confidence            899999999999999763

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.40  E-value=2.5e-05  Score=81.28  Aligned_cols=166  Identities=15%  Similarity=0.149  Sum_probs=101.6

Q ss_pred             EEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeCC---------------CcCeEEEEEeeCCC-EEEEEeCCCc
Q psy11015        183 VWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGH---------------SGSVNSVRFLPNKD-LVLSASGDKS  245 (360)
Q Consensus       183 V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h---------------~~~v~~i~~~p~~~-~l~s~s~d~~  245 (360)
                      -++++|+| ++.++++.+.++.|++||..++... .+.+.               -.....|+|+|++. ++++.+.++.
T Consensus       685 P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~  763 (1057)
T PLN02919        685 PWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSS  763 (1057)
T ss_pred             CeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCe
Confidence            36789999 5667777788899999999877542 22111               12356799999988 5556677899


Q ss_pred             EEEEEcccCeeEeeeCCCC-CCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        246 VHIWQAVINWECLVSNNDN-DSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      |++||+.++.......... .............   ..  ..   ..-....+++++++|+.+++-+.++.|++||..++
T Consensus       764 Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG---~g--~~---~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg  835 (1057)
T PLN02919        764 IRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDG---VG--SE---VLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATK  835 (1057)
T ss_pred             EEEEECCCCcEEEEEecccccCcccccccCCCC---ch--hh---hhccCCceeeEeCCCcEEEEECCCCEEEEEECCCC
Confidence            9999998764322110000 0000000000000   00  00   01112457899999998888889999999999887


Q ss_pred             eEEEEEecC--------------CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        325 TILQSLTEP--------------GEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       325 ~~~~~l~~h--------------~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ...... +.              -.....++++++|+++++.. .+.||
T Consensus       836 ~v~tia-G~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Ir  883 (1057)
T PLN02919        836 RVTTLA-GTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIR  883 (1057)
T ss_pred             eEEEEe-ccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEE
Confidence            654332 21              12467899999999766654 34443

>KOG2314|consensus

Probab=98.40  E-value=1.1e-05  Score=74.51  Aligned_cols=84  Identities=19%  Similarity=0.253  Sum_probs=57.7

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeC-----------CCcEEEEECCCCeEEEEEeCC--CcCeE-EEEEe
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-----------DRTVRLWSTQTGKCVLQYSGH--SGSVN-SVRFL  231 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-----------Dg~v~iwd~~~~~~~~~~~~h--~~~v~-~i~~~  231 (360)
                      ...+...++.|. | -.|.-+.|||..++|+|=|.           ...++|||+.+|...+.|...  ...++ -+.||
T Consensus       237 GG~~f~r~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS  314 (698)
T KOG2314|consen  237 GGESFDRIQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWS  314 (698)
T ss_pred             cCccHHHHHhcc-C-CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEec
Confidence            334444444442 3 24677899999999999764           257899999999888887652  22233 46789


Q ss_pred             eCCCEEEEEeCCCcEEEEEcc
Q psy11015        232 PNKDLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~  252 (360)
                      -|+.++|-...| .|.||+..
T Consensus       315 ~DdKy~Arm~~~-sisIyEtp  334 (698)
T KOG2314|consen  315 HDDKYFARMTGN-SISIYETP  334 (698)
T ss_pred             cCCceeEEeccc-eEEEEecC
Confidence            899998877664 46677654

>KOG2041|consensus

Probab=98.39  E-value=5.5e-06  Score=78.51  Aligned_cols=185  Identities=16%  Similarity=0.201  Sum_probs=117.6

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE--eCCCcCeEEEEEeeCCCEEEEEeCCCcEE-
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY--SGHSGSVNSVRFLPNKDLVLSASGDKSVH-  247 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~--~~h~~~v~~i~~~p~~~~l~s~s~d~~i~-  247 (360)
                      ..-+++.||.+.|.-+.|+...+.|-|...+|.|.||-+-.|.-....  ....+.|.+++|+.+|..++..-.||.|. 
T Consensus        62 smNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV  141 (1189)
T KOG2041|consen   62 SMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV  141 (1189)
T ss_pred             chhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence            445789999999999999999999999999999999998766422221  12345688999999998877777777664 


Q ss_pred             -------EEEcccC----------------------eeEeeeCCCC--------CC-C---CCCC-----------CCCC
Q psy11015        248 -------IWQAVIN----------------------WECLVSNNDN--------DS-D---LDES-----------KEPD  275 (360)
Q Consensus       248 -------vwd~~~~----------------------~~~~~~~~~~--------~~-~---~~~~-----------~~~~  275 (360)
                             +|.-.-.                      .++..+....        .. .   ....           ....
T Consensus       142 GsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~  221 (1189)
T KOG2041|consen  142 GSVDGNRIWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGP  221 (1189)
T ss_pred             EeeccceecchhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCc
Confidence                   4532100                      0000000000        00 0   0000           0000


Q ss_pred             CCcccccccee--------------------EeeCCCCcEEEEEEcCCCCEEEEEECC---------CcEEEEECCCCeE
Q psy11015        276 ESSITLRTPVK--------------------ELLGHSNVVIAADWLSDGEQVITASWD---------RVANLFDVETGTI  326 (360)
Q Consensus       276 ~~~~~~~~~~~--------------------~~~~h~~~v~~i~~sp~g~~l~tgs~d---------g~i~iwd~~~~~~  326 (360)
                      .......+|..                    .+..-.-.+..+.|+++|..|+.++.|         ..|++|. .-|..
T Consensus       222 ~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i  300 (1189)
T KOG2041|consen  222 YQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHI  300 (1189)
T ss_pred             cccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEec-cchhh
Confidence            00000000100                    000111357889999999999988754         3567776 45888


Q ss_pred             EEEEecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        327 LQSLTEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       327 ~~~l~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      +.+++.++..|++++|-..|..+|-+.|+.
T Consensus       301 ~gtlkvpg~~It~lsWEg~gLriA~Avdsf  330 (1189)
T KOG2041|consen  301 VGTLKVPGSCITGLSWEGTGLRIAIAVDSF  330 (1189)
T ss_pred             eEEEecCCceeeeeEEcCCceEEEEEecce
Confidence            999999999999999999999888887754

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.36  E-value=0.00048  Score=59.92  Aligned_cols=165  Identities=16%  Similarity=0.130  Sum_probs=107.3

Q ss_pred             ecCccceeeeeeee--c-CCCCEEEEEECCCCCEEEEEeCC--------CcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015        164 KTSLLSCYKIRSFS--G-HRDGVWDVAVRPGQPVLGSASAD--------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       164 ~~~~~~~~~~~~l~--~-h~~~V~~l~~~~~~~~l~sgs~D--------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      .........+....  . .....+.+++.|+|++.++....        |.|..++.. ++...... .-...+.|+|+|
T Consensus        66 d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~  143 (246)
T PF08450_consen   66 DPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSP  143 (246)
T ss_dssp             ETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEET
T ss_pred             ecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECC
Confidence            43444444444442  2 34567899999999987776644        457777777 55444444 356679999999


Q ss_pred             CCCEEE-EEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        233 NKDLVL-SASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       233 ~~~~l~-s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                      +++.|+ +-+..+.|..+++.......                     ........+....+..-.+++..+|+..++..
T Consensus       144 dg~~lyv~ds~~~~i~~~~~~~~~~~~---------------------~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~  202 (246)
T PF08450_consen  144 DGKTLYVADSFNGRIWRFDLDADGGEL---------------------SNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW  202 (246)
T ss_dssp             TSSEEEEEETTTTEEEEEEEETTTCCE---------------------EEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE
T ss_pred             cchheeecccccceeEEEeccccccce---------------------eeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc
Confidence            998665 56777888888886431100                     01112223333334588899999999888888


Q ss_pred             CCCcEEEEECCCCeEEEEEecCCCceEEEEEc-CC-CCEEEcc
Q psy11015        312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGR-TG-GPIRASP  352 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~-~~-g~~las~  352 (360)
                      ..+.|.++|.. |+.+..+......+++++|- ++ ..+++|+
T Consensus       203 ~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  203 GGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             TTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred             CCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence            88999999977 99888888776689999994 44 3444444

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.36  E-value=5.4e-05  Score=71.07  Aligned_cols=141  Identities=11%  Similarity=0.026  Sum_probs=86.7

Q ss_pred             CCCCEEEEEECCCCCEEE-EEeCC--CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCC--cEEEEEcc
Q psy11015        179 HRDGVWDVAVRPGQPVLG-SASAD--RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDK--SVHIWQAV  252 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~-sgs~D--g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~--~i~vwd~~  252 (360)
                      ..+.+.+..|+|||..++ +.+.+  ..|.++|+.++.. ..+..+.+......|+|||+.|+-.+ ..+  .|.+.|+.
T Consensus       231 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~  309 (419)
T PRK04043        231 SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLN  309 (419)
T ss_pred             CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECC
Confidence            445566778999998554 44444  4577778877764 33443444344668999998666554 334  46666766


Q ss_pred             cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---------CcEEEEECCC
Q psy11015        253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---------RVANLFDVET  323 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---------g~i~iwd~~~  323 (360)
                      ++..                             ..+......  ...|+|+|++++-.+..         ..|.+.|+.+
T Consensus       310 ~g~~-----------------------------~rlt~~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~  358 (419)
T PRK04043        310 SGSV-----------------------------EQVVFHGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNS  358 (419)
T ss_pred             CCCe-----------------------------EeCccCCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCC
Confidence            5521                             111111111  24899999998766543         2578889887


Q ss_pred             CeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        324 GTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       324 ~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +.. ..+... .......|+|||..++-..
T Consensus       359 g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~  386 (419)
T PRK04043        359 DYI-RRLTAN-GVNQFPRFSSDGGSIMFIK  386 (419)
T ss_pred             CCe-EECCCC-CCcCCeEECCCCCEEEEEE
Confidence            764 444433 2333578999998776544

>KOG1912|consensus

Probab=98.35  E-value=6e-06  Score=78.88  Aligned_cols=133  Identities=16%  Similarity=0.187  Sum_probs=104.1

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC------------CEEEEEeCCCcEEEE
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK------------DLVLSASGDKSVHIW  249 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~------------~~l~s~s~d~~i~vw  249 (360)
                      --.++.|+|.| +++.|+-. .|.|-|..+.+.+..+.-|...|+.+.|.|-.            -+++++...|.|.+|
T Consensus        17 N~~A~Dw~~~G-LiAygshs-lV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~   94 (1062)
T KOG1912|consen   17 NRNAADWSPSG-LIAYGSHS-LVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILV   94 (1062)
T ss_pred             cccccccCccc-eEEEecCc-eEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEE
Confidence            35678899988 77777654 78888999999999999999999999999831            156777888999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC---CC-CEEEEEECCCcEEEEECCCCe
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS---DG-EQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp---~g-~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      |...+                            ..+..+..|..++..++|-|   +. ..++.-....++.+|+..+|+
T Consensus        95 d~~~~----------------------------s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~  146 (1062)
T KOG1912|consen   95 DFVLA----------------------------SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGE  146 (1062)
T ss_pred             Eehhh----------------------------hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCc
Confidence            98765                            23455667888889999875   44 456666677899999999999


Q ss_pred             EEEEEecCCCceEEEEEcC
Q psy11015        326 ILQSLTEPGEAIRAAAGRT  344 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~  344 (360)
                      .+...........|+.+.|
T Consensus       147 k~Wk~~ys~~iLs~f~~DP  165 (1062)
T KOG1912|consen  147 KFWKYDYSHEILSCFRVDP  165 (1062)
T ss_pred             eeeccccCCcceeeeeeCC
Confidence            8877766556666677776

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.35  E-value=0.00032  Score=64.35  Aligned_cols=169  Identities=15%  Similarity=0.137  Sum_probs=106.9

Q ss_pred             eEEEeeec--CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeC----CCcEEEEECCC--Ce--EEEEEeCCCcCeEE
Q psy11015        158 KIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA----DRTVRLWSTQT--GK--CVLQYSGHSGSVNS  227 (360)
Q Consensus       158 ~~~~~~~~--~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~----Dg~v~iwd~~~--~~--~~~~~~~h~~~v~~  227 (360)
                      .-+..|..  .......+..+. -......++++|++++|+++..    ++.|..|.+..  +.  .+............
T Consensus        13 ~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~   91 (345)
T PF10282_consen   13 GGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCH   91 (345)
T ss_dssp             TEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEE
T ss_pred             CcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEE
Confidence            33443444  444444455533 3344566889999999998877    56899888865  33  33444434456778


Q ss_pred             EEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee----------CCCCcEE
Q psy11015        228 VRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL----------GHSNVVI  296 (360)
Q Consensus       228 i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~h~~~v~  296 (360)
                      ++++|++++++++. .+|.+.++++........                        ....+.          .-.....
T Consensus        92 i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~------------------------~~~~~~~~g~g~~~~rq~~~h~H  147 (345)
T PF10282_consen   92 IAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGE------------------------VVQTVRHEGSGPNPDRQEGPHPH  147 (345)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTSEEEE------------------------EEEEEESEEEESSTTTTSSTCEE
T ss_pred             EEEecCCCEEEEEEccCCeEEEEEccCCcccce------------------------eeeecccCCCCCcccccccccce
Confidence            99999999998887 488999999986422211                        111110          1234577


Q ss_pred             EEEEcCCCCEEEEEEC-CCcEEEEECCCCe--E--EEEEe-cCCCceEEEEEcCCCCEEEc
Q psy11015        297 AADWLSDGEQVITASW-DRVANLFDVETGT--I--LQSLT-EPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       297 ~i~~sp~g~~l~tgs~-dg~i~iwd~~~~~--~--~~~l~-~h~~~v~~~~~~~~g~~las  351 (360)
                      ++.|+|+|+++++... ...|.+|++....  .  ...+. .....-..++|+|+|+++..
T Consensus       148 ~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv  208 (345)
T PF10282_consen  148 QVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYV  208 (345)
T ss_dssp             EEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEE
T ss_pred             eEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEE
Confidence            8999999999887654 3569999987654  3  22332 34567799999999986653

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.35  E-value=3.2e-05  Score=72.30  Aligned_cols=75  Identities=15%  Similarity=0.191  Sum_probs=63.9

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      .....|.|++++|+...++.|+.||+|++||...+.....  ...-.+..++|||+|..+++|+..|.+.+||+.-+
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            4677899999999999999999999999999877633322  23445789999999999999999999999998755

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.33  E-value=3.4e-05  Score=72.11  Aligned_cols=108  Identities=17%  Similarity=0.189  Sum_probs=77.9

Q ss_pred             EEEEECCC-CCEEEEE----eCCCcE----EEEECCCCeE--E--EEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        184 WDVAVRPG-QPVLGSA----SADRTV----RLWSTQTGKC--V--LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       184 ~~l~~~~~-~~~l~sg----s~Dg~v----~iwd~~~~~~--~--~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      .++.|+.. ...+.|-    +.+|.+    .+|++..++.  +  ..+ ...+.|.+++++|+...++.|+.||.|.+||
T Consensus       209 l~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsi-pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD  287 (545)
T PF11768_consen  209 LDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSI-PLPSQVICCARSPSEDKLVLGCEDGSIILYD  287 (545)
T ss_pred             EEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEE-ecCCcceEEecCcccceEEEEecCCeEEEEE
Confidence            55666653 3344443    344543    3566654431  1  222 3678899999999999999999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      ...+                              +..+....-.++.++|+|+|..+++|+..|.+.+||+.
T Consensus       288 ~~~~------------------------------~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A  329 (545)
T PF11768_consen  288 TTRG------------------------------VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA  329 (545)
T ss_pred             cCCC------------------------------eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence            8765                              22233334457889999999999999999999999976

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.27  E-value=3.1e-05  Score=80.63  Aligned_cols=129  Identities=12%  Similarity=0.144  Sum_probs=86.7

Q ss_pred             EEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeC-------------C--------CcCeEEEEEeeCCCEEEEE
Q psy11015        183 VWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSG-------------H--------SGSVNSVRFLPNKDLVLSA  240 (360)
Q Consensus       183 V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~-------------h--------~~~v~~i~~~p~~~~l~s~  240 (360)
                      .+.|+++|++. ++++-+.++.|++||+.++.......+             +        -.....++|+++|.++++-
T Consensus       742 P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVAD  821 (1057)
T PLN02919        742 PSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVAD  821 (1057)
T ss_pred             ccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEE
Confidence            45689999988 555666779999999987643211100             0        1134689999999999999


Q ss_pred             eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy11015        241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD  320 (360)
Q Consensus       241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd  320 (360)
                      +.+++|++||..++...... .....     .. .+     +   ....++-.....++++++|+.+++-+.++.|++||
T Consensus       822 s~N~rIrviD~~tg~v~tia-G~G~~-----G~-~d-----G---~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid  886 (1057)
T PLN02919        822 SYNHKIKKLDPATKRVTTLA-GTGKA-----GF-KD-----G---KALKAQLSEPAGLALGENGRLFVADTNNSLIRYLD  886 (1057)
T ss_pred             CCCCEEEEEECCCCeEEEEe-ccCCc-----CC-CC-----C---cccccccCCceEEEEeCCCCEEEEECCCCEEEEEE
Confidence            99999999999876433211 00000     00 00     0   00122234567899999999888888999999999


Q ss_pred             CCCCeE
Q psy11015        321 VETGTI  326 (360)
Q Consensus       321 ~~~~~~  326 (360)
                      +.++..
T Consensus       887 ~~~~~~  892 (1057)
T PLN02919        887 LNKGEA  892 (1057)
T ss_pred             CCCCcc
Confidence            998764

>KOG1275|consensus

Probab=98.26  E-value=2.2e-05  Score=76.50  Aligned_cols=149  Identities=16%  Similarity=0.159  Sum_probs=103.5

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC----
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----  243 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d----  243 (360)
                      .+.+..+...--.+.|.-|+.+  ++++++|...|+|.+-|..+-+.++++.+|++.|.++..  .|++|++||..    
T Consensus       165 ~~~~e~r~~~v~a~~v~imR~N--nr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~  240 (1118)
T KOG1275|consen  165 NTEKETRTTNVSASGVTIMRYN--NRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRY  240 (1118)
T ss_pred             ccceeeeeeeccCCceEEEEec--CcEEEeecccceEEeecCCcCceeeeeeccccceeeeec--cCCeEEEeecccccc
Confidence            3344444444444456555554  679999999999999999999999999999999998777  78999998754    


Q ss_pred             -----CcEEEEEcccCeeEeeeCCCCCCCCCCCCCC---------CCCcc------ccccc---eeEeeCCCCcEEEEEE
Q psy11015        244 -----KSVHIWQAVINWECLVSNNDNDSDLDESKEP---------DESSI------TLRTP---VKELLGHSNVVIAADW  300 (360)
Q Consensus       244 -----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~------~~~~~---~~~~~~h~~~v~~i~~  300 (360)
                           .-|+|||++.-.....+..+..+.+....+.         ..+..      ....|   +..+....+.+.++++
T Consensus       241 ~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDi  320 (1118)
T KOG1275|consen  241 NLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDI  320 (1118)
T ss_pred             cccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEe
Confidence                 4578999998766655544433332221111         00000      01111   2223334456899999


Q ss_pred             cCCCCEEEEEECCCcEEEEE
Q psy11015        301 LSDGEQVITASWDRVANLFD  320 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd  320 (360)
                      +++|+.++.|..+|.|.+|-
T Consensus       321 Ssn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  321 SSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             cCCCceEEEecccCcEeeec
Confidence            99999999999999999996

>KOG2066|consensus

Probab=98.25  E-value=5.2e-06  Score=79.66  Aligned_cols=137  Identities=20%  Similarity=0.142  Sum_probs=100.2

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      .+.+.|++++  +.+|+-|.-+|.|++++.. |.. .+...|+..      .-+|.+++|||.||+|.|.-+-++..+  
T Consensus        39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~--  106 (846)
T KOG2066|consen   39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEI--  106 (846)
T ss_pred             hhHHHHHHhh--cceeeeccccceEEEEecC-Ccc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccc--
Confidence            4567788887  5689999999999999976 333 333335543      558999999999999999877655322  


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-----CCEEEEEECCCcEEEEECCC-CeEEE-EEec
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-----GEQVITASWDRVANLFDVET-GTILQ-SLTE  332 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-----g~~l~tgs~dg~i~iwd~~~-~~~~~-~l~~  332 (360)
                                                .++ ....++.+++++|+     .+++++||.-| +.++.-+- |.... .+..
T Consensus       107 --------------------------~~~-df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~  158 (846)
T KOG2066|consen  107 --------------------------TQY-DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSE  158 (846)
T ss_pred             --------------------------eeE-ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeec
Confidence                                      112 23467889999997     57899999988 87876432 11111 3555


Q ss_pred             CCCceEEEEEcCCCCEEEcccccchh
Q psy11015        333 PGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      ..++|.++.|.  |+++|-+.|.+||
T Consensus       159 ~eG~I~~i~W~--g~lIAWand~Gv~  182 (846)
T KOG2066|consen  159 GEGPIHSIKWR--GNLIAWANDDGVK  182 (846)
T ss_pred             CccceEEEEec--CcEEEEecCCCcE
Confidence            67899999996  9999999998876

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.23  E-value=0.0011  Score=60.19  Aligned_cols=183  Identities=10%  Similarity=-0.005  Sum_probs=112.9

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeC----------CCcEEEEECCCCeEEEEEeCC-------CcCeEEEE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA----------DRTVRLWSTQTGKCVLQYSGH-------SGSVNSVR  229 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~----------Dg~v~iwd~~~~~~~~~~~~h-------~~~v~~i~  229 (360)
                      ..+.+.+.++..-..+-- + ++|+++.|+.+..          +..|.+||..+.+.+..+.--       ......++
T Consensus        34 ~~~~~v~g~i~~G~~P~~-~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~  111 (352)
T TIGR02658        34 GEAGRVLGMTDGGFLPNP-V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTS  111 (352)
T ss_pred             CCCCEEEEEEEccCCCce-e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEE
Confidence            334555566654333332 4 9999997777765          789999999999999888631       22344889


Q ss_pred             EeeCCCEEEEEe-C-CCcEEEEEcccCeeEeeeCCCCC---------------CCCCC----------------CC--C-
Q psy11015        230 FLPNKDLVLSAS-G-DKSVHIWQAVINWECLVSNNDND---------------SDLDE----------------SK--E-  273 (360)
Q Consensus       230 ~~p~~~~l~s~s-~-d~~i~vwd~~~~~~~~~~~~~~~---------------~~~~~----------------~~--~-  273 (360)
                      ++|+|++++... . +..|-+.|+.++.....+....+               .+...                ..  . 
T Consensus       112 ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~  191 (352)
T TIGR02658       112 LTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPE  191 (352)
T ss_pred             ECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCC
Confidence            999999888765 3 68899999887654443222210               00000                00  0 


Q ss_pred             -----------CCCCccc-------------------cccceeEee-------CCCCcEEEEEEcCCCCEEEEEEC----
Q psy11015        274 -----------PDESSIT-------------------LRTPVKELL-------GHSNVVIAADWLSDGEQVITASW----  312 (360)
Q Consensus       274 -----------~~~~~~~-------------------~~~~~~~~~-------~h~~~v~~i~~sp~g~~l~tgs~----  312 (360)
                                 ..+....                   ...+...+.       -..+.+.-++++|+|++++....    
T Consensus       192 ~~~v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~  271 (352)
T TIGR02658       192 DEYLINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAK  271 (352)
T ss_pred             ccccccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCcc
Confidence                       0000000                   000111110       01222334889999998877432    


Q ss_pred             ------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEcc
Q psy11015        313 ------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASP  352 (360)
Q Consensus       313 ------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~  352 (360)
                            .+.|.++|..+++.+..+.. ...+..++++|+|. ++.+.
T Consensus       272 ~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvt  317 (352)
T TIGR02658       272 WTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYAL  317 (352)
T ss_pred             ccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEe
Confidence                  24799999999999998874 45789999999999 55533

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG2695|consensus

Probab=98.22  E-value=2.1e-06  Score=74.67  Aligned_cols=135  Identities=13%  Similarity=0.116  Sum_probs=97.3

Q ss_pred             EEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCC
Q psy11015        196 GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPD  275 (360)
Q Consensus       196 ~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  275 (360)
                      ++.+.+-.|-+-|+++|.. +.|. ..+.|.++.|+..++++..|...|.|.+.|++....-                  
T Consensus       228 fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG------------------  287 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQG------------------  287 (425)
T ss_pred             ecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccC------------------
Confidence            6677788888999988753 3343 5678999999988999999999999999999865110                  


Q ss_pred             CCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCeE---EEEEecCCCceEEEEE--cC-CCCE
Q psy11015        276 ESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTI---LQSLTEPGEAIRAAAG--RT-GGPI  348 (360)
Q Consensus       276 ~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~---~~~l~~h~~~v~~~~~--~~-~g~~  348 (360)
                           ..-+...+ -|.+.|+++.... ++.+|.+.+.+|+|.+||.+.-++   +.+..+|-....-+-+  ++ +|.+
T Consensus       288 -----~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I  361 (425)
T KOG2695|consen  288 -----NGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSI  361 (425)
T ss_pred             -----CCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceE
Confidence                 01123333 4888999988776 788899999999999999997777   8888888554333333  33 3445


Q ss_pred             EEcccccc
Q psy11015        349 RASPLLLA  356 (360)
Q Consensus       349 las~~~~~  356 (360)
                      ++.+-|-.
T Consensus       362 ~s~GdDcy  369 (425)
T KOG2695|consen  362 FSVGDDCY  369 (425)
T ss_pred             EEccCeeE
Confidence            55444433

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.21  E-value=2e-05  Score=67.79  Aligned_cols=179  Identities=16%  Similarity=0.229  Sum_probs=111.6

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-----EEEEEeCCC------------cCeEEEEEeeCC--CEEEE
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----CVLQYSGHS------------GSVNSVRFLPNK--DLVLS  239 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-----~~~~~~~h~------------~~v~~i~~~p~~--~~l~s  239 (360)
                      ..+.|+++.|...|.+|++|...|.|.+|.-....     ....|++|.            ..|..|.|..++  ..++.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            34678999999999999999999999999865432     233466665            357889997654  35777


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCC--------------CCCCccccccceeEe-eCCCCcEEEEEEcCCC
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKE--------------PDESSITLRTPVKEL-LGHSNVVIAADWLSDG  304 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g  304 (360)
                      .+.|++|++|.+............-......+-.              ..-..+....|.... ..|...+.+++|+.|.
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~  184 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK  184 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence            7899999999987543222211110000000000              000011111233323 5788899999999888


Q ss_pred             CEEEEEECCCcEEEEECCCCe---EEEEEecCC-----CceEEEEEcCCC--CEEEcccccchh
Q psy11015        305 EQVITASWDRVANLFDVETGT---ILQSLTEPG-----EAIRAAAGRTGG--PIRASPLLLAIR  358 (360)
Q Consensus       305 ~~l~tgs~dg~i~iwd~~~~~---~~~~l~~h~-----~~v~~~~~~~~g--~~las~~~~~ir  358 (360)
                      ..++++ .|=.|.+|++.--.   -+--++.|.     .-|++..|||..  .+..+++.+.|+
T Consensus       185 et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ik  247 (460)
T COG5170         185 ETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIK  247 (460)
T ss_pred             heeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence            877765 46889999876322   223344453     367888999853  355566666653

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.21  E-value=0.00024  Score=62.61  Aligned_cols=169  Identities=16%  Similarity=0.162  Sum_probs=108.2

Q ss_pred             CeEEEeeecCccceee-eeeeecCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECCC--CeEE--EEEeCCCcCeEEE
Q psy11015        157 SKIVSSFKTSLLSCYK-IRSFSGHRDGVWDVAVRPGQPVLGSASAD---RTVRLWSTQT--GKCV--LQYSGHSGSVNSV  228 (360)
Q Consensus       157 ~~~~~~~~~~~~~~~~-~~~l~~h~~~V~~l~~~~~~~~l~sgs~D---g~v~iwd~~~--~~~~--~~~~~h~~~v~~i  228 (360)
                      +.-+.+|..+..++.+ ...+-.+.+..+-|+|+|+++.|.++-.+   |.|-.|.++.  |+..  .....-..+.+.+
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv   94 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV   94 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence            3334445554433332 22334566778889999999999888655   6777776654  5432  2222122334889


Q ss_pred             EEeeCCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCc----------EEE
Q psy11015        229 RFLPNKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV----------VIA  297 (360)
Q Consensus       229 ~~~p~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~----------v~~  297 (360)
                      +++++|++++++.. .|.|.++.++......                        .++.. ..|.+.          +.+
T Consensus        95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~------------------------~~v~~-~~h~g~~p~~rQ~~~h~H~  149 (346)
T COG2706          95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQ------------------------PVVQV-VKHTGSGPHERQESPHVHS  149 (346)
T ss_pred             EECCCCCEEEEEEccCceEEEEEcccCCccc------------------------cceee-eecCCCCCCccccCCccce
Confidence            99999999988875 5789999886532111                        11111 122222          778


Q ss_pred             EEEcCCCCEEEEEEC-CCcEEEEECCCCeEEEE---EecCCCceEEEEEcCCCCEEE
Q psy11015        298 ADWLSDGEQVITASW-DRVANLFDVETGTILQS---LTEPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       298 i~~sp~g~~l~tgs~-dg~i~iwd~~~~~~~~~---l~~h~~~v~~~~~~~~g~~la  350 (360)
                      ..+.|++++|++.+. --.|.+|++..|.....   .-.....-+.++|||+|++..
T Consensus       150 a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY  206 (346)
T COG2706         150 ANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAY  206 (346)
T ss_pred             eeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEE
Confidence            899999999988764 24588999987764321   113456779999999998654

>KOG2314|consensus

Probab=98.14  E-value=3e-05  Score=71.60  Aligned_cols=138  Identities=14%  Similarity=0.169  Sum_probs=97.2

Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC-----------CcEEEEEcc
Q psy11015        184 WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD-----------KSVHIWQAV  252 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d-----------~~i~vwd~~  252 (360)
                      +-+.|||.|.+|+|-..-| |.+|--.+...++.|. |. .|.-+.|||..++|+|=|.-           ..++|||++
T Consensus       214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~  290 (698)
T KOG2314|consen  214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA  290 (698)
T ss_pred             eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence            4578999999999988765 6689877766666665 54 58899999999999986431           468999999


Q ss_pred             cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                      +|.....                         ...+.+....-.-..||.|++|+|.-.. ..|.||+..+..++..-.-
T Consensus       291 tG~lkrs-------------------------F~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Ksl  344 (698)
T KOG2314|consen  291 TGLLKRS-------------------------FPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSL  344 (698)
T ss_pred             ccchhcc-------------------------eeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeeccccc
Confidence            9843321                         1111111111224789999999987665 5688999876554432222


Q ss_pred             CCCceEEEEEcCCCCEEE
Q psy11015        333 PGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~la  350 (360)
                      .-..|....|+|.+++||
T Consensus       345 ki~gIr~FswsP~~~llA  362 (698)
T KOG2314|consen  345 KISGIRDFSWSPTSNLLA  362 (698)
T ss_pred             CCccccCcccCCCcceEE
Confidence            345788999999999988

>KOG0309|consensus

Probab=98.13  E-value=1.2e-05  Score=76.61  Aligned_cols=148  Identities=21%  Similarity=0.295  Sum_probs=106.1

Q ss_pred             EEEEEECCCC--C-EEEEEeCCCcEEEEECCCC---eEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEEcccCe
Q psy11015        183 VWDVAVRPGQ--P-VLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       183 V~~l~~~~~~--~-~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      |-.+.|+|..  + .+++.+.. ...+|++...   ..-..+.||+..|+.+.|+|.. ..+++++.|..++.||+++. 
T Consensus        70 vad~qws~h~a~~~wiVsts~q-kaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp-  147 (1081)
T KOG0309|consen   70 VADVQWSPHPAKPYWIVSTSNQ-KAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSP-  147 (1081)
T ss_pred             hcceecccCCCCceeEEecCcc-hhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCC-
Confidence            3344565532  2 45555444 4457988633   3445678999999999999864 58899999999999999865 


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEEEecCC
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLTEPG  334 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~l~~h~  334 (360)
                                                ..++.....-......++|+.....+...+..+.+++||.+.| .++..+++|.
T Consensus       148 --------------------------~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~v  201 (1081)
T KOG0309|consen  148 --------------------------HRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHV  201 (1081)
T ss_pred             --------------------------CcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccc
Confidence                                      2345555544456677899987667777777788999999866 5678889998


Q ss_pred             CceEEEEEcC--CCCEEEcccccchh
Q psy11015        335 EAIRAAAGRT--GGPIRASPLLLAIR  358 (360)
Q Consensus       335 ~~v~~~~~~~--~g~~las~~~~~ir  358 (360)
                      ..|+.++|..  .+.++.++.|++++
T Consensus       202 s~vn~~~fnr~~~s~~~s~~~d~tvk  227 (1081)
T KOG0309|consen  202 SSVNSIDFNRFKYSEIMSSSNDGTVK  227 (1081)
T ss_pred             eeeehHHHhhhhhhhhcccCCCCcee
Confidence            8899888864  35566666666654

>KOG0882|consensus

Probab=98.10  E-value=8.8e-06  Score=73.20  Aligned_cols=178  Identities=18%  Similarity=0.195  Sum_probs=115.2

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEEE----------------------------
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQY----------------------------  218 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~~~~~~~~----------------------------  218 (360)
                      .....+..+..|.+.|.+++.+.++-++.|++. |..++++|+.+-..+.-+                            
T Consensus        41 sGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~  120 (558)
T KOG0882|consen   41 SGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFK  120 (558)
T ss_pred             cceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeeccc
Confidence            344677888999999999999999999999777 999999988643221100                            


Q ss_pred             --------------------eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCc
Q psy11015        219 --------------------SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESS  278 (360)
Q Consensus       219 --------------------~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (360)
                                          .-|..+|.++.++|-+..+++....|.|.-|.......             .+.....+.
T Consensus       121 sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~q-------------fPr~~l~~~  187 (558)
T KOG0882|consen  121 SGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQ-------------FPRTNLNFE  187 (558)
T ss_pred             CCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCccc-------------Ccccccccc
Confidence                                11556666666666666666666666666665432100             000000001


Q ss_pred             cccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec--------------------------
Q psy11015        279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE--------------------------  332 (360)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~--------------------------  332 (360)
                      +...+-+..+.-......++.|+|+|..+.+-+.|..|+++++.+|+.++.+..                          
T Consensus       188 ~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmav  267 (558)
T KOG0882|consen  188 LKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAV  267 (558)
T ss_pred             ccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhH
Confidence            111112222333445678999999999999999999999999999987665431                          


Q ss_pred             ------CC-CceEEEEEcCCCCEEEcccccchh
Q psy11015        333 ------PG-EAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       333 ------h~-~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                            |. ..-+.+.|...|+++..++..+|+
T Consensus       268 erelek~~~~~~~~~~fdes~~flly~t~~gik  300 (558)
T KOG0882|consen  268 ERELEKHGSTVGTNAVFDESGNFLLYGTILGIK  300 (558)
T ss_pred             HhhHhhhcCcccceeEEcCCCCEEEeecceeEE
Confidence                  11 122456788888888877766654

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.07  E-value=0.0002  Score=73.41  Aligned_cols=144  Identities=14%  Similarity=0.179  Sum_probs=95.2

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECC---------------C--------CeEEEEEeC----------------
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---------------T--------GKCVLQYSG----------------  220 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~---------------~--------~~~~~~~~~----------------  220 (360)
                      ..+|.|++||||+..|+....++++.+-+-.               .        |+.-.+|+|                
T Consensus       120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~  199 (928)
T PF04762_consen  120 DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVP  199 (928)
T ss_pred             cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCC
Confidence            4689999999999999999999988775321               0        111111211                


Q ss_pred             --------CCcCeEEEEEeeCCCEEEEEeC---C---CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccccee
Q psy11015        221 --------HSGSVNSVRFLPNKDLVLSASG---D---KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVK  286 (360)
Q Consensus       221 --------h~~~v~~i~~~p~~~~l~s~s~---d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (360)
                              +...-..|+|-.||.+||+.+.   .   +.++||+-. |...                            .
T Consensus       200 ~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~----------------------------s  250 (928)
T PF04762_consen  200 KVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQ----------------------------S  250 (928)
T ss_pred             ccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEE----------------------------e
Confidence                    1223457889999999998765   2   578999854 3111                            1


Q ss_pred             EeeCCCCcEEEEEEcCCCCEEEEEEC---CCcEEEEECCCCeEEEEEe----cCCCceEEEEEcCCCCEEEccc
Q psy11015        287 ELLGHSNVVIAADWLSDGEQVITASW---DRVANLFDVETGTILQSLT----EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       287 ~~~~h~~~v~~i~~sp~g~~l~tgs~---dg~i~iwd~~~~~~~~~l~----~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +...-.+--.+++|.|.|++||+...   ...|.+|. ++|-....|.    .....|..++|++++.+||--.
T Consensus       251 tSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~  323 (928)
T PF04762_consen  251 TSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWL  323 (928)
T ss_pred             ccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEe
Confidence            11111222346899999999998754   34577777 4565544443    3456899999999999998644

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.04  E-value=6.6e-05  Score=68.71  Aligned_cols=136  Identities=17%  Similarity=0.233  Sum_probs=96.0

Q ss_pred             cCCCCEEEEEECCCCCEEEE--EeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC---CcEEEEEcc
Q psy11015        178 GHRDGVWDVAVRPGQPVLGS--ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAV  252 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~s--gs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d---~~i~vwd~~  252 (360)
                      +-.++|..++|.|.++.+++  |-.+-++-++|++.. ....+  -...=+.+-|+|.+++++.++.|   |.+-+||..
T Consensus       272 ~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~--Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~  348 (561)
T COG5354         272 DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF--PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPA  348 (561)
T ss_pred             cccccceeeeecccCCceeEEecccccceeecccccc-eEEec--CCcccccccccCcccEEEEecCCccccceEEeccC
Confidence            45789999999998885554  457888999999855 33333  34455788899999999998876   568899876


Q ss_pred             cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE------CCCcEEEEECCCCeE
Q psy11015        253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS------WDRVANLFDVETGTI  326 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs------~dg~i~iwd~~~~~~  326 (360)
                      ..-.                           .+..+.+-  ..+-+.|+|+|.++.+..      .|..+.|||+.... 
T Consensus       349 ~rf~---------------------------~~~~~~~~--n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~-  398 (561)
T COG5354         349 GRFK---------------------------VAGAFNGL--NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK-  398 (561)
T ss_pred             CceE---------------------------EEEEeecC--CceEeeccCCceEEEecCCCcccccCcceEEEEecCch-
Confidence            4422                           12233332  345578999999987764      37789999976332 


Q ss_pred             EEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        327 LQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       327 ~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +.       ..+.+.|.|.|++..|++
T Consensus       399 ~f-------el~~~~W~p~~~~~ttsS  418 (561)
T COG5354         399 VF-------ELTNITWDPSGQYVTTSS  418 (561)
T ss_pred             hh-------hhhhccccCCcccceeec
Confidence            21       567788888888776654

>smart00320 WD40 WD40 repeats

Probab=98.03  E-value=1.7e-05  Score=46.12  Aligned_cols=39  Identities=36%  Similarity=0.565  Sum_probs=35.1

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS  208 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd  208 (360)
                      +.++..+.+|...|+++.|++.+..+++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            356677889999999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG1645|consensus

Probab=98.01  E-value=6.4e-05  Score=66.90  Aligned_cols=85  Identities=15%  Similarity=0.195  Sum_probs=73.6

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSV  246 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i  246 (360)
                      +.....-+.+|...|.+++|+|..+ ++..++.+.+|+|.|+++..++..+..| ..+++++|.-+. .+++.|...|.|
T Consensus       182 ~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~V  260 (463)
T KOG1645|consen  182 DFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMV  260 (463)
T ss_pred             CcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceE
Confidence            3344556778889999999999877 8999999999999999999999999977 789999998765 578888899999


Q ss_pred             EEEEcccC
Q psy11015        247 HIWQAVIN  254 (360)
Q Consensus       247 ~vwd~~~~  254 (360)
                      .|||++..
T Consensus       261 lvyD~R~~  268 (463)
T KOG1645|consen  261 LVYDMRQP  268 (463)
T ss_pred             EEEEccCC
Confidence            99999865

>KOG1920|consensus

Probab=97.97  E-value=0.00024  Score=71.54  Aligned_cols=167  Identities=14%  Similarity=0.163  Sum_probs=100.9

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      .+.|.++.|..+.+.++.+..+|.|.+-|..+..... ...-...|.+++|+||+..++..++++++.+-+..- .....
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~ei-vg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f-~~i~E  145 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELEI-VGNVDNGISAASWSPDEELLALITGRQTLLFMTKDF-EPIAE  145 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEcccccceee-eeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccc-cchhc
Confidence            3689999999999999999999999999888764322 222456899999999999999999988886643210 00000


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEee------------------C---CCCcEEEEEEcCCCCEEEEE-----ECC
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELL------------------G---HSNVVIAADWLSDGEQVITA-----SWD  313 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~---h~~~v~~i~~sp~g~~l~tg-----s~d  313 (360)
                      ...+.. .........   ..+++.-..+.                  +   ..+.=++++|.-||.++++.     ...
T Consensus       146 ~~L~~d-~~~~sk~v~---VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~  221 (1265)
T KOG1920|consen  146 KPLDAD-DERKSKFVN---VGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGT  221 (1265)
T ss_pred             cccccc-cccccccce---ecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCc
Confidence            000000 000000000   00111111111                  1   11223468999999999883     223


Q ss_pred             CcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        314 RVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       314 g~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +.++|||.. |..-.+-....+.=.+++|-|.|.++|+--
T Consensus       222 RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq  260 (1265)
T KOG1920|consen  222 RKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQ  260 (1265)
T ss_pred             eeEEEeccc-chhhcccCcccccccceeecCCCCeEeeee
Confidence            789999976 543222222333446789999999988643

>KOG3621|consensus

Probab=97.92  E-value=0.00011  Score=69.92  Aligned_cols=138  Identities=17%  Similarity=0.157  Sum_probs=96.5

Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      |.=-+++..+.+++.|+.-|.+.+|+-..+.... ...+..+.+..+..+++..++|.|+..|.|.++.+........  
T Consensus        36 v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~--  113 (726)
T KOG3621|consen   36 VKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL--  113 (726)
T ss_pred             EEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc--
Confidence            3333456667899999999999999987765332 2333556677888898888999999999999998775311100  


Q ss_pred             CCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC----eEEEEEecCCCc
Q psy11015        262 NDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG----TILQSLTEPGEA  336 (360)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~----~~~~~l~~h~~~  336 (360)
                                           ..+... ..|...|++++|++++..+++|...|+|..-.+.+.    -..+.+-.-..+
T Consensus       114 ---------------------~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~  172 (726)
T KOG3621|consen  114 ---------------------DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSE  172 (726)
T ss_pred             ---------------------eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcc
Confidence                                 001111 127889999999999999999999999988887762    112333334566


Q ss_pred             eEEEEEc
Q psy11015        337 IRAAAGR  343 (360)
Q Consensus       337 v~~~~~~  343 (360)
                      |..+...
T Consensus       173 IVQlD~~  179 (726)
T KOG3621|consen  173 IVQLDYL  179 (726)
T ss_pred             eEEeecc
Confidence            7666655

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.87  E-value=0.002  Score=56.76  Aligned_cols=141  Identities=18%  Similarity=0.262  Sum_probs=100.2

Q ss_pred             EEEEECC-CCCEEEEEeCCCc-EEEEECCCCeEEEEEeCCCcC--eEEEEEeeCCCEEEEEeC-----CCcEEEEEcccC
Q psy11015        184 WDVAVRP-GQPVLGSASADRT-VRLWSTQTGKCVLQYSGHSGS--VNSVRFLPNKDLVLSASG-----DKSVHIWQAVIN  254 (360)
Q Consensus       184 ~~l~~~~-~~~~l~sgs~Dg~-v~iwd~~~~~~~~~~~~h~~~--v~~i~~~p~~~~l~s~s~-----d~~i~vwd~~~~  254 (360)
                      ..++.+| ....++.+-.-|+ ..+||..++.....+..-.+.  --.-.|+|||++|++.-.     .|.|-|||...+
T Consensus         8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~   87 (305)
T PF07433_consen    8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG   87 (305)
T ss_pred             cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC
Confidence            4677888 4456777777665 678999999877766532221  224679999999998643     478999998844


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE------------------CCCcE
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS------------------WDRVA  316 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs------------------~dg~i  316 (360)
                      .                           ..+..+..|.-....+.+.|||+.|+.+.                  .+-.+
T Consensus        88 ~---------------------------~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL  140 (305)
T PF07433_consen   88 Y---------------------------RRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSL  140 (305)
T ss_pred             c---------------------------EEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCce
Confidence            2                           23556666666666788999998887653                  12346


Q ss_pred             EEEECCCCeEEEE--E--ecCCCceEEEEEcCCCCEEEc
Q psy11015        317 NLFDVETGTILQS--L--TEPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       317 ~iwd~~~~~~~~~--l--~~h~~~v~~~~~~~~g~~las  351 (360)
                      .+.|..+|+.+..  +  .-|..+|..+++.++|..++.
T Consensus       141 ~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a  179 (305)
T PF07433_consen  141 VYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFA  179 (305)
T ss_pred             EEEecCCCceeeeeecCccccccceeeEEecCCCcEEEE
Confidence            6678888988876  4  337789999999999987764

>KOG1912|consensus

Probab=97.86  E-value=0.00029  Score=67.77  Aligned_cols=193  Identities=15%  Similarity=0.100  Sum_probs=127.8

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCC------------CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPG------------QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~------------~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~  230 (360)
                      +..+..+.+.+..+.-|...|+.+.|.|-            ...|+++...|.|.+||...+..+..+..|..++..++|
T Consensus        38 ~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W  117 (1062)
T KOG1912|consen   38 SVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCW  117 (1062)
T ss_pred             EEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheee
Confidence            44456677889999999999999999762            125777788899999999999888889989999999999


Q ss_pred             eeC---C-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCC----------------------ccccccc
Q psy11015        231 LPN---K-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDES----------------------SITLRTP  284 (360)
Q Consensus       231 ~p~---~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~  284 (360)
                      -|.   . ..+++-....++.+|+..+|.....+......-......+.+.                      ....++.
T Consensus       118 ~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~  197 (1062)
T KOG1912|consen  118 VPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKE  197 (1062)
T ss_pred             eeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCcee
Confidence            872   3 4677778888999999999987776555422211110000000                      0000111


Q ss_pred             eeEeeCCCC----------------c---------EEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEE
Q psy11015        285 VKELLGHSN----------------V---------VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA  339 (360)
Q Consensus       285 ~~~~~~h~~----------------~---------v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~  339 (360)
                      .+.-..|+.                .         ...++|+|.-+.++-....+.+.++|++-..++.......+.+.-
T Consensus       198 ~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akf  277 (1062)
T KOG1912|consen  198 FQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKF  277 (1062)
T ss_pred             EEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcce
Confidence            111112221                0         113456887766666677788999999988888877766666666


Q ss_pred             EEEcCCCC---EEEccccc
Q psy11015        340 AAGRTGGP---IRASPLLL  355 (360)
Q Consensus       340 ~~~~~~g~---~las~~~~  355 (360)
                      +.|-|+++   +++-..++
T Consensus       278 v~vlP~~~rd~LfclH~nG  296 (1062)
T KOG1912|consen  278 VDVLPDPRRDALFCLHSNG  296 (1062)
T ss_pred             eEeccCCCcceEEEEecCC
Confidence            67766653   44444443

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=97.84  E-value=0.0005  Score=63.92  Aligned_cols=133  Identities=14%  Similarity=0.122  Sum_probs=87.6

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES  271 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  271 (360)
                      +..++.++.+|.+..||..+|+.+..... . ......  ..+..++.++.||.+..+|..++.......          
T Consensus       241 ~~~vy~~~~~g~l~a~d~~tG~~~W~~~~-~-~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~----------  306 (377)
T TIGR03300       241 GGQVYAVSYQGRVAALDLRSGRVLWKRDA-S-SYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKND----------  306 (377)
T ss_pred             CCEEEEEEcCCEEEEEECCCCcEEEeecc-C-CccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccc----------
Confidence            45788888999999999999987766542 1 112222  246678888899999999998885443210          


Q ss_pred             CCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEc
Q psy11015        272 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las  351 (360)
                                     .+.+  ....+...  .+..+++++.+|.++++|..+|+.+..+..+...+..--.-.++.+++.
T Consensus       307 ---------------~~~~--~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~  367 (377)
T TIGR03300       307 ---------------ELKY--RQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQ  367 (377)
T ss_pred             ---------------cccC--CccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEE
Confidence                           0111  11111122  3678999999999999999999999888866654433322334556666


Q ss_pred             ccccch
Q psy11015        352 PLLLAI  357 (360)
Q Consensus       352 ~~~~~i  357 (360)
                      +.++.|
T Consensus       368 ~~dG~l  373 (377)
T TIGR03300       368 TRDGDL  373 (377)
T ss_pred             eCCceE
Confidence            666543

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>smart00320 WD40 WD40 repeats

Probab=97.82  E-value=6.2e-05  Score=43.61  Aligned_cols=39  Identities=36%  Similarity=0.721  Sum_probs=34.9

Q ss_pred             CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        212 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       212 ~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      +.++..+..|...|.++.|+|.+.++++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            456777888999999999999999999999999999995

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=97.78  E-value=0.0011  Score=61.02  Aligned_cols=137  Identities=9%  Similarity=-0.011  Sum_probs=92.9

Q ss_pred             EEEECCCCCEEEEEe-----------CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe--CCCcEEEEEc
Q psy11015        185 DVAVRPGQPVLGSAS-----------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS--GDKSVHIWQA  251 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs-----------~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s--~d~~i~vwd~  251 (360)
                      .+.|++.|++|+.--           ....+.++++.... +....+..++|..++|.|.++.|++.+  ++..+.++|+
T Consensus       227 qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~l  305 (561)
T COG5354         227 QLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDL  305 (561)
T ss_pred             EEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc-cceeccccccceeeeecccCCceeEEecccccceeeccc
Confidence            456778777544321           11356677766332 333335678999999999988776554  6788999998


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcEEEEECCCCeE-E
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTI-L  327 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i~iwd~~~~~~-~  327 (360)
                      +.+                             ..  +..-...-+.+-|+|.+++++.++.|   |.+-+||....-. +
T Consensus       306 r~N-----------------------------l~--~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~  354 (561)
T COG5354         306 RGN-----------------------------LR--FYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVA  354 (561)
T ss_pred             ccc-----------------------------eE--EecCCcccccccccCcccEEEEecCCccccceEEeccCCceEEE
Confidence            865                             11  12233344567899999999998876   7799999875543 3


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      ..+.+.+  .+-+.|+|+|.++-++.++
T Consensus       355 ~~~~~~n--~s~~~wspd~qF~~~~~ts  380 (561)
T COG5354         355 GAFNGLN--TSYCDWSPDGQFYDTDTTS  380 (561)
T ss_pred             EEeecCC--ceEeeccCCceEEEecCCC
Confidence            3666554  3557899999998877654

>KOG4640|consensus

Probab=97.77  E-value=0.00015  Score=68.27  Aligned_cols=76  Identities=8%  Similarity=0.114  Sum_probs=67.5

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeE-EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN-SVRFLPNKDLVLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~-~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      .|.-+.|+|.-.++|++..+|.|.+..+. .+.+.++.-|...++ +++|.|||++++.|-.||+|++-|+.++....
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~   98 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV   98 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence            56778899999999999999999999888 777888887777777 99999999999999999999999999885544

>KOG1645|consensus

Probab=97.76  E-value=7e-05  Score=66.67  Aligned_cols=92  Identities=15%  Similarity=0.195  Sum_probs=74.6

Q ss_pred             EEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccc
Q psy11015        204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLR  282 (360)
Q Consensus       204 v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (360)
                      |++.+..+-+....+.+|...|.+++|+|... ++..++.+.+|+|.|+.+.                            
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~----------------------------  226 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETS----------------------------  226 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccc----------------------------
Confidence            66666666666667788889999999999877 7888999999999999876                            


Q ss_pred             cceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCC
Q psy11015        283 TPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETG  324 (360)
Q Consensus       283 ~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~  324 (360)
                      ..+.....| ..+++++|..+. ++|+.|-..|.|.|||++..
T Consensus       227 ~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~  268 (463)
T KOG1645|consen  227 CVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP  268 (463)
T ss_pred             eeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence            234555556 789999998765 56788889999999999854

>KOG4190|consensus

Probab=97.76  E-value=5.6e-05  Score=69.85  Aligned_cols=142  Identities=18%  Similarity=0.191  Sum_probs=79.5

Q ss_pred             EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC-------eeEeeeCCCCCCCCCCCC-------CCCCC--
Q psy11015        214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-------WECLVSNNDNDSDLDESK-------EPDES--  277 (360)
Q Consensus       214 ~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~-------~~~~~~~~~~~~~~~~~~-------~~~~~--  277 (360)
                      .+..|.||+..|+.++--.+.+-+++++.|++|++|.++..       .+...+..+..+......       ...+.  
T Consensus       727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~gi  806 (1034)
T KOG4190|consen  727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGI  806 (1034)
T ss_pred             eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcc
Confidence            45678899999999888777888999999999999998643       122233333222211110       01111  


Q ss_pred             ---ccccccceeEee--CCCCcEEEEEEcCC--CCEEEEE-ECCCcEEEEECCCCeEEEEEe-----cCCCceEEEEEcC
Q psy11015        278 ---SITLRTPVKELL--GHSNVVIAADWLSD--GEQVITA-SWDRVANLFDVETGTILQSLT-----EPGEAIRAAAGRT  344 (360)
Q Consensus       278 ---~~~~~~~~~~~~--~h~~~v~~i~~sp~--g~~l~tg-s~dg~i~iwd~~~~~~~~~l~-----~h~~~v~~~~~~~  344 (360)
                         ..-.++++....  ...+.+..+...|+  ...++.| +...+|+++|.+.+.....++     ++..-+.+++..|
T Consensus       807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~  886 (1034)
T KOG4190|consen  807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVAD  886 (1034)
T ss_pred             eeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEecc
Confidence               111122222111  11122222333232  2333333 556777777777776665554     3345678888888


Q ss_pred             CCCEEEccccc
Q psy11015        345 GGPIRASPLLL  355 (360)
Q Consensus       345 ~g~~las~~~~  355 (360)
                      .|+++|.+..+
T Consensus       887 ~GN~lAa~LSn  897 (1034)
T KOG4190|consen  887 KGNKLAAALSN  897 (1034)
T ss_pred             CcchhhHHhcC
Confidence            99888876543

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.74  E-value=0.00065  Score=67.50  Aligned_cols=138  Identities=15%  Similarity=0.121  Sum_probs=91.9

Q ss_pred             CCEEEE-EeCCCcEEEEECCCCeEEEEEeCCCcC-eEEEEEee-----CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCC
Q psy11015        192 QPVLGS-ASADRTVRLWSTQTGKCVLQYSGHSGS-VNSVRFLP-----NKDLVLSASGDKSVHIWQAVINWECLVSNNDN  264 (360)
Q Consensus       192 ~~~l~s-gs~Dg~v~iwd~~~~~~~~~~~~h~~~-v~~i~~~p-----~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~  264 (360)
                      ...|+. ......|+-.|++.|+.+..|..|... |.+++-..     +....+.|-.+..+..||.+-......     
T Consensus       493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v-----  567 (794)
T PF08553_consen  493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLV-----  567 (794)
T ss_pred             cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCcee-----
Confidence            334333 345678999999999999999977644 55544321     133456778888899999885311000     


Q ss_pred             CCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE-EEEecCCCceEEEEEc
Q psy11015        265 DSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL-QSLTEPGEAIRAAAGR  343 (360)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~-~~l~~h~~~v~~~~~~  343 (360)
                                       ....... ......+|++-..+| +||+|+.+|.||+||- .|... ..|.+.+.+|.++..+
T Consensus       568 -----------------~~~~k~Y-~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt  627 (794)
T PF08553_consen  568 -----------------DSQSKQY-SSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVT  627 (794)
T ss_pred             -----------------ecccccc-ccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEec
Confidence                             0011111 223456777776555 8999999999999994 44333 3456678999999999


Q ss_pred             CCCCEEEcccc
Q psy11015        344 TGGPIRASPLL  354 (360)
Q Consensus       344 ~~g~~las~~~  354 (360)
                      .||+|+.+..+
T Consensus       628 ~DGkwilaTc~  638 (794)
T PF08553_consen  628 ADGKWILATCK  638 (794)
T ss_pred             CCCcEEEEeec
Confidence            99998876544

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=97.74  E-value=0.019  Score=49.90  Aligned_cols=139  Identities=17%  Similarity=0.149  Sum_probs=84.2

Q ss_pred             EEEEEEC-CCCCEEEEEeCCCcEEEEECCCCeEEEEEeC-----CCcCeEEEEEeeCCCEEEEEeCC--------CcEEE
Q psy11015        183 VWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSG-----HSGSVNSVRFLPNKDLVLSASGD--------KSVHI  248 (360)
Q Consensus       183 V~~l~~~-~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-----h~~~v~~i~~~p~~~~l~s~s~d--------~~i~v  248 (360)
                      ...+++. +++ .++.+..++ +.++|..+++....+..     .....+.+++.|+|++.++....        +.+..
T Consensus        42 ~~G~~~~~~~g-~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~  119 (246)
T PF08450_consen   42 PNGMAFDRPDG-RLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYR  119 (246)
T ss_dssp             EEEEEEECTTS-EEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEE
T ss_pred             CceEEEEccCC-EEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEE
Confidence            6677777 565 555555554 45559998854433332     33568899999999988876654        33555


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE-EEECCCcEEEEECC--CCe
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASWDRVANLFDVE--TGT  325 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~-tgs~dg~i~iwd~~--~~~  325 (360)
                      ++.. +.                             +..+...-...+.++|+|+++.|+ +-+..+.|..|++.  .+.
T Consensus       120 ~~~~-~~-----------------------------~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~  169 (246)
T PF08450_consen  120 IDPD-GK-----------------------------VTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGE  169 (246)
T ss_dssp             EETT-SE-----------------------------EEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCC
T ss_pred             ECCC-Ce-----------------------------EEEEecCcccccceEECCcchheeecccccceeEEEeccccccc
Confidence            5544 21                             122222234578999999999875 55667888888885  231


Q ss_pred             E--EEEE---ecCCCceEEEEEcCCCCEEEccc
Q psy11015        326 I--LQSL---TEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       326 ~--~~~l---~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      .  ...+   ....+..-.+++..+|++.++..
T Consensus       170 ~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~  202 (246)
T PF08450_consen  170 LSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW  202 (246)
T ss_dssp             EEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE
T ss_pred             eeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc
Confidence            1  1222   22223477899999998777643

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG0882|consensus

Probab=97.73  E-value=7.8e-05  Score=67.30  Aligned_cols=178  Identities=14%  Similarity=0.084  Sum_probs=116.9

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC--C-eEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CCcEEEEEcccC
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--G-KCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIWQAVIN  254 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~--~-~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~~i~vwd~~~~  254 (360)
                      |++.|+.+...- .+++.+++.||.++.|--..  | +.+..+..|-+.|.+++.+-+|.++.|++. |..++++|+..-
T Consensus         8 hrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~   86 (558)
T KOG0882|consen    8 HRDVITHVFPTK-AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF   86 (558)
T ss_pred             ccceeeeEeeeh-hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence            777787765543 45999999999999998643  2 455666788899999999999999999777 999999998754


Q ss_pred             eeEeeeCCCCCCCCCCCCCC-------------CCC-------ccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC
Q psy11015        255 WECLVSNNDNDSDLDESKEP-------------DES-------SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR  314 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~-------------~~~-------~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg  314 (360)
                      .....+.....+....+...             .+.       ..........-.-|..+|..+.++|-++.+++....|
T Consensus        87 DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~g  166 (558)
T KOG0882|consen   87 DMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISG  166 (558)
T ss_pred             chhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccc
Confidence            32211111111111110000             000       0111122333345889999999999999999999999


Q ss_pred             cEEEEECCC------CeE---------EEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        315 VANLFDVET------GTI---------LQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       315 ~i~iwd~~~------~~~---------~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      .|.-|....      ...         +..+.......+++.|+|+|..+++-+ |..|
T Consensus       167 mVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkV  225 (558)
T KOG0882|consen  167 MVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKV  225 (558)
T ss_pred             eeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEE
Confidence            999998762      111         111223355678999999998777544 4333

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.73  E-value=0.00011  Score=63.47  Aligned_cols=150  Identities=19%  Similarity=0.248  Sum_probs=98.3

Q ss_pred             CEEEEEECCCCC--EEEEEeCCCcEEEEECCCCe-------------------E-----------------------EEE
Q psy11015        182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGK-------------------C-----------------------VLQ  217 (360)
Q Consensus       182 ~V~~l~~~~~~~--~l~sgs~Dg~v~iwd~~~~~-------------------~-----------------------~~~  217 (360)
                      .|..+.|..++.  .++..+.|++|++|.+....                   +                       .+.
T Consensus        87 Kin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rv  166 (460)
T COG5170          87 KINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRV  166 (460)
T ss_pred             HhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEecccee
Confidence            477887765433  67778899999999874220                   0                       011


Q ss_pred             E-eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC-----
Q psy11015        218 Y-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH-----  291 (360)
Q Consensus       218 ~-~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----  291 (360)
                      + ..|..-++++.|+.|...++++ .|=.|.+|++.....+..                         +..+..|     
T Consensus       167 yaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFn-------------------------IVDiKP~nmeeL  220 (460)
T COG5170         167 YANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFN-------------------------IVDIKPHNMEEL  220 (460)
T ss_pred             ccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceE-------------------------EEeccCccHHHH
Confidence            2 3577789999999888877764 567899998764322211                         2222333     


Q ss_pred             CCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeE------EE----------EEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        292 SNVVIAADWLSDG-EQVITASWDRVANLFDVETGTI------LQ----------SLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       292 ~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~------~~----------~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ...|++..|+|.. ..+.-.+..|.|++-|++....      +.          -+.+-..+|..+.|+++|+++++-..
T Consensus       221 teVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy  300 (460)
T COG5170         221 TEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY  300 (460)
T ss_pred             HHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc
Confidence            3468899999954 4555566789999999983221      10          11122457889999999999998766


Q ss_pred             cch
Q psy11015        355 LAI  357 (360)
Q Consensus       355 ~~i  357 (360)
                      .++
T Consensus       301 ltv  303 (460)
T COG5170         301 LTV  303 (460)
T ss_pred             ceE
Confidence            554

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.71  E-value=0.0052  Score=55.90  Aligned_cols=110  Identities=13%  Similarity=0.143  Sum_probs=78.6

Q ss_pred             CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC----------CCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015        202 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG----------DKSVHIWQAVINWECLVSNNDNDSDLDES  271 (360)
Q Consensus       202 g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~----------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  271 (360)
                      ++|.+.|..+++.+..+..-..+ ..+ ++|||+.++.+..          +..|.+||..+......+.....      
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~------   98 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEG------   98 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCC------
Confidence            89999999999998888744333 234 9999998877655          78899999998855433211100      


Q ss_pred             CCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEEecCC
Q psy11015        272 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l~~h~  334 (360)
                                  |.  +. .......++++|||++++....  +..|-++|+.+++.+.++....
T Consensus        99 ------------p~--~~-~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~  148 (352)
T TIGR02658        99 ------------PR--FL-VGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD  148 (352)
T ss_pred             ------------ch--hh-ccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC
Confidence                        00  00 1123446889999999987763  6889999999999998887543

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG4640|consensus

Probab=97.66  E-value=0.00025  Score=66.79  Aligned_cols=93  Identities=18%  Similarity=0.199  Sum_probs=74.3

Q ss_pred             cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEE-EEEEc
Q psy11015        223 GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI-AADWL  301 (360)
Q Consensus       223 ~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~i~~s  301 (360)
                      ..+.-+.|+|.-.++|.+..+|.+.+..+.                             +..+.++.-|...++ +++|.
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-----------------------------~qRlwtip~p~~~v~~sL~W~   71 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-----------------------------WQRLWTIPIPGENVTASLCWR   71 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec-----------------------------cceeEeccCCCCccceeeeec
Confidence            457789999999999999999999888765                             224555554555666 99999


Q ss_pred             CCCCEEEEEECCCcEEEEECCCCeEEEEEe-cCCCceEEEEEcC
Q psy11015        302 SDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRT  344 (360)
Q Consensus       302 p~g~~l~tgs~dg~i~iwd~~~~~~~~~l~-~h~~~v~~~~~~~  344 (360)
                      |||+.+|.|-.||+|++.|+.+|..+.... .....|.++.|++
T Consensus        72 ~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   72 PDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             CCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence            999999999999999999999998877632 2456788888863

>KOG2114|consensus

Probab=97.65  E-value=0.0028  Score=62.00  Aligned_cols=160  Identities=15%  Similarity=0.175  Sum_probs=104.6

Q ss_pred             ceeeeeeeecCCCC-EEEEEECCCCCEEEEEeCCCc-----EEEEECCCC------eEE---EEEe----CCCcCeEEEE
Q psy11015        169 SCYKIRSFSGHRDG-VWDVAVRPGQPVLGSASADRT-----VRLWSTQTG------KCV---LQYS----GHSGSVNSVR  229 (360)
Q Consensus       169 ~~~~~~~l~~h~~~-V~~l~~~~~~~~l~sgs~Dg~-----v~iwd~~~~------~~~---~~~~----~h~~~v~~i~  229 (360)
                      +.+.++.++++... |..+-...+.++|++-+.|+.     ++||+++..      .++   ..+.    ....++.+++
T Consensus        53 s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~  132 (933)
T KOG2114|consen   53 SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLA  132 (933)
T ss_pred             cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEE
Confidence            34556788888877 444444444468999888865     899999632      333   2221    1345788999


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      .+.+-..+|.|-.+|.|..+.=.-.+                        ..+....-......+|+++++..++..++-
T Consensus       133 Vs~~l~~Iv~Gf~nG~V~~~~GDi~R------------------------Drgsr~~~~~~~~~pITgL~~~~d~~s~lF  188 (933)
T KOG2114|consen  133 VSEDLKTIVCGFTNGLVICYKGDILR------------------------DRGSRQDYSHRGKEPITGLALRSDGKSVLF  188 (933)
T ss_pred             EEccccEEEEEecCcEEEEEcCcchh------------------------ccccceeeeccCCCCceeeEEecCCceeEE
Confidence            99998899999999999887421100                        001111122233568999999988887322


Q ss_pred             EECCCcEEEEECCCCe-EEEEEecCCCceEEEEEcCCCC-EEEcc
Q psy11015        310 ASWDRVANLFDVETGT-ILQSLTEPGEAIRAAAGRTGGP-IRASP  352 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~-~~~~l~~h~~~v~~~~~~~~g~-~las~  352 (360)
                      +..-..|.+|.+.... ....+..|+.++.|.++++... +++++
T Consensus       189 v~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~  233 (933)
T KOG2114|consen  189 VATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG  233 (933)
T ss_pred             EEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec
Confidence            2233568899987333 2555788889999999987655 55554

>KOG4649|consensus

Probab=97.61  E-value=0.0055  Score=52.03  Aligned_cols=130  Identities=13%  Similarity=0.032  Sum_probs=86.4

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES  271 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  271 (360)
                      ..+++.||-.+.+..-|..+|+....-. -...+.+-+.- -|++++.|...|.+.+.+..+|..+..            
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~------------   88 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWN------------   88 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheee------------
Confidence            3478888888888888988887655432 22333333322 578899999999999999998854432            


Q ss_pred             CCCCCCccccccceeEeeCC-CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcC-CCCEE
Q psy11015        272 KEPDESSITLRTPVKELLGH-SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT-GGPIR  349 (360)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~h-~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~-~g~~l  349 (360)
                                      +... .-.+ .....+++..+..|+.|++.+..|.++..++...+-..+--.+-+..| ++.+.
T Consensus        89 ----------------f~~~~~vk~-~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly  151 (354)
T KOG4649|consen   89 ----------------FVILETVKV-RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLY  151 (354)
T ss_pred             ----------------eeehhhhcc-ceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEE
Confidence                            1111 1112 233466899999999999999999999988887764444333344454 44444


Q ss_pred             Ecc
Q psy11015        350 ASP  352 (360)
Q Consensus       350 as~  352 (360)
                      ++.
T Consensus       152 ~a~  154 (354)
T KOG4649|consen  152 AAI  154 (354)
T ss_pred             EEe
Confidence            433

>KOG3617|consensus

Probab=97.60  E-value=0.00011  Score=71.25  Aligned_cols=111  Identities=15%  Similarity=0.216  Sum_probs=82.7

Q ss_pred             CEEE-EEECCCCCEEEEEeC----CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015        182 GVWD-VAVRPGQPVLGSASA----DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       182 ~V~~-l~~~~~~~~l~sgs~----Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      .|.. .+|+|..++++.++-    .|.|.||- ++|++-.... ..-.+.+++|+|..-.+++|-.-|.+.+|...+.  
T Consensus        16 avsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~--   91 (1416)
T KOG3617|consen   16 AVSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTT--   91 (1416)
T ss_pred             ccccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCc--
Confidence            3433 469999998888764    47888875 5565433222 1223567999999888899988999999986543  


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                                                ........|..+|..+.||++|..++|+..=|.+.+|...
T Consensus        92 --------------------------e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   92 --------------------------ETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             --------------------------eeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence                                      1122334699999999999999999999999999999765

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.59  E-value=0.0046  Score=58.27  Aligned_cols=141  Identities=14%  Similarity=0.113  Sum_probs=80.6

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~  253 (360)
                      +.+....-....++++|+|++++. +.||...|+.....+....     +.-..+.|.+.+ .+|+-...++|.++.--+
T Consensus        26 k~lg~~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~~-----G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~   98 (443)
T PF04053_consen   26 KELGSCEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKAF-----GSGLSFVWSSRN-RYAVLESSSTIKIYKNFK   98 (443)
T ss_dssp             EEEEE-SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEEE-----EE-SEEEE-TSS-EEEEE-TTS-EEEEETTE
T ss_pred             ccCCCCCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCccccc-----CceeEEEEecCc-cEEEEECCCeEEEEEcCc
Confidence            344444556789999999998877 5678888888655554333     233467898855 466767788899974221


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP  333 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h  333 (360)
                      +                            .....+.. ...+..+ |.  |..|+..+.+ .|.+||+.+++.+..+...
T Consensus        99 ~----------------------------~~~k~i~~-~~~~~~I-f~--G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~  145 (443)
T PF04053_consen   99 N----------------------------EVVKSIKL-PFSVEKI-FG--GNLLGVKSSD-FICFYDWETGKLIRRIDVS  145 (443)
T ss_dssp             E-----------------------------TT------SS-EEEE-E---SSSEEEEETT-EEEEE-TTT--EEEEESS-
T ss_pred             c----------------------------ccceEEcC-CcccceE-Ec--CcEEEEECCC-CEEEEEhhHcceeeEEecC
Confidence            1                            11111211 1123333 21  7777776654 8999999999999999743


Q ss_pred             CCceEEEEEcCCCCEEEcccccc
Q psy11015        334 GEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las~~~~~  356 (360)
                        +|..+.|+++|.++|-.+..+
T Consensus       146 --~vk~V~Ws~~g~~val~t~~~  166 (443)
T PF04053_consen  146 --AVKYVIWSDDGELVALVTKDS  166 (443)
T ss_dssp             --E-EEEEE-TTSSEEEEE-S-S
T ss_pred             --CCcEEEEECCCCEEEEEeCCe
Confidence              489999999999988766544

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=97.55  E-value=0.0048  Score=53.11  Aligned_cols=118  Identities=15%  Similarity=0.119  Sum_probs=77.7

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC
Q psy11015        191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE  270 (360)
Q Consensus       191 ~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~  270 (360)
                      ++..+++++.++.+..||..+|+.+..+.. .+.+.... ...+..++.++.++.+..+|..+|.......         
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~---------  103 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIY---------  103 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEE---------
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeec---------
Confidence            355788889999999999999998888774 22222212 2245566777788899999999886554310         


Q ss_pred             CCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCC
Q psy11015        271 SKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~  334 (360)
                                    ........ ..........+..++.+..+|.|..+|..+|+.+.......
T Consensus       104 --------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~  152 (238)
T PF13360_consen  104 --------------LTSSPPAG-VRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGE  152 (238)
T ss_dssp             --------------E-SSCTCS-TB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred             --------------cccccccc-cccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence                          00000000 11111222248888999989999999999999988776543

...

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.52  E-value=0.017  Score=42.74  Aligned_cols=65  Identities=17%  Similarity=0.162  Sum_probs=48.9

Q ss_pred             EEEEEEC---CCC-CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        183 VWDVAVR---PGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       183 V~~l~~~---~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      |.+|++.   -+| +.|+.||.|..||+|+-.  ..+..+. -.+.|.+++-... ..|+.+..+|+|-+|+-
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~   70 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDR   70 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence            5566643   343 489999999999999854  6667776 4567778777655 56888999999999875

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.48  E-value=0.022  Score=49.08  Aligned_cols=69  Identities=10%  Similarity=0.205  Sum_probs=46.8

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCC--eEEEEEe---CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        185 DVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYS---GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~~---~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      .++.+.+|++||.- .|..|-|-..+..  .++...+   .-...=+.++|+||+.+||.+...|+|++||+...
T Consensus         2 ~~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~   75 (282)
T PF15492_consen    2 HLALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGS   75 (282)
T ss_pred             ceeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccc
Confidence            45667777665544 4667777665543  2223322   12223568999999999999999999999998753

>KOG2395|consensus

Probab=97.45  E-value=0.0018  Score=60.04  Aligned_cols=139  Identities=16%  Similarity=0.156  Sum_probs=95.2

Q ss_pred             ECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-------EEEEEeCCCcEEEEEcccCeeEee
Q psy11015        188 VRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-------LVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       188 ~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-------~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      ...+.+ +|.++..-..++--|++.|+.+..+.-|.. |+-+.+.|+..       .-+.|-.|..|+-||.+....   
T Consensus       341 ~~~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~---  416 (644)
T KOG2395|consen  341 HRADSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGK---  416 (644)
T ss_pred             hccccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCc---
Confidence            334444 455566667788889999999999997765 77778887643       224567788899999874311   


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCC----CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE-EEEecCC
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHS----NVVIAADWLSDGEQVITASWDRVANLFDVETGTIL-QSLTEPG  334 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~-~~l~~h~  334 (360)
                                             ..+....+|.    ....|++-..+ .+||.||.+|.||+||- .+... .-+.+.+
T Consensus       417 -----------------------~kl~~~q~kqy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG  471 (644)
T KOG2395|consen  417 -----------------------NKLAVVQSKQYSTKNNFSCFATTES-GYIVVGSLKGDIRLYDR-IGRRAKTALPGLG  471 (644)
T ss_pred             -----------------------ceeeeeeccccccccccceeeecCC-ceEEEeecCCcEEeehh-hhhhhhhcccccC
Confidence                                   0122222221    23445554434 48999999999999996 55444 4467788


Q ss_pred             CceEEEEEcCCCCEEEccccc
Q psy11015        335 EAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       335 ~~v~~~~~~~~g~~las~~~~  355 (360)
                      .+|..+..+.+|.|+....+.
T Consensus       472 ~~I~hVdvtadGKwil~Tc~t  492 (644)
T KOG2395|consen  472 DAIKHVDVTADGKWILATCKT  492 (644)
T ss_pred             CceeeEEeeccCcEEEEeccc
Confidence            999999999999987765543

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.39  E-value=0.0041  Score=58.36  Aligned_cols=153  Identities=17%  Similarity=0.199  Sum_probs=92.0

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEe---CC-CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCC
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSAS---AD-RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDK  244 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs---~D-g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~  244 (360)
                      +.-.+.+..-...+..-+|+|++..++.-+   .. ..+.++++.+++...... ..+.-...+|+|||+.++ +...|+
T Consensus       182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg  260 (425)
T COG0823         182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDG  260 (425)
T ss_pred             CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCC
Confidence            444444555556677778999988544432   22 358999999886544443 333445678999998665 455676


Q ss_pred             c--EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCc--EEEE
Q psy11015        245 S--VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRV--ANLF  319 (360)
Q Consensus       245 ~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~--i~iw  319 (360)
                      .  |.+.|+..+.                             ...+....+.-..-.|+|+|++++-. +..|.  |.++
T Consensus       261 ~~~iy~~dl~~~~-----------------------------~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~  311 (425)
T COG0823         261 SPDIYLMDLDGKN-----------------------------LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLY  311 (425)
T ss_pred             CccEEEEcCCCCc-----------------------------ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEE
Confidence            5  4555655441                             12233333333467899999998654 44555  5555


Q ss_pred             ECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        320 DVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       320 d~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      |...+.. ..+......-..-.|+|+|.+++--.
T Consensus       312 ~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~  344 (425)
T COG0823         312 DLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFES  344 (425)
T ss_pred             CCCCCce-eEeeccCCCCcCccCCCCCCEEEEEe
Confidence            6554443 44443333333678999999877444

>KOG2114|consensus

Probab=97.37  E-value=0.0053  Score=60.11  Aligned_cols=139  Identities=12%  Similarity=0.132  Sum_probs=90.7

Q ss_pred             EECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCC-----cEEEEEcccCeeEeee
Q psy11015        187 AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDK-----SVHIWQAVINWECLVS  260 (360)
Q Consensus       187 ~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~-----~i~vwd~~~~~~~~~~  260 (360)
                      +|++.+..++.|+.||.|.+.+- .-+.+..|+.+...+...-|.-++ .+|++.+.|+     .+++|++.......  
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~--  106 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN--  106 (933)
T ss_pred             EEcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC--
Confidence            36777889999999999888773 234557777777773344444444 6777777665     48999987431100  


Q ss_pred             CCCCCCCCCCCCCCCCCccccccce--eEeeC-----CCCcEEEEEEcCCCCEEEEEECCCcEEEEECC----CCeEEEE
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPV--KELLG-----HSNVVIAADWLSDGEQVITASWDRVANLFDVE----TGTILQS  329 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~----~~~~~~~  329 (360)
                                          ...++  ..+.+     ...++.+++.+.+-..+|.|-.||.|..+.-.    .|....-
T Consensus       107 --------------------sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~  166 (933)
T KOG2114|consen  107 --------------------SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDY  166 (933)
T ss_pred             --------------------CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceee
Confidence                                00111  11112     34578899999898899999999999888422    1222222


Q ss_pred             EecCCCceEEEEEcCCCCE
Q psy11015        330 LTEPGEAIRAAAGRTGGPI  348 (360)
Q Consensus       330 l~~h~~~v~~~~~~~~g~~  348 (360)
                      ......+||++++..+|..
T Consensus       167 ~~~~~~pITgL~~~~d~~s  185 (933)
T KOG2114|consen  167 SHRGKEPITGLALRSDGKS  185 (933)
T ss_pred             eccCCCCceeeEEecCCce
Confidence            2234679999999888865

>KOG1275|consensus

Probab=97.35  E-value=0.0012  Score=64.76  Aligned_cols=108  Identities=15%  Similarity=0.190  Sum_probs=83.1

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES  271 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  271 (360)
                      +..++-|+--..+..+|+++++..+...-..+.|.=++.  +++++.+|...|+|.+-|.++.                 
T Consensus       147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~-----------------  207 (1118)
T KOG1275|consen  147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSF-----------------  207 (1118)
T ss_pred             CcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcC-----------------
Confidence            335666777777888899988777666544444555554  6789999999999999998755                 


Q ss_pred             CCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC---------CCcEEEEECCCCeEEEEEe
Q psy11015        272 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW---------DRVANLFDVETGTILQSLT  331 (360)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~---------dg~i~iwd~~~~~~~~~l~  331 (360)
                                 .+++++..|++.|..+..  .|+.|+|+|.         |..|+|||+++.+.+..+.
T Consensus       208 -----------~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~  263 (1118)
T KOG1275|consen  208 -----------ETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ  263 (1118)
T ss_pred             -----------ceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcc
Confidence                       568899999999987766  7999999875         5678999999877665544

>KOG1008|consensus

Probab=97.31  E-value=5.7e-05  Score=71.08  Aligned_cols=142  Identities=18%  Similarity=0.120  Sum_probs=93.9

Q ss_pred             eeecCCCCEEEEEECCC-CCEEEEEe----CCCcEEEEECCCC--eEE--EEEeC-CCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        175 SFSGHRDGVWDVAVRPG-QPVLGSAS----ADRTVRLWSTQTG--KCV--LQYSG-HSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~-~~~l~sgs----~Dg~v~iwd~~~~--~~~--~~~~~-h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      ...+|....++++|++- .+.||.|-    .|..+.|||+.++  .+.  ..|.+ ......+++|-.+.+++++|...+
T Consensus        97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr  176 (783)
T KOG1008|consen   97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSR  176 (783)
T ss_pred             ecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccc
Confidence            34578889999999984 45666663    3567999999876  221  22222 334566889988888999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEEC-C
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDV-E  322 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~-~  322 (360)
                      .++++|++...                             .....-.+..|..+...| .++|+++-. ||.|-+||. +
T Consensus       177 ~~~ifdlRqs~-----------------------------~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~r  226 (783)
T KOG1008|consen  177 SVHIFDLRQSL-----------------------------DSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYR  226 (783)
T ss_pred             hhhhhhhhhhh-----------------------------hhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchh
Confidence            99999987431                             111111233566677777 777887665 999999993 3


Q ss_pred             CC-eEEEEEecCCC----ceEEEEEcCCC
Q psy11015        323 TG-TILQSLTEPGE----AIRAAAGRTGG  346 (360)
Q Consensus       323 ~~-~~~~~l~~h~~----~v~~~~~~~~g  346 (360)
                      .- .++..+.....    .+..++|.|..
T Consensus       227 nienpl~~i~~~~N~~~~~l~~~aycPtr  255 (783)
T KOG1008|consen  227 NIENPLQIILRNENKKPKQLFALAYCPTR  255 (783)
T ss_pred             hhccHHHHHhhCCCCcccceeeEEeccCC
Confidence            32 22233322222    48999999864

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.26  E-value=0.0071  Score=56.77  Aligned_cols=139  Identities=15%  Similarity=0.124  Sum_probs=80.9

Q ss_pred             EEEECCCCC-EEEEEeCCCc--EEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE-eCCCcEEEEE--cccCeeEe
Q psy11015        185 DVAVRPGQP-VLGSASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKSVHIWQ--AVINWECL  258 (360)
Q Consensus       185 ~l~~~~~~~-~l~sgs~Dg~--v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~-s~d~~i~vwd--~~~~~~~~  258 (360)
                      .-+|+|||+ ++++...||.  |.+.|+..+. +..+..-.+.-..-.|+|+|+.++-. +..|.-.||-  ...+    
T Consensus       242 ~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~----  316 (425)
T COG0823         242 APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGS----  316 (425)
T ss_pred             CccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCC----
Confidence            347999998 5566677776  4555666555 33344333334467799999877554 4556555554  3322    


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CCc--EEEEECCCCeEEEEEecCCC
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRV--ANLFDVETGTILQSLTEPGE  335 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg~--i~iwd~~~~~~~~~l~~h~~  335 (360)
                                               ....++...+.-..-.|+|+|++++..+. +|.  |.+.|..++..+..+. +..
T Consensus       317 -------------------------~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~  370 (425)
T COG0823         317 -------------------------QVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STY  370 (425)
T ss_pred             -------------------------ceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccc
Confidence                                     12223222222226789999999987664 344  6666776665444443 222


Q ss_pred             ceEEEEEcCCCCEEEcccc
Q psy11015        336 AIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~~~  354 (360)
                      ....-.|.++|..+.....
T Consensus       371 ~~e~ps~~~ng~~i~~~s~  389 (425)
T COG0823         371 LNESPSWAPNGRMIMFSSG  389 (425)
T ss_pred             cCCCCCcCCCCceEEEecc
Confidence            3344567777776664443

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.23  E-value=0.014  Score=56.41  Aligned_cols=136  Identities=12%  Similarity=0.009  Sum_probs=84.9

Q ss_pred             CCcEEEEECCC----C-eEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCC
Q psy11015        201 DRTVRLWSTQT----G-KCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEP  274 (360)
Q Consensus       201 Dg~v~iwd~~~----~-~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~  274 (360)
                      ++.|.+.|..+    + ..+..+. -....+.+.++|||+++++++ .+.++.|.|+.+......-..            
T Consensus       295 gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~------------  361 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKI------------  361 (635)
T ss_pred             CCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccC------------
Confidence            45688888887    3 3444443 556778999999999876655 589999999987533211000            


Q ss_pred             CCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC----------CeEEEEEecCCCceEEE----
Q psy11015        275 DESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET----------GTILQSLTEPGEAIRAA----  340 (360)
Q Consensus       275 ~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~----------~~~~~~l~~h~~~v~~~----  340 (360)
                          ......+.+..- .......+|.++|....|--.|..|..||+.+          ...+..+.-|-++-.-.    
T Consensus       362 ----~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g  436 (635)
T PRK02888        362 ----KPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMG  436 (635)
T ss_pred             ----CccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCC
Confidence                000011222222 22345678999998888888899999999875          23444454443332222    


Q ss_pred             -EEcCCCCEEEcccc
Q psy11015        341 -AGRTGGPIRASPLL  354 (360)
Q Consensus       341 -~~~~~g~~las~~~  354 (360)
                       .-.|+|+|+++...
T Consensus       437 ~t~~~dgk~l~~~nk  451 (635)
T PRK02888        437 ETKEADGKWLVSLNK  451 (635)
T ss_pred             CcCCCCCCEEEEccc
Confidence             23789999987654

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.20  E-value=0.047  Score=51.27  Aligned_cols=55  Identities=7%  Similarity=-0.043  Sum_probs=40.7

Q ss_pred             CcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC-CCceEEEEEcCCCC
Q psy11015        293 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP-GEAIRAAAGRTGGP  347 (360)
Q Consensus       293 ~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h-~~~v~~~~~~~~g~  347 (360)
                      +++..++.||+|+++|.-..+|.+.+....-.+.+..+... ......++|..+.-
T Consensus       217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da  272 (410)
T PF04841_consen  217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA  272 (410)
T ss_pred             CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence            57999999999999999999999999987666655555433 33456666665443

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=97.18  E-value=0.013  Score=54.43  Aligned_cols=107  Identities=21%  Similarity=0.119  Sum_probs=73.8

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES  271 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  271 (360)
                      +..++.++.+|.|..+|..+|+.+..+.-.......+..  ++..++.++.++.+..||..+|........         
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~---------  133 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKL---------  133 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeecc---------
Confidence            558889999999999999999988776643322222322  567788889999999999988865543111         


Q ss_pred             CCCCCCccccccceeEeeCCCCcEEE-EEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        272 KEPDESSITLRTPVKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~h~~~v~~-i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                                          .+.+.+ ...  .+..++.++.+|.+..||..+|+.+..+.
T Consensus       134 --------------------~~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~  172 (377)
T TIGR03300       134 --------------------SSEVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYS  172 (377)
T ss_pred             --------------------CceeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEc
Confidence                                011111 111  34567777889999999999998776654

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1008|consensus

Probab=97.10  E-value=0.00013  Score=68.74  Aligned_cols=152  Identities=16%  Similarity=0.128  Sum_probs=100.3

Q ss_pred             CCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEeeC-CCEEEEEe----CCCcEEEEE
Q psy11015        180 RDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPN-KDLVLSAS----GDKSVHIWQ  250 (360)
Q Consensus       180 ~~~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p~-~~~l~s~s----~d~~i~vwd  250 (360)
                      ...+.|+++..+  ...++.|.++|.|-+-.++...  .-....+|....++++|++- .+.||+|-    .|..+.|||
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd  135 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD  135 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence            345677775443  3488999999999998876432  12344567888999999984 45555552    245789999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQ  328 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~  328 (360)
                      +.++...+.                        ....+. +......+++|..+.+.+.+|...+.++++|++.. ....
T Consensus       136 i~s~ltvPk------------------------e~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~  191 (783)
T KOG1008|consen  136 INSLLTVPK------------------------ESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVS  191 (783)
T ss_pred             cccccCCCc------------------------cccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhh
Confidence            987632110                        000111 12234558999988889999999999999999832 2222


Q ss_pred             EEecCCCceEEEEEcC-CCCEEEcccccch
Q psy11015        329 SLTEPGEAIRAAAGRT-GGPIRASPLLLAI  357 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~-~g~~las~~~~~i  357 (360)
                      .+  ....+..+...| .+.++|+..++.|
T Consensus       192 sv--nTk~vqG~tVdp~~~nY~cs~~dg~i  219 (783)
T KOG1008|consen  192 SV--NTKYVQGITVDPFSPNYFCSNSDGDI  219 (783)
T ss_pred             hh--hhhhcccceecCCCCCceeccccCce
Confidence            22  234566677888 7888888887654

>KOG3617|consensus

Probab=97.06  E-value=0.0069  Score=59.37  Aligned_cols=111  Identities=14%  Similarity=0.182  Sum_probs=81.5

Q ss_pred             cccCCCcccceeeeeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy11015        137 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL  216 (360)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~  216 (360)
                      .+..|+.... .+..|....++.+.+|....+.. .-.++.-|   +.+++|+|..-.|+.|-.-|.+.+|...+.+.-.
T Consensus        21 ~SWHPsePlf-AVA~fS~er~GSVtIfadtGEPq-r~Vt~P~h---atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~ht   95 (1416)
T KOG3617|consen   21 SSWHPSEPLF-AVASFSPERGGSVTIFADTGEPQ-RDVTYPVH---ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHT   95 (1416)
T ss_pred             cccCCCCcee-EEEEecCCCCceEEEEecCCCCC-ccccccee---hhhhccChHHHHHhhccccceeEEEecCCceeee
Confidence            3344443332 23455666667777776654422 22222223   4569999998899999999999999988776666


Q ss_pred             EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015        217 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       217 ~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~  252 (360)
                      ....|..+|..+.|+|+|..++++..-|.+.+|...
T Consensus        96 v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   96 VVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            666799999999999999999999999999999875

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.99  E-value=0.12  Score=48.58  Aligned_cols=114  Identities=17%  Similarity=0.132  Sum_probs=68.4

Q ss_pred             EEEEECCCCCEEEEE-eCCC----cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC-----------cEE
Q psy11015        184 WDVAVRPGQPVLGSA-SADR----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK-----------SVH  247 (360)
Q Consensus       184 ~~l~~~~~~~~l~sg-s~Dg----~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~-----------~i~  247 (360)
                      ...+++|++++++-+ +..|    +++++|+++|+.+...-.... ...+.|.++++.|+-...+.           .|.
T Consensus       127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~-~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~  205 (414)
T PF02897_consen  127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPK-FSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY  205 (414)
T ss_dssp             EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEE-SEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred             eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccc-cceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence            356799999977654 4444    599999999976653311111 22499999988776655443           266


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC-C-cEEEEEEcCCCCEEEEEECC----CcEEEEEC
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS-N-VVIAADWLSDGEQVITASWD----RVANLFDV  321 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~-~v~~i~~sp~g~~l~tgs~d----g~i~iwd~  321 (360)
                      .|++-++...                          ....+.+.. . ....+.+++++++++..+..    ..+.+.|+
T Consensus       206 ~~~~gt~~~~--------------------------d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~  259 (414)
T PF02897_consen  206 RHKLGTPQSE--------------------------DELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDL  259 (414)
T ss_dssp             EEETTS-GGG---------------------------EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEEC
T ss_pred             EEECCCChHh--------------------------CeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEec
Confidence            6666544111                          112222222 2 25678899999998654332    34788888


Q ss_pred             CCC
Q psy11015        322 ETG  324 (360)
Q Consensus       322 ~~~  324 (360)
                      ..+
T Consensus       260 ~~~  262 (414)
T PF02897_consen  260 DDG  262 (414)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF08145 BOP1NT: BOP1NT (NUC169) domain; InterPro: IPR012953 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=96.98  E-value=0.00016  Score=61.54  Aligned_cols=66  Identities=26%  Similarity=0.444  Sum_probs=55.9

Q ss_pred             HHHHhHHhhhh---HHHHHHHHhhcccccccccccCCCCCCcchhhcccc---CcccccccccCCCccccee
Q psy11015         83 EFELLYLENLN---LQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNK---NFNKQKVLASNPSAQKLKT  148 (360)
Q Consensus        83 e~~~l~~e~~~---l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  148 (360)
                      +++.+..+...   ++++++.|+.++++..++.++|.||+++++|.+...   +.+++.+++++|+...+++
T Consensus       187 ~w~~~~pedR~~~fiP~k~~sLR~Vp~Y~~~i~ErFeRCLDLYLcPR~~k~rlnidPesLlPkLP~p~dLrP  258 (260)
T PF08145_consen  187 EWEEMDPEDRKKNFIPQKFDSLRKVPAYENFIKERFERCLDLYLCPRVRKKRLNIDPESLLPKLPSPKDLRP  258 (260)
T ss_pred             HHHhcCchhccccccchhhhhhhccchHHHHHHHHHHHhhhhhcCcHhhcccCCCCHHHhCCCCcChHhcCC
Confidence            55555444444   899999999999999999999999999999988865   7889999999999887765

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This N-terminal domain is found in BOP1-like WD40 proteins. Bop1 is a nucleolar protein involved in rRNA processing, thereby controlling the cell cycle []. It is required for the maturation of the 25S and 5.8S ribosomal RNAs. It may serve as an essential factor in ribosome formation that coordinates processing of the spacer regions in pre-rRNA. The Pes1-Bop1 complex has several components: BOP1, GRWD1, PES1, ORC6L, and RPL3 and is involved in ribosome biogenesis and altered chromosome segregation. The overexpression of BOP1 increases the percentage of multipolar spindles in human cells. Deregulation of the BOP1 pathway may contribute to colorectal tumourigenesis in humans []. Elevated levels of Bop1 induces Bop1/WDR12 and Bop1/Pes1 subcomplexes and the assembly and integrity of the PeBoW complex is highly sensitive to changes in Bop1 protein levels []. Nop7p-Erb1p-Ytm1p, found in yeast, is potentially the homologous complex of Pes1-Bop1-WDR12 as it is involved in the control of ribosome biogenesis and S phase entry. The integrity of the PeBoW complex is required for ribosome biogenesis and cell proliferation in mammalian cells []. In Giardia, the species specific cytoskeleton protein, beta-giardin, interacts with Bop1 []. ; GO: 0006364 rRNA processing, 0005634 nucleus

>KOG4499|consensus

Probab=96.95  E-value=0.15  Score=43.00  Aligned_cols=139  Identities=17%  Similarity=0.107  Sum_probs=84.5

Q ss_pred             CCCEEEEEECCCCCEEEEEeCC---------CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVHIW  249 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~D---------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vw  249 (360)
                      ..+.+.-.++|+|++++-.-+|         |.++.|-..  ..+..+...-+--+.++|+.+...+ +.-+.+-+|.-|
T Consensus       108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~--h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~  185 (310)
T KOG4499|consen  108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAG--HQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAY  185 (310)
T ss_pred             hcccccCccCCCCceeeeeeccccccccccccEEEEeccC--CCceeeehhccCCccccccccCcEEEEEccCceEEeee
Confidence            3455666789999874433333         334444332  2222333334445678898766544 556778888888


Q ss_pred             Ec--ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC----CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        250 QA--VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG----HSNVVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       250 d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      |.  .+|...                       ....+..+..    .+...-.++..-+|...++.-..|+|...|..+
T Consensus       186 dyd~~tG~~s-----------------------nr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~t  242 (310)
T KOG4499|consen  186 DYDCPTGDLS-----------------------NRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTT  242 (310)
T ss_pred             ecCCCccccc-----------------------CcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCC
Confidence            84  343111                       1111211211    011122344455788888887889999999999


Q ss_pred             CeEEEEEecCCCceEEEEEc
Q psy11015        324 GTILQSLTEPGEAIRAAAGR  343 (360)
Q Consensus       324 ~~~~~~l~~h~~~v~~~~~~  343 (360)
                      |+.+.+++-+...|++++|-
T Consensus       243 GK~L~eiklPt~qitsccFg  262 (310)
T KOG4499|consen  243 GKILLEIKLPTPQITSCCFG  262 (310)
T ss_pred             CcEEEEEEcCCCceEEEEec
Confidence            99999999999999999995

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.95  E-value=0.039  Score=49.42  Aligned_cols=150  Identities=15%  Similarity=0.133  Sum_probs=97.5

Q ss_pred             CCEEEEEECCCCCEEEEEeC------C---CcEEEEECC-CCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcEEEE
Q psy11015        181 DGVWDVAVRPGQPVLGSASA------D---RTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIW  249 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~------D---g~v~iwd~~-~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i~vw  249 (360)
                      ..-+.+.+.|+|.+-++...      +   ..-.+|-+. .+..+..+.++-..-+.|+|+||++.++.+. ..+.|.-|
T Consensus       111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~  190 (307)
T COG3386         111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY  190 (307)
T ss_pred             CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence            34567788899886665443      1   122455555 5666777777677788999999997766654 45778877


Q ss_pred             Eccc-CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC-cEEEEECCCCeEE
Q psy11015        250 QAVI-NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-VANLFDVETGTIL  327 (360)
Q Consensus       250 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg-~i~iwd~~~~~~~  327 (360)
                      ++.. ...                      .........+....+..-.++...+|.+.+++.++| .|..|+.. |+.+
T Consensus       191 ~~d~~~g~----------------------~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~  247 (307)
T COG3386         191 DLDPATGP----------------------IGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLL  247 (307)
T ss_pred             ecCcccCc----------------------cCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEE
Confidence            7652 100                      000011222223455666778888898887666665 89999987 9999


Q ss_pred             EEEecCCCceEEEEEcC-CC-CEEEccc
Q psy11015        328 QSLTEPGEAIRAAAGRT-GG-PIRASPL  353 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~-~g-~~las~~  353 (360)
                      ..+.-+...+++++|-. +. .+++|+.
T Consensus       248 ~~i~lP~~~~t~~~FgG~~~~~L~iTs~  275 (307)
T COG3386         248 GEIKLPVKRPTNPAFGGPDLNTLYITSA  275 (307)
T ss_pred             EEEECCCCCCccceEeCCCcCEEEEEec
Confidence            99988867888899853 33 3444444

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.95  E-value=0.028  Score=55.09  Aligned_cols=151  Identities=15%  Similarity=0.145  Sum_probs=82.8

Q ss_pred             CCCEEEEEECCCCCEEEEEe------CCCcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC-CcEEEEEc
Q psy11015        180 RDGVWDVAVRPGQPVLGSAS------ADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD-KSVHIWQA  251 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs------~Dg~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d-~~i~vwd~  251 (360)
                      ...+.+.+++|+|..++..-      .|+.-.+|-... +.......+.  ....-.|+|+|..+++.+.. ..+++.+-
T Consensus       349 ~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~~  426 (591)
T PRK13616        349 MGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIRD  426 (591)
T ss_pred             ccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCC--CCCCceECCCCCceEEEecCcceEEEecc
Confidence            34677889999999766554      344444444332 2222223332  37889999998888777543 22333322


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEE---EECCCCe-EE
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANL---FDVETGT-IL  327 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~i---wd~~~~~-~~  327 (360)
                      ...........                 .......   ...+.|.++.|||||..++... +|.|.+   -....|. .+
T Consensus       427 ~~~gql~~~~v-----------------d~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l  485 (591)
T PRK13616        427 PATGQLARTPV-----------------DASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYAL  485 (591)
T ss_pred             CCCceEEEEec-----------------cCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceee
Confidence            11111110000                 0000111   2345799999999999987665 477766   3434453 11


Q ss_pred             ---EEEec-CCCceEEEEEcCCCCEEEccc
Q psy11015        328 ---QSLTE-PGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       328 ---~~l~~-h~~~v~~~~~~~~g~~las~~  353 (360)
                         ..+.. -...+.+++|.+++.+++...
T Consensus       486 ~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~  515 (591)
T PRK13616        486 TNPREVGPGLGDTAVSLDWRTGDSLVVGRS  515 (591)
T ss_pred             cccEEeecccCCccccceEecCCEEEEEec
Confidence               11222 233468899999998776433

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.95  E-value=0.039  Score=55.26  Aligned_cols=70  Identities=9%  Similarity=0.153  Sum_probs=53.5

Q ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015        181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~  252 (360)
                      ....|++...+| +||.|+.+|.||+||--..+....+.+...+|..|..+.||+++++. .+..+.+++..
T Consensus       578 ~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaT-c~tyLlLi~t~  647 (794)
T PF08553_consen  578 NNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILAT-CKTYLLLIDTL  647 (794)
T ss_pred             CCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEe-ecceEEEEEEe
Confidence            446777777777 89999999999999953333444566778899999999999987754 45667787753

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=96.93  E-value=0.067  Score=48.53  Aligned_cols=114  Identities=17%  Similarity=0.094  Sum_probs=71.6

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-EEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      ..++|++++-- .+ .|+.|. .+.|.+|++...+ ....-. .....+.++..  .+++++.|.....+.++.......
T Consensus        87 ~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~  161 (321)
T PF03178_consen   87 VKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYDEENN  161 (321)
T ss_dssp             ESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEETTTE
T ss_pred             ecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEEccCC
Confidence            47899999855 34 443333 4799999998776 433322 12235666655  467999999888888886543211


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      ..                        ..+. -......++++.|.++++.++.+..+|.+.++...
T Consensus       162 ~l------------------------~~va-~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  162 KL------------------------ILVA-RDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             -E------------------------EEEE-EESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             EE------------------------EEEE-ecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            00                        0111 11235568899998777899999999999999765

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=96.89  E-value=0.049  Score=50.96  Aligned_cols=131  Identities=11%  Similarity=0.063  Sum_probs=82.9

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES  271 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  271 (360)
                      +..++.++.+|.+..+|..+|+.+....-  +....+..  .+..++.++.++.+..+|..++.......          
T Consensus       256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~--~~~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~W~~~----------  321 (394)
T PRK11138        256 GGVVYALAYNGNLVALDLRSGQIVWKREY--GSVNDFAV--DGGRIYLVDQNDRVYALDTRGGVELWSQS----------  321 (394)
T ss_pred             CCEEEEEEcCCeEEEEECCCCCEEEeecC--CCccCcEE--ECCEEEEEcCCCeEEEEECCCCcEEEccc----------
Confidence            44677788899999999999987655431  22222222  45677888899999999998885443210          


Q ss_pred             CCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEE-EEEcCCCCEEE
Q psy11015        272 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA-AAGRTGGPIRA  350 (360)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~-~~~~~~g~~la  350 (360)
                                     .+ .+ ....+...  .+.+++.++.||.+...|..+|+.+.........+.+ ..+ .++.+++
T Consensus       322 ---------------~~-~~-~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~-~~~~l~v  381 (394)
T PRK11138        322 ---------------DL-LH-RLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV-ADDKLLI  381 (394)
T ss_pred             ---------------cc-CC-CcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE-ECCEEEE
Confidence                           00 00 01111112  2567888999999999999999988777654333332 222 3566666


Q ss_pred             cccccc
Q psy11015        351 SPLLLA  356 (360)
Q Consensus       351 s~~~~~  356 (360)
                      .+.++.
T Consensus       382 ~t~~G~  387 (394)
T PRK11138        382 QARDGT  387 (394)
T ss_pred             EeCCce
Confidence            666554

>KOG1920|consensus

Probab=96.86  E-value=0.013  Score=59.72  Aligned_cols=117  Identities=12%  Similarity=0.139  Sum_probs=74.0

Q ss_pred             EEEEECCCCCEEEEEe----CC-CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE---eCCCcEEEEEcccCe
Q psy11015        184 WDVAVRPGQPVLGSAS----AD-RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA---SGDKSVHIWQAVINW  255 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs----~D-g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~---s~d~~i~vwd~~~~~  255 (360)
                      ..++|.-||.++++..    .+ +.|+|||.+ |..-..-..-.+-=.+++|-|.|..+++-   +.|+.|.+|..+.- 
T Consensus       199 ~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL-  276 (1265)
T KOG1920|consen  199 TSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGL-  276 (1265)
T ss_pred             ceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCc-
Confidence            4589999999888832    23 799999987 43222222223334589999999988875   34567888864321 


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE---EECCCcEEEEECCCCeE
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT---ASWDRVANLFDVETGTI  326 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t---gs~dg~i~iwd~~~~~~  326 (360)
                                              ..+.....+......|..++|+.++..|++   ......|++|-+.+-..
T Consensus       277 ------------------------~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhW  326 (1265)
T KOG1920|consen  277 ------------------------RHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHW  326 (1265)
T ss_pred             ------------------------cccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeEE
Confidence                                    001111112223334899999999999887   33444599998766543

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.84  E-value=0.0045  Score=38.36  Aligned_cols=34  Identities=9%  Similarity=0.120  Sum_probs=30.0

Q ss_pred             CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015        292 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  326 (360)
Q Consensus       292 ~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~  326 (360)
                      ...|..++|+|..+.||.|+.||.|.+|.+ +++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            456999999999999999999999999998 5554

>KOG3621|consensus

Probab=96.76  E-value=0.0062  Score=58.43  Aligned_cols=107  Identities=10%  Similarity=-0.038  Sum_probs=77.4

Q ss_pred             cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC
Q psy11015        223 GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  302 (360)
Q Consensus       223 ~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp  302 (360)
                      ..|.--+++..+.+++.|+.-|.+.+|.-..+...                           .....+-.+.+..+..++
T Consensus        34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~---------------------------~~~~~~~~~~~~~~~vs~   86 (726)
T KOG3621|consen   34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMR---------------------------KLKNEGATGITCVRSVSS   86 (726)
T ss_pred             ceEEEEEeecCCceEEEecccceEEEEecCchhhh---------------------------cccccCccceEEEEEecc
Confidence            34444456668889999999999999987655211                           122223455677788899


Q ss_pred             CCCEEEEEECCCcEEEEECCCCeE-----EEEE-ecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        303 DGEQVITASWDRVANLFDVETGTI-----LQSL-TEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~-----~~~l-~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      +..++|.|+..|.|.++-+..+.+     +... ..|...|++++|+++|.-+.+|-..+
T Consensus        87 ~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~G  146 (726)
T KOG3621|consen   87 VEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQG  146 (726)
T ss_pred             hhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCc
Confidence            988999999999999998765432     2222 23788999999999999988886543

>KOG2079|consensus

Probab=96.73  E-value=0.0088  Score=60.11  Aligned_cols=63  Identities=22%  Similarity=0.249  Sum_probs=49.0

Q ss_pred             CCEEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        192 QPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      +..++.|+..|.|-..|.... .+...=..-.++|.+++|+.+|..++.|-.+|.|.+||+.++
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~  162 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA  162 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCC
Confidence            447888888899888887543 111111224578999999999999999999999999999876

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=96.71  E-value=0.35  Score=41.94  Aligned_cols=165  Identities=10%  Similarity=0.061  Sum_probs=88.8

Q ss_pred             ceeeeeeeecC-CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC------eEEEEEe-----CCCcCeEEEEEeeCCCE
Q psy11015        169 SCYKIRSFSGH-RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG------KCVLQYS-----GHSGSVNSVRFLPNKDL  236 (360)
Q Consensus       169 ~~~~~~~l~~h-~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~------~~~~~~~-----~h~~~v~~i~~~p~~~~  236 (360)
                      .+..++++.-. -+..-+|++..++.++++.-.++.+.++++...      .....+.     .+...+-.++|+|.++.
T Consensus        52 ~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~  131 (248)
T PF06977_consen   52 DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNR  131 (248)
T ss_dssp             T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTE
T ss_pred             CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCE
Confidence            35566665433 356788888877766666666899999988432      1122222     24456899999998887


Q ss_pred             EEEEeCCCcEEEEEcccC---eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEEC
Q psy11015        237 VLSASGDKSVHIWQAVIN---WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASW  312 (360)
Q Consensus       237 l~s~s~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~  312 (360)
                      |+.+-...-..+|.+...   .....                    ...............+.+++++|... +++....
T Consensus       132 L~v~kE~~P~~l~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~e  191 (248)
T PF06977_consen  132 LFVAKERKPKRLYEVNGFPGGFDLFV--------------------SDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDE  191 (248)
T ss_dssp             EEEEEESSSEEEEEEESTT-SS--EE--------------------EE-HHHH-HT--SS---EEEEETTTTEEEEEETT
T ss_pred             EEEEeCCCChhhEEEccccCccceee--------------------ccccccccccceeccccceEEcCCCCeEEEEECC
Confidence            777777766777766531   00000                    00000111112344578999999654 5566667


Q ss_pred             CCcEEEEECCCCeEEEEEecCC---------CceEEEEEcCCCCEEEcccc
Q psy11015        313 DRVANLFDVETGTILQSLTEPG---------EAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       313 dg~i~iwd~~~~~~~~~l~~h~---------~~v~~~~~~~~g~~las~~~  354 (360)
                      ++.|..+| ..|+.+..+.-..         ..--.++|.++|++.+++.-
T Consensus       192 s~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEp  241 (248)
T PF06977_consen  192 SRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEP  241 (248)
T ss_dssp             TTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETT
T ss_pred             CCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCC
Confidence            78899999 6788776654222         24678999999998777653

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PRK02888 nitrous-oxide reductase; Validated

Probab=96.69  E-value=0.063  Score=52.05  Aligned_cols=161  Identities=11%  Similarity=-0.025  Sum_probs=81.6

Q ss_pred             ECCCCCEEEE-EeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC----CcEEEEEcccCeeEeeeCC
Q psy11015        188 VRPGQPVLGS-ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----KSVHIWQAVINWECLVSNN  262 (360)
Q Consensus       188 ~~~~~~~l~s-gs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d----~~i~vwd~~~~~~~~~~~~  262 (360)
                      +.|+|..+.. .-..+.+.+.|.++.+...++.- .+....++++|+|.++++.+.+    .++..-+......+..+..
T Consensus       200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni  278 (635)
T PRK02888        200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI  278 (635)
T ss_pred             cCCCCCEeecccceeEEEEEEECccceEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch
Confidence            4556654432 33345677778877666666552 3355677888888888777522    2232222221111111111


Q ss_pred             CC------CCCCCCCCCCCCCc--ccc-----ccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECCCCeE--
Q psy11015        263 DN------DSDLDESKEPDESS--ITL-----RTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTI--  326 (360)
Q Consensus       263 ~~------~~~~~~~~~~~~~~--~~~-----~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~~~~~--  326 (360)
                      ..      ..............  ...     ...+..+ .-......+.++|||++++++ ..+.++-|.|+.+.+.  
T Consensus       279 ~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yI-PVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~  357 (635)
T PRK02888        279 ARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYV-PVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLF  357 (635)
T ss_pred             HHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEE-ECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhh
Confidence            00      00000000000000  000     1112222 233457789999999998655 4589999999987552  


Q ss_pred             ----------EEEEecCCCceEEEEEcCCCCEEEc
Q psy11015        327 ----------LQSLTEPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       327 ----------~~~l~~h~~~v~~~~~~~~g~~las  351 (360)
                                +.+..- ...-...+|.++|+..+|
T Consensus       358 ~~~~~~~~~vvaevev-GlGPLHTaFDg~G~ayts  391 (635)
T PRK02888        358 DGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTT  391 (635)
T ss_pred             hccCCccceEEEeecc-CCCcceEEECCCCCEEEe
Confidence                      333333 223356788888874443

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=96.68  E-value=0.31  Score=41.73  Aligned_cols=69  Identities=12%  Similarity=0.019  Sum_probs=49.3

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEE-eCCC---cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQY-SGHS---GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~-~~h~---~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      +..++.++.|+.++.+|..+|+.+... ....   ...........+..++.+..++.+..+|+.+|......
T Consensus        76 ~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~  148 (238)
T PF13360_consen   76 GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKY  148 (238)
T ss_dssp             TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEE
T ss_pred             ccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEe
Confidence            446777778899999999999988884 4221   11223333335788888998999999999999766543

...

>KOG2079|consensus

Probab=96.61  E-value=0.0081  Score=60.38  Aligned_cols=94  Identities=14%  Similarity=0.140  Sum_probs=68.8

Q ss_pred             CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015        233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  312 (360)
Q Consensus       233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~  312 (360)
                      .+-.++.|+..|.+...|...+-                           .+...-..-.++|++++|+.+|..++.|-.
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL---------------------------~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~  150 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNL---------------------------GPLHQNERVQGPVTSVAFNQDGSLLLAGLG  150 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhccc---------------------------chhhcCCccCCcceeeEecCCCceeccccC
Confidence            44467888888888888876430                           111112223579999999999999999999


Q ss_pred             CCcEEEEECCCCeEEEEEecCCCceEEEEE---cCCCCEEEccc
Q psy11015        313 DRVANLFDVETGTILQSLTEPGEAIRAAAG---RTGGPIRASPL  353 (360)
Q Consensus       313 dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~---~~~g~~las~~  353 (360)
                      +|.|.+||+.+++.++.+..|..+.+++-+   ..++..+.++.
T Consensus       151 ~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D  194 (1206)
T KOG2079|consen  151 DGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSD  194 (1206)
T ss_pred             CCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEcc
Confidence            999999999999999999888777776654   33444444443

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.55  E-value=0.01  Score=36.77  Aligned_cols=34  Identities=12%  Similarity=0.083  Sum_probs=29.6

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC  214 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~  214 (360)
                      ...|.+++|+|..++||.|+.||.|.++.+ +++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            346899999999999999999999999998 4443

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.54  E-value=0.31  Score=45.38  Aligned_cols=146  Identities=20%  Similarity=0.145  Sum_probs=97.1

Q ss_pred             CEEEEEECCCCCEEEEEeC---CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeE
Q psy11015        182 GVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWEC  257 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~---Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~  257 (360)
                      .-..++++|++..+..+..   ++++.+.|..++..+.....-..+ ..+++.|+|..++.+. .++++.+.|.......
T Consensus       117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~  195 (381)
T COG3391         117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV  195 (381)
T ss_pred             CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence            4567889999986666555   688999999988887775533334 8999999999666554 7889999996544111


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcEEEEECCCCeEEEE-EecC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTILQS-LTEP  333 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i~iwd~~~~~~~~~-l~~h  333 (360)
                      .                       ....... .-......+.++|+|.++......   +.+...|..++..... ....
T Consensus       196 ~-----------------------~~~~~~~-~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~  251 (381)
T COG3391         196 R-----------------------GSVGSLV-GVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVG  251 (381)
T ss_pred             c-----------------------ccccccc-ccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccc
Confidence            0                       0000011 112234568899999977655433   6899999998876655 2221


Q ss_pred             CCceEEEEEcCCCCEEEcc
Q psy11015        334 GEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las~  352 (360)
                      ......++.+|+|..+..+
T Consensus       252 ~~~~~~v~~~p~g~~~yv~  270 (381)
T COG3391         252 SGAPRGVAVDPAGKAAYVA  270 (381)
T ss_pred             cCCCCceeECCCCCEEEEE
Confidence            1145667889998876654

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.37  E-value=0.26  Score=36.54  Aligned_cols=84  Identities=14%  Similarity=0.154  Sum_probs=55.5

Q ss_pred             eEEEEEee---CC-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE
Q psy11015        225 VNSVRFLP---NK-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW  300 (360)
Q Consensus       225 v~~i~~~p---~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~  300 (360)
                      |+++++..   +| +.|++||.|..|++|+-..                              .+..+.. ...|++++-
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e------------------------------~~~Ei~e-~~~v~~L~~   50 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE------------------------------IVAEITE-TDKVTSLCS   50 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc------------------------------EEEEEec-ccceEEEEE
Confidence            56777765   22 5899999999999997432                              3455554 346777766


Q ss_pred             cCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEc
Q psy11015        301 LSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR  343 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~  343 (360)
                      ... ..++-|-.+|+|-+|+-.  ..+-..+. ...++++++.
T Consensus        51 ~~~-~~F~Y~l~NGTVGvY~~~--~RlWRiKS-K~~~~~~~~~   89 (111)
T PF14783_consen   51 LGG-GRFAYALANGTVGVYDRS--QRLWRIKS-KNQVTSMAFY   89 (111)
T ss_pred             cCC-CEEEEEecCCEEEEEeCc--ceeeeecc-CCCeEEEEEE
Confidence            544 678889999999999853  33334443 3346666553

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=96.28  E-value=0.17  Score=47.10  Aligned_cols=183  Identities=8%  Similarity=0.085  Sum_probs=96.2

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--C------CCcCeEEEEEee-----CC-
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--G------HSGSVNSVRFLP-----NK-  234 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~------h~~~v~~i~~~p-----~~-  234 (360)
                      ...+..-+....++|++++.+.-| +++.|..+|.+.|.|++....+..-.  .      ....|+++.|..     |+ 
T Consensus        75 gf~P~~l~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~y  153 (395)
T PF08596_consen   75 GFLPLTLLDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGY  153 (395)
T ss_dssp             EEEEEEEE---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSS
T ss_pred             ccCchhheeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcc
Confidence            345666677779999999998666 99999999999999998776655421  1      233588898874     22 


Q ss_pred             --CEEEEEeCCCcEEEEEccc---CeeEee---eC-CCCCCCCCC----CCCCCCC--c------------------ccc
Q psy11015        235 --DLVLSASGDKSVHIWQAVI---NWECLV---SN-NDNDSDLDE----SKEPDES--S------------------ITL  281 (360)
Q Consensus       235 --~~l~s~s~d~~i~vwd~~~---~~~~~~---~~-~~~~~~~~~----~~~~~~~--~------------------~~~  281 (360)
                        -.+++|...|.+.+|.+.-   +.-...   .. .........    .......  .                  ...
T Consensus       154 SSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvS  233 (395)
T PF08596_consen  154 SSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVS  233 (395)
T ss_dssp             EEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-
T ss_pred             cceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEc
Confidence              3688899999999997752   111111   00 000000000    0000000  0                  000


Q ss_pred             cc-----------ceeEeeCCCCcEEEEEEc-----CCCCEEEEEECCCcEEEEECCCCeEEEEEecCC----CceEEEE
Q psy11015        282 RT-----------PVKELLGHSNVVIAADWL-----SDGEQVITASWDRVANLFDVETGTILQSLTEPG----EAIRAAA  341 (360)
Q Consensus       282 ~~-----------~~~~~~~h~~~v~~i~~s-----p~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~----~~v~~~~  341 (360)
                      .+           ..+......-...++.+-     ..+..|++-..+|.+++|.+..-+.+..+..+.    ..+....
T Consensus       234 e~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ss  313 (395)
T PF08596_consen  234 ESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSS  313 (395)
T ss_dssp             SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-E
T ss_pred             ccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccE
Confidence            00           111111111123334442     245677888899999999999998888776532    2344566


Q ss_pred             EcCCCCEEEcc
Q psy11015        342 GRTGGPIRASP  352 (360)
Q Consensus       342 ~~~~g~~las~  352 (360)
                      ++++|.++.-.
T Consensus       314 is~~Gdi~~~~  324 (395)
T PF08596_consen  314 ISRNGDIFYWT  324 (395)
T ss_dssp             E-TTS-EEEE-
T ss_pred             ECCCCCEEEEe
Confidence            78888877543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.15  E-value=0.83  Score=42.31  Aligned_cols=149  Identities=8%  Similarity=0.017  Sum_probs=79.3

Q ss_pred             CCEEEEEECCCCCEEEEEe-----------CCC-cEEEEECCC--Ce--EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        181 DGVWDVAVRPGQPVLGSAS-----------ADR-TVRLWSTQT--GK--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs-----------~Dg-~v~iwd~~~--~~--~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      .....|+|.++|+++++-.           ..+ .|.+++-..  |+  ....+-..-.....+++.++| ++++ +...
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~-~~~~   91 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVA-TPPD   91 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEe-CCCe
Confidence            3567889999998766643           223 676665432  32  233443334456889999888 5554 4443


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccc-ceeEeeC----CCCcEEEEEEcCCCCEEEEEEC-------
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRT-PVKELLG----HSNVVIAADWLSDGEQVITASW-------  312 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----h~~~v~~i~~sp~g~~l~tgs~-------  312 (360)
                      ..++.|........                     ...+ .+..+..    +......++|.|+|.+.++-+.       
T Consensus        92 i~~~~d~~gdg~ad---------------------~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~  150 (367)
T TIGR02604        92 ILFLRDKDGDDKAD---------------------GEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVT  150 (367)
T ss_pred             EEEEeCCCCCCCCC---------------------CccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceec
Confidence            22333432110000                     0000 1111211    2345778999999986554431       


Q ss_pred             ------------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        313 ------------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       313 ------------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                                  .|.|.-++..++.. ..+...-.....++|+|+|.++++-.
T Consensus       151 ~~~~~~~~~~~~~g~i~r~~pdg~~~-e~~a~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       151 RPGTSDESRQGLGGGLFRYNPDGGKL-RVVAHGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             cCCCccCcccccCceEEEEecCCCeE-EEEecCcCCCccceECCCCCEEEEcc
Confidence                        14455556554443 33322223357899999999887644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.14  E-value=0.74  Score=40.19  Aligned_cols=146  Identities=16%  Similarity=0.086  Sum_probs=85.3

Q ss_pred             CEEEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE-cccCeeEee
Q psy11015        182 GVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ-AVINWECLV  259 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs-~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd-~~~~~~~~~  259 (360)
                      .+.+.++++++..++... .++.-.+|-...+....... ....+....|++++...+....+...+++. ...+.....
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~  103 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPV  103 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeE
Confidence            688899999998665554 23333333333333222221 223678889999987777767677777774 222211100


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE---CCCcEEEEECC---CC------eEE
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS---WDRVANLFDVE---TG------TIL  327 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs---~dg~i~iwd~~---~~------~~~  327 (360)
                                              .+. ...-...|.++.+||||..++...   .++.|.+--+.   .+      ..+
T Consensus       104 ------------------------~v~-~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~  158 (253)
T PF10647_consen  104 ------------------------EVD-WPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPR  158 (253)
T ss_pred             ------------------------Eec-ccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccce
Confidence                                    011 111112899999999999886554   34666666443   23      111


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      .........+++++|.+++.+++.+.
T Consensus       159 ~~~~~~~~~v~~v~W~~~~~L~V~~~  184 (253)
T PF10647_consen  159 RVAPPLLSDVTDVAWSDDSTLVVLGR  184 (253)
T ss_pred             EecccccCcceeeeecCCCEEEEEeC
Confidence            12223356889999999998777544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2444|consensus

Probab=96.10  E-value=0.022  Score=47.54  Aligned_cols=102  Identities=12%  Similarity=0.075  Sum_probs=66.4

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEE-EECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-cCeEEE
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDV-AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVNSV  228 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l-~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-~~v~~i  228 (360)
                      .+.|.....+..|.|... +.....+..-...|.++ ..-.++.+.++++.||.||.|++..++.+...-.|. .++...
T Consensus        73 ~~vG~~dg~v~~~n~n~~-g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~  151 (238)
T KOG2444|consen   73 LMVGTSDGAVYVFNWNLE-GAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEEL  151 (238)
T ss_pred             EEeecccceEEEecCCcc-chHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCccee
Confidence            345667777778888732 22222222222333333 333455689999999999999999988887777676 455555


Q ss_pred             EEeeCCCEEEEE--eCCCcEEEEEccc
Q psy11015        229 RFLPNKDLVLSA--SGDKSVHIWQAVI  253 (360)
Q Consensus       229 ~~~p~~~~l~s~--s~d~~i~vwd~~~  253 (360)
                      ..+..+.+++.+  |.|..++.|++..
T Consensus       152 ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  152 IVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             EEecCCceEEeeccccchhhhhcchhh
Confidence            555566677776  7778888887654

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.05  E-value=0.32  Score=47.71  Aligned_cols=127  Identities=14%  Similarity=0.230  Sum_probs=75.0

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEe--eCCCEEEEEeCCCcEEEEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFL--PNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~--p~~~~l~s~s~d~~i~vwd  250 (360)
                      .++........-+.-+.-+...+.-+...++.|||...+.....-. ...+.|.++.|.  |+|+.+++.|..+.|.++-
T Consensus        23 ~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~  102 (631)
T PF12234_consen   23 STFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT  102 (631)
T ss_pred             EEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence            3343333344444444444443334444579999999886332221 347889999996  6889999999999999985


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe--eCCC-CcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL--LGHS-NVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~-~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      -..-....                   ....+.++..+  ..|+ .+|....|.++|..++.++  ..+.|+|-
T Consensus       103 Q~R~dy~~-------------------~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk  155 (631)
T PF12234_consen  103 QLRYDYTN-------------------KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK  155 (631)
T ss_pred             ccchhhhc-------------------CCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence            32110000                   00112233322  3444 5788999999986665443  56778763

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.04  E-value=0.35  Score=42.02  Aligned_cols=142  Identities=18%  Similarity=0.246  Sum_probs=92.9

Q ss_pred             EEEECCCCC-EEEEEeCCCc-EEEEECCCCeEEEEEeCCCc--CeEEEEEeeCCCEEEEEeCC-----CcEEEEEcccCe
Q psy11015        185 DVAVRPGQP-VLGSASADRT-VRLWSTQTGKCVLQYSGHSG--SVNSVRFLPNKDLVLSASGD-----KSVHIWQAVINW  255 (360)
Q Consensus       185 ~l~~~~~~~-~l~sgs~Dg~-v~iwd~~~~~~~~~~~~h~~--~v~~i~~~p~~~~l~s~s~d-----~~i~vwd~~~~~  255 (360)
                      .++|+|..+ .++-+-.-|+ ..++|....+...++....+  .--.-.|||||.+|+..-.|     |.|=|||.+.+.
T Consensus        72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~f  151 (366)
T COG3490          72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGF  151 (366)
T ss_pred             CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccccc
Confidence            577888654 4555655555 56788887765544432111  11223699999999876544     568899987541


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC------------------CCcEE
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW------------------DRVAN  317 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~------------------dg~i~  317 (360)
                                                 ..+..+..|.-....+.|.+||+.++.+..                  .-.+.
T Consensus       152 ---------------------------qrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlv  204 (366)
T COG3490         152 ---------------------------QRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLV  204 (366)
T ss_pred             ---------------------------ceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEE
Confidence                                       235566677777778999999999987642                  11355


Q ss_pred             EEECCCCeEEEE--Ee--cCCCceEEEEEcCCCCEEEccc
Q psy11015        318 LFDVETGTILQS--LT--EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       318 iwd~~~~~~~~~--l~--~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +.|..+|+.+..  +.  .+.-+|..++..++|.+.+..-
T Consensus       205 lld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQ  244 (366)
T COG3490         205 LLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQ  244 (366)
T ss_pred             EEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEE
Confidence            566667766543  33  3456789999999998877543

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.02  E-value=0.6  Score=43.49  Aligned_cols=139  Identities=17%  Similarity=0.137  Sum_probs=92.8

Q ss_pred             EEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC---CCcEEEEEcccCeeEe
Q psy11015        183 VWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG---DKSVHIWQAVINWECL  258 (360)
Q Consensus       183 V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~---d~~i~vwd~~~~~~~~  258 (360)
                      -..+++++.+. ..++...++.|.+.|..+.+......-- .....++++|++..+..+..   ++++-+.|..++... 
T Consensus        76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG-~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~-  153 (381)
T COG3391          76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVG-LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT-  153 (381)
T ss_pred             ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeec-cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE-
Confidence            35678888877 5555556689999998877766665522 26678999999977766554   678888887766322 


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEE-E----Eec
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQ-S----LTE  332 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~-~----l~~  332 (360)
                                                 .....-..+ ..+++.|+|..++... .++.+.+.|..+..... .    ...
T Consensus       154 ---------------------------~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~  205 (381)
T COG3391         154 ---------------------------ATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGV  205 (381)
T ss_pred             ---------------------------EEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceecccccccccc
Confidence                                       222222223 7899999999776554 78999999976554442 1    221


Q ss_pred             CCCceEEEEEcCCCCEEEcc
Q psy11015        333 PGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las~  352 (360)
                       ...-..++++|+|..+...
T Consensus       206 -~~~P~~i~v~~~g~~~yV~  224 (381)
T COG3391         206 -GTGPAGIAVDPDGNRVYVA  224 (381)
T ss_pred             -CCCCceEEECCCCCEEEEE
Confidence             2234667889998855443

>PRK13616 lipoprotein LpqB; Provisional

Probab=95.98  E-value=0.17  Score=49.78  Aligned_cols=142  Identities=11%  Similarity=0.070  Sum_probs=77.4

Q ss_pred             EEEEEECCCCCEEEEEeCC------------CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE--
Q psy11015        183 VWDVAVRPGQPVLGSASAD------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI--  248 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~D------------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v--  248 (360)
                      .+.-.|+|+|..+.+.+..            +.+.+.+++.+....   ...+.|..+.|+|||..++... ++.|.+  
T Consensus       399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~  474 (591)
T PRK13616        399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAV  474 (591)
T ss_pred             CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEE
Confidence            6677899998877776532            223333444333222   2356799999999999887655 466655  


Q ss_pred             -EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC-CCeE
Q psy11015        249 -WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE-TGTI  326 (360)
Q Consensus       249 -wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~-~~~~  326 (360)
                       -....|..                       ....+.....+-...+.++.|..++..+ ++..++...+|.+. .|..
T Consensus       475 Vvr~~~G~~-----------------------~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~  530 (591)
T PRK13616        475 VEQTEDGQY-----------------------ALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSN  530 (591)
T ss_pred             EEeCCCCce-----------------------eecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCcc
Confidence             22222210                       0111211222333446789999888754 55555555556543 1322


Q ss_pred             EEEEec--CCCceEEEEEcCCCCEEEccc
Q psy11015        327 LQSLTE--PGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       327 ~~~l~~--h~~~v~~~~~~~~g~~las~~  353 (360)
                      ...+..  ...++.+++-+++ .++++..
T Consensus       531 ~~~~~~~n~~~~v~~vaa~~~-~iyv~~~  558 (591)
T PRK13616        531 SDALPSRNLSAPVVAVAASPS-TVYVTDA  558 (591)
T ss_pred             ccccCCCCccCceEEEecCCc-eEEEEcC
Confidence            222222  2567788887764 4444433

>KOG2444|consensus

Probab=95.93  E-value=0.027  Score=47.02  Aligned_cols=103  Identities=16%  Similarity=0.082  Sum_probs=61.2

Q ss_pred             CCEEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeE-EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCC
Q psy11015        192 QPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVN-SVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLD  269 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~-~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~  269 (360)
                      +..++.|+.+|.|.+|+.... .....+..-...|. -|.--.++.+.++++.|+.|+.|++.-+               
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~---------------  134 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPN---------------  134 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccC---------------
Confidence            447899999999999987621 11111111112222 2222234568899999999999987644               


Q ss_pred             CCCCCCCCccccccceeEeeCCC-CcEEEEEEcCCCCEEEEE--ECCCcEEEEECC
Q psy11015        270 ESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITA--SWDRVANLFDVE  322 (360)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~sp~g~~l~tg--s~dg~i~iwd~~  322 (360)
                                   +.+.....|. .++.....+..++.++.+  |.|..++.|++.
T Consensus       135 -------------k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve  177 (238)
T KOG2444|consen  135 -------------KVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE  177 (238)
T ss_pred             -------------ceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence                         2233333454 344455555556666666  677777777765

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.90  E-value=0.31  Score=47.76  Aligned_cols=104  Identities=11%  Similarity=0.189  Sum_probs=68.7

Q ss_pred             cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc-
Q psy11015        223 GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL-  301 (360)
Q Consensus       223 ~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s-  301 (360)
                      ....-+.-+.-+...++.+....+.|||.+.+....                          ...+ ...+.|..+.|. 
T Consensus        30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~--------------------------~~~f-~~~~~I~dLDWts   82 (631)
T PF12234_consen   30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEY--------------------------EESF-SEDDPIRDLDWTS   82 (631)
T ss_pred             CCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEE--------------------------eeee-cCCCceeeceeee
Confidence            344445555545544444455579999998774221                          1222 456789999995 


Q ss_pred             -CCCCEEEEEECCCcEEEEECC---------CCeEEEEE--ecCC-CceEEEEEcCCCCEEEccc
Q psy11015        302 -SDGEQVITASWDRVANLFDVE---------TGTILQSL--TEPG-EAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       302 -p~g~~l~tgs~dg~i~iwd~~---------~~~~~~~l--~~h~-~~v~~~~~~~~g~~las~~  353 (360)
                       |+|+.+++.|..+.|.+|.-.         +...+..+  ..|+ .+|.+..|.++|.+++++.
T Consensus        83 t~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG  147 (631)
T PF12234_consen   83 TPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG  147 (631)
T ss_pred             cCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC
Confidence             789999999999999998531         22334433  2333 6899999999999887654

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG1832|consensus

Probab=95.81  E-value=0.018  Score=56.98  Aligned_cols=71  Identities=10%  Similarity=0.193  Sum_probs=63.5

Q ss_pred             cceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        283 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       283 ~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ++..++..|....++++|+-+.++|+.|+..|.|++|++.+|........|+.+|+.+.-+-+|....|++
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltss 1162 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSS 1162 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeec
Confidence            45677788899999999999999999999999999999999999999999999999999998987666554

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=95.68  E-value=0.9  Score=39.40  Aligned_cols=154  Identities=14%  Similarity=0.140  Sum_probs=87.4

Q ss_pred             eeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCC-CcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        174 RSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h-~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      +.+.+-...+..++|+|+.+ +++.....+.|...+. .|+.+..+.-. .+..-.|++..++.++++.-.++.+.++++
T Consensus        15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~   93 (248)
T PF06977_consen   15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI   93 (248)
T ss_dssp             EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred             eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence            45666667799999999755 6666777888888886 47777776532 356889999877777776667899999988


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-----eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC---
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-----LGHSNVVIAADWLSDGEQVITASWDRVANLFDVET---  323 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~---  323 (360)
                      ........                     . .....+     ..+...+..++|.|.++.|+.+-...-..+|.+..   
T Consensus        94 ~~~~~~~~---------------------~-~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~  151 (248)
T PF06977_consen   94 DDDTTSLD---------------------R-ADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPG  151 (248)
T ss_dssp             ----TT-----------------------E-EEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-
T ss_pred             eccccccc---------------------h-hhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccC
Confidence            43311000                     0 001111     13456799999999988888887777777776653   


Q ss_pred             CeEEEEEe--------cCCCceEEEEEcCC-CCEEE
Q psy11015        324 GTILQSLT--------EPGEAIRAAAGRTG-GPIRA  350 (360)
Q Consensus       324 ~~~~~~l~--------~h~~~v~~~~~~~~-g~~la  350 (360)
                      ...+....        ..-..+.+++++|. |.+++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lli  187 (248)
T PF06977_consen  152 GFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLI  187 (248)
T ss_dssp             SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEE
T ss_pred             ccceeeccccccccccceeccccceEEcCCCCeEEE
Confidence            22222111        12335678888885 44444

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.68  E-value=0.56  Score=41.89  Aligned_cols=153  Identities=9%  Similarity=0.039  Sum_probs=77.9

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      +-.+.+..+..+++|.+++.++.-....-||.-...-...-......|.++.|.|++.+.+. ...|.|+.=+.......
T Consensus       142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~-~~Gg~~~~s~~~~~~~~  220 (302)
T PF14870_consen  142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWML-ARGGQIQFSDDPDDGET  220 (302)
T ss_dssp             S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEE-ETTTEEEEEE-TTEEEE
T ss_pred             CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEE-eCCcEEEEccCCCCccc
Confidence            44577888889999988888877666777885432111112224578999999999876664 48888877762222111


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe---cCC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT---EPG  334 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~---~h~  334 (360)
                      .                       ..+........-.+..++|.+++...++|+ .|.+ +.....|+.=+.-+   .-.
T Consensus       221 w-----------------------~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~  275 (302)
T PF14870_consen  221 W-----------------------SEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTL-LVSTDGGKTWQKDRVGENVP  275 (302)
T ss_dssp             E--------------------------B-TTSS--S-EEEEEESSSS-EEEEES-TT-E-EEESSTTSS-EE-GGGTTSS
T ss_pred             c-----------------------ccccCCcccCceeeEEEEecCCCCEEEEeC-CccE-EEeCCCCccceECccccCCC
Confidence            1                       111111112233588999998877777655 4554 44445554322222   234


Q ss_pred             CceEEEEEcCCCCEEEcccccc
Q psy11015        335 EAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       335 ~~v~~~~~~~~g~~las~~~~~  356 (360)
                      ..++.+.|.+..+-++-+.++.
T Consensus       276 ~n~~~i~f~~~~~gf~lG~~G~  297 (302)
T PF14870_consen  276 SNLYRIVFVNPDKGFVLGQDGV  297 (302)
T ss_dssp             S---EEEEEETTEEEEE-STTE
T ss_pred             CceEEEEEcCCCceEEECCCcE
Confidence            5688888877777777666554

>KOG1916|consensus

Probab=95.54  E-value=0.0074  Score=59.57  Aligned_cols=139  Identities=14%  Similarity=0.088  Sum_probs=81.6

Q ss_pred             eecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECC--CCeE-----EEEEeCCCcCeEEEEEee---CCCEEEEEeCCC
Q psy11015        176 FSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQ--TGKC-----VLQYSGHSGSVNSVRFLP---NKDLVLSASGDK  244 (360)
Q Consensus       176 l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~--~~~~-----~~~~~~h~~~v~~i~~~p---~~~~l~s~s~d~  244 (360)
                      ++|..|.|-.+.|-. +.+.+.  -.-|...||+++  .|+.     ++........+.-|.|+|   ..-++..+-.++
T Consensus       128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~  205 (1283)
T KOG1916|consen  128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGG  205 (1283)
T ss_pred             HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCC
Confidence            456667777777643 222222  223678899986  3432     222333444556667766   455667777788


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEE-----------EEcCCCCEEEEEECC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA-----------DWLSDGEQVITASWD  313 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i-----------~~sp~g~~l~tgs~d  313 (360)
                      ++++....+..                             ...+.+|+.++..+           ..+|||..+++++.|
T Consensus       206 ~i~lL~~~ra~-----------------------------~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~d  256 (1283)
T KOG1916|consen  206 EIRLLNINRAL-----------------------------RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISD  256 (1283)
T ss_pred             ceeEeeechHH-----------------------------HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecC
Confidence            88877655431                             12233344433222           268999999999999


Q ss_pred             CcEEEEECC-----CCeEEEEEecCC-CceEEEEEcCC
Q psy11015        314 RVANLFDVE-----TGTILQSLTEPG-EAIRAAAGRTG  345 (360)
Q Consensus       314 g~i~iwd~~-----~~~~~~~l~~h~-~~v~~~~~~~~  345 (360)
                      |.++.|.+.     ...|++..+.|. ++-.|.-|+.+
T Consensus       257 G~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~  294 (1283)
T KOG1916|consen  257 GSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQ  294 (1283)
T ss_pred             CccceeeeeeeccccHhhhhccCCCCCCCceeeeeccc
Confidence            998888653     334566677776 34333334443

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=95.46  E-value=0.44  Score=45.56  Aligned_cols=151  Identities=14%  Similarity=0.145  Sum_probs=85.8

Q ss_pred             CCEEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC----CCEEEEEeCCCcEEEEEcccC
Q psy11015        181 DGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN----KDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs--~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~----~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      .+|..++|......+.|.=  ..|.+++=|.   ..+..|.    .|..+.|.|-    -..+++.-..+.|.||.+.-.
T Consensus        20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGds---~viGqFE----hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s   92 (671)
T PF15390_consen   20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS---KVIGQFE----HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPS   92 (671)
T ss_pred             ccccceEecCCCEEEEEeeeeeCCccccCCc---cEeeccc----eeeeeeecCcccCCCCceEEEeccceEEEEEeccC
Confidence            4788899976555565543  2344443332   2344443    4889999985    335666778889999987522


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEEEec
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLTE  332 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~l~~  332 (360)
                      .....                 ...  ......+. ...--..++.|+|....|+.-.....-.+++++.. ..++.=..
T Consensus        93 ~~e~~-----------------K~l--~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~  153 (671)
T PF15390_consen   93 TTERN-----------------KLL--MSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK  153 (671)
T ss_pred             ccccc-----------------cce--eeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc
Confidence            00000                 000  00011111 01112246789999988876655554456666532 23322224


Q ss_pred             CCCceEEEEEcCCCCEEEcccccch
Q psy11015        333 PGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      ..+-|.|.+|.+||+.++-|..+++
T Consensus       154 ~~G~IhCACWT~DG~RLVVAvGSsL  178 (671)
T PF15390_consen  154 TSGLIHCACWTKDGQRLVVAVGSSL  178 (671)
T ss_pred             CCceEEEEEecCcCCEEEEEeCCeE
Confidence            5678999999999998876655443

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=95.46  E-value=0.84  Score=40.17  Aligned_cols=141  Identities=11%  Similarity=0.047  Sum_probs=77.9

Q ss_pred             CCCCEEEEEeCCCcEEEEECC-CCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCC
Q psy11015        190 PGQPVLGSASADRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDL  268 (360)
Q Consensus       190 ~~~~~l~sgs~Dg~v~iwd~~-~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~  268 (360)
                      ..++.|+.|..+| +.+++.. .........  ...|..+...|+-+.+++-+ |+.+.++++..-........      
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~------   74 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAP------   74 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccc------
Confidence            3467899999998 8999983 333333333  33499999999877776654 59999999875422211000      


Q ss_pred             CCCCCCCCCccccccceeEeeCCCCcEEEEE---EcCCCCEEEEEECCCcEEEEECCCC-----eEEEEEecCCCceEEE
Q psy11015        269 DESKEPDESSITLRTPVKELLGHSNVVIAAD---WLSDGEQVITASWDRVANLFDVETG-----TILQSLTEPGEAIRAA  340 (360)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~---~sp~g~~l~tgs~dg~i~iwd~~~~-----~~~~~l~~h~~~v~~~  340 (360)
                              ..................+...+   -...+.+++.+ ..+.|.+|.....     ...+++.- ...+.++
T Consensus        75 --------~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i  144 (275)
T PF00780_consen   75 --------LAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA-VKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSI  144 (275)
T ss_pred             --------ccccccccccccccccCCeeEEeeccccccceEEEEE-ECCEEEEEEEECCcccccceeEEEEc-CCCcEEE
Confidence                    00000000000111223344443   12233344444 4568888877542     45566654 4678899


Q ss_pred             EEcCCCCEEE
Q psy11015        341 AGRTGGPIRA  350 (360)
Q Consensus       341 ~~~~~g~~la  350 (360)
                      +|.++.-.++
T Consensus       145 ~~~~~~i~v~  154 (275)
T PF00780_consen  145 AFLGNKICVG  154 (275)
T ss_pred             EEeCCEEEEE
Confidence            9985444444

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.41  E-value=0.052  Score=50.00  Aligned_cols=60  Identities=25%  Similarity=0.211  Sum_probs=41.5

Q ss_pred             CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCC------------------CceEEEEEcCCCCEEEccc
Q psy11015        292 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG------------------EAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       292 ~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~------------------~~v~~~~~~~~g~~las~~  353 (360)
                      ...+....|+|+|+.++-.. ++.|.+++..++...+ +...+                  +.-.++.|+|+|..||...
T Consensus        42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~-lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~  119 (353)
T PF00930_consen   42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQ-LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLR  119 (353)
T ss_dssp             ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEE-SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEE
T ss_pred             ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEE-eccccceeEEcCccceeccccccccccceEECCCCCEEEEEE
Confidence            45678899999999998876 5789999988775432 22111                  1225688999999988655

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG4649|consensus

Probab=95.37  E-value=0.4  Score=41.12  Aligned_cols=68  Identities=7%  Similarity=-0.054  Sum_probs=53.8

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      |++++.|+..|.+++-++.+|.....+.....-=......+++.++..|+.|+++...|.++......
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyk  130 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYK  130 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEe
Confidence            66899999999999999999987777764332222344566899999999999999999988766554

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=95.35  E-value=0.23  Score=46.97  Aligned_cols=127  Identities=13%  Similarity=0.109  Sum_probs=65.1

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      .-...+|.+.+ .+|+-...++|.|+.--.......++. ...+..|-.   |.+|+..+.+ .|.+||+.++.      
T Consensus        70 ~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k~i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~------  137 (443)
T PF04053_consen   70 SGLSFVWSSRN-RYAVLESSSTIKIYKNFKNEVVKSIKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWETGK------  137 (443)
T ss_dssp             E-SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--------
T ss_pred             ceeEEEEecCc-cEEEEECCCeEEEEEcCccccceEEcC-CcccceEEc---CcEEEEECCC-CEEEEEhhHcc------
Confidence            34566788844 577777788999963222222223331 123444433   7777766555 79999998763      


Q ss_pred             CCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-----------eEEEEE
Q psy11015        262 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-----------TILQSL  330 (360)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-----------~~~~~l  330 (360)
                                            .+..+..  .+|..+.|+++|.+++..+.+ .+.|++....           ..+..+
T Consensus       138 ----------------------~i~~i~v--~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~  192 (443)
T PF04053_consen  138 ----------------------LIRRIDV--SAVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELI  192 (443)
T ss_dssp             ----------------------EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEE
T ss_pred             ----------------------eeeEEec--CCCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEE
Confidence                                  3344432  248999999999999988854 6777765422           023333


Q ss_pred             ecCCCceEEEEEcCC
Q psy11015        331 TEPGEAIRAAAGRTG  345 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~  345 (360)
                      ..-...|.+.+|..+
T Consensus       193 ~E~~~~IkSg~W~~d  207 (443)
T PF04053_consen  193 HEISERIKSGCWVED  207 (443)
T ss_dssp             EEE-S--SEEEEETT
T ss_pred             EEecceeEEEEEEcC
Confidence            322457888888766

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG3630|consensus

Probab=95.35  E-value=0.1  Score=53.27  Aligned_cols=141  Identities=11%  Similarity=-0.022  Sum_probs=89.9

Q ss_pred             CEEEEEECCCCCE--EEEEeCCCcEEEEECCCCe--------EEE---EEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEE
Q psy11015        182 GVWDVAVRPGQPV--LGSASADRTVRLWSTQTGK--------CVL---QYSGHSGSVNSVRFLPNK-DLVLSASGDKSVH  247 (360)
Q Consensus       182 ~V~~l~~~~~~~~--l~sgs~Dg~v~iwd~~~~~--------~~~---~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~  247 (360)
                      +|..+...+|+..  ++..+.+-.|..||+++-.        +++   +.......+.++.|+|.- ...+.+..|+.|+
T Consensus       102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~  181 (1405)
T KOG3630|consen  102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR  181 (1405)
T ss_pred             cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence            4555666666553  3444455578899987431        111   111123456788888853 3467778889888


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      |..+.....                           .+.. ......+++++|+|.|.+++.|-..|++.-|-. +++..
T Consensus       182 V~~~~~~~~---------------------------~v~s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik  232 (1405)
T KOG3630|consen  182 VKSTKQLAQ---------------------------NVTS-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIK  232 (1405)
T ss_pred             hhhhhhhhh---------------------------hhcc-cCcccceeeEEeccccceeeEecCCCeEEEeec-cccee
Confidence            886542210                           1111 124557899999999999999999999999974 35444


Q ss_pred             EEEecC----CCceEEEEEcCCCCEEEc
Q psy11015        328 QSLTEP----GEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       328 ~~l~~h----~~~v~~~~~~~~g~~las  351 (360)
                      ..+.+.    ...|.++.|-....+++.
T Consensus       233 ~~ip~Pp~~e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  233 SEIPEPPVEENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             ecccCCCcCCCcceeEEEEecceeEEEE
Confidence            444322    368999999877777664

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.31  E-value=0.36  Score=41.96  Aligned_cols=56  Identities=18%  Similarity=0.349  Sum_probs=45.8

Q ss_pred             EECCCCCEEEEEeCC-----CcEEEEECCCC-eEEEEEeCCCcCeEEEEEeeCCCEEEEEeC
Q psy11015        187 AVRPGQPVLGSASAD-----RTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLPNKDLVLSASG  242 (360)
Q Consensus       187 ~~~~~~~~l~sgs~D-----g~v~iwd~~~~-~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~  242 (360)
                      .|+|||.+|+..-.|     |.|-|||.+.+ ..+..|.+|.-....+.|.+||+.++.+..
T Consensus       120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanG  181 (366)
T COG3490         120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANG  181 (366)
T ss_pred             ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCC
Confidence            489999887766444     78999999865 677888888888899999999998887654

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=95.26  E-value=0.59  Score=43.58  Aligned_cols=120  Identities=13%  Similarity=0.044  Sum_probs=74.0

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-------------------------------------------EEEEE
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-------------------------------------------CVLQY  218 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-------------------------------------------~~~~~  218 (360)
                      .|..++|.+....|+.|-..|.|.||.....+                                           +...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            57888899887889999999999888543110                                           11223


Q ss_pred             eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEE
Q psy11015        219 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA  298 (360)
Q Consensus       219 ~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i  298 (360)
                      +...++|++++.+.-| +++.|..+|.+.|.|++...-.......                    ....-......|+++
T Consensus        83 ~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~--------------------~~~~~~~~~~~vt~i  141 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIR--------------------ESFLSKSSSSYVTSI  141 (395)
T ss_dssp             ---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGG--------------------G--T-SS----EEEE
T ss_pred             eccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeecccc--------------------ccccccccccCeeEE
Confidence            3456899999998545 8999999999999999766444321000                    000011123467778


Q ss_pred             EEcC-----CC---CEEEEEECCCcEEEEECC
Q psy11015        299 DWLS-----DG---EQVITASWDRVANLFDVE  322 (360)
Q Consensus       299 ~~sp-----~g---~~l~tgs~dg~i~iwd~~  322 (360)
                      .|..     |+   -.+++|...|.+.+|.+.
T Consensus       142 eF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIl  173 (395)
T PF08596_consen  142 EFSVMTLGGDGYSSICLLVGTNSGNVLTFKIL  173 (395)
T ss_dssp             EEEEEE-TTSSSEEEEEEEEETTSEEEEEEEE
T ss_pred             EEEEEecCCCcccceEEEEEeCCCCEEEEEEe
Confidence            8762     33   467889999999999764

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=95.19  E-value=2.8  Score=39.42  Aligned_cols=49  Identities=14%  Similarity=0.333  Sum_probs=36.4

Q ss_pred             cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q psy11015        203 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       203 ~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~  253 (360)
                      .|.||+.. |+.+..+.=-.+.+.++.|..+. .|+....||+++++|+..
T Consensus        62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G  110 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLFG  110 (410)
T ss_pred             EEEEECCC-CCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCCC
Confidence            48899865 66666554333889999998755 455677999999999863

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=95.11  E-value=0.59  Score=43.70  Aligned_cols=108  Identities=13%  Similarity=0.045  Sum_probs=69.5

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc----------Ce-EEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSG----------SV-NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~----------~v-~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      +..++.++.+|.+.-+|..+|+.+....-...          .+ ..+..  .+..++.++.++.+.-+|..+|......
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~  146 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQT  146 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence            55788888899999999999988776642210          00 01122  3556777889999999999988655432


Q ss_pred             CCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      ....                   .     ....++    .  .+..++.++.+|.+.-+|..+|+.+-...
T Consensus       147 ~~~~-------------------~-----~~ssP~----v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~  187 (394)
T PRK11138        147 KVAG-------------------E-----ALSRPV----V--SDGLVLVHTSNGMLQALNESDGAVKWTVN  187 (394)
T ss_pred             cCCC-------------------c-----eecCCE----E--ECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence            1100                   0     011111    1  24466677788999999999998876654

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=95.03  E-value=2.3  Score=38.48  Aligned_cols=122  Identities=8%  Similarity=-0.002  Sum_probs=71.3

Q ss_pred             CcEEEEECCCC-----e--EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCC
Q psy11015        202 RTVRLWSTQTG-----K--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEP  274 (360)
Q Consensus       202 g~v~iwd~~~~-----~--~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~  274 (360)
                      |.|.++++...     +  .+... ...++|++++-. .+. ++.+. ++.|.+|++......                 
T Consensus        62 Gri~v~~i~~~~~~~~~l~~i~~~-~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l-----------------  120 (321)
T PF03178_consen   62 GRILVFEISESPENNFKLKLIHST-EVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTL-----------------  120 (321)
T ss_dssp             EEEEEEEECSS-----EEEEEEEE-EESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSE-----------------
T ss_pred             cEEEEEEEEcccccceEEEEEEEE-eecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccc-----------------
Confidence            88999999884     2  22223 357889999876 444 44443 478999998766311                 


Q ss_pred             CCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC-CeEEEEEe--cCCCceEEEEEcCCCC-EEE
Q psy11015        275 DESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET-GTILQSLT--EPGEAIRAAAGRTGGP-IRA  350 (360)
Q Consensus       275 ~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~-~~~~~~l~--~h~~~v~~~~~~~~g~-~la  350 (360)
                              .+...+.. ...+.++...  +++++.|..-..+.++.... ...+..+.  .....++++.|-+++. +++
T Consensus       121 --------~~~~~~~~-~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~  189 (321)
T PF03178_consen  121 --------LKKAFYDS-PFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIV  189 (321)
T ss_dssp             --------EEEEEE-B-SSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEE
T ss_pred             --------hhhheecc-eEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEE
Confidence                    12222222 2366666664  67999999888888774432 33333332  2355688888875554 444


Q ss_pred             ccccc
Q psy11015        351 SPLLL  355 (360)
Q Consensus       351 s~~~~  355 (360)
                      +-.++
T Consensus       190 ~D~~g  194 (321)
T PF03178_consen  190 GDKDG  194 (321)
T ss_dssp             EETTS
T ss_pred             EcCCC
Confidence            43333

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PHA02713 hypothetical protein; Provisional

Probab=94.99  E-value=0.28  Score=48.14  Aligned_cols=33  Identities=12%  Similarity=0.177  Sum_probs=25.4

Q ss_pred             CCCEEEEEECCC--cEEEEECCCCeEEEEEecCCC
Q psy11015        303 DGEQVITASWDR--VANLFDVETGTILQSLTEPGE  335 (360)
Q Consensus       303 ~g~~l~tgs~dg--~i~iwd~~~~~~~~~l~~h~~  335 (360)
                      +|...++|+.||  .+..||..+.+.-.....|..
T Consensus       512 ~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~~~  546 (557)
T PHA02713        512 DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQHSN  546 (557)
T ss_pred             CCEEEEEeeecceeehhhcCcccccccchhhhcCC
Confidence            778889999998  788899888877655555544

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.95  E-value=0.83  Score=39.99  Aligned_cols=129  Identities=10%  Similarity=0.168  Sum_probs=91.2

Q ss_pred             eecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC-CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      +.|-+..|.++.|+|+.+.|++....+.-.||=...|..+.++.- .-+....|.|..+|+++++--.++.+.++.+..+
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~  160 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD  160 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence            456566699999999999999988888888998888988887651 1233567888878888888888999999887765


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      ........                  ..-++............++|.|..+.|..+-.-.-+.||.+.
T Consensus       161 t~~~~~~~------------------~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~  210 (316)
T COG3204         161 TTVISAKV------------------QKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT  210 (316)
T ss_pred             ccEEeccc------------------eEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence            33322110                  001122222225567889999988888888877777777665

>PRK13684 Ycf48-like protein; Provisional

Probab=94.83  E-value=3.1  Score=37.98  Aligned_cols=148  Identities=9%  Similarity=-0.018  Sum_probs=80.3

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEE-EEECCCCeEEEEE-eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVR-LWSTQTGKCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~-iwd~~~~~~~~~~-~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      .+.+.++.+.|++.+++.+. .|.+. -++ ..++.-... .+-...++++.+.|+++.++.| ..|.+.+=....+   
T Consensus       172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G---  245 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDL---  245 (334)
T ss_pred             cceEEEEEECCCCeEEEEeC-CceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCC---
Confidence            45788999999886665554 45443 222 122211112 2334578999999998877665 4565542112222   


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe---cC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT---EP  333 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~---~h  333 (360)
                                            ..++.+..- ..-...+.++.+.|++..+++ +.+|.+. .....|+.-....   .-
T Consensus       246 ----------------------~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~-G~~G~v~-~S~d~G~tW~~~~~~~~~  301 (334)
T PRK13684        246 ----------------------ESWSKPIIPEITNGYGYLDLAYRTPGEIWAG-GGNGTLL-VSKDGGKTWEKDPVGEEV  301 (334)
T ss_pred             ----------------------CccccccCCccccccceeeEEEcCCCCEEEE-cCCCeEE-EeCCCCCCCeECCcCCCC
Confidence                                  011111100 001234678889987765554 4567554 3444444322222   22


Q ss_pred             CCceEEEEEcCCCCEEEcccccch
Q psy11015        334 GEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      ....+.+.|.+++..++.+..+.|
T Consensus       302 ~~~~~~~~~~~~~~~~~~G~~G~i  325 (334)
T PRK13684        302 PSNFYKIVFLDPEKGFVLGQRGVL  325 (334)
T ss_pred             CcceEEEEEeCCCceEEECCCceE
Confidence            235788888888888887776553

>KOG2395|consensus

Probab=94.70  E-value=0.53  Score=44.35  Aligned_cols=128  Identities=13%  Similarity=0.150  Sum_probs=81.5

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCCCC--E-----EEEEeCCCcEEEEECCCC-e-EEEEEeCCCc----CeEEEE
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQP--V-----LGSASADRTVRLWSTQTG-K-CVLQYSGHSG----SVNSVR  229 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~--~-----l~sgs~Dg~v~iwd~~~~-~-~~~~~~~h~~----~v~~i~  229 (360)
                      +.-+.+.|..+.+..-|.+ |.-+.+.|+..  .     -+.|=.|..|.-||.+-. . .+..-++|..    ...|++
T Consensus       359 ~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~a  437 (644)
T KOG2395|consen  359 YKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFA  437 (644)
T ss_pred             eeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceee
Confidence            3334466777777777766 66666777543  2     334556788888998732 2 3333333332    234444


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      -..+| +++.||.+|.|++||- .+                           ...-..+.+...+|..+..+.+|++|+.
T Consensus       438 TT~sG-~IvvgS~~GdIRLYdr-i~---------------------------~~AKTAlPgLG~~I~hVdvtadGKwil~  488 (644)
T KOG2395|consen  438 TTESG-YIVVGSLKGDIRLYDR-IG---------------------------RRAKTALPGLGDAIKHVDVTADGKWILA  488 (644)
T ss_pred             ecCCc-eEEEeecCCcEEeehh-hh---------------------------hhhhhcccccCCceeeEEeeccCcEEEE
Confidence            43344 7999999999999985 22                           1122345577789999999999999875


Q ss_pred             EECCCcEEEEEC
Q psy11015        310 ASWDRVANLFDV  321 (360)
Q Consensus       310 gs~dg~i~iwd~  321 (360)
                      .+ +..+.+.++
T Consensus       489 Tc-~tyLlLi~t  499 (644)
T KOG2395|consen  489 TC-KTYLLLIDT  499 (644)
T ss_pred             ec-ccEEEEEEE
Confidence            55 456666664

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.34  E-value=0.15  Score=30.68  Aligned_cols=32  Identities=34%  Similarity=0.481  Sum_probs=26.4

Q ss_pred             cCeEEEEEeeCC---CEEEEEeCCCcEEEEEcccC
Q psy11015        223 GSVNSVRFLPNK---DLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       223 ~~v~~i~~~p~~---~~l~s~s~d~~i~vwd~~~~  254 (360)
                      |.|+++.|+|.+   ++|+-+-..+.|.|+|++++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            578999999854   58888888899999999864

It contains a characteristic DLL sequence motif.

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=94.24  E-value=0.99  Score=43.29  Aligned_cols=118  Identities=14%  Similarity=0.240  Sum_probs=70.8

Q ss_pred             cCCCCEEEEEECCC----CCEEEEEeCCCcEEEEECCC-----CeEEEEEeCCCc-----CeEEEEEeeCCCEEEEEeCC
Q psy11015        178 GHRDGVWDVAVRPG----QPVLGSASADRTVRLWSTQT-----GKCVLQYSGHSG-----SVNSVRFLPNKDLVLSASGD  243 (360)
Q Consensus       178 ~h~~~V~~l~~~~~----~~~l~sgs~Dg~v~iwd~~~-----~~~~~~~~~h~~-----~v~~i~~~p~~~~l~s~s~d  243 (360)
                      |.-.-|..++|.|-    -+.+....-.+.|.||.+..     ++.+.....+-+     -...+.|||....++.-...
T Consensus        54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~  133 (671)
T PF15390_consen   54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTAR  133 (671)
T ss_pred             eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecC
Confidence            33345889999885    33556666677999999862     233332221111     12356799988877665555


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVE  322 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~  322 (360)
                      ..-.+++++.....                          ....+ .-.+.|.|.+|.+||+.|+.+- ..=.-+|||-.
T Consensus       134 dvSV~~sV~~d~sr--------------------------VkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  134 DVSVLPSVHCDSSR--------------------------VKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA  186 (671)
T ss_pred             ceeEeeeeeeCCce--------------------------EEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence            44445665543111                          12223 3457899999999999886653 23345788843

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.04  E-value=0.22  Score=29.95  Aligned_cols=31  Identities=10%  Similarity=0.165  Sum_probs=26.0

Q ss_pred             CcEEEEEEcCCC---CEEEEEECCCcEEEEECCC
Q psy11015        293 NVVIAADWLSDG---EQVITASWDRVANLFDVET  323 (360)
Q Consensus       293 ~~v~~i~~sp~g---~~l~tgs~dg~i~iwd~~~  323 (360)
                      +.|.+++|+|..   ++|+.+-.-|.+.|+|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            468899999854   5888888889999999995

It contains a characteristic DLL sequence motif.

>KOG2247|consensus

Probab=93.78  E-value=0.0088  Score=55.24  Aligned_cols=139  Identities=13%  Similarity=0.141  Sum_probs=98.1

Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCCcEEEEEcccCeeEeeeCC
Q psy11015        184 WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIWQAVINWECLVSNN  262 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~~i~vwd~~~~~~~~~~~~  262 (360)
                      ....|.|.+.-++.++.+..|..||-. ++...... -.+....++|.-+|+.++ .+-..+.+.+||+.+....     
T Consensus        38 i~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq-----  110 (615)
T KOG2247|consen   38 IIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ-----  110 (615)
T ss_pred             ceeeEecCCCceehhhhhhHHHhhhhh-cceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH-----
Confidence            345677877778999999999999954 43333333 345667888887777544 4566788999998765211     


Q ss_pred             CCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEE
Q psy11015        263 DNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA  341 (360)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~  341 (360)
                                            ...+.+ |+..  -+.|++.+..++.|...|.+.||+..+.+.+.....|...+++++
T Consensus       111 ----------------------qLE~gg~~s~s--ll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~a  166 (615)
T KOG2247|consen  111 ----------------------QLESGGTSSKS--LLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIA  166 (615)
T ss_pred             ----------------------HHhccCcchHH--HHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEE
Confidence                                  111111 2222  278999999999999999999999988877766766888999999


Q ss_pred             EcCCCCEEEccc
Q psy11015        342 GRTGGPIRASPL  353 (360)
Q Consensus       342 ~~~~g~~las~~  353 (360)
                      |.+.+..+..+-
T Consensus       167 v~lEd~vil~dc  178 (615)
T KOG2247|consen  167 VTLEDYVILCDC  178 (615)
T ss_pred             ecccceeeecCc
Confidence            998877655433

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=93.65  E-value=5.1  Score=35.89  Aligned_cols=108  Identities=19%  Similarity=0.162  Sum_probs=58.3

Q ss_pred             eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEE
Q psy11015        219 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA  298 (360)
Q Consensus       219 ~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i  298 (360)
                      ..-.+.+..+..+++|.++++++....+.-||--..                          .+.+...  .-...|.++
T Consensus       141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~--------------------------~w~~~~r--~~~~riq~~  192 (302)
T PF14870_consen  141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQT--------------------------TWQPHNR--NSSRRIQSM  192 (302)
T ss_dssp             -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-S--------------------------S-EEEE----SSS-EEEE
T ss_pred             cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCc--------------------------cceEEcc--Cccceehhc
Confidence            445678999999999998888776666677874321                          1222222  235789999


Q ss_pred             EEcCCCCEEEEEECCCcEEEEEC-CCCeEEEE--Ee--cCCCceEEEEEcCCCCEEEccccc
Q psy11015        299 DWLSDGEQVITASWDRVANLFDV-ETGTILQS--LT--EPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       299 ~~sp~g~~l~tgs~dg~i~iwd~-~~~~~~~~--l~--~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      .|.|++...+++ ..|.|+.=+. ..+..-..  ..  ...-.+.+++|.+++.+.|++..+
T Consensus       193 gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G  253 (302)
T PF14870_consen  193 GFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG  253 (302)
T ss_dssp             EE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred             eecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence            999998776654 7888888872 22221111  11  122357899999888877766554

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=93.61  E-value=1.5  Score=42.28  Aligned_cols=136  Identities=15%  Similarity=0.091  Sum_probs=76.3

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE------------------eCCCcEEEEEcccCe
Q psy11015        194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA------------------SGDKSVHIWQAVINW  255 (360)
Q Consensus       194 ~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~------------------s~d~~i~vwd~~~~~  255 (360)
                      .++.++.+|.+...|..+|+.+......   ...+...|  ..++.+                  ..++.+.-.|+.+|.
T Consensus       303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~  377 (488)
T cd00216         303 AIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGK  377 (488)
T ss_pred             EEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCc
Confidence            5788889999999999999988776421   01223333  223222                  235677777887776


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCC
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE  335 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~  335 (360)
                      ...........                 ....+... .....+..  .+..++.|+.||.|+.+|..+|+.+-+.+.. .
T Consensus       378 ~~W~~~~~~~~-----------------~~~~~g~~-~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~-~  436 (488)
T cd00216         378 VVWEKREGTIR-----------------DSWNIGFP-HWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFRTP-S  436 (488)
T ss_pred             EeeEeeCCccc-----------------cccccCCc-ccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEECC-C
Confidence            55432111000                 00000000 00011222  5678899999999999999999998877643 2


Q ss_pred             ceEE--EEEcCCCCEEEccccc
Q psy11015        336 AIRA--AAGRTGGPIRASPLLL  355 (360)
Q Consensus       336 ~v~~--~~~~~~g~~las~~~~  355 (360)
                      .+.+  +.+..+|.+.+...++
T Consensus       437 ~~~a~P~~~~~~g~~yv~~~~g  458 (488)
T cd00216         437 GIQATPMTYEVNGKQYVGVMVG  458 (488)
T ss_pred             CceEcCEEEEeCCEEEEEEEec
Confidence            3322  3344466554444333

The alignment model contains an 8-bladed beta-propeller.

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=93.29  E-value=6  Score=38.63  Aligned_cols=31  Identities=23%  Similarity=0.326  Sum_probs=26.1

Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEecC
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTEP  333 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h  333 (360)
                      .|..++.++.||.++.+|.+||+.+-.++-.
T Consensus       471 ~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       471 AGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             CCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence            4557777888999999999999999887654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=93.23  E-value=2.3  Score=37.05  Aligned_cols=97  Identities=21%  Similarity=0.133  Sum_probs=59.8

Q ss_pred             CeEEEEEeeCCCEEEEEe---CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE
Q psy11015        224 SVNSVRFLPNKDLVLSAS---GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW  300 (360)
Q Consensus       224 ~v~~i~~~p~~~~l~s~s---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~  300 (360)
                      .+.+.++++++..++...   ....+.++.....                             ....+.+  ..+..-+|
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~-----------------------------~~~~~~g--~~l~~PS~   73 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP-----------------------------VRPVLTG--GSLTRPSW   73 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc-----------------------------ceeeccC--Cccccccc
Confidence            688999999998776655   2334555543222                             1111122  26778899


Q ss_pred             cCCCCEEEEEECCCcEEEEE-CCCCeEE-EEEecC--CCceEEEEEcCCCCEEEc
Q psy11015        301 LSDGEQVITASWDRVANLFD-VETGTIL-QSLTEP--GEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd-~~~~~~~-~~l~~h--~~~v~~~~~~~~g~~las  351 (360)
                      +++|...+....+...+++. ..++... ..+...  ...|+++.++|+|..+|-
T Consensus        74 d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~  128 (253)
T PF10647_consen   74 DPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAV  128 (253)
T ss_pred             cCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEE
Confidence            99987777766666667773 3333322 122222  128999999999987663

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PRK10115 protease 2; Provisional

Probab=93.12  E-value=11  Score=38.17  Aligned_cols=71  Identities=11%  Similarity=0.066  Sum_probs=44.2

Q ss_pred             CEEEEEECCCCCEEEEEeC-CC----cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEE
Q psy11015        182 GVWDVAVRPGQPVLGSASA-DR----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQ  250 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~-Dg----~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd  250 (360)
                      .+..+.++|++++|+.+.. +|    .+++-|+.+|..+...-....  ..++|.+|++.|+-+..+      ..|..++
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~  205 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT  205 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence            3566789999997766533 23    588899988863322211222  469999999866555443      2455566


Q ss_pred             cccC
Q psy11015        251 AVIN  254 (360)
Q Consensus       251 ~~~~  254 (360)
                      +.++
T Consensus       206 lgt~  209 (686)
T PRK10115        206 IGTP  209 (686)
T ss_pred             CCCC
Confidence            6554

>PHA02713 hypothetical protein; Provisional

Probab=93.07  E-value=3.3  Score=40.73  Aligned_cols=52  Identities=6%  Similarity=0.092  Sum_probs=26.8

Q ss_pred             CCCEEEEEeCCC-----cEEEEECCCCeE--EEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        191 GQPVLGSASADR-----TVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       191 ~~~~l~sgs~Dg-----~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      ++.+.+.||.++     +|..||..+..-  +..+.........+.+  +|.+.+.||.++
T Consensus       351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~  409 (557)
T PHA02713        351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTE  409 (557)
T ss_pred             CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCc
Confidence            456777777764     477888876532  1122111111112222  677777777653

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=93.03  E-value=2.5  Score=35.43  Aligned_cols=49  Identities=14%  Similarity=0.196  Sum_probs=37.9

Q ss_pred             CEEEEEeCCCcEEEEECCC--CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC
Q psy11015        193 PVLGSASADRTVRLWSTQT--GKCVLQYSGHSGSVNSVRFLPNKDLVLSASG  242 (360)
Q Consensus       193 ~~l~sgs~Dg~v~iwd~~~--~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~  242 (360)
                      +.|+.+.....|.+|++..  .+.+..|. .-+.|..+.++.-|++++|--.
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~   79 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEE   79 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEe
Confidence            4565556677899999983  35667776 4588999999999999998643

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=92.93  E-value=1.5  Score=44.18  Aligned_cols=27  Identities=19%  Similarity=0.215  Sum_probs=21.2

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRL  206 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~i  206 (360)
                      .-.|..+.++|+|.+++..|..|.+.+
T Consensus        84 ~f~v~~i~~n~~g~~lal~G~~~v~V~  110 (717)
T PF10168_consen   84 LFEVHQISLNPTGSLLALVGPRGVVVL  110 (717)
T ss_pred             ceeEEEEEECCCCCEEEEEcCCcEEEE
Confidence            346888889999999999888765544

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG1916|consensus

Probab=92.84  E-value=0.14  Score=50.94  Aligned_cols=69  Identities=19%  Similarity=0.178  Sum_probs=44.9

Q ss_pred             EEEEEECC---CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEE-----------EeeCCCEEEEEeCCCcEEE
Q psy11015        183 VWDVAVRP---GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR-----------FLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       183 V~~l~~~~---~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~-----------~~p~~~~l~s~s~d~~i~v  248 (360)
                      +.-+.|+|   ..-++..+-.+++|++-+...... ..+.+|...+..++           .+|||..|+.++.||.++.
T Consensus       183 ~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f  261 (1283)
T KOG1916|consen  183 PQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGF  261 (1283)
T ss_pred             cceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccce
Confidence            34444554   445778888889998876654321 23344665555443           5778888888888888888


Q ss_pred             EEcc
Q psy11015        249 WQAV  252 (360)
Q Consensus       249 wd~~  252 (360)
                      |.+.
T Consensus       262 ~Qiy  265 (1283)
T KOG1916|consen  262 YQIY  265 (1283)
T ss_pred             eeee
Confidence            8754

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=92.78  E-value=1.3  Score=37.62  Aligned_cols=86  Identities=14%  Similarity=0.177  Sum_probs=55.4

Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      +..++.++++.+.+|.+++||+.++........-             ......... .-......|..+.++.+|.-+++
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si-------------~pll~~~~~-~~~~~~~~i~~~~lt~~G~PiV~   83 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSI-------------APLLNSSPV-SDKSSSPNITSCSLTSNGVPIVT   83 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccH-------------HHHhccccc-ccCCCCCcEEEEEEcCCCCEEEE
Confidence            4457889999999999999999987654331000             000000000 00045567899999989988887


Q ss_pred             EECCCcEEEEECCCCeEEEEE
Q psy11015        310 ASWDRVANLFDVETGTILQSL  330 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~~~~l  330 (360)
                      -+ +|....|+..-+..+...
T Consensus        84 ls-ng~~y~y~~~L~~W~~vs  103 (219)
T PF07569_consen   84 LS-NGDSYSYSPDLGCWIRVS  103 (219)
T ss_pred             Ee-CCCEEEeccccceeEEec
Confidence            66 588899998766655433

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG2377|consensus

Probab=92.70  E-value=2.9  Score=38.97  Aligned_cols=136  Identities=10%  Similarity=0.033  Sum_probs=78.0

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCC---eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        185 DVAVRPGQPVLGSASADRTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      .+-|...++ .+-|-..|.+.-|-+...   -++..-....|+|.+|.|++|.+.++.--.+++|-+++........   
T Consensus        27 gvFfDDaNk-qlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l---  102 (657)
T KOG2377|consen   27 GVFFDDANK-QLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQL---  102 (657)
T ss_pred             ceeeccCcc-eEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhh---
Confidence            334444333 333333455555655422   2222233456799999999999999999999999999864331111   


Q ss_pred             CCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC-CeEEEEEecCCCceEEE
Q psy11015        262 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET-GTILQSLTEPGEAIRAA  340 (360)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~-~~~~~~l~~h~~~v~~~  340 (360)
                                           ....+....+..|.+..|+.. .-+|..+..| +-+|-+.. ...+...+.|.-.|.=.
T Consensus       103 ---------------------~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy  159 (657)
T KOG2377|consen  103 ---------------------EYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWY  159 (657)
T ss_pred             ---------------------HHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEE
Confidence                                 112222234456888999854 4555555444 45565432 23344445566666666


Q ss_pred             EEcCCCC
Q psy11015        341 AGRTGGP  347 (360)
Q Consensus       341 ~~~~~g~  347 (360)
                      +|.++.+
T Consensus       160 ~yc~et~  166 (657)
T KOG2377|consen  160 MYCPETA  166 (657)
T ss_pred             EEccccc
Confidence            7777655

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=92.48  E-value=6.2  Score=36.25  Aligned_cols=172  Identities=19%  Similarity=0.178  Sum_probs=89.4

Q ss_pred             ecCCeEEEeeecCccceeee--eee---ecCCCCEEEEEECCCCCEEEEE--eCCC---cEEEEECCCCeEEEEEeC-CC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKI--RSF---SGHRDGVWDVAVRPGQPVLGSA--SADR---TVRLWSTQTGKCVLQYSG-HS  222 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~--~~l---~~h~~~V~~l~~~~~~~~l~sg--s~Dg---~v~iwd~~~~~~~~~~~~-h~  222 (360)
                      |..+-.+..+..+..+++..  ...   ..-..-+..+.|.+++..|+..  ..+.   .+.++|..++.+...+.. ..
T Consensus       152 G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~  231 (353)
T PF00930_consen  152 GDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSD  231 (353)
T ss_dssp             TS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESS
T ss_pred             CCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCC
Confidence            44444555544444443321  111   2334567888999998833333  3332   466778877754433321 22


Q ss_pred             cCe---EEEEEe-eCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEE
Q psy11015        223 GSV---NSVRFL-PNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA  297 (360)
Q Consensus       223 ~~v---~~i~~~-p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~  297 (360)
                      +.|   ..+.|. +++. ++.....||.-+|+-+....                           .....++...-.|..
T Consensus       232 ~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~---------------------------~~~~~lT~G~~~V~~  284 (353)
T PF00930_consen  232 GWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDG---------------------------GKPRQLTSGDWEVTS  284 (353)
T ss_dssp             SSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTS---------------------------SEEEESS-SSS-EEE
T ss_pred             cceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccc---------------------------cceeccccCceeecc
Confidence            222   255554 5554 55555677876666443221                           123344444555644


Q ss_pred             -EEEcCCCCEE-EEEECC----CcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        298 -ADWLSDGEQV-ITASWD----RVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       298 -i~~sp~g~~l-~tgs~d----g~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                       +.|.++++.| ++|..+    ..|..-++..+..+..+....+....+.|+|+|++++-.
T Consensus       285 i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~  345 (353)
T PF00930_consen  285 ILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDT  345 (353)
T ss_dssp             EEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEE
T ss_pred             cceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEE
Confidence             7788887765 456543    245555666244556666544433689999999987743

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=92.47  E-value=4.5  Score=36.37  Aligned_cols=112  Identities=11%  Similarity=0.076  Sum_probs=66.8

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCC--C----e-EEEEEeCCCcCeEEEEEeeCCCEEEEEe
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQT--G----K-CVLQYSGHSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~--~----~-~~~~~~~h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      +..++-+.+|-..-+.|+|+||++.|+.+-. .+.|.-|++..  +    + ....+....+..-.++...+|.+.+++.
T Consensus       152 g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~  231 (307)
T COG3386         152 GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAV  231 (307)
T ss_pred             CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecc
Confidence            3444444555555678999999986666544 47787777752  2    1 1122223345566677777887775544


Q ss_pred             CCC-cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc-CCCCEEEEE
Q psy11015        242 GDK-SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL-SDGEQVITA  310 (360)
Q Consensus       242 ~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s-p~g~~l~tg  310 (360)
                      .+| .|.+|+.. +                            ..+....-....+++++|- |+.+.|+..
T Consensus       232 ~~g~~v~~~~pd-G----------------------------~l~~~i~lP~~~~t~~~FgG~~~~~L~iT  273 (307)
T COG3386         232 WGGGRVVRFNPD-G----------------------------KLLGEIKLPVKRPTNPAFGGPDLNTLYIT  273 (307)
T ss_pred             cCCceEEEECCC-C----------------------------cEEEEEECCCCCCccceEeCCCcCEEEEE
Confidence            444 78888766 4                            2344444444677888883 444555433

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=92.46  E-value=3.1  Score=39.01  Aligned_cols=54  Identities=11%  Similarity=0.084  Sum_probs=44.6

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS  224 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~  224 (360)
                      .....|......+.+++.+|.+.+.++...=|.|.++|+.++..++.++|....
T Consensus       298 ~~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA  351 (415)
T PF14655_consen  298 PMRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA  351 (415)
T ss_pred             ceEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccc
Confidence            445566677778999999999998888888899999999999888888876543

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=92.22  E-value=2.2  Score=40.10  Aligned_cols=98  Identities=11%  Similarity=0.132  Sum_probs=59.3

Q ss_pred             eEEEEEeeCCCEEEEE-eCCC----cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEE
Q psy11015        225 VNSVRFLPNKDLVLSA-SGDK----SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD  299 (360)
Q Consensus       225 v~~i~~~p~~~~l~s~-s~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~  299 (360)
                      +..+.++|+|++++-+ +..|    +++++|+.++.....                           .+..  .....+.
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d---------------------------~i~~--~~~~~~~  176 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPD---------------------------GIEN--PKFSSVS  176 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEE---------------------------EEEE--EESEEEE
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCC---------------------------cccc--cccceEE
Confidence            3467889999987654 3333    599999998843321                           1111  1112399


Q ss_pred             EcCCCCEEEEEECCC-----------cEEEEECCCCeE--EEEEecCCCc--eEEEEEcCCCCEEEc
Q psy11015        300 WLSDGEQVITASWDR-----------VANLFDVETGTI--LQSLTEPGEA--IRAAAGRTGGPIRAS  351 (360)
Q Consensus       300 ~sp~g~~l~tgs~dg-----------~i~iwd~~~~~~--~~~l~~h~~~--v~~~~~~~~g~~las  351 (360)
                      |.++++.|+-...+.           .|+.|.+.+...  ...+......  ...+..+++|++++-
T Consensus       177 W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i  243 (414)
T PF02897_consen  177 WSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFI  243 (414)
T ss_dssp             ECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEE
T ss_pred             EeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEE
Confidence            999998876655433           277888766532  2344433332  567889999998764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=92.06  E-value=3.4  Score=41.22  Aligned_cols=114  Identities=18%  Similarity=0.163  Sum_probs=74.8

Q ss_pred             CEEEEEECC--CCCEEEEEeCCCcEEEEECCC-------C-------------eEEEEEeCCCcCeEEEEEe--eCCCEE
Q psy11015        182 GVWDVAVRP--GQPVLGSASADRTVRLWSTQT-------G-------------KCVLQYSGHSGSVNSVRFL--PNKDLV  237 (360)
Q Consensus       182 ~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~-------~-------------~~~~~~~~h~~~v~~i~~~--p~~~~l  237 (360)
                      .|+-|.+..  ....|+.|..||.|.+|.+++       .             ++-..+. ...++++++++  ...++|
T Consensus       102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlI  180 (717)
T PF08728_consen  102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLI  180 (717)
T ss_pred             eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEE
Confidence            455555433  345899999999999997631       0             1122222 34579999998  778899


Q ss_pred             EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-----C-EEEEEE
Q psy11015        238 LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-----E-QVITAS  311 (360)
Q Consensus       238 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-----~-~l~tgs  311 (360)
                      |+++....|.||-........                         ....-..|...|.+++|.++.     . +++.++
T Consensus       181 AVSsNs~~VTVFaf~l~~~r~-------------------------~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~d  235 (717)
T PF08728_consen  181 AVSSNSQEVTVFAFALVDERF-------------------------YHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATD  235 (717)
T ss_pred             EEecCCceEEEEEEecccccc-------------------------ccccccccccCCCeeEeecCCCCCccceEEEEEe
Confidence            999888888888654320000                         000011255678899997643     2 788899


Q ss_pred             CCCcEEEEEC
Q psy11015        312 WDRVANLFDV  321 (360)
Q Consensus       312 ~dg~i~iwd~  321 (360)
                      -.|.+.+|++
T Consensus       236 I~G~v~~~~I  245 (717)
T PF08728_consen  236 ISGEVWTFKI  245 (717)
T ss_pred             ccCcEEEEEE
Confidence            9999999887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=91.99  E-value=1.3  Score=37.70  Aligned_cols=66  Identities=15%  Similarity=0.233  Sum_probs=49.7

Q ss_pred             ECCCCCEEEEEeCCCcEEEEECCCCeEEEEE-------e-------CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q psy11015        188 VRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------S-------GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       188 ~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-------~-------~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~  253 (360)
                      +...+.+|+.-..+|.+++||+.+++++..-       .       .....|..+.+..+|.-+++-+ +|....|+..-
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            3445778999999999999999988654332       1       2456788999998898777765 46788888764


Q ss_pred             C
Q psy11015        254 N  254 (360)
Q Consensus       254 ~  254 (360)
                      +
T Consensus        97 ~   97 (219)
T PF07569_consen   97 G   97 (219)
T ss_pred             c
Confidence            4

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=91.52  E-value=12  Score=35.01  Aligned_cols=146  Identities=8%  Similarity=-0.063  Sum_probs=78.6

Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015        183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNN  262 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~  262 (360)
                      ...+..++++.+++.|..-..++-||--...-...-......+.++.|.+++.+++++ .+|.+. |....+.       
T Consensus       241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G~-------  311 (398)
T PLN00033        241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLY-VSKGTGL-------  311 (398)
T ss_pred             eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEE-EecCCCC-------
Confidence            4445566776655555544333344432110011111234568899999998877665 555543 3222220       


Q ss_pred             CCCCCCCCCCCCCCCcccccc--ceeEeeC--CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE---ecCCC
Q psy11015        263 DNDSDLDESKEPDESSITLRT--PVKELLG--HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL---TEPGE  335 (360)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l---~~h~~  335 (360)
                                        .+.  .......  -...+.++.|.+++..++ ++.+|.+.... ..|+.-...   ..-..
T Consensus       312 ------------------~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a-~G~~G~v~~s~-D~G~tW~~~~~~~~~~~  371 (398)
T PLN00033        312 ------------------TEEDFDFEEADIKSRGFGILDVGYRSKKEAWA-AGGSGILLRST-DGGKSWKRDKGADNIAA  371 (398)
T ss_pred             ------------------cccccceeecccCCCCcceEEEEEcCCCcEEE-EECCCcEEEeC-CCCcceeEccccCCCCc
Confidence                              000  1111111  123588899987766555 45568766654 344432222   22345


Q ss_pred             ceEEEEEcCCCCEEEcccccch
Q psy11015        336 AIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~~~~~i  357 (360)
                      .++.+.|.+++..++++..+.|
T Consensus       372 ~ly~v~f~~~~~g~~~G~~G~i  393 (398)
T PLN00033        372 NLYSVKFFDDKKGFVLGNDGVL  393 (398)
T ss_pred             ceeEEEEcCCCceEEEeCCcEE
Confidence            7899999998998888877653

>KOG4441|consensus

Probab=91.49  E-value=5.8  Score=39.10  Aligned_cols=133  Identities=19%  Similarity=0.164  Sum_probs=69.8

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC------CcEEEEECCCCeE--EEEEeCCCcCeEEEEEeeC
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD------RTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D------g~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~  233 (360)
                      .+++....+.....+..... -.++++.. +.+.++||.|      .++-.||..+.+-  +..+...........+  +
T Consensus       305 ~yd~~~~~w~~~a~m~~~r~-~~~~~~~~-~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l--~  380 (571)
T KOG4441|consen  305 CYDPKTNEWSSLAPMPSPRC-RVGVAVLN-GKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVL--D  380 (571)
T ss_pred             EecCCcCcEeecCCCCcccc-cccEEEEC-CEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEE--C
Confidence            34444444444444443322 33444443 4588889988      3567788776542  2222212222222222  6


Q ss_pred             CCEEEEEeCCCc-----EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015        234 KDLVLSASGDKS-----VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI  308 (360)
Q Consensus       234 ~~~l~s~s~d~~-----i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~  308 (360)
                      |.+.+.||.||.     +-.||..++                          .|..+..+.........+.+  +|...+
T Consensus       381 g~iYavGG~dg~~~l~svE~YDp~~~--------------------------~W~~va~m~~~r~~~gv~~~--~g~iYi  432 (571)
T KOG4441|consen  381 GKLYAVGGFDGEKSLNSVECYDPVTN--------------------------KWTPVAPMLTRRSGHGVAVL--GGKLYI  432 (571)
T ss_pred             CEEEEEeccccccccccEEEecCCCC--------------------------cccccCCCCcceeeeEEEEE--CCEEEE
Confidence            778888998864     556666544                          22333322222222333333  677778


Q ss_pred             EEECCC------cEEEEECCCCeE
Q psy11015        309 TASWDR------VANLFDVETGTI  326 (360)
Q Consensus       309 tgs~dg------~i~iwd~~~~~~  326 (360)
                      +||.|+      ++..||..+..+
T Consensus       433 ~GG~~~~~~~l~sve~YDP~t~~W  456 (571)
T KOG4441|consen  433 IGGGDGSSNCLNSVECYDPETNTW  456 (571)
T ss_pred             EcCcCCCccccceEEEEcCCCCce
Confidence            888664      467888877654

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=91.25  E-value=3.6  Score=38.93  Aligned_cols=132  Identities=15%  Similarity=0.122  Sum_probs=80.0

Q ss_pred             CCCCCE-EEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-------EEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        189 RPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-------LVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       189 ~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-------~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      ..+..+ +..|+.-..+.--|++.|+.+..+.-|...  -+.|.|+..       .-+.|-.+..|.-.|.+....    
T Consensus       476 ~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gN----  549 (776)
T COG5167         476 DNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGN----  549 (776)
T ss_pred             cCCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCC----
Confidence            334444 444666667888899999999999977665  577877432       233455555555555442210    


Q ss_pred             CCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC----CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS----DGEQVITASWDRVANLFDVETGTILQSLTEPGEA  336 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp----~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~  336 (360)
                                             .+... .....++.-.|+.    ...|+|.||..|-|++||--.-..-..+.+.+..
T Consensus       550 -----------------------Ki~v~-esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~a  605 (776)
T COG5167         550 -----------------------KIKVV-ESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDA  605 (776)
T ss_pred             -----------------------ceeee-eehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccc
Confidence                                   01110 0111122222221    3459999999999999995433333445667888


Q ss_pred             eEEEEEcCCCCEEE
Q psy11015        337 IRAAAGRTGGPIRA  350 (360)
Q Consensus       337 v~~~~~~~~g~~la  350 (360)
                      |-.+..+.+|.++.
T Consensus       606 Ik~idvta~Gk~il  619 (776)
T COG5167         606 IKHIDVTANGKHIL  619 (776)
T ss_pred             eeeeEeecCCcEEE
Confidence            99999998887554

>TIGR03032 conserved hypothetical protein TIGR03032

Probab=91.18  E-value=5.9  Score=35.33  Aligned_cols=106  Identities=19%  Similarity=0.159  Sum_probs=68.0

Q ss_pred             EEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccce
Q psy11015        206 LWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPV  285 (360)
Q Consensus       206 iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (360)
                      ++|+.+++.+..  |. .-..+..|+ +|++.++-+..|.+..+|..+|...                          ++
T Consensus       189 vidv~s~evl~~--GL-smPhSPRWh-dgrLwvldsgtGev~~vD~~~G~~e--------------------------~V  238 (335)
T TIGR03032       189 VIDIPSGEVVAS--GL-SMPHSPRWY-QGKLWLLNSGRGELGYVDPQAGKFQ--------------------------PV  238 (335)
T ss_pred             EEEeCCCCEEEc--Cc-cCCcCCcEe-CCeEEEEECCCCEEEEEcCCCCcEE--------------------------EE
Confidence            356666654432  11 122344565 6888888899999999998776322                          23


Q ss_pred             eEeeCCCCcEEEEEEcCCCCEEEEEEC----C----------------CcEEEEECCCCeEEEEEe--cCCCceEEEEEc
Q psy11015        286 KELLGHSNVVIAADWLSDGEQVITASW----D----------------RVANLFDVETGTILQSLT--EPGEAIRAAAGR  343 (360)
Q Consensus       286 ~~~~~h~~~v~~i~~sp~g~~l~tgs~----d----------------g~i~iwd~~~~~~~~~l~--~h~~~v~~~~~~  343 (360)
                      ..+.   +...+++|.  |+++++|-.    +                .-|.+.|+++|..++.++  +.-.++.+++.-
T Consensus       239 a~vp---G~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vidl~tG~vv~~l~feg~v~EifdV~vL  313 (335)
T TIGR03032       239 AFLP---GFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAVIDLNSGDVVHWLRFEGVIEEIYDVAVL  313 (335)
T ss_pred             EECC---CCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEEEECCCCCEEEEEEeCCceeEEEEEEEe
Confidence            3332   345667775  666665532    1                237788999999888765  445688999998


Q ss_pred             CCC
Q psy11015        344 TGG  346 (360)
Q Consensus       344 ~~g  346 (360)
                      |+-
T Consensus       314 Pg~  316 (335)
T TIGR03032       314 PGV  316 (335)
T ss_pred             cCC
Confidence            874

This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.

>PHA03098 kelch-like protein; Provisional

Probab=91.10  E-value=7  Score=38.21  Aligned_cols=62  Identities=15%  Similarity=0.032  Sum_probs=31.2

Q ss_pred             CCCEEEEEeCC-----CcEEEEECCCCeEEE--EEeCCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEEcccC
Q psy11015        191 GQPVLGSASAD-----RTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~D-----g~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd~~~~  254 (360)
                      ++.+++.||.+     ..+..||..+.+-..  .+...... .+++ .-++.+++.||.+      ..+..||..++
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~  416 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTN  416 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceEE-EECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence            45677777765     346778877653211  11111111 1122 2256666666632      34677777654

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=90.97  E-value=1.8  Score=42.47  Aligned_cols=40  Identities=25%  Similarity=0.314  Sum_probs=30.0

Q ss_pred             CcEEEEEEcC----CCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        293 NVVIAADWLS----DGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       293 ~~v~~i~~sp----~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                      ..+.++++++    +..++++.+.|+++|+||+.+++++.+..-
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~~  258 (547)
T PF11715_consen  215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATIDL  258 (547)
T ss_dssp             --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEET
T ss_pred             CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEecc
Confidence            3455566665    678999999999999999999999776643

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=90.73  E-value=1.8  Score=25.41  Aligned_cols=40  Identities=13%  Similarity=0.181  Sum_probs=28.8

Q ss_pred             CCCCEEEEEE-CCCcEEEEECCCCeEEEEEecCCCceEEEEE
Q psy11015        302 SDGEQVITAS-WDRVANLFDVETGTILQSLTEPGEAIRAAAG  342 (360)
Q Consensus       302 p~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~  342 (360)
                      |++++++++. .++.|.++|..++..+..+... ..-..++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg-~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG-GYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC-CCCceEEe
Confidence            5778776665 4789999999999888887753 33345554

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=90.48  E-value=14  Score=34.62  Aligned_cols=135  Identities=14%  Similarity=0.103  Sum_probs=62.6

Q ss_pred             CEEEEEECCCCCEEEEEeC--------------------CCcEEEEECCCCeEEEEEeCCC--cCeEEEEEeeC--CCE-
Q psy11015        182 GVWDVAVRPGQPVLGSASA--------------------DRTVRLWSTQTGKCVLQYSGHS--GSVNSVRFLPN--KDL-  236 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~--------------------Dg~v~iwd~~~~~~~~~~~~h~--~~v~~i~~~p~--~~~-  236 (360)
                      --+.+-|.|..+.++|..-                    ..++.+||+.+.+.++++.--.  ..+..|.|..+  ..+ 
T Consensus       182 ~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~g  261 (461)
T PF05694_consen  182 FGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYG  261 (461)
T ss_dssp             ----EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EE
T ss_pred             CCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccce
Confidence            3467778998888888742                    3589999999999999987322  34667888544  333 


Q ss_pred             EEEEeCCCcEEEEEc-ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CC
Q psy11015        237 VLSASGDKSVHIWQA-VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DR  314 (360)
Q Consensus       237 l~s~s~d~~i~vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg  314 (360)
                      |+.+....+|..|-- ..+.-.......      .+..... .......+..+..-..-|+.|.+|.|.++|...++ +|
T Consensus       262 Fvg~aLss~i~~~~k~~~g~W~a~kVi~------ip~~~v~-~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~G  334 (461)
T PF05694_consen  262 FVGCALSSSIWRFYKDDDGEWAAEKVID------IPAKKVE-GWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHG  334 (461)
T ss_dssp             EEEEE--EEEEEEEE-ETTEEEEEEEEE------E--EE---SS---GGGGGG-EE------EEE-TTS-EEEEEETTTT
T ss_pred             EEEEeccceEEEEEEcCCCCeeeeEEEE------CCCcccC-cccccccccccccCCCceEeEEEccCCCEEEEEcccCC
Confidence            333344445554432 222111100000      0000000 00000001111112356889999999999987776 89


Q ss_pred             cEEEEECCC
Q psy11015        315 VANLFDVET  323 (360)
Q Consensus       315 ~i~iwd~~~  323 (360)
                      .|+.||+..
T Consensus       335 dvrqYDISD  343 (461)
T PF05694_consen  335 DVRQYDISD  343 (461)
T ss_dssp             EEEEEE-SS
T ss_pred             cEEEEecCC
Confidence            999999874

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=90.38  E-value=14  Score=33.63  Aligned_cols=157  Identities=13%  Similarity=0.091  Sum_probs=85.6

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCc------EEEEECCC--C--eEE-----EEEeCCCc--------CeEEEEEeeCCCE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRT------VRLWSTQT--G--KCV-----LQYSGHSG--------SVNSVRFLPNKDL  236 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~------v~iwd~~~--~--~~~-----~~~~~h~~--------~v~~i~~~p~~~~  236 (360)
                      -+.+..+.+.+++..++..|.+|.      +..+++..  +  ..+     ..+..-.+        ...+|++.++|.+
T Consensus        19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~   98 (326)
T PF13449_consen   19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF   98 (326)
T ss_pred             cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence            356788888866667777777777      55555443  1  111     11111112        3447888778888


Q ss_pred             EEEEeCC------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE
Q psy11015        237 VLSASGD------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  310 (360)
Q Consensus       237 l~s~s~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg  310 (360)
                      +++.-.+      ..|..++.. |.....+..+.           .......  -..-........+++++|+|+.|+++
T Consensus        99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~-----------~~~~~~~--~~~~~~~N~G~E~la~~~dG~~l~~~  164 (326)
T PF13449_consen   99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPA-----------AFLPDAN--GTSGRRNNRGFEGLAVSPDGRTLFAA  164 (326)
T ss_pred             EEEeCCccCCCCCCEEEEECCC-CcccceEcccc-----------ccccccC--ccccccCCCCeEEEEECCCCCEEEEE
Confidence            8877667      677777755 32211110000           0000000  00112345678999999999977665


Q ss_pred             EC-----CC--c-------EEEE--ECCC-CeE----EEEEec-----CCCceEEEEEcCCCCEEE
Q psy11015        311 SW-----DR--V-------ANLF--DVET-GTI----LQSLTE-----PGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       311 s~-----dg--~-------i~iw--d~~~-~~~----~~~l~~-----h~~~v~~~~~~~~g~~la  350 (360)
                      ..     |+  .       ++++  |..+ +..    ...+..     ....|+.+++.+++.+++
T Consensus       165 ~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLv  230 (326)
T PF13449_consen  165 MESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLV  230 (326)
T ss_pred             ECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEE
Confidence            43     22  1       4554  4443 322    233332     356889999999998877

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=90.02  E-value=12  Score=38.24  Aligned_cols=69  Identities=13%  Similarity=0.096  Sum_probs=50.0

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC--------eEEEEEee----------------CCCEEEEEeCCCcEE
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS--------VNSVRFLP----------------NKDLVLSASGDKSVH  247 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~--------v~~i~~~p----------------~~~~l~s~s~d~~i~  247 (360)
                      +..++.++.++.|.-.|..+|+.+..+......        .+.+.+..                ++..++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            557888888999999999999988887632211        12233321                234788889999999


Q ss_pred             EEEcccCeeEeee
Q psy11015        248 IWQAVINWECLVS  260 (360)
Q Consensus       248 vwd~~~~~~~~~~  260 (360)
                      -.|..+|..+...
T Consensus       274 ALDA~TGk~~W~f  286 (764)
T TIGR03074       274 ALDADTGKLCEDF  286 (764)
T ss_pred             EEECCCCCEEEEe
Confidence            9999999887653

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>KOG4441|consensus

Probab=89.91  E-value=8.8  Score=37.88  Aligned_cols=134  Identities=16%  Similarity=0.127  Sum_probs=67.9

Q ss_pred             CCCEEEEEeCCCc-----EEEEECCCCe--EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc------EEEEEcccCeeE
Q psy11015        191 GQPVLGSASADRT-----VRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS------VHIWQAVINWEC  257 (360)
Q Consensus       191 ~~~~l~sgs~Dg~-----v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~------i~vwd~~~~~~~  257 (360)
                      +|...+.||.||.     |-.||..+.+  .+..........-.+.+  +|.+.+.||.++.      +..||..++.  
T Consensus       380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~--~g~iYi~GG~~~~~~~l~sve~YDP~t~~--  455 (571)
T KOG4441|consen  380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVL--GGKLYIIGGGDGSSNCLNSVECYDPETNT--  455 (571)
T ss_pred             CCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEE--CCEEEEEcCcCCCccccceEEEEcCCCCc--
Confidence            4667888888864     6667776543  22222211112222223  6777888886653      5567766552  


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCc-----EEEEECCCCeEEEE--E
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV-----ANLFDVETGTILQS--L  330 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~-----i~iwd~~~~~~~~~--l  330 (360)
                                              |+.+..+..-......+.+  ++...+.||.||.     +..||..+.+....  +
T Consensus       456 ------------------------W~~~~~M~~~R~~~g~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m  509 (571)
T KOG4441|consen  456 ------------------------WTLIAPMNTRRSGFGVAVL--NGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPM  509 (571)
T ss_pred             ------------------------eeecCCcccccccceEEEE--CCEEEEECCccCCCccceEEEEcCCCCceeEcccC
Confidence                                    2222222111111112333  6777788887763     77788887665433  2


Q ss_pred             ecCCCceEEEEEcCCCCEEEccccc
Q psy11015        331 TEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      ...... ..++...+..+++.+.++
T Consensus       510 ~~~rs~-~g~~~~~~~ly~vGG~~~  533 (571)
T KOG4441|consen  510 TSPRSA-VGVVVLGGKLYAVGGFDG  533 (571)
T ss_pred             cccccc-ccEEEECCEEEEEecccC
Confidence            222222 223334344455555444

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=89.90  E-value=7.4  Score=31.68  Aligned_cols=30  Identities=17%  Similarity=0.311  Sum_probs=25.0

Q ss_pred             CcEEEEEEcCCC------CEEEEEECCCcEEEEECC
Q psy11015        293 NVVIAADWLSDG------EQVITASWDRVANLFDVE  322 (360)
Q Consensus       293 ~~v~~i~~sp~g------~~l~tgs~dg~i~iwd~~  322 (360)
                      ..|.+++|||.|      -.|++.+.+|.|.||...
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~  121 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP  121 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence            378999999944      367888999999999866

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=89.79  E-value=7  Score=36.66  Aligned_cols=41  Identities=10%  Similarity=0.044  Sum_probs=33.3

Q ss_pred             EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       214 ~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      +...+......+.+|+.+|++++.++...=|.|.++|+.++
T Consensus       299 ~r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~  339 (415)
T PF14655_consen  299 MRFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARG  339 (415)
T ss_pred             eEEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence            34455556667899999999998888877799999999876

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=89.72  E-value=9.7  Score=34.68  Aligned_cols=50  Identities=14%  Similarity=0.233  Sum_probs=34.1

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE---EEEE----eCCCcCeEEEEEeeC
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC---VLQY----SGHSGSVNSVRFLPN  233 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~---~~~~----~~h~~~v~~i~~~p~  233 (360)
                      .-++|+|.|++.++++ -..|.|++++ ..+..   +..+    .........++++|+
T Consensus         3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~   59 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD   59 (331)
T ss_dssp             SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred             CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence            3578999999877665 5599999999 44443   3333    123456899999994

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=89.69  E-value=13  Score=32.42  Aligned_cols=128  Identities=10%  Similarity=0.056  Sum_probs=76.7

Q ss_pred             EEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCC
Q psy11015        197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDE  276 (360)
Q Consensus       197 sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (360)
                      -.-.++...+||..+-+.+..+. ..+.=+.++.  ++..|+.+.+...+.++|..+-.....                 
T Consensus       105 LTWk~~~~f~yd~~tl~~~~~~~-y~~EGWGLt~--dg~~Li~SDGS~~L~~~dP~~f~~~~~-----------------  164 (264)
T PF05096_consen  105 LTWKEGTGFVYDPNTLKKIGTFP-YPGEGWGLTS--DGKRLIMSDGSSRLYFLDPETFKEVRT-----------------  164 (264)
T ss_dssp             EESSSSEEEEEETTTTEEEEEEE--SSS--EEEE--CSSCEEEE-SSSEEEEE-TTT-SEEEE-----------------
T ss_pred             EEecCCeEEEEccccceEEEEEe-cCCcceEEEc--CCCEEEEECCccceEEECCcccceEEE-----------------
Confidence            33456788999999999888886 4566677774  777888888888899999765422211                 


Q ss_pred             CccccccceeEee-C-CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec------------C---CCceEE
Q psy11015        277 SSITLRTPVKELL-G-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE------------P---GEAIRA  339 (360)
Q Consensus       277 ~~~~~~~~~~~~~-~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~------------h---~~~v~~  339 (360)
                              +.... + --..++.+-|- +|...|=.=....|...|..+|+.+..+.-            +   ..-.+.
T Consensus       165 --------i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNG  235 (264)
T PF05096_consen  165 --------IQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNG  235 (264)
T ss_dssp             --------EE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEE
T ss_pred             --------EEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEe
Confidence                    11111 0 01234556664 454444444556677888899988776631            0   245789


Q ss_pred             EEEcCCC-CEEEccc
Q psy11015        340 AAGRTGG-PIRASPL  353 (360)
Q Consensus       340 ~~~~~~g-~~las~~  353 (360)
                      +||+|.+ .+++||-
T Consensus       236 IAyd~~~~~l~vTGK  250 (264)
T PF05096_consen  236 IAYDPETDRLFVTGK  250 (264)
T ss_dssp             EEEETTTTEEEEEET
T ss_pred             EeEeCCCCEEEEEeC
Confidence            9998754 5777764

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=89.62  E-value=9.2  Score=33.86  Aligned_cols=53  Identities=15%  Similarity=0.290  Sum_probs=38.6

Q ss_pred             CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe------CCCcEEEEEcccC
Q psy11015        202 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS------GDKSVHIWQAVIN  254 (360)
Q Consensus       202 g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s------~d~~i~vwd~~~~  254 (360)
                      ..|++||..+.+-..--.+-.+.|+++.|..+.+++++|.      ....+..||..+.
T Consensus        16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~   74 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ   74 (281)
T ss_pred             CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC
Confidence            4688999887665555555678899999986666777664      3456788887765

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=89.15  E-value=9.2  Score=35.38  Aligned_cols=66  Identities=23%  Similarity=0.256  Sum_probs=37.4

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----eE--E-EEEeC----CCcCeEEEEEeeCCCEEEEEe
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----KC--V-LQYSG----HSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-----~~--~-~~~~~----h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      ..|...-.....+++.+++ +++ ++.+...++.|....     +.  + ..+..    +......++|.|+|.+.++-+
T Consensus        65 ~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        65 NVFAEELSMVTGLAVAVGG-VYV-ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             EEeecCCCCccceeEecCC-EEE-eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            3444444456889999888 444 444444444455321     21  1 12322    234578899999998766554

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG2280|consensus

Probab=88.43  E-value=11  Score=37.52  Aligned_cols=160  Identities=9%  Similarity=-0.011  Sum_probs=82.3

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE----eCCCcCeEEEEEeeCCCEEEEEeCC
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY----SGHSGSVNSVRFLPNKDLVLSASGD  243 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~----~~h~~~v~~i~~~p~~~~l~s~s~d  243 (360)
                      .+|+++.++....+.+-.+.|+.+. .|+....||+|+||++-. ..+..+    ......|..+.|..+|=.++  ..+
T Consensus        71 ~sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~g-e~ie~~svg~e~~~~~I~ec~~f~~GVavl--t~~  146 (829)
T KOG2280|consen   71 ISGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLG-EFIESNSVGFESQMSDIVECRFFHNGVAVL--TVS  146 (829)
T ss_pred             ccccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecch-hhhcccccccccccCceeEEEEecCceEEE--ecC
Confidence            4567777777666789999999876 677788999999999852 222221    11223355555544553333  334


Q ss_pred             CcEEEE-EcccCee--EeeeCCCCCCCCCCCCCCC----CCccccc--------------cceeEeeCCCCcEEEEEEcC
Q psy11015        244 KSVHIW-QAVINWE--CLVSNNDNDSDLDESKEPD----ESSITLR--------------TPVKELLGHSNVVIAADWLS  302 (360)
Q Consensus       244 ~~i~vw-d~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~--------------~~~~~~~~h~~~v~~i~~sp  302 (360)
                      |.+.+- +....+.  ....+........+.....    .......              .....+....+.+..+..||
T Consensus       147 g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~  226 (829)
T KOG2280|consen  147 GQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPNSSVVKISVSP  226 (829)
T ss_pred             CcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCCceEEEEEEcC
Confidence            444332 2211100  0000000000000000000    0000000              00111111234677888999


Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      ++++|+-=..+|.+.+-+....+++-.+.
T Consensus       227 n~~~laLyt~~G~i~~vs~D~~~~lce~~  255 (829)
T KOG2280|consen  227 NRRFLALYTETGKIWVVSIDLSQILCEFN  255 (829)
T ss_pred             CcceEEEEecCCcEEEEecchhhhhhccC
Confidence            99999988889999888877665554443

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=87.94  E-value=3.2  Score=24.07  Aligned_cols=30  Identities=13%  Similarity=0.317  Sum_probs=20.0

Q ss_pred             CCCCcEEEEEEcCCCCEEE-EEECC--CcEEEE
Q psy11015        290 GHSNVVIAADWLSDGEQVI-TASWD--RVANLF  319 (360)
Q Consensus       290 ~h~~~v~~i~~sp~g~~l~-tgs~d--g~i~iw  319 (360)
                      -....-...+|+|||++|+ ++..+  |.-.||
T Consensus         6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            3445677899999999875 44555  666666

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PHA03098 kelch-like protein; Provisional

Probab=87.85  E-value=8.8  Score=37.50  Aligned_cols=62  Identities=10%  Similarity=0.023  Sum_probs=31.4

Q ss_pred             CCCEEEEEeCCC------cEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCCC-----cEEEEEcccC
Q psy11015        191 GQPVLGSASADR------TVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~Dg------~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d~-----~i~vwd~~~~  254 (360)
                      ++..++.||.++      .+..||..+......  +.........+.  -++.+++.||.++     .+..||..++
T Consensus       294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~  368 (534)
T PHA03098        294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGES  368 (534)
T ss_pred             CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCC
Confidence            355677776543      467788776643221  110111112222  2667777777653     3556665543

>PHA02790 Kelch-like protein; Provisional

Probab=87.55  E-value=27  Score=33.71  Aligned_cols=62  Identities=5%  Similarity=-0.004  Sum_probs=32.2

Q ss_pred             CCCEEEEEeCC--CcEEEEECCCCeE--EEEEeCCCcCeEEEEEeeCCCEEEEEeCCC---cEEEEEcccC
Q psy11015        191 GQPVLGSASAD--RTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASGDK---SVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~D--g~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~---~i~vwd~~~~  254 (360)
                      ++.+.+.||.+  .++..||..++.-  +..+.........+.  -+|.+.+.||.++   .+-.||..++
T Consensus       318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~~  386 (480)
T PHA02790        318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVAS--INNVIYVIGGHSETDTTTEYLLPNHD  386 (480)
T ss_pred             CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEE--ECCEEEEecCcCCCCccEEEEeCCCC
Confidence            46677777764  3577788765432  112211111111222  2677777777654   3556776554

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=87.50  E-value=11  Score=34.11  Aligned_cols=109  Identities=14%  Similarity=0.181  Sum_probs=66.5

Q ss_pred             CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC----------CCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015        202 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG----------DKSVHIWQAVINWECLVSNNDNDSDLDES  271 (360)
Q Consensus       202 g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~----------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  271 (360)
                      +.|.|+|.++++.+..+.+  +..-.+..+|+++.+++++.          .-.|.+||..+-.....+..+.       
T Consensus        17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~-------   87 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPP-------   87 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETT-------
T ss_pred             ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCC-------
Confidence            4799999999998888763  34455778999998876432          2347899988764433211110       


Q ss_pred             CCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEEecC
Q psy11015        272 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSLTEP  333 (360)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l~~h  333 (360)
                                 .+.. +..  .....++++.+|++++....  --.|.|.|+..++.+.++..+
T Consensus        88 -----------k~R~-~~~--~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P  137 (342)
T PF06433_consen   88 -----------KPRA-QVV--PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP  137 (342)
T ss_dssp             -----------S-B---BS----GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT
T ss_pred             -----------cchh-eec--ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC
Confidence                       0011 111  12223577888888776533  456888999888887777644

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG4499|consensus

Probab=87.32  E-value=16  Score=31.19  Aligned_cols=105  Identities=10%  Similarity=0.037  Sum_probs=66.2

Q ss_pred             ceeeeeeeecCCCC--------EEEEEECCCCC-EEEEEeCCCcEEEEE--CCCCe-----EEEEEeCC----CcCeEEE
Q psy11015        169 SCYKIRSFSGHRDG--------VWDVAVRPGQP-VLGSASADRTVRLWS--TQTGK-----CVLQYSGH----SGSVNSV  228 (360)
Q Consensus       169 ~~~~~~~l~~h~~~--------V~~l~~~~~~~-~l~sgs~Dg~v~iwd--~~~~~-----~~~~~~~h----~~~v~~i  228 (360)
                      .|.+..-+.+|.-.        -+.++|+.+.+ +.++-+.+-+|.-||  ..+|.     .+..++..    .-..-.+
T Consensus       138 ~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm  217 (310)
T KOG4499|consen  138 GGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGM  217 (310)
T ss_pred             ccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcc
Confidence            34455555666432        25677887766 555667788888888  55552     22223211    1112234


Q ss_pred             EEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       229 ~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      +...+|.+.+++-..++|.-.|..+|.                            .+.++.--...|++++|-
T Consensus       218 ~ID~eG~L~Va~~ng~~V~~~dp~tGK----------------------------~L~eiklPt~qitsccFg  262 (310)
T KOG4499|consen  218 TIDTEGNLYVATFNGGTVQKVDPTTGK----------------------------ILLEIKLPTPQITSCCFG  262 (310)
T ss_pred             eEccCCcEEEEEecCcEEEEECCCCCc----------------------------EEEEEEcCCCceEEEEec
Confidence            455578888888888899999988773                            345555557889999994

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=87.11  E-value=9  Score=37.01  Aligned_cols=68  Identities=13%  Similarity=0.082  Sum_probs=47.6

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc------CeE--EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSG------SVN--SVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~------~v~--~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      +..++.++.++.|...|..+|+.+..+.....      .+.  .+... ++..++.++.++.|.-+|..+|......
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~  136 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKF  136 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeee
Confidence            44677888899999999999988777653322      000  11111 2267888889999999999999776653

The alignment model contains an 8-bladed beta-propeller.

>PRK13684 Ycf48-like protein; Provisional

Probab=86.87  E-value=24  Score=32.14  Aligned_cols=105  Identities=19%  Similarity=0.123  Sum_probs=60.4

Q ss_pred             CcCeEEEEEeeCCCEEEEEeCCCcEE-EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE
Q psy11015        222 SGSVNSVRFLPNKDLVLSASGDKSVH-IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW  300 (360)
Q Consensus       222 ~~~v~~i~~~p~~~~l~s~s~d~~i~-vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~  300 (360)
                      .+.+.++.+.|++.+++++ ..|.+. .+|  .+..                        .+..+  ..+-...++++.+
T Consensus       172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~--~gg~------------------------tW~~~--~~~~~~~l~~i~~  222 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWE--PGQT------------------------AWTPH--QRNSSRRLQSMGF  222 (334)
T ss_pred             cceEEEEEECCCCeEEEEe-CCceEEEEcC--CCCC------------------------eEEEe--eCCCcccceeeeE
Confidence            4578899999988766555 444433 222  1100                        11111  1123457889999


Q ss_pred             cCCCCEEEEEECCCcEEEEECCCCeEEEEEec----CCCceEEEEEcCCCCEEEcccccc
Q psy11015        301 LSDGEQVITASWDRVANLFDVETGTILQSLTE----PGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~----h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      .|+++.++.| ..|.+.+=....|..-.....    ....+.++++.|++.+++.+..+.
T Consensus       223 ~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G~~G~  281 (334)
T PRK13684        223 QPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGGGNGT  281 (334)
T ss_pred             cCCCCEEEEe-cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEEcCCCe
Confidence            9998877665 457665333344432222111    123578899999888888777654

>PHA02790 Kelch-like protein; Provisional

Probab=85.87  E-value=24  Score=33.97  Aligned_cols=24  Identities=8%  Similarity=0.220  Sum_probs=15.7

Q ss_pred             CCCEEEEEECC-----CcEEEEECCCCeE
Q psy11015        303 DGEQVITASWD-----RVANLFDVETGTI  326 (360)
Q Consensus       303 ~g~~l~tgs~d-----g~i~iwd~~~~~~  326 (360)
                      +|+..+.||.+     ..+..||..+.+.
T Consensus       446 ~~~IYviGG~~~~~~~~~ve~Yd~~~~~W  474 (480)
T PHA02790        446 DNKLLLIGGFYRGSYIDTIEVYNNRTYSW  474 (480)
T ss_pred             CCEEEEECCcCCCcccceEEEEECCCCeE
Confidence            67777777754     3466777766654

>KOG4460|consensus

Probab=85.74  E-value=8  Score=36.87  Aligned_cols=28  Identities=11%  Similarity=0.050  Sum_probs=21.6

Q ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEE
Q psy11015        181 DGVWDVAVRPGQPVLGSASADRTVRLWS  208 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd  208 (360)
                      -.|..+..++.|..++-+|.+|.+.++=
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeL  131 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMEL  131 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEc
Confidence            3467777889999888888888776644

>KOG3616|consensus

Probab=85.59  E-value=3.9  Score=40.58  Aligned_cols=68  Identities=13%  Similarity=0.228  Sum_probs=48.3

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      ...++++..+|.+..+++|+.||.|++|+..+.+....+. ...+-..+.|...|  +++...|+.+.-|.
T Consensus        14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~-~~~p~~nlv~tnhg--l~~~tsdrr~la~~   81 (1636)
T KOG3616|consen   14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICE-EAKPKENLVFTNHG--LVTATSDRRALAWK   81 (1636)
T ss_pred             cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhh-hcCCccceeeeccc--eEEEeccchhheee
Confidence            3457788899999999999999999999987654422222 23344455564333  67777888888885

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=85.26  E-value=5.5  Score=23.24  Aligned_cols=40  Identities=25%  Similarity=0.199  Sum_probs=26.8

Q ss_pred             CCCCEEEE-EeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015        190 PGQPVLGS-ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       190 ~~~~~l~s-gs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~  230 (360)
                      |+++.|+. ...+++|.++|..++..+..+.. ......+.|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEe
Confidence            45665555 44578999999998888887764 233445544

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=84.99  E-value=16  Score=33.19  Aligned_cols=110  Identities=11%  Similarity=0.044  Sum_probs=56.5

Q ss_pred             CeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC
Q psy11015        224 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  303 (360)
Q Consensus       224 ~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~  303 (360)
                      ..++|+|.|+|+++++ ...|.|++++ ..+......                     ................++++|+
T Consensus         3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v---------------------~~~~~v~~~~~~gllgia~~p~   59 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPV---------------------ADLPEVFADGERGLLGIAFHPD   59 (331)
T ss_dssp             SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEE---------------------EE-TTTBTSTTBSEEEEEE-TT
T ss_pred             CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCccee---------------------cccccccccccCCcccceeccc
Confidence            3579999999987765 5699999998 333220000                     0000112234557889999984


Q ss_pred             ---CCEEEEEEC-C--------CcEEEEECCCC-------eE-EEEEec---CCCceEEEEEcCCCCEEEcccccc
Q psy11015        304 ---GEQVITASW-D--------RVANLFDVETG-------TI-LQSLTE---PGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       304 ---g~~l~tgs~-d--------g~i~iwd~~~~-------~~-~~~l~~---h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                         ..+|..... .        ..|.-|....+       +. +..+..   ..+....++|.|+|.+.++..+..
T Consensus        60 f~~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~  135 (331)
T PF07995_consen   60 FASNGYLYVYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG  135 (331)
T ss_dssp             CCCC-EEEEEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred             cCCCCEEEEEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence               234433322 1        12333333222       11 112222   234557799999998777665543

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=84.45  E-value=2.6  Score=41.37  Aligned_cols=39  Identities=31%  Similarity=0.516  Sum_probs=29.3

Q ss_pred             CCEEEEEECC----CCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q psy11015        181 DGVWDVAVRP----GQPVLGSASADRTVRLWSTQTGKCVLQYS  219 (360)
Q Consensus       181 ~~V~~l~~~~----~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~  219 (360)
                      +.+.++++++    +..++++.+.|+++|+||+.++.++.+..
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~  257 (547)
T PF11715_consen  215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATID  257 (547)
T ss_dssp             --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred             CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence            3455666666    66799999999999999999999976653

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=84.26  E-value=24  Score=34.44  Aligned_cols=66  Identities=17%  Similarity=0.105  Sum_probs=46.6

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-cCeE----------EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVN----------SVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-~~v~----------~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      +..++.++.++.|.-.|..+|+.+..+.... ..+.          .+++  .+..++.++.|+.+.-.|..+|+.+..
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~  145 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWS  145 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEee
Confidence            4578888888999999999999887765321 1111          1222  234677788899999999999977654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=83.56  E-value=42  Score=32.02  Aligned_cols=60  Identities=12%  Similarity=0.218  Sum_probs=41.0

Q ss_pred             eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEEEe-----CCCcCeEEEEEeeCC
Q psy11015        175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYS-----GHSGSVNSVRFLPNK  234 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~-----~h~~~v~~i~~~p~~  234 (360)
                      .+...-..-+.|+|.|++.+|++--..|.|++++..++.  .+..+.     ...+....|+++|+-
T Consensus        24 ~va~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        24 VLLSGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF   90 (454)
T ss_pred             EEECCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence            344445677999999999877776657999999865543  221111     125678999999874

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>KOG3630|consensus

Probab=82.90  E-value=2.3  Score=44.02  Aligned_cols=69  Identities=14%  Similarity=0.129  Sum_probs=51.5

Q ss_pred             CEEEEEECCCCC-EEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        182 GVWDVAVRPGQP-VLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       182 ~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      -..++.|+|.-. ..+.+..|+.|+|..+... ..+..+. ....+++++|+|.|..++.|-..|++.-|..
T Consensus       157 f~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P  227 (1405)
T KOG3630|consen  157 FQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP  227 (1405)
T ss_pred             ccccccccCCccchhhhhccccchhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeec
Confidence            356777988654 5667788899988877533 2223333 5667899999999999999999999988854

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=82.32  E-value=11  Score=34.15  Aligned_cols=55  Identities=16%  Similarity=0.258  Sum_probs=41.0

Q ss_pred             cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEE-eCCCcEEEEEcccCeeEe
Q psy11015        203 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSA-SGDKSVHIWQAVINWECL  258 (360)
Q Consensus       203 ~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~-s~d~~i~vwd~~~~~~~~  258 (360)
                      .|.++|+.+++.+..+.. ...+.+|..+.+.. +|++. ..++.+.+||..+|....
T Consensus       270 eVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~  326 (342)
T PF06433_consen  270 EVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVR  326 (342)
T ss_dssp             EEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEE
T ss_pred             EEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEe
Confidence            478889999999998873 34678999998765 55554 457899999999885443

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG2377|consensus

Probab=81.95  E-value=31  Score=32.55  Aligned_cols=101  Identities=7%  Similarity=0.128  Sum_probs=64.6

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE----EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL----QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~----~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~  253 (360)
                      ..+|+|.++.|++|.+.+|.--.|.+|-+++....+...    +.+..+..|....|... .-++-.+..| +-+|.+..
T Consensus        64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~p  141 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLP  141 (657)
T ss_pred             cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEch
Confidence            346799999999999999999999999999985443322    22334456888888754 3344433333 45554321


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV  307 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l  307 (360)
                      .                           ...+.....|...|.-..|.++-+.+
T Consensus       142 e---------------------------krslRlVks~~~nvnWy~yc~et~v~  168 (657)
T KOG2377|consen  142 E---------------------------KRSLRLVKSHNLNVNWYMYCPETAVI  168 (657)
T ss_pred             h---------------------------hhhhhhhhhcccCccEEEEccccceE
Confidence            1                           11233344566667777777776654

>PRK10115 protease 2; Provisional

Probab=81.94  E-value=34  Score=34.70  Aligned_cols=97  Identities=8%  Similarity=-0.036  Sum_probs=53.3

Q ss_pred             CeEEEEEeeCCCEEEEEe-CCC----cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEE
Q psy11015        224 SVNSVRFLPNKDLVLSAS-GDK----SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA  298 (360)
Q Consensus       224 ~v~~i~~~p~~~~l~s~s-~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i  298 (360)
                      .+..+.|+|+|++|+-+. .+|    .+++.|+.++..+                           ...+. ...  ..+
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l---------------------------~~~i~-~~~--~~~  177 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWY---------------------------PELLD-NVE--PSF  177 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCC---------------------------Ccccc-Ccc--eEE
Confidence            466788999999776542 222    4777787665211                           01111 111  458


Q ss_pred             EEcCCCCEEEEEECC------CcEEEEECCCC--eEEEEEecCCCceE-EEEEcCCCCEEE
Q psy11015        299 DWLSDGEQVITASWD------RVANLFDVETG--TILQSLTEPGEAIR-AAAGRTGGPIRA  350 (360)
Q Consensus       299 ~~sp~g~~l~tgs~d------g~i~iwd~~~~--~~~~~l~~h~~~v~-~~~~~~~g~~la  350 (360)
                      +|.+|++.|+-...+      ..|..+++.++  +....+........ .+..+.++.+++
T Consensus       178 ~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~  238 (686)
T PRK10115        178 VWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVV  238 (686)
T ss_pred             EEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEE
Confidence            999999876544332      35777888877  33333433223333 223343666554

>KOG1897|consensus

Probab=81.89  E-value=52  Score=34.17  Aligned_cols=142  Identities=11%  Similarity=0.092  Sum_probs=86.0

Q ss_pred             EEEEEECCC-CCEEEEEeC----------CCcEEEEECCCCeEEEEEeC--CCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        183 VWDVAVRPG-QPVLGSASA----------DRTVRLWSTQTGKCVLQYSG--HSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       183 V~~l~~~~~-~~~l~sgs~----------Dg~v~iwd~~~~~~~~~~~~--h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      |.++.|..| +.+++.|..          .|.|.||.+..+..+.....  -.+.|.++..- +|+++|  +-...|++|
T Consensus       777 i~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA--~In~~vrLy  853 (1096)
T KOG1897|consen  777 IISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLA--GINQSVRLY  853 (1096)
T ss_pred             eeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEE--ecCcEEEEE
Confidence            344457666 456666642          36677777665333332221  23555555543 566554  455679999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC--CCCeEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV--ETGTIL  327 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~--~~~~~~  327 (360)
                      +..+.+                            .++.-..|..++..+...-.|+.++.|..=+.+.+.-.  ..|..+
T Consensus       854 e~t~~~----------------------------eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~  905 (1096)
T KOG1897|consen  854 EWTTER----------------------------ELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFE  905 (1096)
T ss_pred             Eccccc----------------------------eehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceE
Confidence            876552                            23333456677888888889999999988777665544  444455


Q ss_pred             EEEe-cCCCceEEEEEcCCCCEEEccccc
Q psy11015        328 QSLT-EPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       328 ~~l~-~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      ...+ .+...++++.+-.+..++.+-..+
T Consensus       906 evArD~~p~Wmtaveil~~d~ylgae~~g  934 (1096)
T KOG1897|consen  906 EVARDYNPNWMTAVEILDDDTYLGAENSG  934 (1096)
T ss_pred             EeehhhCccceeeEEEecCceEEeecccc
Confidence            4443 366788888887666666554443

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=81.41  E-value=29  Score=32.13  Aligned_cols=116  Identities=10%  Similarity=0.059  Sum_probs=56.5

Q ss_pred             ECCCCeEEEEEeCCCcCeEEE-----EEeeCCCEE-EEEeCCCc--EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcc
Q psy11015        208 STQTGKCVLQYSGHSGSVNSV-----RFLPNKDLV-LSASGDKS--VHIWQAVINWECLVSNNDNDSDLDESKEPDESSI  279 (360)
Q Consensus       208 d~~~~~~~~~~~~h~~~v~~i-----~~~p~~~~l-~s~s~d~~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (360)
                      |..||..+..+....+.-..+     +|.++|+.| +++..||.  +.+.|+.++                         
T Consensus        16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~-------------------------   70 (386)
T PF14583_consen   16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATG-------------------------   70 (386)
T ss_dssp             -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT--------------------------
T ss_pred             CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccC-------------------------
Confidence            667777777776444333323     456688655 44555654  666677766                         


Q ss_pred             ccccceeEeeCCCC-cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEE--cCCCCEEEcc
Q psy11015        280 TLRTPVKELLGHSN-VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAG--RTGGPIRASP  352 (360)
Q Consensus       280 ~~~~~~~~~~~h~~-~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~--~~~g~~las~  352 (360)
                          .+..|+.+.+ ......++|+++.++=...+..|+-.|+.+.+.-..+..+..-+-...|  +.++..++..
T Consensus        71 ----~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~  142 (386)
T PF14583_consen   71 ----EITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGI  142 (386)
T ss_dssp             ----EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEE
T ss_pred             ----EEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEE
Confidence                2334443321 1224567788888765556678999999998765555556655544555  4467766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	360
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		3e-14
2gnq_A	336	Structure Of Wdr5 Length = 336		3e-14
2h9l_A	329	Wdr5delta23 Length = 329		4e-14
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		5e-14
2g99_A	308	Structural Basis For The Specific Recognition Of Me		5e-14
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		5e-14
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		5e-14
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		5e-14
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		5e-14
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		5e-14
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		5e-14
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		6e-14
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		6e-14
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		6e-14
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		6e-14
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		6e-14
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		7e-14
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		3e-13
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		1e-12
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		3e-10
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		3e-08
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		5e-08
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		5e-08
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		7e-04
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		5e-08
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		1e-07
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		6e-04
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		1e-07
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		6e-04
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-07
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		6e-04
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		1e-07
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		6e-04
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		2e-07
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		7e-04
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-07
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		3e-07
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		8e-04
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		5e-07
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		3e-06
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		3e-06
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		3e-06
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		3e-06
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		4e-06
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		4e-06
3jpx_A	402	Eed: A Novel Histone Trimethyllysine Binder Within		6e-06
3jzn_A	366	Structure Of Eed In Apo Form Length = 366		7e-06
3iiw_A	365	Crystal Structure Of Eed In Complex With A Trimethy		7e-06
3iiy_A	365	Crystal Structure Of Eed In Complex With A Trimethy		8e-06
2qxv_A	361	Structural Basis Of Ezh2 Recognition By Eed Length		8e-06
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		1e-05
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		1e-05
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		2e-05
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		2e-04
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		3e-05
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		2e-04
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		5e-05
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		5e-05
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		8e-05
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		8e-05
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		9e-05
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		9e-05
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		9e-05
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		2e-04
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		3e-04
2aq5_A	402	Crystal Structure Of Murine Coronin-1 Length = 402		5e-04
2b4e_A	402	Crystal Structure Of Murine Coronin-1: Monoclinic F		6e-04

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 301 TDVVISTACHPTENIIASAAL 321

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 124 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 183
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 184 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 242
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 243 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 302
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 303 TDVVISTACHPTENIIASAAL 323

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 117 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 176
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 177 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 235
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 236 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 295
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 296 TDVVISTACHPTENIIASAAL 316

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 162
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 221
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 222 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 281
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 282 TDVVISTACHPTENIIASAAL 302

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 96  LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 155
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 156 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 214
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 215 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 274
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 275 TDVVISTACHPTENIIASAAL 295

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 106 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 165
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 166 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 224
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 225 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 284
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 285 TDVVISTACHPTENIIASAAL 305

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 162
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 221
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 222 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 281
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 282 TDVVISTACHPTENIIASAAL 302

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 100 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 159
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 160 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 218
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 219 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 278
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 279 TDVVISTACHPTENIIASAAL 299

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 101 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 160
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 161 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 219
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 220 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 279
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 280 TDVVISTACHPTENIIASAAL 300

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 106 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 165
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 166 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 224
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 225 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 284
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 285 TDVVISTACHPTENIIASAAL 305

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 106 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 165
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 166 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 224
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 225 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 284
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 285 TDVVISTACHPTENIIASAAL 305

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 100 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 159
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 160 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 218
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 219 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 278
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 279 TDVVISTACHPTENIIASAAL 299

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 105 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 164
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 165 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 223
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 224 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 283
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 284 TDVVISTACHPTENIIASAAL 304

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TG C+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNR 162
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNDLKL 221
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 222 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGH 281
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 282 TDVVISTACHPTENIIASAAL 302

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TG C+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNR 162
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 221
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 222 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGH 281
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 282 TDVVISTACHPTENIIASAAL 302

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 99  LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 158
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 159 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 217
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 218 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 277
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 278 TDVVISTACHPTENIIASAAL 298

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++  GH + V+     P   ++ S S D +VR+W  +TGKC+     HS  V++V F  
Sbjct: 103 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 162
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL--VXXXXXXXXXXXXKEPDESSITLRT------- 283
           +  L++S+S D    IW      +CL  +              P+   I   T       
Sbjct: 163 DGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 221
Query: 284 -------PVKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
                   +K   GH N    + A   ++ G+ +++ S D +  +++++T  I+Q L   
Sbjct: 222 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 281
Query: 334 GEAIRAAAGRTGGPIRASPLL 354
            + + + A      I AS  L
Sbjct: 282 TDVVISTACHPTENIIASAAL 302

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++ +GH   VW VA  P    + SAS D+TV+LW+ + G+ +   +GHS SV  V F P
Sbjct: 337 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSP 395
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPDESSITLRTP------- 284
           +   + SAS DK+V +W    N + L                PD+ +I   +        
Sbjct: 396 DGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLW 453
Query: 285 ------VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
                 ++ L GHS+ V    +  DG+ + +AS D+   L++   G +LQ+LT    ++R
Sbjct: 454 NRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVR 512
Query: 339 AAA 341
             A
Sbjct: 513 GVA 515

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
           R+  GH D V D++      +L S SAD T++LW  Q  +C+    GH  +V+SV  +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN 203
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSI--------TLRTPV 285
            D ++SAS DK++ +W+    + C+             +   + ++        T+R  V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 286 -------KELLGHSNVVIAADWLSD--------------------GEQVITASWDRVANL 318
                   EL  H +VV    W  +                    G  +++ S D+   +
Sbjct: 263 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Query: 319 FDVETGTILQSLTEPGEAIRAAAGRTGG 346
           +DV TG  L +L      +R     +GG
Sbjct: 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGG 350

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +R+  GH  GVW   +R    ++ S S DRT+++W+ +TG+C+    GH+ +V  +    
Sbjct: 152 LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 209
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT------------ 280
            +  V+S S D ++ +W      +CL             +      ++            
Sbjct: 210 KR--VVSGSRDATLRVWDIETG-QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 266
Query: 281 -LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
              T +  L GH+N V +  +  DG  V++ S D    ++DVETG  + +LT
Sbjct: 267 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 316

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 28/151 (18%)
Query: 186 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 245
           V   P    L + + DR +R+W  +  K V+   GH   + S+ + P+ D ++S SGD++
Sbjct: 129 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 188
Query: 246 VHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE 305
           V IW                          + S+TL            V   A    DG+
Sbjct: 189 VRIWDL---------------------RTGQCSLTLSI-------EDGVTTVAVSPGDGK 220
Query: 306 QVITASWDRVANLFDVETGTILQSLTEPGEA 336
            +   S DR   ++D ETG +++ L    E+
Sbjct: 221 YIAAGSLDRAVRVWDSETGFLVERLDSENES 251

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS 227
           + C  I   SGH D ++       +    SAS D T+R+W  + G+ +    GH+  V  
Sbjct: 300 MKCLYI--LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGL 357
Query: 228 VRFLPNKDLVLSASGDKSVHIWQA 251
           +R L +K LV SA+ D S+  W A
Sbjct: 358 LR-LSDKFLV-SAAADGSIRGWDA 379

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 8/138 (5%)
Query: 119 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRS-FS 177
           +D ECVT +  + N+ K +A  PS   L T ++      K V  ++      Y+  S  +
Sbjct: 93  DDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-----DKSVWVWEVDEEDEYECVSVLN 147
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKD 235
            H   V  V   P Q +L SAS D TV+L+  +     C     GH  +V S+ F P+  
Sbjct: 148 SHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ 207
Query: 236 LVLSASGDKSVHIWQAVI 253
            + S S D++V IW+  +
Sbjct: 208 RLASCSDDRTVRIWRQYL 225

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 29/143 (20%)
Query: 183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ---YSGHSGSVNSVRFLPNKDLVLS 239
            W +A  P   +L S   DR +R+W T+    + +     GH  +V  V + P  + + S
Sbjct: 19  CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLAS 78
Query: 240 ASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHSNVVIAAD 299
           AS D +  IW+                     K  D+        V  L GH N V +  
Sbjct: 79  ASFDATTCIWK---------------------KNQDDFEC-----VTTLEGHENEVKSVA 112
Query: 300 WLSDGEQVITASWDRVANLFDVE 322
           W   G  + T S D+   +++V+
Sbjct: 113 WAPSGNLLATCSRDKSVWVWEVD 135

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
            SGH  GVW +    G  +L S S DRTVR+W  + G C   + GH+ +V  +  +  K+
Sbjct: 158 LSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 216
Query: 236 L--VLSASGDKSVHIWQ 250
           +  +++ S D ++H+W+
Sbjct: 217 IKYIVTGSRDNTLHVWK 233

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
              +++S S DK++ +W   I  +CL
Sbjct: 118 KASMIISGSRDKTIKVW--TIKGQCL 141

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 220 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS 278
           GH+G V S+     + +L+LSAS DK++      I+W+                  D+  
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKL---------------TGDDQK 53
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
             +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q
Sbjct: 54  FGV--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 101

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
              +++S S DK++ +W   I  +CL
Sbjct: 118 KASMIISGSRDKTIKVW--TIKGQCL 141

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 220 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS 278
           GH+G V S+     + +L+LSAS DK++      I+W+                  D+  
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKL---------------TGDDQK 53
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
             +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q
Sbjct: 54  FGV--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 101

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
              +++S S DK++ +W   I  +CL
Sbjct: 118 KASMIISGSRDKTIKVW--TIKGQCL 141

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 220 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS 278
           GH+G V S+     + +L+LSAS DK++      I+W+                  D+  
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKL---------------TGDDQK 53
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
             +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q
Sbjct: 54  FGV--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 101

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 52  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 111
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
              +++S S DK++ +W   I  +CL
Sbjct: 112 KASMIISGSRDKTIKVW--TIKGQCL 135

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 220 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS 278
           GH+G V S+     + +L+LSAS DK++      I+W+                  D+  
Sbjct: 9   GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKL---------------TGDDQK 47
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
             +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q
Sbjct: 48  FGV--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 95

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
              +++S S DK++ +W   I  +CL
Sbjct: 118 KASMIISGSRDKTIKVW--TIKGQCL 141

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 220 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS 278
           GH+G V S+     + +L+LSAS DK++      I+W+                  D+  
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKL---------------TGDDQK 53
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
             +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q
Sbjct: 54  FGV--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 101

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
           R   GH   V DVA+        SAS D ++RLW+ Q G+C  ++ GH+  V SV F P+
Sbjct: 61  RRLEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPD 120
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTP--------- 284
              ++S   D ++ +W   +  EC+                D  S    +P         
Sbjct: 121 NRQIVSGGRDNALRVWN--VKGECM-------HTLSRGAHTDWVSCVRFSPSLDAPVIVS 171
Query: 285 -----------------VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 327
                            V +L GH+N V +     DG    ++  D VA L+D+  G  L
Sbjct: 172 GGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEAL 231
Query: 328 QSL 330
             +
Sbjct: 232 SEM 234

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +RSF GH   V D  +        SAS D+T+RLW   TG+   ++ GH   V SV    
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDK 117
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
               ++S S DK++ +W   I  +CL
Sbjct: 118 KASXIISGSRDKTIKVW--TIKGQCL 141

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 220 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS 278
           GH+G V S+     + +L+LSAS DK++      I+W+                  D+  
Sbjct: 15  GHNGWVTSLATSAGQPNLLLSASRDKTL------ISWKL---------------TGDDQK 53
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
             +  PV+   GHS++V      +DG   ++ASWD+   L+DV TG   Q
Sbjct: 54  FGV--PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 101

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
           ++ +GH   V D+A+        S+S D+T+RLW  +TG    ++ GH   V SV F P+
Sbjct: 70  KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPD 129
Query: 234 KDLVLSASGDKSVHIW 249
              +LSA  ++ + +W
Sbjct: 130 NRQILSAGAEREIKLW 145

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 190 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
           P +P + +AS D T+++W  QT  CV    GH  +V+   F P   +++S S D ++ IW
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255
Query: 250 QA 251
            +
Sbjct: 256 NS 257

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 185 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 244
           D    P +P + +AS D T+++W  QT  CV    GH  +V+   F P   +++S S D 
Sbjct: 191 DYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250
Query: 245 SVHIWQA 251
           ++ IW +
Sbjct: 251 TLKIWNS 257

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 185 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 244
           D    P +P + +AS D T+++W  QT  CV    GH  +V+   F P   +++S S D 
Sbjct: 191 DYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250
Query: 245 SVHIWQA 251
           ++ IW +
Sbjct: 251 TLKIWNS 257

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 190 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
           P +P + +AS D T+++W  QT  CV    GH  +V+   F P   +++S S D ++ IW
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255
Query: 250 QA 251
            +
Sbjct: 256 NS 257

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 147 KTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRL 206
           K  + L+  T KI   +  + L C +I   +GH   V  + ++  + V+ + S+D TVR+
Sbjct: 145 KIVSGLRDNTIKI---WDKNTLECKRI--LTGHTGSV--LCLQYDERVIITGSSDSTVRV 197
Query: 207 WSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXX 266
           W   TG+ +     H  +V  +RF  N  ++++ S D+S+ +W                 
Sbjct: 198 WDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMA-------------- 241
Query: 267 XXXXXKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 326
                     + ITLR   + L+GH   V   D+  D + +++AS DR   +++  T   
Sbjct: 242 --------SPTDITLR---RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288
Query: 327 LQSL 330
           +++L
Sbjct: 289 VRTL 292

>pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The Eed-Ezh2 Polycomb Complex Length = 402

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 38/186 (20%)
Query: 160 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 207
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 77  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 136
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXX 266
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 137 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 184
Query: 267 XXXXXKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 326
                        TL      + GH + V++AD+   GE++++   D    L+ + +  +
Sbjct: 185 -------------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRM 231
Query: 327 LQSLTE 332
           + ++ E
Sbjct: 232 MNAIKE 237

>pdb|3JZN|A Chain A, Structure Of Eed In Apo Form Length = 366

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 38/186 (20%)
Query: 160 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 207
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 41  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 100
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXX 266
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 101 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 148
Query: 267 XXXXXKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 326
                        TL      + GH + V++AD+   GE++++   D    L+ + +  +
Sbjct: 149 -------------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRM 195
Query: 327 LQSLTE 332
           + ++ E
Sbjct: 196 MNAIKE 201

>pdb|3IIW|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H3k27 Peptide Length = 365

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 38/186 (20%)
Query: 160 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 207
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 40  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 99
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXX 266
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 100 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 147
Query: 267 XXXXXKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 326
                        TL      + GH + V++AD+   GE++++   D    L+ + +  +
Sbjct: 148 -------------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRM 194
Query: 327 LQSLTE 332
           + ++ E
Sbjct: 195 MNAIKE 200

>pdb|3IIY|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H1k26 Peptide Length = 365

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 38/186 (20%)
Query: 160 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 207
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 40  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 99
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXX 266
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 100 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 147
Query: 267 XXXXXKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 326
                        TL      + GH + V++AD+   GE++++   D    L+ + +  +
Sbjct: 148 -------------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRM 194
Query: 327 LQSLTE 332
           + ++ E
Sbjct: 195 MNAIKE 200

>pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed Length = 361

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 38/186 (20%)
Query: 160 VSSFKTSLLSCY---KIRSFSGHRDG---------VWDVAVRPGQPVLGSASADRTVRLW 207
           V S + +L  C+   +IR    + D           W        P+L  A +   +R+ 
Sbjct: 36  VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 95
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXX 266
           +  T +C+  Y GH  ++N ++F P + +L+LS S D ++ +W    +            
Sbjct: 96  NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD------------ 143
Query: 267 XXXXXKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 326
                        TL      + GH + V++AD+   GE++++   D    L+ + +  +
Sbjct: 144 -------------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRM 190
Query: 327 LQSLTE 332
           + ++ E
Sbjct: 191 MNAIKE 196

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 173 IRSFSGHRDGVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
           ++SF GH   V  + + P +      S   D+   +W  ++G+CV  +  H   VNSVR+
Sbjct: 189 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY 248
Query: 231 LPNKDLVLSASGDKSVHIW 249
            P+ D   S S D +  ++
Sbjct: 249 YPSGDAFASGSDDATCRLY 267

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
           R  +GH   V DV +        S S D  +RLW    G    ++ GH+  V SV F  +
Sbjct: 424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 483
Query: 234 KDLVLSASGDKSVHIWQAV 252
              ++SAS D+++ +W  +
Sbjct: 484 NRQIVSASRDRTIKLWNTL 502

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
           R+  GH   V DV +        S S D T+RLW   TG    ++ GH+  V SV F  +
Sbjct: 80  RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 139
Query: 234 KDLVLSASGDKSVHIWQAV 252
              ++S S DK++ +W  +
Sbjct: 140 NRQIVSGSRDKTIKLWNTL 158

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 24/107 (22%)
Query: 220 GHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS 278
           GH+G V  +   P   D++LSAS DK++ +W+                        DE++
Sbjct: 36  GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLT---------------------RDETN 74
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 325
             +  P + L GHS+ V      SDG+  ++ SWD    L+D+ TGT
Sbjct: 75  YGI--PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT 119

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
           R+  GH   V DV +        S S D T+RLW   TG    ++ GH+  V SV F  +
Sbjct: 57  RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 234 KDLVLSASGDKSVHIWQAV 252
              ++S S DK++ +W  +
Sbjct: 117 NRQIVSGSRDKTIKLWNTL 135

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 24/107 (22%)
Query: 220 GHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS 278
           GH+G V  +   P   D++LSAS DK++ +W+                        DE++
Sbjct: 13  GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLT---------------------RDETN 51
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 325
             +  P + L GHS+ V      SDG+  ++ SWD    L+D+ TGT
Sbjct: 52  YGI--PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT 96

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 74/189 (39%), Gaps = 32/189 (16%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
           K+     H D V   A       + + SAD+ V++W + TGK V  Y  HS  VN   F 
Sbjct: 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFT 708
Query: 232 PNKDLVLSASG--DKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSI-------TL 281
              + +L A+G  D  + +W  +   EC              +  PD+  +       TL
Sbjct: 709 NKSNHLLLATGSNDFFLKLWD-LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL 767
Query: 282 R------------TPVKELLGHSN--------VVIAADWLSDGEQVITASWDRVANLFDV 321
           R              VK     S         +V    W +DG+++I A+ ++V  LFD+
Sbjct: 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL-LFDI 826
Query: 322 ETGTILQSL 330
            T  +L  +
Sbjct: 827 HTSGLLAEI 835

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 74/189 (39%), Gaps = 32/189 (16%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
           K+     H D V   A       + + SAD+ V++W + TGK V  Y  HS  VN   F 
Sbjct: 656 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFT 715
Query: 232 PNKDLVLSASG--DKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSI-------TL 281
              + +L A+G  D  + +W  +   EC              +  PD+  +       TL
Sbjct: 716 NKSNHLLLATGSNDFFLKLWD-LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL 774
Query: 282 R------------TPVKELLGHSN--------VVIAADWLSDGEQVITASWDRVANLFDV 321
           R              VK     S         +V    W +DG+++I A+ ++V  LFD+
Sbjct: 775 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL-LFDI 833
Query: 322 ETGTILQSL 330
            T  +L  +
Sbjct: 834 HTSGLLAEI 842

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 16/151 (10%)
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 238
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 194 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 253
Query: 239 SASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKE----------- 287
           + S D +  ++    + E +                 +S   L     +           
Sbjct: 254 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 313
Query: 288 -----LLGHSNVVIAADWLSDGEQVITASWD 313
                L GH N V       DG  V T SWD
Sbjct: 314 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 344

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 16/151 (10%)
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 238
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 239 SASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKE----------- 287
           + S D +  ++    + E +                 +S   L     +           
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 288 -----LLGHSNVVIAADWLSDGEQVITASWD 313
                L GH N V       DG  V T SWD
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 16/151 (10%)
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 238
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 239 SASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKE----------- 287
           + S D +  ++    + E +                 +S   L     +           
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 288 -----LLGHSNVVIAADWLSDGEQVITASWD 313
                L GH N V       DG  V T SWD
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 16/151 (10%)
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 238
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 239 SASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKE----------- 287
           + S D +  ++    + E +                 +S   L     +           
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 288 -----LLGHSNVVIAADWLSDGEQVITASWD 313
                L GH N V       DG  V T SWD
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 16/151 (10%)
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 238
           H   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ F PN +   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 239 SASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKE----------- 287
           + S D +  ++    + E +                 +S   L     +           
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 288 -----LLGHSNVVIAADWLSDGEQVITASWD 313
                L GH N V       DG  V T SWD
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 173 IRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
           I++FSG H D V  +AV      + S S D  ++L    TG  +  Y GH   V  ++ L
Sbjct: 176 IKTFSGIHNDVVRHLAVVDDGHFI-SCSNDGLIKLVDXHTGDVLRTYEGHESFVYCIKLL 234
Query: 232 PNKDLVLSASGDKSVHIW 249
           PN D+V S   D++V IW
Sbjct: 235 PNGDIV-SCGEDRTVRIW 251

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 197 SASADRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
           S S D TVRLW  + T + V  Y GH G +NSV+F P+     + S D +  ++
Sbjct: 223 SGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLF 276

>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 35/170 (20%)
Query: 178 GHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVR 229
           GH   V D+A  P    V+ S S D TV +W    G  VL          GH+  V  V 
Sbjct: 79  GHTAPVLDIAWXPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVA 138
Query: 230 FLPN-KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKEL 288
           + P  ++++LSA  D  + +W                           + +TL   V   
Sbjct: 139 WHPTAQNVLLSAGXDNVILVWDVGTG---------------------AAVLTLGPDV--- 174
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
             H + + + DW  DG  + T+  D+   + +   GT++     P E  R
Sbjct: 175 --HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTR 222

>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 35/170 (20%)
Query: 178 GHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVR 229
           GH   V D+A  P    V+ S S D TV +W    G  VL          GH+  V  V 
Sbjct: 79  GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVA 138
Query: 230 FLPN-KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKEL 288
           + P  ++++LSA  D  + +W                           + +TL   V   
Sbjct: 139 WHPTAQNVLLSAGCDNVILVWDVGTG---------------------AAVLTLGPDV--- 174
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
             H + + + DW  DG  + T+  D+   + +   GT++     P E  R
Sbjct: 175 --HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTR 222

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	360
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.97
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.97
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.97
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.97
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.96
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.96
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.96
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.96
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.96
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.96
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.96
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.96
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.96
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.96
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.95
2pm7_B	297	Protein transport protein SEC13, protein transport	99.95
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.95
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.95
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.95
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.95
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.95
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.95
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.95
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.95
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.94
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.94
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.94
2pm7_B	297	Protein transport protein SEC13, protein transport	99.94
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.94
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.94
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.94
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.94
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.94
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.94
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.94
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.94
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.94
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.94
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.94
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.93
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.93
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.93
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.93
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.93
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.93
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.93
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.93
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.93
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.93
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.93
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.92
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.92
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.92
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.92
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.92
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.92
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.92
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.92
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.92
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.92
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.92
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.91
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.91
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.91
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.91
3jro_A	753	Fusion protein of protein transport protein SEC13	99.91
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.91
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.91
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.91
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.91
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.91
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.91
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.91
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.91
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.91
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.91
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.91
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.91
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.91
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.91
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.9
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.9
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.9
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.9
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.9
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.9
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.9
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.89
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.89
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.89
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.89
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.89
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.89
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.89
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.89
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.89
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.89
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.89
3jro_A	753	Fusion protein of protein transport protein SEC13	99.89
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.89
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.88
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.88
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.88
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.88
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.88
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.88
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.88
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.87
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.87
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.87
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.87
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.87
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.87
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.87
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.87
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.87
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.86
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.86
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.86
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.85
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.83
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.82
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.81
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.79
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.79
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.78
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.77
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.77
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.77
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.74
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.66
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.65
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.62
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.62
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.6
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.6
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.6
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.59
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.59
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.57
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.56
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.56
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.56
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.56
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.55
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.55
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.54
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.52
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.52
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.52
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.52
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.52
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.51
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.51
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.5
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.48
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.46
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.45
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.44
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.43
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.41
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.4
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.4
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.38
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.37
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.37
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.36
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.35
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.34
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.33
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.3
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.29
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.25
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.22
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.22
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.22
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.2
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.19
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.18
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.16
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.13
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.12
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.11
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.11
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.07
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.07
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.05
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.03
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.02
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.01
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.99
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.96
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.96
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.94
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.91
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.85
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.84
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.83
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.82
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.81
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.77
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.77
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.76
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.74
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.72
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.71
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.68
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.67
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.67
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.61
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.61
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.59
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.58
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.56
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.56
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.56
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.55
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.47
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.39
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.39
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.34
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.34
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.33
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.3
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.29
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.27
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.23
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.2
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.16
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.09
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.07
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.02
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.01
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.95
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.95
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.94
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.93
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.92
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.9
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.9
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.9
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	97.74
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.67
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.67
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	97.62
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	97.6
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.58
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.56
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.54
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	97.5
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.49
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.43
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.43
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.4
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.27
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.25
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.22
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.16
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.16
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.14
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.14
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.09
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.08
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.07
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.07
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.06
3v65_B	386	Low-density lipoprotein receptor-related protein;	96.96
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	96.92
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	96.9
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	96.87
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	96.8
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.78
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	96.78
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.68
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	96.64
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	96.59
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	96.59
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	96.57
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.57
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.54
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.5
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.39
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	96.29
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.25
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.25
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	96.24
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.22
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	96.19
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.15
2p4o_A	306	Hypothetical protein; putative lactonase, structur	96.09
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.99
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	95.98
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	95.96
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	95.86
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	95.82
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	95.82
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	95.8
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	95.69
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	95.66
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	95.5
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	95.46
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	95.45
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	95.28
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	94.93
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	94.8
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	94.42
3kya_A	496	Putative phosphatase; structural genomics, joint c	94.32
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	94.03
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	93.92
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	93.83
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	93.49
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	93.23
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	93.23
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	93.11
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	93.04
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	92.36
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	92.31
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	92.18
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	92.1
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	91.96
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	91.86
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	91.8
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	91.57
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	91.53
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	90.33
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	90.3
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	90.12
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	89.82
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	89.56
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	89.26
2oxj_A	34	Hybrid alpha/beta peptide based on the GCN4-P1 Se	89.04
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	88.94
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	87.39
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	87.23
3m48_A	33	General control protein GCN4; leucine zipper, synt	86.94
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	86.72
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	86.5
3c3g_A	33	Alpha/beta peptide with the GCN4-PLI SIDE chain S	85.85
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	85.56
3c3f_A	34	Alpha/beta peptide with the GCN4-PLI SIDE chain S	84.71
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	84.2
1uo4_A	34	General control protein GCN4; four helix bundle, c	84.11
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	84.1
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	83.79
2bni_A	34	General control protein GCN4; four helix bundle, a	83.72
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	82.83
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	82.78
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	82.74
2wq1_A	33	General control protein GCN4; TAA, nucleus, coiled	82.57
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	82.07
2hy6_A	34	General control protein GCN4; protein design, para	81.36
1kd8_A	36	GABH AIV, GCN4 acid base heterodimer acid-D12IA16V	81.05
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	80.58
1kd8_B	36	GABH BLL, GCN4 acid base heterodimer base-D12LA16L	80.36
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	80.18

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.97  E-value=1.6e-28  Score=223.89  Aligned_cols=206  Identities=16%  Similarity=0.113  Sum_probs=159.5

Q ss_pred             eeecCCeEEEeeecCccce--eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEE
Q psy11015        152 LKVQTSKIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR  229 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~  229 (360)
                      +.+...+.+.+|+......  .....+.+|.+.|++++|+|++++|++|+.|++|++||+.+++++..+.+|.+.|.+++
T Consensus        97 ~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~  176 (344)
T 4gqb_B           97 LVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVA  176 (344)
T ss_dssp             EEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             EEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence            3455566667776654332  23345679999999999999999999999999999999999999999999999999999


Q ss_pred             EeeCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC--CC----------CCCCCCCC-----ccccccceeEeeCC
Q psy11015        230 FLPNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSD--LD----------ESKEPDES-----SITLRTPVKELLGH  291 (360)
Q Consensus       230 ~~p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~-----~~~~~~~~~~~~~h  291 (360)
                      |+|++. +|++|+.|++|++||++++.....+.......  ..          ......+.     ......++..+.+|
T Consensus       177 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h  256 (344)
T 4gqb_B          177 ASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVH  256 (344)
T ss_dssp             ECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECC
T ss_pred             ecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCC
Confidence            999884 78999999999999999887655443221110  00          00011111     22345577889999


Q ss_pred             CCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEcc-cccchh
Q psy11015        292 SNVVIAADWLSDG-EQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASP-LLLAIR  358 (360)
Q Consensus       292 ~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~-~~~~ir  358 (360)
                      ...|++++|+|+| ++|++|+.||+|+|||+.+++.+ .+.+|.+.|++++|+|+|. +++|+ .|+.|+
T Consensus       257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~  325 (344)
T 4gqb_B          257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV  325 (344)
T ss_dssp             SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred             CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence            9999999999998 57999999999999999998765 5678999999999999885 67665 477765

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.97  E-value=9.3e-29  Score=221.48  Aligned_cols=160  Identities=17%  Similarity=0.202  Sum_probs=146.0

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      ...++|.+|.+.|++++|+|++++|++|+.||+|++||+.++.++..+.+|..+|.+++|+|++++|++|+.|++|++||
T Consensus         4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd   83 (304)
T 2ynn_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN   83 (304)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred             eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQS  329 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~  329 (360)
                      +.++                            ..+..+.+|...|.+++|+|++.+|++|+.||+|++||++++ .....
T Consensus        84 ~~~~----------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~  135 (304)
T 2ynn_A           84 YNTG----------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT  135 (304)
T ss_dssp             TTTC----------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE
T ss_pred             CCCC----------------------------cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh
Confidence            9876                            346678899999999999999999999999999999999887 55678


Q ss_pred             EecCCCceEEEEEcC-CCCEEEccc-ccchh
Q psy11015        330 LTEPGEAIRAAAGRT-GGPIRASPL-LLAIR  358 (360)
Q Consensus       330 l~~h~~~v~~~~~~~-~g~~las~~-~~~ir  358 (360)
                      +.+|...|++++|+| ++.++++++ |+.||
T Consensus       136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~  166 (304)
T 2ynn_A          136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVK  166 (304)
T ss_dssp             ECCCCSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred             hcccCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence            899999999999999 677777665 55554

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.97  E-value=1.3e-28  Score=229.88  Aligned_cols=204  Identities=25%  Similarity=0.386  Sum_probs=165.9

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      .+..+..+.+|..  .++...+++.+|.+.|++++|+|++.+|++|+.||+|++||+.+++++..+.+|...|.+++|+|
T Consensus       125 s~s~Dg~i~vwd~--~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p  202 (410)
T 1vyh_C          125 SASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP  202 (410)
T ss_dssp             EEESSSCEEEEET--TTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECS
T ss_pred             EEeCCCeEEEEEC--CCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeC
Confidence            3344444444543  46677889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC---------CCCCCCC-----ccccccceeEeeCCCCcEEEE
Q psy11015        233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE---------SKEPDES-----SITLRTPVKELLGHSNVVIAA  298 (360)
Q Consensus       233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-----~~~~~~~~~~~~~h~~~v~~i  298 (360)
                      +++++++|+.|++|++||+.++.....+..+.......         .....+.     ..........+.+|...|.++
T Consensus       203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~  282 (410)
T 1vyh_C          203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI  282 (410)
T ss_dssp             SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred             CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEE
Confidence            99999999999999999999987665544432211111         0111111     122334567788999999999


Q ss_pred             EEcCC--------------------CCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        299 DWLSD--------------------GEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       299 ~~sp~--------------------g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      +|+|+                    |.+|++|+.||+|++||++++.++..+.+|...|++++|+|+|.++++++ |+.|
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i  362 (410)
T 1vyh_C          283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL  362 (410)
T ss_dssp             EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEE
T ss_pred             EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence            99996                    67999999999999999999999999999999999999999999888776 4445


Q ss_pred             h
Q psy11015        358 R  358 (360)
Q Consensus       358 r  358 (360)
                      |
T Consensus       363 ~  363 (410)
T 1vyh_C          363 R  363 (410)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.97  E-value=2.2e-28  Score=220.95  Aligned_cols=163  Identities=21%  Similarity=0.305  Sum_probs=150.4

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ..+.....+.+|...|.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|.+++|+|++++|++|+.|++|+
T Consensus       152 ~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~  231 (321)
T 3ow8_A          152 ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK  231 (321)
T ss_dssp             TTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred             CCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence            45566778889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +||++++                            .....+.+|...|.+++|+|++.+|++|+.||+|++||+.+++++
T Consensus       232 iwd~~~~----------------------------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~  283 (321)
T 3ow8_A          232 IYDVQHA----------------------------NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV  283 (321)
T ss_dssp             EEETTTC----------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             EEECCCc----------------------------ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence            9998765                            345678899999999999999999999999999999999999999


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .++.+|...|++++|+|+|..+++++ |+.||
T Consensus       284 ~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~  315 (321)
T 3ow8_A          284 HTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIH  315 (321)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred             EEEcCCCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence            99999999999999999999888766 45554

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.96  E-value=6.3e-28  Score=219.50  Aligned_cols=164  Identities=16%  Similarity=0.307  Sum_probs=147.8

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      ..++..+.++.+|.+.|++++|+|++.+|++|+.||+|++||++++.++..+.+|...|.+++|+|++++|++|+.|++|
T Consensus       171 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v  250 (340)
T 1got_B          171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC  250 (340)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             CCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcE
Confidence            35677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      ++||++++...                            ..+.  .+...|.+++|+|+|++|++|+.||.|++||+.++
T Consensus       251 ~iwd~~~~~~~----------------------------~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~  302 (340)
T 1got_B          251 RLFDLRADQEL----------------------------MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA  302 (340)
T ss_dssp             EEEETTTTEEE----------------------------EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             EEEECCCCcEE----------------------------EEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence            99999876332                            2222  23457999999999999999999999999999999


Q ss_pred             eEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ..+..+.+|...|++++|+|+|.+++|++ |+.||
T Consensus       303 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~  337 (340)
T 1got_B          303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK  337 (340)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred             cEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence            99999999999999999999999888776 55564

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.96  E-value=2.4e-27  Score=213.83  Aligned_cols=179  Identities=25%  Similarity=0.338  Sum_probs=158.1

Q ss_pred             eeeecCCeEEEeeecCc---cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEE
Q psy11015        151 KLKVQTSKIVSSFKTSL---LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS  227 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~  227 (360)
                      .+.+.....+..|....   ..+.+++.+.+|...|.+++|+|++.+|++|+.|++|++||+.+++++..+.+|.+.|.+
T Consensus        33 l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~  112 (319)
T 3frx_A           33 LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMS  112 (319)
T ss_dssp             EEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred             EEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEE
Confidence            34555666666676533   335678899999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC----
Q psy11015        228 VRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD----  303 (360)
Q Consensus       228 i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~----  303 (360)
                      ++|+|++.++++|+.|++|++||+...                             .+..+.+|...|.+++|+|.    
T Consensus       113 ~~~~~~~~~l~s~s~D~~i~vwd~~~~-----------------------------~~~~~~~h~~~v~~~~~~~~~~~~  163 (319)
T 3frx_A          113 VDIDKKASMIISGSRDKTIKVWTIKGQ-----------------------------CLATLLGHNDWVSQVRVVPNEKAD  163 (319)
T ss_dssp             EEECTTSCEEEEEETTSCEEEEETTSC-----------------------------EEEEECCCSSCEEEEEECCC----
T ss_pred             EEEcCCCCEEEEEeCCCeEEEEECCCC-----------------------------eEEEEeccCCcEEEEEEccCCCCC
Confidence            999999999999999999999998643                             46678899999999999985    


Q ss_pred             --CCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        304 --GEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       304 --g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                        +.++++|+.||.|++||+++++....+.+|...|++++|+|+|.++++++ |+.||
T Consensus       164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~  221 (319)
T 3frx_A          164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIM  221 (319)
T ss_dssp             --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred             CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence              45899999999999999999999999999999999999999999998876 55554

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.96  E-value=1.4e-27  Score=215.62  Aligned_cols=181  Identities=19%  Similarity=0.280  Sum_probs=163.7

Q ss_pred             eeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEE
Q psy11015        150 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR  229 (360)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~  229 (360)
                      ..+.+.....+.+|............+.+|...|.+++|++++..+++|+.|++|++||+.+++++..+.+|...+.+++
T Consensus        50 ~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~  129 (321)
T 3ow8_A           50 TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLA  129 (321)
T ss_dssp             EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEE
T ss_pred             EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEE
Confidence            34567777788888877767777788999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      |+|++++|++|+.|+.|++||+.++                            .....+..|...|.+++|+|+|++|++
T Consensus       130 ~spdg~~l~~g~~dg~v~i~~~~~~----------------------------~~~~~~~~~~~~v~~~~~spdg~~las  181 (321)
T 3ow8_A          130 FSPDSQYLATGTHVGKVNIFGVESG----------------------------KKEYSLDTRGKFILSIAYSPDGKYLAS  181 (321)
T ss_dssp             ECTTSSEEEEECTTSEEEEEETTTC----------------------------SEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred             ECCCCCEEEEEcCCCcEEEEEcCCC----------------------------ceeEEecCCCceEEEEEECCCCCEEEE
Confidence            9999999999999999999999876                            345567788889999999999999999


Q ss_pred             EECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        310 ASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |+.||.|++||+++++.+..+.+|..+|++++|+|+|.++++++ |+.||
T Consensus       182 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~  231 (321)
T 3ow8_A          182 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK  231 (321)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred             EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence            99999999999999999999999999999999999999998877 44443

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.96  E-value=4.3e-28  Score=226.38  Aligned_cols=158  Identities=27%  Similarity=0.443  Sum_probs=146.8

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~  252 (360)
                      ...+.+|.++|++++|+|++.+|++|+.||+|++||+.+++....+.+|.+.|.+++|+|++++|++|+.|++|++||+.
T Consensus       101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~  180 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ  180 (410)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                      ++                            .++..+.+|...|.+++|+|+|++|++|+.||+|++||++++.++.++.+
T Consensus       181 ~~----------------------------~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~  232 (410)
T 1vyh_C          181 GF----------------------------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG  232 (410)
T ss_dssp             SS----------------------------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CC----------------------------ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC
Confidence            65                            34667789999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        333 PGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |...|.+++|+|+|.++++++ |+.||
T Consensus       233 h~~~v~~~~~~~~g~~l~s~s~D~~v~  259 (410)
T 1vyh_C          233 HREWVRMVRPNQDGTLIASCSNDQTVR  259 (410)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCccEEEEEECCCCCEEEEEcCCCeEE
Confidence            999999999999999988876 44443

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.96  E-value=1.2e-26  Score=210.99  Aligned_cols=175  Identities=19%  Similarity=0.309  Sum_probs=153.2

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCeEEE
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSV  228 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i  228 (360)
                      .+..+..+..|..  .++..+..+..|...|.+++|+|++++|++|+.|+.|++|++.++    .....+.+|.+.|.++
T Consensus        72 s~s~Dg~v~iWd~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~  149 (340)
T 1got_B           72 SASQDGKLIIWDS--YTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCC  149 (340)
T ss_dssp             EEETTTEEEEEET--TTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEE
T ss_pred             EEeCCCcEEEEEC--CCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEE
Confidence            4444555555543  456778889999999999999999999999999999999999875    4667888999999999


Q ss_pred             EEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015        229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI  308 (360)
Q Consensus       229 ~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~  308 (360)
                      .|+|++. +++++.|++|++||+.++                            .++..+.+|.+.|.+++|+|++++++
T Consensus       150 ~~~~~~~-l~s~s~d~~i~~wd~~~~----------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~  200 (340)
T 1got_B          150 RFLDDNQ-IVTSSGDTTCALWDIETG----------------------------QQTTTFTGHTGDVMSLSLAPDTRLFV  200 (340)
T ss_dssp             EEEETTE-EEEEETTSCEEEEETTTT----------------------------EEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred             EECCCCc-EEEEECCCcEEEEECCCC----------------------------cEEEEEcCCCCceEEEEECCCCCEEE
Confidence            9998875 889999999999999876                            34567889999999999999999999


Q ss_pred             EEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        309 TASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       309 tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +|+.||+|++||++++.++..+.+|...|++++|+|+|.++++++ |+.||
T Consensus       201 sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~  251 (340)
T 1got_B          201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR  251 (340)
T ss_dssp             EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEE
Confidence            999999999999999999999999999999999999999988877 44443

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.96  E-value=3.2e-27  Score=213.98  Aligned_cols=184  Identities=19%  Similarity=0.212  Sum_probs=149.0

Q ss_pred             eeeecCCeEEEeeecCccceeeeeee-ec-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECC-------CCeEEEEEeCC
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSF-SG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-------TGKCVLQYSGH  221 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~-h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~-------~~~~~~~~~~h  221 (360)
                      ...+.....+..|.........+..+ .+ |.+.|++++|+|++++|++|+.|++|++||+.       ...++..+.+|
T Consensus        27 las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h  106 (330)
T 2hes_X           27 LATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH  106 (330)
T ss_dssp             EEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--
T ss_pred             EEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC
Confidence            34455566667777665445566666 45 99999999999999999999999999999985       34677889999


Q ss_pred             CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      .+.|.+++|+|++++|++|+.|++|++||+.....                        ...++..+.+|...|.+++|+
T Consensus       107 ~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~------------------------~~~~~~~~~~h~~~v~~v~~~  162 (330)
T 2hes_X          107 ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE------------------------EYECISVLQEHSQDVKHVIWH  162 (330)
T ss_dssp             --CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC------------------------CCEEEEEECCCSSCEEEEEEC
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC------------------------CeEEEEEeccCCCceEEEEEC
Confidence            99999999999999999999999999999853311                        112466788999999999999


Q ss_pred             CCCCEEEEEECCCcEEEEECCCC--eEEEEEecCCCceEEEEEcCC--CCEEEccc-ccchh
Q psy11015        302 SDGEQVITASWDRVANLFDVETG--TILQSLTEPGEAIRAAAGRTG--GPIRASPL-LLAIR  358 (360)
Q Consensus       302 p~g~~l~tgs~dg~i~iwd~~~~--~~~~~l~~h~~~v~~~~~~~~--g~~las~~-~~~ir  358 (360)
                      |++.+|++|+.||+|++||..++  +++..+.+|...|++++|+|+  +.++++++ |+.||
T Consensus       163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~  224 (330)
T 2hes_X          163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVR  224 (330)
T ss_dssp             SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEE
T ss_pred             CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEE
Confidence            99999999999999999998876  678899999999999999998  66777665 55554

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.96  E-value=6.7e-27  Score=209.37  Aligned_cols=177  Identities=24%  Similarity=0.267  Sum_probs=150.6

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeEEEEEe
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~~i~~~  231 (360)
                      .+.....+..|..  .++.++..+.+|.+.|++++|+|++++|++|+.||+|++||++++ .+...+.+|...|.+++|+
T Consensus        72 s~s~d~~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~  149 (304)
T 2ynn_A           72 VGSDDFRIRVFNY--NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFN  149 (304)
T ss_dssp             EEETTSEEEEEET--TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEEC
T ss_pred             EECCCCEEEEEEC--CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEEC
Confidence            3444445555543  567788999999999999999999999999999999999999887 5667889999999999999


Q ss_pred             e-CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC--CCCEEE
Q psy11015        232 P-NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--DGEQVI  308 (360)
Q Consensus       232 p-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp--~g~~l~  308 (360)
                      | ++.+|++|+.|++|++||+..+..                           ......+|...+..++|+|  ++.+|+
T Consensus       150 p~~~~~l~sgs~D~~v~iwd~~~~~~---------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~  202 (304)
T 2ynn_A          150 PKDPSTFASGCLDRTVKVWSLGQSTP---------------------------NFTLTTGQERGVNYVDYYPLPDKPYMI  202 (304)
T ss_dssp             TTCTTEEEEEETTSEEEEEETTCSSC---------------------------SEEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCCc---------------------------cceeccCCcCcEEEEEEEEcCCCCEEE
Confidence            9 678999999999999999876521                           1222345678899999987  778999


Q ss_pred             EEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        309 TASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       309 tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +|+.||+|++||+++++++.++.+|...|++++|+|++++++|++ |+.||
T Consensus       203 s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~  253 (304)
T 2ynn_A          203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLK  253 (304)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred             EEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEE
Confidence            999999999999999999999999999999999999999888876 55554

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.96  E-value=3e-27  Score=215.52  Aligned_cols=181  Identities=27%  Similarity=0.312  Sum_probs=152.0

Q ss_pred             eecCCeEEEeeecCccceeeee-eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--eEEEEEeCCCcCeEEEE
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVR  229 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~-~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~~~h~~~v~~i~  229 (360)
                      .+..+..+.+|........... ...+|.+.|.+++|+|++++|++|+.|++|++|++..+  .++..+.+|.+.|.+++
T Consensus        33 s~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~  112 (345)
T 3fm0_A           33 SCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA  112 (345)
T ss_dssp             EEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEE
T ss_pred             EEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEE
Confidence            3445556666665544333333 34789999999999999999999999999999999876  56888999999999999


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      |+|++++|++|+.|++|++||+..+...                         ..+..+.+|...|.+++|+|++.+|++
T Consensus       113 ~sp~~~~l~s~s~D~~v~iwd~~~~~~~-------------------------~~~~~~~~h~~~v~~~~~~p~~~~l~s  167 (345)
T 3fm0_A          113 WAPSGNLLATCSRDKSVWVWEVDEEDEY-------------------------ECVSVLNSHTQDVKHVVWHPSQELLAS  167 (345)
T ss_dssp             ECTTSSEEEEEETTSCEEEEEECTTSCE-------------------------EEEEEECCCCSCEEEEEECSSSSCEEE
T ss_pred             EeCCCCEEEEEECCCeEEEEECCCCCCe-------------------------EEEEEecCcCCCeEEEEECCCCCEEEE
Confidence            9999999999999999999998765221                         235677899999999999999999999


Q ss_pred             EECCCcEEEEECCCCe--EEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        310 ASWDRVANLFDVETGT--ILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~--~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |+.||+|++||..++.  +..++.+|...|++++|+|+|.+|++++ |+.||
T Consensus       168 ~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~  219 (345)
T 3fm0_A          168 ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVR  219 (345)
T ss_dssp             EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEE
Confidence            9999999999998875  4578889999999999999999988876 55554

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.96  E-value=6.6e-27  Score=209.75  Aligned_cols=160  Identities=27%  Similarity=0.441  Sum_probs=148.6

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      .....++.+|.+.|++++|+|++++|++|+.||.|++|++.+++....+.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw   92 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW   92 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  329 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~  329 (360)
                      |+.++                            ..+..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..
T Consensus        93 d~~~~----------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~  144 (312)
T 4ery_A           93 DVSSG----------------------------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT  144 (312)
T ss_dssp             ETTTC----------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             ECCCC----------------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence            99866                            34667889999999999999999999999999999999999999999


Q ss_pred             EecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        330 LTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       330 l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      +..|..+|.+++|+|+|.+++++. ++.|
T Consensus       145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  173 (312)
T 4ery_A          145 LPAHSDPVSAVHFNRDGSLIVSSSYDGLC  173 (312)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence            999999999999999999888776 4444

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.96  E-value=1.1e-26  Score=212.57  Aligned_cols=164  Identities=22%  Similarity=0.317  Sum_probs=146.1

Q ss_pred             ccceeeeeeeecCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      ..++.++.++.+|...|.+++|+|  ++..|++|+.||+|++||+++++++..+.+|...|.+++|+|++.+|++|+.|+
T Consensus       183 ~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~  262 (354)
T 2pbi_B          183 VESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA  262 (354)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCC
Confidence            356778899999999999999988  467999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      +|++||++.+...                            ..+.  .+...+.+++|+|+|.+|++|+.||.|++||+.
T Consensus       263 ~v~lwd~~~~~~~----------------------------~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~  314 (354)
T 2pbi_B          263 TCRLYDLRADREV----------------------------AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL  314 (354)
T ss_dssp             CEEEEETTTTEEE----------------------------EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             eEEEEECCCCcEE----------------------------EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence            9999999876332                            2222  234578999999999999999999999999999


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ++..+..+.+|...|++++|+|+|.+++|++ |+.||
T Consensus       315 ~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~  351 (354)
T 2pbi_B          315 KGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR  351 (354)
T ss_dssp             TCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred             CCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence            9999999999999999999999999888876 55554

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.95  E-value=4.4e-27  Score=214.38  Aligned_cols=163  Identities=24%  Similarity=0.366  Sum_probs=142.1

Q ss_pred             ceeeeeeeecCCC-CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE---EEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        169 SCYKIRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL---QYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       169 ~~~~~~~l~~h~~-~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~---~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      ...++.++.+|.+ .|++++|+|++.+|++|+.|++|+|||+.++....   ...+|.+.|.+++|+|++++|++|+.|+
T Consensus         4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~   83 (345)
T 3fm0_A            4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA   83 (345)
T ss_dssp             CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence            3467889999988 99999999999999999999999999998886432   2368999999999999999999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      ++++||+..+..                          ..+..+.+|...|.+++|+|+|++|++|+.||+|++||+.++
T Consensus        84 ~v~iw~~~~~~~--------------------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~  137 (345)
T 3fm0_A           84 TTCIWKKNQDDF--------------------------ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE  137 (345)
T ss_dssp             CEEEEEECCC-E--------------------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred             cEEEEEccCCCe--------------------------EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence            999999875521                          245678899999999999999999999999999999999876


Q ss_pred             ---eEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        325 ---TILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       325 ---~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                         .++..+.+|...|.+++|+|++.++++++ |+.|
T Consensus       138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i  174 (345)
T 3fm0_A          138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV  174 (345)
T ss_dssp             SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred             CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence               45677889999999999999999888876 4444

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.95  E-value=9.1e-27  Score=207.81  Aligned_cols=182  Identities=23%  Similarity=0.281  Sum_probs=153.3

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeE
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVN  226 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~  226 (360)
                      ...+..+..+.+|........++.++.+|.+.|++++|+|+  +.+|+||+.|++|++||+.++.  .+..+.+|...|.
T Consensus        24 las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~  103 (297)
T 2pm7_B           24 MATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN  103 (297)
T ss_dssp             EEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE
T ss_pred             EEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee
Confidence            34456667777787766666788999999999999999864  7899999999999999999874  6677889999999


Q ss_pred             EEEEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-
Q psy11015        227 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-  303 (360)
Q Consensus       227 ~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-  303 (360)
                      +++|+|+  +.+|++|+.|++|++||++.+..                          .....+.+|...|.+++|+|+ 
T Consensus       104 ~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~--------------------------~~~~~~~~h~~~v~~~~~~p~~  157 (297)
T 2pm7_B          104 SVQWAPHEYGPMLLVASSDGKVSVVEFKENGT--------------------------TSPIIIDAHAIGVNSASWAPAT  157 (297)
T ss_dssp             EEEECCGGGCSEEEEEETTSEEEEEEBCSSSC--------------------------BCCEEEECCSSCEEEEEECCCC
T ss_pred             EEEeCcCCCCcEEEEEECCCcEEEEEecCCCc--------------------------eeeeeeecccCccceEeecCCc
Confidence            9999997  88999999999999999875411                          113457789999999999997 


Q ss_pred             ------------CCEEEEEECCCcEEEEECCCCe----EEEEEecCCCceEEEEEcCCC---CEEEccc-ccchh
Q psy11015        304 ------------GEQVITASWDRVANLFDVETGT----ILQSLTEPGEAIRAAAGRTGG---PIRASPL-LLAIR  358 (360)
Q Consensus       304 ------------g~~l~tgs~dg~i~iwd~~~~~----~~~~l~~h~~~v~~~~~~~~g---~~las~~-~~~ir  358 (360)
                                  +++|++|+.||+|++||++++.    ....+.+|...|++++|+|++   .++||++ |+.||
T Consensus       158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~  232 (297)
T 2pm7_B          158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI  232 (297)
T ss_dssp             ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred             ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence                        5799999999999999998765    667889999999999999985   7888776 55554

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.95  E-value=2.5e-26  Score=209.11  Aligned_cols=181  Identities=20%  Similarity=0.262  Sum_probs=154.1

Q ss_pred             eeeecCCeEEEeeecCcc-----ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCe
Q psy11015        151 KLKVQTSKIVSSFKTSLL-----SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV  225 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v  225 (360)
                      .+.+.....+..|.....     .+.+...+.+|.+.|++++|+|++.++++|+.|++|++||+.+++++..+.+|.+.|
T Consensus        42 l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v  121 (343)
T 2xzm_R           42 LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEV  121 (343)
T ss_dssp             EEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCE
T ss_pred             EEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcE
Confidence            445666677777776432     356788899999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-
Q psy11015        226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-  304 (360)
Q Consensus       226 ~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-  304 (360)
                      .+++|+|++++|++|+.|++|++||+......                          ......+|...|.+++|+|++ 
T Consensus       122 ~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~--------------------------~~~~~~~~~~~v~~~~~~~~~~  175 (343)
T 2xzm_R          122 YSVAFSPDNRQILSAGAEREIKLWNILGECKF--------------------------SSAEKENHSDWVSCVRYSPIMK  175 (343)
T ss_dssp             EEEEECSSTTEEEEEETTSCEEEEESSSCEEE--------------------------ECCTTTSCSSCEEEEEECCCCC
T ss_pred             EEEEECCCCCEEEEEcCCCEEEEEeccCCcee--------------------------eeecccCCCceeeeeeeccccc
Confidence            99999999999999999999999998733111                          011123688899999999987 


Q ss_pred             ---------CEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        305 ---------EQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       305 ---------~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                               .++++|+.||.|++|| ..+.....+.+|...|++++|+|+|.++++++ |+.||
T Consensus       176 ~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~  238 (343)
T 2xzm_R          176 SANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL  238 (343)
T ss_dssp             SCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred             cccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence                     7999999999999999 56778888999999999999999999998876 44443

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.95  E-value=7.1e-27  Score=214.11  Aligned_cols=203  Identities=15%  Similarity=0.134  Sum_probs=152.7

Q ss_pred             cCCeEEEeeecCccceeee--eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015        155 QTSKIVSSFKTSLLSCYKI--RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~--~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      ...+.+.+|..........  ....+|.+.|++++|+|++++|++|+.||+|++||+.+++++..+.+|.+.|++++|+|
T Consensus       112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~  191 (357)
T 4g56_B          112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP  191 (357)
T ss_dssp             ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred             ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence            3344444554433322222  33458999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC--CC----------CCCCCCCC-----ccccccceeEeeCCCCc
Q psy11015        233 NKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSD--LD----------ESKEPDES-----SITLRTPVKELLGHSNV  294 (360)
Q Consensus       233 ~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~-----~~~~~~~~~~~~~h~~~  294 (360)
                      ++. ++++++.|++|++||++++.............  ..          ......+.     ......++..+.+|...
T Consensus       192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~  271 (357)
T 4g56_B          192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN  271 (357)
T ss_dssp             TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC
T ss_pred             CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee
Confidence            875 78999999999999998876554332221110  00          00001111     12334567888899999


Q ss_pred             EEEEEEcCCC-CEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcC-CCCEEEccc-ccchh
Q psy11015        295 VIAADWLSDG-EQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT-GGPIRASPL-LLAIR  358 (360)
Q Consensus       295 v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~-~g~~las~~-~~~ir  358 (360)
                      |++++|+|++ ++|++|+.||+|+|||+.+++.+..+ +|.+.|++++|+| ++.+|+|++ |+.||
T Consensus       272 v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~  337 (357)
T 4g56_B          272 ITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVL  337 (357)
T ss_dssp             EEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred             EEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence            9999999987 57999999999999999999887765 7999999999998 788888765 66654

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.95  E-value=3.7e-26  Score=206.97  Aligned_cols=180  Identities=21%  Similarity=0.226  Sum_probs=145.5

Q ss_pred             eecCCeEEEeeecCc-----cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC----CeEEEEEeCCCc
Q psy11015        153 KVQTSKIVSSFKTSL-----LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT----GKCVLQYSGHSG  223 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~-----~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~----~~~~~~~~~h~~  223 (360)
                      .+.....+..|....     ....++..+.+|.+.|++++|+|++++|++|+.|++|++||+..    .+++..+.+|..
T Consensus        75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~  154 (330)
T 2hes_X           75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ  154 (330)
T ss_dssp             EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred             EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence            344455556665532     23567888999999999999999999999999999999999943    367888999999


Q ss_pred             CeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC
Q psy11015        224 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  303 (360)
Q Consensus       224 ~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~  303 (360)
                      .|.+++|+|++.+|++|+.|++|++||+.++.                          ..++..+.+|...|.+++|+|+
T Consensus       155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~--------------------------~~~~~~~~~h~~~v~~~~~~~~  208 (330)
T 2hes_X          155 DVKHVIWHPSEALLASSSYDDTVRIWKDYDDD--------------------------WECVAVLNGHEGTVWSSDFDKT  208 (330)
T ss_dssp             CEEEEEECSSSSEEEEEETTSCEEEEEEETTE--------------------------EEEEEEECCCSSCEEEEEECCS
T ss_pred             ceEEEEECCCCCEEEEEcCCCeEEEEECCCCC--------------------------eeEEEEccCCCCcEEEEEecCC
Confidence            99999999999999999999999999986541                          1246778899999999999998


Q ss_pred             --CCEEEEEECCCcEEEEECCCC--------eEEEEEec-CCCceEEEEEcCCCCEEEcccccchh
Q psy11015        304 --GEQVITASWDRVANLFDVETG--------TILQSLTE-PGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       304 --g~~l~tgs~dg~i~iwd~~~~--------~~~~~l~~-h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                        +.+|++|+.||+|++||+.++        .+...+.. |...|++++|++++.+++.+.|+.||
T Consensus       209 ~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~  274 (330)
T 2hes_X          209 EGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLA  274 (330)
T ss_dssp             SSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEE
T ss_pred             CCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEE
Confidence              779999999999999998754        45556655 89999999999888777777777665

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.95  E-value=2.1e-25  Score=199.88  Aligned_cols=174  Identities=27%  Similarity=0.456  Sum_probs=152.6

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      +.....+..|..  ..+.....+.+|...|.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|.+++|+|+
T Consensus        41 ~~~dg~i~iw~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~  118 (312)
T 4ery_A           41 SSADKLIKIWGA--YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ  118 (312)
T ss_dssp             EETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred             eeCCCeEEEEeC--CCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence            344444555543  456678889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  313 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d  313 (360)
                      ++++++|+.|++|++||+.++                            ..+..+..|...|.+++|+|++.++++|+.|
T Consensus       119 ~~~l~s~~~d~~i~iwd~~~~----------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  170 (312)
T 4ery_A          119 SNLIVSGSFDESVRIWDVKTG----------------------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD  170 (312)
T ss_dssp             SSEEEEEETTSCEEEEETTTC----------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCEEEEEeCCCcEEEEECCCC----------------------------EEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence            999999999999999999866                            3456778899999999999999999999999


Q ss_pred             CcEEEEECCCCeEEEEEe-cCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        314 RVANLFDVETGTILQSLT-EPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       314 g~i~iwd~~~~~~~~~l~-~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      |.|++||+++++.+..+. .+...+..++|+|+|.+++++. ++.|
T Consensus       171 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i  216 (312)
T 4ery_A          171 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL  216 (312)
T ss_dssp             SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEE
T ss_pred             CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence            999999999999888775 4567899999999999888776 4444

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.95  E-value=7.7e-26  Score=204.41  Aligned_cols=191  Identities=19%  Similarity=0.203  Sum_probs=150.6

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCC-----eEEEEEeCCCcCeEEEEEeeCCCEEEEE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTG-----KCVLQYSGHSGSVNSVRFLPNKDLVLSA  240 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~-----~~~~~~~~h~~~v~~i~~~p~~~~l~s~  240 (360)
                      .....+..+|+||++.|++|+|+|+ +++|+|||.||+|+|||+.++     .+...+.+|...|.+++|+|++++|++|
T Consensus        25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~  104 (340)
T 4aow_A           25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG  104 (340)
T ss_dssp             -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence            3455677889999999999999997 579999999999999998754     4678899999999999999999999999


Q ss_pred             eCCCcEEEEEcccCeeEeeeCCCCCCC------------------CC--------------CCC-----------CC---
Q psy11015        241 SGDKSVHIWQAVINWECLVSNNDNDSD------------------LD--------------ESK-----------EP---  274 (360)
Q Consensus       241 s~d~~i~vwd~~~~~~~~~~~~~~~~~------------------~~--------------~~~-----------~~---  274 (360)
                      +.|+.|++|+.................                  ..              ...           ..   
T Consensus       105 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~  184 (340)
T 4aow_A          105 SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS  184 (340)
T ss_dssp             ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSS
T ss_pred             cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCC
Confidence            999999999987654433222110000                  00              000           00   


Q ss_pred             --------CCC-----ccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEE
Q psy11015        275 --------DES-----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA  341 (360)
Q Consensus       275 --------~~~-----~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~  341 (360)
                              .+.     ..........+.+|.+.|++++|+|+|++|++|+.||.|++||+++++.+..+..+ ..|.+++
T Consensus       185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~  263 (340)
T 4aow_A          185 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALC  263 (340)
T ss_dssp             SCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred             CcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeee
Confidence                    000     01122355677789999999999999999999999999999999999999988755 5799999


Q ss_pred             EcCCCCEEEcccccchh
Q psy11015        342 GRTGGPIRASPLLLAIR  358 (360)
Q Consensus       342 ~~~~g~~las~~~~~ir  358 (360)
                      |+|++.+++++.++.||
T Consensus       264 ~~~~~~~~~~~~d~~i~  280 (340)
T 4aow_A          264 FSPNRYWLCAATGPSIK  280 (340)
T ss_dssp             ECSSSSEEEEEETTEEE
T ss_pred             cCCCCceeeccCCCEEE
Confidence            99999999999887764

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.95  E-value=1.9e-25  Score=201.38  Aligned_cols=173  Identities=21%  Similarity=0.354  Sum_probs=150.6

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      +.....+..|..  .++..+..+.+|.+.|++++|+|++.+|++|+.|++|++||++ +.++..+.+|...|.+++|+|.
T Consensus        83 ~s~D~~v~~wd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~  159 (319)
T 3frx_A           83 ASWDKTLRLWDV--ATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPN  159 (319)
T ss_dssp             EETTSEEEEEET--TTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC
T ss_pred             EeCCCEEEEEEC--CCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccC
Confidence            333444444443  5667889999999999999999999999999999999999996 6678889999999999999985


Q ss_pred             ------CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE
Q psy11015        234 ------KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV  307 (360)
Q Consensus       234 ------~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l  307 (360)
                            +..+++++.|++|++||+.+.                            .....+.+|...|.+++|+|+|++|
T Consensus       160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~----------------------------~~~~~~~~h~~~v~~~~~sp~g~~l  211 (319)
T 3frx_A          160 EKADDDSVTIISAGNDKMVKAWNLNQF----------------------------QIEADFIGHNSNINTLTASPDGTLI  211 (319)
T ss_dssp             ------CCEEEEEETTSCEEEEETTTT----------------------------EEEEEECCCCSCEEEEEECTTSSEE
T ss_pred             CCCCCCccEEEEEeCCCEEEEEECCcc----------------------------hhheeecCCCCcEEEEEEcCCCCEE
Confidence                  448999999999999998765                            2456678999999999999999999


Q ss_pred             EEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        308 ITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       308 ~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      ++|+.||+|++||+.+++.+..+..+ ..|.+++|+|+|.+++++.+.+++
T Consensus       212 ~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~~i~  261 (319)
T 3frx_A          212 ASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATGIK  261 (319)
T ss_dssp             EEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETTEEE
T ss_pred             EEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCCCcE
Confidence            99999999999999999999999854 689999999999999998876653

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.95  E-value=2.6e-25  Score=203.41  Aligned_cols=177  Identities=16%  Similarity=0.227  Sum_probs=153.2

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC------eEEEEEeCCCcCe
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG------KCVLQYSGHSGSV  225 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~------~~~~~~~~h~~~v  225 (360)
                      +.+.....+.+|..  .++.....+..|...|.+++|+|++..|++|+.|+.+++|++...      .....+.+|.+.|
T Consensus        80 ~s~s~Dg~v~vWd~--~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v  157 (354)
T 2pbi_B           80 VSSSQDGKVIVWDS--FTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYL  157 (354)
T ss_dssp             EEEETTSEEEEEET--TTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCE
T ss_pred             EEEeCCCeEEEEEC--CCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcE
Confidence            44555555655653  455667788899999999999999999999999999999998643      3456778899999


Q ss_pred             EEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC--C
Q psy11015        226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--D  303 (360)
Q Consensus       226 ~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp--~  303 (360)
                      .+++|+|++..|++|+.|++|++||+.++                            .++..+.+|...|.+++|+|  +
T Consensus       158 ~~~~~~~~~~~l~t~s~D~~v~lwd~~~~----------------------------~~~~~~~~h~~~v~~~~~~~~~~  209 (354)
T 2pbi_B          158 SACSFTNSDMQILTASGDGTCALWDVESG----------------------------QLLQSFHGHGADVLCLDLAPSET  209 (354)
T ss_dssp             EEEEECSSSSEEEEEETTSEEEEEETTTC----------------------------CEEEEEECCSSCEEEEEECCCSS
T ss_pred             EEEEEeCCCCEEEEEeCCCcEEEEeCCCC----------------------------eEEEEEcCCCCCeEEEEEEeCCC
Confidence            99999999999999999999999999876                            35677889999999999987  5


Q ss_pred             CCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        304 GEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       304 g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |++|++|+.||+|++||+++++++..+.+|...|++++|+|+|.++++++ |+.||
T Consensus       210 g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~  265 (354)
T 2pbi_B          210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCR  265 (354)
T ss_dssp             CCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEE
Confidence            78999999999999999999999999999999999999999999998877 44443

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.95  E-value=9.7e-26  Score=221.01  Aligned_cols=168  Identities=23%  Similarity=0.306  Sum_probs=142.8

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      +....++.+|.+.|++++|+|++. .|++|+.|++|++||..+++++..+.+|.+.|++++|+|+|++|++|+.|++|++
T Consensus       137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l  216 (611)
T 1nr0_A          137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL  216 (611)
T ss_dssp             CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence            456678899999999999999987 6999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  328 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~  328 (360)
                      ||+.++........                     ......+|.+.|.+++|+|+|++|++|+.|++|++||+.+++++.
T Consensus       217 wd~~~g~~~~~~~~---------------------~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~  275 (611)
T 1nr0_A          217 YNGVDGTKTGVFED---------------------DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEK  275 (611)
T ss_dssp             EETTTCCEEEECBC---------------------TTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred             EECCCCcEeeeecc---------------------ccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee
Confidence            99887743321100                     000112799999999999999999999999999999999887654


Q ss_pred             E-------------------------------------------EecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        329 S-------------------------------------------LTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       329 ~-------------------------------------------l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +                                           +.+|...|++++|+|+|.++++++ |+.||
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~  349 (611)
T 1nr0_A          276 TIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHIN  349 (611)
T ss_dssp             EEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             eecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Confidence            3                                           347889999999999999998876 45443

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.94  E-value=5.1e-26  Score=210.11  Aligned_cols=190  Identities=18%  Similarity=0.181  Sum_probs=149.5

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      ...+.+++.||.+.|++++|+|++++|+||+.||+|+|||+.+++....+.+|...|.+++|+|+|+++++|+.|+.+++
T Consensus        55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i  134 (380)
T 3iz6_a           55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI  134 (380)
T ss_dssp             CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred             eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence            34567889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcccCeeE-------eeeCCCCCCCCCC----------CCCCCCCcc-----ccccceeEe-----eCCCCcEEEEEEc
Q psy11015        249 WQAVINWEC-------LVSNNDNDSDLDE----------SKEPDESSI-----TLRTPVKEL-----LGHSNVVIAADWL  301 (360)
Q Consensus       249 wd~~~~~~~-------~~~~~~~~~~~~~----------~~~~~~~~~-----~~~~~~~~~-----~~h~~~v~~i~~s  301 (360)
                      ||+.+....       .....+.......          .....+...     .....+..+     .+|...|.+++|+
T Consensus       135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~  214 (380)
T 3iz6_a          135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN  214 (380)
T ss_dssp             EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred             EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence            998753211       0011111111000          001111111     122333444     5789999999998


Q ss_pred             C-CCCEEEEEECCCcEEEEECC-CCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        302 S-DGEQVITASWDRVANLFDVE-TGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       302 p-~g~~l~tgs~dg~i~iwd~~-~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      | ++++|++|+.||+|++||++ .+..+..+.+|.+.|++++|+|+|.+++|++ |+.||
T Consensus       215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~  274 (380)
T 3iz6_a          215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCR  274 (380)
T ss_dssp             SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEE
T ss_pred             cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEE
Confidence            7 88999999999999999998 5678889999999999999999999998877 44443

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.94  E-value=9.2e-26  Score=203.12  Aligned_cols=208  Identities=20%  Similarity=0.205  Sum_probs=155.2

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCC--eEEEEEeCCCcCeE
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVN  226 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~~~h~~~v~  226 (360)
                      ...+.....+..|........++.++.+|.+.|++++|+|  ++.+|+||+.|++|++||++++  .++..+.+|.+.|.
T Consensus        28 lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~  107 (316)
T 3bg1_A           28 LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN  107 (316)
T ss_dssp             EEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC
T ss_pred             EEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE
Confidence            3445666677777765555567889999999999999986  3789999999999999999987  46778889999999


Q ss_pred             EEEEeeC--CCEEEEEeCCCcEEEEEcccCeeE--ee-eCCCCCCC--------------------------CCCCCCCC
Q psy11015        227 SVRFLPN--KDLVLSASGDKSVHIWQAVINWEC--LV-SNNDNDSD--------------------------LDESKEPD  275 (360)
Q Consensus       227 ~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~--~~-~~~~~~~~--------------------------~~~~~~~~  275 (360)
                      +++|+|+  +.+|++|+.|++|++||+..+...  .. ...+....                          ........
T Consensus       108 ~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~  187 (316)
T 3bg1_A          108 SVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGC  187 (316)
T ss_dssp             EEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBT
T ss_pred             EEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecC
Confidence            9999998  789999999999999999875321  11 11111000                          00111111


Q ss_pred             CCccccc--------cceeEeeCCCCcEEEEEEcCCC----CEEEEEECCCcEEEEECCCC---e-EEEEEecCCCceEE
Q psy11015        276 ESSITLR--------TPVKELLGHSNVVIAADWLSDG----EQVITASWDRVANLFDVETG---T-ILQSLTEPGEAIRA  339 (360)
Q Consensus       276 ~~~~~~~--------~~~~~~~~h~~~v~~i~~sp~g----~~l~tgs~dg~i~iwd~~~~---~-~~~~l~~h~~~v~~  339 (360)
                      +.....+        .+...+.+|...|.+++|+|++    .+|++|+.||+|++||+.+.   . ....+..|...|++
T Consensus       188 D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~  267 (316)
T 3bg1_A          188 DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWH  267 (316)
T ss_dssp             TSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEE
T ss_pred             CCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEE
Confidence            2221111        2456678999999999999986    89999999999999998762   1 22345678899999


Q ss_pred             EEEcCCCCEEEccc-ccchh
Q psy11015        340 AAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       340 ~~~~~~g~~las~~-~~~ir  358 (360)
                      ++|+|+|.+||++. |+.||
T Consensus       268 v~~sp~g~~las~~~D~~v~  287 (316)
T 3bg1_A          268 VSWSITANILAVSGGDNKVT  287 (316)
T ss_dssp             EEECTTTCCEEEEESSSCEE
T ss_pred             EEEcCCCCEEEEEcCCCeEE
Confidence            99999999888765 55554

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.94  E-value=1.9e-25  Score=216.82  Aligned_cols=160  Identities=32%  Similarity=0.542  Sum_probs=145.9

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ..++.+..+.+|...|++++|+|++.+|++++.|++|++||. +++.+..+.+|...|.+++|+|++++|++++.|++|+
T Consensus       414 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~  492 (577)
T 2ymu_A          414 RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK  492 (577)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred             CCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence            356788899999999999999999999999999999999996 5778889999999999999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +||.. +                            ..+..+.+|...|++++|+|+|++|++|+.||.|++||. +++++
T Consensus       493 iw~~~-~----------------------------~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~  542 (577)
T 2ymu_A          493 LWNRN-G----------------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL  542 (577)
T ss_dssp             EEETT-S----------------------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEE
T ss_pred             EEcCC-C----------------------------CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEE
Confidence            99953 2                            356778899999999999999999999999999999995 68899


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .++.+|...|++++|+|+|++|+|++ |+.||
T Consensus       543 ~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~  574 (577)
T 2ymu_A          543 QTLTGHSSSVWGVAFSPDGQTIASASSDKTVK  574 (577)
T ss_dssp             EEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred             EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence            99999999999999999999888765 66665

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.94  E-value=1.1e-25  Score=200.67  Aligned_cols=160  Identities=16%  Similarity=0.206  Sum_probs=137.0

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC--CeEEEEEeCCCcCeEEEEEee--CCCEEEEEeCCCcEEE
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--GKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHI  248 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~--~~~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~~i~v  248 (360)
                      +..+.+|.+.|++++|+|++++|+||+.|++|+|||+..  ++++..+.+|.+.|++++|+|  ++++|++|+.|++|++
T Consensus         2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i   81 (297)
T 2pm7_B            2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI   81 (297)
T ss_dssp             CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred             ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence            356789999999999999999999999999999999974  467889999999999999986  3899999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCe-
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT-  325 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~~-  325 (360)
                      ||+.++.                          ...+..+.+|...|.+++|+|+  |.+|++|+.||+|++||++++. 
T Consensus        82 Wd~~~~~--------------------------~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~  135 (297)
T 2pm7_B           82 WKEENGR--------------------------WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT  135 (297)
T ss_dssp             EEBSSSC--------------------------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC
T ss_pred             EEcCCCc--------------------------eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc
Confidence            9987652                          1235567789999999999997  8999999999999999998763 


Q ss_pred             -EEEEEecCCCceEEEEEcCC-------------CCEEEccc-ccchh
Q psy11015        326 -ILQSLTEPGEAIRAAAGRTG-------------GPIRASPL-LLAIR  358 (360)
Q Consensus       326 -~~~~l~~h~~~v~~~~~~~~-------------g~~las~~-~~~ir  358 (360)
                       ....+.+|...|.+++|+|+             +.++++++ |+.||
T Consensus       136 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~  183 (297)
T 2pm7_B          136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK  183 (297)
T ss_dssp             BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEE
T ss_pred             eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEE
Confidence             24567889999999999997             45777665 55554

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.94  E-value=2.8e-25  Score=202.22  Aligned_cols=160  Identities=23%  Similarity=0.293  Sum_probs=137.9

Q ss_pred             eeeeeeeecCCCCEEEEEE-----CC-CCCEEEEEeCCCcEEEEECCC-------CeEEEEEeCCCcCeEEEEEeeCCCE
Q psy11015        170 CYKIRSFSGHRDGVWDVAV-----RP-GQPVLGSASADRTVRLWSTQT-------GKCVLQYSGHSGSVNSVRFLPNKDL  236 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~-----~~-~~~~l~sgs~Dg~v~iwd~~~-------~~~~~~~~~h~~~v~~i~~~p~~~~  236 (360)
                      ..+..++.||.+.|++++|     ++ ++++|+||+.|++|++||+..       +.+...+.+|...|.+++|+|++.+
T Consensus        11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~   90 (343)
T 2xzm_R           11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF   90 (343)
T ss_dssp             EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred             eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence            3567789999999999999     76 889999999999999999874       3567789999999999999999999


Q ss_pred             EEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcE
Q psy11015        237 VLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA  316 (360)
Q Consensus       237 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i  316 (360)
                      +++|+.|++|++||+.++                            ..+..+.+|...|.+++|+|++++|++|+.||+|
T Consensus        91 l~s~s~D~~v~lwd~~~~----------------------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i  142 (343)
T 2xzm_R           91 AISSSWDKTLRLWDLRTG----------------------------TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREI  142 (343)
T ss_dssp             EEEEETTSEEEEEETTSS----------------------------CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCE
T ss_pred             EEEEcCCCcEEEEECCCC----------------------------cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEE
Confidence            999999999999999876                            3466788999999999999999999999999999


Q ss_pred             EEEECCCCeEEEEEe---cCCCceEEEEEcCCC----------CEEEccc-ccchh
Q psy11015        317 NLFDVETGTILQSLT---EPGEAIRAAAGRTGG----------PIRASPL-LLAIR  358 (360)
Q Consensus       317 ~iwd~~~~~~~~~l~---~h~~~v~~~~~~~~g----------~~las~~-~~~ir  358 (360)
                      ++||+.. .......   .|...|.+++|+|++          .++++++ |+.||
T Consensus       143 ~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~  197 (343)
T 2xzm_R          143 KLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK  197 (343)
T ss_dssp             EEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred             EEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence            9999984 3444443   688899999999987          5666655 55543

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.94  E-value=8.4e-26  Score=208.65  Aligned_cols=171  Identities=20%  Similarity=0.328  Sum_probs=142.5

Q ss_pred             ccceeeeeee-----ecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECC-CCeEEEEEeCCCcCeEEEEEeeCCCEEEE
Q psy11015        167 LLSCYKIRSF-----SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLS  239 (360)
Q Consensus       167 ~~~~~~~~~l-----~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~-~~~~~~~~~~h~~~v~~i~~~p~~~~l~s  239 (360)
                      ..++..+..+     .+|...|.+++|++ ++.+|++|+.||+|++||++ .+.++..+.+|.+.|.+++|+|++.+|++
T Consensus       187 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s  266 (380)
T 3iz6_a          187 VTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGT  266 (380)
T ss_dssp             TTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEE
T ss_pred             cCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEE
Confidence            3455566666     68999999999987 78899999999999999998 55788999999999999999999999999


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEE
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF  319 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iw  319 (360)
                      |+.|++|++||++++.....+....                     .....+...|++++|+|+|++|++|+.||.|++|
T Consensus       267 ~s~D~~i~lwd~~~~~~~~~~~~~~---------------------~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw  325 (380)
T 3iz6_a          267 GSDDGTCRLFDMRTGHQLQVYNREP---------------------DRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW  325 (380)
T ss_dssp             ECSSSCEEEEETTTTEEEEEECCCC---------------------SSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred             EcCCCeEEEEECCCCcEEEEecccc---------------------cccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence            9999999999999875443321100                     0011233458899999999999999999999999


Q ss_pred             ECCCCeEEEEE----ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        320 DVETGTILQSL----TEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       320 d~~~~~~~~~l----~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |+.+++.+..+    .+|.+.|++++|+|+|.+++|++ |+.||
T Consensus       326 d~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~  369 (380)
T 3iz6_a          326 DTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK  369 (380)
T ss_dssp             ETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred             ECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence            99999988887    67999999999999999999887 55554

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.94  E-value=1.5e-25  Score=208.26  Aligned_cols=172  Identities=23%  Similarity=0.343  Sum_probs=150.5

Q ss_pred             eecCCeEEEeeecCccc--eeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCC-------eEEEEEeCCC
Q psy11015        153 KVQTSKIVSSFKTSLLS--CYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG-------KCVLQYSGHS  222 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~--~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~-------~~~~~~~~h~  222 (360)
                      .+..+..+.+|......  ...+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++       .++..+.+|.
T Consensus        52 ~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~  131 (402)
T 2aq5_A           52 EASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT  131 (402)
T ss_dssp             CCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred             EEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC
Confidence            34556667777754322  135667889999999999999 8999999999999999999987       6788999999


Q ss_pred             cCeEEEEEeeCC-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe--eCCCCcEEEEE
Q psy11015        223 GSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAAD  299 (360)
Q Consensus       223 ~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~i~  299 (360)
                      ..|.+++|+|++ .+|++|+.|++|++||+.++.                            .+..+  .+|...|.+++
T Consensus       132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~----------------------------~~~~~~~~~~~~~v~~~~  183 (402)
T 2aq5_A          132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA----------------------------AVLTLGPDVHPDTIYSVD  183 (402)
T ss_dssp             SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE----------------------------EEEEECTTTCCSCEEEEE
T ss_pred             CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC----------------------------ccEEEecCCCCCceEEEE
Confidence            999999999998 699999999999999998763                            35556  68999999999


Q ss_pred             EcCCCCEEEEEECCCcEEEEECCCCeEEEEE-ecCCCc-eEEEEEcCCCCEEEcc
Q psy11015        300 WLSDGEQVITASWDRVANLFDVETGTILQSL-TEPGEA-IRAAAGRTGGPIRASP  352 (360)
Q Consensus       300 ~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l-~~h~~~-v~~~~~~~~g~~las~  352 (360)
                      |+|+|++|++|+.||.|++||+++++.+..+ ..|.+. +.+++|+|+|.+++++
T Consensus       184 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  238 (402)
T 2aq5_A          184 WSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG  238 (402)
T ss_dssp             ECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred             ECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence            9999999999999999999999999999998 678765 8999999999999987

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.94  E-value=3.7e-25  Score=219.98  Aligned_cols=183  Identities=21%  Similarity=0.303  Sum_probs=156.5

Q ss_pred             eeeecCCeEEEeeecCc---cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEE
Q psy11015        151 KLKVQTSKIVSSFKTSL---LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS  227 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~  227 (360)
                      ...+...+.+..|....   ..+...+.+.+|.+.|.+++|+|++++|+||+.||+|+|||+.++.++..+.+|.+.|.+
T Consensus       398 l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~  477 (694)
T 3dm0_A          398 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS  477 (694)
T ss_dssp             EEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred             EEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEE
Confidence            34566666777776543   234567889999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC--C
Q psy11015        228 VRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--E  305 (360)
Q Consensus       228 i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g--~  305 (360)
                      ++|+|++++|++|+.|++|++||+.......                         ......+|...|.+++|+|++  .
T Consensus       478 ~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~-------------------------~~~~~~~h~~~v~~~~~~~~~~~~  532 (694)
T 3dm0_A          478 VAFSLDNRQIVSASRDRTIKLWNTLGECKYT-------------------------ISEGGEGHRDWVSCVRFSPNTLQP  532 (694)
T ss_dssp             EEECTTSSCEEEEETTSCEEEECTTSCEEEE-------------------------ECSSTTSCSSCEEEEEECSCSSSC
T ss_pred             EEEeCCCCEEEEEeCCCEEEEEECCCCccee-------------------------eccCCCCCCCcEEEEEEeCCCCcc
Confidence            9999999999999999999999976431111                         111224788999999999987  5


Q ss_pred             EEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        306 QVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       306 ~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .+++|+.||+|++||++++++...+.+|.+.|++++|+|+|.++++++ |+.||
T Consensus       533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~  586 (694)
T 3dm0_A          533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL  586 (694)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCE
T ss_pred             eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence            899999999999999999999999999999999999999999998876 55554

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.94  E-value=4.5e-25  Score=216.32  Aligned_cols=203  Identities=19%  Similarity=0.209  Sum_probs=160.3

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-------CCCcCeE
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-------GHSGSVN  226 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-------~h~~~v~  226 (360)
                      +.....+..|.  ...++++.++.+|.+.|++++|+|++.+|+||+.|++|++||+.+++++..+.       +|.+.|.
T Consensus       166 ~s~D~~v~lwd--~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~  243 (611)
T 1nr0_A          166 GSDDNTVAIFE--GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF  243 (611)
T ss_dssp             EETTSCEEEEE--TTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred             EeCCCeEEEEE--CCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence            33344444454  34567888999999999999999999999999999999999999999988884       7999999


Q ss_pred             EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCC----------CCCCCCCCC-----ccccccceeEeeCC
Q psy11015        227 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDL----------DESKEPDES-----SITLRTPVKELLGH  291 (360)
Q Consensus       227 ~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-----~~~~~~~~~~~~~h  291 (360)
                      +++|+|+|++|++|+.|++|++||+.++..............          .......+.     ......+...+.+|
T Consensus       244 ~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh  323 (611)
T 1nr0_A          244 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGH  323 (611)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred             EEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCC
Confidence            999999999999999999999999998866554332110000          000000000     01112345667899


Q ss_pred             CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE-ecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        292 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-TEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       292 ~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l-~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      ...|++++|+|+|++|++|+.||+|++||+.++.+...+ .+|...|.+++|++++.+++.+.|..+|
T Consensus       324 ~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~  391 (611)
T 1nr0_A          324 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLK  391 (611)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEE
T ss_pred             CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceE
Confidence            999999999999999999999999999999999887766 5699999999999999888887777654

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.94  E-value=3.4e-25  Score=203.53  Aligned_cols=175  Identities=16%  Similarity=0.140  Sum_probs=143.2

Q ss_pred             CCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE--EEeCCCcCeEEEEEeeC
Q psy11015        156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~  233 (360)
                      ....+.+|..  .++.++.++. |.+.|++++|+|+|.++++++.| .+++|+..++..+.  ...+|...|.+++|+|+
T Consensus       155 ~d~~i~iwd~--~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd  230 (365)
T 4h5i_A          155 VPAIMRIIDP--SDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIAD  230 (365)
T ss_dssp             SSCEEEEEET--TTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEET
T ss_pred             CCCEEEEeEC--CCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCC
Confidence            3455555654  4556666665 77899999999999999999855 56667777776554  34568889999999999


Q ss_pred             CCEEEEEeCCC----cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        234 KDLVLSASGDK----SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       234 ~~~l~s~s~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      +.++++++.|+    ++++|++.......                        .....+.+|...|++++|+|+|++||+
T Consensus       231 g~~l~~~s~d~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~~~~V~~~~~Spdg~~las  286 (365)
T 4h5i_A          231 DTVLIAASLKKGKGIVLTKISIKSGNTSV------------------------LRSKQVTNRFKGITSMDVDMKGELAVL  286 (365)
T ss_dssp             TEEEEEEEESSSCCEEEEEEEEETTEEEE------------------------EEEEEEESSCSCEEEEEECTTSCEEEE
T ss_pred             CCEEEEEecCCcceeEEeecccccceecc------------------------eeeeeecCCCCCeEeEEECCCCCceEE
Confidence            99999999887    58889877653321                        135667889999999999999999999


Q ss_pred             EECCCcEEEEECCCCeEEEEE-ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        310 ASWDRVANLFDVETGTILQSL-TEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~~~~l-~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |+.||+|+|||+.+++++..+ .+|..+|++++|+|+|++|||++ |++||
T Consensus       287 gs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvr  337 (365)
T 4h5i_A          287 ASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIH  337 (365)
T ss_dssp             EETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred             EcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEE
Confidence            999999999999999999886 68999999999999999999876 66665

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.94  E-value=3.9e-25  Score=201.49  Aligned_cols=203  Identities=16%  Similarity=0.175  Sum_probs=157.4

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE-
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF-  230 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~-  230 (360)
                      +.+..+..+..|............+.+|.+.|++++|+|++.+|++|+.||.|++||+.+++.+. +.+|.+.|.+++| 
T Consensus        58 ~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~  136 (368)
T 3mmy_A           58 IAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWI  136 (368)
T ss_dssp             EEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEE
T ss_pred             EEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEE
Confidence            34455566667776654455558899999999999999999999999999999999999998776 4559999999999 


Q ss_pred             -eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC----------------------------------------CC
Q psy11015        231 -LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSD----------------------------------------LD  269 (360)
Q Consensus       231 -~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~----------------------------------------~~  269 (360)
                       +|++.+|++++.|+.|++||++++........+....                                        ..
T Consensus       137 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  216 (368)
T 3mmy_A          137 KAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHR  216 (368)
T ss_dssp             ECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEE
T ss_pred             eCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCc
Confidence             8899999999999999999998775443332221000                                        00


Q ss_pred             --------------CCCCCCCCccccc--------cceeEeeCCCC------------cEEEEEEcCCCCEEEEEECCCc
Q psy11015        270 --------------ESKEPDESSITLR--------TPVKELLGHSN------------VVIAADWLSDGEQVITASWDRV  315 (360)
Q Consensus       270 --------------~~~~~~~~~~~~~--------~~~~~~~~h~~------------~v~~i~~sp~g~~l~tgs~dg~  315 (360)
                                    ......+.....+        .....+.+|..            .|++++|+|++++|++|+.||.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~  296 (368)
T 3mmy_A          217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR  296 (368)
T ss_dssp             EEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC
T ss_pred             eEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe
Confidence                          0000001100110        34456667765            6999999999999999999999


Q ss_pred             EEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        316 ANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       316 i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      |++||+.+++++..+..|..+|++++|+|+|.++++++..
T Consensus       297 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d  336 (368)
T 3mmy_A          297 FSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSY  336 (368)
T ss_dssp             EEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred             EEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence            9999999999999999999999999999999998888643

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.94  E-value=1.2e-24  Score=201.82  Aligned_cols=148  Identities=24%  Similarity=0.409  Sum_probs=132.7

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      .|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||+.++..     
T Consensus       125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~-----  199 (393)
T 1erj_A          125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC-----  199 (393)
T ss_dssp             BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----
T ss_pred             eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee-----
Confidence            499999999999999999999999999999999999999999999999999999999999999999999987732     


Q ss_pred             CCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEE-------ecC
Q psy11015        262 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSL-------TEP  333 (360)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l-------~~h  333 (360)
                                             ...+. +...+.+++|+| +|++|++|+.||.|++||++++..+..+       .+|
T Consensus       200 -----------------------~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h  255 (393)
T 1erj_A          200 -----------------------SLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH  255 (393)
T ss_dssp             -----------------------EEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCC
T ss_pred             -----------------------EEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCC
Confidence                                   22332 556799999999 8999999999999999999999988777       578


Q ss_pred             CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        334 GEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ...|++++|+|+|.++++++ |+.||
T Consensus       256 ~~~v~~v~~~~~g~~l~s~s~d~~v~  281 (393)
T 1erj_A          256 KDSVYSVVFTRDGQSVVSGSLDRSVK  281 (393)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             CCCEEEEEECCCCCEEEEEeCCCEEE
Confidence            99999999999999888876 55443

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.94  E-value=1.1e-24  Score=196.39  Aligned_cols=207  Identities=18%  Similarity=0.204  Sum_probs=158.2

Q ss_pred             eeecCCeEEEeeecCcc--ceeeeeeeecCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCC---------eEEEEE
Q psy11015        152 LKVQTSKIVSSFKTSLL--SCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTG---------KCVLQY  218 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~---------~~~~~~  218 (360)
                      +.+..+..+..|.....  ....+..+.+|.+.|++++|+|  ++.+|++|+.||+|++||+.++         +++..+
T Consensus        27 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~  106 (351)
T 3f3f_A           27 ATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL  106 (351)
T ss_dssp             EEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred             EEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeee
Confidence            34555666777776543  3467888999999999999999  5899999999999999999887         678889


Q ss_pred             eCCCcCeEEEEEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCC-------------CCCCCCCCCCCC---------
Q psy11015        219 SGHSGSVNSVRFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNN-------------DNDSDLDESKEP---------  274 (360)
Q Consensus       219 ~~h~~~v~~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-------------~~~~~~~~~~~~---------  274 (360)
                      .+|.+.|.+++|+|+  +.++++++.|+.|++||+.++........             +..........+         
T Consensus       107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~  186 (351)
T 3f3f_A          107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA  186 (351)
T ss_dssp             CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred             cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence            999999999999999  99999999999999999987643221110             000000000000         


Q ss_pred             ---CCCc-------cccccceeEeeCCCCcEEEEEEcCCC----CEEEEEECCCcEEEEECCCC----------------
Q psy11015        275 ---DESS-------ITLRTPVKELLGHSNVVIAADWLSDG----EQVITASWDRVANLFDVETG----------------  324 (360)
Q Consensus       275 ---~~~~-------~~~~~~~~~~~~h~~~v~~i~~sp~g----~~l~tgs~dg~i~iwd~~~~----------------  324 (360)
                         ....       .........+.+|...|++++|+|++    ++|++|+.||.|++||++++                
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  266 (351)
T 3f3f_A          187 VSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF  266 (351)
T ss_dssp             EEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred             EecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence               0000       00111356677899999999999998    89999999999999999875                


Q ss_pred             ------------------------------eEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        325 ------------------------------TILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       325 ------------------------------~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                                                    ..+..+.+|...|++++|+|+|+++++++ |+.||
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~  331 (351)
T 3f3f_A          267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVR  331 (351)
T ss_dssp             ------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred             CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEE
Confidence                                          67788889999999999999999888776 55453

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.94  E-value=1.6e-24  Score=200.90  Aligned_cols=180  Identities=21%  Similarity=0.355  Sum_probs=146.2

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee-
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-  232 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p-  232 (360)
                      +..+..+..|..  .++..+..+.+|.+.|++++|+|++..|++|+.|++|++||+.++++...+. +...+.+++|+| 
T Consensus       141 ~~~d~~i~iwd~--~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~  217 (393)
T 1erj_A          141 GAEDRLIRIWDI--ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG  217 (393)
T ss_dssp             EETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred             EcCCCeEEEEEC--CCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence            334444444543  4567888999999999999999999999999999999999999999988887 667899999999 


Q ss_pred             CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015        233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  312 (360)
Q Consensus       233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~  312 (360)
                      ++.++++|+.|++|++||+.++.......                     .......+|...|.+++|+|+|++|++|+.
T Consensus       218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~---------------------~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~  276 (393)
T 1erj_A          218 DGKYIAAGSLDRAVRVWDSETGFLVERLD---------------------SENESGTGHKDSVYSVVFTRDGQSVVSGSL  276 (393)
T ss_dssp             TCCEEEEEETTSCEEEEETTTCCEEEEEC---------------------------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred             CCCEEEEEcCCCcEEEEECCCCcEEEeec---------------------ccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence            89999999999999999998774332210                     111223579999999999999999999999


Q ss_pred             CCcEEEEECCC------------CeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        313 DRVANLFDVET------------GTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       313 dg~i~iwd~~~------------~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      ||+|++||+++            +.+...+.+|...|.+++|+|++.++++++ |+.|
T Consensus       277 d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v  334 (393)
T 1erj_A          277 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV  334 (393)
T ss_dssp             TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred             CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE
Confidence            99999999975            345667889999999999999999988876 4444

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.94  E-value=2.7e-25  Score=202.53  Aligned_cols=181  Identities=14%  Similarity=0.156  Sum_probs=139.1

Q ss_pred             ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEE----EeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015        177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ----YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~----~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~  252 (360)
                      ..|...|.+++|+|++ .|++|+.||+|+|||+.+++++..    +.+|.+.|++++|+|+|++|++|+.|++|++||+.
T Consensus        79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~  157 (344)
T 4gqb_B           79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA  157 (344)
T ss_dssp             EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence            4567889999999986 788999999999999998865443    45899999999999999999999999999999999


Q ss_pred             cCeeEeeeCCCCCCCCCCCC----------CCCCCc-----cccccceeEee--CCCCcEEEEEEcCC-CCEEEEEECCC
Q psy11015        253 INWECLVSNNDNDSDLDESK----------EPDESS-----ITLRTPVKELL--GHSNVVIAADWLSD-GEQVITASWDR  314 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~-----~~~~~~~~~~~--~h~~~v~~i~~sp~-g~~l~tgs~dg  314 (360)
                      ++.....+..+.........          ...+..     .....+...+.  .|...+.+++|+|+ +++|++|+.||
T Consensus       158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg  237 (344)
T 4gqb_B          158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG  237 (344)
T ss_dssp             TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred             CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence            99877766655332211111          111111     12233444443  45567999999995 57889999999


Q ss_pred             cEEEEECCCCeEEEEEecCCCceEEEEEcCCC-CEEEccc-ccchh
Q psy11015        315 VANLFDVETGTILQSLTEPGEAIRAAAGRTGG-PIRASPL-LLAIR  358 (360)
Q Consensus       315 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g-~~las~~-~~~ir  358 (360)
                      +|++||+++++++.++.+|...|++++|+|+| .++||++ |+.||
T Consensus       238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~  283 (344)
T 4gqb_B          238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLA  283 (344)
T ss_dssp             EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred             cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence            99999999999999999999999999999998 5777664 66654

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.93  E-value=7.3e-26  Score=208.04  Aligned_cols=179  Identities=17%  Similarity=0.169  Sum_probs=143.6

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEeCCCcCeEEEEE
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~~h~~~v~~i~~  230 (360)
                      +..+..+..|.........+..+.+|.+.|++++|+|++++|++|+.||+|++||+.++.   +...+.+|...|.+++|
T Consensus        29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~  108 (377)
T 3dwl_C           29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW  108 (377)
T ss_dssp             CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEEC
T ss_pred             ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEE
Confidence            334445555655544447888999999999999999999999999999999999999877   77788899999999999


Q ss_pred             eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEE
Q psy11015        231 LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       231 ~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~t  309 (360)
                      +|++++|++|+.|++|++||+.++..                         ......+.+ |...|.+++|+|++++|++
T Consensus       109 ~~~~~~l~~~~~d~~i~iwd~~~~~~-------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~  163 (377)
T 3dwl_C          109 SPNEDKFAVGSGARVISVCYFEQEND-------------------------WWVSKHLKRPLRSTILSLDWHPNNVLLAA  163 (377)
T ss_dssp             CTTSSCCEEEESSSCEEECCC------------------------------CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred             CCCCCEEEEEecCCeEEEEEECCccc-------------------------ceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence            99999999999999999999886621                         113556666 9999999999999999999


Q ss_pred             EECCCcEEEEECC------------------CCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        310 ASWDRVANLFDVE------------------TGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       310 gs~dg~i~iwd~~------------------~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |+.||.|++||+.                  .++++..+ +|...|++++|+|+|.+++++. |+.||
T Consensus       164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~  230 (377)
T 3dwl_C          164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVT  230 (377)
T ss_dssp             EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC
T ss_pred             EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEE
Confidence            9999999999985                  46677777 8999999999999999888775 54554

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.93  E-value=1.9e-25  Score=205.30  Aligned_cols=192  Identities=11%  Similarity=0.055  Sum_probs=147.4

Q ss_pred             cCCeEEEeeecCccc-eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEeC-CCcCeEEEE
Q psy11015        155 QTSKIVSSFKTSLLS-CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSG-HSGSVNSVR  229 (360)
Q Consensus       155 ~~~~~~~~~~~~~~~-~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~~-h~~~v~~i~  229 (360)
                      ..+..+..|...... ......+.+|.+.|++++|+|++.+|++|+.|++|++||++++.   +...+.+ |.+.|.+++
T Consensus        74 s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~  153 (377)
T 3dwl_C           74 SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLD  153 (377)
T ss_dssp             ETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred             eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence            334444445444333 34677888999999999999999999999999999999999886   4778888 999999999


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      |+|++++|++|+.|++|++||+..+.....          ..............++..+ +|...|.+++|+|+|++|++
T Consensus       154 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~  222 (377)
T 3dwl_C          154 WHPNNVLLAAGCADRKAYVLSAYVRDVDAK----------PEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAY  222 (377)
T ss_dssp             ECTTSSEEEEEESSSCEEEEEECCSSCC-C----------CCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEE
T ss_pred             EcCCCCEEEEEeCCCEEEEEEEEecccCCC----------ccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEE
Confidence            999999999999999999999865421100          0000011111233455566 89999999999999999999


Q ss_pred             EECCCcEEEEECCCCeE----EEEEecCCCceEEEEEcCCCCEEEcccccch
Q psy11015        310 ASWDRVANLFDVETGTI----LQSLTEPGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~----~~~l~~h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      |+.||.|++||+.++..    +..+.+|..+|++++|+|+|.+++++.+..+
T Consensus       223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~  274 (377)
T 3dwl_C          223 AGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSP  274 (377)
T ss_dssp             EETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSE
T ss_pred             EeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE
Confidence            99999999999999887    7888999999999999999999999987654

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.93  E-value=3.1e-25  Score=208.46  Aligned_cols=177  Identities=14%  Similarity=0.027  Sum_probs=146.5

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeC--CCcCeEEEE
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSG--HSGSVNSVR  229 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~--h~~~v~~i~  229 (360)
                      .|..++.+.+|+...........+.+|.+.|++|+|+| ++.+|+|||.||+|++||++++........  +...+.+++
T Consensus       137 sGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~  216 (435)
T 4e54_B          137 VGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLD  216 (435)
T ss_dssp             EEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEE
T ss_pred             EEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEE
Confidence            45666777788877777777778899999999999998 678999999999999999987655444433  334578999


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVI  308 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~  308 (360)
                      |+|++.+|++|+.||+|++||+...                             .+..+.+|...|.+++|+|++. +++
T Consensus       217 ~~~~~~~l~~g~~dg~i~~wd~~~~-----------------------------~~~~~~~h~~~v~~v~~~p~~~~~~~  267 (435)
T 4e54_B          217 VSASSRMVVTGDNVGNVILLNMDGK-----------------------------ELWNLRMHKKKVTHVALNPCCDWFLA  267 (435)
T ss_dssp             EETTTTEEEEECSSSBEEEEESSSC-----------------------------BCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred             ECCCCCEEEEEeCCCcEeeeccCcc-----------------------------eeEEEecccceEEeeeecCCCceEEE
Confidence            9999999999999999999998643                             4556778999999999999886 788


Q ss_pred             EEECCCcEEEEECCCCeEEEEE---ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        309 TASWDRVANLFDVETGTILQSL---TEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       309 tgs~dg~i~iwd~~~~~~~~~l---~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +|+.||.|++||+++++....+   .+|...|++++|+|+|.+|+|++ |+.||
T Consensus       268 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~  321 (435)
T 4e54_B          268 TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIR  321 (435)
T ss_dssp             EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEE
T ss_pred             EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEE
Confidence            9999999999999887654333   57899999999999999888776 45443

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.93  E-value=2.2e-25  Score=213.68  Aligned_cols=157  Identities=9%  Similarity=-0.044  Sum_probs=135.8

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeEEE--EEeeCC-CEEEEEeCCCcEEE
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSV--RFLPNK-DLVLSASGDKSVHI  248 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~~i--~~~p~~-~~l~s~s~d~~i~v  248 (360)
                      ..++.+|.+.|++++|++++ .|++|+.||+|++||++++ .+...+.+|.+.|.+|  .|+|+| .+|+|||.|++|+|
T Consensus       259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl  337 (524)
T 2j04_B          259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI  337 (524)
T ss_dssp             SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE
T ss_pred             eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE
Confidence            35788999999999999865 8999999999999999976 4566789999999999  567887 89999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC--cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVITASWDRVANLFDVETGTI  326 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~  326 (360)
                      ||++++                            .+...+.+|..  .|.+++|+|++..+++++.|++|++||++++.+
T Consensus       338 WD~~~~----------------------------~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~  389 (524)
T 2j04_B          338 FNPKDI----------------------------ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA  389 (524)
T ss_dssp             ECGGGH----------------------------HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC
T ss_pred             EECCCC----------------------------CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc
Confidence            999865                            23344555543  578999999999999999999999999999998


Q ss_pred             EEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        327 LQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       327 ~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +.++.+|.+.|++++|+|+|++++|++ |+.||
T Consensus       390 ~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~  422 (524)
T 2j04_B          390 VHPLVSRETTITAIGVSRLHPMVLAGSADGSLI  422 (524)
T ss_dssp             CEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred             ceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence            889999999999999999999888776 55554

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.93  E-value=1.5e-24  Score=193.20  Aligned_cols=165  Identities=10%  Similarity=-0.072  Sum_probs=127.9

Q ss_pred             cceeeeeeeecCCCCEEEEEECC---CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC---cCeEEEEEeeCCCEE----
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRP---GQPVLGSASADRTVRLWSTQTGKCVLQYSGHS---GSVNSVRFLPNKDLV----  237 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~---~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~---~~v~~i~~~p~~~~l----  237 (360)
                      ..++.+..+.+|...+..++|++   ++..|+|||.|++|+|||+.+|++++++.+|.   ..+.+++|+|+|.++    
T Consensus       166 ~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s  245 (356)
T 2w18_A          166 EDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLS  245 (356)
T ss_dssp             TTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred             CCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence            34667777778888888888887   66899999999999999999999999998754   368888999999876    


Q ss_pred             --------EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeE-eeCCCCcEEEEEEcCCCCEEE
Q psy11015        238 --------LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWLSDGEQVI  308 (360)
Q Consensus       238 --------~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~sp~g~~l~  308 (360)
                              ++|+.|++|++||..++......                        ... -.+|...+.+.++  ++.+++
T Consensus       246 ~~~~~w~laSGs~D~tIklWd~~tgk~l~v~------------------------~~~~p~Gh~~~~lsg~~--sg~~lA  299 (356)
T 2w18_A          246 HPCAKESESLRSPVFQLIVINPKTTLSVGVM------------------------LYCLPPGQAGRFLEGDV--KDHCAA  299 (356)
T ss_dssp             ------------CCEEEEEEETTTTEEEEEE------------------------EECCCTTCCCCEEEEEE--ETTEEE
T ss_pred             cCCCcceeeccCCCcEEEEEECCCCEEEEEE------------------------EeeccCCCcceeEcccc--CCCEEE
Confidence                    56888999999999887443210                        000 1366666555555  488999


Q ss_pred             EEECCCcEEEEECCCCeEEEEEecCCCceE-EEEEcCCCCEEEccc-ccchh
Q psy11015        309 TASWDRVANLFDVETGTILQSLTEPGEAIR-AAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       309 tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~-~~~~~~~g~~las~~-~~~ir  358 (360)
                      +|+.||+|+|||+.+|++++++.+|...+. .++|+|+|++++|++ |++||
T Consensus       300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIk  351 (356)
T 2w18_A          300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIF  351 (356)
T ss_dssp             EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEE
T ss_pred             EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEE
Confidence            999999999999999999999999887655 589999999998877 55665

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.93  E-value=5e-24  Score=206.73  Aligned_cols=160  Identities=32%  Similarity=0.503  Sum_probs=145.3

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      .++.++..+.+|...|.+++|+|++++|++|+.|+.|++||. +++.+..+.+|...|.+++|+|+++++++++.|++|+
T Consensus       373 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~  451 (577)
T 2ymu_A          373 RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVK  451 (577)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             CCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEE
Confidence            356778899999999999999999999999999999999995 5788899999999999999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +||...                             ..+..+.+|...|.+++|+|+|++|++++.|+.|++||. +++++
T Consensus       452 ~w~~~~-----------------------------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~  501 (577)
T 2ymu_A          452 LWNRNG-----------------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL  501 (577)
T ss_dssp             EEETTS-----------------------------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEE
T ss_pred             EEECCC-----------------------------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEE
Confidence            999643                             246678899999999999999999999999999999994 78899


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ..+.+|...|++++|+|+|++||++. |+.||
T Consensus       502 ~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~  533 (577)
T 2ymu_A          502 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVK  533 (577)
T ss_dssp             EEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred             EEEeCCCCCEEEEEEcCCCCEEEEEECcCEEE
Confidence            99999999999999999999988876 44454

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=5.9e-24  Score=194.59  Aligned_cols=179  Identities=23%  Similarity=0.305  Sum_probs=155.0

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEE
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSV  228 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i  228 (360)
                      .+..+..+.+|......+..+..+.+|.+.|++++|+++  +.+|++|+.||.|++||+.+++  .+..+.+|...|.++
T Consensus        28 ~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~  107 (379)
T 3jrp_A           28 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSV  107 (379)
T ss_dssp             EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred             EEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence            445566677777776788899999999999999999987  8999999999999999999987  788888999999999


Q ss_pred             EEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC----
Q psy11015        229 RFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS----  302 (360)
Q Consensus       229 ~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp----  302 (360)
                      +|+|+  +.++++++.|+.|++||+..+..                          .....+.+|...|.+++|+|    
T Consensus       108 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~  161 (379)
T 3jrp_A          108 QWAPHEYGPLLLVASSDGKVSVVEFKENGT--------------------------TSPIIIDAHAIGVNSASWAPATIE  161 (379)
T ss_dssp             EECCGGGCSEEEEEETTSEEEEEECCTTSC--------------------------CCEEEEECCTTCEEEEEECCCC--
T ss_pred             EeCCCCCCCEEEEecCCCcEEEEecCCCCc--------------------------eeeEEecCCCCceEEEEEcCcccc
Confidence            99999  99999999999999999986521                          13445678999999999999    


Q ss_pred             ---------CCCEEEEEECCCcEEEEECCCCe----EEEEEecCCCceEEEEEcCC---CCEEEccc-ccch
Q psy11015        303 ---------DGEQVITASWDRVANLFDVETGT----ILQSLTEPGEAIRAAAGRTG---GPIRASPL-LLAI  357 (360)
Q Consensus       303 ---------~g~~l~tgs~dg~i~iwd~~~~~----~~~~l~~h~~~v~~~~~~~~---g~~las~~-~~~i  357 (360)
                               ++.++++|+.||.|++||++++.    .+..+.+|...|++++|+|+   +.+++++. ++.|
T Consensus       162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i  233 (379)
T 3jrp_A          162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC  233 (379)
T ss_dssp             --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred             ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEE
Confidence                     69999999999999999998653    55678889999999999999   88888776 4444

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.93  E-value=7.3e-24  Score=193.09  Aligned_cols=188  Identities=18%  Similarity=0.222  Sum_probs=152.3

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      .......+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.|++|++
T Consensus        21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i  100 (369)
T 3zwl_B           21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL  100 (369)
T ss_dssp             CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred             cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence            34556778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCC---------C-----Ccc----------------ccccceeEeeCCCC--cEE
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPD---------E-----SSI----------------TLRTPVKELLGHSN--VVI  296 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----~~~----------------~~~~~~~~~~~h~~--~v~  296 (360)
                      ||+.++.......... ........+.         .     ...                ....+...+..|..  .+.
T Consensus       101 wd~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (369)
T 3zwl_B          101 WDVSNGQCVATWKSPV-PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT  179 (369)
T ss_dssp             EETTTCCEEEEEECSS-CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred             EECCCCcEEEEeecCC-CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence            9999887665544211 1000000000         0     100                01124455556666  899


Q ss_pred             EEEEcCCCCEEEEEECCCcEEEEECCC-CeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        297 AADWLSDGEQVITASWDRVANLFDVET-GTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~-~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      +++|+|+++++++|+.||.|++||+++ +..+..+..|...|.+++|+|++.+++++. ++.|
T Consensus       180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  242 (369)
T 3zwl_B          180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNS  242 (369)
T ss_dssp             EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceE
Confidence            999999999999999999999999998 788999999999999999999999888776 4444

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.93  E-value=2.2e-25  Score=200.66  Aligned_cols=146  Identities=21%  Similarity=0.255  Sum_probs=122.0

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEee--CCCEEEEEeCCCcEEEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIW  249 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~~i~vw  249 (360)
                      ..+.+|.+.|++++|+|++++|+||+.|++|+|||+.++.  ++..+.+|.+.|++++|+|  ++++|++|+.|++|++|
T Consensus         7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW   86 (316)
T 3bg1_A            7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW   86 (316)
T ss_dssp             -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred             eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence            3457999999999999999999999999999999998874  5678999999999999985  48899999999999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCeE-
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGTI-  326 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~~~-  326 (360)
                      |+.++.                          ......+.+|...|.+++|+|+  |.+|++|+.||+|++||++++.. 
T Consensus        87 d~~~~~--------------------------~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~  140 (316)
T 3bg1_A           87 REENGT--------------------------WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW  140 (316)
T ss_dssp             CCSSSC--------------------------CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE
T ss_pred             ECCCCc--------------------------ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc
Confidence            987652                          1235567789999999999998  78999999999999999987632 


Q ss_pred             --EEEEecCCCceEEEEEcCC
Q psy11015        327 --LQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       327 --~~~l~~h~~~v~~~~~~~~  345 (360)
                        ...+.+|...|.+++|+|+
T Consensus       141 ~~~~~~~~h~~~v~~~~~~~~  161 (316)
T 3bg1_A          141 EVKKINNAHTIGCNAVSWAPA  161 (316)
T ss_dssp             EECCBTTSSSSCBCCCEECCC
T ss_pred             ceeeeeccccCCcceEEEccc
Confidence              3455679999999999997

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.93  E-value=2e-24  Score=201.22  Aligned_cols=198  Identities=14%  Similarity=0.093  Sum_probs=150.7

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      +.....+..|.  ...+.....+.+|.+.|++++|+|++.+|++|+.||+|++||+.+++++..+.+|.+.|.+++|+|+
T Consensus       115 ~~~dg~i~iwd--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~  192 (420)
T 3vl1_A          115 GTTEGDIKVLD--SNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDR  192 (420)
T ss_dssp             EETTSCEEEEC--TTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETT
T ss_pred             EECCCCEEEEe--CCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCC
Confidence            33344444454  3466778888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  313 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d  313 (360)
                      +++|++|+.|++|++||++++...................    .............|...+.+++|+|+|++|++|+.|
T Consensus       193 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  268 (420)
T 3vl1_A          193 GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSI----ALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS  268 (420)
T ss_dssp             TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEE----EEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT
T ss_pred             CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEE----EEecCCcceeeecccCcccceEEcCCCCEEEEEcCC
Confidence            9999999999999999999886555433221110000000    000000000112245667778889999999999999


Q ss_pred             CcEEEEECCCCeEEEEEe-cCCCceEEEEEcCCCC-EEEccc-ccch
Q psy11015        314 RVANLFDVETGTILQSLT-EPGEAIRAAAGRTGGP-IRASPL-LLAI  357 (360)
Q Consensus       314 g~i~iwd~~~~~~~~~l~-~h~~~v~~~~~~~~g~-~las~~-~~~i  357 (360)
                      |.|++||+++++.+..+. .|...|++++|+|++. +++++. ++.|
T Consensus       269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i  315 (420)
T 3vl1_A          269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGML  315 (420)
T ss_dssp             SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred             CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeE
Confidence            999999999998887775 4788999999999998 777766 4444

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.93  E-value=2.3e-23  Score=186.28  Aligned_cols=202  Identities=15%  Similarity=0.177  Sum_probs=145.2

Q ss_pred             CeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-----------------
Q psy11015        157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-----------------  219 (360)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-----------------  219 (360)
                      +..+.+|+...........+.+|...|++++|+|++++|++|+.||+|++||+.+++++..+.                 
T Consensus        44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~  123 (318)
T 4ggc_A           44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS  123 (318)
T ss_dssp             TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEE
T ss_pred             CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEE
Confidence            455666665543333333445788899999999999999999999999999999887765543                 


Q ss_pred             ------------------------CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee----eCCCCCCCCCCC
Q psy11015        220 ------------------------GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV----SNNDNDSDLDES  271 (360)
Q Consensus       220 ------------------------~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~----~~~~~~~~~~~~  271 (360)
                                              +|...+..+.|++++.++++++.|++|++||+.++.....    ............
T Consensus       124 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~  203 (318)
T 4ggc_A          124 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVA  203 (318)
T ss_dssp             EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEE
T ss_pred             EEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEE
Confidence                                    4566778888888999999999999999999987642211    111100000000


Q ss_pred             ------------CCCCCCcccc----ccceeEeeCCCCcEEEEEEcCCCCEEEEEE--CCCcEEEEECCCCeEEEEEecC
Q psy11015        272 ------------KEPDESSITL----RTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSLTEP  333 (360)
Q Consensus       272 ------------~~~~~~~~~~----~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--~dg~i~iwd~~~~~~~~~l~~h  333 (360)
                                  ..........    .........+...+..+.|+|++..+++++  .||.|++||+.+++++.++.+|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH  283 (318)
T 4ggc_A          204 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH  283 (318)
T ss_dssp             ECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC
T ss_pred             ecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCC
Confidence                        0001111111    112223345677899999999999988765  7999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        334 GEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .+.|++++|+|+|.+|||++ |+.||
T Consensus       284 ~~~V~~l~~spdg~~l~S~s~D~~v~  309 (318)
T 4ggc_A          284 TSRVLSLTMSPDGATVASAAADETLR  309 (318)
T ss_dssp             SSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred             CCCEEEEEEcCCCCEEEEEecCCeEE
Confidence            99999999999999888776 56665

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.92  E-value=6.4e-24  Score=191.40  Aligned_cols=166  Identities=19%  Similarity=0.193  Sum_probs=137.3

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCeEEEEEee--CCCEEEEEeCCCcEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVH  247 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~~i~  247 (360)
                      ..+.+|.+.|++++|+|++++|++|+.||+|++||+.++    +....+.+|.+.|.+++|+|  ++.+|++|+.|++|+
T Consensus         5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~   84 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK   84 (351)
T ss_dssp             CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred             ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence            456799999999999999999999999999999999876    57788899999999999999  699999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCe
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      +||+..+....                   ......++..+.+|...|.+++|+|+  +.++++|+.||.|++||+++++
T Consensus        85 vwd~~~~~~~~-------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~  145 (351)
T 3f3f_A           85 LWEEDPDQEEC-------------------SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS  145 (351)
T ss_dssp             EEEECTTSCTT-------------------SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred             EEecCCCcccc-------------------cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence            99998652110                   00112356777889999999999999  9999999999999999986543


Q ss_pred             ------------------------------------------------------------EEEEEecCCCceEEEEEcCC
Q psy11015        326 ------------------------------------------------------------ILQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       326 ------------------------------------------------------------~~~~l~~h~~~v~~~~~~~~  345 (360)
                                                                                  .+..+.+|...|++++|+|+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~  225 (351)
T 3f3f_A          146 DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPS  225 (351)
T ss_dssp             CTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCC
T ss_pred             HhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCC
Confidence                                                                        14456678889999999999


Q ss_pred             C----CEEEccc-ccchh
Q psy11015        346 G----PIRASPL-LLAIR  358 (360)
Q Consensus       346 g----~~las~~-~~~ir  358 (360)
                      +    .+++++. |+.||
T Consensus       226 ~~~~~~~l~s~~~dg~i~  243 (351)
T 3f3f_A          226 IGRWYQLIATGCKDGRIR  243 (351)
T ss_dssp             SSCSSEEEEEEETTSCEE
T ss_pred             CCCcceEEEEEcCCCeEE
Confidence            8    6777665 45443

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.92  E-value=3.4e-24  Score=196.22  Aligned_cols=163  Identities=17%  Similarity=0.193  Sum_probs=140.1

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEEEeCCCcCeEEEEEeeC--CCEEEEEeCCCc
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFLPN--KDLVLSASGDKS  245 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~--~~~~~~~~~~h~~~v~~i~~~p~--~~~l~s~s~d~~  245 (360)
                      |.++..+.+|.+.|++++|+|++++|++|+.||.|++||+.  ++..+..+.+|.+.|.+++|+|+  +++|++|+.|+.
T Consensus         1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~   80 (379)
T 3jrp_A            1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK   80 (379)
T ss_dssp             ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred             CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence            35677899999999999999999999999999999999998  56788889999999999999977  899999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVET  323 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~  323 (360)
                      |++||+.++..                          .....+.+|...|.+++|+|+  +.++++|+.||.|++||+.+
T Consensus        81 v~iwd~~~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~  134 (379)
T 3jrp_A           81 VLIWKEENGRW--------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE  134 (379)
T ss_dssp             EEEEEEETTEE--------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred             EEEEEcCCCce--------------------------eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence            99999987631                          145667789999999999999  99999999999999999988


Q ss_pred             Ce--EEEEEecCCCceEEEEEcC-------------CCCEEEccc-ccchh
Q psy11015        324 GT--ILQSLTEPGEAIRAAAGRT-------------GGPIRASPL-LLAIR  358 (360)
Q Consensus       324 ~~--~~~~l~~h~~~v~~~~~~~-------------~g~~las~~-~~~ir  358 (360)
                      +.  ....+..|...|++++|+|             ++.+++++. ++.||
T Consensus       135 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~  185 (379)
T 3jrp_A          135 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK  185 (379)
T ss_dssp             TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEE
T ss_pred             CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEE
Confidence            73  4456778999999999999             688777766 44443

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.92  E-value=8.1e-24  Score=193.47  Aligned_cols=195  Identities=15%  Similarity=0.067  Sum_probs=154.4

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe----EEEEEeCCCcCeEEEE
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----CVLQYSGHSGSVNSVR  229 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~----~~~~~~~h~~~v~~i~  229 (360)
                      +..+..+..|............+.+|...|.+++|+|++++|++|+.||.|++||+..+.    ......+|...|.+++
T Consensus        70 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~  149 (372)
T 1k8k_C           70 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD  149 (372)
T ss_dssp             EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE
T ss_pred             EcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEE
Confidence            334445555555444444555668899999999999999999999999999999998875    2333367899999999


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      |+|++++|++|+.|+.|++||+........          ..............++..+.+|...|.+++|+|++++|++
T Consensus       150 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  219 (372)
T 1k8k_C          150 WHPNSVLLAAGSCDFKCRIFSAYIKEVEER----------PAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW  219 (372)
T ss_dssp             ECTTSSEEEEEETTSCEEEEECCCTTTSCC----------CCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE
T ss_pred             EcCCCCEEEEEcCCCCEEEEEccccccccc----------ccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE
Confidence            999999999999999999999764311000          0000000011234566777789999999999999999999


Q ss_pred             EECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        310 ASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      |+.||.|++||+++++.+..+..|..+|++++|+|+|.+++++.++.|+
T Consensus       220 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~  268 (372)
T 1k8k_C          220 VSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPV  268 (372)
T ss_dssp             EETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCE
T ss_pred             EeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEE
Confidence            9999999999999999999999999999999999999999999887664

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.92  E-value=3.3e-23  Score=189.45  Aligned_cols=181  Identities=14%  Similarity=0.146  Sum_probs=151.6

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEE--EeCCCcCeEEEEE
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--YSGHSGSVNSVRF  230 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~--~~~h~~~v~~i~~  230 (360)
                      .+..+..+..|.........+..+.+|.+.|.+++|+|++.+|++|+.||.|++||+.+++....  +.+|...|.+++|
T Consensus        25 ~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~  104 (372)
T 1k8k_C           25 ICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW  104 (372)
T ss_dssp             EECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE
T ss_pred             EEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEE
Confidence            34455666677766555558899999999999999999999999999999999999998875444  4679999999999


Q ss_pred             eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE
Q psy11015        231 LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  310 (360)
Q Consensus       231 ~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg  310 (360)
                      +|++++|++|+.|+.|++||+..+....                        .......+|...|.+++|+|++++|++|
T Consensus       105 ~~~~~~l~~~~~d~~v~i~d~~~~~~~~------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~  160 (372)
T 1k8k_C          105 APNEKKFAVGSGSRVISICYFEQENDWW------------------------VCKHIKKPIRSTVLSLDWHPNSVLLAAG  160 (372)
T ss_dssp             CTTSSEEEEEETTSSEEEEEEETTTTEE------------------------EEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred             CCCCCEEEEEeCCCEEEEEEecCCCcce------------------------eeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence            9999999999999999999998662110                        0122335788999999999999999999


Q ss_pred             ECCCcEEEEEC------------------CCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        311 SWDRVANLFDV------------------ETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       311 s~dg~i~iwd~------------------~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      +.||.|++||+                  .+++.+..+..|...|++++|+|+|.+++++. ++.|
T Consensus       161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  226 (372)
T 1k8k_C          161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV  226 (372)
T ss_dssp             ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred             cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence            99999999995                  47889999999999999999999999888776 4444

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.92  E-value=7.6e-24  Score=192.62  Aligned_cols=178  Identities=8%  Similarity=-0.017  Sum_probs=138.3

Q ss_pred             eeeecCCeEEEeeecCc-------cceeeeeeee-cCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy11015        151 KLKVQTSKIVSSFKTSL-------LSCYKIRSFS-GHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYSG  220 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~-~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~  220 (360)
                      .+.+.....+..|....       .+...++.+. +|.+.|.+++|+|  +++++++|+.||+|++||+++++++..+..
T Consensus        88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~  167 (343)
T 3lrv_A           88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA  167 (343)
T ss_dssp             EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred             eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence            34455555666665432       2444455554 7889999999999  999999999999999999999998777744


Q ss_pred             -CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccce-eEeeC-CCCcEEE
Q psy11015        221 -HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPV-KELLG-HSNVVIA  297 (360)
Q Consensus       221 -h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-h~~~v~~  297 (360)
                       |...|.+++|+|+|.+|++|+.|++|++||++++.                            .. ..+.+ |.+.|++
T Consensus       168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~----------------------------~~~~~~~~~h~~~v~~  219 (343)
T 3lrv_A          168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD----------------------------QASSRFPVDEEAKIKE  219 (343)
T ss_dssp             CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT----------------------------SCCEECCCCTTSCEEE
T ss_pred             CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC----------------------------CCccEEeccCCCCEEE
Confidence             45589999999999999999999999999998762                            23 45666 9999999


Q ss_pred             EEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec---CCCce--EEEEEcCCCCEEEccc--ccch
Q psy11015        298 ADWLSDGEQVITASWDRVANLFDVETGTILQSLTE---PGEAI--RAAAGRTGGPIRASPL--LLAI  357 (360)
Q Consensus       298 i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~---h~~~v--~~~~~~~~g~~las~~--~~~i  357 (360)
                      ++|+|+|.+|++|+ |+.|++||+++++.+..+..   |...+  .+++|+|+|.++++++  ++.|
T Consensus       220 l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i  285 (343)
T 3lrv_A          220 VKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSL  285 (343)
T ss_dssp             EEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEE
T ss_pred             EEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcE
Confidence            99999999999999 55999999998876655443   33344  3699999999999844  5544

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.92  E-value=1.8e-23  Score=192.65  Aligned_cols=161  Identities=11%  Similarity=0.060  Sum_probs=139.8

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEee-CCCEEEEEeCC
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLP-NKDLVLSASGD  243 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p-~~~~l~s~s~d  243 (360)
                      ........+.+|.+.|++++|+|++ .+|++|+.||.|++||+.++.....+.  +|.+.|.+++|+| ++.+|++++.|
T Consensus        61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  140 (383)
T 3ei3_B           61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR  140 (383)
T ss_dssp             TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred             cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence            3456677889999999999999998 899999999999999999887777765  6999999999999 77999999999


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe---eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL---LGHSNVVIAADWLSDGEQVITASWDRVANLFD  320 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd  320 (360)
                      ++|++||+...                             ....+   .+|...|.+++|+|++++|++|+.||.|++||
T Consensus       141 ~~i~iwd~~~~-----------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d  191 (383)
T 3ei3_B          141 GATTLRDFSGS-----------------------------VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLG  191 (383)
T ss_dssp             TEEEEEETTSC-----------------------------EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred             CEEEEEECCCC-----------------------------ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence            99999999753                             22333   34558899999999999999999999999999


Q ss_pred             CCCCeEEEEEecCCCceEEEEEcCCCC-EEEccc-ccchh
Q psy11015        321 VETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAIR  358 (360)
Q Consensus       321 ~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~ir  358 (360)
                      + +++.+..+.+|...|++++|+|++. ++++++ |+.||
T Consensus       192 ~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~  230 (383)
T 3ei3_B          192 L-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVK  230 (383)
T ss_dssp             T-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred             C-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEE
Confidence            8 5888999999999999999999998 777665 44443

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.92  E-value=1.4e-24  Score=201.52  Aligned_cols=205  Identities=14%  Similarity=0.051  Sum_probs=137.7

Q ss_pred             eecCCeEEEeeecCccc---eeeeeeeecCCCCEEEEEECC--------CCCEEEEEeCCCcEEEEECCCCeEEEEEeCC
Q psy11015        153 KVQTSKIVSSFKTSLLS---CYKIRSFSGHRDGVWDVAVRP--------GQPVLGSASADRTVRLWSTQTGKCVLQYSGH  221 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~---~~~~~~l~~h~~~V~~l~~~~--------~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h  221 (360)
                      .+.....+..|......   ...+..+.||.+.|++++|+|        ++++|+|||.|++|+|||+.++.++..+.+|
T Consensus       106 s~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~  185 (393)
T 4gq1_A          106 CVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPL  185 (393)
T ss_dssp             EEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEEC
T ss_pred             EEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCC
Confidence            34455556666654433   234567889999999999997        7889999999999999999999888888889


Q ss_pred             CcCeEEEEEeeCC-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC----------------C----------CCC
Q psy11015        222 SGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE----------------S----------KEP  274 (360)
Q Consensus       222 ~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~----------------~----------~~~  274 (360)
                      .+.|.+++|+|++ .+|++|+.|++|++||+.++................                .          ..+
T Consensus       186 ~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~  265 (393)
T 4gq1_A          186 SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGS  265 (393)
T ss_dssp             SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETT
T ss_pred             CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecC
Confidence            9999999999987 489999999999999998875433221110000000                0          000


Q ss_pred             ---------CCCcc-----ccccceeEeeCCCCcEEEE------------------EEcC--CCCEEEEEECCCcEEEEE
Q psy11015        275 ---------DESSI-----TLRTPVKELLGHSNVVIAA------------------DWLS--DGEQVITASWDRVANLFD  320 (360)
Q Consensus       275 ---------~~~~~-----~~~~~~~~~~~h~~~v~~i------------------~~sp--~g~~l~tgs~dg~i~iwd  320 (360)
                               .+...     ........+..|...+..+                  .|+|  ++.++++|+.||+|++||
T Consensus       266 dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd  345 (393)
T 4gq1_A          266 DGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLIN  345 (393)
T ss_dssp             TTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEE
T ss_pred             CCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEE
Confidence                     00000     0011112222333333222                  2333  334667888999999999


Q ss_pred             CCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccch
Q psy11015        321 VETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       321 ~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      +.++..+..+..|..+|++++|+|+|++||+++++++
T Consensus       346 ~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv  382 (393)
T 4gq1_A          346 TYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV  382 (393)
T ss_dssp             TTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred             CCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence            9999988888889999999999999999999998775

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.92  E-value=5.9e-23  Score=183.07  Aligned_cols=171  Identities=22%  Similarity=0.388  Sum_probs=151.1

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeC-CCcCeEEEE
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVR  229 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~  229 (360)
                      +.+..+..+..|.    ....+..+.+|.+.|.+++|.| +++.+++++.||.|++||  .+.....+.. |...|.+++
T Consensus       118 ~~~~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~  191 (313)
T 3odt_A          118 ISGSWDKTAKVWK----EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLA  191 (313)
T ss_dssp             EEEETTSEEEEEE----TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEE
T ss_pred             EEEeCCCCEEEEc----CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEE
Confidence            3444455555665    5678888999999999999988 888999999999999999  5677788887 999999999


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      |+|++. +++++.|+.|++||+.++                            .++..+.+|...|.+++|+|++ .+++
T Consensus       192 ~~~~~~-~~~~~~dg~i~i~d~~~~----------------------------~~~~~~~~~~~~i~~~~~~~~~-~l~~  241 (313)
T 3odt_A          192 VVDDGH-FISCSNDGLIKLVDMHTG----------------------------DVLRTYEGHESFVYCIKLLPNG-DIVS  241 (313)
T ss_dssp             EEETTE-EEEEETTSEEEEEETTTC----------------------------CEEEEEECCSSCEEEEEECTTS-CEEE
T ss_pred             EcCCCe-EEEccCCCeEEEEECCch----------------------------hhhhhhhcCCceEEEEEEecCC-CEEE
Confidence            999998 999999999999999866                            3566778899999999999999 6999


Q ss_pred             EECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        310 ASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      |+.||.|++||+.+++.+..+..|...|++++|+|+|.+++++.++.||
T Consensus       242 ~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~  290 (313)
T 3odt_A          242 CGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVR  290 (313)
T ss_dssp             EETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEE
T ss_pred             EecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEE
Confidence            9999999999999999999999999999999999999999888887765

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.92  E-value=3.1e-23  Score=191.07  Aligned_cols=176  Identities=10%  Similarity=0.017  Sum_probs=147.7

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeCC---CcCeE
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGH---SGSVN  226 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h---~~~v~  226 (360)
                      .+.+..+..+..|............+.+|.+.|.+++|+| ++.+|++|+.|+.|++||+.. ..+..+..|   ...|.
T Consensus        89 l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~  167 (383)
T 3ei3_B           89 VAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYC  167 (383)
T ss_dssp             EEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEE
T ss_pred             EEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeE
Confidence            3345556667777777655555555668999999999999 678999999999999999985 555666544   47899


Q ss_pred             EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-
Q psy11015        227 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-  305 (360)
Q Consensus       227 ~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-  305 (360)
                      +++|+|++++|++|+.|+.|++||+..                             .++..+.+|...|.+++|+|+++ 
T Consensus       168 ~~~~~~~~~~l~~~~~d~~i~i~d~~~-----------------------------~~~~~~~~h~~~v~~~~~~~~~~~  218 (383)
T 3ei3_B          168 CVDVSVSRQMLATGDSTGRLLLLGLDG-----------------------------HEIFKEKLHKAKVTHAEFNPRCDW  218 (383)
T ss_dssp             EEEEETTTTEEEEEETTSEEEEEETTS-----------------------------CEEEEEECSSSCEEEEEECSSCTT
T ss_pred             EEEECCCCCEEEEECCCCCEEEEECCC-----------------------------CEEEEeccCCCcEEEEEECCCCCC
Confidence            999999999999999999999999842                             25677889999999999999999 


Q ss_pred             EEEEEECCCcEEEEECCC----CeEEEEEecCCCceEEEEEcC-CCCEEEccc-ccch
Q psy11015        306 QVITASWDRVANLFDVET----GTILQSLTEPGEAIRAAAGRT-GGPIRASPL-LLAI  357 (360)
Q Consensus       306 ~l~tgs~dg~i~iwd~~~----~~~~~~l~~h~~~v~~~~~~~-~g~~las~~-~~~i  357 (360)
                      ++++|+.||.|++||+++    +.++..+ +|...|++++|+| +|.+++++. ++.|
T Consensus       219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i  275 (383)
T 3ei3_B          219 LMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEI  275 (383)
T ss_dssp             EEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEE
T ss_pred             EEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcE
Confidence            999999999999999997    6777777 6999999999999 999888776 4444

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.92  E-value=2.6e-23  Score=206.73  Aligned_cols=162  Identities=30%  Similarity=0.349  Sum_probs=142.8

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE---eCCCcCeEEEEEeeCC--CEEEEEeC
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSVRFLPNK--DLVLSASG  242 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~---~~h~~~v~~i~~~p~~--~~l~s~s~  242 (360)
                      .++..++.+.+|.+.|++++|+|++..|+||+.|++|++||..........   .+|...|.+++|+|++  ..+++|+.
T Consensus       460 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~  539 (694)
T 3dm0_A          460 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW  539 (694)
T ss_dssp             TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred             CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC
Confidence            556788899999999999999999999999999999999998755433332   4688899999999986  58999999


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      |++|++||+.++                            .....+.+|.+.|++++|+|+|++|++|+.||+|++||++
T Consensus       540 d~~v~vwd~~~~----------------------------~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~  591 (694)
T 3dm0_A          540 DKTVKVWNLSNC----------------------------KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA  591 (694)
T ss_dssp             TSCEEEEETTTC----------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred             CCeEEEEECCCC----------------------------cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence            999999999765                            3456788999999999999999999999999999999999


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      +++.+..+.. ...|.+++|+|++.+++++.+..||
T Consensus       592 ~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~  626 (694)
T 3dm0_A          592 EGKKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIK  626 (694)
T ss_dssp             TTEEEECCBC-SSCEEEEEECSSSSEEEEEETTEEE
T ss_pred             CCceEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEE
Confidence            9999888864 4679999999999999999887664

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.92  E-value=9.6e-24  Score=192.25  Aligned_cols=204  Identities=18%  Similarity=0.196  Sum_probs=156.1

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEE---eCCCcCeEEE
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSV  228 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~---~~h~~~v~~i  228 (360)
                      .+..+..+..|..  .++..+..+.+|.+.|.+++|+| ++.+|++|+.||+|++||+.+++.+..+   .+|...|.++
T Consensus        90 ~~~~dg~i~v~d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~  167 (366)
T 3k26_A           90 VAGSRGIIRIINP--ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA  167 (366)
T ss_dssp             EEETTCEEEEECT--TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred             EecCCCEEEEEEc--hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence            3444445555543  45678889999999999999999 8999999999999999999999999998   6899999999


Q ss_pred             EEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCC----------------------------CCCCCC-------CCCCC
Q psy11015        229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNN----------------------------DNDSDL-------DESKE  273 (360)
Q Consensus       229 ~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~----------------------------~~~~~~-------~~~~~  273 (360)
                      +|+|++.+|++++.|+.|++||++++........                            +.....       .....
T Consensus       168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~  247 (366)
T 3k26_A          168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSK  247 (366)
T ss_dssp             EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEE
T ss_pred             EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEE
Confidence            9999999999999999999999986643211110                            000000       00000


Q ss_pred             CCCCccc-------------------cccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCe----EEE
Q psy11015        274 PDESSIT-------------------LRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT----ILQ  328 (360)
Q Consensus       274 ~~~~~~~-------------------~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~~----~~~  328 (360)
                      ..+....                   ....+..+.+|...|++++|+|+  |++|++|+.||.|++||+.+++    ...
T Consensus       248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  327 (366)
T 3k26_A          248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCT  327 (366)
T ss_dssp             CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEE
T ss_pred             ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccce
Confidence            0111110                   11236677889999999999999  9999999999999999999875    455


Q ss_pred             EEecC--CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        329 SLTEP--GEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       329 ~l~~h--~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .+..|  ...|++++|+|+|+++++++ |+.|+
T Consensus       328 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~  360 (366)
T 3k26_A          328 TLTHHKCGAAIRQTSFSRDSSILIAVCDDASIW  360 (366)
T ss_dssp             EECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             EEcccccCCceEEEEeCCCCCeEEEEeCCCEEE
Confidence            77777  78999999999999888776 44443

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.91  E-value=1.3e-23  Score=192.49  Aligned_cols=158  Identities=18%  Similarity=0.213  Sum_probs=124.5

Q ss_pred             eecCCCCEEEEEECCCCCEEEEEeC------CCcEEEEECCCCeE----EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLGSASA------DRTVRLWSTQTGKC----VLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~sgs~------Dg~v~iwd~~~~~~----~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      ..+|.+.|++++|+|||.+|++||.      |++|++|+..++..    .....+|...|.+++|+|++. +++++.||+
T Consensus        38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~  116 (357)
T 4g56_B           38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGA  116 (357)
T ss_dssp             --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSC
T ss_pred             cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCE
Confidence            3579999999999999999999998      77899999887643    233456889999999999975 567889999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      |+|||+.++....                        .......+|...|++++|+|+|++|++|+.||.|++||+.+++
T Consensus       117 v~lWd~~~~~~~~------------------------~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~  172 (357)
T 4g56_B          117 VELWEILEKESLL------------------------VNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA  172 (357)
T ss_dssp             EEEC--------C------------------------CCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE
T ss_pred             EEEeeccccceeE------------------------EEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Confidence            9999998763321                        1233456899999999999999999999999999999999999


Q ss_pred             EEEEEecCCCceEEEEEcCCCC-EE-Ecccccchh
Q psy11015        326 ILQSLTEPGEAIRAAAGRTGGP-IR-ASPLLLAIR  358 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~g~-~l-as~~~~~ir  358 (360)
                      ++..+.+|...|++++|+|++. ++ +++.|+.||
T Consensus       173 ~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~  207 (357)
T 4g56_B          173 VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL  207 (357)
T ss_dssp             EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEE
T ss_pred             EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceE
Confidence            9999999999999999999874 44 445566654

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.91  E-value=1.8e-23  Score=210.94  Aligned_cols=159  Identities=16%  Similarity=0.195  Sum_probs=146.0

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      ...+.+.+|.+.|.+++|+|++++|++|+.||.|+|||+.++..+..+.+|.+.|.+++|+|++++|++|+.||.|++||
T Consensus         4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~   83 (814)
T 3mkq_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN   83 (814)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred             ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQS  329 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~  329 (360)
                      +.++                            ..+..+.+|.+.|++++|+|++++|++|+.||.|++||+.++ .....
T Consensus        84 ~~~~----------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~  135 (814)
T 3mkq_A           84 YNTG----------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT  135 (814)
T ss_dssp             TTTC----------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE
T ss_pred             CCCC----------------------------cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE
Confidence            9876                            346677889999999999999999999999999999999987 77788


Q ss_pred             EecCCCceEEEEEcC-CCCEEEccc-ccch
Q psy11015        330 LTEPGEAIRAAAGRT-GGPIRASPL-LLAI  357 (360)
Q Consensus       330 l~~h~~~v~~~~~~~-~g~~las~~-~~~i  357 (360)
                      +.+|...|.+++|+| ++.+++++. ++.|
T Consensus       136 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v  165 (814)
T 3mkq_A          136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTV  165 (814)
T ss_dssp             EECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred             EcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence            899999999999999 887777766 4444

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.91  E-value=2.4e-22  Score=180.84  Aligned_cols=172  Identities=12%  Similarity=0.155  Sum_probs=149.1

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      .+.....+..|............+.+|...|.+++|+|+++.+++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|
T Consensus       114 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~  193 (337)
T 1gxr_A          114 VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN  193 (337)
T ss_dssp             EEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred             EEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC
Confidence            34445566667666655567888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015        233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  312 (360)
Q Consensus       233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~  312 (360)
                      +++++++++.|+.|++||+.++..                            +..+ .|...+.+++|+|+++++++++.
T Consensus       194 ~~~~l~~~~~dg~i~~~d~~~~~~----------------------------~~~~-~~~~~v~~~~~s~~~~~l~~~~~  244 (337)
T 1gxr_A          194 DGTKLWTGGLDNTVRSWDLREGRQ----------------------------LQQH-DFTSQIFSLGYCPTGEWLAVGME  244 (337)
T ss_dssp             TSSEEEEEETTSEEEEEETTTTEE----------------------------EEEE-ECSSCEEEEEECTTSSEEEEEET
T ss_pred             CCCEEEEEecCCcEEEEECCCCce----------------------------Eeee-cCCCceEEEEECCCCCEEEEEcC
Confidence            999999999999999999987632                            2222 46788999999999999999999


Q ss_pred             CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        313 DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       313 dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ||.|++||+.+++. ..+..|...|++++|+|+|.+++++..
T Consensus       245 ~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~  285 (337)
T 1gxr_A          245 SSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGK  285 (337)
T ss_dssp             TSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             CCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecC
Confidence            99999999998875 467789999999999999998887763

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.91  E-value=1.2e-22  Score=188.67  Aligned_cols=175  Identities=19%  Similarity=0.199  Sum_probs=149.2

Q ss_pred             eecCCeEEEeeecCccceeeeeeeec-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~  231 (360)
                      .+..+..+..|...  ++.....+.. |.+.|.+++|+|++.+|++|+.||.|++||+.+++.+..+.+|.+.|.+++| 
T Consensus       108 ~~~~d~~v~lw~~~--~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-  184 (401)
T 4aez_A          108 AVALERNVYVWNAD--SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW-  184 (401)
T ss_dssp             EEEETTEEEEEETT--TCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-
T ss_pred             EEECCCeEEEeeCC--CCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE-
Confidence            34444455555544  4555555555 8999999999999999999999999999999999999999999999999999 


Q ss_pred             eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                       ++.++++|+.|+.|++||++...                           .....+.+|.+.|.+++|+|++.+|++|+
T Consensus       185 -~~~~l~~~~~dg~i~i~d~~~~~---------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  236 (401)
T 4aez_A          185 -NRHVLSSGSRSGAIHHHDVRIAN---------------------------HQIGTLQGHSSEVCGLAWRSDGLQLASGG  236 (401)
T ss_dssp             -ETTEEEEEETTSEEEEEETTSSS---------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             -CCCEEEEEcCCCCEEEEecccCc---------------------------ceeeEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence             46799999999999999997431                           34667889999999999999999999999


Q ss_pred             CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCC-CEEEccc---ccchh
Q psy11015        312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG-PIRASPL---LLAIR  358 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g-~~las~~---~~~ir  358 (360)
                      .||.|++||++++..+..+..|...|.+++|+|++ .+++++.   ++.|+
T Consensus       237 ~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~  287 (401)
T 4aez_A          237 NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH  287 (401)
T ss_dssp             TTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred             CCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence            99999999999999999999999999999999966 5777654   55543

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=4.4e-23  Score=206.85  Aligned_cols=181  Identities=23%  Similarity=0.294  Sum_probs=158.4

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeE
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVN  226 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~  226 (360)
                      .+.+..++.+.+|.....++..+..+.+|.+.|++++|+|+  +++|++|+.||+|++||+.+++  .+..+.+|.+.|.
T Consensus        24 latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~  103 (753)
T 3jro_A           24 LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN  103 (753)
T ss_dssp             EEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred             EEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE
Confidence            34556667778888777788999999999999999999988  8999999999999999999986  7888899999999


Q ss_pred             EEEEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC--
Q psy11015        227 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--  302 (360)
Q Consensus       227 ~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp--  302 (360)
                      +++|+|+  +.++++|+.||+|++||+..+..                          .....+.+|...|.+++|+|  
T Consensus       104 ~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~--------------------------~~~~~~~~~~~~v~~l~~~p~~  157 (753)
T 3jro_A          104 SVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--------------------------TSPIIIDAHAIGVNSASWAPAT  157 (753)
T ss_dssp             EEEECCGGGCSEEEEEETTSEEEEEECCSSSC--------------------------CCCEEEECCSSCEEEEEECCCC
T ss_pred             EEEECCCCCCCEEEEEeCCCcEEEEEeecCCC--------------------------cceeEeecCCCceEEEEecCcc
Confidence            9999999  99999999999999999986521                          13455678999999999999  


Q ss_pred             -----------CCCEEEEEECCCcEEEEECCCC----eEEEEEecCCCceEEEEEcCC---CCEEEccc-ccch
Q psy11015        303 -----------DGEQVITASWDRVANLFDVETG----TILQSLTEPGEAIRAAAGRTG---GPIRASPL-LLAI  357 (360)
Q Consensus       303 -----------~g~~l~tgs~dg~i~iwd~~~~----~~~~~l~~h~~~v~~~~~~~~---g~~las~~-~~~i  357 (360)
                                 ++.++++|+.||.|++||++++    .....+.+|..+|++++|+|+   |.++++++ |+.|
T Consensus       158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I  231 (753)
T 3jro_A          158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC  231 (753)
T ss_dssp             ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred             cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence                       5899999999999999999877    667788899999999999999   88888776 4444

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.91  E-value=1.2e-22  Score=191.85  Aligned_cols=203  Identities=21%  Similarity=0.360  Sum_probs=157.3

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~  230 (360)
                      .+.+..+..+..|..  .++..+..+.+|.+.|++++|+|++ .|++|+.||+|++||+.+++++..+.+|.+.|.+++|
T Consensus       135 l~sgs~dg~i~vwd~--~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~  211 (464)
T 3v7d_B          135 VITGADDKMIRVYDS--INKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI  211 (464)
T ss_dssp             EEEEETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred             EEEEcCCCcEEEEEC--CCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEE
Confidence            334455555555554  5667889999999999999999988 9999999999999999999999999999999999999


Q ss_pred             ee--CCCEEEEEeCCCcEEEEEcccCeeEeeeC-----------------------CCCCCCCC-------CCCCCCCC-
Q psy11015        231 LP--NKDLVLSASGDKSVHIWQAVINWECLVSN-----------------------NDNDSDLD-------ESKEPDES-  277 (360)
Q Consensus       231 ~p--~~~~l~s~s~d~~i~vwd~~~~~~~~~~~-----------------------~~~~~~~~-------~~~~~~~~-  277 (360)
                      ++  ++.++++|+.|++|++||+.++.......                       .+......       ......+. 
T Consensus       212 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~  291 (464)
T 3v7d_B          212 VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNT  291 (464)
T ss_dssp             EESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSC
T ss_pred             ecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCe
Confidence            95  67899999999999999998765332110                       00000000       00000111 


Q ss_pred             ----ccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEc-c
Q psy11015        278 ----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS-P  352 (360)
Q Consensus       278 ----~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las-~  352 (360)
                          ......++..+.+|...|.+++|+|+++++++|+.||.|++||+.+++++..+.+|...|.+++|+  +.++++ +
T Consensus       292 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s  369 (464)
T 3v7d_B          292 LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAA  369 (464)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEE
T ss_pred             EEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEe
Confidence                122345677888999999999999999999999999999999999999999999999999999998  355555 4


Q ss_pred             cccchh
Q psy11015        353 LLLAIR  358 (360)
Q Consensus       353 ~~~~ir  358 (360)
                      .|+.||
T Consensus       370 ~dg~v~  375 (464)
T 3v7d_B          370 ADGSIR  375 (464)
T ss_dssp             TTSEEE
T ss_pred             CCCcEE
Confidence            466554

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.91  E-value=6e-23  Score=192.63  Aligned_cols=180  Identities=22%  Similarity=0.258  Sum_probs=148.3

Q ss_pred             ecCCeEEEeeecCc--------cceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCe-------EEEE
Q psy11015        154 VQTSKIVSSFKTSL--------LSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGK-------CVLQ  217 (360)
Q Consensus       154 ~~~~~~~~~~~~~~--------~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~-------~~~~  217 (360)
                      +.....+.+|....        ..+..+..+.+|.+.|++++|+|++. +|++|+.||+|++|++..+.       ....
T Consensus       147 ~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~  226 (430)
T 2xyi_A          147 KTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNI  226 (430)
T ss_dssp             ECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEE
T ss_pred             ECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceecccee
Confidence            33344455565543        23678889999999999999999988 99999999999999998742       2567


Q ss_pred             EeCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEE
Q psy11015        218 YSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI  296 (360)
Q Consensus       218 ~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~  296 (360)
                      +.+|.+.|.+++|+| ++.+|++++.|+.|++||++++.                         ...++..+..|...|+
T Consensus       227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~-------------------------~~~~~~~~~~~~~~v~  281 (430)
T 2xyi_A          227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN-------------------------TSKPSHTVDAHTAEVN  281 (430)
T ss_dssp             ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC-------------------------SSSCSEEEECCSSCEE
T ss_pred             ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC-------------------------CCcceeEeecCCCCeE
Confidence            788999999999999 67899999999999999998652                         1134666778999999


Q ss_pred             EEEEcCCCC-EEEEEECCCcEEEEECCC-CeEEEEEecCCCceEEEEEcCCCC-EEEccc-ccchh
Q psy11015        297 AADWLSDGE-QVITASWDRVANLFDVET-GTILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAIR  358 (360)
Q Consensus       297 ~i~~sp~g~-~l~tgs~dg~i~iwd~~~-~~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~ir  358 (360)
                      +++|+|++. .+++|+.||.|++||+++ +..+..+..|...|++++|+|++. +++++. ++.|+
T Consensus       282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~  347 (430)
T 2xyi_A          282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH  347 (430)
T ss_dssp             EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred             EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence            999999987 689999999999999997 567889999999999999999985 565554 55543

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.91  E-value=5.2e-23  Score=190.06  Aligned_cols=153  Identities=19%  Similarity=0.243  Sum_probs=137.8

Q ss_pred             ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC---C---CcCeEEEEEeeCCCEEEEEeCC---CcEE
Q psy11015        177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG---H---SGSVNSVRFLPNKDLVLSASGD---KSVH  247 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~---h---~~~v~~i~~~p~~~~l~s~s~d---~~i~  247 (360)
                      ..|...|.+++|+|++ .|++|+.||.|++||+++++++..+.+   |   ...|.+++|+|++.+|++++.|   +.|+
T Consensus       183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~  261 (397)
T 1sq9_A          183 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT  261 (397)
T ss_dssp             SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred             cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence            4489999999999999 999999999999999999999999999   9   9999999999999999999999   9999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-------------CCCcEEEEEEcCCCCEEEEEECCC
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-------------HSNVVIAADWLSDGEQVITASWDR  314 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~i~~sp~g~~l~tgs~dg  314 (360)
                      +||+.++.                            ++..+.+             |...|.+++|+|++++|++|+.||
T Consensus       262 i~d~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  313 (397)
T 1sq9_A          262 LYETEFGE----------------------------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG  313 (397)
T ss_dssp             EEETTTCC----------------------------EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred             EEECCCCc----------------------------ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence            99998763                            3444555             899999999999999999999999


Q ss_pred             cEEEEECCCCeEEEEEe------cC---------------CCceEEEEEcCCC----------CEEEccc-ccchh
Q psy11015        315 VANLFDVETGTILQSLT------EP---------------GEAIRAAAGRTGG----------PIRASPL-LLAIR  358 (360)
Q Consensus       315 ~i~iwd~~~~~~~~~l~------~h---------------~~~v~~~~~~~~g----------~~las~~-~~~ir  358 (360)
                      .|++||+.+++.+..+.      +|               ..+|++++|+|+|          .+++++. |+.|+
T Consensus       314 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~  389 (397)
T 1sq9_A          314 KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR  389 (397)
T ss_dssp             EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred             eEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEE
Confidence            99999999999999999      88               9999999999998          6777665 55553

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.91  E-value=1.7e-22  Score=188.82  Aligned_cols=199  Identities=14%  Similarity=0.137  Sum_probs=145.9

Q ss_pred             CeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCE
Q psy11015        157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL  236 (360)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~  236 (360)
                      +..+.+|.........+..+.+|.+.|++|+|+|+|.+|++|+.||+|++||+.+++++..+.+|...+.+++|  ++.+
T Consensus       124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~  201 (420)
T 4gga_A          124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYI  201 (420)
T ss_dssp             TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTE
T ss_pred             CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCE
Confidence            44555666554444444455678899999999999999999999999999999999999999999999999887  4679


Q ss_pred             EEEEeCCCcEEEEEcccCeeEeee-CCCCC------------------------------CCCC---C--C---------
Q psy11015        237 VLSASGDKSVHIWQAVINWECLVS-NNDND------------------------------SDLD---E--S---------  271 (360)
Q Consensus       237 l~s~s~d~~i~vwd~~~~~~~~~~-~~~~~------------------------------~~~~---~--~---------  271 (360)
                      +++|+.|+.+++||.......... ..+..                              ....   .  .         
T Consensus       202 l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~  281 (420)
T 4gga_A          202 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKA  281 (420)
T ss_dssp             EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEE
T ss_pred             EEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceee
Confidence            999999999999998764322211 10000                              0000   0  0         


Q ss_pred             --CCC------------CCCc-----cccccceeEeeCCCCcEEEEEEcCCCCEEEEEE--CCCcEEEEECCCCeEEEEE
Q psy11015        272 --KEP------------DESS-----ITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSL  330 (360)
Q Consensus       272 --~~~------------~~~~-----~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--~dg~i~iwd~~~~~~~~~l  330 (360)
                        ..+            .+..     .....+...+. +...+.++.|+|+++.+++++  .||.|+|||+.+++++.++
T Consensus       282 ~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l  360 (420)
T 4gga_A          282 VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL  360 (420)
T ss_dssp             EEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE
T ss_pred             eeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE
Confidence              000            0000     01112233333 335688899999999988765  6899999999999999999


Q ss_pred             ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        331 TEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .+|.+.|++++|+|+|.+|+|++ |+.||
T Consensus       361 ~gH~~~V~~l~~spdg~~l~S~s~D~tvr  389 (420)
T 4gga_A          361 KGHTSRVLSLTMSPDGATVASAAADETLR  389 (420)
T ss_dssp             CCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred             cCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence            99999999999999999888776 66665

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.91  E-value=5.8e-24  Score=199.44  Aligned_cols=190  Identities=16%  Similarity=0.189  Sum_probs=144.2

Q ss_pred             cceeeeeee-ecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCC---Ce---EEEEEeCCCcCeEEEEEeeCCCEEEE
Q psy11015        168 LSCYKIRSF-SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT---GK---CVLQYSGHSGSVNSVRFLPNKDLVLS  239 (360)
Q Consensus       168 ~~~~~~~~l-~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~---~~---~~~~~~~h~~~v~~i~~~p~~~~l~s  239 (360)
                      ..+.++.++ .+|.+.|++++|+| ++.+|++|+.||+|++||+.+   +.   +...+. |.+.|.+++|+|++.+|++
T Consensus        50 ~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s  128 (437)
T 3gre_A           50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD-CSSTVTQITMIPNFDAFAV  128 (437)
T ss_dssp             CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred             ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc-CCCCEEEEEEeCCCCEEEE
Confidence            456788888 89999999999999 999999999999999999876   32   344444 9999999999999999999


Q ss_pred             EeCCCcEEEEEcc---cCeeEee--------eCCCC----C----------C-CCCCCCCCCCC-----ccccccceeEe
Q psy11015        240 ASGDKSVHIWQAV---INWECLV--------SNNDN----D----------S-DLDESKEPDES-----SITLRTPVKEL  288 (360)
Q Consensus       240 ~s~d~~i~vwd~~---~~~~~~~--------~~~~~----~----------~-~~~~~~~~~~~-----~~~~~~~~~~~  288 (360)
                      |+.|++|++||+.   .+.....        .....    .          . .........+.     ......++..+
T Consensus       129 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~  208 (437)
T 3gre_A          129 SSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII  208 (437)
T ss_dssp             EETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             EeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence            9999999999995   3322111        00000    0          0 00000001111     22334567777


Q ss_pred             eC--CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe-cCCCceEEEEEc----CCCCEEEccc-ccchh
Q psy11015        289 LG--HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGR----TGGPIRASPL-LLAIR  358 (360)
Q Consensus       289 ~~--h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~-~h~~~v~~~~~~----~~g~~las~~-~~~ir  358 (360)
                      .+  |...|++++|+|++++|++|+.||.|++||+++++++..+. .|..+|++++|+    |++.+++++. |+.||
T Consensus       209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~  286 (437)
T 3gre_A          209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLT  286 (437)
T ss_dssp             ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEE
T ss_pred             ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEE
Confidence            77  88999999999999999999999999999999999999986 788899999665    5677888776 44443

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.91  E-value=4.6e-23  Score=191.43  Aligned_cols=177  Identities=21%  Similarity=0.206  Sum_probs=146.8

Q ss_pred             ecCCeEEEeeecCccce-----eeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEE--eCCCcCe
Q psy11015        154 VQTSKIVSSFKTSLLSC-----YKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQY--SGHSGSV  225 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~-----~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~--~~h~~~v  225 (360)
                      +..+..+.+|.......     ..+..+.+|.+.|++++|+|++ .+|++|+.||+|++||+.+++++..+  .+|.+.|
T Consensus       100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v  179 (402)
T 2aq5_A          100 GSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI  179 (402)
T ss_dssp             EETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE
T ss_pred             EeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce
Confidence            44455556666554322     5688899999999999999998 69999999999999999999999999  8899999


Q ss_pred             EEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCc-EEEEEEcCC
Q psy11015        226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNV-VIAADWLSD  303 (360)
Q Consensus       226 ~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~i~~sp~  303 (360)
                      .+++|+|++.+|++++.|+.|++||++++.                            .+..+ .+|.+. +.+++|+|+
T Consensus       180 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~  231 (402)
T 2aq5_A          180 YSVDWSRDGALICTSCRDKRVRVIEPRKGT----------------------------VVAEKDRPHEGTRPVHAVFVSE  231 (402)
T ss_dssp             EEEEECTTSSCEEEEETTSEEEEEETTTTE----------------------------EEEEEECSSCSSSCCEEEECST
T ss_pred             EEEEECCCCCEEEEEecCCcEEEEeCCCCc----------------------------eeeeeccCCCCCcceEEEEcCC
Confidence            999999999999999999999999998763                            34455 577765 899999999


Q ss_pred             CCEEEEE---ECCCcEEEEECCCCeE-EEEEe-cCCCceEEEEEcCCCCEEE-cc-cccchh
Q psy11015        304 GEQVITA---SWDRVANLFDVETGTI-LQSLT-EPGEAIRAAAGRTGGPIRA-SP-LLLAIR  358 (360)
Q Consensus       304 g~~l~tg---s~dg~i~iwd~~~~~~-~~~l~-~h~~~v~~~~~~~~g~~la-s~-~~~~ir  358 (360)
                      +.++++|   +.||.|++||++++.. +.... .|...+.+++|+|+|.+++ ++ .|+.||
T Consensus       232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~  293 (402)
T 2aq5_A          232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIR  293 (402)
T ss_dssp             TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEE
T ss_pred             CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEE
Confidence            9999999   7899999999998654 33333 4677899999999999885 44 366554

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.91  E-value=1.2e-23  Score=201.73  Aligned_cols=177  Identities=14%  Similarity=0.076  Sum_probs=139.8

Q ss_pred             ecCCeEEEeeecCccce--eeeeeeecCCCCEEEEEECCC------CCEEEEEeCCCcEEEEECCCCeE-----------
Q psy11015        154 VQTSKIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPG------QPVLGSASADRTVRLWSTQTGKC-----------  214 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~------~~~l~sgs~Dg~v~iwd~~~~~~-----------  214 (360)
                      +.....+.+|.......  ....++.+|.+.|++++|+|+      +.+|++|+.||+|++||+..+.+           
T Consensus       179 ~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p  258 (524)
T 2j04_B          179 EKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP  258 (524)
T ss_dssp             ---CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred             CCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence            34445566676544332  224567889999999999996      56999999999999999986632           


Q ss_pred             EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCc
Q psy11015        215 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV  294 (360)
Q Consensus       215 ~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~  294 (360)
                      ...+.+|.+.|++++|+|++ .|++|+.||+|++||+.++.                           .+...+.+|...
T Consensus       259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~---------------------------~~~~~~~~H~~~  310 (524)
T 2j04_B          259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE---------------------------VPSFYDQVHDSY  310 (524)
T ss_dssp             SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS---------------------------SCSEEEECSSSC
T ss_pred             eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC---------------------------CceEEeeccccc
Confidence            34788999999999999864 89999999999999997541                           235567899999


Q ss_pred             EEEE--EEcCCC-CEEEEEECCCcEEEEECCCCeEEEEEecCCC--ceEEEEEcCCCCEEEccc-ccchh
Q psy11015        295 VIAA--DWLSDG-EQVITASWDRVANLFDVETGTILQSLTEPGE--AIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       295 v~~i--~~sp~g-~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~--~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |.++  +|+|+| .+|+|||.||+|+|||+++++++..+.+|..  .|.+++|+|++..++++. +..||
T Consensus       311 V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~  380 (524)
T 2j04_B          311 ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLR  380 (524)
T ss_dssp             EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEE
T ss_pred             EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEE
Confidence            9999  578888 8999999999999999999888777776653  588999999998777654 54454

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.91  E-value=5.9e-23  Score=216.44  Aligned_cols=159  Identities=19%  Similarity=0.254  Sum_probs=146.5

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      .....+.+|.+.|++++|+|++.+|++|+.||+|++||+.+++++..+.+|.+.|.+++|+|+++++++|+.|++|++||
T Consensus       606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd  685 (1249)
T 3sfz_A          606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD  685 (1249)
T ss_dssp             CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence            34456789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC--CCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--DGEQVITASWDRVANLFDVETGTILQ  328 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp--~g~~l~tgs~dg~i~iwd~~~~~~~~  328 (360)
                      +.++                            ..+..+.+|...|.+++|+|  ++.++++|+.||.|++||+.++.++.
T Consensus       686 ~~~~----------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~  737 (1249)
T 3sfz_A          686 SATG----------------------------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN  737 (1249)
T ss_dssp             TTTC----------------------------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE
T ss_pred             CCCC----------------------------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh
Confidence            9876                            35677889999999999999  55689999999999999999999999


Q ss_pred             EEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        329 SLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      .+.+|.+.|++++|+|+|.++++++ |+.|
T Consensus       738 ~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v  767 (1249)
T 3sfz_A          738 TMFGHTNSVNHCRFSPDDELLASCSADGTL  767 (1249)
T ss_dssp             EECCCSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred             eecCCCCCEEEEEEecCCCEEEEEECCCeE
Confidence            9999999999999999999888876 4444

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.91  E-value=3.6e-23  Score=188.39  Aligned_cols=135  Identities=23%  Similarity=0.356  Sum_probs=117.7

Q ss_pred             ecCccceeeeeeeecCCCCEEEEEECCC---CCEEEEEeCCCcEEEEECCC-CeEE-EEEeCCCcCeEEEEEeeCCCEEE
Q psy11015        164 KTSLLSCYKIRSFSGHRDGVWDVAVRPG---QPVLGSASADRTVRLWSTQT-GKCV-LQYSGHSGSVNSVRFLPNKDLVL  238 (360)
Q Consensus       164 ~~~~~~~~~~~~l~~h~~~V~~l~~~~~---~~~l~sgs~Dg~v~iwd~~~-~~~~-~~~~~h~~~v~~i~~~p~~~~l~  238 (360)
                      .+.......+..+.+|.+.|++++|+|+   +++|++|+.||.|++||+.+ +..+ ..+.+|.+.|.+++|+|++++|+
T Consensus        23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  102 (368)
T 3mmy_A           23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF  102 (368)
T ss_dssp             CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred             cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence            3344566778889999999999999999   58999999999999999997 5544 78889999999999999999999


Q ss_pred             EEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE--cCCCCEEEEEECCCcE
Q psy11015        239 SASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW--LSDGEQVITASWDRVA  316 (360)
Q Consensus       239 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--sp~g~~l~tgs~dg~i  316 (360)
                      +|+.|+.|++||+.++.                             ...+.+|...|.+++|  +|++.+|++|+.||.|
T Consensus       103 s~~~dg~v~iwd~~~~~-----------------------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i  153 (368)
T 3mmy_A          103 TASCDKTAKMWDLSSNQ-----------------------------AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTL  153 (368)
T ss_dssp             EEETTSEEEEEETTTTE-----------------------------EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred             EEcCCCcEEEEEcCCCC-----------------------------ceeeccccCceEEEEEEeCCCCCEEEEccCCCcE
Confidence            99999999999998762                             2335579999999999  8999999999999999


Q ss_pred             EEEECCCCeEE
Q psy11015        317 NLFDVETGTIL  327 (360)
Q Consensus       317 ~iwd~~~~~~~  327 (360)
                      ++||+++++.+
T Consensus       154 ~vwd~~~~~~~  164 (368)
T 3mmy_A          154 KFWDTRSSNPM  164 (368)
T ss_dssp             EEECSSCSSCS
T ss_pred             EEEECCCCcEE
Confidence            99999876543

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.91  E-value=7.3e-24  Score=199.14  Aligned_cols=163  Identities=14%  Similarity=0.111  Sum_probs=132.3

Q ss_pred             ceeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEee-CCCEEEEEeCCC
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLP-NKDLVLSASGDK  244 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p-~~~~l~s~s~d~  244 (360)
                      .........+|...|+||+|+|. +.+||+|+.||+|+|||+.++.  ....+.+|.+.|++|+|+| ++.+|++|+.|+
T Consensus       108 ~~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~  187 (435)
T 4e54_B          108 SYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG  187 (435)
T ss_dssp             TTTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred             ceeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence            33455667889999999999994 5699999999999999998775  4455678999999999998 688999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      +|++||+.++...                          .......+...+.+++|+|++.+|++|+.||.|++||++ +
T Consensus       188 ~v~iwd~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~  240 (435)
T 4e54_B          188 TTRLQDFKGNILR--------------------------VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-G  240 (435)
T ss_dssp             CEEEEETTSCEEE--------------------------EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-S
T ss_pred             EEEEeeccCCcee--------------------------EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-c
Confidence            9999999765211                          111122344567899999999999999999999999986 5


Q ss_pred             eEEEEEecCCCceEEEEEcCCCC-EEEccc-ccchh
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAIR  358 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~ir  358 (360)
                      +.+..+.+|...|++++|+|++. ++++++ |+.||
T Consensus       241 ~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~  276 (435)
T 4e54_B          241 KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK  276 (435)
T ss_dssp             CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred             ceeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence            56778889999999999999886 676654 66554

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.91  E-value=4.8e-23  Score=193.33  Aligned_cols=185  Identities=16%  Similarity=0.236  Sum_probs=146.3

Q ss_pred             eecCCeEEEeeecCcc---------ceeeeeeeecCC------------CCEEEEEECCCC--CEEEEEeCCCcEEEEEC
Q psy11015        153 KVQTSKIVSSFKTSLL---------SCYKIRSFSGHR------------DGVWDVAVRPGQ--PVLGSASADRTVRLWST  209 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~---------~~~~~~~l~~h~------------~~V~~l~~~~~~--~~l~sgs~Dg~v~iwd~  209 (360)
                      .+.....+.+|.....         ...+...+.+|.            +.|++++|+|++  ..|++|+.||+|++||+
T Consensus        45 ~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~  124 (447)
T 3dw8_B           45 TGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKI  124 (447)
T ss_dssp             EEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEE
T ss_pred             EEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEec
Confidence            4555566666765532         234688899998            889999999998  79999999999999998


Q ss_pred             CCCeEE---------------------------------------EE-EeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        210 QTGKCV---------------------------------------LQ-YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       210 ~~~~~~---------------------------------------~~-~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      .++...                                       .. ..+|...|.+++|+|++++|++| .|++|++|
T Consensus       125 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iw  203 (447)
T 3dw8_B          125 SERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLW  203 (447)
T ss_dssp             EEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEE
T ss_pred             ccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEE
Confidence            764432                                       13 36899999999999999999998 79999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeE--
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTI--  326 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~--  326 (360)
                      |+.++.......                    ......+.+|...|.+++|+|++ .+|++|+.||.|++||++++..  
T Consensus       204 d~~~~~~~~~~~--------------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  263 (447)
T 3dw8_B          204 HLEITDRSFNIV--------------------DIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD  263 (447)
T ss_dssp             ETTEEEEEEEEE--------------------ECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred             ECCCCCceeeee--------------------ecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence            998543222100                    00011356899999999999998 9999999999999999999887  


Q ss_pred             --EEEEecCCC------------ceEEEEEcCCCCEEEcccccchh
Q psy11015        327 --LQSLTEPGE------------AIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       327 --~~~l~~h~~------------~v~~~~~~~~g~~las~~~~~ir  358 (360)
                        +..+..|..            .|++++|+|+|.+++++.++.||
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~  309 (447)
T 3dw8_B          264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVK  309 (447)
T ss_dssp             TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEE
T ss_pred             ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEE
Confidence              788888876            89999999999999998875443

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.91  E-value=3.8e-22  Score=179.58  Aligned_cols=159  Identities=15%  Similarity=0.206  Sum_probs=142.7

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      .++..+..+.+|.+.|.+++|+|+++.|++++.||.|++||+.+++.+..+. |...+.+++|+|+++++++++.|+.|+
T Consensus       171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~  249 (337)
T 1gxr_A          171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVE  249 (337)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEE
Confidence            4567888999999999999999999999999999999999999999888876 788999999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +||+.++                             ....+..|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus       250 ~~~~~~~-----------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~  300 (337)
T 1gxr_A          250 VLHVNKP-----------------------------DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI  300 (337)
T ss_dssp             EEETTSS-----------------------------CEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             EEECCCC-----------------------------CeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence            9999865                             23456789999999999999999999999999999999999887


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      ... .|...|++++|+|++++++++. ++.|
T Consensus       301 ~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i  330 (337)
T 1gxr_A          301 FQS-KESSSVLSCDISVDDKYIVTGSGDKKA  330 (337)
T ss_dssp             EEE-ECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred             EEe-cCCCcEEEEEECCCCCEEEEecCCCeE
Confidence            554 4788999999999999888766 4444

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.91  E-value=7.5e-23  Score=189.99  Aligned_cols=161  Identities=22%  Similarity=0.257  Sum_probs=146.0

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ..+..+..+.+|.+.|.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|.+++|+|++ ++++++.|+.|+
T Consensus       235 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~  313 (425)
T 1r5m_A          235 TEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVR  313 (425)
T ss_dssp             TCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEE
T ss_pred             CCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEE
Confidence            3456777888999999999999999999999999999999999999999999999999999999999 999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe--
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT--  325 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~--  325 (360)
                      +||+.++                            ..+..+..|...|.+++|+|++++|++|+.||.|++||+.++.  
T Consensus       314 i~d~~~~----------------------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~  365 (425)
T 1r5m_A          314 LWSLKQN----------------------------TLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSK  365 (425)
T ss_dssp             EEETTTT----------------------------EEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC-
T ss_pred             EEECCCC----------------------------cEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccc
Confidence            9999876                            3456677899999999999999999999999999999999888  


Q ss_pred             ------------------EEEEEecCCC--ceEEEEEcCCCCEEEccc-ccch
Q psy11015        326 ------------------ILQSLTEPGE--AIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       326 ------------------~~~~l~~h~~--~v~~~~~~~~g~~las~~-~~~i  357 (360)
                                        .+..+..|..  .|++++|+|+|.+++++. ++.|
T Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i  418 (425)
T 1r5m_A          366 SRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEG  418 (425)
T ss_dssp             -------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCC
T ss_pred             eeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceE
Confidence                              8899999976  999999999999887665 4444

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.91  E-value=3.8e-23  Score=192.53  Aligned_cols=170  Identities=16%  Similarity=0.233  Sum_probs=140.0

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      +.....+..|..  .++.....+.+| ..+....|+|++.+|++|+.||.|++||+.++.+...+.+|.+.|.+++|+|+
T Consensus        74 ~~~d~~v~i~d~--~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~  150 (420)
T 3vl1_A           74 ARLDGHDFLFNT--IIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPS  150 (420)
T ss_dssp             EEETTEEEEEEC--CSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTT
T ss_pred             EEcCCcEEEEEe--cccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCC
Confidence            333444444443  344555566666 44455578999999999999999999999999999988999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  313 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d  313 (360)
                      +++|++|+.|++|++||+.++                            ..+..+.+|...|.+++|+|++++|++|+.|
T Consensus       151 ~~~l~s~s~d~~i~iwd~~~~----------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d  202 (420)
T 3vl1_A          151 GEALISSSQDMQLKIWSVKDG----------------------------SNPRTLIGHRATVTDIAIIDRGRNVLSASLD  202 (420)
T ss_dssp             SSEEEEEETTSEEEEEETTTC----------------------------CCCEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred             CCEEEEEeCCCeEEEEeCCCC----------------------------cCceEEcCCCCcEEEEEEcCCCCEEEEEcCC
Confidence            999999999999999999866                            3466788999999999999999999999999


Q ss_pred             CcEEEEECCCCeEEEEEec---CCCceEE---------------------EEEcCCCCEEEcccc
Q psy11015        314 RVANLFDVETGTILQSLTE---PGEAIRA---------------------AAGRTGGPIRASPLL  354 (360)
Q Consensus       314 g~i~iwd~~~~~~~~~l~~---h~~~v~~---------------------~~~~~~g~~las~~~  354 (360)
                      |.|++||+++++.+..+..   |...|.+                     ++|+|+|.+++++..
T Consensus       203 ~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  267 (420)
T 3vl1_A          203 GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV  267 (420)
T ss_dssp             SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET
T ss_pred             CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC
Confidence            9999999999999999875   3344444                     455789988887764

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.90  E-value=6.3e-22  Score=183.74  Aligned_cols=194  Identities=14%  Similarity=0.174  Sum_probs=137.9

Q ss_pred             CCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC-----------
Q psy11015        156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-----------  224 (360)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~-----------  224 (360)
                      ....+..|.   ..+..+..+.+|.+.|.+++|+|++.+|++++.||.|++||+.+++.+..+..+...           
T Consensus       128 ~dg~i~i~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (425)
T 1r5m_A          128 ENGELRLWN---KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG  204 (425)
T ss_dssp             TTSCEEEEE---TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred             CCCeEEEEe---CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence            334444554   566788899999999999999999999999999999999999988877766555444           


Q ss_pred             ----eEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCC---------CCCCC-----cccccccee
Q psy11015        225 ----VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESK---------EPDES-----SITLRTPVK  286 (360)
Q Consensus       225 ----v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-----~~~~~~~~~  286 (360)
                          +.+++|+|++ .+++++.|+.|++||+.++........+.........         ...+.     ......+..
T Consensus       205 ~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  283 (425)
T 1r5m_A          205 DGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN  283 (425)
T ss_dssp             -CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE
T ss_pred             CcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccce
Confidence                5555555543 3455555555555555544333332222111000000         00000     111224567


Q ss_pred             EeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        287 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       287 ~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      .+.+|...|.+++|+|++ ++++++.||.|++||+.+++.+..+..|...|++++|+|+|.+++++..
T Consensus       284 ~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  350 (425)
T 1r5m_A          284 CFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM  350 (425)
T ss_dssp             EECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET
T ss_pred             EecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC
Confidence            778899999999999999 9999999999999999999999999999999999999999999988774

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.90  E-value=2.2e-22  Score=188.78  Aligned_cols=179  Identities=20%  Similarity=0.310  Sum_probs=148.1

Q ss_pred             eeecCCeEEEeeecCcc-----ceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCC---eEEEEEeCCC
Q psy11015        152 LKVQTSKIVSSFKTSLL-----SCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG---KCVLQYSGHS  222 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~-----~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~  222 (360)
                      +.+...+.+..|.....     .......+.+|.+.|.+++|+| ++.+|++|+.||.|++||++++   .++..+.+|.
T Consensus       198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~  277 (430)
T 2xyi_A          198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT  277 (430)
T ss_dssp             EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred             EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence            33444555666665541     1233567889999999999999 6779999999999999999987   5788888999


Q ss_pred             cCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        223 GSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       223 ~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      +.|++++|+|++. ++++|+.||+|++||++..                           ..++..+.+|...|.+++|+
T Consensus       278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~---------------------------~~~~~~~~~h~~~v~~i~~s  330 (430)
T 2xyi_A          278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNL---------------------------KLKLHSFESHKDEIFQVQWS  330 (430)
T ss_dssp             SCEEEEEECSSCTTEEEEEETTSEEEEEETTCT---------------------------TSCSEEEECCSSCEEEEEEC
T ss_pred             CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC---------------------------CCCeEEeecCCCCEEEEEEC
Confidence            9999999999987 6889999999999999863                           13577888999999999999


Q ss_pred             CCCC-EEEEEECCCcEEEEECCC--------------CeEEEEEecCCCceEEEEEcCCCC-EEEccc-ccch
Q psy11015        302 SDGE-QVITASWDRVANLFDVET--------------GTILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAI  357 (360)
Q Consensus       302 p~g~-~l~tgs~dg~i~iwd~~~--------------~~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~i  357 (360)
                      |+++ +|++|+.||.|++||+..              ...+..+.+|...|++++|+|+++ ++++++ ++.|
T Consensus       331 p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i  403 (430)
T 2xyi_A          331 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIM  403 (430)
T ss_dssp             SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred             CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCE
Confidence            9985 689999999999999986              367778888999999999999998 666655 4444

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.90  E-value=8.4e-23  Score=189.72  Aligned_cols=178  Identities=19%  Similarity=0.243  Sum_probs=148.9

Q ss_pred             ecCCeEEEeeecCccc-------eeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCC----
Q psy11015        154 VQTSKIVSSFKTSLLS-------CYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGH----  221 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~-------~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h----  221 (360)
                      +..+..+..|......       ......+.+|.+.|.+++|+|+ +.+|++|+.||.|++||+++++++..+..|    
T Consensus       132 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~  211 (416)
T 2pm9_A          132 GGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNS  211 (416)
T ss_dssp             ECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSS
T ss_pred             EcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccccc
Confidence            3344455555554332       1223445789999999999999 789999999999999999999999999876    


Q ss_pred             --CcCeEEEEEeeCC-CEEEEEeCCC---cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCc
Q psy11015        222 --SGSVNSVRFLPNK-DLVLSASGDK---SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNV  294 (360)
Q Consensus       222 --~~~v~~i~~~p~~-~~l~s~s~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~  294 (360)
                        ...|.+++|+|++ .++++++.|+   .|++||++++.                           .+...+. +|...
T Consensus       212 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~---------------------------~~~~~~~~~~~~~  264 (416)
T 2pm9_A          212 GIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN---------------------------TPLQTLNQGHQKG  264 (416)
T ss_dssp             CCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT---------------------------SCSBCCCSCCSSC
T ss_pred             ccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC---------------------------CCcEEeecCccCc
Confidence              7889999999997 6899999998   99999998651                           2455566 89999


Q ss_pred             EEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCC-CEEEccc-ccchh
Q psy11015        295 VIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG-PIRASPL-LLAIR  358 (360)
Q Consensus       295 v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g-~~las~~-~~~ir  358 (360)
                      |.+++|+| ++++|++|+.||.|++||+.+++.+..+..|...|++++|+|++ .+++++. |+.||
T Consensus       265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~  331 (416)
T 2pm9_A          265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE  331 (416)
T ss_dssp             EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred             eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence            99999999 99999999999999999999999999999999999999999998 7777766 44443

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.90  E-value=5.9e-23  Score=194.06  Aligned_cols=153  Identities=10%  Similarity=0.034  Sum_probs=126.1

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc-----CeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-----SVNSVRFLPNKDLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~-----~v~~i~~~p~~~~l~s~s~d~~i~vwd~~  252 (360)
                      +|.+.|++++|+|+|..||+++.||+|++||...  ++..+. |..     .|.+++|+|+|++|++|+.||+|++||+.
T Consensus        83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~  159 (588)
T 2j04_A           83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR  159 (588)
T ss_dssp             SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence            5688999999999999999999999999999654  677777 665     49999999999999999999999999998


Q ss_pred             cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe----eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE--
Q psy11015        253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL----LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI--  326 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~--  326 (360)
                      ++....                     ...-.+.++    .+|...|.+++|+|+|  +++++.|+++++||+.++..  
T Consensus       160 ~~~l~~---------------------~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~  216 (588)
T 2j04_A          160 KNSENT---------------------PEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP  216 (588)
T ss_dssp             CCTTTC---------------------CCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC
T ss_pred             CCcccc---------------------ccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc
Confidence            662100                     000024554    5788899999999999  88999999999999988773  


Q ss_pred             -EEEEe-cCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        327 -LQSLT-EPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       327 -~~~l~-~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                       .+++. +|...|.+++|+  |..+|++.++.||
T Consensus       217 ~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIk  248 (588)
T 2j04_A          217 VSRMIQNASRRKITDLKIV--DYKVVLTCPGYVH  248 (588)
T ss_dssp             CEEEEECCCSSCCCCEEEE--TTEEEEECSSEEE
T ss_pred             ceeeecccccCcEEEEEEE--CCEEEEEeCCeEE
Confidence             35674 788899999999  6888888877664

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.90  E-value=4.3e-22  Score=187.83  Aligned_cols=172  Identities=14%  Similarity=0.087  Sum_probs=145.5

Q ss_pred             eecCCeEEEeeecCccceeeeeeee--cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE----EEeCCCcCeE
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL----QYSGHSGSVN  226 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~--~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~----~~~~h~~~v~  226 (360)
                      .+.....+.+|......+..+..+.  +|...|++++|+|++.+|++|+.||.|++|++.++....    .+.+|.+.|.
T Consensus       120 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~  199 (450)
T 2vdu_B          120 CADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLT  199 (450)
T ss_dssp             EEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEE
T ss_pred             EECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceE
Confidence            3445566666776533556666665  678999999999999999999999999999998876543    7788999999


Q ss_pred             EEEEeeC---CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeE-eeCCCCcEEEEEEcC
Q psy11015        227 SVRFLPN---KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWLS  302 (360)
Q Consensus       227 ~i~~~p~---~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~sp  302 (360)
                      +++|+|+   +.+|++|+.|++|++||+.++                            ..+.. +.+|...|.+++|+ 
T Consensus       200 ~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~----------------------------~~~~~~~~~h~~~v~~~~~s-  250 (450)
T 2vdu_B          200 DVHLIKDSDGHQFIITSDRDEHIKISHYPQC----------------------------FIVDKWLFGHKHFVSSICCG-  250 (450)
T ss_dssp             EEEEEECTTSCEEEEEEETTSCEEEEEESCT----------------------------TCEEEECCCCSSCEEEEEEC-
T ss_pred             EEEEcCCCCCCcEEEEEcCCCcEEEEECCCC----------------------------ceeeeeecCCCCceEEEEEC-
Confidence            9999999   999999999999999998766                            23444 55899999999999 


Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEecC-------------------------CCceEEEEEcCCCCEEEccc
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTEP-------------------------GEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h-------------------------~~~v~~~~~~~~g~~las~~  353 (360)
                      +|++|++|+.||.|++||+.+++++..+..+                         ...|.+++|+|++.+++++.
T Consensus       251 d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~  326 (450)
T 2vdu_B          251 KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV  326 (450)
T ss_dssp             STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence            9999999999999999999999998888632                         35799999999999888775

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.90  E-value=4.1e-22  Score=181.41  Aligned_cols=155  Identities=14%  Similarity=0.173  Sum_probs=134.8

Q ss_pred             eeecCCCCEEEEEECCC----CCEEEEEeCCCcEEEEECCCCeEEEEEeC-----CCcCeEEEEEeeC----CCEEEEEe
Q psy11015        175 SFSGHRDGVWDVAVRPG----QPVLGSASADRTVRLWSTQTGKCVLQYSG-----HSGSVNSVRFLPN----KDLVLSAS  241 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~----~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-----h~~~v~~i~~~p~----~~~l~s~s  241 (360)
                      ...+|.+.|++++|+|+    ...+++++.++.|++||+.++..+..+..     |...|.+++|+|+    +.+|++|+
T Consensus        13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~   92 (366)
T 3k26_A           13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG   92 (366)
T ss_dssp             EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred             eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence            34589999999999984    45677777788999999998877766654     5577999999999    67999999


Q ss_pred             CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEE
Q psy11015        242 GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFD  320 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd  320 (360)
                      .|+.|++||+.++                            ..+..+.+|...|.+++|+| ++.+|++|+.||.|++||
T Consensus        93 ~dg~i~v~d~~~~----------------------------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd  144 (366)
T 3k26_A           93 SRGIIRIINPITM----------------------------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWN  144 (366)
T ss_dssp             TTCEEEEECTTTC----------------------------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             CCCEEEEEEchhc----------------------------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence            9999999998766                            34667789999999999999 999999999999999999


Q ss_pred             CCCCeEEEEE---ecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        321 VETGTILQSL---TEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       321 ~~~~~~~~~l---~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      +++++.+..+   ..|...|++++|+|++.+++++. ++.|
T Consensus       145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  185 (366)
T 3k26_A          145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSL  185 (366)
T ss_dssp             TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCE
Confidence            9999999988   68999999999999999888776 4444

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.90  E-value=5.1e-22  Score=184.42  Aligned_cols=161  Identities=17%  Similarity=0.317  Sum_probs=137.6

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEe--CCCc
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSAS--GDKS  245 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s--~d~~  245 (360)
                      ....+..+.+|.+.|.+++|+|++.+|++|+.||.|++||+.++.++..+.+|.+.|.+++|+|++. ++++|+  .|+.
T Consensus       206 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~  285 (401)
T 4aez_A          206 ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ  285 (401)
T ss_dssp             SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE
T ss_pred             CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE
Confidence            3456788899999999999999999999999999999999999999999999999999999999764 566655  6999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE--CCCcEEEEECCC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVET  323 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--~dg~i~iwd~~~  323 (360)
                      |++||+.++.                            ++..+. |...|.+++|+|+++++++++  .||.|++||+.+
T Consensus       286 i~i~d~~~~~----------------------------~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~  336 (401)
T 4aez_A          286 IHFWNAATGA----------------------------RVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS  336 (401)
T ss_dssp             EEEEETTTCC----------------------------EEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred             EEEEECCCCC----------------------------EEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence            9999998762                            334443 567899999999999999954  899999999998


Q ss_pred             CeEEE--EEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        324 GTILQ--SLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       324 ~~~~~--~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +....  .+.+|...|++++|+|+|.++++++ |+.||
T Consensus       337 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~  374 (401)
T 4aez_A          337 SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLK  374 (401)
T ss_dssp             TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEE
T ss_pred             ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence            76554  4678999999999999999888776 44443

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.89  E-value=1.1e-22  Score=190.68  Aligned_cols=198  Identities=13%  Similarity=0.142  Sum_probs=151.7

Q ss_pred             ecCCeEEEeeecCccceeeeeeeec--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEE
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSG--HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRF  230 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~--h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~  230 (360)
                      +.....+..|..  .++.++..+.+  |.+.|++++|+|++.+|++|+.||+|++||+++++++..+. +|...|.+++|
T Consensus       188 ~~~d~~i~iwd~--~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~  265 (437)
T 3gre_A          188 LTNLSRVIIFDI--RTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV  265 (437)
T ss_dssp             EETTSEEEEEET--TTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred             EeCCCeEEEEeC--CCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence            333344444443  45778888888  89999999999999999999999999999999999999986 78889999976


Q ss_pred             ee----CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC--CCCcEEEEEEcCCC
Q psy11015        231 LP----NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG--HSNVVIAADWLSDG  304 (360)
Q Consensus       231 ~p----~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~i~~sp~g  304 (360)
                      +|    ++.++++|+.|++|++||+.++.....+..+..........+.....    .-..+.+  |...|++++|+ ++
T Consensus       266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~v~~l~~~-~~  340 (437)
T 3gre_A          266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL----EELNFCGIRSLNALSTISVS-ND  340 (437)
T ss_dssp             CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG----GGCCCCCCCSGGGGCCEEEE-TT
T ss_pred             ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc----ccceecccccCCceEEEEEC-Cc
Confidence            65    57799999999999999999887766655443222211111111101    0112444  88999999999 78


Q ss_pred             CEEEEEECCCcEEEEECCCCeEEEEEec-------------------------------------CCCceEEEEEcCC--
Q psy11015        305 EQVITASWDRVANLFDVETGTILQSLTE-------------------------------------PGEAIRAAAGRTG--  345 (360)
Q Consensus       305 ~~l~tgs~dg~i~iwd~~~~~~~~~l~~-------------------------------------h~~~v~~~~~~~~--  345 (360)
                      ++|++|+.||.|++||+.+++.+..+.+                                     |...|++++|+++  
T Consensus       341 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~  420 (437)
T 3gre_A          341 KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDE  420 (437)
T ss_dssp             EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSS
T ss_pred             eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCC
Confidence            8999999999999999999887777765                                     8899999999988  


Q ss_pred             CCEEEccc-ccchh
Q psy11015        346 GPIRASPL-LLAIR  358 (360)
Q Consensus       346 g~~las~~-~~~ir  358 (360)
                      +.+++|+. ++.||
T Consensus       421 ~~~l~s~~~dG~I~  434 (437)
T 3gre_A          421 TPLLVACDNSGLIG  434 (437)
T ss_dssp             SEEEEEEETTSCEE
T ss_pred             ceEEEEEcCCceEE
Confidence            77888776 45454

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.89  E-value=2.7e-22  Score=185.23  Aligned_cols=182  Identities=14%  Similarity=0.106  Sum_probs=150.5

Q ss_pred             eeeeecCCeEEEeeecCccc----eeeeeeeecCCCCEEEEEECCC----C---CEEEEEeCCCcEEEEECCCCeE----
Q psy11015        150 NKLKVQTSKIVSSFKTSLLS----CYKIRSFSGHRDGVWDVAVRPG----Q---PVLGSASADRTVRLWSTQTGKC----  214 (360)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~h~~~V~~l~~~~~----~---~~l~sgs~Dg~v~iwd~~~~~~----  214 (360)
                      ..+.+..+..+.+|......    ...+..+.+|...|++++|+|+    +   .+|++|+.||.|++||+.++..    
T Consensus        28 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~  107 (397)
T 1sq9_A           28 FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV  107 (397)
T ss_dssp             EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCE
T ss_pred             eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccc
Confidence            44455666777777765543    4478888999999999999999    9   9999999999999999998877    


Q ss_pred             -EEEEeCC-----CcCeEEEEEe----eCCCE-EEEEeCCCcEEEEEccc------CeeEeeeCCCCCCCCCCCCCCCCC
Q psy11015        215 -VLQYSGH-----SGSVNSVRFL----PNKDL-VLSASGDKSVHIWQAVI------NWECLVSNNDNDSDLDESKEPDES  277 (360)
Q Consensus       215 -~~~~~~h-----~~~v~~i~~~----p~~~~-l~s~s~d~~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~  277 (360)
                       +..+.+|     ...|.+++|+    |++.+ |++|+.|+.|++||+.+      +...                    
T Consensus       108 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------------  167 (397)
T 1sq9_A          108 IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL--------------------  167 (397)
T ss_dssp             EEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT--------------------
T ss_pred             cceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee--------------------
Confidence             8889988     5899999999    99999 99999999999999986      3111                    


Q ss_pred             ccccccceeEe-------eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec---C---CCceEEEEEcC
Q psy11015        278 SITLRTPVKEL-------LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE---P---GEAIRAAAGRT  344 (360)
Q Consensus       278 ~~~~~~~~~~~-------~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~---h---~~~v~~~~~~~  344 (360)
                         ...+...+       ..|...|.+++|+|++ ++++|+.||.|++||+++++.+..+..   |   ...|++++|+|
T Consensus       168 ---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~  243 (397)
T 1sq9_A          168 ---NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP  243 (397)
T ss_dssp             ---CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred             ---eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence               01122244       4588899999999999 999999999999999999999999998   8   99999999999


Q ss_pred             CCCEEEccccc
Q psy11015        345 GGPIRASPLLL  355 (360)
Q Consensus       345 ~g~~las~~~~  355 (360)
                      ++.+++++...
T Consensus       244 ~~~~l~~~~~d  254 (397)
T 1sq9_A          244 QGSLLAIAHDS  254 (397)
T ss_dssp             STTEEEEEEEE
T ss_pred             CCCEEEEEecC
Confidence            99999887753

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.89  E-value=4.4e-22  Score=200.80  Aligned_cols=172  Identities=20%  Similarity=0.259  Sum_probs=151.7

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      +..+..+.+|..  .++..+..+.+|.+.|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|+
T Consensus        31 ~~~~g~v~iwd~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~  108 (814)
T 3mkq_A           31 TLYSGRVEIWNY--ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPT  108 (814)
T ss_dssp             EETTSEEEEEET--TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred             EeCCCEEEEEEC--CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCC
Confidence            334455555554  457788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEEC
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASW  312 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~  312 (360)
                      ++++++|+.|++|++||+.++.                           .....+.+|...|.+++|+| ++..+++|+.
T Consensus       109 ~~~l~~~~~dg~i~vw~~~~~~---------------------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~  161 (814)
T 3mkq_A          109 KPYVLSGSDDLTVKLWNWENNW---------------------------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCL  161 (814)
T ss_dssp             SSEEEEEETTSEEEEEEGGGTS---------------------------EEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred             CCEEEEEcCCCEEEEEECCCCc---------------------------eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence            9999999999999999987652                           23566788999999999999 8899999999


Q ss_pred             CCcEEEEECCCCeEEEEEecCC-CceEEEEEcC--CCCEEEcccc
Q psy11015        313 DRVANLFDVETGTILQSLTEPG-EAIRAAAGRT--GGPIRASPLL  354 (360)
Q Consensus       313 dg~i~iwd~~~~~~~~~l~~h~-~~v~~~~~~~--~g~~las~~~  354 (360)
                      ||.|++||+.++.....+..+. ..+.+++|+|  +|.+++++..
T Consensus       162 dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~  206 (814)
T 3mkq_A          162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD  206 (814)
T ss_dssp             TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT
T ss_pred             CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC
Confidence            9999999999888877777654 8999999999  8988887764

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.89  E-value=2.6e-21  Score=174.53  Aligned_cols=172  Identities=20%  Similarity=0.249  Sum_probs=139.7

Q ss_pred             CCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCC--CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQ--PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~--~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      ....+..|... ........+.+|.+.|.+++|++++  .++++++.|++|++||+.+++++..+.+|.+.|++++|+|+
T Consensus       148 ~d~~~~~~d~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~  226 (340)
T 4aow_A          148 RDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD  226 (340)
T ss_dssp             TTSCEEEECTT-SCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred             CCCeEEEEEeC-CCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCC
Confidence            33344444332 2334456678899999999998865  47899999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD  313 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d  313 (360)
                      +++|++|+.|++|++||+.+..                            ++..+.+ ...|.+++|+|++.+ ++++.|
T Consensus       227 ~~~l~s~s~Dg~i~iwd~~~~~----------------------------~~~~~~~-~~~v~~~~~~~~~~~-~~~~~d  276 (340)
T 4aow_A          227 GSLCASGGKDGQAMLWDLNEGK----------------------------HLYTLDG-GDIINALCFSPNRYW-LCAATG  276 (340)
T ss_dssp             SSEEEEEETTCEEEEEETTTTE----------------------------EEEEEEC-SSCEEEEEECSSSSE-EEEEET
T ss_pred             CCEEEEEeCCCeEEEEEeccCc----------------------------eeeeecC-CceEEeeecCCCCce-eeccCC
Confidence            9999999999999999998763                            3444443 467999999998755 456679


Q ss_pred             CcEEEEECCCCeEEEEEe---------cCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        314 RVANLFDVETGTILQSLT---------EPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       314 g~i~iwd~~~~~~~~~l~---------~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +.|++||++++..+..+.         +|...|++++|+|+|++|+|++ |+.||
T Consensus       277 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~  331 (340)
T 4aow_A          277 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR  331 (340)
T ss_dssp             TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence            999999999988777654         5788999999999999988876 55554

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.89  E-value=1.2e-21  Score=174.67  Aligned_cols=159  Identities=23%  Similarity=0.307  Sum_probs=140.8

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      ..++.+++.+|.+.|++++| |++.+|++|+.||.|++||+.++.....+..|.+.|.+++|+|++.++++|+.|+.+++
T Consensus         7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~   85 (313)
T 3odt_A            7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING   85 (313)
T ss_dssp             CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred             cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence            34678899999999999999 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ  328 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~  328 (360)
                      |++...                         ....+...+.+|...|.+++|  +++++++|+.||.|++||  .+..+.
T Consensus        86 ~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~  136 (313)
T 3odt_A           86 VPLFAT-------------------------SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVY  136 (313)
T ss_dssp             EETTCC-------------------------TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEE
T ss_pred             EEeeec-------------------------CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEE
Confidence            998654                         122356778899999999999  678999999999999999  788889


Q ss_pred             EEecCCCceEEEEEcC-CCCEEEccc-ccch
Q psy11015        329 SLTEPGEAIRAAAGRT-GGPIRASPL-LLAI  357 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~-~g~~las~~-~~~i  357 (360)
                      .+..|...+.+++|+| ++.+++++. ++.|
T Consensus       137 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i  167 (313)
T 3odt_A          137 NLQAHNASVWDAKVVSFSENKFLTASADKTI  167 (313)
T ss_dssp             EEECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred             ecccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence            9999999999999988 788777766 4443

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.89  E-value=2.6e-21  Score=176.15  Aligned_cols=158  Identities=13%  Similarity=0.043  Sum_probs=141.8

Q ss_pred             eeeeeecCCC--CEEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        172 KIRSFSGHRD--GVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       172 ~~~~l~~h~~--~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      .+..+.+|.+  .+.+++|+|+++.|++|+.||.|++||+.+ +..+..+.+|.+.|.+++|+|++.+|++++.|+.|++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  244 (369)
T 3zwl_B          165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFL  244 (369)
T ss_dssp             CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEE
Confidence            4556677777  999999999999999999999999999998 7899999999999999999999999999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC--------------
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR--------------  314 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg--------------  314 (360)
                      ||+.++.                            .+..+. +...+.+++|+|+++++++++.++              
T Consensus       245 ~d~~~~~----------------------------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  295 (369)
T 3zwl_B          245 VDVSTLQ----------------------------VLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF  295 (369)
T ss_dssp             EETTTCC----------------------------EEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred             EECCCCc----------------------------eeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence            9998763                            233343 678899999999999999999988              


Q ss_pred             cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        315 VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       315 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .+++||..+++.+..+.+|...|++++|+|+|.++++++ |+.||
T Consensus       296 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~  340 (369)
T 3zwl_B          296 EARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR  340 (369)
T ss_dssp             EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             eeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence            899999999999999999999999999999999988876 55543

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.89  E-value=2.8e-22  Score=182.26  Aligned_cols=174  Identities=7%  Similarity=-0.045  Sum_probs=140.7

Q ss_pred             eeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC---------CCeEEEEEe-
Q psy11015        150 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---------TGKCVLQYS-  219 (360)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~---------~~~~~~~~~-  219 (360)
                      ..+.+..+..+..|...  ++..+..+.  .+.|.++.|+|.   +++|+.|++|++|+..         +++.+..+. 
T Consensus        50 ~l~sg~~Dg~v~iwd~~--~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~  122 (343)
T 3lrv_A           50 VCMCRCEDGALHFTQLK--DSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV  122 (343)
T ss_dssp             EEEEEEETTEEEEEEES--SSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred             EEEEECCCCcEEEEECC--CCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence            44556666677666654  344455554  467888889988   9999999999999665         555555554 


Q ss_pred             CCCcCeEEEEEee--CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEE
Q psy11015        220 GHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVI  296 (360)
Q Consensus       220 ~h~~~v~~i~~~p--~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~  296 (360)
                      +|.+.|.+++|+|  +++++++|+.|++|++||+.++..                            .... ..|...|.
T Consensus       123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~----------------------------~~~~~~~~~~~i~  174 (343)
T 3lrv_A          123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ----------------------------YIVHSAKSDVEYS  174 (343)
T ss_dssp             CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE----------------------------EEEECCCSSCCCC
T ss_pred             CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE----------------------------EEEEecCCCCceE
Confidence            6778999999999  999999999999999999987732                            2223 23556799


Q ss_pred             EEEEcCCCCEEEEEECCCcEEEEECCCCeEE-EEEec-CCCceEEEEEcCCCCEEEcccccchh
Q psy11015        297 AADWLSDGEQVITASWDRVANLFDVETGTIL-QSLTE-PGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~-~~l~~-h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      +++|+|+|.+|++|+.||.|++||+++++.+ ..+.. |..+|++++|+|+|.++++++++.||
T Consensus       175 ~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~  238 (343)
T 3lrv_A          175 SGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVV  238 (343)
T ss_dssp             EEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEE
T ss_pred             EEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEE
Confidence            9999999999999999999999999999887 78888 99999999999999999999877654

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.89  E-value=3.6e-22  Score=187.29  Aligned_cols=179  Identities=18%  Similarity=0.204  Sum_probs=132.1

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-----------EEEEEeCCC------------cCeEEEEEeeCC
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----------CVLQYSGHS------------GSVNSVRFLPNK  234 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-----------~~~~~~~h~------------~~v~~i~~~p~~  234 (360)
                      .|.+.|++++|+|++.+|++|+.||.|+|||+.++.           +...+.+|.            +.|.+++|+|++
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            467899999999999999999999999999999876           588899998            889999999998


Q ss_pred             --CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcc-----------ccccceeE-eeCCCCcEEEEEE
Q psy11015        235 --DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSI-----------TLRTPVKE-LLGHSNVVIAADW  300 (360)
Q Consensus       235 --~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~h~~~v~~i~~  300 (360)
                        .+|++++.|++|++||+..+.........................           ....+... ..+|...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              799999999999999998765432211111100000000000000           00112223 3589999999999


Q ss_pred             cCCCCEEEEEECCCcEEEEECCC-CeEEEE-------EecCCCceEEEEEcCCC-CEEEccc-ccch
Q psy11015        301 LSDGEQVITASWDRVANLFDVET-GTILQS-------LTEPGEAIRAAAGRTGG-PIRASPL-LLAI  357 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd~~~-~~~~~~-------l~~h~~~v~~~~~~~~g-~~las~~-~~~i  357 (360)
                      +|+|++|++| .||.|++||+.+ +..+..       +.+|...|++++|+|+| .+++++. |+.|
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i  251 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI  251 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence            9999999999 799999999984 445443       45789999999999998 8888776 4444

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.89  E-value=4.8e-22  Score=181.77  Aligned_cols=187  Identities=16%  Similarity=0.147  Sum_probs=133.7

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEE
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVH  247 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~  247 (360)
                      +...+.++.+|.+.|++++|+|++.+|++|+.|+ +++||+.++........  ..+..+++.++++.+ ++|+.|++|+
T Consensus         8 ~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~   84 (355)
T 3vu4_A            8 TRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVH   84 (355)
T ss_dssp             -----------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred             ccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEE
Confidence            3455667789999999999999999999998775 78999998877665542  257788888888877 5678889999


Q ss_pred             EEEcccCeeEeeeCCCCC------------------------CCC--CC-----------------CC--CCCCCccccc
Q psy11015        248 IWQAVINWECLVSNNDND------------------------SDL--DE-----------------SK--EPDESSITLR  282 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~------------------------~~~--~~-----------------~~--~~~~~~~~~~  282 (360)
                      +||+.++.....+.....                        ...  ..                 ..  .........+
T Consensus        85 iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iw  164 (355)
T 3vu4_A           85 IWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHIT  164 (355)
T ss_dssp             EEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEE
T ss_pred             EEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEE
Confidence            999988865544322110                        000  00                 00  1111111110


Q ss_pred             --------------------cc-eeEeeCCCCcEEEEEEcCCCCEEEEEECCCc-EEEEECCCCeEEEEEe-c-CCCceE
Q psy11015        283 --------------------TP-VKELLGHSNVVIAADWLSDGEQVITASWDRV-ANLFDVETGTILQSLT-E-PGEAIR  338 (360)
Q Consensus       283 --------------------~~-~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~-i~iwd~~~~~~~~~l~-~-h~~~v~  338 (360)
                                          .+ +..+.+|...|++++|+|+|++|++|+.||+ |++||+++++++..+. + |...|+
T Consensus       165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~  244 (355)
T 3vu4_A          165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVV  244 (355)
T ss_dssp             ECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEE
T ss_pred             ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEE
Confidence                                12 6778899999999999999999999999998 9999999999999998 5 999999


Q ss_pred             EEEEcCCCCEEEcccc-cchh
Q psy11015        339 AAAGRTGGPIRASPLL-LAIR  358 (360)
Q Consensus       339 ~~~~~~~g~~las~~~-~~ir  358 (360)
                      +++|+|+|.++++++. +.||
T Consensus       245 ~~~~s~~~~~l~s~s~d~~v~  265 (355)
T 3vu4_A          245 DMKWSTDGSKLAVVSDKWTLH  265 (355)
T ss_dssp             EEEECTTSCEEEEEETTCEEE
T ss_pred             EEEECCCCCEEEEEECCCEEE
Confidence            9999999999988764 4443

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.89  E-value=3.1e-22  Score=185.82  Aligned_cols=181  Identities=15%  Similarity=0.184  Sum_probs=144.8

Q ss_pred             cCCeEEEeeecCcccee-eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC----CeEEEEEeCCCcCeEEEE
Q psy11015        155 QTSKIVSSFKTSLLSCY-KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT----GKCVLQYSGHSGSVNSVR  229 (360)
Q Consensus       155 ~~~~~~~~~~~~~~~~~-~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~----~~~~~~~~~h~~~v~~i~  229 (360)
                      .....+..|........ .+..+ .|.+.|++++|+|++.+|++|+.||.|++||+.+    ...+..+.+|.+.|.+++
T Consensus        42 ~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~  120 (416)
T 2pm9_A           42 STDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVK  120 (416)
T ss_dssp             CCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEE
T ss_pred             CCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEE
Confidence            34445556665543322 33333 6899999999999999999999999999999987    458889999999999999


Q ss_pred             EeeC-CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-CCEE
Q psy11015        230 FLPN-KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQV  307 (360)
Q Consensus       230 ~~p~-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-g~~l  307 (360)
                      |+|+ +.+|++++.|++|++||+.++.....                   .........+.+|...|.+++|+|+ +.++
T Consensus       121 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  181 (416)
T 2pm9_A          121 FNAKQDNVLASGGNNGEIFIWDMNKCTESPS-------------------NYTPLTPGQSMSSVDEVISLAWNQSLAHVF  181 (416)
T ss_dssp             ECSSSTTBEEEECSSSCEEBCBTTTTSSCTT-------------------TCCCBCCCCSCCSSCCCCEEEECSSCTTEE
T ss_pred             EcCCCCCEEEEEcCCCeEEEEECCCCccccc-------------------cccccccccccCCCCCeeEEEeCCCCCcEE
Confidence            9998 89999999999999999987631000                   0000012234578999999999999 7899


Q ss_pred             EEEECCCcEEEEECCCCeEEEEEecC------CCceEEEEEcCCC-CEEEccccc
Q psy11015        308 ITASWDRVANLFDVETGTILQSLTEP------GEAIRAAAGRTGG-PIRASPLLL  355 (360)
Q Consensus       308 ~tgs~dg~i~iwd~~~~~~~~~l~~h------~~~v~~~~~~~~g-~~las~~~~  355 (360)
                      ++|+.||.|++||+++++.+..+..|      ...|++++|+|++ .+++++...
T Consensus       182 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  236 (416)
T 2pm9_A          182 ASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS  236 (416)
T ss_dssp             EEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred             EEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC
Confidence            99999999999999999999999876      7899999999997 577776654

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.89  E-value=1.2e-21  Score=177.86  Aligned_cols=180  Identities=13%  Similarity=0.120  Sum_probs=141.3

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCC----CEEEEE----ECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCe
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRD----GVWDVA----VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV  225 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~----~V~~l~----~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v  225 (360)
                      +..+..+..|...... ..+..+..|.+    .|++++    |+|++.+|++|+.||.|++||+++++.... ..|...|
T Consensus       135 ~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v  212 (357)
T 3i2n_A          135 GSRDGTVKVWDPRQKD-DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGV  212 (357)
T ss_dssp             EETTSCEEEECTTSCS-SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCE
T ss_pred             EeCCCeEEEEeCCCCC-CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCce
Confidence            3444444455443221 25666666655    899998    788999999999999999999999987555 4589999


Q ss_pred             EEEEEee---CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC
Q psy11015        226 NSVRFLP---NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  302 (360)
Q Consensus       226 ~~i~~~p---~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp  302 (360)
                      .+++|+|   ++.++++|+.|+.|++||++++.....                       -....+.+|...|.+++|+|
T Consensus       213 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-----------------------~~~~~~~~~~~~v~~~~~~~  269 (357)
T 3i2n_A          213 CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG-----------------------FASVSEKAHKSTVWQVRHLP  269 (357)
T ss_dssp             EEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE-----------------------EEEEEEECCSSCEEEEEEET
T ss_pred             EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc-----------------------eeeeccCCCcCCEEEEEECC
Confidence            9999999   899999999999999999886522110                       01224458999999999999


Q ss_pred             CCC-EEEEEECCCcEEEEECCCC-------------------eEEEEEecCCCceEEEEEcCCCCEEE-ccc-ccchh
Q psy11015        303 DGE-QVITASWDRVANLFDVETG-------------------TILQSLTEPGEAIRAAAGRTGGPIRA-SPL-LLAIR  358 (360)
Q Consensus       303 ~g~-~l~tgs~dg~i~iwd~~~~-------------------~~~~~l~~h~~~v~~~~~~~~g~~la-s~~-~~~ir  358 (360)
                      ++. ++++|+.||.|++||++++                   ..+..+.+|..+|++++|+|+|.+++ |++ |+.||
T Consensus       270 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~  347 (357)
T 3i2n_A          270 QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR  347 (357)
T ss_dssp             TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred             CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence            998 8999999999999998754                   46788899999999999999998776 454 66654

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.89  E-value=2.9e-22  Score=200.86  Aligned_cols=160  Identities=18%  Similarity=0.215  Sum_probs=135.2

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEEEeCCCcCeEEEEEeeC--CCEEEEEeCCCcEEE
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFLPN--KDLVLSASGDKSVHI  248 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~--~~~~~~~~~~h~~~v~~i~~~p~--~~~l~s~s~d~~i~v  248 (360)
                      +..+.||.+.|++++|+|++++|++|+.||+|+|||+.  ++..+..+.+|.+.|++++|+|+  ++++++|+.||+|++
T Consensus         2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v   81 (753)
T 3jro_A            2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI   81 (753)
T ss_dssp             ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred             eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence            45678999999999999999999999999999999998  55788899999999999999988  999999999999999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCC--
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETG--  324 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~--  324 (360)
                      ||+.++..                          .....+.+|...|.+++|+|+  +.++++|+.||.|++||++++  
T Consensus        82 wd~~~~~~--------------------------~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~  135 (753)
T 3jro_A           82 WKEENGRW--------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT  135 (753)
T ss_dssp             EEEETTEE--------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC
T ss_pred             EECCCCcc--------------------------cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC
Confidence            99987631                          245677889999999999999  999999999999999999877  


Q ss_pred             eEEEEEecCCCceEEEEEcC-------------CCCEEEccc-ccchh
Q psy11015        325 TILQSLTEPGEAIRAAAGRT-------------GGPIRASPL-LLAIR  358 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~-------------~g~~las~~-~~~ir  358 (360)
                      .....+.+|...|++++|+|             ++.++++++ ++.||
T Consensus       136 ~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~  183 (753)
T 3jro_A          136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK  183 (753)
T ss_dssp             CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEE
T ss_pred             cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEE
Confidence            34456778999999999999             477666665 55553

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.89  E-value=3.7e-22  Score=188.30  Aligned_cols=157  Identities=13%  Similarity=0.073  Sum_probs=135.1

Q ss_pred             eecCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECC--CCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        176 FSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQ--TGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~--~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      ..+|.+.|++++|+|++++| ++|+.||+|++||+.  ++.++..+.  +|...|.+++|+|++.+|++|+.|+.+++|+
T Consensus        98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~  177 (450)
T 2vdu_B           98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID  177 (450)
T ss_dssp             --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence            45788999999999999985 999999999999999  888888876  5678999999999999999999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC---CCEEEEEECCCcEEEEECCCCeEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---GEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~---g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +..+....                        .+...+.+|...|++++|+|+   +++|++|+.|+.|++||+.++..+
T Consensus       178 ~~~~~~~~------------------------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~  233 (450)
T 2vdu_B          178 INSIPEEK------------------------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV  233 (450)
T ss_dssp             TTSCCCSS------------------------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE
T ss_pred             cCCccccc------------------------ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee
Confidence            87652110                        023456789999999999999   999999999999999999999888


Q ss_pred             EE-EecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        328 QS-LTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       328 ~~-l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      .. +.+|...|++++|+ +|.++++++ |+.|
T Consensus       234 ~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v  264 (450)
T 2vdu_B          234 DKWLFGHKHFVSSICCG-KDYLLLSAGGDDKI  264 (450)
T ss_dssp             EEECCCCSSCEEEEEEC-STTEEEEEESSSEE
T ss_pred             eeeecCCCCceEEEEEC-CCCEEEEEeCCCeE
Confidence            77 55899999999999 999888876 4443

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.88  E-value=2.8e-21  Score=203.72  Aligned_cols=136  Identities=27%  Similarity=0.414  Sum_probs=124.3

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee--CCCEEEEEeCCC
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDK  244 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~  244 (360)
                      ..++..+.++.+|.+.|.+++|+|++.+|++|+.||+|++||+.+++++..+.+|.+.|.+++|+|  ++.++++|+.|+
T Consensus       644 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~  723 (1249)
T 3sfz_A          644 AETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF  723 (1249)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred             CCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence            356778899999999999999999999999999999999999999999999999999999999999  456899999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      +|++||+.++                            .....+.+|.+.|++++|+|+|+++++|+.||.|++||+.++
T Consensus       724 ~v~vwd~~~~----------------------------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~  775 (1249)
T 3sfz_A          724 FLKLWDLNQK----------------------------ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA  775 (1249)
T ss_dssp             CEEEEETTSS----------------------------SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred             eEEEEECCCc----------------------------chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence            9999999876                            346677899999999999999999999999999999999887


Q ss_pred             eEEEEE
Q psy11015        325 TILQSL  330 (360)
Q Consensus       325 ~~~~~l  330 (360)
                      .....+
T Consensus       776 ~~~~~~  781 (1249)
T 3sfz_A          776 NERKSI  781 (1249)
T ss_dssp             EEEEEE
T ss_pred             ccccee
Confidence            765554

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.88  E-value=1.7e-21  Score=184.16  Aligned_cols=154  Identities=9%  Similarity=0.062  Sum_probs=128.8

Q ss_pred             eeeeeecCCC-----CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-------EEEEE----eCCCcCeEEEEEeeCCC
Q psy11015        172 KIRSFSGHRD-----GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-------CVLQY----SGHSGSVNSVRFLPNKD  235 (360)
Q Consensus       172 ~~~~l~~h~~-----~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-------~~~~~----~~h~~~v~~i~~~p~~~  235 (360)
                      ++..+. |..     .|.+++|+|+|++|++|+.||+|+|||+.++.       .+.++    .+|.+.|.+++|+|+| 
T Consensus       117 ~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-  194 (588)
T 2j04_A          117 MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-  194 (588)
T ss_dssp             EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-
T ss_pred             eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-
Confidence            666677 766     59999999999999999999999999999875       36776    6777899999999999 


Q ss_pred             EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEECCC
Q psy11015        236 LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDR  314 (360)
Q Consensus       236 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~dg  314 (360)
                       +++++.|++|++||+..+..                         .+...++ .+|...|.+++|+  |..+|+++ +|
T Consensus       195 -Laass~D~tVrlWd~~~~~~-------------------------~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~  245 (588)
T 2j04_A          195 -LVAALSNNSVFSMTVSASSH-------------------------QPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG  245 (588)
T ss_dssp             -EEEEETTCCEEEECCCSSSS-------------------------CCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS
T ss_pred             -EEEEeCCCeEEEEECCCCcc-------------------------ccceeeecccccCcEEEEEEE--CCEEEEEe-CC
Confidence             88899999999999876521                         0123456 4788999999999  68999887 69


Q ss_pred             cEEEEECCCCeEEEEEecCCCceEEEEE--cCCCCEEEccc-ccc
Q psy11015        315 VANLFDVETGTILQSLTEPGEAIRAAAG--RTGGPIRASPL-LLA  356 (360)
Q Consensus       315 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~--~~~g~~las~~-~~~  356 (360)
                      +|++||+.+++......+|.+.|.+++|  +|+|..++++. ++.
T Consensus       246 tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~  290 (588)
T 2j04_A          246 YVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY  290 (588)
T ss_dssp             EEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred             eEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence            9999999988774444489999999999  99999888888 443

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.88  E-value=2.1e-22  Score=182.04  Aligned_cols=153  Identities=12%  Similarity=0.113  Sum_probs=132.7

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIW  249 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vw  249 (360)
                      ....+|.+.|++++|+|++.+|++|+.||.|++|++.++.   ....+.+|...|.+++|+|++. +|++|+.|+.|++|
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w   84 (342)
T 1yfq_A            5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV   84 (342)
T ss_dssp             ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred             ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence            3456899999999999999999999999999999998876   3455568999999999999999 99999999999999


Q ss_pred             Ec-ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC--CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC---
Q psy11015        250 QA-VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG--HSNVVIAADWLSDGEQVITASWDRVANLFDVET---  323 (360)
Q Consensus       250 d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~---  323 (360)
                      |+ .++                             ....+.+  |...|.+++|+| +.++++++.||.|++||+++   
T Consensus        85 d~~~~~-----------------------------~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~  134 (342)
T 1yfq_A           85 DLIGSP-----------------------------SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGD  134 (342)
T ss_dssp             CSSSSS-----------------------------SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred             EeccCC-----------------------------ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccc
Confidence            98 765                             2356677  999999999999 99999999999999999987   


Q ss_pred             ------CeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        324 ------GTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       324 ------~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                            ++++..+. |...|.+++|+|++ +++++.++.|+
T Consensus       135 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~  173 (342)
T 1yfq_A          135 GVIAVKNLNSNNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQ  173 (342)
T ss_dssp             BCEEEEESCSSSSS-SCCCEEEEEECSSE-EEEEESTTEEE
T ss_pred             ccccccCCeeeEEe-eCCceEEEEecCCc-EEEEeCCCeEE
Confidence                  76666666 88999999999998 65555565543

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.88  E-value=5.6e-22  Score=202.11  Aligned_cols=170  Identities=11%  Similarity=0.049  Sum_probs=135.2

Q ss_pred             eeeeecCCeEEEeeecCccceeeee----eee-----cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--------
Q psy11015        150 NKLKVQTSKIVSSFKTSLLSCYKIR----SFS-----GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--------  212 (360)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~----~l~-----~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--------  212 (360)
                      ....++.++.+..|+..........    .+.     +|...|++++|+|++.+||+|+.||+|+|||+.++        
T Consensus       449 ~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~  528 (902)
T 2oaj_A          449 AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENR  528 (902)
T ss_dssp             EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC------
T ss_pred             EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCcccc
Confidence            3455667777778876543211001    122     89999999999999999999999999999999765        


Q ss_pred             -------------------------------------eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015        213 -------------------------------------KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       213 -------------------------------------~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                                                           +++..+.+|.+.|++++|+|+| +|++|+.|++|+|||+.++.
T Consensus       529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~  607 (902)
T 2oaj_A          529 PESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA  607 (902)
T ss_dssp             ---------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTE
T ss_pred             CCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe
Confidence                                                 3578889999999999999999 99999999999999987653


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEc-----CCC---CEEEEEECCCcEEEEEC---CC
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWL-----SDG---EQVITASWDRVANLFDV---ET  323 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~s-----p~g---~~l~tgs~dg~i~iwd~---~~  323 (360)
                      ....                       ..+..+. +|...|++++|+     |||   .+|++|+.||+|++||+   .+
T Consensus       608 ~~~~-----------------------~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~  664 (902)
T 2oaj_A          608 IIYM-----------------------ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASG  664 (902)
T ss_dssp             EEEE-----------------------EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGG
T ss_pred             EEEE-----------------------eehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCC
Confidence            2210                       0112343 899999999999     885   89999999999999999   78


Q ss_pred             CeEEEEEecC-----CCceEEEE-Ec
Q psy11015        324 GTILQSLTEP-----GEAIRAAA-GR  343 (360)
Q Consensus       324 ~~~~~~l~~h-----~~~v~~~~-~~  343 (360)
                      |++...+.+|     .++|.+++ |+
T Consensus       665 g~~~~~~~~~~~~~~~~~v~~i~~~~  690 (902)
T 2oaj_A          665 GKFDVQLMDITNVTSKGPIHKIDAFS  690 (902)
T ss_dssp             GCEEEEEEEEEECCSSCCCCEEEEEE
T ss_pred             CcEEEEecCceecCCCCceEEEEeEe
Confidence            8888888776     36777776 65

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.88  E-value=7.8e-22  Score=179.09  Aligned_cols=173  Identities=12%  Similarity=0.152  Sum_probs=139.7

Q ss_pred             ecCCeEEEeeecCcccee-eeeeeecCCCCEEEEE------ECCCCCEEEEEeCCCcEEEEECCCCe-EEEEEeCCCc--
Q psy11015        154 VQTSKIVSSFKTSLLSCY-KIRSFSGHRDGVWDVA------VRPGQPVLGSASADRTVRLWSTQTGK-CVLQYSGHSG--  223 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~-~~~~l~~h~~~V~~l~------~~~~~~~l~sgs~Dg~v~iwd~~~~~-~~~~~~~h~~--  223 (360)
                      +.....+..|...  .+. .+..+.+|.+.|.+++      |+|+++.|++|+.||.|++||+.++. ++..+..|.+  
T Consensus        86 ~~~dg~i~iwd~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~  163 (357)
T 3i2n_A           86 GDFGGNLHIWNLE--APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN  163 (357)
T ss_dssp             EETTSCEEEECTT--SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSC
T ss_pred             ecCCCeEEEEeCC--CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCC
Confidence            3344444445443  334 7788999999999995      57889999999999999999999886 7888876665  


Q ss_pred             --CeEEEE----EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEE
Q psy11015        224 --SVNSVR----FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA  297 (360)
Q Consensus       224 --~v~~i~----~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~  297 (360)
                        .|.+++    |+|++.++++++.|+.|++||++++.                             ......|...|.+
T Consensus       164 ~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----------------------------~~~~~~~~~~v~~  214 (357)
T 3i2n_A          164 KRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-----------------------------LRWETNIKNGVCS  214 (357)
T ss_dssp             CCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE-----------------------------EEEEEECSSCEEE
T ss_pred             CCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc-----------------------------eeeecCCCCceEE
Confidence              799998    67899999999999999999998762                             2334568889999


Q ss_pred             EEEcC---CCCEEEEEECCCcEEEEECCCCeEEEEEe-----cCCCceEEEEEcCCCC-EEEccc-ccch
Q psy11015        298 ADWLS---DGEQVITASWDRVANLFDVETGTILQSLT-----EPGEAIRAAAGRTGGP-IRASPL-LLAI  357 (360)
Q Consensus       298 i~~sp---~g~~l~tgs~dg~i~iwd~~~~~~~~~l~-----~h~~~v~~~~~~~~g~-~las~~-~~~i  357 (360)
                      ++|+|   ++.++++|+.||.|++||++++..+..+.     +|...|++++|+|++. +++++. ++.|
T Consensus       215 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i  284 (357)
T 3i2n_A          215 LEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGL  284 (357)
T ss_dssp             EEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred             EEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcE
Confidence            99999   99999999999999999998776554443     8999999999999998 677665 4444

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.88  E-value=1.7e-21  Score=179.97  Aligned_cols=159  Identities=17%  Similarity=0.176  Sum_probs=134.8

Q ss_pred             eeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEe-------------CCCcCeEEEEEee-CC
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYS-------------GHSGSVNSVRFLP-NK  234 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-------------~h~~~v~~i~~~p-~~  234 (360)
                      ......+.+|.+.|++++|+| ++++|++|+.||.|++||+.++.....+.             +|.+.|.+++|+| ++
T Consensus        33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  112 (408)
T 4a11_B           33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT  112 (408)
T ss_dssp             CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred             CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence            345567789999999999999 99999999999999999999875544443             5999999999999 77


Q ss_pred             CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC---CCEEEEEE
Q psy11015        235 DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---GEQVITAS  311 (360)
Q Consensus       235 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~---g~~l~tgs  311 (360)
                      .+|++++.|+.|++||+.++..                            ...+ .+...+.+++|+|.   +.++++|+
T Consensus       113 ~~l~s~~~d~~i~iwd~~~~~~----------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  163 (408)
T 4a11_B          113 GMFTSSSFDKTLKVWDTNTLQT----------------------------ADVF-NFEETVYSHHMSPVSTKHCLVAVGT  163 (408)
T ss_dssp             TCEEEEETTSEEEEEETTTTEE----------------------------EEEE-ECSSCEEEEEECSSCSSCCEEEEEE
T ss_pred             cEEEEEeCCCeEEEeeCCCCcc----------------------------ceec-cCCCceeeeEeecCCCCCcEEEEEc
Confidence            8999999999999999987632                            2333 36778999999984   45999999


Q ss_pred             CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEccc-ccch
Q psy11015        312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAI  357 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~i  357 (360)
                      .||.|++||+++++.+..+..|...|++++|+|++. +++++. ++.|
T Consensus       164 ~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i  211 (408)
T 4a11_B          164 RGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRV  211 (408)
T ss_dssp             SSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred             CCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcE
Confidence            999999999999999999999999999999999998 465554 5544

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.88  E-value=1.7e-20  Score=173.16  Aligned_cols=187  Identities=18%  Similarity=0.262  Sum_probs=144.8

Q ss_pred             CeEEEeeecCccceeeeeeeecCCCCEEEEEECCCC---CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQ---PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~---~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      +..+..|...  ++..+..+. |...+.++.|+|.+   .++++|+.||.|++||+.++.++..+.+|.+.|.+++|+|+
T Consensus       121 d~~i~iwd~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~  197 (408)
T 4a11_B          121 DKTLKVWDTN--TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPR  197 (408)
T ss_dssp             TSEEEEEETT--TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSS
T ss_pred             CCeEEEeeCC--CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCC
Confidence            3444444433  445555554 78889999999854   49999999999999999999999999999999999999999


Q ss_pred             CC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015        234 KD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  312 (360)
Q Consensus       234 ~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~  312 (360)
                      +. ++++|+.|+.|++||++++............            ...........+|...|.+++|+|+|++|++|+.
T Consensus       198 ~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  265 (408)
T 4a11_B          198 YDYILATASADSRVKLWDVRRASGCLITLDQHNG------------KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT  265 (408)
T ss_dssp             CTTEEEEEETTSCEEEEETTCSSCCSEECCTTTT------------CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred             CCcEEEEEcCCCcEEEEECCCCCccccccccccc------------ccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence            98 5899999999999999876432221111000            0011123334578999999999999999999999


Q ss_pred             CCcEEEEECCCC-----------------------------------------------eEEEEEecCCCceEEEEEcCC
Q psy11015        313 DRVANLFDVETG-----------------------------------------------TILQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       313 dg~i~iwd~~~~-----------------------------------------------~~~~~l~~h~~~v~~~~~~~~  345 (360)
                      ||.|++||+.++                                               +.+..+.+|...|++++|+|+
T Consensus       266 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~  345 (408)
T 4a11_B          266 DNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN  345 (408)
T ss_dssp             TSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETT
T ss_pred             CCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCC
Confidence            999999998653                                               456777889999999999999


Q ss_pred             CCEEEccc-ccchh
Q psy11015        346 GPIRASPL-LLAIR  358 (360)
Q Consensus       346 g~~las~~-~~~ir  358 (360)
                      |.++++++ |+.|+
T Consensus       346 ~~~l~s~~~dg~i~  359 (408)
T 4a11_B          346 FQELYSGSRDCNIL  359 (408)
T ss_dssp             TTEEEEEETTSCEE
T ss_pred             CCEEEEECCCCeEE
Confidence            99888876 54443

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.87  E-value=2.3e-21  Score=197.56  Aligned_cols=183  Identities=10%  Similarity=0.019  Sum_probs=144.1

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      .+..+..+.+|...  .......+ .|...|++++|+| +.+|++++.|++|++||+.+++++..+. |.+.|++++|+|
T Consensus        34 sgs~Dg~I~lw~~~--~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp  108 (902)
T 2oaj_A           34 IATVTGEVHIYGQQ--QVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDA  108 (902)
T ss_dssp             EEETTSEEEEECST--TCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCT
T ss_pred             EEeCCCEEEEEeCC--CcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECC
Confidence            34445556666543  33443333 5889999999999 7799999999999999999999999987 778999999999


Q ss_pred             CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-CCEEEEEE
Q psy11015        233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITAS  311 (360)
Q Consensus       233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-g~~l~tgs  311 (360)
                      +++++++|+.||+|++||+.++........                 ..+.....+.+|.+.|.+++|+|+ +..+++|+
T Consensus       109 ~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~-----------------~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~  171 (902)
T 2oaj_A          109 SLDWMLIGLQNGSMIVYDIDRDQLSSFKLD-----------------NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY  171 (902)
T ss_dssp             TCSEEEEEETTSCEEEEETTTTEEEEEEEC-----------------CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC
T ss_pred             CCCEEEEEcCCCcEEEEECCCCccccceec-----------------cccccccccccCCCCeEEEEEccCCCCEEEEEe
Confidence            999999999999999999987743210000                 000000234679999999999996 57899999


Q ss_pred             CCCcEEEEECCCCeEEEEEecC------------------CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        312 WDRVANLFDVETGTILQSLTEP------------------GEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h------------------~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .||.| +||+++++++..+..|                  ...|++++|+|+|.++||++ |+.||
T Consensus       172 ~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~  236 (902)
T 2oaj_A          172 EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLV  236 (902)
T ss_dssp             SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEE
T ss_pred             CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEE
Confidence            99999 9999999999888766                  46799999999999998877 44443

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.87  E-value=1.1e-20  Score=178.34  Aligned_cols=153  Identities=20%  Similarity=0.219  Sum_probs=137.8

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV  252 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~  252 (360)
                      +..+.+|...|.++.  ++++.+++|+.||.|++||+.+++++..+.+|...|.+++|+|+++++++|+.|++|++||+.
T Consensus       263 ~~~~~~~~~~v~~~~--~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~  340 (464)
T 3v7d_B          263 VGVLRGHMASVRTVS--GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE  340 (464)
T ss_dssp             EEEECCCSSCEEEEE--EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred             EEEccCccceEEEEc--CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence            667889999999884  557899999999999999999999999999999999999999999999999999999999998


Q ss_pred             cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                      ++                            .++..+.+|...|.+++|+  +.++++|+.||.|++||+.++....... 
T Consensus       341 ~~----------------------------~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-  389 (464)
T 3v7d_B          341 NG----------------------------ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-  389 (464)
T ss_dssp             TT----------------------------EEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred             CC----------------------------cEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-
Confidence            76                            3567788999999999996  6899999999999999999988766664 


Q ss_pred             CCCceEEEEEcCCCCEEEcccccchh
Q psy11015        333 PGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      |...+..++|+|++.+++++.++.|+
T Consensus       390 ~~~~~~~~~~~~~~~~l~~~~dg~i~  415 (464)
T 3v7d_B          390 HTNLSAITTFYVSDNILVSGSENQFN  415 (464)
T ss_dssp             CTTCCCEEEEEECSSEEEEEETTEEE
T ss_pred             CCCCccEEEEEeCCCEEEEecCCeEE
Confidence            66778889999999999999987764

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.87  E-value=3.1e-21  Score=188.00  Aligned_cols=168  Identities=15%  Similarity=0.132  Sum_probs=147.5

Q ss_pred             eEEEeeecCccce----eeeeeeecCCCC-EEEEEECC--CCCEEEEEeCCCcEEEEECCCC--------eEEEEEeCCC
Q psy11015        158 KIVSSFKTSLLSC----YKIRSFSGHRDG-VWDVAVRP--GQPVLGSASADRTVRLWSTQTG--------KCVLQYSGHS  222 (360)
Q Consensus       158 ~~~~~~~~~~~~~----~~~~~l~~h~~~-V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~--------~~~~~~~~h~  222 (360)
                      ..+..|...  ++    .....+.+|.+. |++++|+|  ++++|++|+.||+|++||+.++        ..+..+.+|.
T Consensus        39 ~~v~v~~~~--~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~  116 (615)
T 1pgu_A           39 KSAFVRCLD--DGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA  116 (615)
T ss_dssp             TEEEEEECC--SSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS
T ss_pred             CeEEEEECC--CCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhccc
Confidence            345555544  45    788899999999 99999999  9999999999999999999754        7788889999


Q ss_pred             cCeEEEEEeeCCCEEEEEeCC----CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEE
Q psy11015        223 GSVNSVRFLPNKDLVLSASGD----KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA  298 (360)
Q Consensus       223 ~~v~~i~~~p~~~~l~s~s~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i  298 (360)
                      +.|.+++|+|+++++++++.+    +.|.+||..                              ..+..+.+|...|.++
T Consensus       117 ~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~------------------------------~~~~~~~~~~~~v~~~  166 (615)
T 1pgu_A          117 GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG------------------------------NSLGEVSGHSQRINAC  166 (615)
T ss_dssp             SCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC------------------------------CEEEECCSCSSCEEEE
T ss_pred             ccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC------------------------------CcceeeecCCccEEEE
Confidence            999999999999999999988    688888732                              2466778999999999


Q ss_pred             EEcCCCC-EEEEEECCCcEEEEECCCCeEEEEEecCCC---ceEEEEEcCC-CCEEEccc-ccch
Q psy11015        299 DWLSDGE-QVITASWDRVANLFDVETGTILQSLTEPGE---AIRAAAGRTG-GPIRASPL-LLAI  357 (360)
Q Consensus       299 ~~sp~g~-~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~---~v~~~~~~~~-g~~las~~-~~~i  357 (360)
                      +|+|+++ .+++|+.||.|++||+.+++.+..+.+|..   .|++++|+|+ |.+++++. ++.|
T Consensus       167 ~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i  231 (615)
T 1pgu_A          167 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI  231 (615)
T ss_dssp             EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred             EECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence            9999998 899999999999999999999999999999   9999999999 99888766 4444

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.87  E-value=1e-20  Score=184.36  Aligned_cols=174  Identities=20%  Similarity=0.161  Sum_probs=150.9

Q ss_pred             ecCCeEEEeeecCcc------ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEEEeCCCc
Q psy11015        154 VQTSKIVSSFKTSLL------SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSG  223 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~------~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D----g~v~iwd~~~~~~~~~~~~h~~  223 (360)
                      +..+..+..|.....      ....+..+.+|.+.|.+++|+|++.+|++++.|    +.|++||  .++.+..+.+|..
T Consensus        84 ~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~  161 (615)
T 1pgu_A           84 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQ  161 (615)
T ss_dssp             EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSS
T ss_pred             ecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCc
Confidence            444555566665444      567888999999999999999999999999988    6888888  6778899999999


Q ss_pred             CeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC---cEEEEE
Q psy11015        224 SVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN---VVIAAD  299 (360)
Q Consensus       224 ~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~i~  299 (360)
                      .|.+++|+|+++ .+++++.|+.|++||+.++                            ..+..+.+|..   .|.+++
T Consensus       162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~----------------------------~~~~~~~~~~~~~~~v~~~~  213 (615)
T 1pgu_A          162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPF----------------------------KFSASDRTHHKQGSFVRDVE  213 (615)
T ss_dssp             CEEEEEECSSSSCEEEEEETTTEEEEEETTTB----------------------------EEEEEECSSSCTTCCEEEEE
T ss_pred             cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc----------------------------ceeeeecccCCCCceEEEEE
Confidence            999999999998 8999999999999998765                            34567778988   999999


Q ss_pred             EcCC-CCEEEEEECCCcEEEEECCCCeEEEEE-e---cCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        300 WLSD-GEQVITASWDRVANLFDVETGTILQSL-T---EPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       300 ~sp~-g~~l~tgs~dg~i~iwd~~~~~~~~~l-~---~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |+|+ +++|++|+.||.|++||+.+++.+..+ .   .|...|++++|+ ++.+++++. ++.||
T Consensus       214 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~  277 (615)
T 1pgu_A          214 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIR  277 (615)
T ss_dssp             ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEE
T ss_pred             ECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEE
Confidence            9999 999999999999999999999999999 6   899999999999 998888776 44443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.87  E-value=2.5e-20  Score=174.90  Aligned_cols=197  Identities=20%  Similarity=0.263  Sum_probs=148.1

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~  231 (360)
                      +.+..+..+..|..  .++..+..+.+|.+.|++++|  ++..|++|+.||+|++||+.+++++..+.+|.+.|.+++|+
T Consensus       147 ~~g~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~  222 (435)
T 1p22_A          147 VSGLRDNTIKIWDK--NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN  222 (435)
T ss_dssp             EEEESSSCEEEEES--SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC
T ss_pred             EEEeCCCeEEEEeC--CCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc
Confidence            34445555555554  567788999999999999999  57799999999999999999999999999999999999996


Q ss_pred             eCCCEEEEEeCCCcEEEEEcccCeeE---eeeCCCCCCCCCC-------CCCCCCC-----ccccccceeEeeCCCCcEE
Q psy11015        232 PNKDLVLSASGDKSVHIWQAVINWEC---LVSNNDNDSDLDE-------SKEPDES-----SITLRTPVKELLGHSNVVI  296 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~~~~~h~~~v~  296 (360)
                        +.++++|+.|++|++||+.++...   .....+.......       .....+.     .......+..+.+|...|.
T Consensus       223 --~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~  300 (435)
T 1p22_A          223 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA  300 (435)
T ss_dssp             --TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             --CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEE
Confidence              459999999999999999876543   1111111111000       0001111     1233456778888888888


Q ss_pred             EEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        297 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      +++|  +++++++|+.||.|++||+++++++..+.+|...|++++|  ++.++++++ |+.||
T Consensus       301 ~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~  359 (435)
T 1p22_A          301 CLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIK  359 (435)
T ss_dssp             EEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred             EEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEE
Confidence            8887  8888888888888999988888888888888888888888  666666655 55554

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.87  E-value=4.8e-21  Score=175.82  Aligned_cols=124  Identities=15%  Similarity=0.091  Sum_probs=109.1

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCC----cEEEEECCCCeE----EEEEeCCCcCeEEEEEeeCCCEEEEEeCC
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADR----TVRLWSTQTGKC----VLQYSGHSGSVNSVRFLPNKDLVLSASGD  243 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg----~v~iwd~~~~~~----~~~~~~h~~~v~~i~~~p~~~~l~s~s~d  243 (360)
                      ......+|...|.+++|+|++..+++++.|+    ++++|++..+..    ...+.+|...|++++|+|+|++|++|+.|
T Consensus       211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D  290 (365)
T 4h5i_A          211 ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND  290 (365)
T ss_dssp             EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT
T ss_pred             eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC
Confidence            3345678999999999999999999999987    688899877643    45678899999999999999999999999


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeE-eeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      ++|+|||+.++                            .++.. +.+|...|++++|+|+|++||+||.|++|+|||+.
T Consensus       291 ~~V~iwd~~~~----------------------------~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip  342 (365)
T 4h5i_A          291 NSIALVKLKDL----------------------------SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP  342 (365)
T ss_dssp             SCEEEEETTTT----------------------------EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred             CEEEEEECCCC----------------------------cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence            99999999876                            33444 46899999999999999999999999999999986


Q ss_pred             C
Q psy11015        323 T  323 (360)
Q Consensus       323 ~  323 (360)
                      .
T Consensus       343 ~  343 (365)
T 4h5i_A          343 L  343 (365)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.87  E-value=4.1e-20  Score=173.79  Aligned_cols=200  Identities=20%  Similarity=0.249  Sum_probs=161.9

Q ss_pred             eeeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEE
Q psy11015        149 TNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV  228 (360)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i  228 (360)
                      ...+.+..+..+..|....  +..+..+.+|.+.|.+++|  ++..+++|+.||.|++||+.+++++..+.+|.+.|.++
T Consensus       210 ~~l~s~s~dg~i~~wd~~~--~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~  285 (445)
T 2ovr_B          210 KRVVSGSRDATLRVWDIET--GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL  285 (445)
T ss_dssp             TEEEEEETTSEEEEEESSS--CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE
T ss_pred             CEEEEEeCCCEEEEEECCC--CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEE
Confidence            3578888888889899764  5678889999999999999  57799999999999999999999999999999999999


Q ss_pred             EEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC-------CCCCCC-----ccccccceeEeeC---CCC
Q psy11015        229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES-------KEPDES-----SITLRTPVKELLG---HSN  293 (360)
Q Consensus       229 ~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~~~~~~---h~~  293 (360)
                      +|  ++.++++|+.|++|++||+.++........+........       ....+.     ......++..+.+   |..
T Consensus       286 ~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~  363 (445)
T 2ovr_B          286 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS  363 (445)
T ss_dssp             EE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS
T ss_pred             EE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC
Confidence            99  788999999999999999999887766544422211110       011111     1223345666665   888


Q ss_pred             cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE-----ecCCCceEEEEEcCCCCEEEcccccc
Q psy11015        294 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-----TEPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       294 ~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l-----~~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      .|.+++|+  ++++++|+.||.|++||+.+++.+..+     .+|.+.|++++|+|+|.++|++...+
T Consensus       364 ~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg  429 (445)
T 2ovr_B          364 AVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG  429 (445)
T ss_dssp             CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred             CEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence            99999995  689999999999999999999999888     46888999999999999999887544

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.87  E-value=6e-21  Score=172.43  Aligned_cols=203  Identities=8%  Similarity=-0.049  Sum_probs=149.7

Q ss_pred             eeecCCeEEEeeecCccc-eeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEEC-CCCeEEEEEeC--CCcCeE
Q psy11015        152 LKVQTSKIVSSFKTSLLS-CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWST-QTGKCVLQYSG--HSGSVN  226 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~-~~~~~~~~~~~--h~~~v~  226 (360)
                      +.+.....+..|...... ......+.+|.+.|.+++|+|++. +|++|+.||.|++||+ .++.. ..+.+  |...|.
T Consensus        27 ~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~  105 (342)
T 1yfq_A           27 LITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGIC  105 (342)
T ss_dssp             EEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEE
T ss_pred             EEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceE
Confidence            344455566666655433 234566679999999999999999 9999999999999999 77754 77888  999999


Q ss_pred             EEEEeeCCCEEEEEeCCCcEEEEEccc---------CeeEeeeCCCCCCCCC-------CCCCCCCCccc-----c---c
Q psy11015        227 SVRFLPNKDLVLSASGDKSVHIWQAVI---------NWECLVSNNDNDSDLD-------ESKEPDESSIT-----L---R  282 (360)
Q Consensus       227 ~i~~~p~~~~l~s~s~d~~i~vwd~~~---------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-----~---~  282 (360)
                      +++|+| +.++++++.|+.|++||+.+         +....... +......       ...........     .   .
T Consensus       106 ~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  183 (342)
T 1yfq_A          106 RICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD  183 (342)
T ss_dssp             EEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTC
T ss_pred             EEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccc
Confidence            999999 99999999999999999986         43222221 1100000       00000111111     1   0


Q ss_pred             cceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCC------eEEEEEecCCC---------ceEEEEEcCCC
Q psy11015        283 TPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETG------TILQSLTEPGE---------AIRAAAGRTGG  346 (360)
Q Consensus       283 ~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~------~~~~~l~~h~~---------~v~~~~~~~~g  346 (360)
                      ........|...|.+++|+| +++++++|+.||.+++|++..+      +....+..|..         .|++++|+|+|
T Consensus       184 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  263 (342)
T 1yfq_A          184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH  263 (342)
T ss_dssp             CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT
T ss_pred             cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC
Confidence            12224456788999999999 9999999999999999999887      77788888865         99999999999


Q ss_pred             CEEEccc-ccch
Q psy11015        347 PIRASPL-LLAI  357 (360)
Q Consensus       347 ~~las~~-~~~i  357 (360)
                      .+++++. ++.|
T Consensus       264 ~~l~~~~~dg~i  275 (342)
T 1yfq_A          264 KFLYTAGSDGII  275 (342)
T ss_dssp             CCEEEEETTSCE
T ss_pred             CEEEEecCCceE
Confidence            9888776 4444

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.87  E-value=3.2e-20  Score=174.55  Aligned_cols=195  Identities=23%  Similarity=0.375  Sum_probs=144.9

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~  233 (360)
                      +..++.+..|..  .++..+..+.+|.+.|++++|+  ++.+++|+.||+|++||+.+++++..+.+|.+.|.++.|+  
T Consensus       135 g~~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--  208 (445)
T 2ovr_B          135 GSDDNTLKVWSA--VTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--  208 (445)
T ss_dssp             EETTSCEEEEET--TTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--
T ss_pred             EECCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--
Confidence            444444445544  4677889999999999999998  5599999999999999999999999999999999999995  


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC-------CCCCCC-----ccccccceeEeeCCCCcEEEEEEc
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES-------KEPDES-----SITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      +..+++|+.|++|++||+.++........+........       ....+.     ......++..+.+|...|.+++| 
T Consensus       209 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-  287 (445)
T 2ovr_B          209 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-  287 (445)
T ss_dssp             TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-
T ss_pred             CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-
Confidence            56899999999999999998765554433322111110       001111     12334566777788888888887 


Q ss_pred             CCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        302 SDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       302 p~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                       ++.++++|+.||.|++||+++++.+..+.+|...+.++.+  ++.++++++ ++.|+
T Consensus       288 -~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~  342 (445)
T 2ovr_B          288 -DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK  342 (445)
T ss_dssp             -CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEE
T ss_pred             -CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEE
Confidence             8888888888888888888888888888888887776655  666666555 45443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.86  E-value=2.2e-20  Score=175.27  Aligned_cols=151  Identities=24%  Similarity=0.381  Sum_probs=133.4

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      ....+.+|.+.|.+++|  +++.+++|+.||+|++||+.+++++..+.+|...|.++.|  ++.++++|+.|++|++||+
T Consensus       248 ~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~  323 (435)
T 1p22_A          248 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI  323 (435)
T ss_dssp             EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred             eeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence            34778899999999999  5779999999999999999999999999999999999999  4679999999999999999


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe------
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT------  325 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~------  325 (360)
                      .++                            .++..+.+|...|.+++|  ++.+|++|+.||.|++||+.++.      
T Consensus       324 ~~~----------------------------~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~  373 (435)
T 1p22_A          324 ECG----------------------------ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPA  373 (435)
T ss_dssp             TTC----------------------------CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCT
T ss_pred             CCC----------------------------CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccc
Confidence            876                            356778899999999999  78999999999999999997766      


Q ss_pred             ---EEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        326 ---ILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       326 ---~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                         ++..+.+|.+.|++++|  ++.++++++ |+.|+
T Consensus       374 ~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~  408 (435)
T 1p22_A          374 GTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL  408 (435)
T ss_dssp             TTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEE
T ss_pred             cchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEE
Confidence               88999999999999999  455555555 66654

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.86  E-value=3.3e-21  Score=180.96  Aligned_cols=147  Identities=12%  Similarity=0.073  Sum_probs=123.8

Q ss_pred             cCCCCEEEEEECCCCCEEE----EEeCCCcEEEEECCCC--------e---EEEEEeCCCcCeEEEEEeeC-CCEEEEEe
Q psy11015        178 GHRDGVWDVAVRPGQPVLG----SASADRTVRLWSTQTG--------K---CVLQYSGHSGSVNSVRFLPN-KDLVLSAS  241 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~----sgs~Dg~v~iwd~~~~--------~---~~~~~~~h~~~v~~i~~~p~-~~~l~s~s  241 (360)
                      .|.+.|++++|+|++++|+    +|+.|++|+|||+.++        +   .+..+.+|.+.|.+++|+|+ +.+|++++
T Consensus        90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s  169 (434)
T 2oit_A           90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL  169 (434)
T ss_dssp             CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred             cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence            4677899999999999999    8899999999998654        2   24566789999999999998 78999999


Q ss_pred             CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        242 GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      .||+|++||++++.                            ......+|...|.+++|+|+|++|++|+.||.|++||+
T Consensus       170 ~Dg~v~iwD~~~~~----------------------------~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~  221 (434)
T 2oit_A          170 ADGSIAVLQVTETV----------------------------KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLP  221 (434)
T ss_dssp             TTSCEEEEEESSSE----------------------------EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             CCCeEEEEEcCCCc----------------------------ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence            99999999998762                            23345578889999999999999999999999999999


Q ss_pred             CCCeEEEEEecCC-------CceEEEEEcCCCCEEEccc
Q psy11015        322 ETGTILQSLTEPG-------EAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       322 ~~~~~~~~l~~h~-------~~v~~~~~~~~g~~las~~  353 (360)
                      + ++....+..|.       ..|.+++|++++.++++..
T Consensus       222 ~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~  259 (434)
T 2oit_A          222 T-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA  259 (434)
T ss_dssp             T-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred             C-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEc
Confidence            8 66666665442       3899999999998886443

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.86  E-value=3.2e-20  Score=169.67  Aligned_cols=131  Identities=15%  Similarity=0.165  Sum_probs=104.5

Q ss_pred             EeCCCcEEEEECCCCe----------------EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc-EEEEEcccCeeEeee
Q psy11015        198 ASADRTVRLWSTQTGK----------------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-VHIWQAVINWECLVS  260 (360)
Q Consensus       198 gs~Dg~v~iwd~~~~~----------------~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~-i~vwd~~~~~~~~~~  260 (360)
                      |+.||.|++||+.++.                ++..+.+|.+.|.+++|+|+|.+|++|+.|++ |++||+.++      
T Consensus       155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~------  228 (355)
T 3vu4_A          155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG------  228 (355)
T ss_dssp             SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC------
T ss_pred             CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC------
Confidence            5789999999998765                27889999999999999999999999999999 999999876      


Q ss_pred             CCCCCCCCCCCCCCCCCccccccceeEee-C-CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE--EEEE------
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPVKELL-G-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI--LQSL------  330 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~--~~~l------  330 (360)
                                            .++..+. + |...|.+++|+|+|++|++|+.||+|++||+..+..  ...+      
T Consensus       229 ----------------------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~  286 (355)
T 3vu4_A          229 ----------------------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINM  286 (355)
T ss_dssp             ----------------------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEEC
T ss_pred             ----------------------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeec
Confidence                                  3456676 5 999999999999999999999999999999976531  1111      


Q ss_pred             --------------e-cCCCceEEEEEcCCCCEEEccc-ccc
Q psy11015        331 --------------T-EPGEAIRAAAGRTGGPIRASPL-LLA  356 (360)
Q Consensus       331 --------------~-~h~~~v~~~~~~~~g~~las~~-~~~  356 (360)
                                    . .+..+...++|+++|..++++. ++.
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~  328 (355)
T 3vu4_A          287 KYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRM  328 (355)
T ss_dssp             CCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTE
T ss_pred             cccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCe
Confidence                          0 1122346789999998777654 443

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.85  E-value=3.9e-21  Score=178.16  Aligned_cols=152  Identities=17%  Similarity=0.125  Sum_probs=114.9

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-----EEeCCCcCeEEEEEee--------CCCEEEEEeCCC
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-----QYSGHSGSVNSVRFLP--------NKDLVLSASGDK  244 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-----~~~~h~~~v~~i~~~p--------~~~~l~s~s~d~  244 (360)
                      +|.+.+....+.+++.+|++|+.|++|++||+.++.+..     .+.||.+.|++++|+|        ++++|++||.|+
T Consensus        87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~  166 (393)
T 4gq1_A           87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC  166 (393)
T ss_dssp             ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred             ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence            344445555566677789999999999999999886433     3679999999999998        788999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEECCCcEEEEECCC
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVET  323 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~dg~i~iwd~~~  323 (360)
                      +|+|||+.++                            .+...+.+|...|.+++|+|++. +|++|+.||+|++||+++
T Consensus       167 tv~~Wd~~~~----------------------------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t  218 (393)
T 4gq1_A          167 TLIIWRLTDE----------------------------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL  218 (393)
T ss_dssp             EEEEEEEETT----------------------------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred             eEEEEECCCC----------------------------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence            9999998765                            24555667889999999999875 799999999999999998


Q ss_pred             CeEEEEE-------------------------ecCCCceEEEEEc-CCCCEEEccc-ccch
Q psy11015        324 GTILQSL-------------------------TEPGEAIRAAAGR-TGGPIRASPL-LLAI  357 (360)
Q Consensus       324 ~~~~~~l-------------------------~~h~~~v~~~~~~-~~g~~las~~-~~~i  357 (360)
                      ++.....                         .+|...+.+++|+ |+|..++++. +..+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i  279 (393)
T 4gq1_A          219 NLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAW  279 (393)
T ss_dssp             CC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEE
T ss_pred             CcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCE
Confidence            7654332                         3567788899986 7888887765 4433

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.83  E-value=5e-19  Score=165.27  Aligned_cols=143  Identities=24%  Similarity=0.384  Sum_probs=111.7

Q ss_pred             eeeeeeecCCCCEEEEEECCCCC-EEEE--EeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe--CCCc
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQP-VLGS--ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS--GDKS  245 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~-~l~s--gs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s--~d~~  245 (360)
                      ..+....+|.+.|.+++|+|.+. ++++  |+.|++|++||+.++.++..+..| ..+.++.|+|++..+++++  .|++
T Consensus       267 ~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~  345 (420)
T 4gga_A          267 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQ  345 (420)
T ss_dssp             CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCC
T ss_pred             eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCE
Confidence            34567788999999999999765 5555  458999999999999999999854 6789999999999888765  6899


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      |+|||+.++                            .++..+.+|.+.|++++|+|+|.+|+||+.||+|+|||+....
T Consensus       346 I~iwd~~~~----------------------------~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~  397 (420)
T 4gga_A          346 LVIWKYPTM----------------------------AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  397 (420)
T ss_dssp             EEEEETTTC----------------------------CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred             EEEEECCCC----------------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            999999876                            4677889999999999999999999999999999999998776


Q ss_pred             EEEEEecCCCceEEEEE
Q psy11015        326 ILQSLTEPGEAIRAAAG  342 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~  342 (360)
                      +......+...+....+
T Consensus       398 ~~~~~~~~~~~~~~~s~  414 (420)
T 4gga_A          398 PARRREREKASAAKSSL  414 (420)
T ss_dssp             CC---------------
T ss_pred             ccchhhhccCCcccccc
Confidence            66666555554444444

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.82  E-value=1.2e-18  Score=155.47  Aligned_cols=143  Identities=18%  Similarity=0.256  Sum_probs=122.3

Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      +++|+|++++ +|++| .|++|+|||+.+++++..+.  +|...|.+++|+|+++++++|+.|++|++||+.++      
T Consensus        28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~------   99 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ------   99 (318)
T ss_dssp             CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT------
T ss_pred             ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc------
Confidence            4679999876 66665 59999999999999888775  67778999999999999999999999999999877      


Q ss_pred             CCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEEEecCCCceEE
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLTEPGEAIRA  339 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~l~~h~~~v~~  339 (360)
                                            ..+..+.+|...+.++.+  ++..+++|+.++.+++|+..++ ..+..+.+|...+..
T Consensus       100 ----------------------~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (318)
T 4ggc_A          100 ----------------------KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG  155 (318)
T ss_dssp             ----------------------EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred             ----------------------eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEE
Confidence                                  346678899988877665  6789999999999999998865 566788899999999


Q ss_pred             EEEcCCCCEEEcccc-cch
Q psy11015        340 AAGRTGGPIRASPLL-LAI  357 (360)
Q Consensus       340 ~~~~~~g~~las~~~-~~i  357 (360)
                      ++|+++|.+++++.. +.|
T Consensus       156 ~~~~~~~~~l~s~~~d~~i  174 (318)
T 4ggc_A          156 LRWAPDGRHLASGGNDNLV  174 (318)
T ss_dssp             EEECTTSSEEEEEETTSCE
T ss_pred             EEEcCCCCEEEEEecCcce
Confidence            999999998888764 444

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.81  E-value=1.5e-18  Score=154.52  Aligned_cols=147  Identities=12%  Similarity=0.032  Sum_probs=109.4

Q ss_pred             CEEEEEECCC----CCEEEEEeC--------------------CCcEEEEEC-CCCeEEEEEeCCCcCeEEEEEee---C
Q psy11015        182 GVWDVAVRPG----QPVLGSASA--------------------DRTVRLWST-QTGKCVLQYSGHSGSVNSVRFLP---N  233 (360)
Q Consensus       182 ~V~~l~~~~~----~~~l~sgs~--------------------Dg~v~iwd~-~~~~~~~~~~~h~~~v~~i~~~p---~  233 (360)
                      .|++++++|+    ++.+++++.                    |+.|++|++ .+|+.+..+.+|...++.++|+|   +
T Consensus       113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~  192 (356)
T 2w18_A          113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM  192 (356)
T ss_dssp             EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred             ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence            5667777778    777777653                    889999999 45888888889999999999999   7


Q ss_pred             CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---CcEEEEEEcCCCCEE---
Q psy11015        234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWLSDGEQV---  307 (360)
Q Consensus       234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~i~~sp~g~~l---  307 (360)
                      +.+|++|+.|++|+|||+.++.                            .+.++.+|.   ..+.+++|+|+|.++   
T Consensus       193 ~~~LaSgS~D~TIkIWDl~TGk----------------------------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~  244 (356)
T 2w18_A          193 QEALLGTTIMNNIVIWNLKTGQ----------------------------LLKKMHIDDSYQASVCHKAYSEMGLLFIVL  244 (356)
T ss_dssp             TTEEEEEETTSEEEEEETTTCC----------------------------EEEEEECCC---CCCEEEEEEETTEEEEEE
T ss_pred             CceEEEecCCCcEEEEECCCCc----------------------------EEEEEcCCCcceeeeEEEEECCCCCEEEEe
Confidence            7899999999999999999873                            456666543   367788999999876   


Q ss_pred             ---------EEEECCCcEEEEECCCCeEEEEE-----ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        308 ---------ITASWDRVANLFDVETGTILQSL-----TEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       308 ---------~tgs~dg~i~iwd~~~~~~~~~l-----~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                               ++|+.|++|++||..+++.+..+     .+|...+.+..++  +.++|+++ |++||
T Consensus       245 s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIk  308 (356)
T 2w18_A          245 SHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIA  308 (356)
T ss_dssp             C------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEE
T ss_pred             ccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEE
Confidence                     56889999999999999988776     3565555444443  67777765 55554

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.79  E-value=1.4e-17  Score=155.43  Aligned_cols=162  Identities=12%  Similarity=0.110  Sum_probs=131.9

Q ss_pred             eEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCC---cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC
Q psy11015        158 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK  234 (360)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg---~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~  234 (360)
                      ..+..|...   +...+.+.+|.+.|.+++|+|+|+.|++++.|+   .|++||+.++++. .+..|.+.+.+++|+|+|
T Consensus       159 ~~i~i~d~~---g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg  234 (415)
T 2hqs_A          159 YELRVSDYD---GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDG  234 (415)
T ss_dssp             EEEEEEETT---SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTS
T ss_pred             ceEEEEcCC---CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCC
Confidence            444455543   345678889999999999999999999999885   9999999998875 466788899999999999


Q ss_pred             CEEE-EEeCCCc--EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        235 DLVL-SASGDKS--VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       235 ~~l~-s~s~d~~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                      +.|+ +++.|+.  |.+||+.++                             ....+..|...+.+++|+|+|++|++++
T Consensus       235 ~~la~~~~~~g~~~i~~~d~~~~-----------------------------~~~~l~~~~~~~~~~~~spdg~~l~~~s  285 (415)
T 2hqs_A          235 SKLAFALSKTGSLNLYVMDLASG-----------------------------QIRQVTDGRSNNTEPTWFPDSQNLAFTS  285 (415)
T ss_dssp             SEEEEEECTTSSCEEEEEETTTC-----------------------------CEEECCCCSSCEEEEEECTTSSEEEEEE
T ss_pred             CEEEEEEecCCCceEEEEECCCC-----------------------------CEEeCcCCCCcccceEECCCCCEEEEEE
Confidence            9777 6666665  999998766                             2355667888999999999999999888


Q ss_pred             C-CC--cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        312 W-DR--VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       312 ~-dg--~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      . +|  .|.+||+.+++. ..+..+...+.+++|+|+|++++++.
T Consensus       286 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~  329 (415)
T 2hqs_A          286 DQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVS  329 (415)
T ss_dssp             CTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEE
T ss_pred             CCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEE
Confidence            6 45  677889988763 45566778899999999999888665

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.79  E-value=1.9e-17  Score=152.56  Aligned_cols=166  Identities=12%  Similarity=0.145  Sum_probs=132.6

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      +..+..+..|..  .+++.+..+.+|.. +.+++|+|++..+ ++++.|++|++||+.+++.+..+..+. .+.+++|+|
T Consensus         8 ~~~d~~v~v~d~--~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~sp   83 (391)
T 1l0q_A            8 NSESDNISVIDV--TSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSP   83 (391)
T ss_dssp             ETTTTEEEEEET--TTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECT
T ss_pred             cCCCCEEEEEEC--CCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECC
Confidence            444455555554  45677778887754 8999999999966 778899999999999999999988655 899999999


Q ss_pred             CCCEEEE-EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEE
Q psy11015        233 NKDLVLS-ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITA  310 (360)
Q Consensus       233 ~~~~l~s-~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tg  310 (360)
                      ++++++. ++.|+.|++||+.++..                            +..+.. ...+.+++|+|+|+++ +++
T Consensus        84 dg~~l~~~~~~~~~v~v~d~~~~~~----------------------------~~~~~~-~~~~~~~~~s~dg~~l~~~~  134 (391)
T 1l0q_A           84 DGKQVYVTNMASSTLSVIDTTSNTV----------------------------AGTVKT-GKSPLGLALSPDGKKLYVTN  134 (391)
T ss_dssp             TSSEEEEEETTTTEEEEEETTTTEE----------------------------EEEEEC-SSSEEEEEECTTSSEEEEEE
T ss_pred             CCCEEEEEECCCCEEEEEECCCCeE----------------------------EEEEeC-CCCcceEEECCCCCEEEEEe
Confidence            9997754 55679999999987632                            333433 4568999999999987 688


Q ss_pred             ECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEE-Eccc
Q psy11015        311 SWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIR-ASPL  353 (360)
Q Consensus       311 s~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~l-as~~  353 (360)
                      +.|+.|++||+.+++.+..+..+ ..+.+++|+|+|..+ +++.
T Consensus       135 ~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~  177 (391)
T 1l0q_A          135 NGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANF  177 (391)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEET
T ss_pred             CCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeC
Confidence            88999999999999999888765 457999999999866 4433

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.78  E-value=1.3e-17  Score=155.78  Aligned_cols=153  Identities=12%  Similarity=0.090  Sum_probs=127.7

Q ss_pred             eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCCcEEEEEccc
Q psy11015        175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIWQAVI  253 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~~i~vwd~~~  253 (360)
                      .+.+|.+.|++++|+|++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|+++.++ +++.|+.|++||+.+
T Consensus       164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~  243 (433)
T 3bws_A          164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT  243 (433)
T ss_dssp             HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred             cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence            5568999999999999999999999999999999999999999999999999999999999875 455799999999987


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE--------CCCcEEEEECCCCe
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--------WDRVANLFDVETGT  325 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--------~dg~i~iwd~~~~~  325 (360)
                      +..                            +..+.. ...+.+++|+|+|+++++++        .||.|++||+.+++
T Consensus       244 ~~~----------------------------~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~  294 (433)
T 3bws_A          244 KLE----------------------------IRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK  294 (433)
T ss_dssp             TEE----------------------------EEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred             CcE----------------------------EEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence            632                            333333 34589999999999999888        58899999999998


Q ss_pred             EEEEEecCCCceEEEEEcCCCC-EEEc-ccccch
Q psy11015        326 ILQSLTEPGEAIRAAAGRTGGP-IRAS-PLLLAI  357 (360)
Q Consensus       326 ~~~~l~~h~~~v~~~~~~~~g~-~las-~~~~~i  357 (360)
                      .+..+. |...+.+++|+|+|+ ++++ +.++.|
T Consensus       295 ~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v  327 (433)
T 3bws_A          295 LIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKI  327 (433)
T ss_dssp             EEEEEE-EEECEEEEEECSSTTEEEEEETTTTEE
T ss_pred             EEeecc-CCCCcceEEECCCCCEEEEEecCCCEE
Confidence            877764 556899999999996 4454 344443

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.77  E-value=8.2e-18  Score=157.08  Aligned_cols=155  Identities=12%  Similarity=0.019  Sum_probs=130.6

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-----EEeCCCcCeEEEEEeeCCCEEEEEeCC
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-----QYSGHSGSVNSVRFLPNKDLVLSASGD  243 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-----~~~~h~~~v~~i~~~p~~~~l~s~s~d  243 (360)
                      ....+..+..+. .+.+++|+|++.++++++.|+.|++||+.+++.+.     .+.+|.+.|.+++|+|++.++++++.|
T Consensus       112 ~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d  190 (433)
T 3bws_A          112 THRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA  190 (433)
T ss_dssp             SEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG
T ss_pred             cceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC
Confidence            336666776664 45599999977788888899999999999998877     445788999999999999999999999


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVE  322 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~  322 (360)
                      +.|++||+.++                            ..+..+..|...+.+++|+|++++++++ +.|+.|++||+.
T Consensus       191 ~~v~~~d~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~  242 (433)
T 3bws_A          191 NAVHVFDLKTL----------------------------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK  242 (433)
T ss_dssp             TEEEEEETTTC----------------------------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CEEEEEECCCc----------------------------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence            99999998765                            3455666888999999999999988554 479999999999


Q ss_pred             CCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +++.+..+..+ ..+.+++|+|+|.+++++.
T Consensus       243 ~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~  272 (433)
T 3bws_A          243 TKLEIRKTDKI-GLPRGLLLSKDGKELYIAQ  272 (433)
T ss_dssp             TTEEEEECCCC-SEEEEEEECTTSSEEEEEE
T ss_pred             CCcEEEEecCC-CCceEEEEcCCCCEEEEEE
Confidence            99998888754 4699999999998877765

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.77  E-value=6.8e-17  Score=148.75  Aligned_cols=163  Identities=16%  Similarity=0.120  Sum_probs=130.7

Q ss_pred             CeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC
Q psy11015        157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG-SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  235 (360)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~-sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~  235 (360)
                      +..+..|.  ..+++.+..+..|. .+.+++|+|+++.|+ +++.|+.|++||+.+++.+..+..| ..+.+++|+|+++
T Consensus        53 d~~i~v~d--~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~  128 (391)
T 1l0q_A           53 SNDVSIID--TATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGK  128 (391)
T ss_dssp             GTEEEEEE--TTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSS
T ss_pred             CCeEEEEE--CCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCC
Confidence            33444444  34667777777766 999999999999775 5557799999999999998888854 5789999999999


Q ss_pred             EE-EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEECC
Q psy11015        236 LV-LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWD  313 (360)
Q Consensus       236 ~l-~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs~d  313 (360)
                      .+ ++++.|+.|++||+.++.                            ....+..| ..+.+++|+|+|+++ ++++.|
T Consensus       129 ~l~~~~~~~~~v~~~d~~~~~----------------------------~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~  179 (391)
T 1l0q_A          129 KLYVTNNGDKTVSVINTVTKA----------------------------VINTVSVG-RSPKGIAVTPDGTKVYVANFDS  179 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTE----------------------------EEEEEECC-SSEEEEEECTTSSEEEEEETTT
T ss_pred             EEEEEeCCCCEEEEEECCCCc----------------------------EEEEEecC-CCcceEEECCCCCEEEEEeCCC
Confidence            77 688889999999998763                            23444444 456899999999988 677889


Q ss_pred             CcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        314 RVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       314 g~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +.|++||+.+++.+..+. +...+.+++|+|+|.+++++.
T Consensus       180 ~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~  218 (391)
T 1l0q_A          180 MSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTN  218 (391)
T ss_dssp             TEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEE
T ss_pred             CEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEe
Confidence            999999999999888876 456799999999998777664

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.77  E-value=2.2e-18  Score=161.71  Aligned_cols=159  Identities=11%  Similarity=-0.003  Sum_probs=121.6

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----------e-----EEEEEeCCCcCeEEEEEeeCCCEEE----E
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----------K-----CVLQYSGHSGSVNSVRFLPNKDLVL----S  239 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-----------~-----~~~~~~~h~~~v~~i~~~p~~~~l~----s  239 (360)
                      ...+..+++++++.++++|+.|+ +++|+....           .     ....+ .|.+.|.+++|+|+|++|+    +
T Consensus        36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~s  113 (434)
T 2oit_A           36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMS  113 (434)
T ss_dssp             CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEE
T ss_pred             CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEec
Confidence            34678899999999999999998 888875310           1     11122 3667899999999999999    7


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-CCEEEEEECCCcEEE
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANL  318 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-g~~l~tgs~dg~i~i  318 (360)
                      |+.|++|++||+.++.....                 ...........+.+|...|.+++|+|+ +.+|++|+.||+|++
T Consensus       114 gs~d~~v~iwd~~~~~~~~~-----------------~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i  176 (434)
T 2oit_A          114 SEYGSIIAFFDVRTFSNEAK-----------------QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV  176 (434)
T ss_dssp             TTTEEEEEEEEHHHHHCTTC-----------------SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred             cCCCceEEEEEccccccCCc-----------------CCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence            88999999999875410000                 000000124456679999999999998 889999999999999


Q ss_pred             EECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        319 FDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       319 wd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      ||++++..+....+|...|++++|+|+|.+++++. |+.|
T Consensus       177 wD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v  216 (434)
T 2oit_A          177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTV  216 (434)
T ss_dssp             EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCE
T ss_pred             EEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcE
Confidence            99999988777778899999999999999888776 4444

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.74  E-value=2.6e-16  Score=146.80  Aligned_cols=153  Identities=14%  Similarity=0.077  Sum_probs=121.8

Q ss_pred             ceeeeeeeecCCCCEEEEEECCCCCEEE-EEeCCCc--EEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CC
Q psy11015        169 SCYKIRSFSGHRDGVWDVAVRPGQPVLG-SASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK  244 (360)
Q Consensus       169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~-sgs~Dg~--v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~  244 (360)
                      +++. ..+.+|.+.+.+++|+|+|+.|+ +++.|+.  |++||+.+++. ..+..|.+.+.+++|+|+|+.|++++. ++
T Consensus       212 tg~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g  289 (415)
T 2hqs_A          212 NGAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAG  289 (415)
T ss_dssp             TCCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred             CCcE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCC
Confidence            4443 35778889999999999999777 7777665  99999998876 567778899999999999998888876 45


Q ss_pred             --cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcEEEE
Q psy11015        245 --SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLF  319 (360)
Q Consensus       245 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i~iw  319 (360)
                        .|.+||+.++                             ....+..|...+.+++|+|+|++|++++.+   +.|.+|
T Consensus       290 ~~~i~~~d~~~~-----------------------------~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~  340 (415)
T 2hqs_A          290 RPQVYKVNINGG-----------------------------APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ  340 (415)
T ss_dssp             SCEEEEEETTSS-----------------------------CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred             CcEEEEEECCCC-----------------------------CEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE
Confidence              5777787765                             233445567789999999999999888764   589999


Q ss_pred             ECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        320 DVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       320 d~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      |+.+++. ..+..+. .+.+++|+|+|.+++++..
T Consensus       341 d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~  373 (415)
T 2hqs_A          341 DLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSS  373 (415)
T ss_dssp             ETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred             ECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEc
Confidence            9998876 4555554 8999999999998776653

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.66  E-value=3.6e-15  Score=130.82  Aligned_cols=149  Identities=12%  Similarity=0.005  Sum_probs=115.1

Q ss_pred             eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCC-cCeEEEEEeeCCCEEEEEe--CCCcEEEEE
Q psy11015        175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHS-GSVNSVRFLPNKDLVLSAS--GDKSVHIWQ  250 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-~~~~~~~~~h~-~~v~~i~~~p~~~~l~s~s--~d~~i~vwd  250 (360)
                      .+..|.+.|.+++|+|++++|++++ ++.|++||+.+ ++......+|. ..+.+++|+|+++++++++  .++...||.
T Consensus        36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~  114 (297)
T 2ojh_A           36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL  114 (297)
T ss_dssp             EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred             eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence            5567899999999999999999987 78999999999 88777766663 6789999999999999998  445666666


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE-EEECCCcEEEEEC--CCCeEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASWDRVANLFDV--ETGTIL  327 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~-tgs~dg~i~iwd~--~~~~~~  327 (360)
                      +....                           .....+..+. .+..++|+|+|++|+ +++.|+.++||++  .++. .
T Consensus       115 ~~~~~---------------------------~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~  165 (297)
T 2ojh_A          115 LPSTG---------------------------GTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-E  165 (297)
T ss_dssp             EETTC---------------------------CCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-E
T ss_pred             EECCC---------------------------CceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCc-c
Confidence            53210                           0123333333 488899999999887 7888999999985  3443 4


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ..+..+...+.+++|+|+|.+++.+.
T Consensus       166 ~~~~~~~~~~~~~~~s~dg~~l~~~~  191 (297)
T 2ojh_A          166 TRLTHGEGRNDGPDYSPDGRWIYFNS  191 (297)
T ss_dssp             EECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred             eEcccCCCccccceECCCCCEEEEEe
Confidence            56667888999999999999776543

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.65  E-value=3.5e-15  Score=130.94  Aligned_cols=153  Identities=14%  Similarity=0.192  Sum_probs=119.2

Q ss_pred             eeeecCCCCEEEEEECCCCCEEE-EEeCCCcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcEEEEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLG-SASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQ  250 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~-sgs~Dg~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i~vwd  250 (360)
                      ..+..+. .+.+++|+|+++.|+ +++.|+.++||+++. +.....+..|...+.+++|+|+|+.++.++ .++.+.+|+
T Consensus       123 ~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~  201 (297)
T 2ojh_A          123 RLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWR  201 (297)
T ss_dssp             EECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred             EEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEE
Confidence            3444443 489999999999776 788999999999632 234456667888999999999999887666 589999998


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-----------CcEEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----------RVANLF  319 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-----------g~i~iw  319 (360)
                      +...                           ......+..|...+.+++|+|+|++|++++.+           +.|.+|
T Consensus       202 ~~~~---------------------------~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~  254 (297)
T 2ojh_A          202 VRVD---------------------------GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM  254 (297)
T ss_dssp             EETT---------------------------SSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred             ECCC---------------------------CCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence            7522                           12345566777889999999999999888766           569999


Q ss_pred             ECCCCeE--EEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        320 DVETGTI--LQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       320 d~~~~~~--~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      |+.+++.  +..+.+|...+.+++|+|+|..++++..
T Consensus       255 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~  291 (297)
T 2ojh_A          255 DMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY  291 (297)
T ss_dssp             ETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred             ecCCCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence            9988765  4455578889999999999998876654

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.62  E-value=5.2e-15  Score=147.74  Aligned_cols=146  Identities=12%  Similarity=0.104  Sum_probs=117.4

Q ss_pred             CCCEEEEEECCCCCEEEEEeC-CC-----cEEEEECCCCeEEEEEeCCCc------------------------CeEEEE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASA-DR-----TVRLWSTQTGKCVLQYSGHSG------------------------SVNSVR  229 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~-Dg-----~v~iwd~~~~~~~~~~~~h~~------------------------~v~~i~  229 (360)
                      ...|.+++|+|+|+.|++++. |+     .|++||+.+++....+..+..                        .|.+++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            456899999999999999998 88     899999999988777765443                        378999


Q ss_pred             EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      |+|||++|++++. +.|.+||+.++..                          .....+..|...+..++|+|||++|+.
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~--------------------------~~~~~l~~~~~~~~~~~~SPDG~~la~  168 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGK--------------------------AAVRQLTHGEGFATDAKLSPKGGFVSF  168 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCST--------------------------TSCCBCCCSSSCEEEEEECTTSSEEEE
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCc--------------------------ceEEEcccCCcccccccCCCCCCEEEE
Confidence            9999999999887 8999999876510                          023345567788999999999999999


Q ss_pred             EECCCcEEEEECCCCeEEEEEecCCCc----------------eEEEEEcCCCCEEEccc
Q psy11015        310 ASWDRVANLFDVETGTILQSLTEPGEA----------------IRAAAGRTGGPIRASPL  353 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~~~~l~~h~~~----------------v~~~~~~~~g~~las~~  353 (360)
                      ++ ++.|++||+.+++.......+...                +.+++|+|+|++|+++.
T Consensus       169 ~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~  227 (741)
T 2ecf_A          169 IR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR  227 (741)
T ss_dssp             EE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred             Ee-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence            88 469999999998876554444332                47799999999887764

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.62  E-value=1.8e-15  Score=150.62  Aligned_cols=170  Identities=12%  Similarity=0.017  Sum_probs=123.2

Q ss_pred             eecCccceeeeeeeecCCC---CEEEEEECCCCCEEEEEeCC---------CcEEEEECCCCeEEEEEe---CCCcCeEE
Q psy11015        163 FKTSLLSCYKIRSFSGHRD---GVWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYS---GHSGSVNS  227 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~---~V~~l~~~~~~~~l~sgs~D---------g~v~iwd~~~~~~~~~~~---~h~~~v~~  227 (360)
                      +.++..++.....+.+|..   .|.+++|+|||++|++++.+         +.+.+||+.+++. ..+.   +|...+.+
T Consensus        40 ~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~  118 (723)
T 1xfd_A           40 RLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQY  118 (723)
T ss_dssp             EEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSB
T ss_pred             EEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccc
Confidence            4455566666777777765   49999999999999999875         7788999998875 3333   34445889


Q ss_pred             EEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---------CcEEEE
Q psy11015        228 VRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---------NVVIAA  298 (360)
Q Consensus       228 i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~i  298 (360)
                      ++|+|||+.|+.++. +.|++||+.++..........                   .-..+.++.         +.+.++
T Consensus       119 ~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~-------------------~~~~~~g~~~~v~~ee~~~~~~~~  178 (723)
T 1xfd_A          119 AGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK-------------------EGVIYNGLSDWLYEEEILKTHIAH  178 (723)
T ss_dssp             CCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB-------------------TTTEEEEECCHHHHHTTSSSSEEE
T ss_pred             cEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC-------------------CCceECcccceeEEEEeccCcceE
Confidence            999999999998886 789999988763322110000                   000011111         134789


Q ss_pred             EEcCCCCEEEEEECCC----------------------------------cEEEEECCCCeEEEEEecC------CCceE
Q psy11015        299 DWLSDGEQVITASWDR----------------------------------VANLFDVETGTILQSLTEP------GEAIR  338 (360)
Q Consensus       299 ~~sp~g~~l~tgs~dg----------------------------------~i~iwd~~~~~~~~~l~~h------~~~v~  338 (360)
                      +|+|||++|++++.|+                                  .|++||+.+++....+..+      ...+.
T Consensus       179 ~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~  258 (723)
T 1xfd_A          179 WWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYIT  258 (723)
T ss_dssp             EECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEE
T ss_pred             EECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeE
Confidence            9999999999887653                                  7999999988866666654      56889


Q ss_pred             EEEEcCCCCEEEccc
Q psy11015        339 AAAGRTGGPIRASPL  353 (360)
Q Consensus       339 ~~~~~~~g~~las~~  353 (360)
                      +++|+|+|+++++..
T Consensus       259 ~~~~SpDg~~l~~~~  273 (723)
T 1xfd_A          259 MVKWATSTKVAVTWL  273 (723)
T ss_dssp             EEEESSSSEEEEEEE
T ss_pred             EEEEeCCCeEEEEEE
Confidence            999999999887653

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.60  E-value=1.3e-13  Score=124.60  Aligned_cols=157  Identities=8%  Similarity=-0.007  Sum_probs=123.5

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC----CCcCeEEEEEeeCCCEEEEEe
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG----HSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~----h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      +..++..+..+..+...+.+++|+|+++.+++++.++.|.+||..+++.+..+..    +...+.+++|+|+++.++.++
T Consensus       170 d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~  249 (353)
T 3vgz_A          170 DGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITD  249 (353)
T ss_dssp             ETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred             cCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence            3356677777776666789999999999999999999999999999998887764    556788999999999776665


Q ss_pred             C-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEE
Q psy11015        242 G-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLF  319 (360)
Q Consensus       242 ~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iw  319 (360)
                      . ++.|.+||+.++...                            ..+....  ...++|+|+|+++++++ .++.|.+|
T Consensus       250 ~~~~~v~~~d~~~~~~~----------------------------~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~  299 (353)
T 3vgz_A          250 SKAAEVLVVDTRNGNIL----------------------------AKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVI  299 (353)
T ss_dssp             SSSSEEEEEETTTCCEE----------------------------EEEECSS--CCCEEEETTTTEEEEEETTTTEEEEE
T ss_pred             CCCCEEEEEECCCCcEE----------------------------EEEEcCC--CceEEECCCCCEEEEEECCCCeEEEE
Confidence            4 589999999876332                            2222222  24689999999776655 68999999


Q ss_pred             ECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        320 DVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       320 d~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      |..+++.+..+..+ ..+.+++|+|+|++++.+.
T Consensus       300 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~  332 (353)
T 3vgz_A          300 DAKSYKVVKTFDTP-THPNSLALSADGKTLYVSV  332 (353)
T ss_dssp             ETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEE
T ss_pred             ECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEE
Confidence            99999998888754 4689999999998555443

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.60  E-value=6.6e-14  Score=134.84  Aligned_cols=175  Identities=9%  Similarity=-0.043  Sum_probs=127.6

Q ss_pred             cCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC--CCCeEEEEEeCCCcCeEEEEEee
Q psy11015        155 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~--~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      .....+.+|  +..+++++.++..+.. +.+++|+|++++|++++.|++|++||+  .+++++..+. +...+..++|+|
T Consensus       156 ~~d~~V~v~--D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp  231 (543)
T 1nir_A          156 RDAGQIALV--DGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSK  231 (543)
T ss_dssp             GGGTEEEEE--ETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECC
T ss_pred             cCCCeEEEE--ECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCC
Confidence            334445455  4456778888884333 899999999999999999999999999  8899999988 456689999999


Q ss_pred             ----CCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC-CCcEEEEEEcCCCCE
Q psy11015        233 ----NKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH-SNVVIAADWLSDGEQ  306 (360)
Q Consensus       233 ----~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~i~~sp~g~~  306 (360)
                          +|+++++++ .+++|.+||..++.....+....                  .......-| ...+.++.++|++..
T Consensus       232 ~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g------------------~~~~~~~~~~~~~v~~i~~s~~~~~  293 (543)
T 1nir_A          232 FKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG------------------MTVDTQTYHPEPRVAAIIASHEHPE  293 (543)
T ss_dssp             STTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCE------------------ECSSSCCEESCCCEEEEEECSSSSE
T ss_pred             CcCCCCCEEEEEEccCCeEEEEeccccccceeecccC------------------cccCccccccCCceEEEEECCCCCE
Confidence                999998888 48999999988764432210000                  000000002 237899999997765


Q ss_pred             -EEEEECCCcEEEEECCCCeEEE--EEecCCCceEEEEEcCCCCEEEcc
Q psy11015        307 -VITASWDRVANLFDVETGTILQ--SLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       307 -l~tgs~dg~i~iwd~~~~~~~~--~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                       +++...+|.|.+||+.+++.+.  .+. +...+.+++|+|+|+++.++
T Consensus       294 ~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va  341 (543)
T 1nir_A          294 FIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTA  341 (543)
T ss_dssp             EEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEE
T ss_pred             EEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEE
Confidence             5667788999999998765443  443 56678899999999965543

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.60  E-value=8.6e-14  Score=125.09  Aligned_cols=168  Identities=13%  Similarity=0.062  Sum_probs=119.7

Q ss_pred             cCCeEEEeeecCc-cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC-CcEEEEECC--CCe--EEEEEeCCCcCeEEE
Q psy11015        155 QTSKIVSSFKTSL-LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-RTVRLWSTQ--TGK--CVLQYSGHSGSVNSV  228 (360)
Q Consensus       155 ~~~~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D-g~v~iwd~~--~~~--~~~~~~~h~~~v~~i  228 (360)
                      ..+..+..|.... .....+.. ..|...+.+++|+|++++|++++.+ +.|.+|++.  ++.  .+..+..+. .+.++
T Consensus        12 ~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~   89 (343)
T 1ri6_A           12 PESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHI   89 (343)
T ss_dssp             GGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEE
T ss_pred             CCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEE
Confidence            3445556665532 22233433 3577789999999999988888887 999999997  554  445565444 78999


Q ss_pred             EEeeCCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE
Q psy11015        229 RFLPNKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV  307 (360)
Q Consensus       229 ~~~p~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l  307 (360)
                      +|+|+|+++++++. ++.|.+||+..+..                         ......+..+ ..+.+++|+|+|+++
T Consensus        90 ~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-------------------------~~~~~~~~~~-~~~~~~~~s~dg~~l  143 (343)
T 1ri6_A           90 STDHQGQFVFVGSYNAGNVSVTRLEDGLP-------------------------VGVVDVVEGL-DGCHSANISPDNRTL  143 (343)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEEEETTEE-------------------------EEEEEEECCC-TTBCCCEECTTSSEE
T ss_pred             EEcCCCCEEEEEecCCCeEEEEECCCCcc-------------------------ccccccccCC-CCceEEEECCCCCEE
Confidence            99999998876665 88999999853211                         1123333333 458889999999998


Q ss_pred             EEEE-CCCcEEEEECCC-CeEEE----EEec-CCCceEEEEEcCCCCEEE
Q psy11015        308 ITAS-WDRVANLFDVET-GTILQ----SLTE-PGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       308 ~tgs-~dg~i~iwd~~~-~~~~~----~l~~-h~~~v~~~~~~~~g~~la  350 (360)
                      ++++ .++.|.+||+.+ ++...    .+.. ....+.+++|+|+|.+++
T Consensus       144 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~  193 (343)
T 1ri6_A          144 WVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY  193 (343)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred             EEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence            8887 899999999987 65432    2333 345788999999998554

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.59  E-value=1.3e-13  Score=124.61  Aligned_cols=161  Identities=7%  Similarity=-0.012  Sum_probs=124.4

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEEEeCCCcC---------eEEEEEee
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGHSGS---------VNSVRFLP  232 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~---------v~~i~~~p  232 (360)
                      +.++..+++.+..+... ..+.+++|+|+++. ++++..++.|.+||..+++.+..+..+.+.         +.+++|+|
T Consensus        72 ~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  150 (353)
T 3vgz_A           72 YRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD  150 (353)
T ss_dssp             EEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET
T ss_pred             EEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC
Confidence            33444556666666543 34778999999984 555566899999999999988888765432         78999999


Q ss_pred             CCCEEEEEe--CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE
Q psy11015        233 NKDLVLSAS--GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA  310 (360)
Q Consensus       233 ~~~~l~s~s--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg  310 (360)
                      +|+.+++++  .++.|.+||+.++..                            ...+..+...+.+++|+|+|++++++
T Consensus       151 dg~~l~~~~~~~~~~i~~~d~~~~~~----------------------------~~~~~~~~~~~~~~~~s~dg~~l~~~  202 (353)
T 3vgz_A          151 ATNTVYISGIGKESVIWVVDGGNIKL----------------------------KTAIQNTGKMSTGLALDSEGKRLYTT  202 (353)
T ss_dssp             TTTEEEEEEESSSCEEEEEETTTTEE----------------------------EEEECCCCTTCCCCEEETTTTEEEEE
T ss_pred             CCCEEEEEecCCCceEEEEcCCCCce----------------------------EEEecCCCCccceEEECCCCCEEEEE
Confidence            999777765  478899999987632                            33344344557789999999999999


Q ss_pred             ECCCcEEEEECCCCeEEEEEec----CCCceEEEEEcCCCCEEEcc
Q psy11015        311 SWDRVANLFDVETGTILQSLTE----PGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       311 s~dg~i~iwd~~~~~~~~~l~~----h~~~v~~~~~~~~g~~las~  352 (360)
                      +.++.|.+||..+++.+..+..    +...+.+++|+|+|..++.+
T Consensus       203 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~  248 (353)
T 3vgz_A          203 NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT  248 (353)
T ss_dssp             CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred             cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence            9999999999999998888764    45578899999999865544

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.59  E-value=3e-14  Score=147.81  Aligned_cols=151  Identities=9%  Similarity=-0.010  Sum_probs=127.5

Q ss_pred             eeeeecCCC-CEEEEEECCCCCEEEEEeCCCcEE-EEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        173 IRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVR-LWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       173 ~~~l~~h~~-~V~~l~~~~~~~~l~sgs~Dg~v~-iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      ...+..|.+ .+.+++|+ ++..|++++.++.+. +|++.++.... +.+|...+.+++|+|+|++|++++.++.|++||
T Consensus       329 ~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d  406 (1045)
T 1k32_A          329 VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVD  406 (1045)
T ss_dssp             EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence            344677888 89999999 999999999988898 99998776544 447888999999999999999999999999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC----------cEEEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----------VANLFD  320 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg----------~i~iwd  320 (360)
                      +.++.                            ....+.+|...+.+++|+|+|++|++++.++          .|++||
T Consensus       407 ~~tg~----------------------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d  458 (1045)
T 1k32_A          407 LETGK----------------------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD  458 (1045)
T ss_dssp             TTTCC----------------------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred             CCCCc----------------------------eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence            98762                            2333447888899999999999998887654          899999


Q ss_pred             CCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        321 VETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       321 ~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      +.+++ +..+..|...+.+++|+|+|+.++.++.
T Consensus       459 ~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~  491 (1045)
T 1k32_A          459 MEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY  491 (1045)
T ss_dssp             TTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred             CCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence            99887 6778888888999999999998776654

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.57  E-value=2.6e-13  Score=121.71  Aligned_cols=158  Identities=9%  Similarity=0.083  Sum_probs=117.1

Q ss_pred             cceee-eeeeecCCCCEEEEEECCCCCEEEEEeCCC---cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeC
Q psy11015        168 LSCYK-IRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASG  242 (360)
Q Consensus       168 ~~~~~-~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg---~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~  242 (360)
                      .++.. ...+..+..+..+++|+|++++++++..++   .|.+||+.+++.+..+.. ...+.+++|+|+|++++ ++..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~  148 (331)
T 3u4y_A           70 QLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRS  148 (331)
T ss_dssp             SSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEET
T ss_pred             CCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecC
Confidence            34444 667777777777799999999888555553   899999999998888874 45579999999998554 5566


Q ss_pred             CCc-EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEE
Q psy11015        243 DKS-VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFD  320 (360)
Q Consensus       243 d~~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd  320 (360)
                      ++. +.+|++........                       .. .........+..++|+|+|++++.++ .++.|.+||
T Consensus       149 ~~~~i~~~~~~~~g~~~~-----------------------~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d  204 (331)
T 3u4y_A          149 SANTVRRFKIDADGVLFD-----------------------TG-QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILE  204 (331)
T ss_dssp             TTTEEEEEEECTTCCEEE-----------------------EE-EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCceEEEEEECCCCcEee-----------------------cC-CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEE
Confidence            688 99999875422111                       00 11223445678999999999765554 689999999


Q ss_pred             CCCCeE---EEEEecCCCceEEEEEcCCCCEEEc
Q psy11015        321 VETGTI---LQSLTEPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       321 ~~~~~~---~~~l~~h~~~v~~~~~~~~g~~las  351 (360)
                      +.+++.   +..+..+ ..+.+++|+|+|++++.
T Consensus       205 ~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v  237 (331)
T 3u4y_A          205 TQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYV  237 (331)
T ss_dssp             CSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEE
T ss_pred             CCCCcccceeeeccCC-CCCceEEECCCCCEEEE
Confidence            999887   7777644 56789999999995543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.56  E-value=2.2e-15  Score=149.99  Aligned_cols=145  Identities=12%  Similarity=0.046  Sum_probs=115.9

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc---CeEEEEEeeCCCEEEEEeCC---------CcEEEE
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPNKDLVLSASGD---------KSVHIW  249 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~---~v~~i~~~p~~~~l~s~s~d---------~~i~vw  249 (360)
                      .+.+++|+|+|.++++ +.||+|++||+.+++....+.+|..   .|.+++|+|||++|++++.+         +.+.+|
T Consensus        18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~   96 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS   96 (723)
T ss_dssp             CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred             cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence            4678899999997766 7899999999999998888887765   49999999999999999875         678899


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS  329 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~  329 (360)
                      |+.++...                          .+....+|...+..++|+|||++|+.++. +.|++||+.+++....
T Consensus        97 d~~~~~~~--------------------------~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~  149 (723)
T 1xfd_A           97 KIPHGDPQ--------------------------SLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRV  149 (723)
T ss_dssp             ESSSCCCE--------------------------ECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEE
T ss_pred             ECCCCceE--------------------------eccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEE
Confidence            99876321                          12222345556888999999999999986 8999999999887666


Q ss_pred             EecCCCce------------------EEEEEcCCCCEEEcccc
Q psy11015        330 LTEPGEAI------------------RAAAGRTGGPIRASPLL  354 (360)
Q Consensus       330 l~~h~~~v------------------~~~~~~~~g~~las~~~  354 (360)
                      ...+...+                  .+++|+|+|+.|+++..
T Consensus       150 ~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~  192 (723)
T 1xfd_A          150 VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI  192 (723)
T ss_dssp             ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred             ecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence            65544433                  78999999998887763

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.56  E-value=2.5e-13  Score=122.97  Aligned_cols=169  Identities=11%  Similarity=0.042  Sum_probs=116.2

Q ss_pred             CeEEEeeecCccceeeee-eeecCCCCEEEEEECCCCCEEEEEeC---CCcEEEEECCCCe--EEEEEeCCCcCeEEEEE
Q psy11015        157 SKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGK--CVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~-~l~~h~~~V~~l~~~~~~~~l~sgs~---Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~  230 (360)
                      +.-+.+|.++..++.... ....+...+..++|+|+++ |++++.   ++.|.+|++.++.  .+..+..+...+..++|
T Consensus        15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~   93 (347)
T 3hfq_A           15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV   93 (347)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence            344555666555544432 3345567788899999998 555544   6899999998775  45555557778899999


Q ss_pred             eeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee---------CCCCcEEEEEE
Q psy11015        231 LPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL---------GHSNVVIAADW  300 (360)
Q Consensus       231 ~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~i~~  300 (360)
                      +|+|+++++++ .++++.+|++.......                         .+..+.         .+...+.+++|
T Consensus        94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~-------------------------~~~~~~~~~~~p~~~~~~~~~~~~~~  148 (347)
T 3hfq_A           94 DEARQLVYSANYHKGTAEVMKIAADGALT-------------------------LTDTVQHSGHGPRPEQDGSHIHYTDL  148 (347)
T ss_dssp             ETTTTEEEEEETTTTEEEEEEECTTSCEE-------------------------EEEEEECCCCCSSTTCSSCCEEEEEE
T ss_pred             CCCCCEEEEEeCCCCEEEEEEeCCCCCee-------------------------ecceeecCCCCCCccccCCCceEEEE
Confidence            99999888887 68999999986321110                         111111         12345889999


Q ss_pred             cCCCCEEEEEECCCcEEEEECC-CCeEE--EEEec-CCCceEEEEEcCCCCEEEc
Q psy11015        301 LSDGEQVITASWDRVANLFDVE-TGTIL--QSLTE-PGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd~~-~~~~~--~~l~~-h~~~v~~~~~~~~g~~las  351 (360)
                      +|+|+.++++..++.|.+|++. ++...  ..+.. ....+..++|+|+|++++.
T Consensus       149 spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v  203 (347)
T 3hfq_A          149 TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFL  203 (347)
T ss_dssp             CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred             CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEE
Confidence            9999966666678899999998 56433  22333 2346788999999995544

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.56  E-value=2.6e-13  Score=121.72  Aligned_cols=163  Identities=15%  Similarity=0.119  Sum_probs=116.5

Q ss_pred             CCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCeE-EEEEeCCCcCeEEEEEeeC
Q psy11015        156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPN  233 (360)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~~~~-~~~~~~h~~~v~~i~~~p~  233 (360)
                      .+..+..|..  .+++.+..+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..+..+..+++|+|+
T Consensus        18 ~~~~v~~~d~--~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d   94 (331)
T 3u4y_A           18 HLRRISFFST--DTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPD   94 (331)
T ss_dssp             GGTEEEEEET--TTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTT
T ss_pred             CCCeEEEEeC--cccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCC
Confidence            3444545544  3456666666666677 9999999996666655 89999999999987 7777767666666999999


Q ss_pred             CCEEEEEeCCC---cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE-
Q psy11015        234 KDLVLSASGDK---SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT-  309 (360)
Q Consensus       234 ~~~l~s~s~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t-  309 (360)
                      |++++++..++   .|.+||+.++..                            +..+.. ...+.+++|+|+|+++++ 
T Consensus        95 g~~l~~~~~~~~~~~i~v~d~~~~~~----------------------------~~~~~~-~~~~~~~~~spdg~~l~~~  145 (331)
T 3u4y_A           95 DQFAVTVTGLNHPFNMQSYSFLKNKF----------------------------ISTIPI-PYDAVGIAISPNGNGLILI  145 (331)
T ss_dssp             SSEEEECCCSSSSCEEEEEETTTTEE----------------------------EEEEEC-CTTEEEEEECTTSSCEEEE
T ss_pred             CCEEEEecCCCCcccEEEEECCCCCe----------------------------EEEEEC-CCCccceEECCCCCEEEEE
Confidence            99998555553   899999987632                            233333 345689999999986654 


Q ss_pred             EECCCc-EEEEECCCCeEE----EEEecCCCceEEEEEcCCCCEEE
Q psy11015        310 ASWDRV-ANLFDVETGTIL----QSLTEPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       310 gs~dg~-i~iwd~~~~~~~----~~l~~h~~~v~~~~~~~~g~~la  350 (360)
                      +..++. +.+|++.....+    .....+.....+++|+|+|++++
T Consensus       146 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~  191 (331)
T 3u4y_A          146 DRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAF  191 (331)
T ss_dssp             EETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEE
T ss_pred             ecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEE
Confidence            456688 999998753322    12223455689999999998443

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.56  E-value=2e-14  Score=143.47  Aligned_cols=149  Identities=11%  Similarity=0.050  Sum_probs=111.5

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      .|.+++|+|+|+.|++++. +.|++||+.++.  .+..+..|...+.+++|+|||++|+.++ ++.|.+||+.++.....
T Consensus       110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~  187 (741)
T 2ecf_A          110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL  187 (741)
T ss_dssp             ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred             CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence            3889999999999999887 899999999873  3455677888999999999999999887 46899999987743321


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCC--------CCcEEEEEEcCCCCEEEEEECCC-----------------
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGH--------SNVVIAADWLSDGEQVITASWDR-----------------  314 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--------~~~v~~i~~sp~g~~l~tgs~dg-----------------  314 (360)
                      .....                    .....++        ...+.+++|+|||++|++++.|+                 
T Consensus       188 ~~~~~--------------------~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~  247 (741)
T 2ecf_A          188 TADGS--------------------TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTD  247 (741)
T ss_dssp             CCCCC--------------------SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEE
T ss_pred             ccCCc--------------------cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCccc
Confidence            10000                    0000011        11247799999999999988776                 


Q ss_pred             ----------------cEEEEECCC-CeEEEEEe--cCCCceEEEEEcCCCCEEEccc
Q psy11015        315 ----------------VANLFDVET-GTILQSLT--EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       315 ----------------~i~iwd~~~-~~~~~~l~--~h~~~v~~~~~~~~g~~las~~  353 (360)
                                      .|.+||+.+ ++......  .|...+.+++| |+|++++.+.
T Consensus       248 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~  304 (741)
T 2ecf_A          248 VIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQR  304 (741)
T ss_dssp             EEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEE
T ss_pred             ceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEE
Confidence                            789999988 87554433  37788999999 9999888543

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.55  E-value=1.4e-12  Score=116.70  Aligned_cols=187  Identities=9%  Similarity=0.068  Sum_probs=127.8

Q ss_pred             EEEeeecCccceeeeeeeec-C----CCCEEEEEECCCCCEEEEEe------------CCCcEEEEECCCCeEEEEEeCC
Q psy11015        159 IVSSFKTSLLSCYKIRSFSG-H----RDGVWDVAVRPGQPVLGSAS------------ADRTVRLWSTQTGKCVLQYSGH  221 (360)
Q Consensus       159 ~~~~~~~~~~~~~~~~~l~~-h----~~~V~~l~~~~~~~~l~sgs------------~Dg~v~iwd~~~~~~~~~~~~h  221 (360)
                      .+..|..  .++..+..+.. +    ...+.+++|+|+++.+++++            .++.|.+||+.+++.+..+.. 
T Consensus        57 ~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-  133 (337)
T 1pby_B           57 SLVKIDL--VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-  133 (337)
T ss_dssp             EEEEEET--TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-
T ss_pred             eEEEEEC--CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-
Confidence            3444443  34455555542 2    23677899999999888886            679999999999988888774 


Q ss_pred             CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCC-CCCCCC-C------CCCC-Cc--------------
Q psy11015        222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDND-SDLDES-K------EPDE-SS--------------  278 (360)
Q Consensus       222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~-~------~~~~-~~--------------  278 (360)
                      ...+.+++|+|+|++++++  ++.|.+||+.++........... ...... .      .... ..              
T Consensus       134 ~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~  211 (337)
T 1pby_B          134 PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDP  211 (337)
T ss_dssp             CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCT
T ss_pred             CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccc
Confidence            4567899999999988877  68899999998876654433321 111000 0      0000 00              


Q ss_pred             --------------cccccc-eeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEc
Q psy11015        279 --------------ITLRTP-VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR  343 (360)
Q Consensus       279 --------------~~~~~~-~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~  343 (360)
                                    ...... ...+..+...+.+++|+|+|++++++  ++.|.+||+.+++.+..+..+ ..+.+++|+
T Consensus       212 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s  288 (337)
T 1pby_B          212 ADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVS  288 (337)
T ss_dssp             TSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEEC
T ss_pred             ccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEEC
Confidence                          000000 11233455567889999999999988  799999999999988887644 467899999


Q ss_pred             CCCCEEEccc
Q psy11015        344 TGGPIRASPL  353 (360)
Q Consensus       344 ~~g~~las~~  353 (360)
                      |+|++++++.
T Consensus       289 ~dg~~l~~~~  298 (337)
T 1pby_B          289 TDGSTVWLGG  298 (337)
T ss_dssp             TTSCEEEEES
T ss_pred             CCCCEEEEEc
Confidence            9998666543

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.55  E-value=1.8e-13  Score=131.77  Aligned_cols=134  Identities=13%  Similarity=0.063  Sum_probs=112.3

Q ss_pred             EECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc--ccCeeEeeeCCCC
Q psy11015        187 AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA--VINWECLVSNNDN  264 (360)
Q Consensus       187 ~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~--~~~~~~~~~~~~~  264 (360)
                      +++|++.++++++.|++|.+||..+++++..+..+.. +..++|+|+|+++++++.|++|.+||+  .++          
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~----------  212 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP----------  212 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSC----------
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCC----------
Confidence            3788888999999999999999999999999984333 899999999999999999999999999  554          


Q ss_pred             CCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC----CCCEEEEEE-CCCcEEEEECCCCeEEEEEecC------
Q psy11015        265 DSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS----DGEQVITAS-WDRVANLFDVETGTILQSLTEP------  333 (360)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp----~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h------  333 (360)
                                        ..+.++. +...+.+++|+|    +|+++++++ .+++|.+||..+++++.++..+      
T Consensus       213 ------------------~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~  273 (543)
T 1nir_A          213 ------------------TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT  273 (543)
T ss_dssp             ------------------EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred             ------------------cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCc
Confidence                              2344454 345689999999    999999888 4899999999999999988652      


Q ss_pred             -----CCceEEEEEcCCCCEEE
Q psy11015        334 -----GEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       334 -----~~~v~~~~~~~~g~~la  350 (360)
                           ...+.+++++|++..++
T Consensus       274 ~~~~~~~~v~~i~~s~~~~~~~  295 (543)
T 1nir_A          274 QTYHPEPRVAAIIASHEHPEFI  295 (543)
T ss_dssp             CCEESCCCEEEEEECSSSSEEE
T ss_pred             cccccCCceEEEEECCCCCEEE
Confidence                 23788999999776443

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.54  E-value=8.6e-13  Score=118.49  Aligned_cols=165  Identities=8%  Similarity=0.008  Sum_probs=115.7

Q ss_pred             eEEEeeecC--ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECC---CCeEEEEEeCCCcCeEEEEEe
Q psy11015        158 KIVSSFKTS--LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQ---TGKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       158 ~~~~~~~~~--~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~---~~~~~~~~~~h~~~v~~i~~~  231 (360)
                      ..+..|...  ......+..+..+. .+.+++|+|+++.|++++. ++.|.+||+.   .+..+..+..+ ..+.+++|+
T Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s  137 (343)
T 1ri6_A           60 FRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANIS  137 (343)
T ss_dssp             TEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEEC
T ss_pred             CeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEEC
Confidence            556666655  33445566666655 8899999999997766654 8899999994   44555555543 468899999


Q ss_pred             eCCCEEEEEe-CCCcEEEEEccc-CeeEeeeCCCCCCCCCCCCCCCCCcccccccee--EeeC-CCCcEEEEEEcCCCCE
Q psy11015        232 PNKDLVLSAS-GDKSVHIWQAVI-NWECLVSNNDNDSDLDESKEPDESSITLRTPVK--ELLG-HSNVVIAADWLSDGEQ  306 (360)
Q Consensus       232 p~~~~l~s~s-~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-h~~~v~~i~~sp~g~~  306 (360)
                      |+|+++++++ .++.|.+||+.+ +...                          ...  .+.. ....+.+++|+|+|++
T Consensus       138 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~pdg~~  191 (343)
T 1ri6_A          138 PDNRTLWVPALKQDRICLFTVSDDGHLV--------------------------AQDPAEVTTVEGAGPRHMVFHPNEQY  191 (343)
T ss_dssp             TTSSEEEEEEGGGTEEEEEEECTTSCEE--------------------------EEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred             CCCCEEEEecCCCCEEEEEEecCCCcee--------------------------eecccccccCCCCCcceEEECCCCCE
Confidence            9999888877 899999999976 4211                          111  2222 3347889999999998


Q ss_pred             EEEEE-CCCcEEEEECC--CCeE--EEEEec---C---CCceEEEEEcCCCCEEE
Q psy11015        307 VITAS-WDRVANLFDVE--TGTI--LQSLTE---P---GEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       307 l~tgs-~dg~i~iwd~~--~~~~--~~~l~~---h---~~~v~~~~~~~~g~~la  350 (360)
                      +++++ .++.+.+||+.  ++..  ...+..   .   ...+.+++|+|+|.+++
T Consensus       192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~  246 (343)
T 1ri6_A          192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY  246 (343)
T ss_dssp             EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred             EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence            76555 78999999995  3432  333321   1   23567899999998665

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.52  E-value=5e-12  Score=114.32  Aligned_cols=146  Identities=10%  Similarity=0.045  Sum_probs=106.5

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEE--EEEeCCC-cCeEEEEEeeCCCEEEE-EeCCCcEEEEEccc--C
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCV--LQYSGHS-GSVNSVRFLPNKDLVLS-ASGDKSVHIWQAVI--N  254 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~-~~~~~--~~~~~h~-~~v~~i~~~p~~~~l~s-~s~d~~i~vwd~~~--~  254 (360)
                      .+.+++|+|++++++++..++.|++|++. ++...  ..+..+. ..+..++|+|+|+++++ +..++.+.+|++..  +
T Consensus       142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g  221 (347)
T 3hfq_A          142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG  221 (347)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred             CceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence            48899999999977777778999999998 55432  2233332 36789999999996555 56788999999874  3


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC------CCcEEEEEEcCCCCEE-EEEECCCcEEEEECC---CC
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH------SNVVIAADWLSDGEQV-ITASWDRVANLFDVE---TG  324 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~i~~sp~g~~l-~tgs~dg~i~iwd~~---~~  324 (360)
                      ...                          ....+...      ...+..++|+|+|++| +++..++.|.+|++.   +.
T Consensus       222 ~~~--------------------------~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~  275 (347)
T 3hfq_A          222 AFT--------------------------QLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL  275 (347)
T ss_dssp             EEE--------------------------EEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE
T ss_pred             ceE--------------------------EeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE
Confidence            211                          11222221      1458899999999987 556678999999987   33


Q ss_pred             eEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        325 TILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ..+..+..+...+.+++|+|+|++++.+.
T Consensus       276 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~  304 (347)
T 3hfq_A          276 TLIQQISTEGDFPRDFDLDPTEAFVVVVN  304 (347)
T ss_dssp             EEEEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred             EEeEEEecCCCCcCeEEECCCCCEEEEEE
Confidence            56667777777789999999999776554

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.52  E-value=8e-14  Score=135.43  Aligned_cols=135  Identities=12%  Similarity=0.071  Sum_probs=111.2

Q ss_pred             EEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--cEEEEEcccCeeE
Q psy11015        184 WDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWEC  257 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~D----g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i~vwd~~~~~~~  257 (360)
                      ++++|+|||+.|++++.|    +.|++||+.+++.. .+.+|.+.+.+++|+|||+.|+++..++  .|.+||+.++.. 
T Consensus       153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~-  230 (582)
T 3o4h_A          153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV-  230 (582)
T ss_dssp             CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE-
T ss_pred             ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE-
Confidence            789999999999988887    78999999988754 6778889999999999999999888888  899999887622 


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEE--------EcCCCCEEEEEECCCcEEEEECCCCeEEEE
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD--------WLSDGEQVITASWDRVANLFDVETGTILQS  329 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~--------~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~  329 (360)
                                                 . .+.+|...+..++        |+|||..+++++.||++++|++  |+... 
T Consensus       231 ---------------------------~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~-  279 (582)
T 3o4h_A          231 ---------------------------E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE-  279 (582)
T ss_dssp             ---------------------------E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC-
T ss_pred             ---------------------------E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec-
Confidence                                       2 3445555555555        9999988899999999999999  76554 


Q ss_pred             EecCCCceEEEEEcCCCCEEEcccc
Q psy11015        330 LTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       330 l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                        .+.+.+.+++|+ +|.++++++.
T Consensus       280 --~~~~~v~~~~~s-dg~~l~~~s~  301 (582)
T 3o4h_A          280 --APQGNHGRVVLW-RGKLVTSHTS  301 (582)
T ss_dssp             --CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred             --cCCCceEEEEec-CCEEEEEEcC
Confidence              345778999999 8988876553

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.52  E-value=7.2e-15  Score=146.35  Aligned_cols=168  Identities=11%  Similarity=0.062  Sum_probs=118.5

Q ss_pred             cCccceeeeeeeecCCC---CEEEEEECCCCCEEEEEeC---------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015        165 TSLLSCYKIRSFSGHRD---GVWDVAVRPGQPVLGSASA---------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP  232 (360)
Q Consensus       165 ~~~~~~~~~~~l~~h~~---~V~~l~~~~~~~~l~sgs~---------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p  232 (360)
                      ++..++.....+.+|..   .|.+++|+|||+.|++++.         |+.|++||+.+++.+.... ....+.+++|+|
T Consensus        41 ~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SP  119 (719)
T 1z68_A           41 YNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSP  119 (719)
T ss_dssp             EESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECS
T ss_pred             EEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECC
Confidence            33444555555655544   4899999999999998876         7899999999987621111 235688999999


Q ss_pred             CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcE---------EEEEEcCC
Q psy11015        233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVV---------IAADWLSD  303 (360)
Q Consensus       233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---------~~i~~sp~  303 (360)
                      ||+.|+.++ |+.|++||+.++........                   ......+.||...|         .+++|+||
T Consensus       120 DG~~la~~~-~~~i~~~~~~~g~~~~l~~~-------------------~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD  179 (719)
T 1z68_A          120 VGSKLAYVY-QNNIYLKQRPGDPPFQITFN-------------------GRENKIFNGIPDWVYEEEMLATKYALWWSPN  179 (719)
T ss_dssp             STTCEEEEE-TTEEEEESSTTSCCEECCCC-------------------CBTTTEEESSCCHHHHHHTTCSSCCEEECTT
T ss_pred             CCCEEEEEE-CCeEEEEeCCCCCcEEEecC-------------------CCcCCeEcccccceeeeecccCcccEEECCC
Confidence            999999885 78999999987743321000                   00111223443332         58999999


Q ss_pred             CCEEEEEECCC----------------------------------cEEEEECCCCeEE---E-----EEecCCCceEEEE
Q psy11015        304 GEQVITASWDR----------------------------------VANLFDVETGTIL---Q-----SLTEPGEAIRAAA  341 (360)
Q Consensus       304 g~~l~tgs~dg----------------------------------~i~iwd~~~~~~~---~-----~l~~h~~~v~~~~  341 (360)
                      |++|++++.|.                                  .|++||+.+++..   .     .+.+|...+..++
T Consensus       180 G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (719)
T 1z68_A          180 GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLT  259 (719)
T ss_dssp             SSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEE
T ss_pred             CCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeE
Confidence            99999988652                                  7889999987642   1     1335778899999


Q ss_pred             EcCCCCEEEccc
Q psy11015        342 GRTGGPIRASPL  353 (360)
Q Consensus       342 ~~~~g~~las~~  353 (360)
                      |+|+|.++++..
T Consensus       260 ~SpD~~~~~~~~  271 (719)
T 1z68_A          260 WVTDERVCLQWL  271 (719)
T ss_dssp             ESSSSEEEEEEE
T ss_pred             EeCCCeEEEEEe
Confidence            999998887744

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.52  E-value=1.2e-13  Score=143.29  Aligned_cols=144  Identities=9%  Similarity=-0.052  Sum_probs=123.1

Q ss_pred             CCCCEEEEEEC-CCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc-CeEEEEEeeCCCEEEEEeCCCcEE-EEEcccCe
Q psy11015        179 HRDGVWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-SVNSVRFLPNKDLVLSASGDKSVH-IWQAVINW  255 (360)
Q Consensus       179 h~~~V~~l~~~-~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~-~v~~i~~~p~~~~l~s~s~d~~i~-vwd~~~~~  255 (360)
                      |.+.+.+++|+ |+|..|++++ ++.|.+|++..+... .+..|.+ .+.+++|+ +|+.++.++.+..+. +||+..+ 
T Consensus       294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~-  369 (1045)
T 1k32_A          294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG-  369 (1045)
T ss_dssp             ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC-
T ss_pred             cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC-
Confidence            45579999999 9999888888 889999999887654 4666777 89999999 999999998888888 8888755 


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCC
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE  335 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~  335 (360)
                                                  ....+.+|...+..++|+|+|++|++++.++.|++||+.+++....+..|..
T Consensus       370 ----------------------------~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~  421 (1045)
T 1k32_A          370 ----------------------------KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA  421 (1045)
T ss_dssp             ----------------------------CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred             ----------------------------CceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC
Confidence                                        2233447778899999999999999999999999999999998888878999


Q ss_pred             ceEEEEEcCCCCEEEcccc
Q psy11015        336 AIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~~~  354 (360)
                      .+.+++|+|+|++++++..
T Consensus       422 ~v~~~~~SpDG~~la~~~~  440 (1045)
T 1k32_A          422 MITDFTISDNSRFIAYGFP  440 (1045)
T ss_dssp             CCCCEEECTTSCEEEEEEE
T ss_pred             CccceEECCCCCeEEEEec
Confidence            9999999999998877653

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.52  E-value=7.9e-14  Score=135.47  Aligned_cols=139  Identities=13%  Similarity=-0.007  Sum_probs=110.3

Q ss_pred             EEEEEECCCCC--EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC----CcEEEEEcccCee
Q psy11015        183 VWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----KSVHIWQAVINWE  256 (360)
Q Consensus       183 V~~l~~~~~~~--~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d----~~i~vwd~~~~~~  256 (360)
                      +...+|+|+++  .+++++.|+ +.+||+.++++......+ .  .+++|+|||+++++++.|    +.|++||+.++  
T Consensus       112 ~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g--  185 (582)
T 3o4h_A          112 MRILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG--  185 (582)
T ss_dssp             BEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC--
T ss_pred             ceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC--
Confidence            33557777765  455555554 559999999876655533 3  789999999999988877    78999998876  


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC--cEEEEECCCCeEEEEEecCC
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR--VANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg--~i~iwd~~~~~~~~~l~~h~  334 (360)
                                                 ....+..|...+..++|+|||++|++++.+|  .|++||+.+++.. .+..|.
T Consensus       186 ---------------------------~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~  237 (582)
T 3o4h_A          186 ---------------------------GLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS  237 (582)
T ss_dssp             ---------------------------CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC
T ss_pred             ---------------------------CceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC
Confidence                                       3446778888999999999999999888898  8999999999887 777787


Q ss_pred             CceEEEE--------EcCCCCEEEccccc
Q psy11015        335 EAIRAAA--------GRTGGPIRASPLLL  355 (360)
Q Consensus       335 ~~v~~~~--------~~~~g~~las~~~~  355 (360)
                      ..+..++        |+|+|.+++++...
T Consensus       238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~  266 (582)
T 3o4h_A          238 KDFSSYRPTAITWLGYLPDGRLAVVARRE  266 (582)
T ss_dssp             SHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred             cChhhhhhccccceeEcCCCcEEEEEEcC
Confidence            7777777        99999888877643

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.51  E-value=1.4e-12  Score=118.64  Aligned_cols=148  Identities=10%  Similarity=0.017  Sum_probs=104.9

Q ss_pred             CEEEEEECCCCCEEEEEe-CCCcEEEEECCCCe-------E------EEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcE
Q psy11015        182 GVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGK-------C------VLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSV  246 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs-~Dg~v~iwd~~~~~-------~------~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i  246 (360)
                      .+.+++|+|++++++.++ .++.|.+|++....       .      ......+...+..++|+|+|+++++++ .++.|
T Consensus       156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v  235 (361)
T 3scy_A          156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV  235 (361)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred             cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence            458899999999665554 58899999887543       1      111223455688999999999887776 68999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC--CcEEEEECC--
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVE--  322 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d--g~i~iwd~~--  322 (360)
                      .+||+.++.....                       ..+.....+...+..++|+|+|++|++++.+  +.|.+|++.  
T Consensus       236 ~v~~~~~g~~~~~-----------------------~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~  292 (361)
T 3scy_A          236 IAFRYADGMLDEI-----------------------QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET  292 (361)
T ss_dssp             EEEEEETTEEEEE-----------------------EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT
T ss_pred             EEEEecCCceEEe-----------------------EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC
Confidence            9999986532111                       0112222344557899999999999776654  899999985  


Q ss_pred             CCe--EEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        323 TGT--ILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       323 ~~~--~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ++.  .+..+.. ...+.+++|+|+|++++.+.
T Consensus       293 ~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~  324 (361)
T 3scy_A          293 NGTLTKVGYQLT-GIHPRNFIITPNGKYLLVAC  324 (361)
T ss_dssp             TCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred             CCcEEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence            454  4455554 56788999999999777654

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.51  E-value=1e-13  Score=137.73  Aligned_cols=154  Identities=10%  Similarity=0.099  Sum_probs=115.3

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC-----CeEEEEEeCCCcC--------------eEEEEEeeCC
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGS--------------VNSVRFLPNK  234 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-----~~~~~~~~~h~~~--------------v~~i~~~p~~  234 (360)
                      ..+..|.+.+.+++|+|+|+.|+++ .|+.|++||+.+     ++.......+...              +.++.|+|||
T Consensus       114 ~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg  192 (706)
T 2z3z_A          114 TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG  192 (706)
T ss_dssp             EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred             EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence            3455677789999999999999885 689999999998     8766554444433              4899999999


Q ss_pred             CEEEEEe---------------------------------CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccc
Q psy11015        235 DLVLSAS---------------------------------GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITL  281 (360)
Q Consensus       235 ~~l~s~s---------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (360)
                      ++|++++                                 .+..|.+||+.++....                       
T Consensus       193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~-----------------------  249 (706)
T 2z3z_A          193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY-----------------------  249 (706)
T ss_dssp             SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE-----------------------
T ss_pred             CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe-----------------------
Confidence            9999987                                 44678999987763221                       


Q ss_pred             ccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC-----cEEEEECCCCeEEEEEe-c-CCC---ceEEEEEcC--CCCEE
Q psy11015        282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDR-----VANLFDVETGTILQSLT-E-PGE---AIRAAAGRT--GGPIR  349 (360)
Q Consensus       282 ~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg-----~i~iwd~~~~~~~~~l~-~-h~~---~v~~~~~~~--~g~~l  349 (360)
                         +.....|...+.+++|+|+|++|++++.++     .|.+||+.+++....+. . +..   .+.+++|+|  +|.++
T Consensus       250 ---~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l  326 (706)
T 2z3z_A          250 ---LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI  326 (706)
T ss_dssp             ---CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE
T ss_pred             ---eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEE
Confidence               111124677899999999999999988776     89999999994444332 2 222   246789999  99988


Q ss_pred             Ecccc
Q psy11015        350 ASPLL  354 (360)
Q Consensus       350 as~~~  354 (360)
                      +++..
T Consensus       327 ~~~~~  331 (706)
T 2z3z_A          327 WQSRR  331 (706)
T ss_dssp             EEECT
T ss_pred             EEEcc
Confidence            87653

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.50  E-value=1.1e-12  Score=117.48  Aligned_cols=143  Identities=13%  Similarity=0.137  Sum_probs=98.5

Q ss_pred             CCeEEEeeecCccceeeeeeeec-CCC-CEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCC-----CcCeEE
Q psy11015        156 TSKIVSSFKTSLLSCYKIRSFSG-HRD-GVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNS  227 (360)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~~-h~~-~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h-----~~~v~~  227 (360)
                      ....+..|..  .+++.+..+.. +.. .+.+++|+|+++.+ ++++.++.|.+||+.+++.+..+...     ...+.+
T Consensus         9 ~~~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~   86 (337)
T 1pby_B            9 RPDKLVVIDT--EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFG   86 (337)
T ss_dssp             TTTEEEEEET--TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTC
T ss_pred             CCCeEEEEEC--CCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccc
Confidence            3344444443  34555666653 322 47899999999755 56667899999999999888777632     126778


Q ss_pred             EEEeeCCCEEEEEe------------CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcE
Q psy11015        228 VRFLPNKDLVLSAS------------GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVV  295 (360)
Q Consensus       228 i~~~p~~~~l~s~s------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v  295 (360)
                      ++|+|+|+++++++            .++.|.+||+.++...                            ..+.. ...+
T Consensus        87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~----------------------------~~~~~-~~~~  137 (337)
T 1pby_B           87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR----------------------------KAFEA-PRQI  137 (337)
T ss_dssp             EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE----------------------------EEEEC-CSSC
T ss_pred             eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE----------------------------EEEeC-CCCc
Confidence            99999999888886            6799999999876332                            22222 2345


Q ss_pred             EEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        296 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       296 ~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      .+++|+|+|++++++  ++.|.+||+.+++.+..+.
T Consensus       138 ~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~  171 (337)
T 1pby_B          138 TMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKP  171 (337)
T ss_dssp             CCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEEC
T ss_pred             ceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeee
Confidence            667788888777666  5778888877776655543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.48  E-value=6.7e-13  Score=131.80  Aligned_cols=143  Identities=14%  Similarity=0.145  Sum_probs=111.2

Q ss_pred             EEEEEECCCCCEEEEEe---------------------------------CCCcEEEEECCCCeEEEEEe--CCCcCeEE
Q psy11015        183 VWDVAVRPGQPVLGSAS---------------------------------ADRTVRLWSTQTGKCVLQYS--GHSGSVNS  227 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs---------------------------------~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~  227 (360)
                      +.+++|+|+|+.|++++                                 .+..|++||+.+++......  .|...+.+
T Consensus       183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~  262 (706)
T 2z3z_A          183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN  262 (706)
T ss_dssp             CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred             CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence            48899999999999988                                 44689999999987655442  46678999


Q ss_pred             EEEeeCCCEEEEEeCCC-----cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---CcEEEEE
Q psy11015        228 VRFLPNKDLVLSASGDK-----SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAAD  299 (360)
Q Consensus       228 i~~~p~~~~l~s~s~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~i~  299 (360)
                      ++|+|+|+.|++++.++     .|.+||+.++.....                         +.. ..+.   ..+.+++
T Consensus       263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~-------------------------~~~-~~~~~~~~~~~~~~  316 (706)
T 2z3z_A          263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT-------------------------LFV-ETDKHYVEPLHPLT  316 (706)
T ss_dssp             EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE-------------------------EEE-EECSSCCCCCSCCE
T ss_pred             EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE-------------------------EEE-ccCCCeECccCCce
Confidence            99999999999888776     899999987622111                         111 1111   1246789


Q ss_pred             EcC--CCCEEEEEECCCcEEEEECC-CCeEEEEEecCCCceEE-EEEcCCCCEEEc
Q psy11015        300 WLS--DGEQVITASWDRVANLFDVE-TGTILQSLTEPGEAIRA-AAGRTGGPIRAS  351 (360)
Q Consensus       300 ~sp--~g~~l~tgs~dg~i~iwd~~-~~~~~~~l~~h~~~v~~-~~~~~~g~~las  351 (360)
                      |+|  +|+++++++.||.++||++. ++..+..+..|...+.+ ++|+|+|..++.
T Consensus       317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~  372 (706)
T 2z3z_A          317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYF  372 (706)
T ss_dssp             ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEE
T ss_pred             eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEE
Confidence            999  99999999999999999876 67778888888888877 799999986643

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.46  E-value=1.9e-13  Score=136.04  Aligned_cols=139  Identities=17%  Similarity=0.113  Sum_probs=106.3

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc---CeEEEEEeeCCCEEEEEeC---------CCcEEEEEcc
Q psy11015        185 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPNKDLVLSASG---------DKSVHIWQAV  252 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~---~v~~i~~~p~~~~l~s~s~---------d~~i~vwd~~  252 (360)
                      +++|+|++.+++ .+.|++|++||+.++++...+.+|..   .+.+++|+|||++|++++.         +++|++||+.
T Consensus        20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~   98 (719)
T 1z68_A           20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS   98 (719)
T ss_dssp             CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence            678999995554 55699999999999998877775544   3899999999999998876         7899999998


Q ss_pred             cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE-e
Q psy11015        253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-T  331 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l-~  331 (360)
                      ++....                          ...+   ...+..++|||||++|+.++ |+.|++||+.+++..... .
T Consensus        99 ~g~~~~--------------------------~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~  148 (719)
T 1z68_A           99 NGEFVR--------------------------GNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN  148 (719)
T ss_dssp             TTEECC--------------------------SSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC
T ss_pred             CCcccc--------------------------ceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC
Confidence            773210                          0111   24578899999999999886 789999999988765432 2


Q ss_pred             cCCCce-----------------EEEEEcCCCCEEEcccc
Q psy11015        332 EPGEAI-----------------RAAAGRTGGPIRASPLL  354 (360)
Q Consensus       332 ~h~~~v-----------------~~~~~~~~g~~las~~~  354 (360)
                      ++...|                 .+++|+|||+.||++..
T Consensus       149 ~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~  188 (719)
T 1z68_A          149 GRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF  188 (719)
T ss_dssp             CBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred             CCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence            232222                 48999999999987663

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.45  E-value=5.1e-13  Score=133.59  Aligned_cols=140  Identities=11%  Similarity=0.060  Sum_probs=109.5

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC-----eEEEEEeeCCCEEEEEeCC---------CcEE
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-----VNSVRFLPNKDLVLSASGD---------KSVH  247 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~-----v~~i~~~p~~~~l~s~s~d---------~~i~  247 (360)
                      ...+++|+|++.+++++  |++|++||+.++++...+.+|...     ..++.|||||++|+.++.+         +.+.
T Consensus        18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~   95 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD   95 (740)
T ss_dssp             CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred             cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence            45688999999888886  999999999999988888877643     2447899999999998876         4567


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +||+.++.                             ...+..|...+..++|||||+.||.++ |+.|++||+.++...
T Consensus        96 ~~d~~~~~-----------------------------~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~  145 (740)
T 4a5s_A           96 IYDLNKRQ-----------------------------LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSY  145 (740)
T ss_dssp             EEETTTTE-----------------------------ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred             EEECCCCc-----------------------------EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceE
Confidence            99998772                             333556777899999999999998885 689999999888754


Q ss_pred             EE-EecCCCce-----------------EEEEEcCCCCEEEccc
Q psy11015        328 QS-LTEPGEAI-----------------RAAAGRTGGPIRASPL  353 (360)
Q Consensus       328 ~~-l~~h~~~v-----------------~~~~~~~~g~~las~~  353 (360)
                      +. ..++...+                 .+++|+|||+.||...
T Consensus       146 ~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~  189 (740)
T 4a5s_A          146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ  189 (740)
T ss_dssp             ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred             EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence            32 12232222                 3589999999888764

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.44  E-value=5.3e-12  Score=113.65  Aligned_cols=145  Identities=16%  Similarity=0.086  Sum_probs=104.0

Q ss_pred             CeEEEeeecCccceeeeeeeecCC-CCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCCC------cCeEEE
Q psy11015        157 SKIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHS------GSVNSV  228 (360)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h~------~~v~~i  228 (360)
                      ...+..|..  .+++.+..+..+. ..+..++|+|+++.+ ++++.++.|.+||+.+++.+..+..+.      ..+.++
T Consensus        20 ~~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~   97 (349)
T 1jmx_B           20 PNNLHVVDV--ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSF   97 (349)
T ss_dssp             TTEEEEEET--TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCE
T ss_pred             CCeEEEEEC--CCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccce
Confidence            344444443  4456666666543 257899999999855 566678999999999999888776332      237899


Q ss_pred             EEeeCCCEEEEEeCC------------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEE
Q psy11015        229 RFLPNKDLVLSASGD------------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI  296 (360)
Q Consensus       229 ~~~p~~~~l~s~s~d------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~  296 (360)
                      +|+|+|+++++++.+            +.|.+||+.++...                         ..+..+. +...+.
T Consensus        98 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-------------------------~~~~~~~-~~~~~~  151 (349)
T 1jmx_B           98 AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-------------------------KPVRTFP-MPRQVY  151 (349)
T ss_dssp             EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-------------------------CCSEEEE-CCSSCC
T ss_pred             EECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-------------------------ceeeecc-CCCccc
Confidence            999999999988865            89999999865211                         1223333 334688


Q ss_pred             EEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        297 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                      +++|+|+|+ +++++  +.|.+||..+++.+..+..
T Consensus       152 ~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~  184 (349)
T 1jmx_B          152 LMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPL  184 (349)
T ss_dssp             CEEECTTSC-EEEES--SSEEEECTTTCCEEEEECS
T ss_pred             ceeECCCCc-EEEcc--CcEEEEeCCCCceeccccc
Confidence            899999999 65554  4499999999988777653

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.43  E-value=8.9e-13  Score=118.78  Aligned_cols=139  Identities=7%  Similarity=0.057  Sum_probs=106.1

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-cCeEEEEEeeCCCEE-EEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015        185 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWECLVSNN  262 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~~~~~~~~~~  262 (360)
                      .+++++++.++++++.+++|++||+.+++.+..+..+. ..+..++|+|+|+.+ +++..++.|.+||+.++....    
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~----   79 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF----   79 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE----
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE----
Confidence            45678888899999999999999999999888887543 257899999999865 455678999999998774332    


Q ss_pred             CCCCCCCCCCCCCCCccccccceeEee-CC-----CCcEEEEEEcCCCCEEEEEECC------------CcEEEEECCCC
Q psy11015        263 DNDSDLDESKEPDESSITLRTPVKELL-GH-----SNVVIAADWLSDGEQVITASWD------------RVANLFDVETG  324 (360)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h-----~~~v~~i~~sp~g~~l~tgs~d------------g~i~iwd~~~~  324 (360)
                                              .+. ++     ...+.+++|+|+|+++++++.+            +.|.+||+.++
T Consensus        80 ------------------------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~  135 (349)
T 1jmx_B           80 ------------------------HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG  135 (349)
T ss_dssp             ------------------------EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred             ------------------------EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence                                    222 11     2236789999999999998865            89999999884


Q ss_pred             e---EEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        325 T---ILQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       325 ~---~~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                      +   .+..+..+ ..+.+++|+|+|.+++++
T Consensus       136 ~~~~~~~~~~~~-~~~~~~~~s~dg~l~~~~  165 (349)
T 1jmx_B          136 LEAKPVRTFPMP-RQVYLMRAADDGSLYVAG  165 (349)
T ss_dssp             GGBCCSEEEECC-SSCCCEEECTTSCEEEES
T ss_pred             cccceeeeccCC-CcccceeECCCCcEEEcc
Confidence            3   34445443 468899999999966543

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.41  E-value=4.4e-11  Score=105.02  Aligned_cols=159  Identities=14%  Similarity=0.169  Sum_probs=120.3

Q ss_pred             ceeeeeeee-cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        169 SCYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       169 ~~~~~~~l~-~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      .+..+..+. ++...+.+++++|++.++++.+.++.|.+||.. ++.+..+.  ++...+.+++++|+|+++++.+.++.
T Consensus       108 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~  186 (286)
T 1q7f_A          108 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC  186 (286)
T ss_dssp             TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred             CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCE
Confidence            344555553 345678999999999988888889999999964 66666664  34567899999999998888888999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCC-cEEEEECC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDR-VANLFDVE  322 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg-~i~iwd~~  322 (360)
                      |.+||....                             .+..+.  ++...+.+++++|+|+++++...++ .|.+||. 
T Consensus       187 i~~~~~~g~-----------------------------~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-  236 (286)
T 1q7f_A          187 VKVFNYEGQ-----------------------------YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-  236 (286)
T ss_dssp             EEEEETTCC-----------------------------EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-
T ss_pred             EEEEcCCCC-----------------------------EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-
Confidence            999997432                             122232  2235788999999999888887776 9999995 


Q ss_pred             CCeEEEEEecCCC--ceEEEEEcCCCCEEEcccccchh
Q psy11015        323 TGTILQSLTEPGE--AIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       323 ~~~~~~~l~~h~~--~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      +++.+..+..+..  .+.+++++|+|.++++..+..|+
T Consensus       237 ~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~  274 (286)
T 1q7f_A          237 DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLY  274 (286)
T ss_dssp             TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEE
T ss_pred             CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEE
Confidence            5777777765433  47899999999988887666553

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.40  E-value=5.3e-12  Score=115.34  Aligned_cols=149  Identities=11%  Similarity=0.015  Sum_probs=106.9

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEEEEEeC-CCcCeEEEEEeeCCCE--EEEEe-------------
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCVLQYSG-HSGSVNSVRFLPNKDL--VLSAS-------------  241 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~-~~~~~~~~~~-h~~~v~~i~~~p~~~~--l~s~s-------------  241 (360)
                      +...+..++|+|++++|++++.+ .|.+|++. +++....... ..+.+.+++|+|+|++  +++++             
T Consensus        38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~  116 (365)
T 1jof_A           38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK  116 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred             CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence            44568899999999999999988 99999997 7876544321 1133567899999994  45553             


Q ss_pred             CCCcEEEEEccc-CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC-CCcEEE
Q psy11015        242 GDKSVHIWQAVI-NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW-DRVANL  318 (360)
Q Consensus       242 ~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~-dg~i~i  318 (360)
                      .++++.+|++.. +....                         .+..+. .+...+.+++|+|+|+++++++. ++.|++
T Consensus       117 ~~g~v~v~~~~~~g~~~~-------------------------~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~  171 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLEK-------------------------NVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWT  171 (365)
T ss_dssp             SCCEEEEEEECTTCCEEE-------------------------EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             CCceEEEEccCCCCcCcc-------------------------eEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEE
Confidence            689999999863 31110                         111111 24567899999999999887764 689999


Q ss_pred             EECC-CCeEE--EEEe--cCCCceEEEEEcCCCCEEEccc
Q psy11015        319 FDVE-TGTIL--QSLT--EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       319 wd~~-~~~~~--~~l~--~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ||+. +++..  ..+.  .|...+..++|+|+|++++.+.
T Consensus       172 ~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~  211 (365)
T 1jof_A          172 HRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM  211 (365)
T ss_dssp             EEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE
T ss_pred             EEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEE
Confidence            9998 77653  3343  2456799999999998776543

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.40  E-value=1e-11  Score=113.49  Aligned_cols=135  Identities=9%  Similarity=-0.055  Sum_probs=110.3

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      .+.+ |+.|+|  ++..|+++ .++.|++||+.+.........|...+.++.+.+.  .+++++.||.+.+||+..+.. 
T Consensus        86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~-  158 (388)
T 1xip_A           86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST-  158 (388)
T ss_dssp             ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE-
T ss_pred             eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc-
Confidence            4666 999999  88899998 8899999999877656666678888988887654  388899999999999986521 


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE--EEEE-----
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI--LQSL-----  330 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~--~~~l-----  330 (360)
                                                 . .   +...|++++|+|+|  ++.|..||++++|+...+..  ..++     
T Consensus       159 ---------------------------~-~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~  205 (388)
T 1xip_A          159 ---------------------------K-Q---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSE  205 (388)
T ss_dssp             ---------------------------E-E---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHH
T ss_pred             ---------------------------c-c---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcc
Confidence                                       1 1   34589999999999  77899999999999887775  5666     


Q ss_pred             -e---cCCCceEEEEEcCCCCEEEcc
Q psy11015        331 -T---EPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       331 -~---~h~~~v~~~~~~~~g~~las~  352 (360)
                       .   +|...|.++.|.+++.++++-
T Consensus       206 ~~~~~~~~~~V~sI~wl~~~~flv~y  231 (388)
T 1xip_A          206 LEELPVEEYSPLSVTILSPQDFLAVF  231 (388)
T ss_dssp             HHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             cccccCCCeeEEEEEEecCCeEEEEE
Confidence             2   367899999999999998853

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.38  E-value=7e-11  Score=107.37  Aligned_cols=181  Identities=9%  Similarity=0.018  Sum_probs=113.7

Q ss_pred             cCCeEEEeeecCccce--eeeeeeecCCCCEEEEEECCCCCEEEEEeCC----CcEEEEECCC--Ce--EEEEEeCCCcC
Q psy11015        155 QTSKIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPGQPVLGSASAD----RTVRLWSTQT--GK--CVLQYSGHSGS  224 (360)
Q Consensus       155 ~~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D----g~v~iwd~~~--~~--~~~~~~~h~~~  224 (360)
                      ..+.-+..|..+..++  ..+..+  |...+..++|+|++++|++++.+    +.|.+|++..  +.  .+.....+...
T Consensus        24 ~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~  101 (361)
T 3scy_A           24 GNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD  101 (361)
T ss_dssp             SSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred             CCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence            3344555565544444  334444  77788899999999999999886    7999998865  53  34444545667


Q ss_pred             eEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC
Q psy11015        225 VNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  303 (360)
Q Consensus       225 v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~  303 (360)
                      +..+++  +++++++++ .++.+.+|++............       ...       ..........+...+.+++|+|+
T Consensus       102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~-------~~~-------~g~~~~~~~~~~~~~~~~~~spd  165 (361)
T 3scy_A          102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDV-------IEF-------KGSGPDKERQTMPHLHCVRITPD  165 (361)
T ss_dssp             EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE-------EEC-------CCCCSCTTTCSSCCEEEEEECTT
T ss_pred             cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCccccee-------EEc-------cCCCCCccccCCCcceEEEECCC
Confidence            788888  788777766 6789999998754221100000       000       00000000112345788999999


Q ss_pred             CCEEEEEE-CCCcEEEEECCCCe-------E------EEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        304 GEQVITAS-WDRVANLFDVETGT-------I------LQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       304 g~~l~tgs-~dg~i~iwd~~~~~-------~------~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      |+++++++ .++.|.+|++....       .      ......+...+.+++|+|+|++++.+.
T Consensus       166 g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~  229 (361)
T 3scy_A          166 GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN  229 (361)
T ss_dssp             SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred             CCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc
Confidence            99776665 47899999876433       1      111223456688999999998665443

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.37  E-value=1.3e-11  Score=113.24  Aligned_cols=157  Identities=11%  Similarity=-0.044  Sum_probs=119.2

Q ss_pred             cceeeeeeeecCCCCEEE-----EEECCCCCEEEEEeC-CC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEE
Q psy11015        168 LSCYKIRSFSGHRDGVWD-----VAVRPGQPVLGSASA-DR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS  239 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~-----l~~~~~~~~l~sgs~-Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s  239 (360)
                      .++..+..+..|......     .+|+|+|+.|+.++. +|  .|.+||+.+++......++...+..+.|+|+|+.|+.
T Consensus        18 ~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~   97 (388)
T 3pe7_A           18 STGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFY   97 (388)
T ss_dssp             TTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEE
T ss_pred             CCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEE
Confidence            456667778888877766     889999998888887 66  4888999999887777767666667889999999999


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEE--EcCCCCEEEEE-------
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD--WLSDGEQVITA-------  310 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~--~sp~g~~l~tg-------  310 (360)
                      ++.++.+.+||+.++...                            .....+...+....  ++|+|.+++..       
T Consensus        98 ~~~~~~l~~~d~~~g~~~----------------------------~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~  149 (388)
T 3pe7_A           98 VKDGRNLMRVDLATLEEN----------------------------VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDW  149 (388)
T ss_dssp             EETTTEEEEEETTTCCEE----------------------------EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred             EeCCCeEEEEECCCCcce----------------------------eeeechhhcccccceeECCCCCeeccccccCccc
Confidence            999999999999877332                            22333444454444  48999988743       


Q ss_pred             ---------------ECCCcEEEEECCCCeEEEEEecCCCceEEEEEcC-CCCEEEccc
Q psy11015        311 ---------------SWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT-GGPIRASPL  353 (360)
Q Consensus       311 ---------------s~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~-~g~~las~~  353 (360)
                                     +.++.|.+||+.+++.. .+..+...+..++|+| +|..++...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~  207 (388)
T 3pe7_A          150 VPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCH  207 (388)
T ss_dssp             CCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred             ccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEE
Confidence                           24477999999998754 4445667799999999 998777544

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.37  E-value=6.4e-11  Score=108.08  Aligned_cols=146  Identities=10%  Similarity=-0.009  Sum_probs=103.6

Q ss_pred             CEEEEEECCCCCE--EEEEe-------------CCCcEEEEECC-CCeEEEEEe----CCCcCeEEEEEeeCCCEEEEEe
Q psy11015        182 GVWDVAVRPGQPV--LGSAS-------------ADRTVRLWSTQ-TGKCVLQYS----GHSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       182 ~V~~l~~~~~~~~--l~sgs-------------~Dg~v~iwd~~-~~~~~~~~~----~h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      .+.+++|+|+++.  +++++             .+|++.+|++. .++....+.    .+...+.+++|+|+|+++++++
T Consensus        84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~  163 (365)
T 1jof_A           84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD  163 (365)
T ss_dssp             SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred             CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence            3566899999984  55553             68999999997 465544443    2456799999999999887765


Q ss_pred             -CCCcEEEEEcc-cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEEC-CCcE
Q psy11015        242 -GDKSVHIWQAV-INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASW-DRVA  316 (360)
Q Consensus       242 -~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~-dg~i  316 (360)
                       .++.|.+||+. ++...                          .+..+.  .|...+.+++|+|+|+++++++. ++.+
T Consensus       164 ~~~~~v~~~~~~~~g~~~--------------------------~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v  217 (365)
T 1jof_A          164 LTANKLWTHRKLASGEVE--------------------------LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRI  217 (365)
T ss_dssp             TTTTEEEEEEECTTSCEE--------------------------EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred             CCCCEEEEEEECCCCCEE--------------------------EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeE
Confidence             46899999987 55221                          122232  24567899999999999988775 6899


Q ss_pred             EEEECC--CCeEE---EEEec-------CCC------ceEEEE-EcCCCCEEEccc
Q psy11015        317 NLFDVE--TGTIL---QSLTE-------PGE------AIRAAA-GRTGGPIRASPL  353 (360)
Q Consensus       317 ~iwd~~--~~~~~---~~l~~-------h~~------~v~~~~-~~~~g~~las~~  353 (360)
                      .+|++.  +|+..   ..+..       |..      .+.+++ |+|+|++++++.
T Consensus       218 ~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~  273 (365)
T 1jof_A          218 CEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             EEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             EEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence            999765  56542   22321       121      488999 999999776543

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.36  E-value=2.1e-12  Score=129.19  Aligned_cols=166  Identities=8%  Similarity=-0.028  Sum_probs=115.1

Q ss_pred             CccceeeeeeeecCCCC-----EEEEEECCCCCEEEEEeCC---------CcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015        166 SLLSCYKIRSFSGHRDG-----VWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~-----V~~l~~~~~~~~l~sgs~D---------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~  231 (360)
                      +..++.+...+.+|...     ...++|+|||+.|+.++.+         +.+.+||+.++++. .+..|.+.+..++||
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~S  120 (740)
T 4a5s_A           42 NAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWS  120 (740)
T ss_dssp             ETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEEC
T ss_pred             ECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEEC
Confidence            33445556667777643     2447899999999999887         55679999999854 466678889999999


Q ss_pred             eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC---------cEEEEEEcC
Q psy11015        232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN---------VVIAADWLS  302 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~i~~sp  302 (360)
                      |||+.|+.+ .|+.|.+|++.++........                   ......+.++..         ...++.|||
T Consensus       121 PdG~~la~~-~~~~i~~~~~~~~~~~~lt~~-------------------g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp  180 (740)
T 4a5s_A          121 PVGHKLAYV-WNNDIYVKIEPNLPSYRITWT-------------------GKEDIIYNGITDWVYEEEVFSAYSALWWSP  180 (740)
T ss_dssp             SSTTCEEEE-ETTEEEEESSTTSCCEECCSC-------------------CBTTTEEESBCCHHHHHHTSSSSBCEEECT
T ss_pred             CCCCEEEEE-ECCeEEEEECCCCceEEEcCC-------------------CCccceecCcccccccchhcCCCcceEECC
Confidence            999999887 468999999887643321000                   001112223332         223589999


Q ss_pred             CCCEEEEEECCC------------------------------------cEEEEECCC---Ce--EEEEEe------cCCC
Q psy11015        303 DGEQVITASWDR------------------------------------VANLFDVET---GT--ILQSLT------EPGE  335 (360)
Q Consensus       303 ~g~~l~tgs~dg------------------------------------~i~iwd~~~---~~--~~~~l~------~h~~  335 (360)
                      ||++|+.++.|.                                    .|++||+.+   +.  ....+.      +|..
T Consensus       181 Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~  260 (740)
T 4a5s_A          181 NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDH  260 (740)
T ss_dssp             TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCE
T ss_pred             CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCe
Confidence            999998876332                                    488899988   73  223343      2777


Q ss_pred             ceEEEEEcCCCCEEEcc
Q psy11015        336 AIRAAAGRTGGPIRASP  352 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~  352 (360)
                      .+..++|+|+|++++..
T Consensus       261 ~~~~~~wspdg~~~~~~  277 (740)
T 4a5s_A          261 YLCDVTWATQERISLQW  277 (740)
T ss_dssp             EEEEEEEEETTEEEEEE
T ss_pred             EEEEEEEeCCCeEEEEE
Confidence            89999999999966543

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.35  E-value=2.4e-11  Score=111.35  Aligned_cols=160  Identities=9%  Similarity=-0.014  Sum_probs=118.3

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE--eeCCCEEEE
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF--LPNKDLVLS  239 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~--~p~~~~l~s  239 (360)
                      +|.++..++.......+|...+.+++|+|+++.|+.++.++.|++||+.+++....+..+.+.+....|  +|++.+++.
T Consensus        62 l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~  141 (388)
T 3pe7_A           62 YYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVG  141 (388)
T ss_dssp             EEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred             EEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeecc
Confidence            344455566666666777777777889999999999999999999999999887777766666655544  789988874


Q ss_pred             E----------------------eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEE
Q psy11015        240 A----------------------SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA  297 (360)
Q Consensus       240 ~----------------------s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~  297 (360)
                      .                      +.+..|.+||+.++                             ....+..+...+..
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g-----------------------------~~~~l~~~~~~~~~  192 (388)
T 3pe7_A          142 IEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG-----------------------------ESTVILQENQWLGH  192 (388)
T ss_dssp             EEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC-----------------------------CEEEEEEESSCEEE
T ss_pred             ccccCcccccccccchhhhhhccCCcceEEEEECCCC-----------------------------ceEEeecCCccccc
Confidence            3                      24467889998876                             23344456677899


Q ss_pred             EEEcC-CCCEEEEEECC------CcEEEEECCCCeEEEEEecCC--CceEEEEEcCCCCEEEc
Q psy11015        298 ADWLS-DGEQVITASWD------RVANLFDVETGTILQSLTEPG--EAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       298 i~~sp-~g~~l~tgs~d------g~i~iwd~~~~~~~~~l~~h~--~~v~~~~~~~~g~~las  351 (360)
                      ++|+| +|++|+.++.+      ..|.++|...+. ...+..+.  ..+..++|+|+|+.++.
T Consensus       193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~  254 (388)
T 3pe7_A          193 PIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVY  254 (388)
T ss_dssp             EEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred             cEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEE
Confidence            99999 99999877753      378888876554 34444443  35788999999996654

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.34  E-value=5.8e-12  Score=124.08  Aligned_cols=156  Identities=15%  Similarity=0.095  Sum_probs=114.4

Q ss_pred             eeeeec-----CCCCEEEEEECCCCCEEEEEeCC----------CcEEEEECCC------CeEEEEEe-CCCcCeEEEEE
Q psy11015        173 IRSFSG-----HRDGVWDVAVRPGQPVLGSASAD----------RTVRLWSTQT------GKCVLQYS-GHSGSVNSVRF  230 (360)
Q Consensus       173 ~~~l~~-----h~~~V~~l~~~~~~~~l~sgs~D----------g~v~iwd~~~------~~~~~~~~-~h~~~v~~i~~  230 (360)
                      .+.+..     |...+.+++|+|+|+.|++++.|          ..|++||+.+      +.. ..+. .+...+..++|
T Consensus       117 ~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~  195 (662)
T 3azo_A          117 PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRL  195 (662)
T ss_dssp             CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEE
T ss_pred             CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceE
Confidence            445555     67789999999999999999887          5899999988      554 4454 56678889999


Q ss_pred             eeCCCEEEEEeCCC--------cEEEEEcc-cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        231 LPNKDLVLSASGDK--------SVHIWQAV-INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       231 ~p~~~~l~s~s~d~--------~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      +|||+.|+.++.++        .|.+||+. ++...                         .......+|...+..++|+
T Consensus       196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~-------------------------~~~~l~~~~~~~~~~~~~s  250 (662)
T 3azo_A          196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFA-------------------------DTRTLLGGPEEAIAQAEWA  250 (662)
T ss_dssp             CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEE-------------------------EEEEEEEETTBCEEEEEEC
T ss_pred             CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccc-------------------------ccEEeCCCCCceEcceEEC
Confidence            99999998877553        79999987 34100                         1122233457789999999


Q ss_pred             CCCCEEEEEECCC--cEEEEECCCCeEEEEEecCCCc--------eEEEEEcCCCCEEEcccc
Q psy11015        302 SDGEQVITASWDR--VANLFDVETGTILQSLTEPGEA--------IRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       302 p~g~~l~tgs~dg--~i~iwd~~~~~~~~~l~~h~~~--------v~~~~~~~~g~~las~~~  354 (360)
                      |||+++++++.+|  .|.+||+.+++.......+...        +.+++|+|++.+++++..
T Consensus       251 pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~  313 (662)
T 3azo_A          251 PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK  313 (662)
T ss_dssp             TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred             CCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence            9999888888888  5666777677654433333222        567889999999888754

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.33  E-value=1.1e-11  Score=122.07  Aligned_cols=153  Identities=18%  Similarity=0.119  Sum_probs=111.4

Q ss_pred             eeeeecCCCCEE---------EEEEC--CCCCE-EEEEeC-CCcEEEEECC--CCeEEEEEeC-----CCcCeEEEEEee
Q psy11015        173 IRSFSGHRDGVW---------DVAVR--PGQPV-LGSASA-DRTVRLWSTQ--TGKCVLQYSG-----HSGSVNSVRFLP  232 (360)
Q Consensus       173 ~~~l~~h~~~V~---------~l~~~--~~~~~-l~sgs~-Dg~v~iwd~~--~~~~~~~~~~-----h~~~v~~i~~~p  232 (360)
                      .+.+.+|...+.         ...|+  |||+. |+.++. +..|.+|++.  .......+..     |...+.+++|+|
T Consensus        60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp  139 (662)
T 3azo_A           60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP  139 (662)
T ss_dssp             EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET
T ss_pred             cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC
Confidence            456666766655         55554  99987 665554 5667777765  2033455555     667889999999


Q ss_pred             CCCEEEEEeCC----------CcEEEEEccc------CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcE
Q psy11015        233 NKDLVLSASGD----------KSVHIWQAVI------NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVV  295 (360)
Q Consensus       233 ~~~~l~s~s~d----------~~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v  295 (360)
                      ||+.|++++.|          ..|.+||+.+      +                             ....+. .+...+
T Consensus       140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------------~~~~l~~~~~~~~  190 (662)
T 3azo_A          140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS-----------------------------AVRELSDDAHRFV  190 (662)
T ss_dssp             TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG-----------------------------GSEESSCSCSSEE
T ss_pred             CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC-----------------------------ceeEEEecCCCcc
Confidence            99999988877          5799999876      3                             223344 555678


Q ss_pred             EEEEEcCCCCEEEEEECCC--------cEEEEECC-CC---eEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        296 IAADWLSDGEQVITASWDR--------VANLFDVE-TG---TILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       296 ~~i~~sp~g~~l~tgs~dg--------~i~iwd~~-~~---~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      .+++|+|||++|+.++.++        .|++||+. ++   .......+|...+..++|+|+|++++++..
T Consensus       191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~  261 (662)
T 3azo_A          191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR  261 (662)
T ss_dssp             CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT
T ss_pred             cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC
Confidence            8899999999999887553        79999998 57   444444556788999999999997776653

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.30  E-value=2e-10  Score=104.81  Aligned_cols=184  Identities=7%  Similarity=-0.069  Sum_probs=121.8

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC------CcCeEEEEE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH------SGSVNSVRF  230 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h------~~~v~~i~~  230 (360)
                      ..+++.+.++..+..+  .++|+|+++++++++          .+++|.+||..+++.+..+...      ......++|
T Consensus        38 ~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~  115 (361)
T 2oiz_A           38 YTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQ  115 (361)
T ss_dssp             TTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEE
T ss_pred             CCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEE
Confidence            3456667777777665  899999999988886          3678999999999888887632      245678999


Q ss_pred             eeCCCEEEEEeC--CCcEEEEEcccCeeEee-eCCCCC------CCC-----------CC--CCCCCCCccc--------
Q psy11015        231 LPNKDLVLSASG--DKSVHIWQAVINWECLV-SNNDND------SDL-----------DE--SKEPDESSIT--------  280 (360)
Q Consensus       231 ~p~~~~l~s~s~--d~~i~vwd~~~~~~~~~-~~~~~~------~~~-----------~~--~~~~~~~~~~--------  280 (360)
                      +|+|++++++..  +++|.+||+.++..... +.....      +..           ..  ..........        
T Consensus       116 spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~  195 (361)
T 2oiz_A          116 TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQM  195 (361)
T ss_dssp             CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCC
T ss_pred             CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccce
Confidence            999999988864  68999999988866544 221110      000           00  0000000000        


Q ss_pred             -----------------------cccceeEeeCCC-----------------------CcEEEEEEcCCCCEEEEEEC--
Q psy11015        281 -----------------------LRTPVKELLGHS-----------------------NVVIAADWLSDGEQVITASW--  312 (360)
Q Consensus       281 -----------------------~~~~~~~~~~h~-----------------------~~v~~i~~sp~g~~l~tgs~--  312 (360)
                                             ....+..+....                       .....++|+|++++++++..  
T Consensus       196 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~  275 (361)
T 2oiz_A          196 FSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPD  275 (361)
T ss_dssp             SCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESS
T ss_pred             EcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccC
Confidence                                   000011111000                       00112688999888876543  


Q ss_pred             ---------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        313 ---------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       313 ---------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                               .+.|.+||+.+++.+.++..+.  +.+++|+|+|++++++..
T Consensus       276 ~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~  324 (361)
T 2oiz_A          276 GKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG  324 (361)
T ss_dssp             CCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred             CCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC
Confidence                     3479999999999999998876  899999999998887764

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.29  E-value=1.4e-10  Score=102.48  Aligned_cols=179  Identities=13%  Similarity=0.076  Sum_probs=123.4

Q ss_pred             eeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      .+..+..+.....+++|+|+++ +++++..++.|..||..++  ...+..+...+.+++++|+|+++++...++.|.+||
T Consensus        19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d   96 (296)
T 3e5z_A           19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR   96 (296)
T ss_dssp             CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred             cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence            3445556667788999999998 8889999999999999887  667777788899999999999888777788999999


Q ss_pred             cccCeeEeeeCCCCC----CCCCCCCCCCC-----------------------------CccccccceeEeeCCCCcEEE
Q psy11015        251 AVINWECLVSNNDND----SDLDESKEPDE-----------------------------SSITLRTPVKELLGHSNVVIA  297 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~----~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~h~~~v~~  297 (360)
                      ..++...........    ........+..                             ...........+..+...+.+
T Consensus        97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~g  176 (296)
T 3e5z_A           97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNG  176 (296)
T ss_dssp             STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEE
T ss_pred             CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCcc
Confidence            977654322111000    00000000000                             000001122334455567789


Q ss_pred             EEEcCCCCEEEEEECCCcEEEEECC-CCeE---EEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        298 ADWLSDGEQVITASWDRVANLFDVE-TGTI---LQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       298 i~~sp~g~~l~tgs~dg~i~iwd~~-~~~~---~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                      ++|+|+|+.+++.+.++.|.+||+. ++..   ...+..+...+.+++++++|++.++.
T Consensus       177 i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~  235 (296)
T 3e5z_A          177 LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA  235 (296)
T ss_dssp             EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred             EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc
Confidence            9999999999777888999999986 5554   33443345567789999999977766

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.25  E-value=6.4e-10  Score=99.99  Aligned_cols=146  Identities=10%  Similarity=0.018  Sum_probs=112.8

Q ss_pred             CCCEEEEEECCCCCEEEEEeCC------------------------CcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCC
Q psy11015        180 RDGVWDVAVRPGQPVLGSASAD------------------------RTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNK  234 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~D------------------------g~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~  234 (360)
                      -+.+.+++++|+|+++++.+.+                        ++|.+||..+++.+..+. ++-..+..++++|+|
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g  102 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG  102 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence            4679999999999999888877                        479999999998877665 444678999999999


Q ss_pred             CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe---------eCCCCcEEEEEEcC-CC
Q psy11015        235 DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL---------LGHSNVVIAADWLS-DG  304 (360)
Q Consensus       235 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~i~~sp-~g  304 (360)
                      +++++...++.|++||......                           .+..+         .++-..+..++++| +|
T Consensus       103 ~l~v~d~~~~~v~~~~~~g~~~---------------------------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g  155 (329)
T 3fvz_A          103 NYWVTDVALHQVFKLDPHSKEG---------------------------PLLILGRSMQPGSDQNHFCQPTDVAVEPSTG  155 (329)
T ss_dssp             CEEEEETTTTEEEEECTTCSSC---------------------------CSEEESBTTBCCCSTTCCSSEEEEEECTTTC
T ss_pred             CEEEEECCCCEEEEEeCCCCeE---------------------------EEEEecccCCCCCCccccCCCcEEEEeCCCC
Confidence            9888888899999999753310                           11111         23445788999999 78


Q ss_pred             CEEEEEE-CCCcEEEEECCCCeEEEEEecCC----------CceEEEEEcCC-CCEEEccc
Q psy11015        305 EQVITAS-WDRVANLFDVETGTILQSLTEPG----------EAIRAAAGRTG-GPIRASPL  353 (360)
Q Consensus       305 ~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~----------~~v~~~~~~~~-g~~las~~  353 (360)
                      ..+++.+ .++.|++|| .+|..+..+....          .....++++|+ |.++++..
T Consensus       156 ~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~  215 (329)
T 3fvz_A          156 AVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR  215 (329)
T ss_dssp             CEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred             eEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence            8888886 689999999 6688777775322          23789999998 77766654

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.22  E-value=2.4e-09  Score=95.95  Aligned_cols=150  Identities=8%  Similarity=-0.046  Sum_probs=110.8

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC----CcE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----KSV  246 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d----~~i  246 (360)
                      .....+.++...+.+++|++++.+++++..++.|.+||..+++.......+...+.+++|+|+|+++++...+    +.|
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i  114 (333)
T 2dg1_A           35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGI  114 (333)
T ss_dssp             EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred             ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence            4455667777888999999999988889999999999999887665554567789999999999988877766    689


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEEC------CCcEEE
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASW------DRVANL  318 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~------dg~i~i  318 (360)
                      .+||..++...                            ..+.  .+...+..++++|+|+.+++...      .+.|..
T Consensus       115 ~~~d~~~~~~~----------------------------~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~  166 (333)
T 2dg1_A          115 FAATENGDNLQ----------------------------DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYY  166 (333)
T ss_dssp             EEECTTSCSCE----------------------------EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEE
T ss_pred             EEEeCCCCEEE----------------------------EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEE
Confidence            99998765221                            0111  23457899999999988876654      355677


Q ss_pred             EECCCCeEEEEEecCCCceEEEEEcCCCCEE
Q psy11015        319 FDVETGTILQSLTEPGEAIRAAAGRTGGPIR  349 (360)
Q Consensus       319 wd~~~~~~~~~l~~h~~~v~~~~~~~~g~~l  349 (360)
                      ||..+++... +..+...+..++|+|+|..+
T Consensus       167 ~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l  196 (333)
T 2dg1_A          167 VSPDFRTVTP-IIQNISVANGIALSTDEKVL  196 (333)
T ss_dssp             ECTTSCCEEE-EEEEESSEEEEEECTTSSEE
T ss_pred             EeCCCCEEEE-eecCCCcccceEECCCCCEE
Confidence            7766555433 32333457899999999743

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.22  E-value=3.7e-10  Score=101.51  Aligned_cols=146  Identities=16%  Similarity=0.229  Sum_probs=110.9

Q ss_pred             cCCCCEEEEEECC-CCCEEEEEe-CCCcEEEEECCCCeEEEEEeC----------CCcCeEEEEEeeC-CCEEEEEeCCC
Q psy11015        178 GHRDGVWDVAVRP-GQPVLGSAS-ADRTVRLWSTQTGKCVLQYSG----------HSGSVNSVRFLPN-KDLVLSASGDK  244 (360)
Q Consensus       178 ~h~~~V~~l~~~~-~~~~l~sgs-~Dg~v~iwd~~~~~~~~~~~~----------h~~~v~~i~~~p~-~~~l~s~s~d~  244 (360)
                      ++....+.++++| ++.++++.+ .++.|++|+ ..+..+..+..          +-.....|+++|+ +.++++...++
T Consensus       140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~  218 (329)
T 3fvz_A          140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG  218 (329)
T ss_dssp             TCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT
T ss_pred             cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC
Confidence            4556789999999 788888886 699999999 56777776642          2234899999998 77788888899


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe--eCCCCcEEEEEEcCCCCEEEE-------EECCCc
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVIT-------ASWDRV  315 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~i~~sp~g~~l~t-------gs~dg~  315 (360)
                      .|++||..++..                            +..+  ..+...+.+++|+| |..+++       .+.+..
T Consensus       219 ~I~~~~~~~G~~----------------------------~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~  269 (329)
T 3fvz_A          219 RIQCFKTDTKEF----------------------------VREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQ  269 (329)
T ss_dssp             EEEEEETTTCCE----------------------------EEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCC
T ss_pred             EEEEEECCCCcE----------------------------EEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcE
Confidence            999999876632                            2233  24556788899999 433333       334558


Q ss_pred             EEEEECCCCeEEEEEe---cCCCceEEEEEcCCCCEEEccc
Q psy11015        316 ANLFDVETGTILQSLT---EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       316 i~iwd~~~~~~~~~l~---~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +++||..+++.+..+.   .+-..+.+++++|+|.++++..
T Consensus       270 v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~  310 (329)
T 3fvz_A          270 GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA  310 (329)
T ss_dssp             EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES
T ss_pred             EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC
Confidence            9999999999998884   5667789999999998777654

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.22  E-value=1.6e-10  Score=114.91  Aligned_cols=147  Identities=9%  Similarity=-0.010  Sum_probs=105.9

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc-------
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADR-----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-------  245 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg-----~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~-------  245 (360)
                      +|...+.+++|+|||+.|+.++.++     +|++||+.+++.+.....+ ..+.+++|+|||+.|+.++.++.       
T Consensus       122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~  200 (710)
T 2xdw_A          122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT  200 (710)
T ss_dssp             TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred             CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence            3555688999999999888776543     8999999999876643322 23678999999999999888776       


Q ss_pred             ---------EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC----
Q psy11015        246 ---------VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW----  312 (360)
Q Consensus       246 ---------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~----  312 (360)
                               |++|++.++....                        ..+.....|...+.++.|+|+|++|+.++.    
T Consensus       201 ~~~~~~~~~v~~~~l~t~~~~~------------------------~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~  256 (710)
T 2xdw_A          201 ETSTNLHQKLYYHVLGTDQSED------------------------ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD  256 (710)
T ss_dssp             CCCCCCCCEEEEEETTSCGGGC------------------------EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred             ccccCCCCEEEEEECCCCcccc------------------------eEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence                     9999987652100                        012222235566889999999999987765    


Q ss_pred             -CCcEEEEECCC------Ce-EEEEEecCCCceEEEEEcCCCCEEE
Q psy11015        313 -DRVANLFDVET------GT-ILQSLTEPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       313 -dg~i~iwd~~~------~~-~~~~l~~h~~~v~~~~~~~~g~~la  350 (360)
                       +..|.+||+.+      +. ....+..+...+.. .|+|+|..++
T Consensus       257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~  301 (710)
T 2xdw_A          257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFT  301 (710)
T ss_dssp             SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEE
T ss_pred             CccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEE
Confidence             56899999976      43 35666666666655 4777776554

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.20  E-value=3.1e-09  Score=93.16  Aligned_cols=146  Identities=13%  Similarity=0.105  Sum_probs=110.6

Q ss_pred             cCCCCEEEEEE-CCCCCEEEEEeC-CCcEEEEECCCCeEEEEEeC-CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        178 GHRDGVWDVAV-RPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       178 ~h~~~V~~l~~-~~~~~~l~sgs~-Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      +|...+.++++ .+++.++++... ++.|.+|| .+++.+..+.. +...+.+++++|+|+++++...++.|.+||....
T Consensus        74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~  152 (286)
T 1q7f_A           74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN  152 (286)
T ss_dssp             TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred             ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC
Confidence            35567899999 577766666643 88999999 56777776643 3457899999999998888888899999985422


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                                                   .+..+.  ++...+.+++++|+|+.+++.+.++.|++||. .+..+..+..
T Consensus       153 -----------------------------~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~  202 (286)
T 1q7f_A          153 -----------------------------VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGG  202 (286)
T ss_dssp             -----------------------------EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESC
T ss_pred             -----------------------------EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEcc
Confidence                                         122222  34456899999999998888788999999997 5667777754


Q ss_pred             C--CCceEEEEEcCCCCEEEcccc
Q psy11015        333 P--GEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       333 h--~~~v~~~~~~~~g~~las~~~  354 (360)
                      +  -..+.+++++++|+++++...
T Consensus       203 ~g~~~~p~~i~~d~~G~l~v~~~~  226 (286)
T 1q7f_A          203 EGITNYPIGVGINSNGEILIADNH  226 (286)
T ss_dssp             TTTSCSEEEEEECTTCCEEEEECS
T ss_pred             CCccCCCcEEEECCCCCEEEEeCC
Confidence            4  357899999999998887653

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.19  E-value=1e-10  Score=106.84  Aligned_cols=136  Identities=10%  Similarity=0.026  Sum_probs=102.5

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-----------EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-----------~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      .++.+++++...++++|+.+ .+++|++...+           ..... .+.+ |+.++|  ++..|+++ .++.|++||
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d  112 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD  112 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence            68899999999999999998 45569865332           11223 3666 999999  88999988 889999999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  330 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l  330 (360)
                      +.+..                            .......|...+.++.+.+.  .+++++.||.|.+||+.++....  
T Consensus       113 v~sl~----------------------------~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~--  160 (388)
T 1xip_A          113 LEELS----------------------------EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ--  160 (388)
T ss_dssp             SSSTT----------------------------CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE--
T ss_pred             chhhh----------------------------ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc--
Confidence            87652                            12234456667888777654  38889999999999999887653  


Q ss_pred             ecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        331 TEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                        +...|++++|+|.| ..++..++.++
T Consensus       161 --~~~~Vs~v~WSpkG-~~vg~~dg~i~  185 (388)
T 1xip_A          161 --LAQNVTSFDVTNSQ-LAVLLKDRSFQ  185 (388)
T ss_dssp             --EEESEEEEEECSSE-EEEEETTSCEE
T ss_pred             --ccCCceEEEEcCCc-eEEEEcCCcEE
Confidence              34589999999999 55666666543

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.18  E-value=1.5e-09  Score=98.97  Aligned_cols=64  Identities=14%  Similarity=0.193  Sum_probs=55.3

Q ss_pred             cccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC--eEEEEEecCCCceEEEEEcCCCC
Q psy11015        281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG--TILQSLTEPGEAIRAAAGRTGGP  347 (360)
Q Consensus       281 ~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~--~~~~~l~~h~~~v~~~~~~~~g~  347 (360)
                      ..+.+..+..+.  +.+++|+|+|++|++++. +.|.+||..++  +.+.++..+......++++|+|.
T Consensus       295 t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          295 TKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             TTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             CCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            345667777666  899999999999998887 99999999999  99999877777889999999985

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.16  E-value=2.8e-10  Score=112.96  Aligned_cols=148  Identities=9%  Similarity=-0.015  Sum_probs=104.3

Q ss_pred             cCCCCEEEEEECCCCCEEE-----EEeCCCcEEEEECCCCeEEEEEeCCCcCe--EEEEEeeCCCEEEEEeCCCc-----
Q psy11015        178 GHRDGVWDVAVRPGQPVLG-----SASADRTVRLWSTQTGKCVLQYSGHSGSV--NSVRFLPNKDLVLSASGDKS-----  245 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~-----sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v--~~i~~~p~~~~l~s~s~d~~-----  245 (360)
                      +|...+.+++|+|||+.|+     +|+.+.+|++||+.+++.+.  ..+...+  ..++|+|||+.|+.++.|..     
T Consensus       118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~  195 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV  195 (695)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred             CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence            5666789999999999888     44556789999999987641  1122222  68999999999999998876     


Q ss_pred             --------EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC---
Q psy11015        246 --------VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR---  314 (360)
Q Consensus       246 --------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg---  314 (360)
                              |++|++.++...                        ...+.....|...+.++.|+|+|++|+.++.++   
T Consensus       196 ~~~~~~~~v~~~~l~t~~~~------------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~  251 (695)
T 2bkl_A          196 DERPGYTTIRYHTLGTEPSK------------------------DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSE  251 (695)
T ss_dssp             GGGGGGCEEEEEETTSCGGG------------------------CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTE
T ss_pred             ccCCCCCEEEEEECCCCchh------------------------ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCc
Confidence                    999998766211                        012233334566789999999999998877666   


Q ss_pred             -cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        315 -VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       315 -~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                       .|.+|+..++. ...+..+...+....|++++ +++++.
T Consensus       252 ~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~-l~~~s~  289 (695)
T 2bkl_A          252 NDVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDR-FYVLTD  289 (695)
T ss_dssp             EEEEEECTTCSS-CEEEEECSSCCEEEEEETTE-EEEEEC
T ss_pred             eEEEEEcCCCCc-eEEeecCCCceEEEEecCCc-EEEEEC
Confidence             67788766664 34455555566666675444 555443

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.13  E-value=1.7e-09  Score=97.36  Aligned_cols=133  Identities=12%  Similarity=0.133  Sum_probs=93.5

Q ss_pred             EEEEEECCCCCEEEEEeCC---------------------------CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC
Q psy11015        183 VWDVAVRPGQPVLGSASAD---------------------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD  235 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~D---------------------------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~  235 (360)
                      +.+++|+|+++.|+.++.+                           ..|.+||+.+++.+..+.. . .+..+.|+|+| 
T Consensus       106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-  182 (347)
T 2gop_A          106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-  182 (347)
T ss_dssp             EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred             ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence            9999999999988887643                           5799999999887555554 3 78899999999 


Q ss_pred             EEEEEeCCC-------cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015        236 LVLSASGDK-------SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI  308 (360)
Q Consensus       236 ~l~s~s~d~-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~  308 (360)
                      ++++++.+.       ...||.+.++.                             ...+..+ ..+..+  +|+|++|+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~l~~~d~~~-----------------------------~~~l~~~-~~~~~~--spdg~~l~  230 (347)
T 2gop_A          183 IVVNVPHREIIPQYFKFWDIYIWEDGK-----------------------------EEKMFEK-VSFYAV--DSDGERIL  230 (347)
T ss_dssp             EEEEEECCCSSCCSSCCEEEEEEETTE-----------------------------EEEEEEE-ESEEEE--EECSSCEE
T ss_pred             EEEEEecccccccccccccEEEeCCCc-----------------------------eEEeccC-cceeeE--CCCCCEEE
Confidence            888776652       45566544331                             2223333 444444  99999998


Q ss_pred             EEECC--------CcEEEEECCCCeEEEEEecCCCceEE-EEEcCCCCEEEcccc
Q psy11015        309 TASWD--------RVANLFDVETGTILQSLTEPGEAIRA-AAGRTGGPIRASPLL  354 (360)
Q Consensus       309 tgs~d--------g~i~iwd~~~~~~~~~l~~h~~~v~~-~~~~~~g~~las~~~  354 (360)
                      .++.+        ..|.+||  +++.......+...+.. ++|+ +| +++++..
T Consensus       231 ~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~  281 (347)
T 2gop_A          231 LYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFE  281 (347)
T ss_dssp             EEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEE
T ss_pred             EEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEec
Confidence            87754        3688888  66654444556678886 8999 88 7776654

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.12  E-value=1.4e-09  Score=98.00  Aligned_cols=136  Identities=11%  Similarity=0.098  Sum_probs=93.5

Q ss_pred             CCEEEEEECCCCCEEEEEeCC---C--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC------------
Q psy11015        181 DGVWDVAVRPGQPVLGSASAD---R--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD------------  243 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~D---g--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d------------  243 (360)
                      ..+.+++|+|+|+.|+.++.+   +  .|.+|++.+++.......+ . +.+++|+|+|+.|+.++.+            
T Consensus        59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~  136 (347)
T 2gop_A           59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD  136 (347)
T ss_dssp             ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred             ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence            468889999999988887754   3  4888899888766655533 4 9999999999988887642            


Q ss_pred             ---------------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015        244 ---------------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI  308 (360)
Q Consensus       244 ---------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~  308 (360)
                                     ..|.+||+.++..                            +..+.. . .+..++|+|+| .++
T Consensus       137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~----------------------------~~~l~~-~-~~~~~~~spdg-~~~  185 (347)
T 2gop_A          137 VPAWFDDLGFFDGEKTTFWIFDTESEEV----------------------------IEEFEK-P-RFSSGIWHRDK-IVV  185 (347)
T ss_dssp             CCCC---------CEEEEEEEETTTTEE----------------------------EEEEEE-E-TTCEEEEETTE-EEE
T ss_pred             cceeecCcccccCccceEEEEECCCCeE----------------------------EeeecC-C-CcccccCCCCe-EEE
Confidence                           4688888876632                            122222 2 67789999999 888


Q ss_pred             EEECCC-------cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        309 TASWDR-------VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       309 tgs~dg-------~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +++.++       ...||.+.+++. ..+..+ ..+..+  +|+|+.++...
T Consensus       186 ~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~  233 (347)
T 2gop_A          186 NVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYG  233 (347)
T ss_dssp             EEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEE
T ss_pred             EEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEE
Confidence            876652       344544445554 444444 555554  99998776544

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.11  E-value=1.3e-10  Score=106.58  Aligned_cols=140  Identities=9%  Similarity=-0.045  Sum_probs=97.0

Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEE-------------------EEEeeCCCEEEEE---
Q psy11015        183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS-------------------VRFLPNKDLVLSA---  240 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~-------------------i~~~p~~~~l~s~---  240 (360)
                      ...+.|+|+++.|+.++.++.|++||+.+++....+..+.+....                   +.|+|+++.++.+   
T Consensus        83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~  162 (396)
T 3c5m_A           83 TFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY  162 (396)
T ss_dssp             TTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred             cccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence            334789999999999999999999999998876666655443322                   3456666655443   


Q ss_pred             --eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECC----
Q psy11015        241 --SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWD----  313 (360)
Q Consensus       241 --s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~d----  313 (360)
                        ..+..|.+||+.++.                             ...+..+...+..+.|+| +|..|+..+.+    
T Consensus       163 ~~~~~~~l~~~d~~~g~-----------------------------~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~  213 (396)
T 3c5m_A          163 HTNPTCRLIKVDIETGE-----------------------------LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDL  213 (396)
T ss_dssp             HTCCCEEEEEEETTTCC-----------------------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSS
T ss_pred             cCCCcceEEEEECCCCc-----------------------------EEeeccCCcccccceECCCCCCEEEEEecCCCCC
Confidence              355678888887652                             222334566789999999 78877766543    


Q ss_pred             --CcEEEEECCCCeEEEEEecC--CCceEEEEEcCCCCEEEcc
Q psy11015        314 --RVANLFDVETGTILQSLTEP--GEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       314 --g~i~iwd~~~~~~~~~l~~h--~~~v~~~~~~~~g~~las~  352 (360)
                        ..|.+||+.++.. ..+..+  ...+..++|+|+|+.++..
T Consensus       214 ~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~  255 (396)
T 3c5m_A          214 VDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYV  255 (396)
T ss_dssp             CSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEE
T ss_pred             CCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEE
Confidence              3688899876643 333333  3358889999999866544

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.11  E-value=3.9e-09  Score=92.47  Aligned_cols=171  Identities=9%  Similarity=0.013  Sum_probs=123.5

Q ss_pred             cCCeEEEeeecCccceeeeeeeecCC-CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-cCeEEEEEee
Q psy11015        155 QTSKIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLP  232 (360)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-~~v~~i~~~p  232 (360)
                      .....+.+|.  ..+++.+.++..+. ..+.++++.|+|++++  +.++.|..||. +|+.+..+..+. ..+.++.+.|
T Consensus        12 ~~~~~v~~~d--~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~   86 (276)
T 3no2_A           12 SGWNKIAIIN--KDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILP   86 (276)
T ss_dssp             TTCSEEEEEE--TTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECT
T ss_pred             CCCCEEEEEE--CCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECC
Confidence            3344444443  44677778887776 5789999999999888  45788999999 899999998653 4788999999


Q ss_pred             CCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        233 NKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       233 ~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                      +|+++++.+. ++.+..+|. .+.........                      ....++......+++.++|+++++.+
T Consensus        87 dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~----------------------~~~~~~~~~~~~v~~~~~G~~lv~~~  143 (276)
T 3no2_A           87 DGNALVAWCGHPSTILEVNM-KGEVLSKTEFE----------------------TGIERPHAQFRQINKNKKGNYLVPLF  143 (276)
T ss_dssp             TSCEEEEEESTTEEEEEECT-TSCEEEEEEEC----------------------CSCSSGGGSCSCCEECTTSCEEEEET
T ss_pred             CCCEEEEecCCCCEEEEEeC-CCCEEEEEecc----------------------CCCCcccccccCceECCCCCEEEEec
Confidence            9999999887 777777764 44332221000                      00011222344567889999999999


Q ss_pred             CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                      .++.|..||.. |+.+.++..+ ....++...++|++++++.++
T Consensus       144 ~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~  185 (276)
T 3no2_A          144 ATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDA  185 (276)
T ss_dssp             TTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTT
T ss_pred             CCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCC
Confidence            99999999987 9999888765 345667888999988876644

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.07  E-value=5.8e-10  Score=100.04  Aligned_cols=142  Identities=9%  Similarity=-0.008  Sum_probs=111.4

Q ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      ..|++++|++++..+++.+.++.++.|   .+.....+.++...+.+++|+|+|++++++..++.|.+||..++..    
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~----   78 (333)
T 2dg1_A            6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI----   78 (333)
T ss_dssp             CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE----
T ss_pred             cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE----
Confidence            457788899988878877889999999   4666777777888899999999999888888899999999876521    


Q ss_pred             CCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC----CcEEEEECCCCeEEEEEe--cCC
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD----RVANLFDVETGTILQSLT--EPG  334 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d----g~i~iwd~~~~~~~~~l~--~h~  334 (360)
                                              ......+...+.+++|+|+|++++++..+    +.|.+||..++.....+.  .+.
T Consensus        79 ------------------------~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~  134 (333)
T 2dg1_A           79 ------------------------KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA  134 (333)
T ss_dssp             ------------------------EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSC
T ss_pred             ------------------------EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccC
Confidence                                    11122456789999999999988877766    689999998776543443  245


Q ss_pred             CceEEEEEcCCCCEEEccc
Q psy11015        335 EAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       335 ~~v~~~~~~~~g~~las~~  353 (360)
                      ..+.+++++|+|.+.++..
T Consensus       135 ~~~~~i~~d~~g~l~v~~~  153 (333)
T 2dg1_A          135 YCIDDMVFDSKGGFYFTDF  153 (333)
T ss_dssp             CCEEEEEECTTSCEEEEEC
T ss_pred             CcccceEECCCCCEEEEec
Confidence            5789999999999887765

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.07  E-value=1.6e-09  Score=99.10  Aligned_cols=145  Identities=10%  Similarity=-0.019  Sum_probs=98.6

Q ss_pred             ecCCCCEEEEEECC-CCCEEEEEeCC------CcEEEEECCCCeEEEEEeCC--CcCeEEEEEeeCCCEEEEEeCC----
Q psy11015        177 SGHRDGVWDVAVRP-GQPVLGSASAD------RTVRLWSTQTGKCVLQYSGH--SGSVNSVRFLPNKDLVLSASGD----  243 (360)
Q Consensus       177 ~~h~~~V~~l~~~~-~~~~l~sgs~D------g~v~iwd~~~~~~~~~~~~h--~~~v~~i~~~p~~~~l~s~s~d----  243 (360)
                      ..+...+..+.|+| ++..|+.++.+      ..|.+||+..+.... +..+  ...+..+.|+|+|+.|+.++.+    
T Consensus       184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~  262 (396)
T 3c5m_A          184 HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQT  262 (396)
T ss_dssp             EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTC
T ss_pred             ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCc
Confidence            35677899999999 78767666544      368889987665333 3323  2358889999999987766543    


Q ss_pred             -CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEE----------
Q psy11015        244 -KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITAS----------  311 (360)
Q Consensus       244 -~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs----------  311 (360)
                       +.|.+||+.++....                          +..+.+    .. +.|+| +|++++.++          
T Consensus       263 ~~~l~~~d~~~g~~~~--------------------------l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~  311 (396)
T 3c5m_A          263 DRVIYKANPETLENEE--------------------------VMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADA  311 (396)
T ss_dssp             CEEEEEECTTTCCEEE--------------------------EEECCS----EE-EEEECSSSSEEEEEECCC-------
T ss_pred             cceEEEEECCCCCeEE--------------------------eeeCCC----CC-CCccCCCCceEEEecCCcceeeccc
Confidence             449999987663211                          111111    22 88999 999888765          


Q ss_pred             ------CCCcEEEEECCCCeEEEEEecCCC-----------ceEEEEEcCCCCEEEcccc
Q psy11015        312 ------WDRVANLFDVETGTILQSLTEPGE-----------AIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       312 ------~dg~i~iwd~~~~~~~~~l~~h~~-----------~v~~~~~~~~g~~las~~~  354 (360)
                            .++.|.+||+.+++. ..+..+..           .+..++|+|+|..++.++.
T Consensus       312 ~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~  370 (396)
T 3c5m_A          312 DSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD  370 (396)
T ss_dssp             ---CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred             cccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence                  347899999988874 34544444           2567899999987775543

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.05  E-value=1.1e-08  Score=101.67  Aligned_cols=145  Identities=8%  Similarity=-0.092  Sum_probs=104.7

Q ss_pred             EEEEEECCCCCEEEEEeCCCc----------------EEEEECCCCeE--EEEEe--CCCcCeEEEEEeeCCCEEEEEeC
Q psy11015        183 VWDVAVRPGQPVLGSASADRT----------------VRLWSTQTGKC--VLQYS--GHSGSVNSVRFLPNKDLVLSASG  242 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~Dg~----------------v~iwd~~~~~~--~~~~~--~h~~~v~~i~~~p~~~~l~s~s~  242 (360)
                      +.+++|+|||+.|+.++.++.                |++|++.++..  ...+.  .|...+..+.|+|+|++|+.++.
T Consensus       173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~  252 (710)
T 2xdw_A          173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR  252 (710)
T ss_dssp             SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred             cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence            667899999999999988876                99999988752  23333  35566889999999998887764


Q ss_pred             -----CCcEEEEEccc------CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        243 -----DKSVHIWQAVI------NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       243 -----d~~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                           +..|.+||+.+      +.                           .....+..+...+.. .|+|+|+.|+..+
T Consensus       253 ~~~~~~~~l~~~d~~~~~~~~~~~---------------------------~~~~~l~~~~~~~~~-~~s~dg~~l~~~s  304 (710)
T 2xdw_A          253 EGCDPVNRLWYCDLQQESNGITGI---------------------------LKWVKLIDNFEGEYD-YVTNEGTVFTFKT  304 (710)
T ss_dssp             CSSSSCCEEEEEEGGGSSSSSCSS---------------------------CCCEEEECSSSSCEE-EEEEETTEEEEEE
T ss_pred             ccCCCccEEEEEECcccccccCCc---------------------------cceEEeeCCCCcEEE-EEeccCCEEEEEE
Confidence                 56799999875      21                           023445556555554 4889999887666


Q ss_pred             CC----CcEEEEECCCCe--EEEEEecCCC--ceEEEEEcCCCCEEEccccc
Q psy11015        312 WD----RVANLFDVETGT--ILQSLTEPGE--AIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       312 ~d----g~i~iwd~~~~~--~~~~l~~h~~--~v~~~~~~~~g~~las~~~~  355 (360)
                      .+    +.|.+||+.++.  ....+..|..  .+..++|++++.+++++...
T Consensus       305 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~  356 (710)
T 2xdw_A          305 NRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD  356 (710)
T ss_dssp             CTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred             CCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence            53    359999998774  2345555543  68889999888888777643

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.03  E-value=1.6e-08  Score=88.49  Aligned_cols=156  Identities=6%  Similarity=0.027  Sum_probs=120.4

Q ss_pred             ceeeeeeeecCC-CCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEEEe------CCCcCeEEEEEeeCCCEEEEE
Q psy11015        169 SCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYS------GHSGSVNSVRFLPNKDLVLSA  240 (360)
Q Consensus       169 ~~~~~~~l~~h~-~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~~~~~~~~~------~h~~~v~~i~~~p~~~~l~s~  240 (360)
                      +++.+.++..+. ..+.++.+.++|+.+++.+. ++.|..+|. +|+.+..+.      ++......+++.++|+++++.
T Consensus        64 ~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~  142 (276)
T 3no2_A           64 DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL  142 (276)
T ss_dssp             TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred             CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence            567777777653 57889999999999999887 778888885 687777664      222345567788999999999


Q ss_pred             eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy11015        241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD  320 (360)
Q Consensus       241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd  320 (360)
                      +.++.|..||.. |...                            ..+... ..+.++.+.++|+.+++++.++.|..+|
T Consensus       143 ~~~~~v~~~d~~-G~~~----------------------------w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d  192 (276)
T 3no2_A          143 FATSEVREIAPN-GQLL----------------------------NSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLN  192 (276)
T ss_dssp             TTTTEEEEECTT-SCEE----------------------------EEEECS-SCCCEEEECTTSCEEEECBTTSEEEEEC
T ss_pred             cCCCEEEEECCC-CCEE----------------------------EEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEe
Confidence            999999999987 6433                            233322 3345677889999999999889999999


Q ss_pred             CCCCeEEEEEecCC------CceEEEEEcCCCCEEEccccc
Q psy11015        321 VETGTILQSLTEPG------EAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       321 ~~~~~~~~~l~~h~------~~v~~~~~~~~g~~las~~~~  355 (360)
                      ..+|+.+..+..+.      ..+..++..++|+++++++.+
T Consensus       193 ~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g  233 (276)
T 3no2_A          193 LESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG  233 (276)
T ss_dssp             TTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred             CcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence            99999998886432      227888999999999987643

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.02  E-value=4.6e-09  Score=92.62  Aligned_cols=141  Identities=16%  Similarity=0.103  Sum_probs=100.2

Q ss_pred             CEEEEEECCCCCEEEEEeC-----------------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        182 GVWDVAVRPGQPVLGSASA-----------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~-----------------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      .+.+++++|+|+++++.+.                 .+.|..++.. ++ +..+..+...+..++|+|+++.+++.+.++
T Consensus       116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~  193 (296)
T 3e5z_A          116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDN  193 (296)
T ss_dssp             CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTT
T ss_pred             CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCC
Confidence            4678999999998887431                 2355555554 44 344555677789999999999887778889


Q ss_pred             cEEEEEcc-cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        245 SVHIWQAV-INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       245 ~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      .|.+|++. .+....                         ....+..+...+.++++.++|++.++.  ++.|.+||.. 
T Consensus       194 ~i~~~~~~~~g~~~~-------------------------~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-  245 (296)
T 3e5z_A          194 ATHRYCLNARGETEY-------------------------QGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-  245 (296)
T ss_dssp             EEEEEEECSSSCEEE-------------------------EEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred             eEEEEEECCCCcCcC-------------------------CCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence            99999986 331100                         011112344566789999999876666  7899999976 


Q ss_pred             CeEEEEEecCCCceEEEEE-cCCCCEEEccc
Q psy11015        324 GTILQSLTEPGEAIRAAAG-RTGGPIRASPL  353 (360)
Q Consensus       324 ~~~~~~l~~h~~~v~~~~~-~~~g~~las~~  353 (360)
                      ++.+..+..+.. +++++| .|++..|..++
T Consensus       246 g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t  275 (296)
T 3e5z_A          246 GDELGRVLTPQT-TSNLCFGGPEGRTLYMTV  275 (296)
T ss_dssp             SCEEEEEECSSC-CCEEEEESTTSCEEEEEE
T ss_pred             CCEEEEEECCCC-ceeEEEECCCCCEEEEEc
Confidence            888888887777 999999 58887444433

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.01  E-value=1.4e-08  Score=87.92  Aligned_cols=150  Identities=9%  Similarity=-0.094  Sum_probs=106.6

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      ...+.++++++++.++++...++.|.+|+..+.............+.+++++|+|+++++...++.|.+||.......  
T Consensus       107 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~--  184 (270)
T 1rwi_B          107 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV--  184 (270)
T ss_dssp             CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE--
T ss_pred             cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE--
Confidence            367899999999988888888899999986655433322233346789999999998887777889999997654211  


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEE
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA  339 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~  339 (360)
                                                .....+...+.++++.++|..+++...++.|.+||............+-..+.+
T Consensus       185 --------------------------~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~  238 (270)
T 1rwi_B          185 --------------------------VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLA  238 (270)
T ss_dssp             --------------------------ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEE
T ss_pred             --------------------------eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCcee
Confidence                                      111122356889999999977777777889999998755433222223356899


Q ss_pred             EEEcCCCCEEEccc-ccch
Q psy11015        340 AAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       340 ~~~~~~g~~las~~-~~~i  357 (360)
                      ++++++|++.++.. ++.|
T Consensus       239 i~~~~~g~l~v~~~~~~~v  257 (270)
T 1rwi_B          239 VAVDSDRTVYVADRGNDRV  257 (270)
T ss_dssp             EEECTTCCEEEEEGGGTEE
T ss_pred             EEECCCCCEEEEECCCCEE
Confidence            99999998766654 4444

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.99  E-value=3.8e-09  Score=105.57  Aligned_cols=147  Identities=18%  Similarity=0.077  Sum_probs=98.6

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc--------
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASAD-----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS--------  245 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~D-----g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~--------  245 (360)
                      |...+.+++|+|||+.|+.++.+     .+|++||+.+++.+.... +...+..++|+|| +.|+.++.|+.        
T Consensus       161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~  238 (741)
T 1yr2_A          161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA  238 (741)
T ss_dssp             --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred             CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence            44568889999999988877654     369999999998755321 2222357899999 98888877654        


Q ss_pred             ------EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC-----
Q psy11015        246 ------VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-----  314 (360)
Q Consensus       246 ------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg-----  314 (360)
                            |.+|++.++...                        ...+.....+...+.++.|+|||++|+..+.++     
T Consensus       239 ~~~~~~v~~~~lgt~~~~------------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~  294 (741)
T 1yr2_A          239 LNYNQTVWLHRLGTPQSA------------------------DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVN  294 (741)
T ss_dssp             CCCCCEEEEEETTSCGGG------------------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCC
T ss_pred             CCCCCEEEEEECCCCchh------------------------CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcc
Confidence                  788887655210                        011222223444688999999999998777544     


Q ss_pred             cEEEEECCCC--eEEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        315 VANLFDVETG--TILQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       315 ~i~iwd~~~~--~~~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                      .|.+||+.++  .+...+..+...+....+ |+|..++..
T Consensus       295 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~dg~~l~~~  333 (741)
T 1yr2_A          295 TVHVARVTNGKIGPVTALIPDLKAQWDFVD-GVGDQLWFV  333 (741)
T ss_dssp             EEEEEEEETTEECCCEEEECSSSSCEEEEE-EETTEEEEE
T ss_pred             eEEEEECCCCCCcccEEecCCCCceEEEEe-ccCCEEEEE
Confidence            7999999877  314566656555555544 666655433

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.96  E-value=8.2e-08  Score=84.77  Aligned_cols=143  Identities=15%  Similarity=0.067  Sum_probs=100.5

Q ss_pred             CCEEEEEECCCCCEEEEEeCC---------CcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEE
Q psy11015        181 DGVWDVAVRPGQPVLGSASAD---------RTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVHIW  249 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~D---------g~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vw  249 (360)
                      ..+++++++|+|+++++...+         ..-.||.+.. +.... +..+....+.++|+|+++.+ ++.+.++.|.+|
T Consensus        98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~  176 (297)
T 3g4e_A           98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAF  176 (297)
T ss_dssp             EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred             CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEE
Confidence            457899999999976655322         3345555543 33333 33344567899999999866 555667899999


Q ss_pred             Ecc--cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        250 QAV--INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       250 d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      |+.  ++...                       .......+..+...+..+++.++|++.++...++.|..||..+|+.+
T Consensus       177 ~~d~~~G~~~-----------------------~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~  233 (297)
T 3g4e_A          177 DYDLQTGQIS-----------------------NRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL  233 (297)
T ss_dssp             EECTTTCCEE-----------------------EEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEE
T ss_pred             eccCCCCccc-----------------------CcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEE
Confidence            873  33211                       01122233334457889999999988888877889999999999999


Q ss_pred             EEEecCCCceEEEEEc-CCCC
Q psy11015        328 QSLTEPGEAIRAAAGR-TGGP  347 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~-~~g~  347 (360)
                      ..+..+...+++++|. |++.
T Consensus       234 ~~i~~p~~~~t~~~f~g~d~~  254 (297)
T 3g4e_A          234 QTVKLPVDKTTSCCFGGKNYS  254 (297)
T ss_dssp             EEEECSSSBEEEEEEESGGGC
T ss_pred             EEEECCCCCceEEEEeCCCCC
Confidence            9998887789999998 7765

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.96  E-value=4.2e-08  Score=88.05  Aligned_cols=154  Identities=8%  Similarity=-0.094  Sum_probs=109.4

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-----cCeEEEEEeeCCCEEEEEe
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-----GSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-----~~v~~i~~~p~~~~l~s~s  241 (360)
                      ..+++.+.++.. ......+++++++.++++...++.|.+||..+++....+....     .....+++ .++.++++..
T Consensus        71 ~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~  148 (328)
T 3dsm_A           71 INTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCW  148 (328)
T ss_dssp             TTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEEC
T ss_pred             CcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcC
Confidence            345666677743 4678899998888555555489999999999999887776433     14567777 4555455544


Q ss_pred             -CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-------
Q psy11015        242 -GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-------  313 (360)
Q Consensus       242 -~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-------  313 (360)
                       .+++|.+||+.++...                            ..+.. ......++++|+|++++++..+       
T Consensus       149 ~~~~~v~viD~~t~~~~----------------------------~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~  199 (328)
T 3dsm_A          149 SYQNRILKIDTETDKVV----------------------------DELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYG  199 (328)
T ss_dssp             TTCCEEEEEETTTTEEE----------------------------EEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSC
T ss_pred             CCCCEEEEEECCCCeEE----------------------------EEEEc-CCCccceEEcCCCCEEEEECCCccCCccc
Confidence             4889999999877432                            22222 1234578899999877776654       


Q ss_pred             ---CcEEEEECCCCeEEEEEecC-CCceEEEEEcCCCCEEEc
Q psy11015        314 ---RVANLFDVETGTILQSLTEP-GEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       314 ---g~i~iwd~~~~~~~~~l~~h-~~~v~~~~~~~~g~~las  351 (360)
                         +.|.+||..+++....+... ......++|+|++..+..
T Consensus       200 ~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv  241 (328)
T 3dsm_A          200 YEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW  241 (328)
T ss_dssp             BCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred             cCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence               78999999999988777643 346899999998876654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.94  E-value=2.1e-08  Score=86.77  Aligned_cols=145  Identities=10%  Similarity=-0.049  Sum_probs=103.1

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      +...+.++++++++.++++.. ++.|.+||....... .+. .....+.+++++|+|+++++...++.|.+|+..+... 
T Consensus        65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-  141 (270)
T 1rwi_B           65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-  141 (270)
T ss_dssp             SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-
T ss_pred             CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-
Confidence            345688999999998666666 889999998765433 332 2335789999999999888877888999996543211 


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCce
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI  337 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v  337 (360)
                                                 ..........+.+++++|+|+.+++...++.|.+||...+........+...+
T Consensus       142 ---------------------------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p  194 (270)
T 1rwi_B          142 ---------------------------TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAP  194 (270)
T ss_dssp             ---------------------------EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSE
T ss_pred             ---------------------------EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCc
Confidence                                       01111222356789999999977777778899999988766543333333678


Q ss_pred             EEEEEcCCCCEEEccc
Q psy11015        338 RAAAGRTGGPIRASPL  353 (360)
Q Consensus       338 ~~~~~~~~g~~las~~  353 (360)
                      .+++++++|.+.++..
T Consensus       195 ~~i~~d~~g~l~v~~~  210 (270)
T 1rwi_B          195 WGIAVDEAGTVYVTEH  210 (270)
T ss_dssp             EEEEECTTCCEEEEET
T ss_pred             eEEEECCCCCEEEEEC
Confidence            9999999998776654

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.91  E-value=8.5e-08  Score=84.81  Aligned_cols=147  Identities=12%  Similarity=0.034  Sum_probs=105.8

Q ss_pred             CCEEEEEECCCCCEEEEEeCC---------------CcEEEEECCCCeEEEEEeCCCcCeEEEEEe----eCCCEEE-EE
Q psy11015        181 DGVWDVAVRPGQPVLGSASAD---------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFL----PNKDLVL-SA  240 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~D---------------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~----p~~~~l~-s~  240 (360)
                      ..+.++++++++.++++...+               +.|..|+.. ++..... .+......++|+    |+++.++ +.
T Consensus       117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~  194 (314)
T 1pjx_A          117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAE  194 (314)
T ss_dssp             BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred             cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEE
Confidence            458899999999888777665               567777766 5543333 344567899999    9996554 44


Q ss_pred             eCCCcEEEEEcc-cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC-CcEEEEEEcCCCCEEEEEECCCcEEE
Q psy11015        241 SGDKSVHIWQAV-INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASWDRVANL  318 (360)
Q Consensus       241 s~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~sp~g~~l~tgs~dg~i~i  318 (360)
                      ..++.|.+||+. .+....                       ......+.++. ..+..++++++|+.+++...++.|.+
T Consensus       195 ~~~~~i~~~~~~~~g~~~~-----------------------~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~  251 (314)
T 1pjx_A          195 TPTKKLWSYDIKGPAKIEN-----------------------KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV  251 (314)
T ss_dssp             TTTTEEEEEEEEETTEEEE-----------------------EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred             CCCCeEEEEECCCCCcccc-----------------------ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence            567899999976 231110                       01122333444 56788999999998888888899999


Q ss_pred             EECCCCeEEEEEecCCCceEEEEEcCCCC-EEEcc
Q psy11015        319 FDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASP  352 (360)
Q Consensus       319 wd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~  352 (360)
                      ||..+++.+..+..+...+.+++|+|+|. +.++.
T Consensus       252 ~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~  286 (314)
T 1pjx_A          252 FGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE  286 (314)
T ss_dssp             ECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred             EcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEe
Confidence            99987877777777777899999999998 44443

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.85  E-value=8.6e-08  Score=94.97  Aligned_cols=140  Identities=8%  Similarity=-0.041  Sum_probs=96.0

Q ss_pred             EEEEECCCCCEEEEEeCCCc-------------EEEEECCCCe----EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--
Q psy11015        184 WDVAVRPGQPVLGSASADRT-------------VRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--  244 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~Dg~-------------v~iwd~~~~~----~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~--  244 (360)
                      ..++|+|+|+.|+.++.|..             |++|++.++.    ++....+|...+.++.|+|+|++|+.++.++  
T Consensus       171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~  250 (695)
T 2bkl_A          171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS  250 (695)
T ss_dssp             CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred             cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence            67899999999999998876             9999998875    3333344566889999999999888877665  


Q ss_pred             --cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE---CCCcEEEE
Q psy11015        245 --SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS---WDRVANLF  319 (360)
Q Consensus       245 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs---~dg~i~iw  319 (360)
                        .|.+|+..++                             ....+..+...+....| ++|..++++.   .++.|.+|
T Consensus       251 ~~~l~~~~~~~~-----------------------------~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~  300 (695)
T 2bkl_A          251 ENDVYWKRPGEK-----------------------------DFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEV  300 (695)
T ss_dssp             EEEEEEECTTCS-----------------------------SCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEE
T ss_pred             ceEEEEEcCCCC-----------------------------ceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEE
Confidence              4555544322                             23444455555666666 5666444443   25789999


Q ss_pred             ECCCCeE--EEEEecC--CCceEEEEEcCCCCEEEcccc
Q psy11015        320 DVETGTI--LQSLTEP--GEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       320 d~~~~~~--~~~l~~h--~~~v~~~~~~~~g~~las~~~  354 (360)
                      |+.++..  ...+..+  ...+..++|+ ++.++++...
T Consensus       301 d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~  338 (695)
T 2bkl_A          301 DPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK  338 (695)
T ss_dssp             BTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred             eCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence            9987752  2333333  4568888888 6667776553

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.84  E-value=1e-06  Score=84.84  Aligned_cols=166  Identities=8%  Similarity=-0.097  Sum_probs=114.0

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEEEeCCCcCeEEEEEe----eCCCEEEEE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFL----PNKDLVLSA  240 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~--~~~~~~~~~~h~~~v~~i~~~----p~~~~l~s~  240 (360)
                      ..+++.+.++... ..+..+.|+|+++++++++.|+.|.+||+.  +++.+..+... .....++|+    |+|++++++
T Consensus       184 ~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~  261 (567)
T 1qks_A          184 GSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAG  261 (567)
T ss_dssp             TTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEE
T ss_pred             CCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEE
Confidence            3456667676543 356789999999999999999999999996  88888888753 346899999    699988776


Q ss_pred             eC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC-CcEEEEEEcCCCCEE-EEEECCCcEE
Q psy11015        241 SG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQV-ITASWDRVAN  317 (360)
Q Consensus       241 s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~sp~g~~l-~tgs~dg~i~  317 (360)
                      +. ++++.++|..+......+....                  ........|. ..+.++..++++..+ ++...+|.|.
T Consensus       262 n~~~~~v~ViD~~t~~~~~~i~~~~------------------~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~  323 (567)
T 1qks_A          262 AYWPPQYVIMDGETLEPKKIQSTRG------------------MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL  323 (567)
T ss_dssp             EEETTEEEEEETTTCCEEEEEECCE------------------ECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred             EccCCeEEEEECCCCcEEEEEeccc------------------cccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence            64 5899999987764432210000                  0000000122 267788888886654 5556679999


Q ss_pred             EEECCCCeEE--EEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        318 LFDVETGTIL--QSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       318 iwd~~~~~~~--~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ++|..+...+  ..+. ......++.|+|+|+++..+.
T Consensus       324 ~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~  360 (567)
T 1qks_A          324 LVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAA  360 (567)
T ss_dssp             EEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEE
T ss_pred             EEecCCCccceeeeee-ccccccCceECCCCCEEEEEe
Confidence            9998865432  2332 345677889999999876544

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.83  E-value=1.6e-07  Score=90.50  Aligned_cols=130  Identities=12%  Similarity=-0.016  Sum_probs=100.7

Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc--cCeeEeeeCCCCCCC
Q psy11015        190 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV--INWECLVSNNDNDSD  267 (360)
Q Consensus       190 ~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~--~~~~~~~~~~~~~~~  267 (360)
                      |.+.++++...+++|.++|..+++.+..+.. ...+..+.|+|+|+++++++.|+.|.+||+.  ++             
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-------------  230 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP-------------  230 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-------------
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC-------------
Confidence            4455778888899999999999999988873 4467899999999999999999999999985  43             


Q ss_pred             CCCCCCCCCCccccccceeEeeCCCCcEEEEEEc----CCCCEEEEEEC-CCcEEEEECCCCeEEEEEecC---------
Q psy11015        268 LDESKEPDESSITLRTPVKELLGHSNVVIAADWL----SDGEQVITASW-DRVANLFDVETGTILQSLTEP---------  333 (360)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s----p~g~~l~tgs~-dg~i~iwd~~~~~~~~~l~~h---------  333 (360)
                                     +.+..+... .....++|+    |+|+++++++. ++.+.++|..+.+.+.++...         
T Consensus       231 ---------------~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~  294 (567)
T 1qks_A          231 ---------------TTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY  294 (567)
T ss_dssp             ---------------CEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCE
T ss_pred             ---------------cEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccc
Confidence                           223444432 346789999    69999877654 599999999999998877532         


Q ss_pred             --CCceEEEEEcCCCCEE
Q psy11015        334 --GEAIRAAAGRTGGPIR  349 (360)
Q Consensus       334 --~~~v~~~~~~~~g~~l  349 (360)
                        ...+.++..++++..+
T Consensus       295 ~p~~rva~i~~s~~~~~~  312 (567)
T 1qks_A          295 HPEPRVAAILASHYRPEF  312 (567)
T ss_dssp             ESCCCEEEEEECSSSSEE
T ss_pred             cCCCceEEEEEcCCCCEE
Confidence              1257778888876543

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.82  E-value=1.6e-06  Score=75.75  Aligned_cols=144  Identities=11%  Similarity=0.049  Sum_probs=105.5

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      .+...+.++++++++.++++...++.|..||.. +.. ..+.  .....+.++++.|+|.++++...++.|.+||. ++.
T Consensus        54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~  130 (299)
T 2z2n_A           54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK  130 (299)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred             cccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence            345789999999999888887778999999986 432 2232  34557899999999988888777889999987 431


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE-EecCC
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTEPG  334 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~-l~~h~  334 (360)
                      ..                           ......+...+.++++.++|+..++...++.|..||. +++.... +..+.
T Consensus       131 ~~---------------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~  182 (299)
T 2z2n_A          131 IR---------------------------EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPA  182 (299)
T ss_dssp             EE---------------------------EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred             EE---------------------------EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCC
Confidence            11                           0111223456889999999988887777789999998 6765432 23345


Q ss_pred             CceEEEEEcCCCCEEEcc
Q psy11015        335 EAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       335 ~~v~~~~~~~~g~~las~  352 (360)
                      ..+.+++++++|.+.++.
T Consensus       183 ~~~~~i~~~~~g~l~v~~  200 (299)
T 2z2n_A          183 SGPVGITKGNDDALWFVE  200 (299)
T ss_dssp             CCEEEEEECTTSSEEEEE
T ss_pred             CcceeEEECCCCCEEEEc
Confidence            568899999999876655

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.81  E-value=6.4e-07  Score=78.28  Aligned_cols=148  Identities=9%  Similarity=0.007  Sum_probs=107.9

Q ss_pred             eecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE-eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      +..+...+.++++++++.++++...++.|.+||.. +...... ..+...+.++++.++|.++++...++.|..||....
T Consensus        10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~   88 (299)
T 2z2n_A           10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI   88 (299)
T ss_dssp             CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred             CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc
Confidence            34556789999999999888777778999999988 6533322 234567999999999998888777888999986521


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE-EecC
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTEP  333 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~-l~~h  333 (360)
                       ..                           ...+......+.++++.|+|..+++...++.|..||. ++..... ...+
T Consensus        89 -~~---------------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~  139 (299)
T 2z2n_A           89 -IK---------------------------EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK  139 (299)
T ss_dssp             -EE---------------------------EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred             -EE---------------------------EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence             10                           0111123456889999999988888777899999998 6654432 2234


Q ss_pred             CCceEEEEEcCCCCEEEccc
Q psy11015        334 GEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las~~  353 (360)
                      ...+.+++++++|.+.++..
T Consensus       140 ~~~~~~i~~~~~g~l~v~~~  159 (299)
T 2z2n_A          140 GSYPSFITLGSDNALWFTEN  159 (299)
T ss_dssp             TCCEEEEEECTTSCEEEEET
T ss_pred             CCCCceEEEcCCCCEEEEeC
Confidence            56789999999998777654

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.77  E-value=7.4e-08  Score=95.45  Aligned_cols=150  Identities=11%  Similarity=0.050  Sum_probs=97.4

Q ss_pred             cCCCCEEEEEECCCCCEEEEE-----eCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc-------
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSA-----SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-------  245 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sg-----s~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~-------  245 (360)
                      +|...+..++|+|||++|+-+     +...+|++||+.+|+.+.... +......++|+ ||+.|+.++.+..       
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~  203 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA  203 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence            456678899999999987743     333579999999998654311 11113578899 9999988887743       


Q ss_pred             ------EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEEEEC----CC
Q psy11015        246 ------VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASW----DR  314 (360)
Q Consensus       246 ------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~tgs~----dg  314 (360)
                            |++|++.++...                        ...+..... |...+.++.|+|||++|+....    +.
T Consensus       204 ~~~~~~v~~~~lgt~~~~------------------------~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~  259 (693)
T 3iuj_A          204 RTDQHKVYFHRLGTAQED------------------------DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGN  259 (693)
T ss_dssp             -CCCCEEEEEETTSCGGG------------------------CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCC
T ss_pred             cCCCcEEEEEECCCCccc------------------------ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCc
Confidence                  888988765210                        012222233 4456788999999998854432    25


Q ss_pred             cEEEEECCCCe-EEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        315 VANLFDVETGT-ILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       315 ~i~iwd~~~~~-~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      .|++||+.++. ....+..+.........++++.+++.+.
T Consensus       260 ~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~  299 (693)
T 3iuj_A          260 RLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTN  299 (693)
T ss_dssp             EEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEEC
T ss_pred             EEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEEC
Confidence            79999998763 3456666666665553333444444443

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.77  E-value=2e-06  Score=78.48  Aligned_cols=183  Identities=9%  Similarity=-0.090  Sum_probs=115.8

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC-------CcCeEEEE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSVR  229 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h-------~~~v~~i~  229 (360)
                      ..+++.+.++.....+  .++++|+++.++.+.          .++.|.+||..+.+.+..+.--       ......+.
T Consensus        54 ~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~  131 (373)
T 2mad_H           54 AGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNA  131 (373)
T ss_pred             CCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceE
Confidence            3455666777654444  999999999888875          3678999999998877776522       12356899


Q ss_pred             EeeCCCEEEEEeC--CCcEEEEEcccCeeEee-eCCCCCC---------------CCCC---------C---C-----CC
Q psy11015        230 FLPNKDLVLSASG--DKSVHIWQAVINWECLV-SNNDNDS---------------DLDE---------S---K-----EP  274 (360)
Q Consensus       230 ~~p~~~~l~s~s~--d~~i~vwd~~~~~~~~~-~~~~~~~---------------~~~~---------~---~-----~~  274 (360)
                      |+|+|++++.++.  ++.|.++| .++..... +....+.               ....         .   .     ..
T Consensus       132 ~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~  210 (373)
T 2mad_H          132 NTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA  210 (373)
T ss_pred             ECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccC
Confidence            9999999998874  47899999 88866555 3332110               0000         0   0     00


Q ss_pred             C------------CCcc---cccccee-------------EeeC----------CCCcEEEEEEcCCCCEEEEEEC----
Q psy11015        275 D------------ESSI---TLRTPVK-------------ELLG----------HSNVVIAADWLSDGEQVITASW----  312 (360)
Q Consensus       275 ~------------~~~~---~~~~~~~-------------~~~~----------h~~~v~~i~~sp~g~~l~tgs~----  312 (360)
                      .            ....   .....+.             .+.-          .......++++|+++.++.+..    
T Consensus       211 ~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~  290 (373)
T 2mad_H          211 AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA  290 (373)
T ss_pred             CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence            0            0000   0000000             0000          0112333778889888877653    


Q ss_pred             ------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEccc
Q psy11015        313 ------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL  353 (360)
Q Consensus       313 ------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~  353 (360)
                            ++.|.++|..+++.+.++.. .....+++|+|+|+ +++++.
T Consensus       291 ~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~  337 (373)
T 2mad_H          291 WKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALS  337 (373)
T ss_pred             ccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEc
Confidence                  35799999999999999864 34689999999998 565543

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.76  E-value=7.7e-07  Score=82.34  Aligned_cols=145  Identities=17%  Similarity=0.123  Sum_probs=99.6

Q ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--cEEEEEcccCeeEe
Q psy11015        181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWECL  258 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i~vwd~~~~~~~~  258 (360)
                      ...+.|+|++++.++++...++.|++||..++......... .... ++|+|+++.++++..++  .|.+|+...+....
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~  208 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT  208 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence            46789999999988888888899999999988776665543 3334 99999999988888766  78888876542210


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE----EecC
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS----LTEP  333 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~----l~~h  333 (360)
                                               .+..+.. ....+.+++++|++..|+.+..++.|+.||..++.....    ..++
T Consensus       209 -------------------------~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~  263 (409)
T 3hrp_A          209 -------------------------RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS  263 (409)
T ss_dssp             -------------------------EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred             -------------------------EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC
Confidence                                     0111112 345677899999655666677789999999987763322    1222


Q ss_pred             CCce--EEEEEcC-CCCEEEcc
Q psy11015        334 GEAI--RAAAGRT-GGPIRASP  352 (360)
Q Consensus       334 ~~~v--~~~~~~~-~g~~las~  352 (360)
                      ...-  ..++|+| ++.+.++.
T Consensus       264 ~~~~P~~~ia~~p~~g~lyv~d  285 (409)
T 3hrp_A          264 LGTNPGPYLIYYFVDSNFYMSD  285 (409)
T ss_dssp             CCCSSCCEEEEETTTTEEEEEE
T ss_pred             CCCCccccEEEeCCCCEEEEEe
Confidence            2222  3899999 56665553

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.74  E-value=4.9e-07  Score=81.02  Aligned_cols=141  Identities=13%  Similarity=-0.041  Sum_probs=101.8

Q ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      ....++++.. +.++++...++.|.+||..+++.+..+. .......++++|++.++++...++.|.+||..++....  
T Consensus        44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~--  119 (328)
T 3dsm_A           44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG--  119 (328)
T ss_dssp             SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE--
T ss_pred             ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE--
Confidence            3467777753 4466666778999999999999988886 45678999999999655555489999999998774322  


Q ss_pred             CCCCCCCCCCCCCCCCCccccccceeEeeCC-----CCcEEEEEEcCCCCEEEEEE--CCCcEEEEECCCCeEEEEEecC
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPVKELLGH-----SNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSLTEP  333 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~i~~sp~g~~l~tgs--~dg~i~iwd~~~~~~~~~l~~h  333 (360)
                                                .+...     ......+++  ++..++.++  .++.|.+||..+++.+..+...
T Consensus       120 --------------------------~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g  171 (328)
T 3dsm_A          120 --------------------------YIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG  171 (328)
T ss_dssp             --------------------------EEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred             --------------------------EEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence                                      12111     113455666  455555555  4899999999999988888653


Q ss_pred             CCceEEEEEcCCCCEEEcccc
Q psy11015        334 GEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las~~~  354 (360)
                       .....++++|+|++++++..
T Consensus       172 -~~p~~i~~~~dG~l~v~~~~  191 (328)
T 3dsm_A          172 -IQPTSLVMDKYNKMWTITDG  191 (328)
T ss_dssp             -SCBCCCEECTTSEEEEEBCC
T ss_pred             -CCccceEEcCCCCEEEEECC
Confidence             34578899999998777653

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.72  E-value=7.6e-07  Score=82.39  Aligned_cols=164  Identities=13%  Similarity=0.024  Sum_probs=103.5

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEE----EeCCCcCe-E-EEEEeeC-CCEEEEEeCCCcEEEEEc
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ----YSGHSGSV-N-SVRFLPN-KDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~----~~~h~~~v-~-~i~~~p~-~~~l~s~s~d~~i~vwd~  251 (360)
                      +...+++++++|++..|+.+..++.|+.||..++.....    ..++.+.- . .++|+|+ +.++++...++.|..|+.
T Consensus       217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~  296 (409)
T 3hrp_A          217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP  296 (409)
T ss_dssp             SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred             hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence            456678999999555555577789999999987754332    22222222 3 9999995 666677777889999987


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEE
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSL  330 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l  330 (360)
                      ........-..  ...     .     ....   ......-.....++|+|+|+++++-+ .++.|+.||+.++.. .++
T Consensus       297 ~g~~~~~~g~~--~~~-----g-----~~dg---~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~  360 (409)
T 3hrp_A          297 DGECEWFCGSA--TQK-----T-----VQDG---LREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STV  360 (409)
T ss_dssp             TCCEEEEEECT--TCC-----S-----CBCE---EGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEE
T ss_pred             CCCEEEEEeCC--CCC-----C-----cCCC---cccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEE
Confidence            64321111000  000     0     0000   00001123478999999999777777 789999999888864 444


Q ss_pred             ecC---------------CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        331 TEP---------------GEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       331 ~~h---------------~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .++               -.....++++++|.++++-. ...||
T Consensus       361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir  404 (409)
T 3hrp_A          361 AGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIR  404 (409)
T ss_dssp             EECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEE
T ss_pred             eCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEE
Confidence            443               13578999999998776654 33443

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.71  E-value=2.4e-06  Score=76.40  Aligned_cols=146  Identities=10%  Similarity=0.011  Sum_probs=98.6

Q ss_pred             CCEEEEEECCCCCEEEEEeC------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEE-EeCCCcEEEEEcc-
Q psy11015        181 DGVWDVAVRPGQPVLGSASA------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS-ASGDKSVHIWQAV-  252 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s-~s~d~~i~vwd~~-  252 (360)
                      ..+++++++|+|+++++...      .+.|..++  +++... +..+......++|+|+++.++. .+.++.|.+||+. 
T Consensus       134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~  210 (326)
T 2ghs_A          134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA  210 (326)
T ss_dssp             EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred             CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence            36889999999987665542      24555555  555433 3233456789999999986644 4567889999975 


Q ss_pred             -cC-eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE
Q psy11015        253 -IN-WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  330 (360)
Q Consensus       253 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l  330 (360)
                       ++ ...                       .......+......+.++++.++|++.++...++.|..||. +++.+..+
T Consensus       211 ~~Gl~~~-----------------------~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i  266 (326)
T 2ghs_A          211 RTGLPTG-----------------------KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY  266 (326)
T ss_dssp             TTCCBSS-----------------------CCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred             ccCCccc-----------------------CceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence             33 100                       00111222233456778999999988777767789999998 67778888


Q ss_pred             ecCCCceEEEEEc-CCCCEE-Eccc
Q psy11015        331 TEPGEAIRAAAGR-TGGPIR-ASPL  353 (360)
Q Consensus       331 ~~h~~~v~~~~~~-~~g~~l-as~~  353 (360)
                      ..+...+++++|. +++..+ +++.
T Consensus       267 ~~~~~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          267 EVPGKQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             ECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             ECCCCCcEEEEEecCCCCEEEEEec
Confidence            7777789999998 887543 4433

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.68  E-value=1.1e-06  Score=87.72  Aligned_cols=142  Identities=15%  Similarity=0.057  Sum_probs=95.4

Q ss_pred             EEEEECCCCCEEEEEeCCCc--------------EEEEECCCCe--EEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCC-
Q psy11015        184 WDVAVRPGQPVLGSASADRT--------------VRLWSTQTGK--CVLQYS--GHSGSVNSVRFLPNKDLVLSASGDK-  244 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~Dg~--------------v~iwd~~~~~--~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~-  244 (360)
                      ..++|+|+ +.|+.++.|+.              |++|++.++.  ....+.  .+...+.++.|+|||++|+..+.++ 
T Consensus       212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~  290 (741)
T 1yr2_A          212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT  290 (741)
T ss_dssp             CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred             ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence            56789999 88888887654              8999998764  233343  3334688999999999888776543 


Q ss_pred             ----cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC----CcE
Q psy11015        245 ----SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD----RVA  316 (360)
Q Consensus       245 ----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d----g~i  316 (360)
                          .|.+||+.++..                          .+...+..+...+... ++|+|+.|+..+.+    +.|
T Consensus       291 ~~~~~l~~~d~~~~~~--------------------------~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l  343 (741)
T 1yr2_A          291 DPVNTVHVARVTNGKI--------------------------GPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKI  343 (741)
T ss_dssp             CSCCEEEEEEEETTEE--------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEE
T ss_pred             CCcceEEEEECCCCCC--------------------------cccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEE
Confidence                789999875411                          0023344454444444 34899998887764    459


Q ss_pred             EEEECCCC--eEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        317 NLFDVETG--TILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       317 ~iwd~~~~--~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      .+||+.++  .....+..+...+..++|. ++.++++...
T Consensus       344 ~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~  382 (741)
T 1yr2_A          344 VRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIH  382 (741)
T ss_dssp             EEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEE
T ss_pred             EEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEE
Confidence            99999874  4444444555567778887 5566666543

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.67  E-value=7.6e-07  Score=80.26  Aligned_cols=169  Identities=11%  Similarity=-0.034  Sum_probs=106.1

Q ss_pred             cceeeeeeeec------CCCCEEEEEECCCCC-EEEEEe---CCCcEEEEECCCCeEEEEEeCCC---------------
Q psy11015        168 LSCYKIRSFSG------HRDGVWDVAVRPGQP-VLGSAS---ADRTVRLWSTQTGKCVLQYSGHS---------------  222 (360)
Q Consensus       168 ~~~~~~~~l~~------h~~~V~~l~~~~~~~-~l~sgs---~Dg~v~iwd~~~~~~~~~~~~h~---------------  222 (360)
                      .+++.++++..      +...+..+++++++. .+++.+   .++.|.+||+.+++....+.+|.               
T Consensus       101 ~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~  180 (343)
T 2qe8_A          101 LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVP  180 (343)
T ss_dssp             TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEE
T ss_pred             CCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEE
Confidence            34455555442      234568999998644 455555   67899999999887766654431               


Q ss_pred             --------------cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe
Q psy11015        223 --------------GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL  288 (360)
Q Consensus       223 --------------~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (360)
                                    ..+..|+|+|+|+.|+.+..++. ++|.+.......               ...........+ ..
T Consensus       181 ~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~---------------~~~~~~~~~~~~-~~  243 (343)
T 2qe8_A          181 VQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSN---------------LQLTDAELGSKI-ER  243 (343)
T ss_dssp             CBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTC---------------TTCCHHHHHTTC-EE
T ss_pred             EEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcC---------------CCCChhhhhcce-Ee
Confidence                          13688999999998888877664 455543210000               000000000011 11


Q ss_pred             eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC-CCceEEEEEcCCCCEEEccc
Q psy11015        289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP-GEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       289 ~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h-~~~v~~~~~~~~g~~las~~  353 (360)
                      .++.+....++++++|..+++...++.|.+||..+|+........ -...++++|.++|.+++++.
T Consensus       244 ~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~  309 (343)
T 2qe8_A          244 YSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN  309 (343)
T ss_dssp             EEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred             cccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence            233345667899999999998888999999998567643333322 44689999999998777665

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.67  E-value=6e-06  Score=72.65  Aligned_cols=145  Identities=14%  Similarity=0.148  Sum_probs=95.6

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC----CCcCeEEEEEeeCCCEEEEEeCC---------Cc
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG----HSGSVNSVRFLPNKDLVLSASGD---------KS  245 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~----h~~~v~~i~~~p~~~~l~s~s~d---------~~  245 (360)
                      +...+.+++++++++++++.  ++.|.+||..+++.......    ....+++++++|+|+++++...+         ..
T Consensus        52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~  129 (297)
T 3g4e_A           52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ  129 (297)
T ss_dssp             CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC
T ss_pred             CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC
Confidence            34679999999999955543  56899999988865443332    12358899999999977654322         33


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE-EEECCCcEEEEEC--C
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASWDRVANLFDV--E  322 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~-tgs~dg~i~iwd~--~  322 (360)
                      ..||.+....                            ....+..+-...+.++|+|+++.++ +.+.++.|.+||+  .
T Consensus       130 ~~l~~~d~~g----------------------------~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~  181 (297)
T 3g4e_A          130 GALYSLFPDH----------------------------HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQ  181 (297)
T ss_dssp             EEEEEECTTS----------------------------CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTT
T ss_pred             cEEEEEECCC----------------------------CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCC
Confidence            4666654321                            1111222334568899999999775 4556789999987  4


Q ss_pred             CCeEE-----EEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        323 TGTIL-----QSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       323 ~~~~~-----~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +|...     ..+..+......++++++|++.++..
T Consensus       182 ~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~  217 (297)
T 3g4e_A          182 TGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY  217 (297)
T ss_dssp             TCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE
T ss_pred             CCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc
Confidence            56432     22233345678999999998777654

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.61  E-value=2e-05  Score=68.69  Aligned_cols=146  Identities=11%  Similarity=0.004  Sum_probs=104.6

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      .+...+.++++.+++.+.++...++.|..||.. ++... .+......+.++++.++|.++++...++.|..||.. +..
T Consensus        59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~  136 (300)
T 2qc5_A           59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI  136 (300)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred             CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence            345679999999999888877778899999988 65432 222234678999999999988887778889999876 321


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE-EecCCC
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTEPGE  335 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~-l~~h~~  335 (360)
                      .                           ...+......+.++++.++|+..++...++.|..||. +++.... +..+..
T Consensus       137 ~---------------------------~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~  188 (300)
T 2qc5_A          137 Y---------------------------EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAA  188 (300)
T ss_dssp             E---------------------------EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC
T ss_pred             E---------------------------EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCC
Confidence            1                           0111223456889999999997776666788999998 5654432 223445


Q ss_pred             ceEEEEEcCCCCEEEccc
Q psy11015        336 AIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~~  353 (360)
                      .+.+++++++|.+.++..
T Consensus       189 ~~~~i~~d~~g~l~v~~~  206 (300)
T 2qc5_A          189 APVGITSGNDGALWFVEI  206 (300)
T ss_dssp             CEEEEEECTTSSEEEEET
T ss_pred             CcceEEECCCCCEEEEcc
Confidence            789999999998766553

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.61  E-value=9.1e-07  Score=78.27  Aligned_cols=150  Identities=14%  Similarity=0.013  Sum_probs=102.5

Q ss_pred             eeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      ..+..+..+........|+|+++ +++++..++.|..|+. ++. ...+..+...+..++++++|+++++...++.|.+|
T Consensus        35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~  112 (305)
T 3dr2_A           35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRS  112 (305)
T ss_dssp             CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred             CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence            34455556666778899999998 7788888999999998 454 34555567789999999999977666666889999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC-CCcEEEEEEcCCCCEEEE----EEC------------
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH-SNVVIAADWLSDGEQVIT----ASW------------  312 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~i~~sp~g~~l~t----gs~------------  312 (360)
                      +.. +....                         ......+. ...+..+++.|+|+..+|    |..            
T Consensus       113 ~~~-g~~~~-------------------------~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~  166 (305)
T 3dr2_A          113 DAD-GQAHL-------------------------LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPEL  166 (305)
T ss_dssp             CTT-SCEEE-------------------------EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSS
T ss_pred             CCC-CCEEE-------------------------EEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccccc
Confidence            875 32110                         00011111 134667999999998887    332            


Q ss_pred             -CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEE
Q psy11015        313 -DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       313 -dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~la  350 (360)
                       .+.|..||..+++.....  .......++|+|+|..+.
T Consensus       167 ~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~ly  203 (305)
T 3dr2_A          167 AHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLY  203 (305)
T ss_dssp             SCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEE
T ss_pred             CCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEE
Confidence             256778887666543333  334568899999998544

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.59  E-value=8.6e-06  Score=70.98  Aligned_cols=146  Identities=10%  Similarity=0.006  Sum_probs=106.3

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      .....+.++++.+++.+.++...++.|.+||.. ++... .+..+...+.++++.++|.++++...++.|..||.. +..
T Consensus        17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~   94 (300)
T 2qc5_A           17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF   94 (300)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence            345678999999999888887788999999988 65433 222334678999999999988877778889999876 421


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE-EecCCC
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTEPGE  335 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~-l~~h~~  335 (360)
                      .                           ...+......+.++++.++|+.+++...++.|..||.. ++.... +.....
T Consensus        95 ~---------------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~  146 (300)
T 2qc5_A           95 T---------------------------EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGS  146 (300)
T ss_dssp             E---------------------------EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTC
T ss_pred             E---------------------------EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCC
Confidence            1                           01111233568899999999988877778899999987 655422 233456


Q ss_pred             ceEEEEEcCCCCEEEccc
Q psy11015        336 AIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~~  353 (360)
                      .+.+++++++|.+.++..
T Consensus       147 ~~~~i~~d~~g~l~v~~~  164 (300)
T 2qc5_A          147 YPAFITLGSDNALWFTEN  164 (300)
T ss_dssp             CEEEEEECTTSSEEEEET
T ss_pred             CceeEEECCCCCEEEEec
Confidence            789999999998766553

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.58  E-value=1.1e-05  Score=72.01  Aligned_cols=142  Identities=16%  Similarity=0.097  Sum_probs=92.1

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC---C-CcCeEEEEEeeCCCEEEEEeCC----CcEEEEEc
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG---H-SGSVNSVRFLPNKDLVLSASGD----KSVHIWQA  251 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~---h-~~~v~~i~~~p~~~~l~s~s~d----~~i~vwd~  251 (360)
                      ...+.+++|++++.++++. .+ .|.+||..+++.......   . ...+++++++|+|+++++...+    +...||.+
T Consensus        89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~  166 (326)
T 2ghs_A           89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV  166 (326)
T ss_dssp             SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred             CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence            4579999999999876654 44 599999988875433221   1 2358899999999977655422    23445544


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECC--CC-e--
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVE--TG-T--  325 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~--~~-~--  325 (360)
                      .++.                             ...+..+......++|+|+|+.++.+ +.++.|.+||+.  +| .  
T Consensus       167 ~~g~-----------------------------~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~  217 (326)
T 2ghs_A          167 AKGK-----------------------------VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG  217 (326)
T ss_dssp             ETTE-----------------------------EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS
T ss_pred             eCCc-----------------------------EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc
Confidence            3331                             11121222356789999999877554 457899999985  56 3  


Q ss_pred             ---EEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        326 ---ILQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       326 ---~~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                         .+..+.........++++++|.+.++.
T Consensus       218 ~~~~~~~~~~~~~~p~gi~~d~~G~lwva~  247 (326)
T 2ghs_A          218 KAEVFIDSTGIKGGMDGSVCDAEGHIWNAR  247 (326)
T ss_dssp             CCEEEEECTTSSSEEEEEEECTTSCEEEEE
T ss_pred             CceEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence               222333344567889999999876654

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.56  E-value=1.4e-06  Score=79.22  Aligned_cols=137  Identities=12%  Similarity=0.121  Sum_probs=98.2

Q ss_pred             EECCCCCEEEEEeC-----CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------CCCcEEEEEc
Q psy11015        187 AVRPGQPVLGSASA-----DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQA  251 (360)
Q Consensus       187 ~~~~~~~~l~sgs~-----Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------~d~~i~vwd~  251 (360)
                      ...|++..++....     ++.|.+.|..+++.+..+.....+ . +.++|+|++++.++          .++.|.+||.
T Consensus        39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~  116 (386)
T 3sjl_D           39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP  116 (386)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred             ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence            34678887777655     679999999999999998855555 4 99999999887765          3678999999


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CC------CCcEEEEEEcCCCCEEEEEEC--CCcEEEEECC
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GH------SNVVIAADWLSDGEQVITASW--DRVANLFDVE  322 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h------~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~  322 (360)
                      .++...                            ..+. +.      ......++|+|||++++.+..  ++.|.++|+.
T Consensus       117 ~t~~v~----------------------------~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~  168 (386)
T 3sjl_D          117 VTLLPT----------------------------ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE  168 (386)
T ss_dssp             TTCCEE----------------------------EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred             CCCeEE----------------------------EEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence            877433                            2221 10      123456899999999988874  6899999999


Q ss_pred             CCeEEEEEecCCC-ce------EEEEEcCCCCEEEccc
Q psy11015        323 TGTILQSLTEPGE-AI------RAAAGRTGGPIRASPL  353 (360)
Q Consensus       323 ~~~~~~~l~~h~~-~v------~~~~~~~~g~~las~~  353 (360)
                      +++.+.++..... .+      .-++.+++|.++.-..
T Consensus       169 t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~  206 (386)
T 3sjl_D          169 GKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAF  206 (386)
T ss_dssp             TTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred             CCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEEC
Confidence            9999988864321 01      1135677777665444

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.56  E-value=2.6e-06  Score=76.68  Aligned_cols=149  Identities=10%  Similarity=-0.023  Sum_probs=98.5

Q ss_pred             CCEEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEEEe-------CCCcCeEEEEEeeCCCEEEEEeC-----CCcE
Q psy11015        181 DGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYS-------GHSGSVNSVRFLPNKDLVLSASG-----DKSV  246 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs--~Dg~v~iwd~~~~~~~~~~~-------~h~~~v~~i~~~p~~~~l~s~s~-----d~~i  246 (360)
                      ..+..++++++|+++++..  .++.++||.+.+++. ..|.       +|-..+..++++|+++++++...     ++.|
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i   95 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL   95 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence            6789999999999888864  234356666555543 3332       24567999999999887766544     5789


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEE---CCCcEEEEECC
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITAS---WDRVANLFDVE  322 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs---~dg~i~iwd~~  322 (360)
                      .+||+.++.....+...                      .....+...+..+++.|++..+ ++.+   .++.|.+||..
T Consensus        96 ~~~d~~tg~~~~~~~~~----------------------~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~  153 (343)
T 2qe8_A           96 VAWDTLNNQLSRVIYLP----------------------PPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ  153 (343)
T ss_dssp             EEEETTTTEEEEEEECC----------------------TTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred             EEEECCCCeEEEEEECC----------------------hhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence            99999877433221000                      0001123456789999865555 5544   57899999999


Q ss_pred             CCeEEEEEecCC-----------------------------CceEEEEEcCCCCEEEcc
Q psy11015        323 TGTILQSLTEPG-----------------------------EAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       323 ~~~~~~~l~~h~-----------------------------~~v~~~~~~~~g~~las~  352 (360)
                      +++....+.+|.                             ..+..++|+|+|..+..+
T Consensus       154 ~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~  212 (343)
T 2qe8_A          154 TGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLS  212 (343)
T ss_dssp             TCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEE
T ss_pred             CCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEE
Confidence            887766554321                             236889999999765543

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.56  E-value=3.3e-06  Score=74.43  Aligned_cols=142  Identities=8%  Similarity=-0.022  Sum_probs=93.3

Q ss_pred             CCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEE-EeC----CCcCeEEEEEeeCCCEEEEEeCC---------
Q psy11015        179 HRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQ-YSG----HSGSVNSVRFLPNKDLVLSASGD---------  243 (360)
Q Consensus       179 h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~-~~~----h~~~v~~i~~~p~~~~l~s~s~d---------  243 (360)
                      +...+.+++++++ +.++++. ..+.|.+||.. ++.... ...    ....+.+++++|+|+++++...+         
T Consensus        69 ~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~  146 (314)
T 1pjx_A           69 YGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR  146 (314)
T ss_dssp             EECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred             CCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence            5567999999999 6545544 44578999998 765433 221    12358899999999888776655         


Q ss_pred             ------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc----CCCCEEEEE-EC
Q psy11015        244 ------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL----SDGEQVITA-SW  312 (360)
Q Consensus       244 ------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s----p~g~~l~tg-s~  312 (360)
                            +.|..||.. +.                             ...+..+......++|+    |+|+.++.+ ..
T Consensus       147 ~~~~~~~~l~~~~~~-g~-----------------------------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~  196 (314)
T 1pjx_A          147 SMQEKFGSIYCFTTD-GQ-----------------------------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP  196 (314)
T ss_dssp             TTSSSCEEEEEECTT-SC-----------------------------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETT
T ss_pred             cccCCCCeEEEECCC-CC-----------------------------EEEeccCCCCcceEEEecccCCCCCEEEEEECC
Confidence                  345555543 21                             11122233456789999    999766555 56


Q ss_pred             CCcEEEEECC-CCeE-----EEEEecCC-CceEEEEEcCCCCEEEcc
Q psy11015        313 DRVANLFDVE-TGTI-----LQSLTEPG-EAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       313 dg~i~iwd~~-~~~~-----~~~l~~h~-~~v~~~~~~~~g~~las~  352 (360)
                      ++.|.+||.. ++..     ...+..+. ..+..++++++|++.++.
T Consensus       197 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~  243 (314)
T 1pjx_A          197 TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN  243 (314)
T ss_dssp             TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred             CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE
Confidence            7899999976 4542     22333333 567899999999877764

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.55  E-value=4.1e-06  Score=73.99  Aligned_cols=151  Identities=12%  Similarity=0.069  Sum_probs=97.2

Q ss_pred             eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe---CC-CcCeEEEEEeeCCCEEEE----EeC--
Q psy11015        173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS---GH-SGSVNSVRFLPNKDLVLS----ASG--  242 (360)
Q Consensus       173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~---~h-~~~v~~i~~~p~~~~l~s----~s~--  242 (360)
                      ...+..+...+.+++++++|+++++...++.|.+|+.. ++......   +. ...+++++++|+|+++++    |..  
T Consensus        78 ~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~  156 (305)
T 3dr2_A           78 VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKP  156 (305)
T ss_dssp             EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCG
T ss_pred             EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccc
Confidence            34555667789999999999877766667899999986 55332221   11 134678999999998886    332  


Q ss_pred             -----------CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        243 -----------DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       243 -----------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                                 .+.|..||..++.                             +..+. .......++|+|+|+.|+.+.
T Consensus       157 ~~~~~~~~~~~~~~v~~~d~~~g~-----------------------------~~~~~-~~~~p~gl~~spdg~~lyv~~  206 (305)
T 3dr2_A          157 SQGCPADPELAHHSVYRLPPDGSP-----------------------------LQRMA-DLDHPNGLAFSPDEQTLYVSQ  206 (305)
T ss_dssp             GGSCCCCCSSSCEEEEEECSSSCC-----------------------------CEEEE-EESSEEEEEECTTSSEEEEEE
T ss_pred             ccccccccccCCCeEEEEcCCCCc-----------------------------EEEEe-cCCCCcceEEcCCCCEEEEEe
Confidence                       2345555554441                             11112 234567899999999887776


Q ss_pred             CC------CcEEEEECCCCeEE--EEE-ecCCCceEEEEEcCCCCEEEcccc
Q psy11015        312 WD------RVANLFDVETGTIL--QSL-TEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       312 ~d------g~i~iwd~~~~~~~--~~l-~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ..      +.|.+|++..+...  ..+ .........++++++|++.++..+
T Consensus       207 ~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~  258 (305)
T 3dr2_A          207 TPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT  258 (305)
T ss_dssp             CCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS
T ss_pred             cCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC
Confidence            65      68999998765411  111 112334556888888887766643

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.47  E-value=1e-05  Score=73.83  Aligned_cols=119  Identities=8%  Similarity=-0.065  Sum_probs=82.3

Q ss_pred             CCCCCEEEEEeC--CC---cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------CCCcEEEEEccc
Q psy11015        189 RPGQPVLGSASA--DR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVI  253 (360)
Q Consensus       189 ~~~~~~l~sgs~--Dg---~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------~d~~i~vwd~~~  253 (360)
                      .|++..++.+..  ..   +|.+||..+++.+..+.....+  .++|+|||+.++.+.          .++.|.+||..+
T Consensus        29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t  106 (373)
T 2mad_H           29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT  106 (373)
T ss_pred             CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence            356666665543  22   8899999999988888754443  999999999988875          367899999876


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEE-E
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQS-L  330 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~-l  330 (360)
                      ......+..                   .......  +......++|+|+|++|++++.  ++.|.++| .+++.+.. +
T Consensus       107 ~~~~~~i~~-------------------~~~~~~~--~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i  164 (373)
T 2mad_H          107 FLPIADIEL-------------------PDAPRFD--VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLL  164 (373)
T ss_pred             CcEEEEEEC-------------------CCccccc--cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEc
Confidence            633321100                   0000000  0123457899999999998874  47899999 99998877 5


Q ss_pred             e
Q psy11015        331 T  331 (360)
Q Consensus       331 ~  331 (360)
                      .
T Consensus       165 ~  165 (373)
T 2mad_H          165 S  165 (373)
T ss_pred             C
Confidence            4

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.39  E-value=2.9e-05  Score=71.44  Aligned_cols=172  Identities=13%  Similarity=0.052  Sum_probs=108.6

Q ss_pred             ccceeeeeeeecCC---CCEEEEEECCCCCEEEEEe-------------------CCCcEEEEECCCCeEEEEEeCC--C
Q psy11015        167 LLSCYKIRSFSGHR---DGVWDVAVRPGQPVLGSAS-------------------ADRTVRLWSTQTGKCVLQYSGH--S  222 (360)
Q Consensus       167 ~~~~~~~~~l~~h~---~~V~~l~~~~~~~~l~sgs-------------------~Dg~v~iwd~~~~~~~~~~~~h--~  222 (360)
                      ..+++.+.++....   .--+.+.|+|+++.+++..                   .+.+|.+||+.+++.+.++.--  .
T Consensus       171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g  250 (462)
T 2ece_A          171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN  250 (462)
T ss_dssp             TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred             CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence            35566666665222   2235678899999888884                   4689999999999888888742  1


Q ss_pred             cCeEEEEE--eeCCCEEEEEe------CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe------
Q psy11015        223 GSVNSVRF--LPNKDLVLSAS------GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL------  288 (360)
Q Consensus       223 ~~v~~i~~--~p~~~~l~s~s------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  288 (360)
                      .....+.|  +|++++++.++      .+++|.+|....+.........               .........+      
T Consensus       251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId---------------i~~~~v~~~lp~~~~~  315 (462)
T 2ece_A          251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE---------------IPAEPLEGNLPEILKP  315 (462)
T ss_dssp             EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE---------------ECCEECCSSCCGGGGG
T ss_pred             CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe---------------CCCccccccccccccc
Confidence            34556666  99999877766      5678888776543211110000               0000000000      


Q ss_pred             -eCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECC---CCeEEEEEecCC--------------CceEEEEEcCCCCEE
Q psy11015        289 -LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVE---TGTILQSLTEPG--------------EAIRAAAGRTGGPIR  349 (360)
Q Consensus       289 -~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~---~~~~~~~l~~h~--------------~~v~~~~~~~~g~~l  349 (360)
                       .+-......+.++|||++|+++.+ .+.|.+||+.   +.+.+..+....              +.-..++++|+|+++
T Consensus       316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~L  395 (462)
T 2ece_A          316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRV  395 (462)
T ss_dssp             GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred             cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEE
Confidence             000234678999999999988876 6889999985   345666554321              124789999999876


Q ss_pred             Eccc
Q psy11015        350 ASPL  353 (360)
Q Consensus       350 as~~  353 (360)
                      ..+.
T Consensus       396 yVaN  399 (462)
T 2ece_A          396 YVTN  399 (462)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            6554

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.39  E-value=1.8e-05  Score=73.17  Aligned_cols=185  Identities=8%  Similarity=-0.071  Sum_probs=117.2

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC-------CcCeEEE
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSV  228 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h-------~~~v~~i  228 (360)
                      +..+.+.+.++..-..+  .++++|+++.++.+.          .++.|.++|..+++.+..+.--       ......+
T Consensus       105 D~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~  182 (426)
T 3c75_H          105 DGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMN  182 (426)
T ss_dssp             ETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGS
T ss_pred             ECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceE
Confidence            34556667777655556  899999999777775          4679999999999988877521       1235678


Q ss_pred             EEeeCCCEEEEEeC--CCcEEEEEcccCeeEeeeCCCCC---------------CCCC-----------------CCC--
Q psy11015        229 RFLPNKDLVLSASG--DKSVHIWQAVINWECLVSNNDND---------------SDLD-----------------ESK--  272 (360)
Q Consensus       229 ~~~p~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~~~~---------------~~~~-----------------~~~--  272 (360)
                      .|+|||++++.+..  ++.|.+.|+.++.....+.....               ....                 ...  
T Consensus       183 ~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~  262 (426)
T 3c75_H          183 ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTE  262 (426)
T ss_dssp             EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCT
T ss_pred             EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC
Confidence            99999999988874  57899999998766544433110               0000                 000  


Q ss_pred             ----------CCCCCcc---ccccceeEeeCC-----------------------CCcEEEEEEcCCCCEEEEEEC----
Q psy11015        273 ----------EPDESSI---TLRTPVKELLGH-----------------------SNVVIAADWLSDGEQVITASW----  312 (360)
Q Consensus       273 ----------~~~~~~~---~~~~~~~~~~~h-----------------------~~~v~~i~~sp~g~~l~tgs~----  312 (360)
                                .......   .....+..+...                       ......++++|+++++++...    
T Consensus       263 ~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~  342 (426)
T 3c75_H          263 DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE  342 (426)
T ss_dssp             TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred             CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence                      0000000   000000111000                       001112688999888766542    


Q ss_pred             ------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEccc
Q psy11015        313 ------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL  353 (360)
Q Consensus       313 ------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~  353 (360)
                            ++.|.++|..+++.+.++... ....+++|+|+|+ .++++.
T Consensus       343 gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n  389 (426)
T 3c75_H          343 WKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALS  389 (426)
T ss_dssp             TCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEE
T ss_pred             ccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEc
Confidence                  357999999999999998643 3578999999998 666654

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.34  E-value=6.4e-08  Score=88.40  Aligned_cols=66  Identities=17%  Similarity=0.065  Sum_probs=46.9

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015        191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       191 ~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      ++..+++++.||.|+.||..+|+.+..+..  +.+.+..+.+++..+++++.|+.+..||..++....
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w   73 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT   73 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee
Confidence            366899999999999999999999988886  556666666678788888899999999998875543

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.34  E-value=8.8e-09  Score=94.13  Aligned_cols=129  Identities=9%  Similarity=0.027  Sum_probs=66.6

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC-eE-EEEEeeCCCEEEEEeCCCc
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-VN-SVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~-v~-~i~~~p~~~~l~s~s~d~~  245 (360)
                      .+++.+-.+..  +.+.+..+..++..+++++.||.|+.||..+|+.+..+..+... +. +..+. .+..+++|+.|+.
T Consensus        27 ~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~  103 (369)
T 2hz6_A           27 RTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDI  103 (369)
T ss_dssp             TTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEE
T ss_pred             CCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCE
Confidence            45555555554  45555555667778888899999999999999887777544221 10 11111 3456778888999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      +..||..+|.....                            +..+.    ...++|++..+++++.|+.|+.||..+|+
T Consensus       104 v~a~D~~tG~~~w~----------------------------~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~  151 (369)
T 2hz6_A          104 WYVIDLLTGEKQQT----------------------------LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE  151 (369)
T ss_dssp             EEEECCC------------------------------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred             EEEEECCCCcEEEE----------------------------ecCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence            99999998844322                            21121    13345688899999999999999999998


Q ss_pred             EEEEEe
Q psy11015        326 ILQSLT  331 (360)
Q Consensus       326 ~~~~l~  331 (360)
                      .+..+.
T Consensus       152 ~~W~~~  157 (369)
T 2hz6_A          152 LRWNAT  157 (369)
T ss_dssp             CCCEEE
T ss_pred             EEEeEe
Confidence            665543

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.33  E-value=8.6e-06  Score=73.94  Aligned_cols=87  Identities=9%  Similarity=-0.130  Sum_probs=67.4

Q ss_pred             cCccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC-------CcCeEE
Q psy11015        165 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNS  227 (360)
Q Consensus       165 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h-------~~~v~~  227 (360)
                      .+..+++.+.++..-..+  .+.++|++..++.+.          .+++|.+||+.+++.+..+...       ......
T Consensus        51 ID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~  128 (368)
T 1mda_H           51 SCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHI  128 (368)
T ss_dssp             EETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTS
T ss_pred             EECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcce
Confidence            345566777777655556  799999999888776          3789999999999999988633       124568


Q ss_pred             EEEeeCCCEEEEEeC--CCcEEE--EEccc
Q psy11015        228 VRFLPNKDLVLSASG--DKSVHI--WQAVI  253 (360)
Q Consensus       228 i~~~p~~~~l~s~s~--d~~i~v--wd~~~  253 (360)
                      +.|+|||++++.+..  +..+.+  +|..+
T Consensus       129 ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          129 IGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             EEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             EEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence            999999999888875  356888  88865

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.30  E-value=1.2e-05  Score=74.42  Aligned_cols=132  Identities=11%  Similarity=0.060  Sum_probs=92.6

Q ss_pred             CCCCEEEEEeC-C----CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------CCCcEEEEEcccC
Q psy11015        190 PGQPVLGSASA-D----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVIN  254 (360)
Q Consensus       190 ~~~~~l~sgs~-D----g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------~d~~i~vwd~~~~  254 (360)
                      +++..++.+.. +    ++|.++|..+++.+..+..-..+  .+.++|||+.++.+.          .++.|.++|..++
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~  159 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF  159 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence            34454444433 3    69999999999999998754444  899999999887775          4678999999877


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-C------CCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCe
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-G------HSNVVIAADWLSDGEQVITASW--DRVANLFDVETGT  325 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~  325 (360)
                      ....                            .+. +      .......+.|+|||++++++..  ++.|.+.|+.+++
T Consensus       160 ~vv~----------------------------~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k  211 (426)
T 3c75_H          160 LPIA----------------------------DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT  211 (426)
T ss_dssp             CEEE----------------------------EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred             cEEE----------------------------EEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence            4332                            221 1      0122346889999999998875  5789999999999


Q ss_pred             EEEEEecCCC-------ceEEEEEcCCCCEEEc
Q psy11015        326 ILQSLTEPGE-------AIRAAAGRTGGPIRAS  351 (360)
Q Consensus       326 ~~~~l~~h~~-------~v~~~~~~~~g~~las  351 (360)
                      .+.++.....       .-.-++++++|.++.-
T Consensus       212 vv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V  244 (426)
T 3c75_H          212 FDRMLDVPDCYHIFPASPTVFYMNCRDGSLARV  244 (426)
T ss_dssp             EEEEEECCSEEEEEEEETTEEEEEETTSSEEEE
T ss_pred             EEEEEEcCCceeeccCCCcEEEEEcCCCCEEEE
Confidence            9888865321       1112566777775543

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.29  E-value=1.2e-05  Score=73.20  Aligned_cols=128  Identities=12%  Similarity=-0.084  Sum_probs=88.8

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC-------CcCeEEE
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSV  228 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h-------~~~v~~i  228 (360)
                      +..+++.+.++..-..+ . ++++|+++.++.++          .++.|.+||..+++.+..+.-.       ......+
T Consensus        65 D~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~  142 (386)
T 3sjl_D           65 DGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMT  142 (386)
T ss_dssp             ETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGE
T ss_pred             ECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceE
Confidence            34566677777655555 4 99999999777765          3678999999999988887521       1245679


Q ss_pred             EEeeCCCEEEEEeC--CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCE
Q psy11015        229 RFLPNKDLVLSASG--DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ  306 (360)
Q Consensus       229 ~~~p~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~  306 (360)
                      .|+|||++++.+..  ++.|.++|+.++...                            .++..- + . ...+....+.
T Consensus       143 a~spDGk~lyVan~~~~~~VsVID~~t~~vv----------------------------~tI~v~-g-~-~~~~P~g~~~  191 (386)
T 3sjl_D          143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK----------------------------RMLDVP-D-C-YHIFPTAPDT  191 (386)
T ss_dssp             EECTTSSEEEEEECSSSCEEEEEETTTTEEE----------------------------EEEECC-S-E-EEEEEEETTE
T ss_pred             EEcCCCCEEEEEEcCCCCeEEEEECCCCcEE----------------------------EEEECC-C-c-ceeecCCCce
Confidence            99999999888764  689999999887433                            222211 1 1 1223334566


Q ss_pred             EEEEECCCcEEEEECCC-CeE
Q psy11015        307 VITASWDRVANLFDVET-GTI  326 (360)
Q Consensus       307 l~tgs~dg~i~iwd~~~-~~~  326 (360)
                      +++.+.||.+.+.++.+ ++.
T Consensus       192 ~~~~~~DG~~~~v~~~~~g~v  212 (386)
T 3sjl_D          192 FFMHCRDGSLAKVAFGTEGTP  212 (386)
T ss_dssp             EEEEETTSCEEEEECCSSSCC
T ss_pred             eEEECCCCCEEEEECCCCCeE
Confidence            77788888888888865 554

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.27  E-value=2.4e-05  Score=77.40  Aligned_cols=139  Identities=11%  Similarity=0.081  Sum_probs=92.5

Q ss_pred             EEEEECCCCCEEEEEeCCCc-------------EEEEECCCCeE--EEEEe--C-CCcCeEEEEEeeCCCEEEEEeC---
Q psy11015        184 WDVAVRPGQPVLGSASADRT-------------VRLWSTQTGKC--VLQYS--G-HSGSVNSVRFLPNKDLVLSASG---  242 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~Dg~-------------v~iwd~~~~~~--~~~~~--~-h~~~v~~i~~~p~~~~l~s~s~---  242 (360)
                      ..++|+ |++.|+.++.+..             |++|++.++..  ...+.  . |...+.++.|+|||++++..+.   
T Consensus       178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~  256 (693)
T 3iuj_A          178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST  256 (693)
T ss_dssp             CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred             ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence            467899 9998888888744             99999987642  33333  3 4456789999999997754332   


Q ss_pred             -CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CC---CcEE
Q psy11015        243 -DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WD---RVAN  317 (360)
Q Consensus       243 -d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~d---g~i~  317 (360)
                       +..+.+||+.++.                           .....+..+....... |+++|..|+..+ .+   +.|.
T Consensus       257 ~~~~i~~~d~~~~~---------------------------~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~  308 (693)
T 3iuj_A          257 SGNRLYVKDLSQEN---------------------------APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLV  308 (693)
T ss_dssp             SCCEEEEEETTSTT---------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEE
T ss_pred             CCcEEEEEECCCCC---------------------------CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEE
Confidence             2478999986541                           1234455565555554 666777665444 33   6799


Q ss_pred             EEECCCCeE--EEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        318 LFDVETGTI--LQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       318 iwd~~~~~~--~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      .||+.++..  ...+..|...+.  .|++++..++...
T Consensus       309 ~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~  344 (693)
T 3iuj_A          309 TVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY  344 (693)
T ss_dssp             EEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEE
T ss_pred             EEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEE
Confidence            999987654  345666666665  8888887666444

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.23  E-value=0.00046  Score=58.89  Aligned_cols=181  Identities=14%  Similarity=0.091  Sum_probs=109.0

Q ss_pred             ceeeeeeeecCCCC--EEEEEECCCCCEEEEEeCCC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CC
Q psy11015        169 SCYKIRSFSGHRDG--VWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GD  243 (360)
Q Consensus       169 ~~~~~~~l~~h~~~--V~~l~~~~~~~~l~sgs~Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d  243 (360)
                      ..+.++++ .|...  ...+.|+ ++.++.+++.+|  .|+++|+.+++.+..+.-. .........++++.++... .+
T Consensus        30 ~~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~  106 (262)
T 3nol_A           30 DYQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKN  106 (262)
T ss_dssp             EEEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSS
T ss_pred             ceEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeC
Confidence            34566666 44433  4788898 667778888776  8999999999988887643 3333322333455555544 58


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCC------CCCCCc-----cccccceeEeeC--CC---CcEEEEEEcCCCCEE
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESK------EPDESS-----ITLRTPVKELLG--HS---NVVIAADWLSDGEQV  307 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~~~--h~---~~v~~i~~sp~g~~l  307 (360)
                      +.+.+||..+......+............      +.....     ......+..+..  ..   ..++.+.|. +|...
T Consensus       107 ~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly  185 (262)
T 3nol_A          107 GLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF  185 (262)
T ss_dssp             SEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred             CEEEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence            89999999988777665543211111100      100110     111122222221  11   234557776 66544


Q ss_pred             EEEECCCcEEEEECCCCeEEEEEecC------------CCceEEEEEcCCCC-EEEccc
Q psy11015        308 ITASWDRVANLFDVETGTILQSLTEP------------GEAIRAAAGRTGGP-IRASPL  353 (360)
Q Consensus       308 ~tgs~dg~i~iwd~~~~~~~~~l~~h------------~~~v~~~~~~~~g~-~las~~  353 (360)
                      +..-.+..|.+.|..+|+.+..+...            ..-.+.+||+|++. +++|+-
T Consensus       186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            44445789999999999999888642            13568999999765 555653

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.20  E-value=0.00017  Score=62.15  Aligned_cols=151  Identities=13%  Similarity=0.026  Sum_probs=97.9

Q ss_pred             ceeeeeeeecCCC--CEEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEEEeC-CCcCeEEEEEeeCCCEE-EEEeC
Q psy11015        169 SCYKIRSFSGHRD--GVWDVAVRPGQPVLGSASA--DRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLV-LSASG  242 (360)
Q Consensus       169 ~~~~~~~l~~h~~--~V~~l~~~~~~~~l~sgs~--Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~~~p~~~~l-~s~s~  242 (360)
                      +.+.+.++ .|..  ....+.|++++.++++.+.  ++.|+++|+.+++.+..+.- .......+++.  +..+ ++.-.
T Consensus         8 ~~~vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~   84 (266)
T 2iwa_A            8 IVEVLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL   84 (266)
T ss_dssp             EEEEEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred             CceEEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence            34556666 3443  3679999998755555543  57999999999998888752 22233455554  4445 44456


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      ++.+.++|..+....                            .++......  ...++++|+.++++..++.|.++|..
T Consensus        85 ~~~v~viD~~t~~v~----------------------------~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~  134 (266)
T 2iwa_A           85 KNIGFIYDRRTLSNI----------------------------KNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPH  134 (266)
T ss_dssp             CSEEEEEETTTTEEE----------------------------EEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTT
T ss_pred             CCEEEEEECCCCcEE----------------------------EEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECC
Confidence            789999998876332                            333211111  12345588877777778999999999


Q ss_pred             CCeEEEEEecCC--C---ceEEEEEcCCCCEEEccc
Q psy11015        323 TGTILQSLTEPG--E---AIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       323 ~~~~~~~l~~h~--~---~v~~~~~~~~g~~las~~  353 (360)
                      +.+.+..+....  .   .++.+.|. +|.+.++..
T Consensus       135 t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~  169 (266)
T 2iwa_A          135 TFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW  169 (266)
T ss_dssp             TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred             CCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC
Confidence            998888776321  1   36677887 676655543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.16  E-value=3.4e-05  Score=76.03  Aligned_cols=129  Identities=14%  Similarity=0.131  Sum_probs=87.7

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEEeCCC-----------cCe------------------------EEEEEeeCCCEE
Q psy11015        193 PVLGSASADRTVRLWSTQTGKCVLQYSGHS-----------GSV------------------------NSVRFLPNKDLV  237 (360)
Q Consensus       193 ~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-----------~~v------------------------~~i~~~p~~~~l  237 (360)
                      ..++.++.+|.+.++|..+|+.+..+....           ..+                        ..++|+|++.++
T Consensus       328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~  407 (677)
T 1kb0_A          328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV  407 (677)
T ss_dssp             EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred             eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence            689999999999999999999887765221           011                        146888888888


Q ss_pred             EEEeCC-------------------------------------------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCC
Q psy11015        238 LSASGD-------------------------------------------KSVHIWQAVINWECLVSNNDNDSDLDESKEP  274 (360)
Q Consensus       238 ~s~s~d-------------------------------------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~  274 (360)
                      ++...+                                           +.|..||+.+++....               
T Consensus       408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~---------------  472 (677)
T 1kb0_A          408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS---------------  472 (677)
T ss_dssp             EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE---------------
T ss_pred             EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEee---------------
Confidence            776543                                           5566677666643322               


Q ss_pred             CCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCC-CceEEEEEcCCCCEEE
Q psy11015        275 DESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG-EAIRAAAGRTGGPIRA  350 (360)
Q Consensus       275 ~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~-~~v~~~~~~~~g~~la  350 (360)
                                   .. +...+.+..+...+..+++|+.||.+++||..+|+.+..+.... ....-+.|..+|...+
T Consensus       473 -------------~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v  535 (677)
T 1kb0_A          473 -------------VE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV  535 (677)
T ss_dssp             -------------EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             -------------cC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence                         11 11223334455678889999999999999999999999987543 2223456667776433

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.09  E-value=0.00031  Score=60.47  Aligned_cols=157  Identities=7%  Similarity=-0.024  Sum_probs=99.0

Q ss_pred             cceeeeeeeec-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        168 LSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       168 ~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      .+++.+.++.- .......+++.. +.+.++.-.++.+.++|..+.+.+..+..-.+.  ...++++|..++.+..++++
T Consensus        52 ~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l  128 (266)
T 2iwa_A           52 QTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSIL  128 (266)
T ss_dssp             TTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEE
T ss_pred             CCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeE
Confidence            34455555431 112223455553 334555556889999999999999988632122  23355688777777788999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-C-CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-G-HSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      .++|..+......                         +..-. + .-..++.+.|. +|...+....++.|.+.|..++
T Consensus       129 ~viD~~t~~v~~~-------------------------I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg  182 (266)
T 2iwa_A          129 YEIDPHTFKLIKK-------------------------HNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDG  182 (266)
T ss_dssp             EEECTTTCCEEEE-------------------------EECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTC
T ss_pred             EEEECCCCcEEEE-------------------------EEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCC
Confidence            9999877633321                         11000 1 11246778888 6744444445789999999999


Q ss_pred             eEEEEEecCC-------------CceEEEEEcCCCC-EEEccc
Q psy11015        325 TILQSLTEPG-------------EAIRAAAGRTGGP-IRASPL  353 (360)
Q Consensus       325 ~~~~~l~~h~-------------~~v~~~~~~~~g~-~las~~  353 (360)
                      +.+..+....             .....++|+|++. +++|+.
T Consensus       183 ~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk  225 (266)
T 2iwa_A          183 TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK  225 (266)
T ss_dssp             CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred             cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence            9998886321             3568999999875 555543

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.07  E-value=8.3e-05  Score=73.39  Aligned_cols=52  Identities=15%  Similarity=0.122  Sum_probs=39.2

Q ss_pred             EEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCC-ceEEEEEcCCCC-EEE
Q psy11015        299 DWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE-AIRAAAGRTGGP-IRA  350 (360)
Q Consensus       299 ~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~-~v~~~~~~~~g~-~la  350 (360)
                      .+...+..+++|+.||.++.||.++|+.+..+..+.+ ...-+.|..+|. +++
T Consensus       481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~  534 (689)
T 1yiq_A          481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT  534 (689)
T ss_dssp             EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             cceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence            4455788999999999999999999999988875432 224466777776 444

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.02  E-value=0.00011  Score=64.90  Aligned_cols=181  Identities=9%  Similarity=-0.038  Sum_probs=104.8

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      +.....+..+...+.++...+++. +..|+.++.+..||.. ++.+..+......+.++.+.+++.+++ ++  +.+..|
T Consensus       126 g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~  200 (330)
T 3hxj_A          126 GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAI  200 (330)
T ss_dssp             SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEE
T ss_pred             CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEE
Confidence            344445555555566777777775 6668888999999998 887777776666677788877777554 44  778899


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCC--CCccccccceeEe----------eCCCCcEEEEEEcCCCCEEEEEECCCcEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPD--ESSITLRTPVKEL----------LGHSNVVIAADWLSDGEQVITASWDRVAN  317 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------~~h~~~v~~i~~sp~g~~l~tgs~dg~i~  317 (360)
                      | .++.....................  .+......-+..+          ......+.++.+. .+..|..++.+|.|.
T Consensus       201 d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~-~~g~l~v~t~~ggl~  278 (330)
T 3hxj_A          201 N-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIG-NTDTIYFGSYDGHLY  278 (330)
T ss_dssp             C-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEEC-TTSCEEEECTTCEEE
T ss_pred             C-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEc-CCCeEEEecCCCCEE
Confidence            8 666555443322111111111100  0000001111222          1111122223332 244777777777777


Q ss_pred             EEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        318 LFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       318 iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      .+| .+++.+..+......+.++...++|.+.+++.++.++
T Consensus       279 ~~d-~~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~  318 (330)
T 3hxj_A          279 AIN-PDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFY  318 (330)
T ss_dssp             EEC-TTSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEE
T ss_pred             EEC-CCCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEE
Confidence            777 7777777776666667777777777777777666543

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.01  E-value=8.9e-05  Score=65.57  Aligned_cols=84  Identities=10%  Similarity=-0.048  Sum_probs=57.1

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      +..+..+..+...+.++.+.+++.+.+ ++  +.+..|| .+++.+..+......+.++...++|. +..++.++.+..+
T Consensus       166 g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~  240 (330)
T 3hxj_A          166 GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAI  240 (330)
T ss_dssp             SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEE
T ss_pred             CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEE
Confidence            445555555556677778877776444 44  8899999 77877777766666788888887775 5556777778888


Q ss_pred             EcccCeeEee
Q psy11015        250 QAVINWECLV  259 (360)
Q Consensus       250 d~~~~~~~~~  259 (360)
                      |. ++.....
T Consensus       241 ~~-~g~~~~~  249 (330)
T 3hxj_A          241 NP-DGTEKWR  249 (330)
T ss_dssp             CT-TSCEEEE
T ss_pred             CC-CCCEeEE
Confidence            74 4444433

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.95  E-value=0.0017  Score=55.64  Aligned_cols=136  Identities=8%  Similarity=-0.101  Sum_probs=87.5

Q ss_pred             CEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCE-EEEEeCCCcEEEEEcccCeeEee
Q psy11015        182 GVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-VLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       182 ~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~-l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      .+.+++|++++. ++++-...+.|.+++...+.....+.........++++|++.. +++....+.|.++++....    
T Consensus        37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~----  112 (267)
T 1npe_A           37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ----  112 (267)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS----
T ss_pred             cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC----
Confidence            567899999655 4555556789999999766544444333356899999997554 4555567789999875321    


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEEC---CCcEEEEECCCCeEEEEEe-cCC
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW---DRVANLFDVETGTILQSLT-EPG  334 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~---dg~i~iwd~~~~~~~~~l~-~h~  334 (360)
                                               ...+ .........++++|++..|+.+..   .+.|..+++.. .....+. ..-
T Consensus       113 -------------------------~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~  166 (267)
T 1npe_A          113 -------------------------RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNL  166 (267)
T ss_dssp             -------------------------CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTC
T ss_pred             -------------------------EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCC
Confidence                                     1111 111245688999997666655554   36788888753 3333332 233


Q ss_pred             CceEEEEEcCCCC
Q psy11015        335 EAIRAAAGRTGGP  347 (360)
Q Consensus       335 ~~v~~~~~~~~g~  347 (360)
                      .....+++++++.
T Consensus       167 ~~P~gia~d~~~~  179 (267)
T 1npe_A          167 GLPNGLTFDAFSS  179 (267)
T ss_dssp             SCEEEEEEETTTT
T ss_pred             CCCcEEEEcCCCC
Confidence            4578899999764

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.95  E-value=0.0017  Score=54.85  Aligned_cols=155  Identities=6%  Similarity=0.025  Sum_probs=97.0

Q ss_pred             cceeeeeeeecCCCC-EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        168 LSCYKIRSFSGHRDG-VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~-V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      .+++.++.+.-.... --.+++.. +.+....-.++.+.+||..+.+.+.++.. .+.-+.++  +++..|+.+..++.|
T Consensus        51 ~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~l  126 (243)
T 3mbr_X           51 ETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPRARFRY-PGEGWALT--SDDSHLYMSDGTAVI  126 (243)
T ss_dssp             TTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEEEEEEC-SSCCCEEE--ECSSCEEEECSSSEE
T ss_pred             CCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEEEEEeC-CCCceEEe--eCCCEEEEECCCCeE
Confidence            344555544322211 12334432 33455556788999999999999999873 33334554  477777777778999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---CcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      .++|..+......                         +. ...+.   ..++.+.|. +|+..+..-.+..|.+.|..+
T Consensus       127 ~~iDp~t~~~~~~-------------------------I~-V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t  179 (243)
T 3mbr_X          127 RKLDPDTLQQVGS-------------------------IK-VTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS  179 (243)
T ss_dssp             EEECTTTCCEEEE-------------------------EE-CEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred             EEEeCCCCeEEEE-------------------------EE-EccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence            9999887643321                         11 11111   245667765 565444443578899999999


Q ss_pred             CeEEEEEecC-------------CCceEEEEEcCCC-CEEEccc
Q psy11015        324 GTILQSLTEP-------------GEAIRAAAGRTGG-PIRASPL  353 (360)
Q Consensus       324 ~~~~~~l~~h-------------~~~v~~~~~~~~g-~~las~~  353 (360)
                      |+.+..+.-.             ..-.+.+|++|++ ++++|+-
T Consensus       180 G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          180 GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            9999887622             1356899999965 5666654

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.94  E-value=5e-05  Score=75.83  Aligned_cols=142  Identities=11%  Similarity=0.055  Sum_probs=86.5

Q ss_pred             CEEEEEEC-CCCCEEEEEe-CCC----cEEEEECCCC-eEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCC-----cEEE
Q psy11015        182 GVWDVAVR-PGQPVLGSAS-ADR----TVRLWSTQTG-KCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHI  248 (360)
Q Consensus       182 ~V~~l~~~-~~~~~l~sgs-~Dg----~v~iwd~~~~-~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~-----~i~v  248 (360)
                      .+...+|+ |||+.|+-+. .+|    +|+++|+.++ +.+. .+.   .....+.|+|||+.|+....|.     .|.+
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            67888999 9999776543 333    5999999988 6321 111   1134688999998777766552     4666


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC---CCcEEEEECCCC
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW---DRVANLFDVETG  324 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~---dg~i~iwd~~~~  324 (360)
                      +++.++..                          .....+. .+.....++.|+|||++|+..+.   ...|.++|+.++
T Consensus       252 ~~lgt~~~--------------------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          252 HVMGKLQS--------------------------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             EETTSCGG--------------------------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             EECCCCch--------------------------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            66654411                          0111111 22345668899999999876553   345888898765


Q ss_pred             --eE-EEEE-ecCCCceEEEEEcCCCCEEEcc
Q psy11015        325 --TI-LQSL-TEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       325 --~~-~~~l-~~h~~~v~~~~~~~~g~~las~  352 (360)
                        .. +..+ ........++.|+.++.+++.+
T Consensus       306 ~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t  337 (751)
T 2xe4_A          306 NAHNTLEIVRPREKGVRYDVQMHGTSHLVILT  337 (751)
T ss_dssp             TTCCCEEESSCCCTTCCEEEEEETTTEEEEEE
T ss_pred             CCCceeEEeecCCCCceEEEeeeeCCEEEEEe
Confidence              22 1333 2344556666666555554443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.93  E-value=0.0015  Score=55.67  Aligned_cols=158  Identities=12%  Similarity=-0.020  Sum_probs=101.0

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      +..+++.++.+-+..-.--.+++..+ .+....-.++.+.+||..+.+.+.++.. .+.-+.++  +++..|+.+..++.
T Consensus        81 D~~Tgkv~~~~l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~  156 (268)
T 3nok_A           81 SLESAQPVWMERLGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTRY-SGEGWGLC--YWNGKLVRSDGGTM  156 (268)
T ss_dssp             CSSCSSCSEEEECTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEEC-SSCCCCEE--EETTEEEEECSSSE
T ss_pred             ECCCCcEEeEECCCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEeC-CCceeEEe--cCCCEEEEECCCCE
Confidence            34455555554111111233555432 3555566789999999999999999874 33334555  47788877778999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---CcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      |.++|..+......                         +. ...+.   ..++.+.|. +|...+..-.+..|.+.|..
T Consensus       157 l~~iDp~T~~v~~~-------------------------I~-V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~  209 (268)
T 3nok_A          157 LTFHEPDGFALVGA-------------------------VQ-VKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA  209 (268)
T ss_dssp             EEEECTTTCCEEEE-------------------------EE-CEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred             EEEEcCCCCeEEEE-------------------------EE-eCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence            99999887643322                         11 11111   245677777 67544444457899999999


Q ss_pred             CCeEEEEEecC-------------CCceEEEEEcCCC-CEEEcccc
Q psy11015        323 TGTILQSLTEP-------------GEAIRAAAGRTGG-PIRASPLL  354 (360)
Q Consensus       323 ~~~~~~~l~~h-------------~~~v~~~~~~~~g-~~las~~~  354 (360)
                      +|+.+..+.-.             ..-.+.+||+|++ ++++|+-.
T Consensus       210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~  255 (268)
T 3nok_A          210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL  255 (268)
T ss_dssp             TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred             CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence            99998887632             1356899999964 57777643

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.92  E-value=0.00022  Score=65.68  Aligned_cols=133  Identities=11%  Similarity=0.108  Sum_probs=91.5

Q ss_pred             CCCC-EEEEEeCCCcEEEEECCCC----eEEEEEe-------CCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEEc
Q psy11015        190 PGQP-VLGSASADRTVRLWSTQTG----KCVLQYS-------GHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQA  251 (360)
Q Consensus       190 ~~~~-~l~sgs~Dg~v~iwd~~~~----~~~~~~~-------~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd~  251 (360)
                      ++++ ++++|-.++.|.|+|+.+.    +...++.       ........+...|+| +++++..+      +.|.++|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            6666 4555667889999999765    6666663       111245678888999 77776665      78999998


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCC-CcEEEEEEcCCCCEEEEEEC----------------
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHS-NVVIAADWLSDGEQVITASW----------------  312 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~-~~v~~i~~sp~g~~l~tgs~----------------  312 (360)
                      .+....                            .+..  +.. ..-..+-|+|+++.+++..+                
T Consensus       172 ~T~~v~----------------------------~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~  223 (462)
T 2ece_A          172 YSFEPL----------------------------GKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLK  223 (462)
T ss_dssp             TTCCEE----------------------------EECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHH
T ss_pred             CCCeEE----------------------------EEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhh
Confidence            876433                            2222  111 12235778999999998863                


Q ss_pred             ---CCcEEEEECCCCeEEEEEecC-C-CceEEEEE--cCCCCEEEc
Q psy11015        313 ---DRVANLFDVETGTILQSLTEP-G-EAIRAAAG--RTGGPIRAS  351 (360)
Q Consensus       313 ---dg~i~iwd~~~~~~~~~l~~h-~-~~v~~~~~--~~~g~~las  351 (360)
                         +.+|.+||+.+++.+.++... . .....+.|  +|+|+++..
T Consensus       224 ~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV  269 (462)
T 2ece_A          224 DRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFI  269 (462)
T ss_dssp             HHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEE
T ss_pred             hccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEE
Confidence               689999999999988888753 1 23445555  999986543

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.90  E-value=0.002  Score=54.33  Aligned_cols=147  Identities=11%  Similarity=0.015  Sum_probs=93.8

Q ss_pred             eeeeeeeecCCC--CEEEEEECCCCCEEEEEeCCC--cEEEEECCCCeEEEEEeCCCc-CeEEEEEeeCCCEE-EEEeCC
Q psy11015        170 CYKIRSFSGHRD--GVWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSG-SVNSVRFLPNKDLV-LSASGD  243 (360)
Q Consensus       170 ~~~~~~l~~h~~--~V~~l~~~~~~~~l~sgs~Dg--~v~iwd~~~~~~~~~~~~h~~-~v~~i~~~p~~~~l-~s~s~d  243 (360)
                      .+.++++ .|..  -...+.|++ +.++.+.+.+|  .|+++|+.+++.+..+.-... .-..+++  .++.+ ...-.+
T Consensus         9 ~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw~~   84 (243)
T 3mbr_X            9 YRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLTWRN   84 (243)
T ss_dssp             EEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSS
T ss_pred             eEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEEeeC
Confidence            4556666 5543  466899987 55777777764  899999999998888763222 1233444  34444 444568


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET  323 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~  323 (360)
                      +.+.+||..+...                            +.++.... .=+.++  +++..|+.+..++.|.++|..+
T Consensus        85 ~~v~v~D~~tl~~----------------------------~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t  133 (243)
T 3mbr_X           85 HEGFVYDLATLTP----------------------------RARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDT  133 (243)
T ss_dssp             SEEEEEETTTTEE----------------------------EEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTT
T ss_pred             CEEEEEECCcCcE----------------------------EEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCC
Confidence            8999999987643                            33333211 113444  4677777777789999999999


Q ss_pred             CeEEEEEecCC-----CceEEEEEcCCCCEEEcc
Q psy11015        324 GTILQSLTEPG-----EAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       324 ~~~~~~l~~h~-----~~v~~~~~~~~g~~las~  352 (360)
                      .+.+.++....     ..++.+.|. +|.+.|..
T Consensus       134 ~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv  166 (243)
T 3mbr_X          134 LQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV  166 (243)
T ss_dssp             CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred             CeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence            98888775421     234555555 55555443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.90  E-value=0.00058  Score=58.29  Aligned_cols=147  Identities=10%  Similarity=0.025  Sum_probs=95.2

Q ss_pred             eeeeeeecCC--CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEE
Q psy11015        171 YKIRSFSGHR--DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVH  247 (360)
Q Consensus       171 ~~~~~l~~h~--~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~  247 (360)
                      +.+.++ .|.  .-...+.|+. +.++.+.+.+|.|+++|+.+++.+..+-+....-..+++  +++.| +..-.++.+.
T Consensus        44 ~Vv~~~-phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~--~g~~Ly~ltw~~~~v~  119 (268)
T 3nok_A           44 HIIREY-PHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLAS--DGERLYQLTWTEGLLF  119 (268)
T ss_dssp             EEEEEE-ECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEE--CSSCEEEEESSSCEEE
T ss_pred             EEEEEE-cCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEE--eCCEEEEEEccCCEEE
Confidence            455566 343  3347888874 568888889999999999999877776211112233555  44444 4445688999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +||..+....                            .++..- ..-+.++  +++..|+.+..++.|.++|..+.+.+
T Consensus       120 V~D~~Tl~~~----------------------------~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~  168 (268)
T 3nok_A          120 TWSGMPPQRE----------------------------RTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALV  168 (268)
T ss_dssp             EEETTTTEEE----------------------------EEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEE
T ss_pred             EEECCcCcEE----------------------------EEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEE
Confidence            9999877433                            333311 1113444  47888887777899999999999988


Q ss_pred             EEEecC--CC---ceEEEEEcCCCCEEEccc
Q psy11015        328 QSLTEP--GE---AIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       328 ~~l~~h--~~---~v~~~~~~~~g~~las~~  353 (360)
                      .++...  ..   .++.+.|. +|.+.|..+
T Consensus       169 ~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw  198 (268)
T 3nok_A          169 GAVQVKLRGQPVELINELECA-NGVIYANIW  198 (268)
T ss_dssp             EEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred             EEEEeCCCCcccccccccEEe-CCEEEEEEC
Confidence            877542  22   34566776 666665543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.90  E-value=5.8e-05  Score=71.83  Aligned_cols=153  Identities=10%  Similarity=-0.032  Sum_probs=99.5

Q ss_pred             EEEEECCCCCEEEEEeCCC--------------------------------------cEEEEECCC--CeE-EEEEeCCC
Q psy11015        184 WDVAVRPGQPVLGSASADR--------------------------------------TVRLWSTQT--GKC-VLQYSGHS  222 (360)
Q Consensus       184 ~~l~~~~~~~~l~sgs~Dg--------------------------------------~v~iwd~~~--~~~-~~~~~~h~  222 (360)
                      ..++++|+|.++++.+.+.                                      .|.|.|..+  +.. +..+. -.
T Consensus       198 d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg  276 (595)
T 1fwx_A          198 DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IA  276 (595)
T ss_dssp             CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EE
T ss_pred             cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cC
Confidence            4567899999888888653                                      466777776  444 44444 22


Q ss_pred             cCeEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        223 GSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       223 ~~v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      ....++.++|||+++++++ .+.+|.++|+.+........                ............ -......++|+
T Consensus       277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~----------------l~~~~~v~~~v~-vG~gP~h~aF~  339 (595)
T 1fwx_A          277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN----------------ADPRSAVVAEPE-LGLGPLHTAFD  339 (595)
T ss_dssp             SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC----------------CCGGGGEEECCB-CCSCEEEEEEC
T ss_pred             CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccc----------------cCcccceEEEcC-CCCCcceEEEC
Confidence            3567899999999776654 68899999998542110000                000001122222 23467899999


Q ss_pred             CCCCEEE-EEECCCcEEEEECCC----------CeEEEEEecCCCce-E----EEEEcCCCCEEEccccc
Q psy11015        302 SDGEQVI-TASWDRVANLFDVET----------GTILQSLTEPGEAI-R----AAAGRTGGPIRASPLLL  355 (360)
Q Consensus       302 p~g~~l~-tgs~dg~i~iwd~~~----------~~~~~~l~~h~~~v-~----~~~~~~~g~~las~~~~  355 (360)
                      |+| +++ +.-.|+.|.+||+.+          .+.+..+..|-.+- .    ++..+|+|+++.++...
T Consensus       340 ~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~  408 (595)
T 1fwx_A          340 GRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF  408 (595)
T ss_dssp             TTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred             CCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence            999 554 556799999999877          56778887765432 1    22458999999887643

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=97.74  E-value=8.2e-05  Score=67.48  Aligned_cols=105  Identities=11%  Similarity=-0.109  Sum_probs=76.2

Q ss_pred             EEEEEeCCC----cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------CCCcEEEEEcccCeeEee
Q psy11015        194 VLGSASADR----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVINWECLV  259 (360)
Q Consensus       194 ~l~sgs~Dg----~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------~d~~i~vwd~~~~~~~~~  259 (360)
                      .+++...++    +|.+.|..+++.+..+.....+  .+.++|+++.++.+.          .+++|.+||+.++...  
T Consensus        34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv--  109 (368)
T 1mda_H           34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI--  109 (368)
T ss_dssp             EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE--
T ss_pred             EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE--
Confidence            444444444    8889999999999998755555  799999999888876          3688999999887433  


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCC-------CCcEEEEEEcCCCCEEEEEEC--CCcEEE--EECCCCeEEE
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGH-------SNVVIAADWLSDGEQVITASW--DRVANL--FDVETGTILQ  328 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~i~~sp~g~~l~tgs~--dg~i~i--wd~~~~~~~~  328 (360)
                                                .++..+       ......++++|||++++++..  +..+.+  +|..+   +.
T Consensus       110 --------------------------~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~  160 (368)
T 1mda_H          110 --------------------------ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQ  160 (368)
T ss_dssp             --------------------------EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EE
T ss_pred             --------------------------EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ce
Confidence                                      333211       123456899999999998875  356888  99877   44


Q ss_pred             EEe
Q psy11015        329 SLT  331 (360)
Q Consensus       329 ~l~  331 (360)
                      ++.
T Consensus       161 ~i~  163 (368)
T 1mda_H          161 LTK  163 (368)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            443

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.67  E-value=0.012  Score=50.21  Aligned_cols=135  Identities=9%  Similarity=-0.009  Sum_probs=86.7

Q ss_pred             CCEEEEEECCCCCEEEEEeC---CCcEEEEECCCCeEEEEE-eCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEEEcccCe
Q psy11015        181 DGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINW  255 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~---Dg~v~iwd~~~~~~~~~~-~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~~~  255 (360)
                      .....++++|++..|+.+..   .+.|..++++... ...+ .........++++|++..| ++-...+.|.++|+....
T Consensus       122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~  200 (267)
T 1npe_A          122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG  200 (267)
T ss_dssp             SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred             CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence            46789999996555554443   3688888876432 2223 2333568899999987655 555566889999986431


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEecCC
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~  334 (360)
                      ..                            ..+.+ .....+++.  ++..++.+. .++.|..+|..+++.+..+....
T Consensus       201 ~~----------------------------~~~~~-~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~  249 (267)
T 1npe_A          201 RR----------------------------KVLEG-LQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK  249 (267)
T ss_dssp             EE----------------------------EEEEC-CCSEEEEEE--ETTEEEEEETTTTEEEEEETTTTEEEEEECCSS
T ss_pred             eE----------------------------EEecC-CCCceEEEE--eCCEEEEEECCCCeEEEEeCCCCCceEEEcccc
Confidence            11                            11111 123456665  355665555 45899999999999988886443


Q ss_pred             -CceEEEEEcCCCC
Q psy11015        335 -EAIRAAAGRTGGP  347 (360)
Q Consensus       335 -~~v~~~~~~~~g~  347 (360)
                       .....+++.|++.
T Consensus       250 ~~~p~gi~~~~~~~  263 (267)
T 1npe_A          250 QTRLYGITIALSQC  263 (267)
T ss_dssp             CCCCCCEEEECSCC
T ss_pred             ccccceeeecCccC
Confidence             2467788888764

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.67  E-value=0.0018  Score=63.90  Aligned_cols=76  Identities=11%  Similarity=0.082  Sum_probs=57.3

Q ss_pred             EEEECCCCCEEEEEeCCCc-------------------EEEEECCCCeEEEEEeC--CC-------cCeEEEEEeeCCC-
Q psy11015        185 DVAVRPGQPVLGSASADRT-------------------VRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNKD-  235 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~Dg~-------------------v~iwd~~~~~~~~~~~~--h~-------~~v~~i~~~p~~~-  235 (360)
                      .++++|+...++.++.++.                   |..||..+|+.+..++.  |.       ..+.......+|. 
T Consensus       239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~  318 (689)
T 1yiq_A          239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP  318 (689)
T ss_dssp             CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred             ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence            5788898889999988764                   99999999999988874  21       1222223333665 


Q ss_pred             --EEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        236 --LVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       236 --~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                        .++.++.+|.++++|..+|......
T Consensus       319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~  345 (689)
T 1yiq_A          319 RKVLMQAPKNGFFYVIDRATGELLSAK  345 (689)
T ss_dssp             EEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred             EEEEEEECCCCeEEEEECCCCCEeccc
Confidence              7888999999999999999876543

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=97.62  E-value=0.0012  Score=59.79  Aligned_cols=133  Identities=8%  Similarity=0.066  Sum_probs=88.1

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES  271 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  271 (360)
                      +..++.++.++.+..+|..+|+.+.....  +....+..  ++..++.++.++.+..+|..++........         
T Consensus       239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~---------  305 (376)
T 3q7m_A          239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSD---------  305 (376)
T ss_dssp             TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECT---------
T ss_pred             CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecc---------
Confidence            45788888899999999999988776652  33444444  466788888999999999998855433110         


Q ss_pred             CCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEc
Q psy11015        272 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las  351 (360)
                                        .....+.....  .+..|+.++.+|.+..+|..+|+.+.........+.+.....++.+++.
T Consensus       306 ------------------~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~  365 (376)
T 3q7m_A          306 ------------------LLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQ  365 (376)
T ss_dssp             ------------------TTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEE
T ss_pred             ------------------cCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEE
Confidence                              00111111222  2568888999999999999999988877654444433222236666666


Q ss_pred             ccccch
Q psy11015        352 PLLLAI  357 (360)
Q Consensus       352 ~~~~~i  357 (360)
                      +.++.+
T Consensus       366 ~~~G~l  371 (376)
T 3q7m_A          366 AKDGTV  371 (376)
T ss_dssp             BTTSCE
T ss_pred             eCCCEE
Confidence            655543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=97.60  E-value=0.0016  Score=64.16  Aligned_cols=77  Identities=9%  Similarity=0.062  Sum_probs=58.4

Q ss_pred             EEEECCCCCEEEEEeCCC-------------------cEEEEECCCCeEEEEEeC--CC-------cCeEEEEEeeCC--
Q psy11015        185 DVAVRPGQPVLGSASADR-------------------TVRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNK--  234 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~Dg-------------------~v~iwd~~~~~~~~~~~~--h~-------~~v~~i~~~p~~--  234 (360)
                      .++++|++..++.++.++                   +|..+|..+|+.+..++.  |.       ....-+....+|  
T Consensus       247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~  326 (677)
T 1kb0_A          247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP  326 (677)
T ss_dssp             CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred             ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence            568889888888887664                   599999999999888774  21       122333444477  


Q ss_pred             -CEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        235 -DLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       235 -~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                       ..++.++.+|.+.++|..+|.......
T Consensus       327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~~  354 (677)
T 1kb0_A          327 RKVILHAPKNGFFFVLDRTNGKFISAKN  354 (677)
T ss_dssp             EEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred             eeEEEEECCCCEEEEEECCCCCEecccc
Confidence             688999999999999999998776543

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.58  E-value=0.0029  Score=55.92  Aligned_cols=141  Identities=11%  Similarity=0.031  Sum_probs=85.5

Q ss_pred             CCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeC-----CCcCeEEEEEee-CCCEEEEEeC-----------
Q psy11015        181 DGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSG-----HSGSVNSVRFLP-NKDLVLSASG-----------  242 (360)
Q Consensus       181 ~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-----h~~~v~~i~~~p-~~~~l~s~s~-----------  242 (360)
                      +.+.++++.+ ++ .|+.+...+.|..+|..++.. ..+..     .......+++.| +|++.++-..           
T Consensus        80 ~~p~gi~~~~~~g-~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~  157 (322)
T 2fp8_A           80 GRTYDISYNLQNN-QLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI  157 (322)
T ss_dssp             CCEEEEEEETTTT-EEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred             CCCceEEEcCCCC-cEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence            3578999998 55 455555555688888775532 22221     113478899999 8987776533           


Q ss_pred             ------CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCc
Q psy11015        243 ------DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRV  315 (360)
Q Consensus       243 ------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~  315 (360)
                            ++.|..||..++..                             ..+...-.....++|+|+|++|+.+ +.++.
T Consensus       158 ~~~~~~~g~v~~~d~~~~~~-----------------------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~  208 (322)
T 2fp8_A          158 MDTSDKTGRLIKYDPSTKET-----------------------------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQ  208 (322)
T ss_dssp             HHHTCCCEEEEEEETTTTEE-----------------------------EEEEEEESCCCEEEECTTSSEEEEEEGGGTE
T ss_pred             hcccCCCceEEEEeCCCCEE-----------------------------EEeccCCccCcceEECCCCCEEEEEeCCCCe
Confidence                  25677777654421                             1111111234578999999977655 45688


Q ss_pred             EEEEECCCCe--EEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        316 ANLFDVETGT--ILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       316 i~iwd~~~~~--~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      |.+|++....  ....+....+ ...++++++|++.++..
T Consensus       209 I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~  247 (322)
T 2fp8_A          209 IVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS  247 (322)
T ss_dssp             EEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred             EEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence            9999987421  1112211223 67889999988666543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.56  E-value=0.0036  Score=59.67  Aligned_cols=159  Identities=10%  Similarity=0.040  Sum_probs=97.4

Q ss_pred             CCEEEEEE-C-CCCCEEEEEe------------------CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE
Q psy11015        181 DGVWDVAV-R-PGQPVLGSAS------------------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA  240 (360)
Q Consensus       181 ~~V~~l~~-~-~~~~~l~sgs------------------~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~  240 (360)
                      .....+++ + |++.+++.++                  .++.+.+.|.++.+.+.++.-- +....++++|+|+++++.
T Consensus       134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt  212 (595)
T 1fwx_A          134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFST  212 (595)
T ss_dssp             CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEE
T ss_pred             CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeC-CCccceEECCCCCEEEEE
Confidence            35778887 5 8999888885                  3467999999999888887632 245678899999999888


Q ss_pred             eCCC---------------cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccc--ccc-eeEeeCCCCcEEEEEEcC
Q psy11015        241 SGDK---------------SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITL--RTP-VKELLGHSNVVIAADWLS  302 (360)
Q Consensus       241 s~d~---------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~h~~~v~~i~~sp  302 (360)
                      +.+.               .+.+.|..........   .  .......-.......  ... +..+.. .....++.++|
T Consensus       213 ~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~---G--k~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sP  286 (595)
T 1fwx_A          213 SYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA---G--DYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAP  286 (595)
T ss_dssp             ESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH---T--CSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECT
T ss_pred             ecCcccCcchhhccccccceEEEeeccceeEeccC---C--CeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcC
Confidence            8653               3666665432211000   0  000000000000000  111 222221 12345789999


Q ss_pred             CCCEEEEEE-CCCcEEEEECCCCe------------EEEEEecCCCceEEEEEcCCCC
Q psy11015        303 DGEQVITAS-WDRVANLFDVETGT------------ILQSLTEPGEAIRAAAGRTGGP  347 (360)
Q Consensus       303 ~g~~l~tgs-~dg~i~iwd~~~~~------------~~~~l~~h~~~v~~~~~~~~g~  347 (360)
                      ||++++.++ .+.+|.++|+.+.+            .+..+. -......++|+|+|.
T Consensus       287 DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~  343 (595)
T 1fwx_A          287 DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGN  343 (595)
T ss_dssp             TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSE
T ss_pred             CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCe
Confidence            999876554 67899999998653            334443 345678999999994

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.54  E-value=0.0031  Score=58.41  Aligned_cols=137  Identities=14%  Similarity=0.078  Sum_probs=85.8

Q ss_pred             CEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CC----cEEEEEcccCe
Q psy11015        182 GVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK----SVHIWQAVINW  255 (360)
Q Consensus       182 ~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~----~i~vwd~~~~~  255 (360)
                      ....|+++| ++..|+.+...+.|+.+|+..+....... .......|+|+++|+.|+.+.. ++    .+.+++.....
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~  216 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF  216 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence            457889998 45566666655889999998776544443 4556899999999995555543 22    23333322110


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEEec-C
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTE-P  333 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~-h  333 (360)
                                                 .....+.. ......++++| +|..+++-..++.|..|+..++........ .
T Consensus       217 ---------------------------~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~  268 (430)
T 3tc9_A          217 ---------------------------KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD  268 (430)
T ss_dssp             ---------------------------CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred             ---------------------------eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC
Confidence                                       00111111 22345788999 676666666778999999887764332222 2


Q ss_pred             CCceEEEEEcCCCC
Q psy11015        334 GEAIRAAAGRTGGP  347 (360)
Q Consensus       334 ~~~v~~~~~~~~g~  347 (360)
                      ......++|+|+|+
T Consensus       269 ~~~P~gia~~pdG~  282 (430)
T 3tc9_A          269 SGWEFHIQFHPSGN  282 (430)
T ss_dssp             SSCCEEEEECTTSS
T ss_pred             CCcceeEEEcCCCC
Confidence            23467899999998

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=97.50  E-value=0.0029  Score=57.08  Aligned_cols=110  Identities=12%  Similarity=0.021  Sum_probs=75.1

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCC---------cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHS---------GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNN  262 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~---------~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~  262 (360)
                      +..++.++.++.|..+|..+|+.+..+....         ..+.+. ...++..++.++.++.+..+|..++........
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~  131 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV  131 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence            5588888999999999999999887776421         222222 222456788889999999999998865543211


Q ss_pred             CCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        263 DNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                      ..                        .....++    .  .+..++.++.+|.|..+|..+|+.+.....
T Consensus       132 ~~------------------------~~~~~p~----~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~  171 (376)
T 3q7m_A          132 AG------------------------EALSRPV----V--SDGLVLIHTSNGQLQALNEADGAVKWTVNL  171 (376)
T ss_dssp             SS------------------------CCCSCCE----E--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CC------------------------ceEcCCE----E--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence            00                        0011111    1  245788888999999999999988776654

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.49  E-value=0.018  Score=49.12  Aligned_cols=158  Identities=8%  Similarity=0.120  Sum_probs=99.2

Q ss_pred             eeeecCCCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      +.+.|-.+.+..++|+|++.. ++....++.|...|.. ++.+..+. +-......|++.+++.++++.-.++.+.++++
T Consensus        20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v   98 (255)
T 3qqz_A           20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL   98 (255)
T ss_dssp             EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred             eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence            456676678999999998664 4457778899999988 88777764 22256889999988887777667788999987


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC---CCeEEE
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE---TGTILQ  328 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~---~~~~~~  328 (360)
                      .........                  .....++. .........+++|.|.++.|+++.......+|.+.   .+..+.
T Consensus        99 ~~~~~i~~~------------------~~~~~~~~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~  159 (255)
T 3qqz_A           99 TPNSEVKIL------------------KKIKIPLQ-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH  159 (255)
T ss_dssp             CTTCCEEEE------------------EEEECCCS-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE
T ss_pred             CCCCeeeee------------------eeeccccc-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee
Confidence            654321100                  00000000 01234567899999999888877766555555543   111222


Q ss_pred             EEec-------CCCceEEEEEcCC-CCEEEc
Q psy11015        329 SLTE-------PGEAIRAAAGRTG-GPIRAS  351 (360)
Q Consensus       329 ~l~~-------h~~~v~~~~~~~~-g~~las  351 (360)
                      .+..       +-..+.+++++|. |.+++.
T Consensus       160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliL  190 (255)
T 3qqz_A          160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVL  190 (255)
T ss_dssp             EEECHHHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred             eecchhhccccccCCceeEEEcCCCCeEEEE
Confidence            2211       2235678888885 444443

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.43  E-value=0.0033  Score=60.55  Aligned_cols=51  Identities=18%  Similarity=0.142  Sum_probs=35.6

Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc-eEEEEEcCCCCEEEccc
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTEPGEA-IRAAAGRTGGPIRASPL  353 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~-v~~~~~~~~g~~las~~  353 (360)
                      .+..++.++.||.|+.||.++|+.+..+...... -..+.+..+|.++++..
T Consensus       474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~  525 (571)
T 2ad6_A          474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM  525 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred             CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence            4677888999999999999999999888743221 12234556776555433

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.43  E-value=0.0069  Score=53.43  Aligned_cols=141  Identities=16%  Similarity=0.094  Sum_probs=90.3

Q ss_pred             CEEEEEECC-CCCEEEEEeC-----------------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE-eC
Q psy11015        182 GVWDVAVRP-GQPVLGSASA-----------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SG  242 (360)
Q Consensus       182 ~V~~l~~~~-~~~~l~sgs~-----------------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~-s~  242 (360)
                      ....+++.+ +|.+.++-..                 ++.|..||..+++......+ -.....|+|+|+|+.++.+ +.
T Consensus       127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~  205 (322)
T 2fp8_A          127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFL  205 (322)
T ss_dssp             CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGG
T ss_pred             ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCC
Confidence            478899999 8987666432                 36788899877764333222 2345689999999865544 56


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC----------
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW----------  312 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~----------  312 (360)
                      .+.|.+|++.....                         . ....+....+ ...+++.++|++.++...          
T Consensus       206 ~~~I~~~~~~~~~~-------------------------~-~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~  258 (322)
T 2fp8_A          206 SHQIVKYWLEGPKK-------------------------G-TAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRV  258 (322)
T ss_dssp             GTEEEEEESSSTTT-------------------------T-CEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCE
T ss_pred             CCeEEEEECCCCcC-------------------------C-ccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCC
Confidence            68899998764200                         0 0111111123 678999999987666544          


Q ss_pred             CCcEEEEECCCCeEEEEEecCC----CceEEEEEcCCCCEEEcc
Q psy11015        313 DRVANLFDVETGTILQSLTEPG----EAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       313 dg~i~iwd~~~~~~~~~l~~h~----~~v~~~~~~~~g~~las~  352 (360)
                      .+.|..+|. .|+.+..+....    ..++++++. +|.+.+++
T Consensus       259 ~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~  300 (322)
T 2fp8_A          259 DPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGT  300 (322)
T ss_dssp             EEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEE-TTEEEEEC
T ss_pred             ccEEEEECC-CCCEEEEEECCCCCccccceEEEEe-CCEEEEee
Confidence            467888886 477777776442    346777774 56655554

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.40  E-value=0.033  Score=55.73  Aligned_cols=147  Identities=13%  Similarity=0.028  Sum_probs=97.0

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC--------CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--------HSGSVNSVRFLPNKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~--------h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~  251 (360)
                      ...|.++...++|. |-.|+.++-|..|+..++........        ....|.++...++|.+|..|+.++-+.+||.
T Consensus       356 ~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~  434 (795)
T 4a2l_A          356 DNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR  434 (795)
T ss_dssp             CSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred             CCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence            35699999998885 55577787899999887754433211        2356999999888885677788777999998


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      .++.......                    ..+  .  .....|.++...++|...+ |+.+ -+.+||..+++......
T Consensus       435 ~~~~~~~~~~--------------------~~~--~--l~~~~v~~i~~d~~g~lwi-gt~~-Gl~~~~~~~~~~~~~~~  488 (795)
T 4a2l_A          435 NSGQVENFNQ--------------------RNS--Q--LVNENVYAILPDGEGNLWL-GTLS-ALVRFNPEQRSFTTIEK  488 (795)
T ss_dssp             TTCCEEEECT--------------------TTS--C--CSCSCEEEEEECSSSCEEE-EESS-CEEEEETTTTEEEECCB
T ss_pred             CCCcEEEeec--------------------CCC--C--cCCCeeEEEEECCCCCEEE-EecC-ceeEEeCCCCeEEEccc
Confidence            7663221100                    000  0  1345788998888887555 4444 48899988876533221


Q ss_pred             c------CCCceEEEEEcCCCCEEEccc
Q psy11015        332 E------PGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       332 ~------h~~~v~~~~~~~~g~~las~~  353 (360)
                      .      +...|.++...++|.+.++..
T Consensus       489 ~~~~~~~~~~~i~~i~~d~~g~lWigt~  516 (795)
T 4a2l_A          489 EKDGTPVVSKQITTLFRDSHKRLWIGGE  516 (795)
T ss_dssp             CTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred             cccccccCCceEEEEEECCCCCEEEEeC
Confidence            1      235789999999887655443

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.27  E-value=0.0044  Score=60.85  Aligned_cols=34  Identities=12%  Similarity=0.208  Sum_probs=28.9

Q ss_pred             EcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC
Q psy11015        300 WLSDGEQVITASWDRVANLFDVETGTILQSLTEP  333 (360)
Q Consensus       300 ~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h  333 (360)
                      +...+.++++|+.||.++.||..+|+.+..+...
T Consensus       465 ~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~  498 (668)
T 1kv9_A          465 LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ  498 (668)
T ss_dssp             EEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             eEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence            3346788999999999999999999999888754

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.25  E-value=0.078  Score=46.59  Aligned_cols=139  Identities=9%  Similarity=-0.117  Sum_probs=84.9

Q ss_pred             CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCC----CeEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEEccc
Q psy11015        180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQT----GKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~----~~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~  253 (360)
                      ...+.+++|++.+. ++++-...+.|..+++..    ......+...-.....+++.+.+ .++++-...+.|.++++..
T Consensus        29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g  108 (316)
T 1ijq_A           29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  108 (316)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence            45678999998655 555556678999999876    22222333233456789998654 4555656778899998764


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC--CcEEEEECCCCeEEEEEe
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQSLT  331 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d--g~i~iwd~~~~~~~~~l~  331 (360)
                      ...                            ...+...-.....+++.|.+..|+.+...  +.|..+++. |.....+.
T Consensus       109 ~~~----------------------------~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~  159 (316)
T 1ijq_A          109 VKR----------------------------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLV  159 (316)
T ss_dssp             SSE----------------------------EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEE
T ss_pred             Cce----------------------------EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEE
Confidence            311                            11112223467899999977766655543  678888875 43333332


Q ss_pred             -cCCCceEEEEEcCCCC
Q psy11015        332 -EPGEAIRAAAGRTGGP  347 (360)
Q Consensus       332 -~h~~~v~~~~~~~~g~  347 (360)
                       ..-.....+++++++.
T Consensus       160 ~~~~~~P~gla~d~~~~  176 (316)
T 1ijq_A          160 TENIQWPNGITLDLLSG  176 (316)
T ss_dssp             CSSCSCEEEEEEETTTT
T ss_pred             ECCCCCceEEEEeccCC
Confidence             2334568899997654

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.22  E-value=0.044  Score=48.48  Aligned_cols=150  Identities=8%  Similarity=-0.046  Sum_probs=90.2

Q ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC--CCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~--~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      ++...+.++++.+++.+++.+...+..+-+|-  .+...+.  ......+..+.+.+++.++ .++.+|.+.+++...+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~  236 (327)
T 2xbg_A          160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE  236 (327)
T ss_dssp             SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE
T ss_pred             CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC
Confidence            45668899999998877776655444444553  2333332  2355678899999888755 45567777766422121


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe---
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT---  331 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~---  331 (360)
                                               .+..+..- ..+...+.++++.+++..++.+. +|.+ ++....|+.-..+.   
T Consensus       237 -------------------------tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~  289 (327)
T 2xbg_A          237 -------------------------NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVK  289 (327)
T ss_dssp             -------------------------EECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGT
T ss_pred             -------------------------eeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccC
Confidence                                     11111110 01223578899988777666554 6766 44445454333333   


Q ss_pred             cCCCceEEEEEcCCCCEEEcccccch
Q psy11015        332 EPGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       332 ~h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      .+...+.+++|.+++.+++.+.++.|
T Consensus       290 ~~~~~~~~v~~~~~~~~~~~G~~G~i  315 (327)
T 2xbg_A          290 KVPSNFYKILFFSPDQGFILGQKGIL  315 (327)
T ss_dssp             TSSSCCCEEEEEETTEEEEECSTTEE
T ss_pred             CCCCCeEEEEEECCCceEEEcCCceE
Confidence            12456888999878888888877654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.16  E-value=0.061  Score=48.09  Aligned_cols=139  Identities=8%  Similarity=-0.094  Sum_probs=86.7

Q ss_pred             CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      ...+.+++|++... ++++-...+.|..+++..+.....+.........+++.+. +.++++-...+.|.+.++..... 
T Consensus        72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-  150 (349)
T 3v64_C           72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-  150 (349)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred             CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-
Confidence            34578999997655 4555556788999998866544444333345678999875 45556666678898888764311 


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-C-CcEEEEECCCCeEEEEEe-cCC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-D-RVANLFDVETGTILQSLT-EPG  334 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-d-g~i~iwd~~~~~~~~~l~-~h~  334 (360)
                                                 ...+...-.....+++.|.+..|+...+ . +.|..+++... ....+. ..-
T Consensus       151 ---------------------------~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~  202 (349)
T 3v64_C          151 ---------------------------KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHL  202 (349)
T ss_dssp             ---------------------------EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSC
T ss_pred             ---------------------------EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCC
Confidence                                       1112223345788999997666655444 4 67888887633 223332 223


Q ss_pred             CceEEEEEcCCCC
Q psy11015        335 EAIRAAAGRTGGP  347 (360)
Q Consensus       335 ~~v~~~~~~~~g~  347 (360)
                      .....++++|++.
T Consensus       203 ~~PnGla~d~~~~  215 (349)
T 3v64_C          203 FWPNGLTIDYAGR  215 (349)
T ss_dssp             SCEEEEEEETTTT
T ss_pred             CCcceEEEeCCCC
Confidence            3568899997544

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.16  E-value=0.081  Score=46.09  Aligned_cols=124  Identities=17%  Similarity=0.103  Sum_probs=76.6

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--cEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHI  248 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i~v  248 (360)
                      +.+..|..+ .....++|++++.++++-..++.|..||.... ....+. ..+.+..+++.++|+++++.....  .|..
T Consensus        23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~   99 (306)
T 2p4o_A           23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVS   99 (306)
T ss_dssp             EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence            444445332 45778999999987777778899999998754 333333 345688999999999766654433  3666


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG  324 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~  324 (360)
                      +|..++....                          +..+ ........++..+++..+++-..+|.|..+|..++
T Consensus       100 ~d~~~g~~~~--------------------------~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~  148 (306)
T 2p4o_A          100 LVKSDGTVET--------------------------LLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP  148 (306)
T ss_dssp             EECTTSCEEE--------------------------EEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred             EcCCCCeEEE--------------------------EEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence            6665552211                          1111 11222344555555544454445888888897765

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.14  E-value=0.0028  Score=61.18  Aligned_cols=49  Identities=18%  Similarity=0.212  Sum_probs=36.1

Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCce-EEEEEcCCCC-EEEc
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTEPGEAI-RAAAGRTGGP-IRAS  351 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v-~~~~~~~~g~-~las  351 (360)
                      .+..++.|+.||.++.||.++|+.+..+....... .-+.+..+|+ +++.
T Consensus       496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~  546 (582)
T 1flg_A          496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV  546 (582)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence            46788889999999999999999998887543321 2256667776 4443

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.14  E-value=0.087  Score=48.05  Aligned_cols=143  Identities=8%  Similarity=-0.133  Sum_probs=87.9

Q ss_pred             cCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEEc
Q psy11015        178 GHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQA  251 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd~  251 (360)
                      .....+.+|+|++.+. ++.+-...+.|+.+++...    .....+.........+++.+ .+.++++-...+.|.+.++
T Consensus       109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~  188 (400)
T 3p5b_L          109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT  188 (400)
T ss_dssp             CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred             cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence            4456788999998655 4455556788998998752    23333433445678899987 4555566666788888887


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEE
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQS  329 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~  329 (360)
                      .....                            ...+...-.....+++.|.+.+|+...+  .+.|...++........
T Consensus       189 ~g~~~----------------------------~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~  240 (400)
T 3p5b_L          189 KGVKR----------------------------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL  240 (400)
T ss_dssp             TTCSE----------------------------EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE
T ss_pred             CCCce----------------------------EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE
Confidence            64311                            1112223345789999997777665553  36788888764332222


Q ss_pred             EecCCCceEEEEEcCCCCE
Q psy11015        330 LTEPGEAIRAAAGRTGGPI  348 (360)
Q Consensus       330 l~~h~~~v~~~~~~~~g~~  348 (360)
                      +...-.....+++++.+..
T Consensus       241 ~~~~l~~P~glavd~~~~~  259 (400)
T 3p5b_L          241 VTENIQWPNGITLDLLSGR  259 (400)
T ss_dssp             ECSSCSCEEEEEEETTTTE
T ss_pred             EECCCCceEEEEEEeCCCE
Confidence            2323346788999975543

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.09  E-value=0.054  Score=48.46  Aligned_cols=141  Identities=6%  Similarity=-0.081  Sum_probs=84.4

Q ss_pred             CCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCC-CcEEEEEcccCeeE
Q psy11015        181 DGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGD-KSVHIWQAVINWEC  257 (360)
Q Consensus       181 ~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d-~~i~vwd~~~~~~~  257 (360)
                      .....+++.+. +.++++-...+.|.+.+++.......+...-.....++++|.+. ++++-... +.|..+++...   
T Consensus       116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~---  192 (349)
T 3v64_C          116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS---  192 (349)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred             CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC---
Confidence            34567888875 44556666678999999875543333444445679999998655 44554444 67777776532   


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEecCCC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPGE  335 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~~  335 (360)
                                                ....+ ...-.....++|+|++..|+.+. ..+.|..+|+........+...-.
T Consensus       193 --------------------------~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~  246 (349)
T 3v64_C          193 --------------------------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLP  246 (349)
T ss_dssp             --------------------------SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred             --------------------------CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCC
Confidence                                      11111 11234578999998777776554 457799999764332222333334


Q ss_pred             ceEEEEEcCCCCEEE
Q psy11015        336 AIRAAAGRTGGPIRA  350 (360)
Q Consensus       336 ~v~~~~~~~~g~~la  350 (360)
                      ...++++..+.-+++
T Consensus       247 ~P~giav~~~~ly~t  261 (349)
T 3v64_C          247 HPFAITVFEDSLYWT  261 (349)
T ss_dssp             SEEEEEEETTEEEEE
T ss_pred             CceEEEEECCEEEEe
Confidence            556777743333333

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.08  E-value=0.022  Score=50.20  Aligned_cols=158  Identities=9%  Similarity=0.063  Sum_probs=93.8

Q ss_pred             cCCCCEEEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEE-EeC----CC--cCeEEEEE---eeCCCEEEEEe-----
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGKCVLQ-YSG----HS--GSVNSVRF---LPNKDLVLSAS-----  241 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sgs-~Dg~v~iwd~~~~~~~~~-~~~----h~--~~v~~i~~---~p~~~~l~s~s-----  241 (360)
                      +...---+.+|++....|..++ ..++|..|+...+..... +.+    ..  ..+..|.|   .|+++++++..     
T Consensus        10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af   89 (334)
T 2p9w_A           10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF   89 (334)
T ss_dssp             CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred             CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence            3333445788988555555555 789999999986643333 222    11  13679999   68887777543     


Q ss_pred             --------CCCcEEEEEcc---cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEE
Q psy11015        242 --------GDKSVHIWQAV---INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       242 --------~d~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~t  309 (360)
                              .+..+..+|+.   ++.........                ....-...+.+ -......++..++|+.-++
T Consensus        90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~----------------~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt  153 (334)
T 2p9w_A           90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFE----------------KVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA  153 (334)
T ss_dssp             CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESH----------------HHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred             cccccccCCCCEEEEEcCCcCCCCCEEEEecCc----------------cccccccccccccccCCceeEECCCCCEEEe
Confidence                    26778999987   55322210000                00000000001 1134788999999999999


Q ss_pred             EECC-CcEEEEECCCCeEEEEEe--c----CCCceEEEEEcCCCCEEEcc
Q psy11015        310 ASWD-RVANLFDVETGTILQSLT--E----PGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       310 gs~d-g~i~iwd~~~~~~~~~l~--~----h~~~v~~~~~~~~g~~las~  352 (360)
                      ++.. +.|..++.. |+.+..+.  .    .....+.++++|+|..|+..
T Consensus       154 ~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~  202 (334)
T 2p9w_A          154 FALGMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAF  202 (334)
T ss_dssp             EEESSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEE
T ss_pred             CCCCCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEE
Confidence            9988 887777755 33333221  1    12246799999999766544

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.07  E-value=0.052  Score=49.27  Aligned_cols=141  Identities=8%  Similarity=-0.109  Sum_probs=86.2

Q ss_pred             CCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEEcccCee
Q psy11015        179 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       179 h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      ....+.+++|++.+. ++++-...+.|..+++..+.....+.........+++.+.+ .++++-...+.|.+.++.... 
T Consensus       114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-  192 (386)
T 3v65_B          114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-  192 (386)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-
T ss_pred             CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-
Confidence            344578999997555 55555667889999988665444444333456788888754 455555666778777765331 


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-C-CcEEEEECCCCeEEEEEecCC
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-D-RVANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-d-g~i~iwd~~~~~~~~~l~~h~  334 (360)
                                                 ....+...-.....+++.|.+.+|+...+ . +.|..+++............-
T Consensus       193 ---------------------------~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~  245 (386)
T 3v65_B          193 ---------------------------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL  245 (386)
T ss_dssp             ---------------------------CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred             ---------------------------eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC
Confidence                                       01112223346788999987777665554 3 678888876433222222233


Q ss_pred             CceEEEEEcCCCC
Q psy11015        335 EAIRAAAGRTGGP  347 (360)
Q Consensus       335 ~~v~~~~~~~~g~  347 (360)
                      ...+.++|+|++.
T Consensus       246 ~~PnGlavd~~~~  258 (386)
T 3v65_B          246 FWPNGLTIDYAGR  258 (386)
T ss_dssp             SCEEEEEEEGGGT
T ss_pred             CCeeeEEEeCCCC
Confidence            4568899986543

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.07  E-value=0.1  Score=52.14  Aligned_cols=146  Identities=10%  Similarity=-0.051  Sum_probs=94.3

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe----CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS----GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~----~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      ...|.++...+++..|..|+.++-+..||..+++......    .....|.++...++|.+.+. +.+ -+.+||..++.
T Consensus       405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~~-Gl~~~~~~~~~  482 (795)
T 4a2l_A          405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TLS-ALVRFNPEQRS  482 (795)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ESS-CEEEEETTTTE
T ss_pred             CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ecC-ceeEEeCCCCe
Confidence            3579999998888757778887889999998876433221    12457999998888875554 444 58889877653


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe----
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT----  331 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~----  331 (360)
                      .......                    ....  ......|.++...++|...+.. . +-|..||..++..  .+.    
T Consensus       483 ~~~~~~~--------------------~~~~--~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~~~~  536 (795)
T 4a2l_A          483 FTTIEKE--------------------KDGT--PVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI--QKASILP  536 (795)
T ss_dssp             EEECCBC--------------------TTCC--BCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE--EECCCSC
T ss_pred             EEEcccc--------------------cccc--ccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE--EEecCCC
Confidence            2210000                    0000  0123568899888888766544 4 4588899877765  332    


Q ss_pred             ---cCCCceEEEEEcCCCCEEEccc
Q psy11015        332 ---EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       332 ---~h~~~v~~~~~~~~g~~las~~  353 (360)
                         .+...|.++...++|.+.+++.
T Consensus       537 ~~~l~~~~i~~i~~d~~g~lWigT~  561 (795)
T 4a2l_A          537 VSNVTKLFTNCIYEASNGIIWVGTR  561 (795)
T ss_dssp             SCGGGGSCEEEEEECTTSCEEEEES
T ss_pred             CCCCCCCeeEEEEECCCCCEEEEeC
Confidence               1345789999999888554443

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.06  E-value=0.12  Score=44.00  Aligned_cols=166  Identities=8%  Similarity=0.057  Sum_probs=98.2

Q ss_pred             eeeeeeee-cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEe------CCCcCeEEEEEeeCCCEEEE
Q psy11015        170 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYS------GHSGSVNSVRFLPNKDLVLS  239 (360)
Q Consensus       170 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~------~h~~~v~~i~~~p~~~~l~s  239 (360)
                      +..++.+. +-....-.+++.+++.++++.-.++.+.++++....   .+....      ........++|+|.++.|++
T Consensus        58 g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v  137 (255)
T 3qqz_A           58 GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF  137 (255)
T ss_dssp             CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE
T ss_pred             CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE
Confidence            45555542 222567788888888776766567888898876543   223332      12344689999999877777


Q ss_pred             EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEECCCcEEE
Q psy11015        240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANL  318 (360)
Q Consensus       240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs~dg~i~i  318 (360)
                      +.......+|.+. +...      .         . .... ...+...-..+...+.+++++|....+ +....++.|.+
T Consensus       138 a~E~~p~~i~~~~-g~~~------~---------~-~l~i-~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~  199 (255)
T 3qqz_A          138 FKEKNPIEVYKVN-GLLS------S---------N-ELHI-SKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQE  199 (255)
T ss_dssp             EEESSSEEEEEEE-STTC------S---------S-CCEE-EECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             EECcCCceEEEEc-cccc------C---------C-ceee-ecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEE
Confidence            7766566666654 1000      0         0 0000 000000000123456889999965554 55556678999


Q ss_pred             EECCCCeEEEEEecCC---------CceEEEEEcCCCCEEEcccc
Q psy11015        319 FDVETGTILQSLTEPG---------EAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       319 wd~~~~~~~~~l~~h~---------~~v~~~~~~~~g~~las~~~  354 (360)
                      +|.. |+.+..+.-..         ..--.++|.++|++.+++..
T Consensus       200 ~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~  243 (255)
T 3qqz_A          200 VTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP  243 (255)
T ss_dssp             ECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred             EcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence            9965 66665554321         25588999999998777653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=96.96  E-value=0.073  Score=48.31  Aligned_cols=135  Identities=7%  Similarity=-0.080  Sum_probs=80.9

Q ss_pred             CEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCC-CcEEEEEcccCeeEe
Q psy11015        182 GVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD-KSVHIWQAVINWECL  258 (360)
Q Consensus       182 ~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d-~~i~vwd~~~~~~~~  258 (360)
                      ....+++.+.+. ++++-...+.|.+.++........+...-.....|++.|.+..|+ +-... +.|..+++...    
T Consensus       160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~----  235 (386)
T 3v65_B          160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS----  235 (386)
T ss_dssp             CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----
T ss_pred             CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC----
Confidence            446678887544 556666677888888875443334444445689999998665554 44344 56777765432    


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEecCCCc
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPGEA  336 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~~~  336 (360)
                                               ....+ ...-.....++|+|++..|+.+. ..+.|..+|+........+...-..
T Consensus       236 -------------------------~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~  290 (386)
T 3v65_B          236 -------------------------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPH  290 (386)
T ss_dssp             -------------------------SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSS
T ss_pred             -------------------------CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCC
Confidence                                     11112 12234578999998777766554 4577999987643332233323345


Q ss_pred             eEEEEEcCC
Q psy11015        337 IRAAAGRTG  345 (360)
Q Consensus       337 v~~~~~~~~  345 (360)
                      ..++++..+
T Consensus       291 P~giav~~~  299 (386)
T 3v65_B          291 PFAITVFED  299 (386)
T ss_dssp             EEEEEEETT
T ss_pred             ceEEEEECC
Confidence            567777433

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=96.92  E-value=0.016  Score=53.61  Aligned_cols=137  Identities=14%  Similarity=0.154  Sum_probs=83.0

Q ss_pred             CEEEEEECCC--CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC---Cc-EEEEEcccCe
Q psy11015        182 GVWDVAVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KS-VHIWQAVINW  255 (360)
Q Consensus       182 ~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d---~~-i~vwd~~~~~  255 (360)
                      ....|+|+|+  ...|+.+...+.|+.+|..++....... .......++|+++|+++++....   .. +...+...+.
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~  218 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF  218 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred             CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence            4578999984  3455555544899999998777554433 44568999999999955554322   11 2222211110


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEE-ec-
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSL-TE-  332 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l-~~-  332 (360)
                                                 .....+. .-.....+++.| +|...++-..++.|+.+|..++.....+ .. 
T Consensus       219 ---------------------------~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~  270 (433)
T 4hw6_A          219 ---------------------------TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD  270 (433)
T ss_dssp             ---------------------------CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS
T ss_pred             ---------------------------ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC
Confidence                                       0001111 123345688999 6766666667788999998877653333 21 


Q ss_pred             CCCceEEEEEcCCCC
Q psy11015        333 PGEAIRAAAGRTGGP  347 (360)
Q Consensus       333 h~~~v~~~~~~~~g~  347 (360)
                      ....-..++|+|+|+
T Consensus       271 ~~~~~~~ia~dpdG~  285 (433)
T 4hw6_A          271 TKGSNFHIVWHPTGD  285 (433)
T ss_dssp             CCSSCEEEEECTTSS
T ss_pred             CCCCcccEEEeCCCC
Confidence            122335799999997

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=96.90  E-value=0.18  Score=44.50  Aligned_cols=159  Identities=13%  Similarity=0.011  Sum_probs=88.4

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~-~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      .+.+.+.....+.+.+..+.+.+++..++.+ .+|.|.. ..+.|+. .....++...+..+.+.|++.+++.+...+..
T Consensus       109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~  186 (327)
T 2xbg_A          109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFY  186 (327)
T ss_dssp             SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred             CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence            3444433222334567888877666555554 4555422 2222322 12223456678999999988877666444333


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  326 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~  326 (360)
                      +-+|-. +                         ..++++.  ......+..+.+.+++..+ .++.+|.+.+++...|+.
T Consensus       187 ~S~d~g-G-------------------------~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~t  237 (327)
T 2xbg_A          187 STWEPG-Q-------------------------TAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSEN  237 (327)
T ss_dssp             EEECTT-C-------------------------SSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEE
T ss_pred             EEeCCC-C-------------------------CceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCe
Confidence            333320 1                         1112221  2344578889999988755 455678887775333433


Q ss_pred             EEEEec----CCCceEEEEEcCCCCEEEcccccch
Q psy11015        327 LQSLTE----PGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       327 ~~~l~~----h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      -..+..    +...+.++++.+++.+++.+.++.|
T Consensus       238 W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i  272 (327)
T 2xbg_A          238 WGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL  272 (327)
T ss_dssp             ECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE
T ss_pred             eEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE
Confidence            222221    2235889999988888887666543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=96.87  E-value=0.055  Score=53.79  Aligned_cols=70  Identities=13%  Similarity=0.037  Sum_probs=47.3

Q ss_pred             EEEECCCCCEEEEEeCC-----CcEEEEECCCCe--EEEEEe-CCCcCeEEEEEeeCCCEEEEEeC---CCcEEEEEccc
Q psy11015        185 DVAVRPGQPVLGSASAD-----RTVRLWSTQTGK--CVLQYS-GHSGSVNSVRFLPNKDLVLSASG---DKSVHIWQAVI  253 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~D-----g~v~iwd~~~~~--~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~---d~~i~vwd~~~  253 (360)
                      .++|+||++.|+....|     ..|.++++.++.  ....+. ........+.|+|||++|+..+.   ...|.++|+.+
T Consensus       225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~  304 (751)
T 2xe4_A          225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK  304 (751)
T ss_dssp             CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred             eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence            56899999877777665     268888887764  233443 23345678899999998776553   23467777764


Q ss_pred             C
Q psy11015        254 N  254 (360)
Q Consensus       254 ~  254 (360)
                      +
T Consensus       305 ~  305 (751)
T 2xe4_A          305 G  305 (751)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=96.80  E-value=0.035  Score=53.59  Aligned_cols=49  Identities=22%  Similarity=0.210  Sum_probs=35.1

Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc-eEEEEEcCCCC-EEEc
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTEPGEA-IRAAAGRTGGP-IRAS  351 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~-v~~~~~~~~g~-~las  351 (360)
                      .+..++.|+.||.++.||.++|+.+..+...... ..-+.+..+|+ +++.
T Consensus       483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~  533 (599)
T 1w6s_A          483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAI  533 (599)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEE
Confidence            5678888999999999999999999888644321 12345556775 4443

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.78  E-value=0.18  Score=46.85  Aligned_cols=54  Identities=13%  Similarity=0.180  Sum_probs=37.0

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEEEeC------CCcCeEEEEEeeC
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSG------HSGSVNSVRFLPN  233 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~--~~~~~~------h~~~v~~i~~~p~  233 (360)
                      -...++|+|.|+|.++++-...+.|++++..++..  +..+..      ..+.+..|+|+|+
T Consensus        26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd   87 (454)
T 1cru_A           26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (454)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence            44678999999998777665545788888665543  222321      2456789999995

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=96.78  E-value=0.05  Score=53.32  Aligned_cols=76  Identities=11%  Similarity=0.100  Sum_probs=57.1

Q ss_pred             EEEECCCCCEEEEEeCCCc-------------------EEEEECCCCeEEEEEeC--CC-------cCeEEEEEeeCCC-
Q psy11015        185 DVAVRPGQPVLGSASADRT-------------------VRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNKD-  235 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~Dg~-------------------v~iwd~~~~~~~~~~~~--h~-------~~v~~i~~~p~~~-  235 (360)
                      .++++|....++.++.++.                   |..+|..+|+.+..++.  |.       .++....+..+|+ 
T Consensus       234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~  313 (668)
T 1kv9_A          234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP  313 (668)
T ss_dssp             CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred             ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence            4678888888888887763                   99999999999988874  22       2333333334675 


Q ss_pred             --EEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        236 --LVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       236 --~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                        .++.++.+|.+.++|..+|......
T Consensus       314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~  340 (668)
T 1kv9_A          314 RKVLMQAPKNGFFYVLDRTNGKLISAE  340 (668)
T ss_dssp             EEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred             EEEEEEECCCCEEEEEECCCCCEeccc
Confidence              6888999999999999999877543

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.68  E-value=0.26  Score=49.16  Aligned_cols=140  Identities=9%  Similarity=-0.120  Sum_probs=86.8

Q ss_pred             CCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcc
Q psy11015        179 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAV  252 (360)
Q Consensus       179 h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~  252 (360)
                      ....+.+|+|++... ++++-...+.|+.+++...    .....+.........|++.+.+. ++++-...+.|.+.++.
T Consensus       422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld  501 (791)
T 3m0c_C          422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK  501 (791)
T ss_dssp             SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence            445678899998544 5555566678988888752    22333443445677899987664 55566677889999876


Q ss_pred             cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEECC--CcEEEEECCCCeEEEE
Q psy11015        253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQS  329 (360)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~d--g~i~iwd~~~~~~~~~  329 (360)
                      ...                             ...+ ...-.....|++.|.+.+|+...+.  +.|...++........
T Consensus       502 G~~-----------------------------~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l  552 (791)
T 3m0c_C          502 GVK-----------------------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL  552 (791)
T ss_dssp             SSS-----------------------------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred             CCe-----------------------------EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE
Confidence            441                             1122 2233457899999986676665542  6788888764433333


Q ss_pred             EecCCCceEEEEEcCCCC
Q psy11015        330 LTEPGEAIRAAAGRTGGP  347 (360)
Q Consensus       330 l~~h~~~v~~~~~~~~g~  347 (360)
                      +...-.....|++++.+.
T Consensus       553 v~~~l~~P~GLavD~~~~  570 (791)
T 3m0c_C          553 VTENIQWPNGITLDLLSG  570 (791)
T ss_dssp             ECSSCSCEEEEEEETTTT
T ss_pred             EeCCCCCceEEEEecCCC
Confidence            333334678889886543

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=96.64  E-value=0.03  Score=47.66  Aligned_cols=127  Identities=9%  Similarity=0.108  Sum_probs=79.0

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-----cCeEEEEEeeCCCEEEEE
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-----GSVNSVRFLPNKDLVLSA  240 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-----~~v~~i~~~p~~~~l~s~  240 (360)
                      +..+.+.+.++.-.. .=+.+++  ++..|+.+..++.|.++|..+.+.+..+.-..     ..++.+.|. +|.+++..
T Consensus       113 D~~t~~~~~ti~~~~-eG~glt~--dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~  188 (262)
T 3nol_A          113 NIRNLRQVRSFNYDG-EGWGLTH--NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANV  188 (262)
T ss_dssp             ETTTCCEEEEEECSS-CCCCEEE--CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred             ECccCcEEEEEECCC-CceEEec--CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEE
Confidence            335666777776432 2244553  45656655557889999999998887765321     335667886 77766666


Q ss_pred             eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015        241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW  312 (360)
Q Consensus       241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~  312 (360)
                      -.+..|.+.|..++.....+.......                .......-....+.|||+|+++.|+..+.
T Consensus       189 w~~~~I~vIDp~tG~V~~~Id~~~L~~----------------~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          189 WQTNKIVRIDPETGKVTGIIDLNGILA----------------EAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             TTSSEEEEECTTTCBEEEEEECTTGGG----------------GSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             ccCCeEEEEECCCCcEEEEEECCcCcc----------------ccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            678899999999986655432221000                00000111245789999999887766664

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=96.59  E-value=0.37  Score=42.93  Aligned_cols=161  Identities=11%  Similarity=0.060  Sum_probs=88.7

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE--EEE----eCCCcCeEEEEEeeC----CCEEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV--LQY----SGHSGSVNSVRFLPN----KDLVLS  239 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~--~~~----~~h~~~v~~i~~~p~----~~~l~s  239 (360)
                      ...+..+...-..-+.|+|.|+|.++++--..|.|++++...+...  ..+    ....+....|+|+|+    +.+.++
T Consensus        21 ~~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~  100 (347)
T 3das_A           21 VKVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY  100 (347)
T ss_dssp             EEEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred             CceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence            3445555556677899999999987777766899999987666432  222    123456899999995    434343


Q ss_pred             Ee--CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccc-eeEe---eCCCCcEEEEEEcCCCCEEEEEEC-
Q psy11015        240 AS--GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTP-VKEL---LGHSNVVIAADWLSDGEQVITASW-  312 (360)
Q Consensus       240 ~s--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~h~~~v~~i~~sp~g~~l~tgs~-  312 (360)
                      -+  .+..|.-|.+..+..          ...        ....... +..+   ..|.  -..++|.|+|.+.++.+. 
T Consensus       101 yt~~~~~~v~R~~~~~~~~----------~~~--------~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~Gd~  160 (347)
T 3das_A          101 FTSASDNRIVRMLYDEKKP----------SGE--------QLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTGES  160 (347)
T ss_dssp             EECSSSEEEEEEEBCTTSC----------TTC--------CBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECBCT
T ss_pred             EecCCCCEEEEEEeCCCCc----------ccc--------cCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEECCC
Confidence            22  334444444432100          000        0000001 1111   1233  456999999987776442 


Q ss_pred             ------------CCcEEEEECCCC---------eEEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        313 ------------DRVANLFDVETG---------TILQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       313 ------------dg~i~iwd~~~~---------~~~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                                  .|.|.-.+....         ..+. -.+|.+ ...++|+|+|.+.++-
T Consensus       161 ~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d  219 (347)
T 3das_A          161 GDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVY-SYGHRN-VQGLAWDDKQRLFASE  219 (347)
T ss_dssp             TCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEE-EBCCSB-CCEEEECTTCCEEEEE
T ss_pred             CCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEE-eeCCCC-cceEEECCCCCEEEEe
Confidence                        244444444321         1111 124543 4678999998877653

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=96.59  E-value=0.16  Score=45.52  Aligned_cols=151  Identities=15%  Similarity=0.021  Sum_probs=81.3

Q ss_pred             eecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-EEEEEe---CCCcCeEEEEEeeC----CCEEEEEeC---C-
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQYS---GHSGSVNSVRFLPN----KDLVLSASG---D-  243 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-~~~~~~---~h~~~v~~i~~~p~----~~~l~s~s~---d-  243 (360)
                      +...-...++|+|.|++.+ +.+..+|.|++++ ..+. .+..+.   ........|+|+|+    +.++++-+.   + 
T Consensus        24 va~~l~~P~~ia~~pdG~l-~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~  101 (354)
T 3a9g_A           24 VASDLEVPWSIAPLGGGRY-LVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG  101 (354)
T ss_dssp             EECSCSCEEEEEEEETTEE-EEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred             EeCCCCCCeEEEEcCCCeE-EEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence            3333456789999999974 4455669999997 4554 222221   12346889999997    444444332   3 


Q ss_pred             ---CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccc-eeEee-CCCCcEEEEEEcCCCCEEEEEEC------
Q psy11015        244 ---KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTP-VKELL-GHSNVVIAADWLSDGEQVITASW------  312 (360)
Q Consensus       244 ---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~h~~~v~~i~~sp~g~~l~tgs~------  312 (360)
                         ..|..|+...+...                     ....+. +..+. +.......++|.|+|.+.++.+.      
T Consensus       102 ~~~~~v~r~~~~~~~~~---------------------~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~  160 (354)
T 3a9g_A          102 HIRNRVIRGRLDGSTFK---------------------LKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRL  160 (354)
T ss_dssp             CEEEEEEEEEECSSSCC---------------------EEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGG
T ss_pred             CcceEEEEEEECCCCcC---------------------cCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCcc
Confidence               45666665432000                     000011 11121 11112356899999987666432      


Q ss_pred             -------CCcEEEEECCCCe----------EEEEEecCCCceEEEEEcC-CCCEEEcc
Q psy11015        313 -------DRVANLFDVETGT----------ILQSLTEPGEAIRAAAGRT-GGPIRASP  352 (360)
Q Consensus       313 -------dg~i~iwd~~~~~----------~~~~l~~h~~~v~~~~~~~-~g~~las~  352 (360)
                             .|.|.-++.. |.          .+. ..++.. ...++|+| +|.+.++-
T Consensus       161 ~~d~~~~~G~I~ri~~d-G~~p~~npf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d  215 (354)
T 3a9g_A          161 AQDLSSLAGKILRVDEE-GRPPADNPFPNSPIW-SYGHRN-PQGIDWHRASGVMVATE  215 (354)
T ss_dssp             GTCTTCCSSEEEEECTT-SCCCTTSSSTTCCEE-EECCSC-CCEEEECTTTCCEEEEE
T ss_pred             ccCCCCCCeEEEEEcCC-CCCCCCCCCCCCcEE-EEccCC-cceEEEeCCCCCEEEEe
Confidence                   2445555543 22          111 123433 46799999 78877653

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=96.57  E-value=0.11  Score=46.55  Aligned_cols=71  Identities=15%  Similarity=0.220  Sum_probs=45.1

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEEEe---CCCcCeEEEEEeeC---CCEE-EEEeCC-----C
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYS---GHSGSVNSVRFLPN---KDLV-LSASGD-----K  244 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~--~~~~~---~h~~~v~~i~~~p~---~~~l-~s~s~d-----~  244 (360)
                      .-..-+.|+|.|+|.++++ ..+|.|++++  .+..  +..+.   ........|+|+|+   +..| ++-...     .
T Consensus        29 ~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~  105 (352)
T 2ism_A           29 GLEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN  105 (352)
T ss_dssp             CCSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred             CCCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence            3446789999999985554 5669999998  4542  22221   12356899999998   4444 443332     5


Q ss_pred             cEEEEEcc
Q psy11015        245 SVHIWQAV  252 (360)
Q Consensus       245 ~i~vwd~~  252 (360)
                      .|..|+..
T Consensus       106 ~v~r~~~~  113 (352)
T 2ism_A          106 QVVRLRHL  113 (352)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEeC
Confidence            56677665

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.57  E-value=0.072  Score=49.90  Aligned_cols=143  Identities=10%  Similarity=-0.007  Sum_probs=82.4

Q ss_pred             CEEEEEECCC-CCEEEEE-eCCCcEEEEECCCCeEEEEEeCC---CcCeEEEEE-------eeCCCEEEEEeCCC-c---
Q psy11015        182 GVWDVAVRPG-QPVLGSA-SADRTVRLWSTQTGKCVLQYSGH---SGSVNSVRF-------LPNKDLVLSASGDK-S---  245 (360)
Q Consensus       182 ~V~~l~~~~~-~~~l~sg-s~Dg~v~iwd~~~~~~~~~~~~h---~~~v~~i~~-------~p~~~~l~s~s~d~-~---  245 (360)
                      ....|+|+|. +..|+.+ ...+.|++.|+..+.....+..-   ......|+|       +++|+.++.+...+ .   
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            3578999983 4444444 44467889998877665544322   224899999       99999665555443 2   


Q ss_pred             ---EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEEC
Q psy11015        246 ---VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDV  321 (360)
Q Consensus       246 ---i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~  321 (360)
                         |.+++........                   .......+..+ .   ....++++|++ .++++-..++.|..+|+
T Consensus       220 ~~~V~~i~r~~~G~~~-------------------~~~~~~~v~~~-~---~p~giavdp~~g~LYvtd~~~g~V~r~d~  276 (496)
T 3kya_A          220 SPSVYIIKRNADGTFD-------------------DRSDIQLIAAY-K---QCNGATIHPINGELYFNSYEKGQVFRLDL  276 (496)
T ss_dssp             EEEEEEEECCTTSCCS-------------------TTSCEEEEEEE-S---CCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred             CceEEEEecCCCCcee-------------------ecccceeeccC-C---CceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence               4455432210000                   00000112222 1   23467889954 44556667788999998


Q ss_pred             C-------CCeE-----------EEE-Ee-cCCCceEEEEEcCCCC
Q psy11015        322 E-------TGTI-----------LQS-LT-EPGEAIRAAAGRTGGP  347 (360)
Q Consensus       322 ~-------~~~~-----------~~~-l~-~h~~~v~~~~~~~~g~  347 (360)
                      .       ++..           ... +. +.....+.++|+|+|+
T Consensus       277 ~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~  322 (496)
T 3kya_A          277 VDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGK  322 (496)
T ss_dssp             HHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSS
T ss_pred             ccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCC
Confidence            7       5543           122 22 2234468999999998

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.54  E-value=0.072  Score=48.55  Aligned_cols=117  Identities=13%  Similarity=0.147  Sum_probs=76.0

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe------------EEEEEeC------CCcCeEEEEEeeC---CCEEEEE
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK------------CVLQYSG------HSGSVNSVRFLPN---KDLVLSA  240 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~------------~~~~~~~------h~~~v~~i~~~p~---~~~l~s~  240 (360)
                      .|..+..+|+|.+||..+.. +|.|-.+..+.            ..+.|.-      ...+|..+.|||-   +..|++-
T Consensus        67 ~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL  145 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL  145 (452)
T ss_dssp             TTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred             ceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence            57889999999999988765 78887776321            1233432      2467999999994   5689999


Q ss_pred             eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE--CCCcEE
Q psy11015        241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVAN  317 (360)
Q Consensus       241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--~dg~i~  317 (360)
                      ..|++|++||+......+.                  ..........+..+...|.+++|.++|-.|...+  .+|-|+
T Consensus       146 tsD~~Ir~yDl~~s~~~P~------------------~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY  206 (452)
T 3pbp_A          146 KEDDTITMFDILNSQEKPI------------------VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF  206 (452)
T ss_dssp             ETTSCEEEEETTCTTSCCE------------------EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred             ecCCEEEEEEcccCCCCCc------------------chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence            9999999999986321111                  0000001112223446788999988776665544  556554

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.50  E-value=0.16  Score=50.56  Aligned_cols=144  Identities=8%  Similarity=-0.029  Sum_probs=90.6

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE---eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~---~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      ...|.++...+++. |..|+.++-+..||..++......   ......|.++...++|.+. .|+.++-+..+|..++..
T Consensus       362 ~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~  439 (781)
T 3v9f_A          362 NKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKF  439 (781)
T ss_dssp             SSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEE
T ss_pred             CcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcE
Confidence            35699999988775 556676677888998754322111   1234568999888777654 467766788888765521


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC---
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP---  333 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h---  333 (360)
                      ...                          .........|.++...++|... .|+. +-|..||..+++........   
T Consensus       440 ~~~--------------------------~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~  491 (781)
T 3v9f_A          440 QII--------------------------ELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHHYDTSNSQ  491 (781)
T ss_dssp             EEC--------------------------CSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEEECTTTSS
T ss_pred             EEe--------------------------ccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEecccCcccc
Confidence            110                          0001134578888888777544 4555 55889998876543332222   


Q ss_pred             --CCceEEEEEcCCCCEEEccc
Q psy11015        334 --GEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       334 --~~~v~~~~~~~~g~~las~~  353 (360)
                        ...|.+++..++|.+.++..
T Consensus       492 ~~~~~i~~i~~d~~g~lWigt~  513 (781)
T 3v9f_A          492 LLENFVRSIAQDSEGRFWIGTF  513 (781)
T ss_dssp             CSCSCEEEEEECTTCCEEEEES
T ss_pred             cccceeEEEEEcCCCCEEEEEc
Confidence              46789999998888666544

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.39  E-value=0.26  Score=43.27  Aligned_cols=136  Identities=7%  Similarity=-0.107  Sum_probs=84.1

Q ss_pred             CEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeE-EEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015        182 GVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       182 ~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~-~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      .+.+++|++.+. ++.+-...+.|..+++..+.. ...+...-.....+++.+. +.++++-...+.|.++++....   
T Consensus        36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---  112 (318)
T 3sov_A           36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL---  112 (318)
T ss_dssp             EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---
T ss_pred             ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---
Confidence            466889998544 555666678899999876532 1222222345678899874 4555666667889999876431   


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEE-ecCC
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSL-TEPG  334 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l-~~h~  334 (360)
                                                ...+ .........+++.|.+.+|+.+.+  .+.|...++. |.....+ ...-
T Consensus       113 --------------------------~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l  165 (318)
T 3sov_A          113 --------------------------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEI  165 (318)
T ss_dssp             --------------------------CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSC
T ss_pred             --------------------------EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCC
Confidence                                      1112 133345788999987667666553  4778888875 3322333 2223


Q ss_pred             CceEEEEEcCCCC
Q psy11015        335 EAIRAAAGRTGGP  347 (360)
Q Consensus       335 ~~v~~~~~~~~g~  347 (360)
                      ...+.++++|++.
T Consensus       166 ~~Pnglavd~~~~  178 (318)
T 3sov_A          166 YWPNGLTLDYEEQ  178 (318)
T ss_dssp             SCEEEEEEETTTT
T ss_pred             CCccEEEEeccCC
Confidence            3568899998543

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=96.29  E-value=0.17  Score=48.56  Aligned_cols=75  Identities=13%  Similarity=0.010  Sum_probs=51.6

Q ss_pred             EEECCCCCEEEEEeCC----------------CcEEEEECCCCeEEEEEeCC--C--------cCeEEEEEeeCCC---E
Q psy11015        186 VAVRPGQPVLGSASAD----------------RTVRLWSTQTGKCVLQYSGH--S--------GSVNSVRFLPNKD---L  236 (360)
Q Consensus       186 l~~~~~~~~l~sgs~D----------------g~v~iwd~~~~~~~~~~~~h--~--------~~v~~i~~~p~~~---~  236 (360)
                      +++.+....++.++.+                +.|..+|..+|+.+..++..  .        .++ -+...++|+   .
T Consensus       240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~  318 (571)
T 2ad6_A          240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPL  318 (571)
T ss_dssp             CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEE
T ss_pred             EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEE
Confidence            5667766666666532                36999999999998888632  1        122 122234674   5


Q ss_pred             EEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        237 VLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       237 l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      ++.++.+|.+.++|..++.......
T Consensus       319 v~~~~~~G~l~~lD~~tG~~~w~~~  343 (571)
T 2ad6_A          319 LSHIDRNGILYTLNRENGNLIVAEK  343 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEeCCCcEEEEEECCCCCEEeeec
Confidence            7788999999999999998776543

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.25  E-value=0.24  Score=45.59  Aligned_cols=71  Identities=10%  Similarity=0.059  Sum_probs=51.1

Q ss_pred             CEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcc
Q psy11015        182 GVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAV  252 (360)
Q Consensus       182 ~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~  252 (360)
                      ...+++++| ++.++++-..++.|..++...+....... +.......++|+|+|+ ++++-...+.|..++..
T Consensus       227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            356788999 67777777778899999998775422222 1224578999999999 45555667889998765

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.25  E-value=0.25  Score=49.14  Aligned_cols=145  Identities=15%  Similarity=0.067  Sum_probs=90.0

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC-----CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN  254 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h-----~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~  254 (360)
                      ...|.++...+++. |..|+. +-+..||..+++........     ...|.++...++|.+.+ |+.++-+..||..++
T Consensus       449 ~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~  525 (781)
T 3v9f_A          449 LLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ  525 (781)
T ss_dssp             CCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC
T ss_pred             CCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC
Confidence            46789999988875 444555 56888998876544333222     35789999988887554 555334777876654


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec--
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE--  332 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~--  332 (360)
                      ......                       ....  .....|.++...++|...+ |+.+|.+..||..+++. ..+..  
T Consensus       526 ~~~~~~-----------------------~~~~--l~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d~~~~~~-~~~~~~~  578 (781)
T 3v9f_A          526 LVRKFN-----------------------QYEG--FCSNTINQIYRSSKGQMWL-ATGEGLVCFPSARNFDY-QVFQRKE  578 (781)
T ss_dssp             EEEEEC-----------------------TTTT--CSCSCEEEEEECTTSCEEE-EETTEEEEESCTTTCCC-EEECGGG
T ss_pred             eEEEcc-----------------------CCCC--CCCCeeEEEEECCCCCEEE-EECCCceEEECCCCCcE-EEccccC
Confidence            211100                       0000  1235688998888887655 44467658899877653 33322  


Q ss_pred             --CCCceEEEEEcCCCCEEEcccc
Q psy11015        333 --PGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       333 --h~~~v~~~~~~~~g~~las~~~  354 (360)
                        ....|.+++..++|.+-+++..
T Consensus       579 gl~~~~i~~i~~d~~g~lW~~t~~  602 (781)
T 3v9f_A          579 GLPNTHIRAISEDKNGNIWASTNT  602 (781)
T ss_dssp             TCSCCCCCEEEECSSSCEEEECSS
T ss_pred             CCCCceEEEEEECCCCCEEEEcCC
Confidence              2346788888888887666543

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=96.24  E-value=0.19  Score=46.27  Aligned_cols=155  Identities=9%  Similarity=0.004  Sum_probs=89.1

Q ss_pred             CEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEE-e-CCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEccc--Ce
Q psy11015        182 GVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY-S-GHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVI--NW  255 (360)
Q Consensus       182 ~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-~-~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~--~~  255 (360)
                      ....++++| ++.++++-..++.|+.++..++.....+ . +....-..++|+|+++ ++++-...+.|..+++..  +.
T Consensus       229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~  308 (433)
T 4hw6_A          229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGK  308 (433)
T ss_dssp             SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCC
T ss_pred             CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcc
Confidence            346688899 6766666667788999999877652322 2 1222345799999998 455555678899888652  21


Q ss_pred             e----EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE---------cCCCCEEEEEECCCcEEEEECC
Q psy11015        256 E----CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW---------LSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       256 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~---------sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                      .    ...-..           .... .....   .....-.....+++         .++|...++-...+.|+.++. 
T Consensus       309 ~~~~~~~ag~~-----------g~~g-~~dg~---~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-  372 (433)
T 4hw6_A          309 LAVPYIVCGQH-----------SSPG-WVDGM---GTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-  372 (433)
T ss_dssp             BCCCEEEEECT-----------TCCC-CBCEE---GGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-
T ss_pred             cCcEEEEEecC-----------CCCc-cCCCc---ccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-
Confidence            0    000000           0000 00000   00001124667888         667766666667788999984 


Q ss_pred             CCeEEEEEecCC------------------CceEEEEEc-CCCCEEEccc
Q psy11015        323 TGTILQSLTEPG------------------EAIRAAAGR-TGGPIRASPL  353 (360)
Q Consensus       323 ~~~~~~~l~~h~------------------~~v~~~~~~-~~g~~las~~  353 (360)
                      +|. +.++.+..                  .....++++ ++|.+.++-.
T Consensus       373 ~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~  421 (433)
T 4hw6_A          373 EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC  421 (433)
T ss_dssp             TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred             CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence            564 33443211                  136789999 7887666543

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.22  E-value=0.17  Score=45.03  Aligned_cols=137  Identities=12%  Similarity=0.169  Sum_probs=83.7

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC----CC---EEEEEeC---CCcEEEEEcc--cCeeEee
Q psy11015        192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN----KD---LVLSASG---DKSVHIWQAV--INWECLV  259 (360)
Q Consensus       192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~----~~---~l~s~s~---d~~i~vwd~~--~~~~~~~  259 (360)
                      ..+++.....+-+.+||+ .|+.++.+..  +.++.+..-|+    |.   ++++...   +++|.+|++.  ++. ...
T Consensus        40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~  115 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS  115 (355)
T ss_dssp             GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred             ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence            346666777889999999 8998888864  67888888773    22   2333333   5789999774  221 100


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE--cCC-CC-EEEEEECCCcEEEEEC-------CCCeEEE
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW--LSD-GE-QVITASWDRVANLFDV-------ETGTILQ  328 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--sp~-g~-~l~tgs~dg~i~iwd~-------~~~~~~~  328 (360)
                                           .......+..-...+..+|+  +|. +. ++++...+|.+..|++       .+++.+.
T Consensus       116 ---------------------i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR  174 (355)
T 3amr_A          116 ---------------------MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVR  174 (355)
T ss_dssp             ---------------------CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEE
T ss_pred             ---------------------ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEE
Confidence                                 00000000001144566777  674 44 6788888899999988       2346677


Q ss_pred             EEecCCCceEEEEEcCC-CCEEEcccc
Q psy11015        329 SLTEPGEAIRAAAGRTG-GPIRASPLL  354 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~~-g~~las~~~  354 (360)
                      ++... +.+-.|+..+. |.++++-.+
T Consensus       175 ~f~lg-sq~EgcvvDd~~g~Lyv~eEd  200 (355)
T 3amr_A          175 AFKMN-SQTEGMAADDEYGRLYIAEED  200 (355)
T ss_dssp             EEECS-SCEEEEEEETTTTEEEEEETT
T ss_pred             EecCC-CCcceEEEcCCCCeEEEeccc
Confidence            77654 46777777764 555554444

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=96.19  E-value=0.059  Score=52.64  Aligned_cols=117  Identities=15%  Similarity=0.203  Sum_probs=75.1

Q ss_pred             EEEECC-CCCEEEEEeCCC-----------cEEEEECCCCe--EEEEEe-CCCcCeEEEEEeeCCCEEEEEeC-CCcEEE
Q psy11015        185 DVAVRP-GQPVLGSASADR-----------TVRLWSTQTGK--CVLQYS-GHSGSVNSVRFLPNKDLVLSASG-DKSVHI  248 (360)
Q Consensus       185 ~l~~~~-~~~~l~sgs~Dg-----------~v~iwd~~~~~--~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~-d~~i~v  248 (360)
                      ++++.+ ++.+++.|+.++           .+.+||..+++  .+..+. .+.....++++.+++.+++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            456666 788888887653           58899998774  233332 23333445777789999999884 458999


Q ss_pred             EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CC-----CcEEEEECC
Q psy11015        249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WD-----RVANLFDVE  322 (360)
Q Consensus       249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~d-----g~i~iwd~~  322 (360)
                      ||..++.-.                          .+..+.. ...-.+++..++|+.++.|+ .+     ..+.+||..
T Consensus       270 yd~~t~~W~--------------------------~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~  322 (656)
T 1k3i_A          270 YDSSSDSWI--------------------------PGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS  322 (656)
T ss_dssp             EEGGGTEEE--------------------------ECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred             ecCcCCcee--------------------------ECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence            998766221                          1111111 11112455667899988888 44     569999998


Q ss_pred             CCeEEE
Q psy11015        323 TGTILQ  328 (360)
Q Consensus       323 ~~~~~~  328 (360)
                      +.....
T Consensus       323 t~~W~~  328 (656)
T 1k3i_A          323 SKTWTS  328 (656)
T ss_dssp             TTEEEE
T ss_pred             CCccee
Confidence            876543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.15  E-value=0.58  Score=42.65  Aligned_cols=138  Identities=12%  Similarity=0.088  Sum_probs=82.3

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEEeCC----CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCC
Q psy11015        191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGH----SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDS  266 (360)
Q Consensus       191 ~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h----~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~  266 (360)
                      +|..++.+- ++.||.-++..+..-+.+..-    -+.|..+..+|+|+++|.. ++..|.|-.+..+.....       
T Consensus        31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~-------  101 (452)
T 3pbp_A           31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVE-------  101 (452)
T ss_dssp             TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCC-------
T ss_pred             CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCc-------
Confidence            344444443 367777777644333333321    2257889999999988776 566899988763311000       


Q ss_pred             CCCCCCCCCCCccccccceeEee------CCCCcEEEEEEcCC---CCEEEEEECCCcEEEEECCCCe--EEEEEe----
Q psy11015        267 DLDESKEPDESSITLRTPVKELL------GHSNVVIAADWLSD---GEQVITASWDRVANLFDVETGT--ILQSLT----  331 (360)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~i~~sp~---g~~l~tgs~dg~i~iwd~~~~~--~~~~l~----  331 (360)
                              .. .....-....+.      ....+|..+-|+|-   |..|++-..|++|++||+....  +. .+.    
T Consensus       102 --------~~-~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~  171 (452)
T 3pbp_A          102 --------DV-SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN  171 (452)
T ss_dssp             --------CH-HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS
T ss_pred             --------cc-ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc
Confidence                    00 000000011111      13568999999994   5689999999999999997521  22 332    


Q ss_pred             -----cCCCceEEEEEcCCCC
Q psy11015        332 -----EPGEAIRAAAGRTGGP  347 (360)
Q Consensus       332 -----~h~~~v~~~~~~~~g~  347 (360)
                           .....|.+++|.++|.
T Consensus       172 ~fg~d~~~~ev~S~~Fg~~~l  192 (452)
T 3pbp_A          172 SFGLDARVNDITDLEFSKDGL  192 (452)
T ss_dssp             EEESCSSCCCEEEEEECTTSS
T ss_pred             ccCCCcccceEEEEEEcCCCc
Confidence                 1236789999998775

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=96.09  E-value=0.31  Score=42.33  Aligned_cols=85  Identities=12%  Similarity=0.048  Sum_probs=56.4

Q ss_pred             CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC
Q psy11015        212 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH  291 (360)
Q Consensus       212 ~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h  291 (360)
                      .+.+..+.. ......++|+|+++++++...++.|..||.....                             ...+ ..
T Consensus        22 ~~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-----------------------------~~~~-~~   70 (306)
T 2p4o_A           22 AKIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-----------------------------QIHA-TV   70 (306)
T ss_dssp             EEEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-----------------------------EEEE-EC
T ss_pred             ceEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce-----------------------------EEEE-eC
Confidence            344555543 2567899999999977777788899999865431                             1111 12


Q ss_pred             CCcEEEEEEcCCCCEEEEEECC-C-cEEEEECCCCeEE
Q psy11015        292 SNVVIAADWLSDGEQVITASWD-R-VANLFDVETGTIL  327 (360)
Q Consensus       292 ~~~v~~i~~sp~g~~l~tgs~d-g-~i~iwd~~~~~~~  327 (360)
                      ...+.++++.++|+.+++.... + .|..+|..+++..
T Consensus        71 ~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~  108 (306)
T 2p4o_A           71 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  108 (306)
T ss_dssp             SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence            2468899999999976655443 2 4667787777654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.99  E-value=1.5  Score=43.77  Aligned_cols=117  Identities=11%  Similarity=-0.047  Sum_probs=74.7

Q ss_pred             CCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CC-CcEEEEEcccCe
Q psy11015        179 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GD-KSVHIWQAVINW  255 (360)
Q Consensus       179 h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d-~~i~vwd~~~~~  255 (360)
                      .......|++.+.+. ++++-...+.|.+.++........+.........|++.|.+..|+... .. +.|.+.++... 
T Consensus       469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-  547 (791)
T 3m0c_C          469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-  547 (791)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred             CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-
Confidence            345567889987664 555666778999999875544444444455689999999755444443 33 66777776533 


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECCCC
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETG  324 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~~~  324 (360)
                                                  ....+ ...-.....|++.+.+..|+.+.. .+.|..+++...
T Consensus       548 ----------------------------~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~  590 (791)
T 3m0c_C          548 ----------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG  590 (791)
T ss_dssp             ----------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             ----------------------------ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence                                        11122 122346788999877777766543 467888887643

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=95.98  E-value=0.74  Score=40.35  Aligned_cols=139  Identities=4%  Similarity=-0.189  Sum_probs=82.2

Q ss_pred             CCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC--CCcEEEEEcccCeeE
Q psy11015        181 DGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG--DKSVHIWQAVINWEC  257 (360)
Q Consensus       181 ~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~--d~~i~vwd~~~~~~~  257 (360)
                      .....+++.+. +.++++-...+.|.++++........+.........+++.|.+..++.+..  .+.|...++...   
T Consensus        79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---  155 (318)
T 3sov_A           79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS---  155 (318)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC---
T ss_pred             CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC---
Confidence            34567888874 445566667789999998754333333344556899999986555554442  466776665422   


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEecCCC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPGE  335 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~~  335 (360)
                                                ....+ ...-...+.++|+|++..|+.+. ..+.|..+|+........+...-.
T Consensus       156 --------------------------~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~  209 (318)
T 3sov_A          156 --------------------------SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLP  209 (318)
T ss_dssp             --------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCS
T ss_pred             --------------------------CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCC
Confidence                                      11111 12234568999999777776554 467899999864322222222334


Q ss_pred             ceEEEEEcCCCCE
Q psy11015        336 AIRAAAGRTGGPI  348 (360)
Q Consensus       336 ~v~~~~~~~~g~~  348 (360)
                      ...++++..++-+
T Consensus       210 ~P~glav~~~~ly  222 (318)
T 3sov_A          210 HPFALTLFEDILY  222 (318)
T ss_dssp             CEEEEEEETTEEE
T ss_pred             CceEEEEeCCEEE
Confidence            4566666544333

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=95.96  E-value=0.27  Score=47.41  Aligned_cols=76  Identities=12%  Similarity=0.043  Sum_probs=54.1

Q ss_pred             EEEECCCCCEEEEEeCC----------------CcEEEEECCCCeEEEEEeCCCc----------CeEEEEEe-eCC---
Q psy11015        185 DVAVRPGQPVLGSASAD----------------RTVRLWSTQTGKCVLQYSGHSG----------SVNSVRFL-PNK---  234 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~D----------------g~v~iwd~~~~~~~~~~~~h~~----------~v~~i~~~-p~~---  234 (360)
                      .+++.+....++.+..+                +.|..+|..+|+.+..++....          ++. +... .+|   
T Consensus       245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~  323 (599)
T 1w6s_A          245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR  323 (599)
T ss_dssp             CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred             ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence            34666777777777655                3899999999999888874321          121 2222 457   


Q ss_pred             CEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        235 DLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       235 ~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      ..++.++.+|.+.++|..+|.......
T Consensus       324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~  350 (599)
T 1w6s_A          324 KLLTHPDRNGIVYTLDRTDGALVSANK  350 (599)
T ss_dssp             EEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEEEECCCcEEEEEECCCCCEeeccc
Confidence            467778999999999999998776543

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=95.86  E-value=0.2  Score=48.17  Aligned_cols=77  Identities=6%  Similarity=-0.077  Sum_probs=53.9

Q ss_pred             EEEECCCCCEEEEEeC--------------------C----CcEEEEECCCCeEEEEEeC--CC--------cCeEEEEE
Q psy11015        185 DVAVRPGQPVLGSASA--------------------D----RTVRLWSTQTGKCVLQYSG--HS--------GSVNSVRF  230 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~--------------------D----g~v~iwd~~~~~~~~~~~~--h~--------~~v~~i~~  230 (360)
                      .++++|....++.+..                    |    +.|..+|..+|+.+..++.  |.        .++. +..
T Consensus       250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~  328 (582)
T 1flg_A          250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY  328 (582)
T ss_dssp             CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred             CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence            3567777777776653                    2    6899999999999988863  22        1121 122


Q ss_pred             e-eCCC---EEEEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015        231 L-PNKD---LVLSASGDKSVHIWQAVINWECLVSNN  262 (360)
Q Consensus       231 ~-p~~~---~l~s~s~d~~i~vwd~~~~~~~~~~~~  262 (360)
                      . .+|+   .++.++.+|.+.++|..+|........
T Consensus       329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~  364 (582)
T 1flg_A          329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF  364 (582)
T ss_dssp             ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred             ecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence            1 3664   788899999999999999987766544

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=95.82  E-value=0.16  Score=44.66  Aligned_cols=119  Identities=8%  Similarity=-0.031  Sum_probs=78.5

Q ss_pred             EEEEEE---CCCCCEEEEEe-------------CCCcEEEEECC---CCeEEEEEe--CC-----------CcCeEEEEE
Q psy11015        183 VWDVAV---RPGQPVLGSAS-------------ADRTVRLWSTQ---TGKCVLQYS--GH-----------SGSVNSVRF  230 (360)
Q Consensus       183 V~~l~~---~~~~~~l~sgs-------------~Dg~v~iwd~~---~~~~~~~~~--~h-----------~~~v~~i~~  230 (360)
                      +..|.|   .|++.++++..             .+..|..||+.   +++.+....  +.           ......++.
T Consensus        65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav  144 (334)
T 2p9w_A           65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ  144 (334)
T ss_dssp             EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred             eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence            578899   68876666543             26789999999   787665543  11           134889999


Q ss_pred             eeCCCEEEEEeCC-CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        231 LPNKDLVLSASGD-KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       231 ~p~~~~l~s~s~d-~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      .++|+..++++.. +.|...+..........                       ............+.|+++|+|+.|++
T Consensus       145 D~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~-----------------------~~~~~~~~~~G~nGIv~~pdg~~Liv  201 (334)
T 2p9w_A          145 DRDGNSYVAFALGMPAIARVSADGKTVSTFA-----------------------WESGNGGQRPGYSGITFDPHSNKLIA  201 (334)
T ss_dssp             CTTSCEEEEEEESSCEEEEECTTSCCEEEEE-----------------------ECCCCSSSCCSCSEEEEETTTTEEEE
T ss_pred             CCCCCEEEeCCCCCCeEEEEeCCCCEEeeee-----------------------ecCCCcccccCcceEEEeCCCCEEEE
Confidence            9999999988877 77655554322100000                       00000111224678999999999888


Q ss_pred             EECCCcEEEEECCCC
Q psy11015        310 ASWDRVANLFDVETG  324 (360)
Q Consensus       310 gs~dg~i~iwd~~~~  324 (360)
                      ...+|.|.-+|+.+.
T Consensus       202 ~~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          202 FGGPRALTAFDVSKP  216 (334)
T ss_dssp             ESSSSSEEEEECSSS
T ss_pred             EcCCCeEEEEcCCCC
Confidence            866999999998743

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=95.82  E-value=0.86  Score=39.79  Aligned_cols=140  Identities=9%  Similarity=-0.092  Sum_probs=84.3

Q ss_pred             CCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-C-CcEEEEEcccCeeE
Q psy11015        181 DGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-D-KSVHIWQAVINWEC  257 (360)
Q Consensus       181 ~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d-~~i~vwd~~~~~~~  257 (360)
                      .....+++++.+ .+.++-...+.|.+.+.........+.........++++|.+..++.+.. . +.|...++...   
T Consensus        77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~---  153 (316)
T 1ijq_A           77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---  153 (316)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred             CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC---
Confidence            456788998744 45556667889999998755443334434456899999986655544443 3 56777766422   


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEE-ec--
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSL-TE--  332 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l-~~--  332 (360)
                                                ....+ ...-.....++|+|++..|+.+. ..+.|..+|+.... ...+ ..  
T Consensus       154 --------------------------~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~  206 (316)
T 1ijq_A          154 --------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEK  206 (316)
T ss_dssp             --------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTT
T ss_pred             --------------------------CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCC
Confidence                                      11112 12234678999998877776554 45789999986432 2333 21  


Q ss_pred             CCCceEEEEEcCCCCEEEc
Q psy11015        333 PGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las  351 (360)
                      .-.....+++.. +.+..+
T Consensus       207 ~~~~P~giav~~-~~ly~~  224 (316)
T 1ijq_A          207 RLAHPFSLAVFE-DKVFWT  224 (316)
T ss_dssp             TTSSEEEEEEET-TEEEEE
T ss_pred             ccCCcEEEEEEC-CEEEEE
Confidence            123456777753 444433

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=95.80  E-value=1.1  Score=40.74  Aligned_cols=136  Identities=11%  Similarity=-0.078  Sum_probs=84.0

Q ss_pred             CCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-C-CCcEEEEEcccCe
Q psy11015        179 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-G-DKSVHIWQAVINW  255 (360)
Q Consensus       179 h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~-d~~i~vwd~~~~~  255 (360)
                      .......+++.+ .+++.++-...+.|.+.+++.......+...-.....|++.|.+..|+... . .+.|...++... 
T Consensus       157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-  235 (400)
T 3p5b_L          157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-  235 (400)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-
T ss_pred             CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-
Confidence            345678899987 455666666778999999886654444444445689999999655554443 3 367777776532 


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEec-
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTE-  332 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~-  332 (360)
                                                  ....+ ...-.....++++|++..|+.+. ..+.|..+|+........+.. 
T Consensus       236 ----------------------------~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~  287 (400)
T 3p5b_L          236 ----------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE  287 (400)
T ss_dssp             ----------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECS
T ss_pred             ----------------------------ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCC
Confidence                                        11122 22234678999998888776664 457899999864432222222 


Q ss_pred             -CCCceEEEEEc
Q psy11015        333 -PGEAIRAAAGR  343 (360)
Q Consensus       333 -h~~~v~~~~~~  343 (360)
                       .-....++++.
T Consensus       288 ~~l~~P~gl~v~  299 (400)
T 3p5b_L          288 KRLAHPFSLAVF  299 (400)
T ss_dssp             STTSSEEEEEEE
T ss_pred             CCCCCCEEEEEe
Confidence             12334566664

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=95.69  E-value=0.15  Score=45.62  Aligned_cols=53  Identities=17%  Similarity=0.266  Sum_probs=34.6

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE-------eCCCcCeEEEEEeeC
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFLPN  233 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-------~~h~~~v~~i~~~p~  233 (360)
                      -...+.|+|.|+++.|+.+...|.|++++.. +.....+       ....+....|+|+|+
T Consensus        17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd   76 (353)
T 2g8s_A           17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD   76 (353)
T ss_dssp             ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred             CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence            3457899999999834445567999999853 4321111       112345789999995

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=95.66  E-value=0.49  Score=42.04  Aligned_cols=127  Identities=10%  Similarity=0.124  Sum_probs=84.7

Q ss_pred             CCEEEEEE--CCC-CC-EEEEEeCCCcEEEEECC-------CCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        181 DGVWDVAV--RPG-QP-VLGSASADRTVRLWSTQ-------TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       181 ~~V~~l~~--~~~-~~-~l~sgs~Dg~v~iwd~~-------~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      ..++.+|+  +|. +. +++....+|.+..|++.       +++.++.|. ..+.+..+...+....|+.+-.+.-|..+
T Consensus       128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~  206 (355)
T 3amr_A          128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKF  206 (355)
T ss_dssp             SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred             CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEE
Confidence            56677776  774 43 68888899999999882       336677777 35678899999888899999998665555


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCC-CCcEEEEEE--cCCCC-EEEEEE-CCCcEEEEECC-
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGH-SNVVIAADW--LSDGE-QVITAS-WDRVANLFDVE-  322 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~i~~--sp~g~-~l~tgs-~dg~i~iwd~~-  322 (360)
                      +.....                       ....+.+..+ .++ ...+..+++  .++|+ +|+++| .+.++.+||.. 
T Consensus       207 da~p~~-----------------------~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~  263 (355)
T 3amr_A          207 SAEPDG-----------------------GSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG  263 (355)
T ss_dssp             ECSTTS-----------------------CSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred             eCCcCC-----------------------CCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence            533110                       0001122222 122 236888888  45555 777666 56799999996 


Q ss_pred             CCeEEEEEe
Q psy11015        323 TGTILQSLT  331 (360)
Q Consensus       323 ~~~~~~~l~  331 (360)
                      +.+.+..|.
T Consensus       264 ~~~~vg~f~  272 (355)
T 3amr_A          264 KNKYVADFR  272 (355)
T ss_dssp             TCCEEEEEE
T ss_pred             CCcEEEEEE
Confidence            777788774

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=95.50  E-value=0.33  Score=40.07  Aligned_cols=143  Identities=9%  Similarity=-0.046  Sum_probs=78.8

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE------EEEE-e-CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC------VLQY-S-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI  253 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~------~~~~-~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~  253 (360)
                      .+.+++|+|++.+.+.  .+|.+.-.+..+...      -..+ . +-.. ..++.|.|+|.+.++  .||.|.-++..+
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~  116 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ  116 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence            5669999998875555  677766656544110      1111 1 1111 468899999987777  568877665322


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe------EE
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT------IL  327 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~------~~  327 (360)
                      ..                   .......  -...-.+--..+..+.|.|+|...+..  ||.+.-+...++.      ..
T Consensus       117 ~~-------------------~~~Wl~~--a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~  173 (236)
T 1tl2_A          117 SD-------------------TDNWIAR--ATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARA  173 (236)
T ss_dssp             ST-------------------TCCHHHH--SEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHC
T ss_pred             CC-------------------CCceecc--ccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCccccccc
Confidence            10                   0000000  011111222467899999999877766  7775444333221      11


Q ss_pred             EEEe-cCCCceEEEEEcCCCCEEEcc
Q psy11015        328 QSLT-EPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       328 ~~l~-~h~~~v~~~~~~~~g~~las~  352 (360)
                      ..+. .....-+.+.|.++|.+.+..
T Consensus       174 ~~~g~~g~~~yr~l~f~~~G~l~~v~  199 (236)
T 1tl2_A          174 TKIGQGGWDTFKFLFFSSVGTLFGVQ  199 (236)
T ss_dssp             EEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred             ceeccCCcceEEEEEECCCCcEEEEe
Confidence            2222 233345567799999877655

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=95.46  E-value=1.3  Score=39.46  Aligned_cols=142  Identities=13%  Similarity=0.071  Sum_probs=84.8

Q ss_pred             CCEEEEEECC--CCC--EEEEEeC--CCcEEEEECCCC----eEEEEEeCC-CcCeEEEEEeeCCCEEEEEeC---C---
Q psy11015        181 DGVWDVAVRP--GQP--VLGSASA--DRTVRLWSTQTG----KCVLQYSGH-SGSVNSVRFLPNKDLVLSASG---D---  243 (360)
Q Consensus       181 ~~V~~l~~~~--~~~--~l~sgs~--Dg~v~iwd~~~~----~~~~~~~~h-~~~v~~i~~~p~~~~l~s~s~---d---  243 (360)
                      .....+.+.+  ++.  +++.-..  +.+|.+|++..+    ..+..+.+. -...+++.+.++|.+.++...   |   
T Consensus       112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~  191 (355)
T 3sre_A          112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYL  191 (355)
T ss_dssp             CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHH
T ss_pred             eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccc
Confidence            4566777654  343  3333333  567888877643    234445432 235899999999987776541   1   


Q ss_pred             ---------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CC
Q psy11015        244 ---------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WD  313 (360)
Q Consensus       244 ---------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~d  313 (360)
                               ..-.||.+..+                             .+..+...-...+.++|+||+++++.+. ..
T Consensus       192 ~~~e~~~~~~~g~vyr~d~~-----------------------------~~~~~~~~l~~pNGia~spDg~~lYvadt~~  242 (355)
T 3sre_A          192 KSWEMHLGLAWSFVTYYSPN-----------------------------DVRVVAEGFDFANGINISPDGKYVYIAELLA  242 (355)
T ss_dssp             HHHHHHTTCCCEEEEEECTT-----------------------------CCEEEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred             ccchhhccCCccEEEEEECC-----------------------------eEEEeecCCcccCcceECCCCCEEEEEeCCC
Confidence                     12334433221                             1122222234578999999999887664 56


Q ss_pred             CcEEEEECC-CCeE--EEEEecCCCceEEEEEcC-CCCEEEcc
Q psy11015        314 RVANLFDVE-TGTI--LQSLTEPGEAIRAAAGRT-GGPIRASP  352 (360)
Q Consensus       314 g~i~iwd~~-~~~~--~~~l~~h~~~v~~~~~~~-~g~~las~  352 (360)
                      +.|..|++. .+..  ...+ ...+....+++.+ +|++.+++
T Consensus       243 ~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~  284 (355)
T 3sre_A          243 HKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC  284 (355)
T ss_dssp             TEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred             CeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence            889999986 3432  2234 2345678899998 58876654

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=95.45  E-value=0.69  Score=41.28  Aligned_cols=137  Identities=13%  Similarity=0.160  Sum_probs=81.0

Q ss_pred             cceeeeeeeecCC-CCEEEEEECCCCCEEEEEeC---C------------CcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015        168 LSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASA---D------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       168 ~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~sgs~---D------------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~  231 (360)
                      .....+.++.+.. ...+++.+.++|.+.++..-   |            ..=++|.+..++...... .-...+.|+|+
T Consensus       151 ~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~-~l~~pNGia~s  229 (355)
T 3sre_A          151 KSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-GFDFANGINIS  229 (355)
T ss_dssp             TEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEE-EESSEEEEEEC
T ss_pred             CEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeec-CCcccCcceEC
Confidence            4445666666643 35789999999987777641   1            222344333343332233 33567899999


Q ss_pred             eCCCEEEEE-eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEE
Q psy11015        232 PNKDLVLSA-SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVIT  309 (360)
Q Consensus       232 p~~~~l~s~-s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~t  309 (360)
                      ||++.++.+ +..+.|..|++.......                         ....+ ...+..-.+++.+ +|++.++
T Consensus       230 pDg~~lYvadt~~~~I~~~~~~~~g~l~-------------------------~~~~~-~~~g~PDGi~vD~e~G~lwva  283 (355)
T 3sre_A          230 PDGKYVYIAELLAHKIHVYEKHANWTLT-------------------------PLRVL-SFDTLVDNISVDPVTGDLWVG  283 (355)
T ss_dssp             TTSSEEEEEEGGGTEEEEEEECTTSCEE-------------------------EEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred             CCCCEEEEEeCCCCeEEEEEECCCCcEe-------------------------cCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence            999876655 467889999986321110                         11222 1245677899998 5988887


Q ss_pred             EECCC-cEEEEECC--CCeEEEEEe
Q psy11015        310 ASWDR-VANLFDVE--TGTILQSLT  331 (360)
Q Consensus       310 gs~dg-~i~iwd~~--~~~~~~~l~  331 (360)
                      +..+| .|..|+..  .+..+..+.
T Consensus       284 ~~~~g~~v~~~~P~~~~~s~v~rI~  308 (355)
T 3sre_A          284 CHPNGMRIFFYDAENPPGSEVLRIQ  308 (355)
T ss_dssp             EESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred             ecCCceEEEEECCCCCCCCEEEEEE
Confidence            76553 34444433  244444444

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=95.28  E-value=0.46  Score=46.29  Aligned_cols=94  Identities=6%  Similarity=0.000  Sum_probs=57.3

Q ss_pred             eeecCccceeeeeeeec-CCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEEEeCCC-cCeEEEEEeeCCCEEE
Q psy11015        162 SFKTSLLSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLPNKDLVL  238 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~~~~~~~~~~h~-~~v~~i~~~p~~~~l~  238 (360)
                      .|+........+..+.. +.....++++.+++.+++.|+. ++.+.+||..+..-...-.-+. ..-.+++..+++++++
T Consensus       223 ~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv  302 (656)
T 1k3i_A          223 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFT  302 (656)
T ss_dssp             EECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEE
T ss_pred             EEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEE
Confidence            34444444444444432 2233445677888999999884 4589999998765332211111 1123455667899888


Q ss_pred             EEe-CC-----CcEEEEEcccCe
Q psy11015        239 SAS-GD-----KSVHIWQAVINW  255 (360)
Q Consensus       239 s~s-~d-----~~i~vwd~~~~~  255 (360)
                      .|+ .+     ..+.+||..++.
T Consensus       303 ~GG~~~~~~~~~~~e~yd~~t~~  325 (656)
T 1k3i_A          303 IGGSWSGGVFEKNGEVYSPSSKT  325 (656)
T ss_dssp             ECCCCCSSSCCCCEEEEETTTTE
T ss_pred             EeCcccCCcccccceEeCCCCCc
Confidence            888 44     568999998764

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=94.93  E-value=2.2  Score=41.21  Aligned_cols=138  Identities=7%  Similarity=-0.097  Sum_probs=82.1

Q ss_pred             CCCEEEEEECCCCCEEE-EEeCCCcEEEEECCCCeE-EEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCee
Q psy11015        180 RDGVWDVAVRPGQPVLG-SASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~-sgs~Dg~v~iwd~~~~~~-~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~  256 (360)
                      -....+|+|++.+..|+ +-...+.|..+++..... ...+.........+++.+.+. ++++-...+.|.+.++.... 
T Consensus        39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-  117 (619)
T 3s94_A           39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-  117 (619)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-
Confidence            44578999998666555 444567888888875432 233333335788999998555 55555667889999876441 


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEEe-c
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSLT-E  332 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l~-~  332 (360)
                                                  ...+. ..-.....+++.|.+.+|+...+  .+.|...++. |.....+. .
T Consensus       118 ----------------------------~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~  168 (619)
T 3s94_A          118 ----------------------------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINS  168 (619)
T ss_dssp             ----------------------------CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECS
T ss_pred             ----------------------------EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEEEEeC
Confidence                                        11121 22334668889887666665554  3566666655 33223332 2


Q ss_pred             CCCceEEEEEcCCCC
Q psy11015        333 PGEAIRAAAGRTGGP  347 (360)
Q Consensus       333 h~~~v~~~~~~~~g~  347 (360)
                      .-...+.+++++++.
T Consensus       169 ~~~~P~Glald~~~~  183 (619)
T 3s94_A          169 EIYWPNGLTLDYEEQ  183 (619)
T ss_dssp             SCSSEEEEEEETTTT
T ss_pred             CCCCCcEEEEEccCC
Confidence            334568888887543

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=94.80  E-value=3  Score=40.31  Aligned_cols=138  Identities=5%  Similarity=-0.123  Sum_probs=86.7

Q ss_pred             CCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeE
Q psy11015        180 RDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      -..+.+|+|++.+.. +.+-..++.|..+++........+.........+++.+.+. ++++-...+.|.+.++....  
T Consensus        36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~--  113 (628)
T 4a0p_A           36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH--  113 (628)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT--
T ss_pred             CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc--
Confidence            346789999986554 45556678999999875544344443334577889987654 55555667788888876431  


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEEecCC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSLTEPG  334 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l~~h~  334 (360)
                                                 ...+. ..-.....+++.|...+|+...+  .+.|...++.... ...+...-
T Consensus       114 ---------------------------~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~  165 (628)
T 4a0p_A          114 ---------------------------RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNV  165 (628)
T ss_dssp             ---------------------------CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSC
T ss_pred             ---------------------------EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCC
Confidence                                       11111 23345689999986666665554  4567777765333 33333344


Q ss_pred             CceEEEEEcCCCC
Q psy11015        335 EAIRAAAGRTGGP  347 (360)
Q Consensus       335 ~~v~~~~~~~~g~  347 (360)
                      .....+++++++.
T Consensus       166 ~~P~GlalD~~~~  178 (628)
T 4a0p_A          166 GRANGLTIDYAKR  178 (628)
T ss_dssp             SSEEEEEEETTTT
T ss_pred             CCcceEEEccccC
Confidence            5678899988644

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=94.42  E-value=0.87  Score=40.51  Aligned_cols=106  Identities=6%  Similarity=-0.008  Sum_probs=62.1

Q ss_pred             CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      -...+.++|.|+|+++++ ..++.|.+++  .+......                       .+............++|+
T Consensus        30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~-----------------------~~~v~~~g~~~p~gia~~   83 (352)
T 2ism_A           30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYA-----------------------ELSVYHRGESGLLGLALH   83 (352)
T ss_dssp             CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEE-----------------------ECCCCCSTTCSEEEEEEC
T ss_pred             CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEee-----------------------cceEeecCCCCceeEEEC
Confidence            345789999999985554 5678999888  33211100                       000111223567899999


Q ss_pred             CC---CCEEEEEEC-C-----CcEEEEECCCCe-----EE-EEEe---cCCCceEEEEEcCCCCEEEccc
Q psy11015        302 SD---GEQVITASW-D-----RVANLFDVETGT-----IL-QSLT---EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       302 p~---g~~l~tgs~-d-----g~i~iwd~~~~~-----~~-~~l~---~h~~~v~~~~~~~~g~~las~~  353 (360)
                      |+   +..|+.+.. .     +.|..|+...+.     .+ ..+.   ........++|.|+|.+.++..
T Consensus        84 pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A           84 PRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             TTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred             CCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence            98   555544433 2     567778766431     11 2233   1112346899999998777654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=94.32  E-value=0.85  Score=42.63  Aligned_cols=70  Identities=7%  Similarity=-0.012  Sum_probs=47.4

Q ss_pred             EEEEEECCC-CCEEEEEeCCCcEEEEECC-------CCeE-----------EEE-Ee-CCCcCeEEEEEeeCCCE-EEEE
Q psy11015        183 VWDVAVRPG-QPVLGSASADRTVRLWSTQ-------TGKC-----------VLQ-YS-GHSGSVNSVRFLPNKDL-VLSA  240 (360)
Q Consensus       183 V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~-------~~~~-----------~~~-~~-~h~~~v~~i~~~p~~~~-l~s~  240 (360)
                      ...++++|+ +.++++-..++.|..+|+.       ++..           ... +. +.......|+|+|+|+. +++-
T Consensus       249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD  328 (496)
T 3kya_A          249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV  328 (496)
T ss_dssp             CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred             ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence            357788994 5566667778889999987       4543           112 22 22345689999999995 4555


Q ss_pred             eCCCcEEEEEcc
Q psy11015        241 SGDKSVHIWQAV  252 (360)
Q Consensus       241 s~d~~i~vwd~~  252 (360)
                      +..+.|+.++..
T Consensus       329 ~~~h~I~kid~d  340 (496)
T 3kya_A          329 INNHYFMRSDYD  340 (496)
T ss_dssp             TTTTEEEEEEEE
T ss_pred             CCCCEEEEEecC
Confidence            667788886654

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=94.03  E-value=2.6  Score=36.05  Aligned_cols=108  Identities=10%  Similarity=0.074  Sum_probs=56.9

Q ss_pred             CCCEEEEEeCC-----CcEEEEECCCCeE--EEEEeCCCcCeEEEEEeeCCCEEEEEeCC-----CcEEEEEcccCeeEe
Q psy11015        191 GQPVLGSASAD-----RTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVINWECL  258 (360)
Q Consensus       191 ~~~~l~sgs~D-----g~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~~~~l~s~s~d-----~~i~vwd~~~~~~~~  258 (360)
                      ++.+++.|+.+     ..+.+||+.+.+-  +..+.........+.+  ++.+++.|+.+     ..+.+||+.++.-..
T Consensus       112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~  189 (301)
T 2vpj_A          112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN  189 (301)
T ss_dssp             TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence            45667777654     3588899887643  2222211111122222  67777777654     357788877652221


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-----CcEEEEECCCCeEEE
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGTILQ  328 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-----g~i~iwd~~~~~~~~  328 (360)
                                                +..+.........+.+  ++..++.|+.+     ..+.+||+.+.+...
T Consensus       190 --------------------------~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~  236 (301)
T 2vpj_A          190 --------------------------VTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT  236 (301)
T ss_dssp             --------------------------ECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             --------------------------CCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence                                      1111111111112222  56666777664     468999998877543

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=93.92  E-value=2.2  Score=36.56  Aligned_cols=134  Identities=11%  Similarity=0.077  Sum_probs=65.1

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCC
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR-----TVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKD  235 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg-----~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~  235 (360)
                      |+........+..+......-.++.+  ++.+++.|+.++     .+.+||+.+..-...  +.........+.+  ++.
T Consensus        82 ~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~  157 (302)
T 2xn4_A           82 YDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGL  157 (302)
T ss_dssp             EETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE
T ss_pred             ECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCE
Confidence            44444444444443332222223333  456777777653     477888877643222  1111111122222  566


Q ss_pred             EEEEEeCC-------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015        236 LVLSASGD-------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI  308 (360)
Q Consensus       236 ~l~s~s~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~  308 (360)
                      +++.|+.+       ..+.+||+.++.-..                          +..+.........+.+  ++..++
T Consensus       158 iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~--------------------------~~~~p~~r~~~~~~~~--~~~iyv  209 (302)
T 2xn4_A          158 LYAVGGYDVASRQCLSTVECYNATTNEWTY--------------------------IAEMSTRRSGAGVGVL--NNLLYA  209 (302)
T ss_dssp             EEEECCEETTTTEECCCEEEEETTTTEEEE--------------------------ECCCSSCCBSCEEEEE--TTEEEE
T ss_pred             EEEEeCCCCCCCccccEEEEEeCCCCcEEE--------------------------CCCCccccccccEEEE--CCEEEE
Confidence            66666543       347788877652221                          1111100111122222  566777


Q ss_pred             EEECC-----CcEEEEECCCCeEEE
Q psy11015        309 TASWD-----RVANLFDVETGTILQ  328 (360)
Q Consensus       309 tgs~d-----g~i~iwd~~~~~~~~  328 (360)
                      .|+.+     ..+.+||..+.+...
T Consensus       210 ~GG~~~~~~~~~~~~yd~~~~~W~~  234 (302)
T 2xn4_A          210 VGGHDGPLVRKSVEVYDPTTNAWRQ  234 (302)
T ss_dssp             ECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred             ECCCCCCcccceEEEEeCCCCCEee
Confidence            77664     368999998876543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=93.83  E-value=0.34  Score=40.03  Aligned_cols=136  Identities=7%  Similarity=-0.121  Sum_probs=73.7

Q ss_pred             CEEEEEeCCCcEEEEECCCCe------EEEEEeC-CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCC
Q psy11015        193 PVLGSASADRTVRLWSTQTGK------CVLQYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDND  265 (360)
Q Consensus       193 ~~l~sgs~Dg~v~iwd~~~~~------~~~~~~~-h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~  265 (360)
                      ..|+....| +|++=....+.      ....+-. -=..+.+++|+|+|.+.+.  .++.+.-.+..+..          
T Consensus         5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~----------   71 (236)
T 1tl2_A            5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHD----------   71 (236)
T ss_dssp             CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCST----------
T ss_pred             eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCC----------
Confidence            356666667 66655544432      1122211 1236779999999986666  55654333322110          


Q ss_pred             CCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE-------EEEEecCCCc
Q psy11015        266 SDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI-------LQSLTEPGEA  336 (360)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~-------~~~l~~h~~~  336 (360)
                                  .......-..+-  +.. .-.++.|.|+|.+.++  .||.|.-++-.+...       ...-..--..
T Consensus        72 ------------~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~  136 (236)
T 1tl2_A           72 ------------NDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSG  136 (236)
T ss_dssp             ------------TCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGG
T ss_pred             ------------cccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCc
Confidence                        000000111110  111 1467889999987777  569988887643211       1111122357


Q ss_pred             eEEEEEcCCCCEEEcccccch
Q psy11015        337 IRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       337 v~~~~~~~~g~~las~~~~~i  357 (360)
                      +..+.+.|+|.+-|.. ++.+
T Consensus       137 ~~~lff~p~G~Lyav~-dg~l  156 (236)
T 1tl2_A          137 FKFLFFHPNGYLYAVH-GQQF  156 (236)
T ss_dssp             EEEEEECTTSCEEEEE-TTEE
T ss_pred             eEEEEECCCceEEEEe-CCcE
Confidence            8999999999988777 6544

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=93.49  E-value=0.12  Score=50.97  Aligned_cols=135  Identities=10%  Similarity=-0.102  Sum_probs=74.2

Q ss_pred             CCEEEEEECCCCCEEEEEe-C-CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeE
Q psy11015        181 DGVWDVAVRPGQPVLGSAS-A-DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs-~-Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      .....++++|.+..|+.+. . .+.|.++++........+...-...+.|+|+|++. ++++-+..+.|.++++......
T Consensus       496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~  575 (699)
T 1n7d_A          496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK  575 (699)
T ss_dssp             CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE
T ss_pred             CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE
Confidence            4457888998655444433 2 26777777653322222222234567899998754 5555566778888887532111


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCce
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI  337 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v  337 (360)
                      .                          +....+.-....++++..+ ..+++....+.|..+|..+|+.+..+.......
T Consensus       576 ~--------------------------~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P  628 (699)
T 1n7d_A          576 T--------------------------ILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSP  628 (699)
T ss_dssp             E--------------------------ECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSC
T ss_pred             E--------------------------EEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCC
Confidence            0                          1000011122334555432 344455556889999988888877775433334


Q ss_pred             EEEEE
Q psy11015        338 RAAAG  342 (360)
Q Consensus       338 ~~~~~  342 (360)
                      +.+++
T Consensus       629 ~~i~v  633 (699)
T 1n7d_A          629 EDMVL  633 (699)
T ss_dssp             CCCCB
T ss_pred             cEEEE
Confidence            44544

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=93.23  E-value=0.15  Score=50.26  Aligned_cols=112  Identities=12%  Similarity=-0.071  Sum_probs=65.1

Q ss_pred             EEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCC-CcEEEEEcccCeeEee
Q psy11015        183 VWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGD-KSVHIWQAVINWECLV  259 (360)
Q Consensus       183 V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d-~~i~vwd~~~~~~~~~  259 (360)
                      ...|++.+. +.++++-...+.|.++++........+.........|++.|.+..| ++-... +.|.++++...     
T Consensus       455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-----  529 (699)
T 1n7d_A          455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-----  529 (699)
T ss_dssp             CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-----
T ss_pred             cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-----
Confidence            456788754 4455555667889999987554433333333456788998865444 433222 56666554321     


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECCC
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVET  323 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~~  323 (360)
                                              ....+ ...-...+.|+|+|++..|+.+ +..+.|..+++..
T Consensus       530 ------------------------~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG  571 (699)
T 1n7d_A          530 ------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  571 (699)
T ss_dssp             ------------------------CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred             ------------------------CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence                                    01111 1112345679999876655444 4567899999864

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=93.23  E-value=2.4  Score=37.70  Aligned_cols=107  Identities=5%  Similarity=-0.153  Sum_probs=61.4

Q ss_pred             CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      -...+.++|.|+|++++ +..++.|.++| ..+.....                        .+............++|+
T Consensus        28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~------------------------~~~v~~~g~~g~~gia~~   81 (354)
T 3a9g_A           28 LEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVA------------------------SFDVANVGEAGLLGLALH   81 (354)
T ss_dssp             CSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEE------------------------ECCCCCSTTCSEEEEEEC
T ss_pred             CCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEee------------------------ccceeecCCCceeeEEeC
Confidence            34578999999998555 46668898886 33321100                        000111223467899999


Q ss_pred             CC---CCEEEEEEC----C----CcEEEEECCCC-------eEE-EEEec-CCCceEEEEEcCCCCEEEcccc
Q psy11015        302 SD---GEQVITASW----D----RVANLFDVETG-------TIL-QSLTE-PGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       302 p~---g~~l~tgs~----d----g~i~iwd~~~~-------~~~-~~l~~-h~~~v~~~~~~~~g~~las~~~  354 (360)
                      |+   +..|+.+..    +    ..|..|+....       +.+ ..+.. .......++|.|+|.+.++..+
T Consensus        82 pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~  154 (354)
T 3a9g_A           82 PEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD  154 (354)
T ss_dssp             TTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred             CCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence            97   555544432    2    56777776543       111 12221 1123467999999997776543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=93.11  E-value=6.5  Score=37.85  Aligned_cols=136  Identities=9%  Similarity=-0.034  Sum_probs=80.7

Q ss_pred             CCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015        181 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       181 ~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      ..+.+|+|++.+. ++++-...+.|+.+++........+...-..+..+++.+. ++++++-+..+.|.+.++....   
T Consensus       349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~---  425 (619)
T 3s94_A          349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM---  425 (619)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---
T ss_pred             CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe---
Confidence            3467899998555 4445556788998998754433344433456778999864 4566666677889888876431   


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEE-ecCC
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSL-TEPG  334 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l-~~h~  334 (360)
                                                ...+. ..-....++++.|...+|+-..+  .+.|...++. |.....+ ...-
T Consensus       426 --------------------------~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~l  478 (619)
T 3s94_A          426 --------------------------RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD-GSDRVVLVNTSL  478 (619)
T ss_dssp             --------------------------CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSC
T ss_pred             --------------------------EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC-CCccEEEEeCCC
Confidence                                      11221 22345788899886555544443  2456655654 3222222 2223


Q ss_pred             CceEEEEEcCCC
Q psy11015        335 EAIRAAAGRTGG  346 (360)
Q Consensus       335 ~~v~~~~~~~~g  346 (360)
                      ...+.+++++.+
T Consensus       479 ~~P~GlalD~~~  490 (619)
T 3s94_A          479 GWPNGLALDYDE  490 (619)
T ss_dssp             SCEEEEEEETTT
T ss_pred             CCCeeeEEcccC
Confidence            456778887643

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=93.04  E-value=3.6  Score=35.22  Aligned_cols=62  Identities=5%  Similarity=0.029  Sum_probs=35.8

Q ss_pred             CCCEEEEEeCC----CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEEcccC
Q psy11015        191 GQPVLGSASAD----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~D----g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd~~~~  254 (360)
                      ++.+++.|+.+    ..+.+||..+..-...  +.........+.+  ++.+++.|+.+      ..+.+||..++
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~  128 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE  128 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence            45577777755    5688899887753222  2211111122222  66677777755      45788888765

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=92.36  E-value=2.9  Score=38.57  Aligned_cols=107  Identities=8%  Similarity=-0.004  Sum_probs=60.8

Q ss_pred             CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee------CCCCcE
Q psy11015        222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL------GHSNVV  295 (360)
Q Consensus       222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v  295 (360)
                      -...+.|+|.|+|+++++-...+.|.+++...+....                          +..+.      ......
T Consensus        26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~--------------------------~~~~~~~~~~~~g~~Gl   79 (454)
T 1cru_A           26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKT--------------------------VFQVPEIVNDADGQNGL   79 (454)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE--------------------------EEECTTCCCCTTSSCSE
T ss_pred             CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeE--------------------------EecCCccccccCCCCce
Confidence            3457899999999977765444568877654332211                          11111      124567


Q ss_pred             EEEEEcCC---CCEEEEEEC-------------CCcEEEEECCCC--e-----EEE-EEec-CCCceEEEEEcCCCCEEE
Q psy11015        296 IAADWLSD---GEQVITASW-------------DRVANLFDVETG--T-----ILQ-SLTE-PGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       296 ~~i~~sp~---g~~l~tgs~-------------dg~i~iwd~~~~--~-----~~~-~l~~-h~~~v~~~~~~~~g~~la  350 (360)
                      ..++|+|+   +.+|+....             ...|.-|+...+  .     .+. .+.. ..+....++|.|+|.+.+
T Consensus        80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv  159 (454)
T 1cru_A           80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYY  159 (454)
T ss_dssp             EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEE
T ss_pred             eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEE
Confidence            89999995   555544432             124444544321  1     111 1221 123578899999998777


Q ss_pred             cccc
Q psy11015        351 SPLL  354 (360)
Q Consensus       351 s~~~  354 (360)
                      +..+
T Consensus       160 ~~Gd  163 (454)
T 1cru_A          160 TIGD  163 (454)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            6544

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=92.31  E-value=3.2  Score=35.80  Aligned_cols=108  Identities=6%  Similarity=-0.026  Sum_probs=55.6

Q ss_pred             CCCEEEEEeCC--------CcEEEEECCCCeEEE--EEeCCCcCeEEEEEeeCCCEEEEEeC-C-----CcEEEEEcccC
Q psy11015        191 GQPVLGSASAD--------RTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASG-D-----KSVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~D--------g~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~~~~l~s~s~-d-----~~i~vwd~~~~  254 (360)
                      ++.+++.|+.+        ..+.+||..+.+-..  .+.........+.  -++.+++.|+. +     ..+.+||..++
T Consensus        98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~  175 (315)
T 4asc_A           98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF  175 (315)
T ss_dssp             TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred             CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence            45566666642        458889988764221  1211111111222  36666777765 2     35788887765


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC-----cEEEEECCCCeEEE
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-----VANLFDVETGTILQ  328 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg-----~i~iwd~~~~~~~~  328 (360)
                      .-..                          +..+........++.+  +++.++.|+.++     .+.+||..+.+...
T Consensus       176 ~W~~--------------------------~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~  226 (315)
T 4asc_A          176 EWKE--------------------------LAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAP  226 (315)
T ss_dssp             EEEE--------------------------CCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred             eEEE--------------------------CCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence            2211                          1111100111112222  667777777654     48899998876543

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=92.18  E-value=3.6  Score=35.24  Aligned_cols=89  Identities=13%  Similarity=0.103  Sum_probs=44.5

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC------CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeC
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD------RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPN  233 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D------g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~  233 (360)
                      .|+........+..+......-.++.+  ++.+++.|+.+      ..+.+||..+..-...  +.........+.+  +
T Consensus        74 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~  149 (306)
T 3ii7_A           74 CYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--N  149 (306)
T ss_dssp             EEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T
T ss_pred             EEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--C
Confidence            344444444444444332222223333  45677777765      4588999887653222  1111111122222  6


Q ss_pred             CCEEEEEeC---------CCcEEEEEcccC
Q psy11015        234 KDLVLSASG---------DKSVHIWQAVIN  254 (360)
Q Consensus       234 ~~~l~s~s~---------d~~i~vwd~~~~  254 (360)
                      +.+++.|+.         -..+.+||+.++
T Consensus       150 ~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~  179 (306)
T 3ii7_A          150 GLIYVCGGSLGNNVSGRVLNSCEVYDPATE  179 (306)
T ss_dssp             TEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred             CEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence            666666653         244778888765

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=92.10  E-value=5  Score=34.15  Aligned_cols=89  Identities=12%  Similarity=0.165  Sum_probs=45.6

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCC
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNK  234 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D-----g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~  234 (360)
                      .++........+..+......-.++.+  ++.+++.|+.+     ..+.+||+.+..-...  +.........+.+  ++
T Consensus       132 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~  207 (301)
T 2vpj_A          132 RYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--ND  207 (301)
T ss_dssp             EEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT
T ss_pred             EEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CC
Confidence            344444444444443322222222233  46677777765     4588899887643222  1111111122222  66


Q ss_pred             CEEEEEeCC-----CcEEEEEcccC
Q psy11015        235 DLVLSASGD-----KSVHIWQAVIN  254 (360)
Q Consensus       235 ~~l~s~s~d-----~~i~vwd~~~~  254 (360)
                      .+++.|+.+     ..+.+||+.++
T Consensus       208 ~i~v~GG~~~~~~~~~v~~yd~~~~  232 (301)
T 2vpj_A          208 HIYVVGGFDGTAHLSSVEAYNIRTD  232 (301)
T ss_dssp             EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             EEEEEeCCCCCcccceEEEEeCCCC
Confidence            677777654     45888888765

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=91.86  E-value=0.45  Score=42.14  Aligned_cols=116  Identities=13%  Similarity=0.157  Sum_probs=71.9

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEEeCC-CcCeEEEEEe--eCCCEEEEE--eCCCcEEEEEcccCeeEeeeCCCCCCC
Q psy11015        193 PVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFL--PNKDLVLSA--SGDKSVHIWQAVINWECLVSNNDNDSD  267 (360)
Q Consensus       193 ~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h-~~~v~~i~~~--p~~~~l~s~--s~d~~i~vwd~~~~~~~~~~~~~~~~~  267 (360)
                      ..++.++.||.|.-.|..+|+.+..+... ..++....-.  +.+..++.+  +.||.+..++..+|......       
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~-------   83 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL-------   83 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE-------
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee-------
Confidence            37899999999999999999999998753 1222221110  112233333  58999999998777333211       


Q ss_pred             CCCCCCCCCCccccccceeEeeCCCCcEEE---EEE-----cCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        268 LDESKEPDESSITLRTPVKELLGHSNVVIA---ADW-----LSDGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~---i~~-----sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                                  .    +..+. ...++..   ...     ...+..+++|+.+|.+.-.|+.+|+.+..+..
T Consensus        84 ------------~----~~~lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~  139 (339)
T 2be1_A           84 ------------S----IRQLV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP  139 (339)
T ss_dssp             ------------E----HHHHH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred             ------------c----cccce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence                        0    00010 1112211   000     01456889999999999999999999988864

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=91.80  E-value=9.7  Score=36.73  Aligned_cols=133  Identities=12%  Similarity=-0.006  Sum_probs=81.1

Q ss_pred             CCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEE-eCCCcCeEEEEEee-CCCEEEEEeCCC--cEEEEEcccCe
Q psy11015        181 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLP-NKDLVLSASGDK--SVHIWQAVINW  255 (360)
Q Consensus       181 ~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~-~~h~~~v~~i~~~p-~~~~l~s~s~d~--~i~vwd~~~~~  255 (360)
                      ..+..|++...+. +..+-+..+.|.+.++. |+....+ .......++|+++| .|.++++-....  .|...++... 
T Consensus       389 ~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~-  466 (628)
T 4a0p_A          389 IQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT-  466 (628)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC-
T ss_pred             CCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC-
Confidence            4678999998755 55566778899999986 4444333 34456789999999 566666644333  3444443311 


Q ss_pred             eEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECCCCeEEEEEe-c
Q psy11015        256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQSLT-E  332 (360)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~~~~~~~~l~-~  332 (360)
                                                  ....+ ...-...+.+++.+.+..|+.+.. .+.|...++. |.....+. .
T Consensus       467 ----------------------------~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~d-G~~r~~~~~~  517 (628)
T 4a0p_A          467 ----------------------------EREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLS-GANRIVLEDS  517 (628)
T ss_dssp             ----------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECS
T ss_pred             ----------------------------CcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCC-CCceEEEEcC
Confidence                                        11112 222345788999988777776654 5778888875 33333443 2


Q ss_pred             CCCceEEEEEcC
Q psy11015        333 PGEAIRAAAGRT  344 (360)
Q Consensus       333 h~~~v~~~~~~~  344 (360)
                      .-....+++...
T Consensus       518 ~~~~P~glav~~  529 (628)
T 4a0p_A          518 NILQPVGLTVFE  529 (628)
T ss_dssp             SCSCEEEEEEET
T ss_pred             CCCCcEEEEEEC
Confidence            233456676654

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=91.57  E-value=5.6  Score=33.92  Aligned_cols=62  Identities=16%  Similarity=0.136  Sum_probs=34.1

Q ss_pred             CCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCCC-----cEEEEEcccC
Q psy11015        191 GQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~D-----g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d~-----~i~vwd~~~~  254 (360)
                      ++.+++.|+.+     ..+.+||..+.+-...  +.........+.+  ++.+++.|+.++     .+.+||+.++
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~  134 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSN  134 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTT
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCC
Confidence            45577777755     3588899887643221  2111111122222  667777777553     4667777655

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=91.53  E-value=3.7  Score=35.29  Aligned_cols=108  Identities=13%  Similarity=0.053  Sum_probs=55.7

Q ss_pred             CCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCC-----CcEEEEEcccCeeEe
Q psy11015        191 GQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVINWECL  258 (360)
Q Consensus       191 ~~~~l~sgs~D-----g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d-----~~i~vwd~~~~~~~~  258 (360)
                      ++.+++.|+.+     ..+.+||+.+.+-...  +.........+.+  ++.+++.|+.+     ..+.+||+.++.-..
T Consensus       121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~  198 (308)
T 1zgk_A          121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM  198 (308)
T ss_dssp             TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence            45566666644     3578889887642221  1111111122222  66667777654     357788876652221


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-----CcEEEEECCCCeEEE
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGTILQ  328 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-----g~i~iwd~~~~~~~~  328 (360)
                                                +..+........++.+  ++..++.|+.+     ..+.+||+.+.+...
T Consensus       199 --------------------------~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~  245 (308)
T 1zgk_A          199 --------------------------ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF  245 (308)
T ss_dssp             --------------------------CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             --------------------------CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence                                      1111100111122223  56667777664     458999998876543

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=90.33  E-value=8  Score=33.18  Aligned_cols=62  Identities=6%  Similarity=0.041  Sum_probs=34.5

Q ss_pred             CCCEEEEEeC-C-----CcEEEEECCCCeEEE--EEeCCCcCeEEEEEeeCCCEEEEEeCCC-----cEEEEEcccC
Q psy11015        191 GQPVLGSASA-D-----RTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~-D-----g~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~~~~l~s~s~d~-----~i~vwd~~~~  254 (360)
                      ++.+++.|+. +     ..+.+||+.+..-..  .+........++.+  ++.+++.|+.++     .+.+||+.++
T Consensus       148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~  222 (315)
T 4asc_A          148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN  222 (315)
T ss_dssp             TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC
Confidence            4556777766 2     468889988764222  11111111122222  677777777654     4777887765

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=90.30  E-value=6.4  Score=34.84  Aligned_cols=116  Identities=10%  Similarity=-0.033  Sum_probs=64.7

Q ss_pred             EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEE
Q psy11015        217 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI  296 (360)
Q Consensus       217 ~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~  296 (360)
                      .+-..-...+.|+|.|+|+++++--..|.|++++...+......                      .....+........
T Consensus        26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~----------------------~~~~v~~~g~~Gll   83 (347)
T 3das_A           26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELG----------------------EVPGVSPSGEGGLL   83 (347)
T ss_dssp             EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE----------------------ECTTCCCBTTBSEE
T ss_pred             EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeec----------------------ccCceeecCCCCce
Confidence            34334456789999999997777655899988875544211100                      00001122345688


Q ss_pred             EEEEcCC---CCEEEEE-E--CCCcEEEEECCC----------CeEE-EEEec-CCCceEEEEEcCCCCEEEcccc
Q psy11015        297 AADWLSD---GEQVITA-S--WDRVANLFDVET----------GTIL-QSLTE-PGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       297 ~i~~sp~---g~~l~tg-s--~dg~i~iwd~~~----------~~~~-~~l~~-h~~~v~~~~~~~~g~~las~~~  354 (360)
                      .++|+|+   +.+|+.. +  .++.|.-|....          .+.+ ..+.. ..+....++|.|+|.+.++..+
T Consensus        84 Gia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd  159 (347)
T 3das_A           84 GIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE  159 (347)
T ss_dssp             EEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred             eeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence            9999995   3445432 2  344455555443          1122 12321 1223467999999987776443

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=90.12  E-value=7.7  Score=33.35  Aligned_cols=62  Identities=13%  Similarity=0.021  Sum_probs=33.0

Q ss_pred             CCCEEEEEeCC-------CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEEcccC
Q psy11015        191 GQPVLGSASAD-------RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~D-------g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd~~~~  254 (360)
                      ++.+++.|+.+       ..+.+||..+.+-...  +......- +++. .++.+++.|+.+      ..+.+||+.++
T Consensus       109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~  185 (318)
T 2woz_A          109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKG  185 (318)
T ss_dssp             TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred             CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence            45667777754       2477888887643221  11111111 1122 366666666542      35788888765

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=89.82  E-value=12  Score=34.36  Aligned_cols=151  Identities=17%  Similarity=0.180  Sum_probs=93.2

Q ss_pred             eeeeeeeecCC----CCEEEEEECCCCCEEEEEe-------CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC---
Q psy11015        170 CYKIRSFSGHR----DGVWDVAVRPGQPVLGSAS-------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD---  235 (360)
Q Consensus       170 ~~~~~~l~~h~----~~V~~l~~~~~~~~l~sgs-------~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~---  235 (360)
                      ..+++.|.-|.    ..|.....+++.++++..|       -.|.+.+|..+.+ .-+.+.||.+....+..  +|+   
T Consensus       136 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~--~g~~~~  212 (494)
T 1bpo_A          136 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKM--EGNAEE  212 (494)
T ss_dssp             CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEEC--TTCSSE
T ss_pred             CCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEec--CCCCCC
Confidence            34555565553    3466777888888665443       2467888998754 35677888766554444  332   


Q ss_pred             --EEEEEeCC---CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccc-ceeEee---CCCCcEEEEEEcCCCCE
Q psy11015        236 --LVLSASGD---KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRT-PVKELL---GHSNVVIAADWLSDGEQ  306 (360)
Q Consensus       236 --~l~s~s~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~h~~~v~~i~~sp~g~~  306 (360)
                        +++-+...   ++++|-++....           ..        . ....+ .+..+.   .-.+-..++..++....
T Consensus       213 ~~lf~fa~r~~~g~kLhi~Ei~~~~-----------~~--------~-~~f~kk~vdv~fppe~~~DFPvamqvs~kygv  272 (494)
T 1bpo_A          213 STLFCFAVRGQAGGKLHIIEVGTPP-----------TG--------N-QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV  272 (494)
T ss_dssp             EEEEEEEECSTTCCEEEEEECSCCC-----------TT--------C-CCCCCEEEECCCCTTSTTCCEEEEEEETTTTE
T ss_pred             ceEEEEEEecCCCcEEEEEEcCCCc-----------cC--------C-CCccceeeeeeCCcccccCceeEEEecccCCE
Confidence              34444332   678888874320           00        0 00000 111111   12345668889998889


Q ss_pred             EEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEc
Q psy11015        307 VITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR  343 (360)
Q Consensus       307 l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~  343 (360)
                      ++.-+.-|.+++||+.+|.++..-+-...+|...+.+
T Consensus       273 iyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~  309 (494)
T 1bpo_A          273 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH  309 (494)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE
T ss_pred             EEEEecCceEEEEecccceeeeeecccCCceEEeccc
Confidence            9999999999999999999998777666666655543

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=89.56  E-value=22  Score=37.06  Aligned_cols=112  Identities=16%  Similarity=0.109  Sum_probs=67.9

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      ..++|++++--. | +|+.|- ..+|++|++...+.+. ....+ ..|..+.....+++++.|..-..+.++..+...  
T Consensus       884 v~g~v~al~~~~-g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~--  957 (1158)
T 3ei3_A          884 VKGAVYSMVEFN-G-KLLASI-NSTVRLYEWTTEKELRTECNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPME--  957 (1158)
T ss_dssp             ESSCEEEEEEET-T-EEEEEE-TTEEEEEEECTTSCEEEEEEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTT--
T ss_pred             cCCcCEEEeeeC-C-EEEEEc-CCEEEEEECCCCceEEEEeecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCC--
Confidence            468899987332 4 444333 4789999997654333 11112 123333333357889999888777776543221  


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVE  322 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~  322 (360)
                                               ..+..+.  -+...++++.+-.+ ..++.+..+|.+.+....
T Consensus       958 -------------------------~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~  998 (1158)
T 3ei3_A          958 -------------------------GNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKD  998 (1158)
T ss_dssp             -------------------------TEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEEC
T ss_pred             -------------------------CeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecC
Confidence                                     0122221  24567888888744 578889999999988654

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=89.26  E-value=3.8  Score=36.32  Aligned_cols=110  Identities=9%  Similarity=-0.022  Sum_probs=58.6

Q ss_pred             cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC
Q psy11015        223 GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  302 (360)
Q Consensus       223 ~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp  302 (360)
                      ...+.|+|.|+|+.++.+...+.|++++.. +.....                     .................++|+|
T Consensus        18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~---------------------~~~~~~v~~~g~~g~~gia~~p   75 (353)
T 2g8s_A           18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAP---------------------LSGVPDVWAHGQGGLLDVVLAP   75 (353)
T ss_dssp             SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCC---------------------CBSCCCCCCSTTCSEEEEEECT
T ss_pred             CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeE---------------------ecCCcccccCCCCCceeEEECC
Confidence            356899999999834445567889888743 211000                     0000001112234568899999


Q ss_pred             C---CCEEEEEE-C-------CCcEEEEECCCC--e--EEEEE-ec------CCCceEEEEEcCCCCEEEcccc
Q psy11015        303 D---GEQVITAS-W-------DRVANLFDVETG--T--ILQSL-TE------PGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       303 ~---g~~l~tgs-~-------dg~i~iwd~~~~--~--~~~~l-~~------h~~~v~~~~~~~~g~~las~~~  354 (360)
                      +   +.+|+... .       ...|..|+...+  .  ....+ ..      .......++|.|+|.+.++..+
T Consensus        76 df~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd  149 (353)
T 2g8s_A           76 DFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE  149 (353)
T ss_dssp             THHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred             CCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence            6   45554432 2       124555655432  1  11221 11      1122457999999987776544

>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*

Probab=89.04  E-value=0.72  Score=24.86  Aligned_cols=28  Identities=21%  Similarity=0.357  Sum_probs=24.7

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      +|+|.+.+.|..+|..|+.++..|.+.+
T Consensus         4 nQLE~kVEeLl~~n~~Le~eV~rLk~ll   31 (34)
T 2oxj_A            4 XQLEXKVXELLXKNXHLEXEVXRLKXLV   31 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            6889999999999999999998888765

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=88.94  E-value=3  Score=39.46  Aligned_cols=115  Identities=11%  Similarity=-0.021  Sum_probs=69.9

Q ss_pred             cCeEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccc-ceeEeeCCCCcEEEEEE
Q psy11015        223 GSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRT-PVKELLGHSNVVIAADW  300 (360)
Q Consensus       223 ~~v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~i~~  300 (360)
                      .....+.++|||++++.++ .+.++.|+|+.+-.....-.                ...... ...... -.-.....+|
T Consensus       323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k----------------~~~~~~~~~ae~e-~GlGPlHt~F  385 (638)
T 3sbq_A          323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK----------------LADPRDVIVGEPE-LGLGPLHTTF  385 (638)
T ss_dssp             SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC----------------CSCGGGGEEECCB-CCSCEEEEEE
T ss_pred             CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc----------------ccCcccceEeecc-CCCcccEEEE
Confidence            3456788999999876654 58899999987431110000                000001 111222 2345678899


Q ss_pred             cCCCCEEEEEECCCcEEEEECCCC----------eEEEEEecCCCceEEEE-----EcCCCCEEEcccc
Q psy11015        301 LSDGEQVITASWDRVANLFDVETG----------TILQSLTEPGEAIRAAA-----GRTGGPIRASPLL  354 (360)
Q Consensus       301 sp~g~~l~tgs~dg~i~iwd~~~~----------~~~~~l~~h~~~v~~~~-----~~~~g~~las~~~  354 (360)
                      .++|.-..|--.|..|.-|++...          ..+..+..|-++-...+     -.++|+||++...
T Consensus       386 d~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK  454 (638)
T 3sbq_A          386 DGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK  454 (638)
T ss_dssp             CSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred             CCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence            999944445557999999998643          45666776655433322     2678999887653

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=87.39  E-value=13  Score=31.96  Aligned_cols=60  Identities=0%  Similarity=-0.036  Sum_probs=34.2

Q ss_pred             EECCCCCEEEEEeCC--------------CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe--CCCcEEEEE
Q psy11015        187 AVRPGQPVLGSASAD--------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS--GDKSVHIWQ  250 (360)
Q Consensus       187 ~~~~~~~~l~sgs~D--------------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s--~d~~i~vwd  250 (360)
                      -+++++..|+-+...              ..|+..++..+....... .  .  +..|+++++.|+-..  .++.-.||.
T Consensus        59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~-~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~  133 (302)
T 3s25_A           59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP-D--P--CIYASLIGNYIYYLHYDTQTATSLYR  133 (302)
T ss_dssp             EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC-S--C--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred             eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec-C--C--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence            357778876666543              357777777665333222 1  1  236788888877655  344444444


Q ss_pred             c
Q psy11015        251 A  251 (360)
Q Consensus       251 ~  251 (360)
                      +
T Consensus       134 ~  134 (302)
T 3s25_A          134 I  134 (302)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=87.23  E-value=18  Score=33.33  Aligned_cols=54  Identities=15%  Similarity=0.102  Sum_probs=36.0

Q ss_pred             CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC---eEEEEEe-----C----CCcCeEEEEEeeC
Q psy11015        180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG---KCVLQYS-----G----HSGSVNSVRFLPN  233 (360)
Q Consensus       180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~---~~~~~~~-----~----h~~~v~~i~~~p~  233 (360)
                      -..-+.|+|.|++. .|+.+...|.|++++....   ..+..+.     +    ..+....|+|+|+
T Consensus        13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~   79 (463)
T 2wg3_C           13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN   79 (463)
T ss_dssp             ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred             CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence            34678999999986 4555677899999975422   1222221     1    1356889999996

>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A

Probab=86.94  E-value=1.1  Score=24.01  Aligned_cols=28  Identities=29%  Similarity=0.423  Sum_probs=24.3

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      .|+|.+.+.|..+|..|+.++..|.+.+
T Consensus         3 ~QLE~kVEeLl~~n~~Le~EV~RLk~Ll   30 (33)
T 3m48_A            3 AQLEAKVEELLSKNWNLENEVARLKKLV   30 (33)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            4788999999999999999998887765

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=86.72  E-value=29  Score=35.23  Aligned_cols=39  Identities=15%  Similarity=0.112  Sum_probs=32.7

Q ss_pred             CeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015        224 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNN  262 (360)
Q Consensus       224 ~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~  262 (360)
                      .+.+++..++..++++-+.|+++|+|++.++........
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL  275 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL  275 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence            467778888888999999999999999999987766443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=86.50  E-value=14  Score=31.43  Aligned_cols=62  Identities=6%  Similarity=0.096  Sum_probs=35.1

Q ss_pred             CCCEEEEEeCC-----CcEEEEECCCCeEEE--EEeCCCcCeEEEEEeeCCCEEEEEeCC-----CcEEEEEcccC
Q psy11015        191 GQPVLGSASAD-----RTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~D-----g~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~~~~l~s~s~d-----~~i~vwd~~~~  254 (360)
                      ++.+++.|+.+     ..+.+||+.+..-..  .+.........+.+  ++.+++.|+.+     ..+.+||+.++
T Consensus       168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~  241 (308)
T 1zgk_A          168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE  241 (308)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence            45677777665     458889987764221  11111111222223  66677777654     45888888765

>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*

Probab=85.85  E-value=1.4  Score=23.53  Aligned_cols=28  Identities=11%  Similarity=0.223  Sum_probs=23.9

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      +|+|.+.+.|..+|..|+.++..|.+.+
T Consensus         3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL   30 (33)
T 3c3g_A            3 KXIEXKLXEIXSKXYHXENXLARIKXLL   30 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            5788999999999999999988887654

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=85.56  E-value=9.1  Score=33.46  Aligned_cols=49  Identities=8%  Similarity=-0.086  Sum_probs=24.0

Q ss_pred             CcEEEEECCCCeE--EEEEeCCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEEc
Q psy11015        202 RTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQA  251 (360)
Q Consensus       202 g~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd~  251 (360)
                      ..+.+||..+.+-  +..+..-...-.+++.. ++.+++.|+.+      ..+.+||+
T Consensus       168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~  224 (357)
T 2uvk_A          168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF  224 (357)
T ss_dssp             CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred             ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence            4788999887643  32222111110222222 56666666532      34566665

>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1

Probab=84.71  E-value=1.7  Score=23.34  Aligned_cols=28  Identities=18%  Similarity=0.258  Sum_probs=23.9

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      +|+|.+.+.|..+|..|+.++..|...+
T Consensus         4 nQLEdKVEeLl~~~~~Le~EV~RLk~ll   31 (34)
T 3c3f_A            4 XQIEXKLEXILSXLYHXENEXARIXKLL   31 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            6788899999999999999988887654

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=84.20  E-value=9.6  Score=40.40  Aligned_cols=151  Identities=17%  Similarity=0.192  Sum_probs=82.6

Q ss_pred             eeeeeeecC----CCCEEEEEECCCCCEEEEEe-------CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe--eCCC-E
Q psy11015        171 YKIRSFSGH----RDGVWDVAVRPGQPVLGSAS-------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL--PNKD-L  236 (360)
Q Consensus       171 ~~~~~l~~h----~~~V~~l~~~~~~~~l~sgs-------~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~--p~~~-~  236 (360)
                      .+++.|.-|    ...|.....+++.++++..|       -.|.+.+|.++.+ ..+.+.||.+....+...  +... +
T Consensus       137 ~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l  215 (1630)
T 1xi4_A          137 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTL  215 (1630)
T ss_pred             ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceE
Confidence            344444444    34466667788888655433       3477888887644 234566776655444442  1112 2


Q ss_pred             EEEEeC---CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee---CCCCcEEEEEEcCCCCEEEEE
Q psy11015        237 VLSASG---DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITA  310 (360)
Q Consensus       237 l~s~s~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~i~~sp~g~~l~tg  310 (360)
                      ++.+..   .++++|-++.....-            .+      ... ...+..+.   .-..-..++..++....+..-
T Consensus       216 ~~f~~~~~~g~kLhi~Ei~~~~~~------------~~------~f~-kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~i  276 (1630)
T 1xi4_A          216 FCFAVRGQAGGKLHIIEVGTPPTG------------NQ------PFP-KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI  276 (1630)
T ss_pred             EEEEEecCCCceEEEEecCCCccC------------CC------CCc-cccccccCCcccccCcceEEEeccccCEEEEE
Confidence            322222   267888877432000            00      000 00011111   123345577888888888888


Q ss_pred             ECCCcEEEEECCCCeEEEEEecCCCceEEEE
Q psy11015        311 SWDRVANLFDVETGTILQSLTEPGEAIRAAA  341 (360)
Q Consensus       311 s~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~  341 (360)
                      +.-|.+++||+.||.++..-+....+|...+
T Consensus       277 tk~G~~~~~d~~t~~~i~~~ris~~~iF~~~  307 (1630)
T 1xi4_A          277 TKYGYIHLYDLETGTCIYMNRISGETIFVTA  307 (1630)
T ss_pred             ecCceEEEEecccchhhhhccccCCceEEec
Confidence            8999999999999988765544444444333

>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*

Probab=84.11  E-value=2.1  Score=23.13  Aligned_cols=28  Identities=18%  Similarity=0.242  Sum_probs=24.0

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      .|+|.+.+.|..+|..|+.++..|.+.+
T Consensus         4 ~QLEdKVEeLl~~n~~Le~EV~RLk~LL   31 (34)
T 1uo4_A            4 KQIEDKGEEILSKLYHIENELARIKKLL   31 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            5788999999999999999988887665

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=84.10  E-value=4.9  Score=40.92  Aligned_cols=38  Identities=18%  Similarity=0.302  Sum_probs=33.5

Q ss_pred             cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        294 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       294 ~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      .+.+++..++..+++|-+.|+++|+|++.+++++.+..
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            56777888888999999999999999999999988753

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=83.79  E-value=3.1  Score=25.77  Aligned_cols=37  Identities=16%  Similarity=0.218  Sum_probs=31.9

Q ss_pred             hHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         69 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        69 ~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      -|.|...+...+|.++..|..+|..|..++..|.+..
T Consensus        16 SR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~   52 (55)
T 1dh3_A           16 SRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLY   52 (55)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3567778899999999999999999999998887654

>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...

Probab=83.72  E-value=2.1  Score=23.10  Aligned_cols=28  Identities=18%  Similarity=0.297  Sum_probs=24.1

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      +|+|.+.+.|..++..|+.++..|.+.+
T Consensus         4 nQLEdKvEeLl~~~~~L~~EV~RLk~lL   31 (34)
T 2bni_A            4 KQIEDKLEEILSKGHHICNELARIKKLL   31 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence            5788999999999999999988887665

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=82.83  E-value=14  Score=36.08  Aligned_cols=65  Identities=17%  Similarity=0.137  Sum_probs=37.6

Q ss_pred             CCCCEEEEEeCCC--cEEEEECCCCeEEEEE-----eCCCcCeEEEEEeeC-CCEEEEEeC--C-----CcEEEEEcccC
Q psy11015        190 PGQPVLGSASADR--TVRLWSTQTGKCVLQY-----SGHSGSVNSVRFLPN-KDLVLSASG--D-----KSVHIWQAVIN  254 (360)
Q Consensus       190 ~~~~~l~sgs~Dg--~v~iwd~~~~~~~~~~-----~~h~~~v~~i~~~p~-~~~l~s~s~--d-----~~i~vwd~~~~  254 (360)
                      .++.+++.||.++  .+.+||..+..-...-     ........++.+..+ +.+++.|+.  +     ..+.+||+.++
T Consensus       499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~  578 (695)
T 2zwa_A          499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE  578 (695)
T ss_dssp             TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred             cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence            3677888887765  6889999876532211     101111223455544 556666765  2     34778888765

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=82.78  E-value=22  Score=30.41  Aligned_cols=65  Identities=12%  Similarity=0.054  Sum_probs=33.5

Q ss_pred             ECCCCCEEEEEeC----CC-------cEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCC-------CcEE
Q psy11015        188 VRPGQPVLGSASA----DR-------TVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD-------KSVH  247 (360)
Q Consensus       188 ~~~~~~~l~sgs~----Dg-------~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d-------~~i~  247 (360)
                      ...++.+++.|+.    ++       .+.+||..+.+-...  +..-......+.+  ++.+++.|+.+       ..+.
T Consensus        53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~  130 (318)
T 2woz_A           53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL  130 (318)
T ss_dssp             ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred             EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence            3455667777873    12       177788877643221  1111111112222  66677777754       2366


Q ss_pred             EEEcccC
Q psy11015        248 IWQAVIN  254 (360)
Q Consensus       248 vwd~~~~  254 (360)
                      +||..++
T Consensus       131 ~yd~~~~  137 (318)
T 2woz_A          131 CYDPVAA  137 (318)
T ss_dssp             EEETTTT
T ss_pred             EEeCCCC
Confidence            7777655

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=82.74  E-value=30  Score=33.67  Aligned_cols=63  Identities=10%  Similarity=0.142  Sum_probs=36.2

Q ss_pred             CCCEEEEEeCCC------cEEEEECCCCeEEE--EEeCCCcCeEEEEEeeCCCEEEEEeCCC--cEEEEEcccC
Q psy11015        191 GQPVLGSASADR------TVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVIN  254 (360)
Q Consensus       191 ~~~~l~sgs~Dg------~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i~vwd~~~~  254 (360)
                      ++.+++.||.++      .+.+||..+..-..  .+..-... .+++...++.+++.|+.++  .+.+||..++
T Consensus       451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~  523 (695)
T 2zwa_A          451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEE  523 (695)
T ss_dssp             TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred             CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence            566777777543      47788888753222  11111111 1222223777888877654  6888988765

>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...

Probab=82.57  E-value=2.5  Score=22.65  Aligned_cols=28  Identities=14%  Similarity=0.052  Sum_probs=23.4

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      .|+|.+++.+..++..|..++..|.+.+
T Consensus         3 nQLEdKVEell~~~~~le~EV~Rl~~ll   30 (33)
T 2wq1_A            3 KQLEDKIEENTSKIYHNTNEIARNTKLV   30 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence            5788888999999999999888887654

>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A

Probab=81.36  E-value=2.5  Score=22.80  Aligned_cols=28  Identities=21%  Similarity=0.281  Sum_probs=23.6

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      .|+|.+.+.|..+|..|...+..|.+.+
T Consensus         4 nQLEdkVEeLl~~~~~Le~eV~RL~~ll   31 (34)
T 2hy6_A            4 KQLADAVEELASANYHLANAVARLAKAV   31 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence            5788889999999999999888887654

>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A

Probab=81.05  E-value=2.2  Score=23.30  Aligned_cols=29  Identities=24%  Similarity=0.281  Sum_probs=23.6

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhccc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKLD  106 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~~  106 (360)
                      .|+|.+.+.|..++..|..++..|...+.
T Consensus         4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll~   32 (36)
T 1kd8_A            4 KQLEAEVEEIESEVWHLENEVARLEKENA   32 (36)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence            57888888899999999988888876653

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=80.58  E-value=4.5  Score=42.15  Aligned_cols=38  Identities=18%  Similarity=0.302  Sum_probs=32.3

Q ss_pred             cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        294 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       294 ~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                      .+.+++..++..+++|-+.|+++|||++.+++++.+..
T Consensus       239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D  276 (1139)
T 4fhn_B          239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  276 (1139)
T ss_dssp             CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred             eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence            34556667788999999999999999999999998864

>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B

Probab=80.36  E-value=2.6  Score=23.04  Aligned_cols=29  Identities=24%  Similarity=0.260  Sum_probs=23.9

Q ss_pred             HHHHHHHHHhHHhhhhHHHHHHHHhhccc
Q psy11015         78 SQIEREFELLYLENLNLQDKIDMLMEKLD  106 (360)
Q Consensus        78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~~  106 (360)
                      .|+|.+.+.|..++..|+.++..|.+.+.
T Consensus         4 nQLE~KVEeLl~~~~~Le~eV~RLk~ll~   32 (36)
T 1kd8_B            4 KQLKAKVEELKSKLWHLKNKVARLKKKNA   32 (36)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence            57888888999999999998888877653

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=80.18  E-value=4.3  Score=25.89  Aligned_cols=37  Identities=19%  Similarity=0.266  Sum_probs=31.5

Q ss_pred             hHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015         69 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL  105 (360)
Q Consensus        69 ~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~  105 (360)
                      .|.|.......++.+++.|..+|..|..+++.|.+.+
T Consensus        24 sR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l   60 (63)
T 2dgc_A           24 SRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLV   60 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567778888999999999999999999999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	360
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-19
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-18
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-17
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-05
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-17
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-06
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	9e-05
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-04
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-16
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.002
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	6e-15
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-14
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-13
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	9e-08
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-14
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.003
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-13
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-11
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.002
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-13
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-11
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	8e-08
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.001
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.004
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-12
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-10
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-05
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	0.002
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	0.003
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	6e-12
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	4e-09
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	8e-09
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-06
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	0.002
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	6e-12
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-09
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.002
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.002
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-12
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-11
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	3e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-11
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-10
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-07
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	0.001
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-10
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	1e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	8e-05
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	8e-10
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-08
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	5e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-09
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	6e-08
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	8e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-07
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-04
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	5e-07
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	0.003
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	7e-06
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.004
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	1e-05
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-05
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	1e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	2e-04
d2p4oa1	302	b.68.6.3 (A:4-305) Hypothetical protein All0351 ho	0.001

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 85.9 bits (211), Expect = 1e-19
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 28/151 (18%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
                S      G          P L S S D+T+++W   TG C++   GH   V  V 
Sbjct: 195 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 254

Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL 289
           F      +LS + DK++ +W                 D    +            +K L 
Sbjct: 255 FHSGGKFILSCADDKTLRVW-----------------DYKNKR-----------CMKTLN 286

Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFD 320
            H + V + D+      V+T S D+   +++
Sbjct: 287 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.7 bits (200), Expect = 4e-18
 Identities = 42/183 (22%), Positives = 66/183 (36%), Gaps = 14/183 (7%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
             + SGHR  V  V   P   V+ SAS D T+++W  +TG       GH+ SV  + F  
Sbjct: 10  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 69

Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITL----------- 281
           +  L+ S S D ++ +W           +  + +    S  P+   I             
Sbjct: 70  SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129

Query: 282 ---RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
                 VK   GH   V       DG  + + S D+   ++ V T      L E    + 
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189

Query: 339 AAA 341
             +
Sbjct: 190 CIS 192

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.0 bits (193), Expect = 3e-17
 Identities = 33/183 (18%), Positives = 69/183 (37%), Gaps = 8/183 (4%)

Query: 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 228
           + Y +++F+GHR+ V  V       ++ S S D+TVR+W   T +C  +   H   V  +
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 191

Query: 229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL 288
            + P       +    S            L  + D    + +              +  L
Sbjct: 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST--------GMCLMTL 243

Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPI 348
           +GH N V    + S G+ +++ + D+   ++D +    +++L      + +       P 
Sbjct: 244 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 303

Query: 349 RAS 351
             +
Sbjct: 304 VVT 306

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.1 bits (149), Expect = 2e-11
 Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 8/182 (4%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
              IR+  GH   V  V++ P    + SAS D+T+++W  QTG CV  ++GH   V  VR
Sbjct: 91  FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 150

Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL 289
              +  L+ S S D++V +W         V+  +  ++L E +   E            +
Sbjct: 151 PNQDGTLIASCSNDQTVRVWV--------VATKECKAELREHRHVVECISWAPESSYSSI 202

Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIR 349
             +           G  +++ S D+   ++DV TG  L +L      +R     +GG   
Sbjct: 203 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFI 262

Query: 350 AS 351
            S
Sbjct: 263 LS 264

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.0 bits (110), Expect = 1e-06
 Identities = 12/56 (21%), Positives = 25/56 (44%)

Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
               L GH + V    +      +++AS D    ++D ETG   ++L    ++++ 
Sbjct: 9   EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (102), Expect = 1e-05
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW 207
              +   +++ + H   V  +      P + + S D+TV++W
Sbjct: 275 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 80.9 bits (198), Expect = 1e-17
 Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 16/167 (9%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
             +  +F+GH   V  +++ P   +  S + D + +LW  + G C   ++GH   +N++ 
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233

Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDND----SDLDESKEP-------DESS 278
           F PN +   + S D +  ++    + E +  ++DN     + +  SK         D+ +
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293

Query: 279 ITL-----RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
             +           L GH N V       DG  V T SWD    +++
Sbjct: 294 CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.8 bits (138), Expect = 4e-10
 Identities = 32/185 (17%), Positives = 56/185 (30%), Gaps = 17/185 (9%)

Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
           R+  GH   ++ +       +L SAS D  + +W + T   V      S  V +  + P+
Sbjct: 49  RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108

Query: 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPD-----------------E 276
            + V     D    I+        +  + +                              
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCAL 168

Query: 277 SSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA 336
             I          GH+  V++     D    ++ + D  A L+DV  G   Q+ T     
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228

Query: 337 IRAAA 341
           I A  
Sbjct: 229 INAIC 233

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.9 bits (107), Expect = 3e-06
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 208
             L   +    +GH + V  + V      + + S D  +++W+
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.6 bits (96), Expect = 9e-05
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 271 SKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
           +       I +RT  + L GH   + A  W +D   +++AS D    ++D  T   + ++
Sbjct: 35  NNIDPVGRIQMRTR-RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93

Query: 331 TEPGEAIRAAA 341
                 +   A
Sbjct: 94  PLRSSWVMTCA 104

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.9 bits (89), Expect = 7e-04
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 213 KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 251
           +      GH   + ++ +  +  L++SAS D  + IW +
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDS 84

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (184), Expect = 6e-16
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 1/81 (1%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
                    H   V  +          S   D  +  W T  G  + Q    S SV S  
Sbjct: 255 KPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCD 313

Query: 230 FLPNKDLVLSASGDKSVHIWQ 250
              +   +++ SGDK   +++
Sbjct: 314 ISVDDKYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (133), Expect = 2e-09
 Identities = 11/85 (12%), Positives = 24/85 (28%), Gaps = 6/85 (7%)

Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-----VLQYSGHSGSVNSVRFLP 232
            H + V  V +      + +      V++W             L        + S + LP
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107

Query: 233 NKDLVLSASGDKSVHIWQAVINWEC 257
           +   ++      ++ IW        
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPR 132

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (129), Expect = 6e-09
 Identities = 20/152 (13%), Positives = 42/152 (27%), Gaps = 30/152 (19%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
             +          ++ +   P    L        V +          Q   H   V S++
Sbjct: 214 EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLK 272

Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL 289
           F       +S   D  ++ W+       +                               
Sbjct: 273 FAYCGKWFVSTGKDNLLNAWR-TPYGASIFQ----------------------------S 303

Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
             S+ V++ D   D + ++T S D+ A +++V
Sbjct: 304 KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 7/50 (14%), Positives = 18/50 (36%)

Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAA 340
           H + V++  +   G+  ++   D + N +    G  +    E    +   
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCD 313

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.9 bits (177), Expect = 6e-15
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 6/88 (6%)

Query: 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 228
           S     ++ GH+D V  VA       + S S DR V  W  ++G  +L   GH  SV SV
Sbjct: 297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 356

Query: 229 ------RFLPNKDLVLSASGDKSVHIWQ 250
                    P  ++  + SGD    IW+
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.0 bits (172), Expect = 3e-14
 Identities = 40/169 (23%), Positives = 59/169 (34%), Gaps = 46/169 (27%)

Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK------------CVLQYS 219
           +  S +GH+D V+ V        + S S DR+V+LW+ Q               C + Y 
Sbjct: 246 ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI 305

Query: 220 GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSI 279
           GH   V SV    N + +LS S D+ V  W                 D            
Sbjct: 306 GHKDFVLSVATTQNDEYILSGSKDRGVLFW-----------------DKKSGN------- 341

Query: 280 TLRTPVKELLGHSNVVIAADWLS------DGEQVITASWDRVANLFDVE 322
               P+  L GH N VI+    +      +     T S D  A ++  +
Sbjct: 342 ----PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.3 bits (165), Expect = 2e-13
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 23/185 (12%)

Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFL 231
                           + + S DR VR+W ++TG  V +        +GH  SV SV F 
Sbjct: 204 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT 263

Query: 232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH 291
            +   V+S S D+SV +W                   + + + D  +    T     +GH
Sbjct: 264 RDGQSVVSGSLDRSVKLWNLQ----------------NANNKSDSKTPNSGTCEVTYIGH 307

Query: 292 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS 351
            + V++     + E +++ S DR    +D ++G  L  L     ++ + A   G  +   
Sbjct: 308 KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE 367

Query: 352 PLLLA 356
             + A
Sbjct: 368 YNVFA 372

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.0 bits (120), Expect = 9e-08
 Identities = 14/126 (11%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 191 GQPVLGSASADRTVRLWSTQTGKC----VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV 246
             P       +    L++    +     + +   H+  V  V+F  + + + +   +K+ 
Sbjct: 27  SVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTT 85

Query: 247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ 306
            +++ V +   +   +D+ +   + +  + SS                + +  +  DG+ 
Sbjct: 86  QVYR-VSDGSLVARLSDDSAANKDPENLNTSS---------SPSSDLYIRSVCFSPDGKF 135

Query: 307 VITASW 312
           + T + 
Sbjct: 136 LATGAE 141

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.9 bits (169), Expect = 6e-14
 Identities = 12/83 (14%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNK 234
           S   + +   A    +  +     +  V ++     K V   +   H+G V  V + P+ 
Sbjct: 4   SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63

Query: 235 DLVLSASGDKSVHIWQAVINWEC 257
           + +++   D++ ++W        
Sbjct: 64  NRIVTCGTDRNAYVWTLKGRTWK 86

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.9 bits (117), Expect = 2e-07
 Identities = 30/234 (12%), Positives = 65/234 (27%), Gaps = 16/234 (6%)

Query: 107 RESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTS 166
            +  + +   +      ++      +      S     ++ +    +V+     + + + 
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 187

Query: 167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
           +     +   S     V  V        +   S D TV L        V   +  +  + 
Sbjct: 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 247

Query: 227 SVRFLPNKDLVLSASGDKSVHIWQAVINWECL---------VSNNDNDSDLDESKEPD-- 275
           +V F+    LV +      V         +            S+    +  +  +  D  
Sbjct: 248 AVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKK 307

Query: 276 -ESSITLRTPVKELLGHSNVVIAADWLSDGE----QVITASWDRVANLFDVETG 324
             S  +          H N V     LS G+    Q  T   D   +++DV + 
Sbjct: 308 ASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 361

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.1 bits (115), Expect = 3e-07
 Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 26/103 (25%)

Query: 218 YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDES 277
           +S     ++   +  ++  +     +  VHI+                 +   +K     
Sbjct: 3   HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY-----------------EKSGNK----- 40

Query: 278 SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
                  V EL  H+  V   DW  D  +++T   DR A ++ 
Sbjct: 41  ----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 79

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.9 bits (99), Expect = 4e-05
 Identities = 9/65 (13%), Positives = 19/65 (29%)

Query: 157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL 216
           +  V  ++ S     ++     H   V  V   P    + +   DR   +W+ +      
Sbjct: 28  NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 87

Query: 217 QYSGH 221
                
Sbjct: 88  TLVIL 92

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.8 bits (83), Expect = 0.003
 Identities = 8/49 (16%), Positives = 19/49 (38%), Gaps = 4/49 (8%)

Query: 173 IRSFSGHRDGVWDVAVRPGQP----VLGSASADRTVRLWSTQTGKCVLQ 217
               S H++ V  ++V  G         +   D  + +W  ++ +  L+
Sbjct: 318 AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALK 366

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.0 bits (164), Expect = 3e-13
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 2/86 (2%)

Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
           +  +  GH   V           + + + D+ +R++ +   K +LQ SGH G V ++++ 
Sbjct: 4   QRTTLRGHMTSVITCLQFEDN-YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA 62

Query: 232 PNKDLVLSASGDKSVHIWQAVINWEC 257
               LV S S D++V +W        
Sbjct: 63  HGGILV-SGSTDRTVRVWDIKKGCCT 87

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.8 bits (148), Expect = 3e-11
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSV 228
               R FS H   +  +        +  + ++    +++ ++GK V       +  + SV
Sbjct: 271 NDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSV 330

Query: 229 RFLPNKDLVLSASGDKSVHIW 249
            F     LV +   D    + 
Sbjct: 331 NFKGKT-LVAAVEKDGQSFLE 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.5 bits (103), Expect = 1e-05
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP 347
           L GH   VI      +   VIT + D++  ++D      L  L+     + A     GG 
Sbjct: 8   LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 66

Query: 348 I 348
           +
Sbjct: 67  L 67

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 26/183 (14%), Positives = 63/183 (34%), Gaps = 13/183 (7%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
            Y +    GH   V  V+      V GS   D T+ +W     KC+   SGH+  + S  
Sbjct: 151 PYFVGVLRGHMASVRTVSGHGNIVVSGSY--DNTLIVWDVAQMKCLYILSGHTDRIYSTI 208

Query: 230 FLPNKDLVLSASGDKSV----------HIWQAVINWECLVSNNDNDSDLDESKEPDESSI 279
           +   +   +SAS D ++                      +    +   +  + +      
Sbjct: 209 YDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGW 268

Query: 280 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTEPGEAIR 338
                 ++   H   + A       + ++ +  +   N++++ +G ++ + + +  + I 
Sbjct: 269 DANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIW 328

Query: 339 AAA 341
           +  
Sbjct: 329 SVN 331

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.6 bits (163), Expect = 3e-13
 Identities = 13/88 (14%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC---VLQYSGHSGSVNSVR 229
           ++     +D + D+ + P + +L   S D ++ ++          +LQ   +   +    
Sbjct: 4   VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63

Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWEC 257
           F+ N DL +     +   +   +I    
Sbjct: 64  FIDNTDLQIYVGTVQGEILKVDLIGSPS 91

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.2 bits (149), Expect = 2e-11
 Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 1/139 (0%)

Query: 114 KYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKI 173
              E + ++          K++   +  S            Q     SS + +       
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244

Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
              +     V  +   P    L +A +D  +  W+ QT K +  ++      + V+   +
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACS 303

Query: 234 KDLVLSASGDKSVHIWQAV 252
            +++  A+ D +     A+
Sbjct: 304 DNILCLATSDDTFKTNAAI 322

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.0 bits (120), Expect = 8e-08
 Identities = 11/101 (10%), Positives = 34/101 (33%), Gaps = 25/101 (24%)

Query: 213 KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESK 272
           + V         ++ ++ +P+K L+L  S D S+ ++                   D   
Sbjct: 2   QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVY-----------------KFDIQA 44

Query: 273 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD 313
           +           + + L + + ++  +++ + +  I     
Sbjct: 45  K--------NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV 77

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 4/41 (9%), Positives = 12/41 (29%)

Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
              + +     +     ++  SWD    ++  +       L
Sbjct: 9   APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL 49

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.4 bits (82), Expect = 0.004
 Identities = 14/145 (9%), Positives = 42/145 (28%), Gaps = 17/145 (11%)

Query: 200 ADRTVRLWSTQTGKCVLQYSGHSGS----VNSVRFLPNKDLVLSASGDKSVHIWQAVINW 255
            +  V+ +     +        SG      +       ++    +S D  V +       
Sbjct: 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE------ 221

Query: 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV 315
                    D   D+       +        +    +  V + ++    + + TA  D +
Sbjct: 222 -------FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI 274

Query: 316 ANLFDVETGTILQSLTEPGEAIRAA 340
            + ++++T   +++  +  E     
Sbjct: 275 ISCWNLQTRKKIKNFAKFNEDSVVK 299

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 65.3 bits (157), Expect = 1e-12
 Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-SVNSV 228
                    H   V+ +   P    + SASAD+T+++W+  T K        +      +
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQL 287

Query: 229 RFLPNKDLVLSASGDKSVHIW 249
             +  K  ++S S +  ++  
Sbjct: 288 GIIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 58.0 bits (138), Expect = 4e-10
 Identities = 11/78 (14%), Positives = 20/78 (25%), Gaps = 1/78 (1%)

Query: 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS 239
           R     +   P    +   +   +V      +      Y+ HS      +  P+     S
Sbjct: 17  RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCAS 75

Query: 240 ASGDKSVHIWQAVINWEC 257
                +V IW        
Sbjct: 76  GDVHGNVRIWDTTQTTHI 93

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.6 bits (98), Expect = 4e-05
 Identities = 10/87 (11%), Positives = 20/87 (22%), Gaps = 2/87 (2%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRF 230
              ++ H          P      S      VR+W T              SG V  + +
Sbjct: 51  TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW 110

Query: 231 LPNKDLVLSASGDKSVHIWQAVINWEC 257
                 + +    +       + +   
Sbjct: 111 DSESKRIAAVGEGRERFGHVFLFDTGT 137

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 29/117 (24%)

Query: 207 WSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDS 266
            +       L+   HSGSV  + + P+   + SAS DK++ IW                 
Sbjct: 223 KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW----------------- 265

Query: 267 DLDESKEPDESSITLRTPVKELLGHSNVVIAA-DWLSDGEQVITASWDRVANLFDVE 322
           ++   K             K +   + +       +   + +++ S +   N  + E
Sbjct: 266 NVATLK-----------VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.4 bits (82), Expect = 0.003
 Identities = 11/92 (11%), Positives = 20/92 (21%), Gaps = 29/92 (31%)

Query: 223 GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLR 282
           G+   +   P  D +   +G  SV+                               +   
Sbjct: 18  GTAVVLGNTPAGDKIQYCNGT-SVYTV----------------------------PVGSL 48

Query: 283 TPVKELLGHSNVVIAADWLSDGEQVITASWDR 314
           T  +    HS+    A     G    +     
Sbjct: 49  TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG 80

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (153), Expect = 6e-12
 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
            +   GH D V       G   + S S D T+++WS  TGKC+    GH+G V S +   
Sbjct: 9   PKVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD 67

Query: 233 NKDLVLSASGDKSVHIWQAVINWEC 257
           N  +  S      V   +       
Sbjct: 68  NIIISGSTDRTLKVWNAETGECIHT 92

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (130), Expect = 4e-09
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 11/89 (12%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV-----LQYSGHSGS 224
              ++  + H+  V  +       +  ++S D TV+LW  +TG+ +     L+  G  G 
Sbjct: 250 LQTLQGPNKHQSAVTCLQFNKNFVI--TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307

Query: 225 VNSVRFLPNKDLVLSASGDKS----VHIW 249
           V  +R    K +    S + +    + + 
Sbjct: 308 VWRIRASNTKLVCAVGSRNGTEETKLLVL 336

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (128), Expect = 8e-09
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 31/162 (19%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
              + +  GH + V+ +       V  S S D ++R+W  +TG C+   +GH    + + 
Sbjct: 167 ETCLHTLQGHTNRVYSLQFDGIHVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 224

Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL 289
                ++++S + D +V IW                                        
Sbjct: 225 L--KDNILVSGNADSTVKIWDIKTGQCLQTLQGP-------------------------- 256

Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
            + +         +   VIT+S D    L+D++TG  +++L 
Sbjct: 257 -NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 297

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 7e-07
 Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 207 WSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
           W     K      GH   V +       + ++S S D ++ +W   +  +CL
Sbjct: 1   WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWS-AVTGKCL 50

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (108), Expect = 3e-06
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 283 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
              K L GH + VI       G ++++ S D    ++   TG  L++L      + ++ 
Sbjct: 7   KSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 64

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 38/229 (16%), Positives = 72/229 (31%), Gaps = 35/229 (15%)

Query: 142 SAQKLKTTNKLKVQTSKIVSSFKTS---LLSCYK--------------IRSFSGHRDGVW 184
              +LK+   LK     +++  +     ++S                 +R+  GH  GVW
Sbjct: 2   RRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW 61

Query: 185 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 244
              +R    +    S      L           ++ +  +        ++  V+S S D 
Sbjct: 62  SSQMRDNIII----SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 117

Query: 245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDE------------SSITLRTPVKELLGHS 292
           ++ +W         V      +      +                     T +  L GH+
Sbjct: 118 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 177

Query: 293 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
           N V +  +  DG  V++ S D    ++DVETG  + +LT          
Sbjct: 178 NRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 224

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 63.5 bits (152), Expect = 6e-12
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 1/78 (1%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFL 231
            +   GH   +  ++       L SA A+  +  W   TG     +   H+  +  ++  
Sbjct: 5   DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64

Query: 232 PNKDLVLSASGDKSVHIW 249
              DL   +  D    + 
Sbjct: 65  SKGDLFTVSWDDHLKVVP 82

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 55.8 bits (132), Expect = 2e-09
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNS 227
                S++ H   V  V+  P    L + S D +V +W+        ++    H+ S  +
Sbjct: 214 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVN 273

Query: 228 VRFLPNKDLVLSASGDKSVHIW 249
                N+  ++SA  D ++  W
Sbjct: 274 SVIWLNETTIVSAGQDSNIKFW 295

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.6 bits (116), Expect = 2e-07
 Identities = 6/40 (15%), Positives = 16/40 (40%)

Query: 212 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 251
           G       GH+ ++ ++    +   + SA  +  ++ W  
Sbjct: 2   GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI 41

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 46.1 bits (107), Expect = 3e-06
 Identities = 10/48 (20%), Positives = 22/48 (45%)

Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332
            +   GH+  + A    +DG+ + +A  +   N +D+ TG   +   +
Sbjct: 5   DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPD 52

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.3 bits (84), Expect = 0.002
 Identities = 7/40 (17%), Positives = 15/40 (37%)

Query: 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 208
           S + I     H     +  +   +  + SA  D  ++ W+
Sbjct: 257 SDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.3 bits (84), Expect = 0.002
 Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 26/90 (28%)

Query: 232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH 291
           P+   + + S D SV +W                 ++++  +          P+     H
Sbjct: 234 PDNVRLATGSLDNSVIVW-----------------NMNKPSDH---------PIIIKGAH 267

Query: 292 SNVVIAADWLSDGEQVITASWDRVANLFDV 321
           +   + +    +   +++A  D     ++V
Sbjct: 268 AMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.1 bits (151), Expect = 7e-12
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSV 228
             KI + S              + ++ + S D  + ++S +   K +   + H   VN++
Sbjct: 205 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNL 264

Query: 229 RFLPNKDLVLSASGDKSVHIWQAV 252
            +     LV S+  D  +  W  V
Sbjct: 265 LWETPSTLV-SSGADACIKRWNVV 287

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.5 bits (147), Expect = 2e-11
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 9/85 (10%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
           +++ SGH  G+  + V P    L S S D  +  WS+ +         HS  + S+    
Sbjct: 6   LKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNSK 56

Query: 233 NKDLVLSASGDKSVHIWQAVINWEC 257
            ++    +  D           +  
Sbjct: 57  AQEYSSISWDDTLKVNGITKHEFGS 81

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.3 bits (92), Expect = 2e-04
 Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 211 TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
             + +   SGH+  + ++   P    ++S S D  +  W
Sbjct: 2   HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEW 36

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.6 bits (90), Expect = 3e-04
 Identities = 14/115 (12%), Positives = 32/115 (27%), Gaps = 28/115 (24%)

Query: 207 WSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDS 266
                   +   S       +      +DLV + S D ++ I+                 
Sbjct: 200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY----------------- 242

Query: 267 DLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
            +    +           +K L  H + V    W +    ++++  D     ++V
Sbjct: 243 SVKRPMKI----------IKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV 286

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (145), Expect = 5e-11
 Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 17/179 (9%)

Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF- 230
           +I   S    GV+   ++     + S   D T+++W   T +C    +GH+GSV  +++ 
Sbjct: 7   RIHCRSETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64

Query: 231 ------------LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESS 278
                       +   D+      +  +H  +AV++           S        D +S
Sbjct: 65  ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMAS 124

Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI 337
            T  T  + L+GH   V   D+  D + +++AS DR   +++  T   +++L      I
Sbjct: 125 PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI 181

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (140), Expect = 2e-10
 Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 29/147 (19%)

Query: 197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW------- 249
           SAS DRT+++W+T T + V   +GH   +  +++     LV+S S D ++ +W       
Sbjct: 153 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGAC 210

Query: 250 ------------QAVINWECLVSNNDNDS----DLDESKEPDESSITLRTPVKELLGHSN 293
                           + + +VS   +      DL  + +P   + TL   ++ L+ HS 
Sbjct: 211 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL--CLRTLVEHSG 268

Query: 294 VVIAADWLSDGEQVITASWDRVANLFD 320
            V    +  D  Q++++S D    ++D
Sbjct: 269 RVFRLQF--DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (115), Expect = 3e-07
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 11/64 (17%)

Query: 195 LGSASADRTVRLWSTQTG---------KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 245
           + S + D  +++W               C+     HSG V  ++F  ++  ++S+S D +
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDT 288

Query: 246 VHIW 249
           + IW
Sbjct: 289 ILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW 207
           +R+   H   V+ +     Q  + S+S D T+ +W
Sbjct: 260 LRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (86), Expect = 0.001
 Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 282 RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
           R  ++ +   S        L  D +++++   D    ++D  T    + LT    ++  
Sbjct: 2   RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLC 60

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.4 bits (139), Expect = 3e-10
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 195 LGSASADRTVRLWSTQTGKCVLQYSGHSGSV--NSVRFLPNKD-LVLSASGDKSVHIW 249
             +  AD T+R+W   T KCV +++     +    V  +   +  ++S S D +++ +
Sbjct: 266 FATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.2 bits (110), Expect = 1e-06
 Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRT-VRLW--STQTGKCVLQYSGHSGS-VNSVRFLP 232
           S  R+    ++  P    +         VR           V+Q++GH  S V +V+F P
Sbjct: 14  STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 73

Query: 233 NKD--LVLSASGDKSVHIWQAVINWEC 257
            K    + S      V +W    + E 
Sbjct: 74  IKGSQYLCSGDESGKVIVWGWTFDKES 100

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.8 bits (96), Expect = 8e-05
 Identities = 18/134 (13%), Positives = 34/134 (25%), Gaps = 17/134 (12%)

Query: 137 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQP-- 193
           L+ +P+   +          S  V            +  F+GH    V  V   P +   
Sbjct: 23  LSYDPTTNAIAYPC----GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ 78

Query: 194 VLGSASADRTVRLWSTQTGKCVLQ--------YSGHSGSVNSVRFLPN--KDLVLSASGD 243
            L S      V +W     K            +   +G ++ + +     +  V+    D
Sbjct: 79  YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 138

Query: 244 KSVHIWQAVINWEC 257
                         
Sbjct: 139 NFGVFISWDSGNSL 152

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.6 bits (137), Expect = 8e-10
 Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 15/85 (17%)

Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC------VLQYSGHSGSVNSVRFL 231
            H   ++ V+      V  S S D  +++W  +             +  H   ++ V  L
Sbjct: 12  AHDADIFSVSACNSFTV--SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69

Query: 232 -------PNKDLVLSASGDKSVHIW 249
                      LV + S    +  +
Sbjct: 70  QAIERDAFELCLVATTSFSGDLLFY 94

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.7 bits (127), Expect = 1e-08
 Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 5/110 (4%)

Query: 158 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ 217
           + + S      S         H   V  ++       L SA  D  +R W  +T + +  
Sbjct: 267 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITT 326

Query: 218 YSGHSGSV----NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNND 263
            + H   +    + +    + D +    G   V   +           N+
Sbjct: 327 LNMHCDDIEIEEDILAVDEHGDSLAEP-GVFDVKFLKKGWRSGMGADLNE 375

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.6 bits (106), Expect = 5e-06
 Identities = 31/257 (12%), Positives = 81/257 (31%), Gaps = 19/257 (7%)

Query: 91  NLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTN 150
            +  +D+   ++ +       + K      ++   + ++  + + V         +   +
Sbjct: 95  RITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH 154

Query: 151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS-- 208
               +++ +  ++  +L     + S          V +     ++ +   + TV++    
Sbjct: 155 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS 213

Query: 209 ----TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDN 264
                   +       +S S+ SV+F P   L+  A    S                   
Sbjct: 214 TLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT------------LY 261

Query: 265 DSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
           +++  E                    HS+ V++  +   GE + +A WD     +DV+T 
Sbjct: 262 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 321

Query: 325 TILQSLTEPGEAIRAAA 341
             + +L    + I    
Sbjct: 322 ERITTLNMHCDDIEIEE 338

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.8 bits (104), Expect = 1e-05
 Identities = 21/165 (12%), Positives = 48/165 (29%), Gaps = 33/165 (20%)

Query: 172 KIRSFSGHRDGVWDVAVRPGQP-------VLGSASADRTVRLWSTQTGKC---------- 214
           K  S   H+ G+  V V            ++ + S    +  +                 
Sbjct: 52  KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD 111

Query: 215 VLQYSGHSGSVNSVRFLPNKD-----LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLD 269
           +L       S  ++++  + D      +++     + +IW             D  + L 
Sbjct: 112 LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIW-------KFHPFADESNSLT 164

Query: 270 ESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR 314
            +  P    + L+  V+  +  S    + D    G  + T   + 
Sbjct: 165 LNWSPT---LELQGTVESPMTPSQFATSVDISERG-LIATGFNNG 205

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 56.8 bits (135), Expect = 1e-09
 Identities = 17/187 (9%), Positives = 42/187 (22%), Gaps = 24/187 (12%)

Query: 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-------VLQYSG 220
           +   KI + +      +  A       L   S                            
Sbjct: 166 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPL 225

Query: 221 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC-----------------LVSNND 263
             GS N  + +P      +   D +    ++                        V  + 
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG 285

Query: 264 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 323
             +   +        +      +++    N +      +D + V+    D     F +E 
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345

Query: 324 GTILQSL 330
               +++
Sbjct: 346 PEDERTV 352

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 51.3 bits (121), Expect = 6e-08
 Identities = 16/170 (9%), Positives = 42/170 (24%), Gaps = 13/170 (7%)

Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPN 233
                  +   A       L   +    +      +G           + +  +  + P 
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249

Query: 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN 293
               ++                  LV   D       S+            + +      
Sbjct: 250 GWQQVAYHRALDRIYL--------LVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE 301

Query: 294 VVIAADWLSDGEQ--VITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
           +  + +   D +      ++ D+   + D E+G  L+S+ + G   +   
Sbjct: 302 ID-SINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVIT 350

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.6 bits (88), Expect = 8e-04
 Identities = 6/57 (10%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 179 HRDGVWDVAVRP-GQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
               +  + V    +P+L   ++ D+T+ +   ++G+ +   +        +     
Sbjct: 298 MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 49.0 bits (115), Expect = 4e-07
 Identities = 14/162 (8%), Positives = 43/162 (26%), Gaps = 31/162 (19%)

Query: 183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRFLPNKDLVLSAS 241
                 +  +    +A           +TGK   Q ++  +    +    P     +   
Sbjct: 211 YTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV 270

Query: 242 GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL 301
            +  +  +                 DL + K            + +     +      + 
Sbjct: 271 LN-RLAKY-----------------DLKQRK------------LIKAANLDHTYYCVAFD 300

Query: 302 SDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR 343
             G+++          +F+ +T   ++++  PG  +     +
Sbjct: 301 KKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQ 342

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 43.2 bits (100), Expect = 3e-05
 Identities = 3/73 (4%), Positives = 17/73 (23%), Gaps = 2/73 (2%)

Query: 186 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPN-KDLVLSASGD 243
            A++ G   +   +    + +    +                +    P+ +   +  +  
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61

Query: 244 KSVHIWQAVINWE 256
             ++         
Sbjct: 62  GDIYGIDLDTCKN 74

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 39.7 bits (91), Expect = 3e-04
 Identities = 8/64 (12%), Positives = 20/64 (31%), Gaps = 2/64 (3%)

Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV--LQYSGHSGSVNSV 228
            K+   +      + VA       L        + +++  T + V  ++  G   S  + 
Sbjct: 282 RKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTP 341

Query: 229 RFLP 232
           +   
Sbjct: 342 QVFI 345

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 48.6 bits (115), Expect = 5e-07
 Identities = 23/181 (12%), Positives = 43/181 (23%), Gaps = 38/181 (20%)

Query: 184 WDVAV----RPGQPVLG---------SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
           W V V    RP Q +           +      + L    T +           V+  R 
Sbjct: 11  WKVHVAPEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRL 69

Query: 231 LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG 290
             +   +     D  V++                  DL       E +      +     
Sbjct: 70  SASGRYLFVIGRDGKVNMI-----------------DLW----MKEPTTVAEIKI--GSE 106

Query: 291 HSNVVIAADWLSDGEQVI-TASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIR 349
             ++  +     + +  I  A W     + D ET    +  +  G             + 
Sbjct: 107 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA 166

Query: 350 A 350
           A
Sbjct: 167 A 167

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.1 bits (85), Expect = 0.003
 Identities = 13/111 (11%), Positives = 20/111 (18%), Gaps = 8/111 (7%)

Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-----VLQYSGHSGSVNS 227
                     V    +      L     D  V +      +      +   S       S
Sbjct: 55  KTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETS 113

Query: 228 VRFLPN-KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDES 277
                  K  +  A       I       E     +      DE +   E 
Sbjct: 114 KMEGWEDKYAIAGAYWPPQYVIMDG-ETLEPKKIQSTRGMTYDEQEYHPEP 163

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 45.2 bits (105), Expect = 7e-06
 Identities = 15/163 (9%), Positives = 36/163 (22%), Gaps = 30/163 (18%)

Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 238
                     R         +    +     +TG+  ++             +       
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255

Query: 239 SASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA 298
                  +  +                 DL+++               + +   +   + 
Sbjct: 256 -FGAYNVLESF-----------------DLEKNA------------SIKRVPLPHSYYSV 285

Query: 299 DWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
           +  +DG  V           +D ET      +  PG A  + A
Sbjct: 286 NVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLA 328

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 40.2 bits (92), Expect = 3e-04
 Identities = 3/56 (5%), Positives = 16/56 (28%), Gaps = 3/56 (5%)

Query: 197 SASADRTVRLWSTQTGKCV--LQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIW 249
           + +    + +  T+       +  +    +       P  +    + +  +S+   
Sbjct: 6   APARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.8 bits (91), Expect = 3e-04
 Identities = 6/59 (10%), Positives = 14/59 (23%), Gaps = 4/59 (6%)

Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV----LQYSGHSGSVNSVRFLP 232
                 + V V      +    A   +  +  +T +      L  +      +   F  
Sbjct: 277 PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTR 335

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 36.7 bits (83), Expect = 0.004
 Identities = 7/79 (8%), Positives = 22/79 (27%), Gaps = 6/79 (7%)

Query: 177 SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-----SVNSVRF 230
           +          V P G+    + +   ++      TG+ + +    +      S+     
Sbjct: 30  ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAAL 89

Query: 231 LPNKDLVLSASGDKSVHIW 249
            P+   +        + + 
Sbjct: 90  SPDGKTLAIYESPVRLELT 108

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 44.6 bits (104), Expect = 1e-05
 Identities = 20/170 (11%), Positives = 40/170 (23%), Gaps = 25/170 (14%)

Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
             R       +        +      + L    + K V         V+  R   +   +
Sbjct: 18  EDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYL 76

Query: 238 LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA 297
           L    D  + +                D    E  +  E        +K  +   +V  +
Sbjct: 77  LVIGRDARIDMI---------------DLWAKEPTKVAE--------IKIGIEARSVESS 113

Query: 298 ADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
                +    I  + W     + D ET    Q ++  G  +         
Sbjct: 114 KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEP 163

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.2 bits (103), Expect = 1e-05
 Identities = 11/178 (6%), Positives = 44/178 (24%), Gaps = 12/178 (6%)

Query: 155 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC 214
             +    +   +       +                   ++ + ++              
Sbjct: 186 SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATM 245

Query: 215 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEP 274
                G+     +  F      +++   +    +          ++   + S L  ++  
Sbjct: 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI---------LTVEHSRSCLAAAENT 296

Query: 275 DESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSL 330
              + ++      +  + +   A     DG     A+     V +++D  +     S+
Sbjct: 297 SSVTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 43.0 bits (100), Expect = 3e-05
 Identities = 18/192 (9%), Positives = 37/192 (19%), Gaps = 25/192 (13%)

Query: 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-------- 232
            G                     V ++   T   +           SV            
Sbjct: 75  SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134

Query: 233 NKDLVLSASGDKSVHIWQA--------VINWECLVSNNDN---------DSDLDESKEPD 275
           +  L+    G  +                +  C   +             + L  S    
Sbjct: 135 SACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA 194

Query: 276 ESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE 335
             +       +     +    AA     G  V   +   +         T+  ++     
Sbjct: 195 APAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNES 254

Query: 336 AIRAAAGRTGGP 347
             +A   R+ G 
Sbjct: 255 GRKADNFRSAGF 266

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 43.7 bits (101), Expect = 1e-05
 Identities = 7/62 (11%), Positives = 16/62 (25%), Gaps = 2/62 (3%)

Query: 197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINW 255
           + S    + +    + K        S         P+   + ++ +    V I     N 
Sbjct: 7   ANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65

Query: 256 EC 257
             
Sbjct: 66  VI 67

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 40.6 bits (93), Expect = 2e-04
 Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 2/44 (4%)

Query: 173 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCV 215
                   D    +AV P G+ V  + S   TV +  T T    
Sbjct: 237 TARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTIT 279

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Length = 302

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG 242
           + ++A  P   +  +      +   +         ++   G V+ + F  N DLV +   
Sbjct: 30  LENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWN 87

Query: 243 DKSVHIWQAVINWEC 257
             S+ +   V +   
Sbjct: 88  ADSIPVVSLVKSDGT 102

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	360
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.96
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.95
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.95
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.95
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.94
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.93
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.93
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.93
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.93
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.91
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.9
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.9
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.89
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.89
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.88
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.88
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.88
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.88
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.87
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.86
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.85
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.84
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.84
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.84
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.81
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.8
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.78
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.77
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.76
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.74
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.67
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.61
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.6
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.54
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.51
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.49
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.48
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.48
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.43
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.38
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.38
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.38
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.27
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.23
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.21
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.17
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.02
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.96
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.77
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.72
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.46
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.44
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.44
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.41
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.28
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.23
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.19
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.13
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.12
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.1
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.02
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.02
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.99
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.9
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.88
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	97.75
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.75
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.56
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.35
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.25
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.14
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	96.84
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	94.76
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	94.16
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	94.08
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	94.06
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	93.77
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	93.75
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.56
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.28
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.11
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	92.36
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	92.28
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	91.62
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	91.25
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	90.17
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	88.74
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	88.7
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	87.24
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	86.65
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	85.07
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	84.58
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	84.47
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	84.44
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	82.74
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	82.51
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	82.22
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	80.39

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=9.9e-28  Score=213.59  Aligned_cols=188  Identities=14%  Similarity=0.129  Sum_probs=143.8

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      +..++|+||++.|++|+|+|++++|+||+.||+|+|||+.+++.+..+.+|.+.|.+++|+|++.++++|+.|+.+++|+
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~  125 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccc
Confidence            35578999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccCeeEee----eCCC---------------------------------------------------CC--------CC
Q psy11015        251 AVINWECLV----SNND---------------------------------------------------ND--------SD  267 (360)
Q Consensus       251 ~~~~~~~~~----~~~~---------------------------------------------------~~--------~~  267 (360)
                      .........    ...+                                                   ..        ..
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  205 (340)
T d1tbga_         126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD  205 (340)
T ss_dssp             SSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecC
Confidence            654311000    0000                                                   00        00


Q ss_pred             CC------------------------CCCCCC---------CCcc-----ccccceeEe--eCCCCcEEEEEEcCCCCEE
Q psy11015        268 LD------------------------ESKEPD---------ESSI-----TLRTPVKEL--LGHSNVVIAADWLSDGEQV  307 (360)
Q Consensus       268 ~~------------------------~~~~~~---------~~~~-----~~~~~~~~~--~~h~~~v~~i~~sp~g~~l  307 (360)
                      ..                        ....+.         +...     ........+  ..|...|.+++|+|+|++|
T Consensus       206 ~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  285 (340)
T d1tbga_         206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL  285 (340)
T ss_dssp             TEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEE
T ss_pred             ceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEE
Confidence            00                        000000         0000     000111222  2455678999999999999


Q ss_pred             EEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        308 ITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       308 ~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ++|+.||.|++||+.+++++.++.+|.++|++++|+|+|.+++|++ |+.||
T Consensus       286 ~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~  337 (340)
T d1tbga_         286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK  337 (340)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred             EEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEE
Confidence            9999999999999999999999999999999999999999888765 66665

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=3.4e-27  Score=207.13  Aligned_cols=187  Identities=21%  Similarity=0.324  Sum_probs=144.5

Q ss_pred             eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC------------------
Q psy11015        172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN------------------  233 (360)
Q Consensus       172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~------------------  233 (360)
                      ...+|+||+++|++|+|+|++++|+||+.||+|+|||+.+++++..+.+|.+.|.+++|+|+                  
T Consensus         9 ~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (317)
T d1vyhc1           9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF   88 (317)
T ss_dssp             CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred             ccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccc
Confidence            34678999999999999999999999999999999999999888888887777777666654                  


Q ss_pred             ------------------------CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC-------------------
Q psy11015        234 ------------------------KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE-------------------  270 (360)
Q Consensus       234 ------------------------~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~-------------------  270 (360)
                                              ++.+++++.|+.+++||+.++........+.......                   
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~  168 (317)
T d1vyhc1          89 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR  168 (317)
T ss_dssp             TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             cccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEE
Confidence                                    4457788888899999988765443332220000000                   


Q ss_pred             -CC----------------------CC-----------------------------CCC-----ccccccceeEeeCCCC
Q psy11015        271 -SK----------------------EP-----------------------------DES-----SITLRTPVKELLGHSN  293 (360)
Q Consensus       271 -~~----------------------~~-----------------------------~~~-----~~~~~~~~~~~~~h~~  293 (360)
                       ..                      .+                             .+.     ......++..+.+|..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~  248 (317)
T d1vyhc1         169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN  248 (317)
T ss_dssp             EEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred             EEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCC
Confidence             00                      00                             000     0112235677788999


Q ss_pred             cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        294 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       294 ~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .|.+++|+|++++|++|+.||.|++||+.+++++.++.+|.++|++++|+|++++|+|++ |+.||
T Consensus       249 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~  314 (317)
T d1vyhc1         249 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK  314 (317)
T ss_dssp             CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEE
T ss_pred             CEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEE
Confidence            999999999999999999999999999999999999999999999999999999888765 56665

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=3.9e-26  Score=207.76  Aligned_cols=204  Identities=15%  Similarity=0.118  Sum_probs=160.7

Q ss_pred             ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEe
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~  231 (360)
                      +..+..+.+|.........+..+.+|.++|++++|+|++++|+||+.|++|+|||+.++.  +...+.+|...|.+++|+
T Consensus        25 ~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~  104 (371)
T d1k8kc_          25 CPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA  104 (371)
T ss_dssp             ECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred             EeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccc
Confidence            445566777887767777889999999999999999999999999999999999998775  445567889999999999


Q ss_pred             eCCCEEEEEeCCCcEEEEEcccCeeEee---eCC-CCC--------CCCCCC-CCCCC----------------------
Q psy11015        232 PNKDLVLSASGDKSVHIWQAVINWECLV---SNN-DND--------SDLDES-KEPDE----------------------  276 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~---~~~-~~~--------~~~~~~-~~~~~----------------------  276 (360)
                      |+++.|++|+.|+++++|++........   ... +..        +..... ....+                      
T Consensus       105 p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~  184 (371)
T d1k8kc_         105 PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW  184 (371)
T ss_dssp             TTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTT
T ss_pred             cccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccc
Confidence            9999999999999999998865432111   110 000        000000 00000                      


Q ss_pred             -CccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015        277 -SSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLL  355 (360)
Q Consensus       277 -~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~  355 (360)
                       .............+|...|.+++|+|+|++|++|+.||.|++||+.++..+..+..|..+|++++|+|+|.+++++.|.
T Consensus       185 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~  264 (371)
T d1k8kc_         185 GSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDC  264 (371)
T ss_dssp             BSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTS
T ss_pred             cccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEEEcCC
Confidence             0011123455667899999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             ch
Q psy11015        356 AI  357 (360)
Q Consensus       356 ~i  357 (360)
                      .+
T Consensus       265 ~~  266 (371)
T d1k8kc_         265 FP  266 (371)
T ss_dssp             SC
T ss_pred             ce
Confidence            54

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=5.2e-26  Score=202.20  Aligned_cols=165  Identities=15%  Similarity=0.169  Sum_probs=144.6

Q ss_pred             cCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEEEeCCCcCeEEEEEeeCCCEEEEEeC
Q psy11015        165 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASG  242 (360)
Q Consensus       165 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~~~~l~s~s~  242 (360)
                      ++..+....+.+.+|.+.|++++|+|+|++|++|+.||+|+|||+.++..  ...+.+|.+.|.+++|+|+++++++++.
T Consensus        43 ~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~  122 (311)
T d1nr0a1          43 VPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGE  122 (311)
T ss_dssp             EETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEEC
T ss_pred             EECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccc
Confidence            33445677778899999999999999999999999999999999988753  4568899999999999999999999886


Q ss_pred             --CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCE-EEEEECCCcEEEE
Q psy11015        243 --DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ-VITASWDRVANLF  319 (360)
Q Consensus       243 --d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~-l~tgs~dg~i~iw  319 (360)
                        ++.+++|++.++                            .+...+.+|...|++++|+|++++ +++|+.||.|++|
T Consensus       123 ~~~~~~~v~~~~~~----------------------------~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~  174 (311)
T d1nr0a1         123 GRERFGHVFLFDTG----------------------------TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF  174 (311)
T ss_dssp             CSSCSEEEEETTTC----------------------------CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEE
T ss_pred             cccccccccccccc----------------------------cccccccccccccccccccccceeeecccccccccccc
Confidence              466999998765                            345667889999999999999985 7899999999999


Q ss_pred             ECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        320 DVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       320 d~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      |+++++....+..|..+|++++|+|+|++++++. |+.|
T Consensus       175 d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v  213 (311)
T d1nr0a1         175 EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTI  213 (311)
T ss_dssp             ETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             cccccccccccccccccccccccCccccccccccccccc
Confidence            9999999999999999999999999999998776 4443

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.94  E-value=4.8e-25  Score=195.92  Aligned_cols=178  Identities=17%  Similarity=0.181  Sum_probs=153.9

Q ss_pred             eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015        153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA--DRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~--Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~  230 (360)
                      .+.....+.+|............+.+|.++|.+++|+|++++|++++.  ++.++||++++++....+.+|...|.+++|
T Consensus        75 tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~  154 (311)
T d1nr0a1          75 SGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDF  154 (311)
T ss_dssp             EEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEE
T ss_pred             ccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            455556666777766666667789999999999999999999999986  456999999999999999999999999999


Q ss_pred             eeCCCE-EEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        231 LPNKDL-VLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       231 ~p~~~~-l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      +|++++ +++|+.|++|++||++++                            .....+.+|...|++++|+|+++++++
T Consensus       155 ~~~~~~~l~sgs~d~~i~i~d~~~~----------------------------~~~~~~~~~~~~i~~v~~~p~~~~l~~  206 (311)
T d1nr0a1         155 KPSRPFRIISGSDDNTVAIFEGPPF----------------------------KFKSTFGEHTKFVHSVRYNPDGSLFAS  206 (311)
T ss_dssp             CSSSSCEEEEEETTSCEEEEETTTB----------------------------EEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             cccceeeeccccccccccccccccc----------------------------ccccccccccccccccccCcccccccc
Confidence            999885 788999999999999876                            345667789999999999999999999


Q ss_pred             EECCCcEEEEECCCCeEEEEEe-------cCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        310 ASWDRVANLFDVETGTILQSLT-------EPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~~~~l~-------~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      |+.||.+++||..++..+..+.       +|.+.|++++|+|+|++++|++ |+.||
T Consensus       207 ~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~  263 (311)
T d1nr0a1         207 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK  263 (311)
T ss_dssp             EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEE
Confidence            9999999999999998887764       5788999999999999999886 45443

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.4e-24  Score=197.30  Aligned_cols=204  Identities=17%  Similarity=0.190  Sum_probs=146.1

Q ss_pred             ecCCeEEEeeecCccce--eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe------------
Q psy11015        154 VQTSKIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS------------  219 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~------------  219 (360)
                      +........|.......  ..+....+|++.|+||+|+|+|++|++|+ |++|+|||+.+++.+..+.            
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~  112 (388)
T d1erja_          34 KQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENL  112 (388)
T ss_dssp             EECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------
T ss_pred             cCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeeccccccccccccc
Confidence            33444444555443221  12233347999999999999999999987 8999999999998877664            


Q ss_pred             ------CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC--------------------------
Q psy11015        220 ------GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSD--------------------------  267 (360)
Q Consensus       220 ------~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~--------------------------  267 (360)
                            +|...|++++|+|++++|++|+.||+|++||...+........+....                          
T Consensus       113 ~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~  192 (388)
T d1erja_         113 NTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL  192 (388)
T ss_dssp             ------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             ccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeec
Confidence                  356679999999999999999999999999987765443332220000                          


Q ss_pred             ------------------------CCC-CCCCCCC---------------------------------------------
Q psy11015        268 ------------------------LDE-SKEPDES---------------------------------------------  277 (360)
Q Consensus       268 ------------------------~~~-~~~~~~~---------------------------------------------  277 (360)
                                              ... .....+.                                             
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~  272 (388)
T d1erja_         193 RTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG  272 (388)
T ss_dssp             TTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred             cccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEE
Confidence                                    000 0000000                                             


Q ss_pred             ----ccc-----------------cccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc
Q psy11015        278 ----SIT-----------------LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA  336 (360)
Q Consensus       278 ----~~~-----------------~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~  336 (360)
                          ...                 ..........|...|.+++|+|+|++|++|+.||.|++||+.+++++.++.+|.+.
T Consensus       273 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~  352 (388)
T d1erja_         273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS  352 (388)
T ss_dssp             ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred             ECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCC
Confidence                000                 00012334457788999999999999999999999999999999999999999999


Q ss_pred             eEEEEE------cCCCCEEEccc-ccchh
Q psy11015        337 IRAAAG------RTGGPIRASPL-LLAIR  358 (360)
Q Consensus       337 v~~~~~------~~~g~~las~~-~~~ir  358 (360)
                      |+++++      +|+|.++||++ |+.||
T Consensus       353 V~~~~~~~~~~~spd~~~l~s~s~Dg~I~  381 (388)
T d1erja_         353 VISVAVANGSSLGPEYNVFATGSGDCKAR  381 (388)
T ss_dssp             EEEEEECSSCTTCTTCEEEEEEETTSEEE
T ss_pred             EEEEEEecCcccCCCCCEEEEEeCCCEEE
Confidence            999975      67899998866 56665

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=2.1e-25  Score=204.41  Aligned_cols=164  Identities=18%  Similarity=0.225  Sum_probs=132.2

Q ss_pred             eecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE------eCCCcCeEEEEEeeCCCEEEEEeCCCc---E
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY------SGHSGSVNSVRFLPNKDLVLSASGDKS---V  246 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~------~~h~~~v~~i~~~p~~~~l~s~s~d~~---i  246 (360)
                      ...+...+++++|+|++ +|+||+.||+|+|||+.+++++..+      .+|..+|++++|+|+|++|++|+.|++   |
T Consensus       180 ~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i  258 (393)
T d1sq9a_         180 PMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCI  258 (393)
T ss_dssp             SSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEE
T ss_pred             ccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCccee
Confidence            34566779999999998 9999999999999999999877655      468999999999999999999999975   8


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI  326 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~  326 (360)
                      ++||+.++..........               ........+.+|.+.|++++|+|+|++|+|||.||+|++||+.+|++
T Consensus       259 ~lwd~~~g~~~~~l~~~~---------------~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~  323 (393)
T d1sq9a_         259 TLYETEFGERIGSLSVPT---------------HSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER  323 (393)
T ss_dssp             EEEETTTCCEEEEECBC-----------------------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred             eecccccceeeeeecccc---------------ccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCE
Confidence            999999886554322110               11123445668999999999999999999999999999999999999


Q ss_pred             EEEEecCCCceE----EEEEcCCCCEEEccccc
Q psy11015        327 LQSLTEPGEAIR----AAAGRTGGPIRASPLLL  355 (360)
Q Consensus       327 ~~~l~~h~~~v~----~~~~~~~g~~las~~~~  355 (360)
                      +.++.+|.+.|.    .++|+|+|..++++...
T Consensus       324 ~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~  356 (393)
T d1sq9a_         324 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF  356 (393)
T ss_dssp             EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEE
T ss_pred             EEEECCcCCcccCCccEEEECCCCCEEEEcccc
Confidence            999999987775    46778877776665443

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.8e-24  Score=191.06  Aligned_cols=160  Identities=15%  Similarity=0.202  Sum_probs=144.7

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      .++.+.....+|.+.|++++|++++..+++|+.|+.|++||+++++.+..+. |.+.|.+++|+|+++++++|+.|+.++
T Consensus       171 ~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~  249 (337)
T d1gxra_         171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVE  249 (337)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccceeecccc-cccceEEEEEcccccccceeccccccc
Confidence            4567788889999999999999999999999999999999999999888876 889999999999999999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +||+.++                             .......|...|++++|+|+|++|++|+.||.|++||+.+++.+
T Consensus       250 i~d~~~~-----------------------------~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~  300 (337)
T d1gxra_         250 VLHVNKP-----------------------------DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI  300 (337)
T ss_dssp             EEETTSS-----------------------------CEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             ccccccc-----------------------------ccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEE
Confidence            9999866                             23445679999999999999999999999999999999999998


Q ss_pred             EEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        328 QSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       328 ~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ..+. |...|++++|+|+|++|+|++ |+.||
T Consensus       301 ~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~  331 (337)
T d1gxra_         301 FQSK-ESSSVLSCDISVDDKYIVTGSGDKKAT  331 (337)
T ss_dssp             EEEE-CSSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred             EEcc-CCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence            8875 778999999999999998865 56664

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=7.3e-25  Score=199.28  Aligned_cols=152  Identities=13%  Similarity=0.167  Sum_probs=131.3

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~  257 (360)
                      .++|+|++|+|++.+|++|+.||.|+|||..+++  ++..+.+|.++|.+++|+|++++|++|+.|++|+|||+.++.. 
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~-   85 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW-   85 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE-
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc-
Confidence            4789999999999999999999999999998775  6778899999999999999999999999999999999876532 


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE----EEEEecC
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI----LQSLTEP  333 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~----~~~l~~h  333 (360)
                                               .+...+.+|...|.+++|+|++++|++|+.|+++++|++.....    ......|
T Consensus        86 -------------------------~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~  140 (371)
T d1k8kc_          86 -------------------------KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI  140 (371)
T ss_dssp             -------------------------EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC
T ss_pred             -------------------------ccccccccccccccccccccccccceeecccCcceeeeeeccccccccccccccc
Confidence                                     23455668899999999999999999999999999998865432    2344568


Q ss_pred             CCceEEEEEcCCCCEEEccc-ccch
Q psy11015        334 GEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      ...|++++|+|+|.++++++ |+.|
T Consensus       141 ~~~v~~v~~~p~~~~l~s~s~D~~v  165 (371)
T d1k8kc_         141 RSTVLSLDWHPNSVLLAAGSCDFKC  165 (371)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccceeccccCcEE
Confidence            89999999999999998875 4444

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.2e-23  Score=186.00  Aligned_cols=85  Identities=12%  Similarity=0.080  Sum_probs=72.4

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE---EEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC---VLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSV  246 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~---~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i  246 (360)
                      +++...++|++.|++|+|+|++++|++||.||+|+|||+.++..   +....+|.++|.+++|+|++ .+|++|+.|++|
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v   81 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred             CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccce
Confidence            46677889999999999999999999999999999999976532   23334699999999999875 589999999999


Q ss_pred             EEEEcccCe
Q psy11015        247 HIWQAVINW  255 (360)
Q Consensus       247 ~vwd~~~~~  255 (360)
                      ++|++..+.
T Consensus        82 ~~w~~~~~~   90 (342)
T d1yfqa_          82 LKVDLIGSP   90 (342)
T ss_dssp             EEECSSSSS
T ss_pred             eeeeccccc
Confidence            999987543

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.90  E-value=5.2e-23  Score=180.50  Aligned_cols=184  Identities=13%  Similarity=0.090  Sum_probs=133.5

Q ss_pred             eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015        170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHI  248 (360)
Q Consensus       170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~v  248 (360)
                      |...+.+.||.++|++++|+|++++|+||+.||+|++||+.+++++..+. +|...|.+++|+|++. +++++.|+.+++
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~   80 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKV   80 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEE
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEE
Confidence            56788999999999999999999999999999999999999999888884 6899999999999987 556778999999


Q ss_pred             EEcccCeeEeeeC---CCCCCCCCCCCCCCC--------Ccccccc-ceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcE
Q psy11015        249 WQAVINWECLVSN---NDNDSDLDESKEPDE--------SSITLRT-PVKELLGHSNVVIAADWLSDGEQVITASWDRVA  316 (360)
Q Consensus       249 wd~~~~~~~~~~~---~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i  316 (360)
                      |+...........   ............+..        .....+. ...........+.+++|+|+++++++|+.||.|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i  160 (299)
T d1nr0a2          81 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKV  160 (299)
T ss_dssp             ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred             eccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9976432110000   000000000000000        0000100 001111234467889999999999999999999


Q ss_pred             EEEECCCCeEEE-EEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        317 NLFDVETGTILQ-SLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       317 ~iwd~~~~~~~~-~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                      ++||+.++.... ....|..+|++++|+|++.+++++..
T Consensus       161 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  199 (299)
T d1nr0a2         161 HVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQ  199 (299)
T ss_dssp             EEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred             ccccccccccccccccccccccccccccccccccccccc
Confidence            999998887654 34568899999999999998887653

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.8e-22  Score=177.36  Aligned_cols=177  Identities=11%  Similarity=0.153  Sum_probs=153.0

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL  231 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~  231 (360)
                      +.+..+..+..|............+.+|...|.+++|+|++.++++++.|+.|++|++.++++.....+|...|.+++|+
T Consensus       113 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s  192 (337)
T d1gxra_         113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS  192 (337)
T ss_dssp             EEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred             EEeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34555666777777777778889999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015        232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS  311 (360)
Q Consensus       232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs  311 (360)
                      +++..+++|+.|+.+++||++++..                            +.. ..|...|.+++|+|+++++++|+
T Consensus       193 ~~~~~~~~~~~d~~v~i~d~~~~~~----------------------------~~~-~~~~~~i~~l~~~~~~~~l~~~~  243 (337)
T d1gxra_         193 NDGTKLWTGGLDNTVRSWDLREGRQ----------------------------LQQ-HDFTSQIFSLGYCPTGEWLAVGM  243 (337)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTTEE----------------------------EEE-EECSSCEEEEEECTTSSEEEEEE
T ss_pred             cccccccccccccccccccccccee----------------------------ecc-cccccceEEEEEcccccccceec
Confidence            9999999999999999999987632                            222 34788999999999999999999


Q ss_pred             CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      .||.+++||++++... ....|...|++++|+|+|+++++++ |+.||
T Consensus       244 ~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~  290 (337)
T d1gxra_         244 ESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLN  290 (337)
T ss_dssp             TTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             cccccccccccccccc-cccccccccceEEECCCCCEEEEEeCCCeEE
Confidence            9999999999988865 4557899999999999999888765 45443

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=8.7e-23  Score=178.10  Aligned_cols=184  Identities=12%  Similarity=0.117  Sum_probs=134.3

Q ss_pred             eeeeeeeecCCeEEEeeecCccce---------eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe----
Q psy11015        147 KTTNKLKVQTSKIVSSFKTSLLSC---------YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----  213 (360)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~----  213 (360)
                      ++.+.+.||...+.+.--....++         .......+|...|.++++++++ .+++++.|++|++|++...+    
T Consensus         4 ~~i~~l~gH~~~I~~l~~s~l~sgs~Dg~v~~Wd~~~~~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~~~~~~   82 (287)
T d1pgua2           4 EVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKHEFGSQ   82 (287)
T ss_dssp             EEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEEECSSC
T ss_pred             ceeEEECCCCCceEEEEECcEEEEeCCCeEEEEECCCCCCCCCCCEEEEEecCCC-eEEEEeeccccccccccccccccc
Confidence            455667777776666333222222         1123356788888888887654 57788888888888643210    


Q ss_pred             ------------------------------EEEE-----------------------------E------------eCCC
Q psy11015        214 ------------------------------CVLQ-----------------------------Y------------SGHS  222 (360)
Q Consensus       214 ------------------------------~~~~-----------------------------~------------~~h~  222 (360)
                                                    .+..                             +            ..|.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~  162 (287)
T d1pgua2          83 PKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLR  162 (287)
T ss_dssp             EEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCS
T ss_pred             eeeeeeccCCceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccccceeeeeeeccC
Confidence                                          0000                             0            1255


Q ss_pred             cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC
Q psy11015        223 GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS  302 (360)
Q Consensus       223 ~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp  302 (360)
                      +.+.+++|+|++.+|++|+.||.|++||+.++...                           ...+.+|...|.+++|+|
T Consensus       163 ~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~---------------------------~~~~~~h~~~v~~~~~~p  215 (287)
T d1pgua2         163 AKPSYISISPSETYIAAGDVMGKILLYDLQSREVK---------------------------TSRWAFRTSKINAISWKP  215 (287)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE---------------------------ECCSCCCSSCEEEEEECC
T ss_pred             CceeEEEeccCccccccccccccccceeecccccc---------------------------cccccccccccceeeecc
Confidence            77899999999999999999999999998766322                           223567999999999987


Q ss_pred             C----------CCEEEEEECCCcEEEEECCC-CeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015        303 D----------GEQVITASWDRVANLFDVET-GTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       303 ~----------g~~l~tgs~dg~i~iwd~~~-~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      .          +.++++|+.||+|++||+.+ ++.+..+.+|...|++++|+|++.+++++.|+.||
T Consensus       216 ~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v~  282 (287)
T d1pgua2         216 AEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIK  282 (287)
T ss_dssp             CC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEETTSCEE
T ss_pred             cccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCEEEEEECCCeEE
Confidence            4          46899999999999999976 56777788999999999999999988888888876

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=8e-22  Score=175.76  Aligned_cols=163  Identities=17%  Similarity=0.196  Sum_probs=132.7

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEe---CCCcCeEEEEEeeC-CCEEEEEeC
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYS---GHSGSVNSVRFLPN-KDLVLSASG  242 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~---~h~~~v~~i~~~p~-~~~l~s~s~  242 (360)
                      .++.++..+.+|...|.+++|+|+++ .+++++.|+.|++||..+++....+.   +|...|.+++|+|+ +.++++|+.
T Consensus       147 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~  226 (325)
T d1pgua1         147 DSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS  226 (325)
T ss_dssp             TTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred             cccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceecccccc
Confidence            35678889999999999999999887 57889999999999999887666654   56778999999996 689999999


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc---CCCCEEEEEECCCcEEEE
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL---SDGEQVITASWDRVANLF  319 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s---p~g~~l~tgs~dg~i~iw  319 (360)
                      |+.|++||++++                            ..+..+.+|...+.++.|+   |+|.+|++|+.||.|+||
T Consensus       227 d~~i~iwd~~~~----------------------------~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iw  278 (325)
T d1pgua1         227 DRKISCFDGKSG----------------------------EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVW  278 (325)
T ss_dssp             TCCEEEEETTTC----------------------------CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEE
T ss_pred             ccceeeeeeccc----------------------------cccccccccccccccceeeeeccCCCEEEEEeCCCeEEEE
Confidence            999999998876                            3456667777666544444   689999999999999999


Q ss_pred             ECCCCeEEEEEecCCCc----eEEEEEcCCCCEEEcccccchh
Q psy11015        320 DVETGTILQSLTEPGEA----IRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       320 d~~~~~~~~~l~~h~~~----v~~~~~~~~g~~las~~~~~ir  358 (360)
                      |+++++++..+..|...    ..++.|.+++.+++.+.|+.||
T Consensus       279 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~  321 (325)
T d1pgua1         279 DVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLN  321 (325)
T ss_dssp             ETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEE
T ss_pred             ECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEE
Confidence            99999999988776543    3355666677777666677765

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=9.9e-22  Score=174.23  Aligned_cols=126  Identities=25%  Similarity=0.423  Sum_probs=115.3

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDK  244 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~  244 (360)
                      ..++.++.++.+|.+.|++++|+|++++|++|+.||.|++||+.....+..+.  .|...|.+++|+|++++|++|+.||
T Consensus       213 ~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg  292 (340)
T d1tbga_         213 VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF  292 (340)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTS
T ss_pred             CCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCC
Confidence            35677889999999999999999999999999999999999999998877764  5667799999999999999999999


Q ss_pred             cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy11015        245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD  320 (360)
Q Consensus       245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd  320 (360)
                      .|++||+.++                            .++..+.+|.+.|++++|+|++.+|+|||.||.|+|||
T Consensus       293 ~i~iwd~~~~----------------------------~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         293 NCNVWDALKA----------------------------DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             CEEEEETTTC----------------------------CEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEEECCCC----------------------------cEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            9999998866                            45677889999999999999999999999999999997

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=1.9e-21  Score=172.94  Aligned_cols=182  Identities=20%  Similarity=0.314  Sum_probs=136.8

Q ss_pred             eeeeeecCCCCE-EEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        172 KIRSFSGHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       172 ~~~~l~~h~~~V-~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      ...+|+||.+.| +|++|  ++++|+||+.||+|+|||+.+++++.++.+|.+.|++++|+|+ .+|++|+.|++|++|+
T Consensus         4 ~~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2           4 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWD   80 (355)
T ss_dssp             EEEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEE
T ss_pred             CcEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccc
Confidence            356799999886 66666  4779999999999999999999999999999999999999985 5899999999999999


Q ss_pred             cccCeeEeeeCCCCCC--------------------CCCC--CC---------------------CC-------------
Q psy11015        251 AVINWECLVSNNDNDS--------------------DLDE--SK---------------------EP-------------  274 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~--------------------~~~~--~~---------------------~~-------------  274 (360)
                      +...............                    +...  ..                     ..             
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (355)
T d1nexb2          81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH  160 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred             ccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeec
Confidence            8766443222211000                    0000  00                     00             


Q ss_pred             ------------------CCC-----ccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015        275 ------------------DES-----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT  331 (360)
Q Consensus       275 ------------------~~~-----~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~  331 (360)
                                        .+.     .......+....++...+.++.|+|++.++++++.||.|++||+.++..+..+.
T Consensus       161 ~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~  240 (355)
T d1nexb2         161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ  240 (355)
T ss_dssp             SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             cccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccc
Confidence                              000     001112344556777889999999999999999999999999999999999999


Q ss_pred             cCCCceEEEEEcCCCCEEEcc-cccchh
Q psy11015        332 EPGEAIRAAAGRTGGPIRASP-LLLAIR  358 (360)
Q Consensus       332 ~h~~~v~~~~~~~~g~~las~-~~~~ir  358 (360)
                      +|...|++++|++  .+++++ .|+.||
T Consensus       241 ~h~~~v~~~~~~~--~~l~~~~~dg~i~  266 (355)
T d1nexb2         241 GHTALVGLLRLSD--KFLVSAAADGSIR  266 (355)
T ss_dssp             CCSSCCCEEEECS--SEEEEECTTSEEE
T ss_pred             ccccccccccccc--ceeeeeecccccc
Confidence            9999999999975  455544 465554

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.5e-21  Score=172.62  Aligned_cols=184  Identities=24%  Similarity=0.328  Sum_probs=136.6

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      ...++.+.|+||++.|.+ +++++|++|+|||.||+|+|||+.+++++.++.+|.+.|.+++|+|+  +|++|+.|++++
T Consensus         4 ~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~   80 (342)
T d2ovrb2           4 GELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLK   80 (342)
T ss_dssp             SCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEE
T ss_pred             CCCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceeccccc
Confidence            345677889999999865 35566889999999999999999999999999999999999999864  999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCC-----------------------------------------------CCCCCCC---
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDE-----------------------------------------------SKEPDES---  277 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~---  277 (360)
                      +|+....................                                               .......   
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  160 (342)
T d2ovrb2          81 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK  160 (342)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEE
T ss_pred             ccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEE
Confidence            99987655443322221100000                                               0000000   


Q ss_pred             --ccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-c
Q psy11015        278 --SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-L  354 (360)
Q Consensus       278 --~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~  354 (360)
                        .......+..+.+|...+..+.+  ++.++++|+.||.|++||++.++++..+.+|...+.++++++  +++++++ +
T Consensus       161 ~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~s~d  236 (342)
T d2ovrb2         161 VWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNAD  236 (342)
T ss_dssp             EEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET--TEEEEEETT
T ss_pred             EeecccceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC--CEEEEEcCC
Confidence              01122345666778777666555  789999999999999999999999999999999999988875  4566554 5


Q ss_pred             cchh
Q psy11015        355 LAIR  358 (360)
Q Consensus       355 ~~ir  358 (360)
                      +.||
T Consensus       237 ~~i~  240 (342)
T d2ovrb2         237 STVK  240 (342)
T ss_dssp             SCEE
T ss_pred             CEEE
Confidence            5543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=4.4e-21  Score=170.91  Aligned_cols=181  Identities=19%  Similarity=0.160  Sum_probs=143.1

Q ss_pred             eecCCeEEEeeecCc------cceeeeeeeecCCCCEEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEEEeCCCcC
Q psy11015        153 KVQTSKIVSSFKTSL------LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA--DRTVRLWSTQTGKCVLQYSGHSGS  224 (360)
Q Consensus       153 ~~~~~~~~~~~~~~~------~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~--Dg~v~iwd~~~~~~~~~~~~h~~~  224 (360)
                      .+..+..+.+|....      ........+..|.++|.+++|++++..+++++.  ++.+++|+.++++++..+.+|...
T Consensus        82 sgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~  161 (325)
T d1pgua1          82 SGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQR  161 (325)
T ss_dssp             EEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSC
T ss_pred             EEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccc
Confidence            345555566666533      223344567789999999999999998887764  678999999999999999999999


Q ss_pred             eEEEEEeeCCCE-EEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC
Q psy11015        225 VNSVRFLPNKDL-VLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD  303 (360)
Q Consensus       225 v~~i~~~p~~~~-l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~  303 (360)
                      |.+++|+|++.+ +++++.|+.+++||........                         ......+|...|.+++|+|+
T Consensus       162 v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~-------------------------~~~~~~~~~~~v~~v~~~pd  216 (325)
T d1pgua1         162 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA-------------------------SDRTHHKQGSFVRDVEFSPD  216 (325)
T ss_dssp             EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE-------------------------EECSSSCTTCCEEEEEECST
T ss_pred             cccccccccccceEEEeecccccccccccccccce-------------------------ecccccCCCCccEEeeeccc
Confidence            999999998865 6789999999999987653322                         23334568889999999996


Q ss_pred             -CCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEc---CCCCEEEccc-ccchh
Q psy11015        304 -GEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR---TGGPIRASPL-LLAIR  358 (360)
Q Consensus       304 -g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~---~~g~~las~~-~~~ir  358 (360)
                       +.++++|+.||.|++||+++++.+.++.+|..++.++.|+   |+|.++++++ |+.||
T Consensus       217 ~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~  276 (325)
T d1pgua1         217 SGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIR  276 (325)
T ss_dssp             TCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEE
T ss_pred             cceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEE
Confidence             6899999999999999999999999999888777655554   5777666654 66554

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.87  E-value=3.2e-21  Score=168.86  Aligned_cols=154  Identities=14%  Similarity=0.154  Sum_probs=124.6

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      ...+.+++|+|++.+|++|+.||.|++||+.++.... ....|...|.+++|+|++.++++++.|+.|++||+.++....
T Consensus       136 ~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~  215 (299)
T d1nr0a2         136 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELA  215 (299)
T ss_dssp             SSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEES
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3467899999999999999999999999998886543 344689999999999999999999999999999998763332


Q ss_pred             eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE--ec-CCC
Q psy11015        259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL--TE-PGE  335 (360)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l--~~-h~~  335 (360)
                                               ....+.+|...|++++|+|++++|++|+.||.|++||+.++.....+  .. +..
T Consensus       216 -------------------------~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~  270 (299)
T d1nr0a2         216 -------------------------HTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMS  270 (299)
T ss_dssp             -------------------------CCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTS
T ss_pred             -------------------------ccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCC
Confidence                                     24456789999999999999999999999999999999876543322  23 445


Q ss_pred             ceEEEEEcCCCCEEEcccccchh
Q psy11015        336 AIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       336 ~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      .|.+++|.++..+++++.|+.||
T Consensus       271 ~v~~~~~~~~~~l~s~s~D~~i~  293 (299)
T d1nr0a2         271 SVNSVIWLNETTIVSAGQDSNIK  293 (299)
T ss_dssp             CEEEEEEEETTEEEEEETTSCEE
T ss_pred             cEEEEEECCCCEEEEEeCCCEEE
Confidence            67777776655555566677776

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=4e-21  Score=175.64  Aligned_cols=157  Identities=15%  Similarity=0.135  Sum_probs=124.7

Q ss_pred             CCCCEEEEEECCC-----CCEEEEEeCCCcEEEEECCCCe---------------E---EEEEeCCCcCeEEEEEeeCCC
Q psy11015        179 HRDGVWDVAVRPG-----QPVLGSASADRTVRLWSTQTGK---------------C---VLQYSGHSGSVNSVRFLPNKD  235 (360)
Q Consensus       179 h~~~V~~l~~~~~-----~~~l~sgs~Dg~v~iwd~~~~~---------------~---~~~~~~h~~~v~~i~~~p~~~  235 (360)
                      +...++.++|.++     +.++++++.||++++|++....               .   ......+...+.+++|+|++ 
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-  196 (393)
T d1sq9a_         118 KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-  196 (393)
T ss_dssp             GGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-
T ss_pred             CCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-
Confidence            5667888888765     3589999999999999974210               1   11112455678999999988 


Q ss_pred             EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCc
Q psy11015        236 LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV  315 (360)
Q Consensus       236 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~  315 (360)
                      +|++|+.|++|++||+.++.....                      ......+.+|..+|++++|+|+|++|++|+.|++
T Consensus       197 ~lasgs~Dg~i~iwd~~~~~~~~~----------------------~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t  254 (393)
T d1sq9a_         197 LIATGFNNGTVQISELSTLRPLYN----------------------FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS  254 (393)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEEE----------------------EECCC---CCCCCEEEEEECSSTTEEEEEEEETT
T ss_pred             EEEEEeCCCcEEEEeecccccccc----------------------cccccccccccceEEEcccccccceeeeecCCCC
Confidence            889999999999999998765432                      1234567789999999999999999999999875


Q ss_pred             ---EEEEECCCCeEEEEEe-------------cCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        316 ---ANLFDVETGTILQSLT-------------EPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       316 ---i~iwd~~~~~~~~~l~-------------~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                         |++||+.+++++..+.             +|.+.|++++|+|+|++|+|++ |+.||
T Consensus       255 ~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~  314 (393)
T d1sq9a_         255 FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR  314 (393)
T ss_dssp             EEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred             cceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEE
Confidence               9999999999888874             7999999999999999999887 56655

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.7e-20  Score=161.85  Aligned_cols=158  Identities=20%  Similarity=0.362  Sum_probs=131.1

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH  247 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~  247 (360)
                      .....+..+.+|...+.++.++  +..+++|+.||+|++||++.++++..+.+|...+.++.++  +++|++|+.|++|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~s~d~~i~  240 (342)
T d2ovrb2         165 ETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVK  240 (342)
T ss_dssp             GGTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred             ccceeeEEEcCcccccccccCC--CCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEEEEcCCCEEE
Confidence            4556778899999888877765  6799999999999999999999999999999999988875  56999999999999


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL  327 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~  327 (360)
                      +||+........                         ......|...+.++++  +++++++|+.||+|++||+++++.+
T Consensus       241 iwd~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i  293 (342)
T d2ovrb2         241 IWDIKTGQCLQT-------------------------LQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFI  293 (342)
T ss_dssp             EEETTTCCEEEE-------------------------ECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             EEeccccccccc-------------------------ccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCCEE
Confidence            999876532211                         2222346677777777  4679999999999999999999999


Q ss_pred             EEEe-----cCCCceEEEEEcCCCCEEEcccccc
Q psy11015        328 QSLT-----EPGEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       328 ~~l~-----~h~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      +.+.     +|...|++++|+|++.++|++...+
T Consensus       294 ~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dG  327 (342)
T d2ovrb2         294 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG  327 (342)
T ss_dssp             EEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred             EEEecccCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence            8874     4677899999999999999987543

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.4e-19  Score=156.22  Aligned_cols=87  Identities=22%  Similarity=0.421  Sum_probs=75.9

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      +.+....+|...|+|++|  ++++|+||+.||+|+|||+.+++++..+.+|.+.|.+++|  ++++|++|+.|++|++|+
T Consensus         6 ~~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~   81 (293)
T d1p22a2           6 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD   81 (293)
T ss_dssp             CCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred             EEEeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccc
Confidence            445666788999999776  5889999999999999999999999999999999999987  678999999999999999


Q ss_pred             cccCeeEeeeC
Q psy11015        251 AVINWECLVSN  261 (360)
Q Consensus       251 ~~~~~~~~~~~  261 (360)
                      +..+.......
T Consensus        82 ~~~~~~~~~~~   92 (293)
T d1p22a2          82 VNTGEMLNTLI   92 (293)
T ss_dssp             SSSCCEEEEEC
T ss_pred             ccccccccccc
Confidence            98876554433

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=4e-20  Score=161.36  Aligned_cols=125  Identities=26%  Similarity=0.455  Sum_probs=115.4

Q ss_pred             cceeeeeeeecCCCCEEEEEECCCC--------------------CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEE
Q psy11015        168 LSCYKIRSFSGHRDGVWDVAVRPGQ--------------------PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS  227 (360)
Q Consensus       168 ~~~~~~~~l~~h~~~V~~l~~~~~~--------------------~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~  227 (360)
                      .....+..+.+|...|.+++|+|++                    ..+++|+.|+.|++||+.+++++..+.+|...|.+
T Consensus       173 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~  252 (317)
T d1vyhc1         173 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG  252 (317)
T ss_dssp             TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred             ccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEE
Confidence            4566788899999999999998764                    46999999999999999999999999999999999


Q ss_pred             EEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE
Q psy11015        228 VRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV  307 (360)
Q Consensus       228 i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l  307 (360)
                      ++|+|++++|++|+.||+|++||+.++                            .++..+.+|.+.|++++|+|++++|
T Consensus       253 ~~~~~~~~~l~s~~~dg~i~iwd~~~~----------------------------~~~~~~~~h~~~V~~~~~s~~~~~l  304 (317)
T d1vyhc1         253 VLFHSGGKFILSCADDKTLRVWDYKNK----------------------------RCMKTLNAHEHFVTSLDFHKTAPYV  304 (317)
T ss_dssp             EEECSSSSCEEEEETTTEEEEECCTTS----------------------------CCCEEEECCSSCEEEEEECSSSSCE
T ss_pred             EEECCCCCEEEEEECCCeEEEEECCCC----------------------------cEEEEEcCCCCCEEEEEEcCCCCEE
Confidence            999999999999999999999998766                            4677889999999999999999999


Q ss_pred             EEEECCCcEEEEE
Q psy11015        308 ITASWDRVANLFD  320 (360)
Q Consensus       308 ~tgs~dg~i~iwd  320 (360)
                      +||+.||+|+|||
T Consensus       305 ~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         305 VTGSVDQTVKVWE  317 (317)
T ss_dssp             EEEETTSEEEEEC
T ss_pred             EEEeCCCeEEEeC
Confidence            9999999999997

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=8.9e-21  Score=168.47  Aligned_cols=158  Identities=18%  Similarity=0.305  Sum_probs=130.5

Q ss_pred             ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      ..++..+..+.++...+.++.|+|++..+++++.|++|++||+.++.++..+.+|.+.|.+++|+  ++++++|+.||+|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i  265 (355)
T d1nexb2         188 VAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSI  265 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC--SSEEEEECTTSEE
T ss_pred             cccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccccc--cceeeeeeccccc
Confidence            34667788889999999999999999999999999999999999999999999999999999985  5699999999999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEE-EEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA-DWLSDGEQVITASWDRVANLFDVETGT  325 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i-~~sp~g~~l~tgs~dg~i~iwd~~~~~  325 (360)
                      ++||+.++                              ...+..|...+.++ .+++++.++++|+ ||.|++||+++|+
T Consensus       266 ~iwd~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~  314 (355)
T d1nexb2         266 RGWDANDY------------------------------SRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK  314 (355)
T ss_dssp             EEEETTTC------------------------------CEEEEEECTTCCCCCEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred             cccccccc------------------------------ceecccccCCceEEEEEcCCCCEEEEEe-CCEEEEEECCCCC
Confidence            99998765                              23344565555555 4566777766665 8999999999999


Q ss_pred             EEE-EEecCCCceEEEEEcCCCCEEEcccccch
Q psy11015        326 ILQ-SLTEPGEAIRAAAGRTGGPIRASPLLLAI  357 (360)
Q Consensus       326 ~~~-~l~~h~~~v~~~~~~~~g~~las~~~~~i  357 (360)
                      ++. .+.+|..+|++++|+|+..+++.+.|+.+
T Consensus       315 ~~~~~~~~~~~~V~~v~~~~~~~~~~~s~dg~~  347 (355)
T d1nexb2         315 LVHANILKDADQIWSVNFKGKTLVAAVEKDGQS  347 (355)
T ss_dssp             BCCSCTTTTCSEEEEEEEETTEEEEEEESSSCE
T ss_pred             EEEEEecCCCCCEEEEEEcCCeEEEEEECCCcE
Confidence            885 46779999999999987644444556653

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=3.2e-19  Score=161.42  Aligned_cols=119  Identities=32%  Similarity=0.476  Sum_probs=103.6

Q ss_pred             eecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe------------EEEEEeCCCcCeEEEEEeeCCCEEEEEeCC
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK------------CVLQYSGHSGSVNSVRFLPNKDLVLSASGD  243 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~------------~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d  243 (360)
                      ..+|.+.|++++|+|++.+|++|+.||.|++||+.++.            +......|...|.+++|+|++++|++|+.|
T Consensus       250 ~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~d  329 (388)
T d1erja_         250 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD  329 (388)
T ss_dssp             -CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT
T ss_pred             ccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCC
Confidence            45799999999999999999999999999999997543            345566799999999999999999999999


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE------cCCCCEEEEEECCCcEE
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW------LSDGEQVITASWDRVAN  317 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~------sp~g~~l~tgs~dg~i~  317 (360)
                      |+|++||+.++                            .++..+.+|.+.|.++++      +|++.+|+||+.||+|+
T Consensus       330 g~i~vwd~~~~----------------------------~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~  381 (388)
T d1erja_         330 RGVLFWDKKSG----------------------------NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKAR  381 (388)
T ss_dssp             SEEEEEETTTC----------------------------CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEE
T ss_pred             CEEEEEECCCC----------------------------cEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEE
Confidence            99999999876                            457788999999999985      57899999999999999


Q ss_pred             EEECC
Q psy11015        318 LFDVE  322 (360)
Q Consensus       318 iwd~~  322 (360)
                      ||+++
T Consensus       382 iW~~~  386 (388)
T d1erja_         382 IWKYK  386 (388)
T ss_dssp             EEEEE
T ss_pred             EEeee
Confidence            99974

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=2e-18  Score=150.03  Aligned_cols=117  Identities=16%  Similarity=0.288  Sum_probs=102.5

Q ss_pred             ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeC----------CCEEEEEeCCCc
Q psy11015        177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPN----------KDLVLSASGDKS  245 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~----------~~~l~s~s~d~~  245 (360)
                      ..|.+.|++++|+|++.+|++|+.||.|++||+.++.... .+.+|.+.|.+++|+|.          +.++++|+.|++
T Consensus       159 ~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~  238 (287)
T d1pgua2         159 TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN  238 (287)
T ss_dssp             SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC
T ss_pred             eccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCe
Confidence            4588899999999999999999999999999999987654 46789999999999874          468999999999


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      |++||+.++.                           ..+..+.+|...|++++|+|++ .|+|++.||+|++|++
T Consensus       239 i~iw~~~~~~---------------------------~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         239 IFIYSVKRPM---------------------------KIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             EEEEESSCTT---------------------------CCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             EEEEECCCCC---------------------------eEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence            9999987541                           2456677899999999999986 6899999999999985

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.78  E-value=3.1e-18  Score=152.86  Aligned_cols=160  Identities=11%  Similarity=0.053  Sum_probs=129.4

Q ss_pred             eecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE
Q psy11015        163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA  240 (360)
Q Consensus       163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~  240 (360)
                      +.++...+..++ + +|.+.|.+++|+|+|+.|++++.+.  .|++||+.++... .+..|.+.|.+++|+|+|++|+++
T Consensus        27 ~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~  103 (360)
T d1k32a3          27 FIQDVSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVA  103 (360)
T ss_dssp             EEECTTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEE
T ss_pred             EEEECCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-EeeCCCceEEeeeeccccccccee
Confidence            333444454444 3 7999999999999999888877654  7999999887654 567799999999999999999999


Q ss_pred             eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE---------
Q psy11015        241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS---------  311 (360)
Q Consensus       241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs---------  311 (360)
                      +.++.+++|++.++                            .....+..|...+.+++|+|+|++|+.++         
T Consensus       104 ~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~  155 (360)
T d1k32a3         104 NDRFEIMTVDLETG----------------------------KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG  155 (360)
T ss_dssp             ETTSEEEEEETTTC----------------------------CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred             cccccccccccccc----------------------------ceeeeeecccccccchhhccceeeeeeeccccccceee
Confidence            99999999999876                            23455677888899999999999998654         


Q ss_pred             -CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        312 -WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       312 -~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                       .++.+++||+.+++... +..+...+..++|+|+|+.+++++.
T Consensus       156 ~~~~~~~v~d~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~s~  198 (360)
T d1k32a3         156 YVMQAIHVYDMEGRKIFA-ATTENSHDYAPAFDADSKNLYYLSY  198 (360)
T ss_dssp             CCEEEEEEEETTTTEEEE-CSCSSSBEEEEEECTTSCEEEEEES
T ss_pred             ccccceeeeccccCceee-ecccccccccccccCCCCEEEEEeC
Confidence             34569999999887654 4456778899999999998887653

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.77  E-value=2.7e-18  Score=153.20  Aligned_cols=137  Identities=11%  Similarity=0.000  Sum_probs=120.7

Q ss_pred             EEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--cEEEEEcccCeeEeeeC
Q psy11015        185 DVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWECLVSN  261 (360)
Q Consensus       185 ~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i~vwd~~~~~~~~~~~  261 (360)
                      .-.||| ||+++++++. |.|++||+..+..++.  +|.+.|.+++|+|||+.|++++.+.  .|++||+.++       
T Consensus         7 ~~~fSP~dG~~~a~~~~-g~v~v~d~~~~~~~~~--~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~-------   76 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSR-GQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG-------   76 (360)
T ss_dssp             EEEEEECGGGCEEEEET-TEEEEECTTSSBEEEC--SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC-------
T ss_pred             cccccCCCCCEEEEEEC-CeEEEEECCCCcEEEc--cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCC-------
Confidence            456999 8999998874 7999999998876653  6999999999999999988776553  7999999876       


Q ss_pred             CCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEE
Q psy11015        262 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA  341 (360)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~  341 (360)
                                            ....+..|...|.+++|+|+|++|++++.++.+++|++.+++....+..|...+.+++
T Consensus        77 ----------------------~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (360)
T d1k32a3          77 ----------------------KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFT  134 (360)
T ss_dssp             ----------------------CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEE
T ss_pred             ----------------------cEEEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchh
Confidence                                  4556778999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCCEEEccc
Q psy11015        342 GRTGGPIRASPL  353 (360)
Q Consensus       342 ~~~~g~~las~~  353 (360)
                      |+|+|.+++.+.
T Consensus       135 ~spdg~~la~~~  146 (360)
T d1k32a3         135 ISDNSRFIAYGF  146 (360)
T ss_dssp             ECTTSCEEEEEE
T ss_pred             hccceeeeeeec
Confidence            999999998543

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=1.7e-18  Score=159.84  Aligned_cols=103  Identities=7%  Similarity=-0.130  Sum_probs=80.5

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEE--E---eCCCcCeE
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--Y---SGHSGSVN  226 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~--~---~~h~~~v~  226 (360)
                      .....+..+.+|+  ..+++.+.++..|. .+..++|+|||+++++++.|++|++||+.++++...  +   .+|.+.+.
T Consensus        36 V~~~~dg~v~vwD--~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~  112 (426)
T d1hzua2          36 VTLRDAGQIALVD--GDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVES  112 (426)
T ss_dssp             EEETTTTEEEEEE--TTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEE
T ss_pred             EEEcCCCEEEEEE--CCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEE
Confidence            4455556666654  56788899999885 589999999999999999999999999998864433  2   25666778


Q ss_pred             EEEEeeCCCEEEE-EeCCCcEEEEEcccCeeE
Q psy11015        227 SVRFLPNKDLVLS-ASGDKSVHIWQAVINWEC  257 (360)
Q Consensus       227 ~i~~~p~~~~l~s-~s~d~~i~vwd~~~~~~~  257 (360)
                      +++|+|||+++++ +..++++++||..++...
T Consensus       113 s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~  144 (426)
T d1hzua2         113 SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK  144 (426)
T ss_dssp             CCSTTCTTTEEEEEEEESSEEEEEETTTCCEE
T ss_pred             eeeecCCCCEEEEeecCCCeEEEEcCCcccee
Confidence            8888999998754 558899999998876443

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.9e-16  Score=134.08  Aligned_cols=198  Identities=20%  Similarity=0.249  Sum_probs=127.7

Q ss_pred             eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015        151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF  230 (360)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~  230 (360)
                      .+.|..++.+.+|+.  .++++++++.+|.+.|++++|+  +++|+||+.||.|++|++..+........+....  ..+
T Consensus        28 l~sgs~Dg~i~vWd~--~~~~~~~~l~~H~~~V~~v~~~--~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~--~~~  101 (293)
T d1p22a2          28 IVSGLRDNTIKIWDK--NTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHL  101 (293)
T ss_dssp             EEEEESSSCEEEEES--SSCCEEEEECCCSSCEEEEECC--SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCE--EEE
T ss_pred             EEEEeCCCeEEEEEC--CCCcEEEEEecCCCCEeeeecc--cceeeccccccccccccccccccccccccccccc--ccc
Confidence            445666666666654  5678899999999999999885  6699999999999999998876655554333222  223


Q ss_pred             eeCCCEEEEEeCCCcEEEEEcccCe---eEeeeCCCCCCCCCC-------CCCCCCC-----ccccccceeEeeCCCCcE
Q psy11015        231 LPNKDLVLSASGDKSVHIWQAVINW---ECLVSNNDNDSDLDE-------SKEPDES-----SITLRTPVKELLGHSNVV  295 (360)
Q Consensus       231 ~p~~~~l~s~s~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~~~~~h~~~v  295 (360)
                      .+....++++..++.+.+|+.....   .......+.......       .....+.     ......++..+.+|...|
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v  181 (293)
T d1p22a2         102 RFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI  181 (293)
T ss_dssp             ECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred             cccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCceeeecCCCCcEEEEEccccccc
Confidence            3344455556666666666554321   111111110000000       0000000     111234567788888888


Q ss_pred             EEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015        296 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR  358 (360)
Q Consensus       296 ~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir  358 (360)
                      ..+.++  +.++++|+.||.|++||++++..+..+.+|...+..+  .+++.+++++. |+.||
T Consensus       182 ~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~dg~i~  241 (293)
T d1p22a2         182 ACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI--RFDNKRIVSGAYDGKIK  241 (293)
T ss_dssp             EEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE--ECCSSEEEEEETTSCEE
T ss_pred             ccccCC--CCeEEEecCCCEEEEEecccceeeeeecccceeeeec--cccceEEEEEcCCCEEE
Confidence            888774  6799999999999999999999999999998888764  45566666554 55543

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.67  E-value=1.3e-15  Score=140.56  Aligned_cols=182  Identities=8%  Similarity=-0.126  Sum_probs=132.2

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEEE---eCCCcCeE
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQY---SGHSGSVN  226 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~--~~~~---~~h~~~v~  226 (360)
                      ........+.+|+  ..+++++.++..|. .+..++|+|||+++++++.|++|++||+.+++.  +..+   .+|.+.+.
T Consensus        36 v~~~d~g~v~v~D--~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~  112 (432)
T d1qksa2          36 VTLRDAGQIALID--GSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIET  112 (432)
T ss_dssp             EEETTTTEEEEEE--TTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEE
T ss_pred             EEEcCCCEEEEEE--CCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEE
Confidence            4455555555554  56788888998874 699999999999999999999999999988753  3333   35666677


Q ss_pred             EEEEeeCCCEE-EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC
Q psy11015        227 SVRFLPNKDLV-LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE  305 (360)
Q Consensus       227 ~i~~~p~~~~l-~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~  305 (360)
                      +..|+|||+++ ++++.++++++||..++............                 .......+.+...++.++|+|.
T Consensus       113 s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~v~~s~dg~  175 (432)
T d1qksa2         113 SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT-----------------YDEQEYHPEPRVAAILASHYRP  175 (432)
T ss_dssp             CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC-----------------TTTCCEESCCCEEEEEECSSSS
T ss_pred             ecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCcc-----------------ccceeccCCCceeEEEECCCCC
Confidence            77888999975 77888999999999988554432111000                 0001112456677899999998


Q ss_pred             EE-EEEECCCcEEEEECCCCeEEEEEe-cCCCceEEEEEcCCCCEEEccc
Q psy11015        306 QV-ITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       306 ~l-~tgs~dg~i~iwd~~~~~~~~~l~-~h~~~v~~~~~~~~g~~las~~  353 (360)
                      .+ ++.+.++.+.+||..+++...... .+...+.+++|+|+|++++.+.
T Consensus       176 ~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~  225 (432)
T d1qksa2         176 EFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAA  225 (432)
T ss_dssp             EEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEE
T ss_pred             EEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEec
Confidence            76 556678999999998877654333 3556789999999999776655

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.61  E-value=3.2e-15  Score=137.86  Aligned_cols=133  Identities=11%  Similarity=-0.025  Sum_probs=107.5

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCC
Q psy11015        194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKE  273 (360)
Q Consensus       194 ~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  273 (360)
                      ++++.+.||+|.|||..+++++..+..| ..+..++|+|||+++++++.|+++.+||+.++.....              
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~--------------   98 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--------------   98 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--------------
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEE--------------
Confidence            5689999999999999999999999876 4699999999999999999999999999987632211              


Q ss_pred             CCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEECCCcEEEEECCCCeEEEEEecC-----------CCceEEEE
Q psy11015        274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANLFDVETGTILQSLTEP-----------GEAIRAAA  341 (360)
Q Consensus       274 ~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs~dg~i~iwd~~~~~~~~~l~~h-----------~~~v~~~~  341 (360)
                               ..+....+|.+.+.+.+|+|||++| ++++.++++++||..+++.+..+..|           .....+++
T Consensus        99 ---------~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  169 (432)
T d1qksa2          99 ---------AEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAIL  169 (432)
T ss_dssp             ---------EEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEE
T ss_pred             ---------EEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEE
Confidence                     1122333566677778889999986 77888999999999999998887654           34556788


Q ss_pred             EcCCCCEEE
Q psy11015        342 GRTGGPIRA  350 (360)
Q Consensus       342 ~~~~g~~la  350 (360)
                      ++|+|..++
T Consensus       170 ~s~dg~~~~  178 (432)
T d1qksa2         170 ASHYRPEFI  178 (432)
T ss_dssp             ECSSSSEEE
T ss_pred             ECCCCCEEE
Confidence            899887654

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.60  E-value=1.2e-15  Score=140.27  Aligned_cols=133  Identities=15%  Similarity=0.058  Sum_probs=104.6

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCC
Q psy11015        194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKE  273 (360)
Q Consensus       194 ~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~  273 (360)
                      ++++++.||+|+|||+.+++.+..+..|. .+..++|+|||+++++++.|+++++||+.++.....              
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~--------------   98 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV--------------   98 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE--------------
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEE--------------
Confidence            67889999999999999999999999764 699999999999999999999999999987743211              


Q ss_pred             CCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE-EECCCcEEEEECCCCeEEEEEecCCCc-----------eEEEE
Q psy11015        274 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT-ASWDRVANLFDVETGTILQSLTEPGEA-----------IRAAA  341 (360)
Q Consensus       274 ~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t-gs~dg~i~iwd~~~~~~~~~l~~h~~~-----------v~~~~  341 (360)
                               ..+....+|.+.+.+++|+|||+++++ +..++.+++||..++.++..+..|...           ...++
T Consensus        99 ---------~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  169 (426)
T d1hzua2          99 ---------AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII  169 (426)
T ss_dssp             ---------EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred             ---------EEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEE
Confidence                     112233456677888899999998754 557899999999999988887765443           34555


Q ss_pred             EcCCCCEEE
Q psy11015        342 GRTGGPIRA  350 (360)
Q Consensus       342 ~~~~g~~la  350 (360)
                      +++++..+.
T Consensus       170 ~s~d~~~~~  178 (426)
T d1hzua2         170 ASHEHPEFI  178 (426)
T ss_dssp             ECSSSSEEE
T ss_pred             ECCCCCEEE
Confidence            666665444

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.54  E-value=7.8e-13  Score=115.86  Aligned_cols=199  Identities=10%  Similarity=0.023  Sum_probs=131.4

Q ss_pred             ecCCeEEEeeecCccceeeeeeeec--CCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCCCc-----Ce
Q psy11015        154 VQTSKIVSSFKTSLLSCYKIRSFSG--HRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSG-----SV  225 (360)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~--h~~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h~~-----~v  225 (360)
                      +..+.-+.+|+.  .++..+.++..  +...+.+++|+|||+++ ++++.++.|.+||+.+++.+..+..+..     .+
T Consensus         7 ~~~d~~v~v~D~--~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~   84 (337)
T d1pbyb_           7 PARPDKLVVIDT--EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSL   84 (337)
T ss_dssp             EETTTEEEEEET--TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred             EcCCCEEEEEEC--CCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccce
Confidence            333444444544  45677777765  34567899999999976 5678899999999999999988876543     34


Q ss_pred             EEEEEeeCCCEEEEEe------------CCCcEEEEEcccCeeEeeeCCCCCCCCCC-----------------------
Q psy11015        226 NSVRFLPNKDLVLSAS------------GDKSVHIWQAVINWECLVSNNDNDSDLDE-----------------------  270 (360)
Q Consensus       226 ~~i~~~p~~~~l~s~s------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~-----------------------  270 (360)
                      ..++|+|+++++++++            .+..+.+||..++................                       
T Consensus        85 ~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~  164 (337)
T d1pbyb_          85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAG  164 (337)
T ss_dssp             TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTT
T ss_pred             eeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCCcceeeeecC
Confidence            5789999999888775            45678888877765433322111000000                       


Q ss_pred             ---------------CCCC----------CCCcc----------------------------cccc-ceeEeeCCCCcEE
Q psy11015        271 ---------------SKEP----------DESSI----------------------------TLRT-PVKELLGHSNVVI  296 (360)
Q Consensus       271 ---------------~~~~----------~~~~~----------------------------~~~~-~~~~~~~h~~~v~  296 (360)
                                     ...+          .....                            .... ....+..+...+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (337)
T d1pbyb_         165 TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYF  244 (337)
T ss_dssp             EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEE
T ss_pred             cEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceE
Confidence                           0000          00000                            0000 1112334556677


Q ss_pred             EEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015        297 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI  357 (360)
Q Consensus       297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i  357 (360)
                      .++++|++.+++.+  ++.+++||+.+++.+..+. +...+.+++|+|+|.+++++. ++.|
T Consensus       245 ~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i  303 (337)
T d1pbyb_         245 STAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDL  303 (337)
T ss_dssp             EEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEE
T ss_pred             EEEecccceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcE
Confidence            88889999888766  4899999999999998886 566789999999999876654 4444

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.51  E-value=5.4e-14  Score=122.87  Aligned_cols=116  Identities=14%  Similarity=0.155  Sum_probs=88.8

Q ss_pred             eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC
Q psy11015        213 KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS  292 (360)
Q Consensus       213 ~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  292 (360)
                      +.+...++|...|++|+|+|++++|++||.||+|+|||+..+....                         .+....+|.
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~-------------------------~~~~~~~h~   56 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV-------------------------DLLQSLRYK   56 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE-------------------------EEEEEEECS
T ss_pred             CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcce-------------------------EEEEecCCC
Confidence            3456678999999999999999999999999999999987652221                         233444799


Q ss_pred             CcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeEEEEEecCCC-ceEEEEEcCCCCEEEccc
Q psy11015        293 NVVIAADWLSDG-EQVITASWDRVANLFDVETGTILQSLTEPGE-AIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       293 ~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~-~v~~~~~~~~g~~las~~  353 (360)
                      .+|.+++|+|++ .+|++|+.||.|++|++..+........+.. ......+.+++..++++.
T Consensus        57 ~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (342)
T d1yfqa_          57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAAS  119 (342)
T ss_dssp             SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEE
T ss_pred             CCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccccccccc
Confidence            999999999864 5789999999999999998877666655433 334445555666555544

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.49  E-value=4.2e-13  Score=118.05  Aligned_cols=73  Identities=4%  Similarity=-0.030  Sum_probs=63.0

Q ss_pred             EEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCCEE-EEEeCCCcEEEEEcccCeeEe
Q psy11015        186 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWECL  258 (360)
Q Consensus       186 l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~~~~~~  258 (360)
                      ++|++++++|++++.|++|.+||+.+++.+.++. .|...+.+++|+|||+++ ++++.++.|.+||+.++....
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~   76 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF   76 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeee
Confidence            4789999999999999999999999999999887 456678899999999987 556678999999998775543

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.48  E-value=5.8e-12  Score=108.53  Aligned_cols=164  Identities=12%  Similarity=0.135  Sum_probs=125.8

Q ss_pred             CCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC
Q psy11015        156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK  234 (360)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~  234 (360)
                      .+..+.+|+  ..+++.++++... +.+..++|+|+|++| ++++.++.|++||+.+++.+..+..|. .+..+.|++++
T Consensus        10 ~~~~v~v~D--~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~~~~   85 (301)
T d1l0qa2          10 ESDNISVID--VTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDG   85 (301)
T ss_dssp             TTTEEEEEE--TTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTS
T ss_pred             CCCEEEEEE--CCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-ccccccccccc
Confidence            344455554  3456777777654 457899999999976 577789999999999999999998765 56899999999


Q ss_pred             CEEE-EEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE-EEEC
Q psy11015        235 DLVL-SASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASW  312 (360)
Q Consensus       235 ~~l~-s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~-tgs~  312 (360)
                      ..++ ++..++.+.+|+..++.                            ....+. +...+..++|+|+|..++ +++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~  136 (301)
T d1l0qa2          86 KQVYVTNMASSTLSVIDTTSNT----------------------------VAGTVK-TGKSPLGLALSPDGKKLYVTNNG  136 (301)
T ss_dssp             SEEEEEETTTTEEEEEETTTTE----------------------------EEEEEE-CSSSEEEEEECTTSSEEEEEETT
T ss_pred             ccccccccccceeeecccccce----------------------------eeeecc-ccccceEEEeecCCCeeeeeecc
Confidence            8655 55667889999987762                            233343 345678899999999875 5556


Q ss_pred             CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015        313 DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       313 dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~  353 (360)
                      ++.+.+|+..++..+..+..+ ..+..++++|++..++.+.
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  176 (301)
T d1l0qa2         137 DKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVAN  176 (301)
T ss_dssp             TTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEE
T ss_pred             ccceeeeeccccceeeecccC-CCceEEEeeccccceeeec
Confidence            888999999999998888755 4578899999988766554

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.48  E-value=5.5e-13  Score=116.83  Aligned_cols=132  Identities=11%  Similarity=-0.003  Sum_probs=105.8

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEEeCC--CcCeEEEEEeeCCCEE-EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCC
Q psy11015        193 PVLGSASADRTVRLWSTQTGKCVLQYSGH--SGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWECLVSNNDNDSDLD  269 (360)
Q Consensus       193 ~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h--~~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~  269 (360)
                      +++++++.|++|+|||+.+++.+..+..+  ...+.+++|+|||+++ ++++.++.|.+||+.+++....          
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~----------   71 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR----------   71 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE----------
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEE----------
Confidence            48999999999999999999999988653  4567899999999987 5667899999999998754432          


Q ss_pred             CCCCCCCCccccccceeEeeCC-----CCcEEEEEEcCCCCEEEEEE------------CCCcEEEEECCCCeEEEEEec
Q psy11015        270 ESKEPDESSITLRTPVKELLGH-----SNVVIAADWLSDGEQVITAS------------WDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~i~~sp~g~~l~tgs------------~dg~i~iwd~~~~~~~~~l~~  332 (360)
                                        +..+     ...+..++|+|+++++++++            .++.+.+||..++.....+..
T Consensus        72 ------------------~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  133 (337)
T d1pbyb_          72 ------------------IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA  133 (337)
T ss_dssp             ------------------EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC
T ss_pred             ------------------EecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc
Confidence                              2222     22344689999999998776            467899999999999888875


Q ss_pred             CCCceEEEEEcCCCCEEEccc
Q psy11015        333 PGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       333 h~~~v~~~~~~~~g~~las~~  353 (360)
                      + ..+.+++|+|+|.+++++.
T Consensus       134 ~-~~~~~~~~s~dg~~l~~~~  153 (337)
T d1pbyb_         134 P-RQITMLAWARDGSKLYGLG  153 (337)
T ss_dssp             C-SSCCCEEECTTSSCEEEES
T ss_pred             c-CCceEEEEcCCCCEEEEEc
Confidence            4 5678899999998777654

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.43  E-value=2.5e-11  Score=104.36  Aligned_cols=188  Identities=12%  Similarity=0.059  Sum_probs=129.5

Q ss_pred             CccceeeeeeeecCCCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCC
Q psy11015        166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD  243 (360)
Q Consensus       166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d  243 (360)
                      +..++..++++..|.. +..++|++++.. ++++..++.+.+|+..+++....+.. ...+.++.|+|++..++ ++..+
T Consensus        60 d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~  137 (301)
T d1l0qa2          60 DTATNNVIATVPAGSS-PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGD  137 (301)
T ss_dssp             ETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTT
T ss_pred             ECCCCceeeeeecccc-ccccccccccccccccccccceeeecccccceeeeeccc-cccceEEEeecCCCeeeeeeccc
Confidence            3456778888888764 688999999884 55566778999999999999888884 45778999999998765 55668


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCC---------CCCc-----cccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEP---------DESS-----ITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-----~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      +.+.+|+..++....................         ....     .........+ .+...+..++|++++..++.
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~v  216 (301)
T d1l0qa2         138 KTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV-KVEAAPSGIAVNPEGTKAYV  216 (301)
T ss_dssp             TEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ECSSEEEEEEECTTSSEEEE
T ss_pred             cceeeeeccccceeeecccCCCceEEEeeccccceeeecccccccccccccceeeeecc-cccCCcceeecccccccccc
Confidence            8899999988876655433321111000000         0000     0011122222 23456778999999998876


Q ss_pred             EEC---CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEE-Eccc-ccch
Q psy11015        310 ASW---DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIR-ASPL-LLAI  357 (360)
Q Consensus       310 gs~---dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~l-as~~-~~~i  357 (360)
                      ++.   ++.|.+||..+++.+..+..+ ..+.+++|+|+|+++ +++. ++.|
T Consensus       217 ~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i  268 (301)
T d1l0qa2         217 TNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTV  268 (301)
T ss_dssp             EEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred             ccccceeeeeeeeecCCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeE
Confidence            543   468999999999999888754 468999999999865 4544 4444

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=2.1e-12  Score=113.11  Aligned_cols=135  Identities=13%  Similarity=0.123  Sum_probs=98.8

Q ss_pred             EEEEEeCCCcEEEEECCCCe---EEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCC
Q psy11015        194 VLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLD  269 (360)
Q Consensus       194 ~l~sgs~Dg~v~iwd~~~~~---~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~  269 (360)
                      .+++++.|++|++|++....   .+..+ .|.+.+.+++|+|||++|++++ .|+.|.+|++..+....           
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~-~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~-----------   73 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-----------   73 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE-----------
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEE-cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcE-----------
Confidence            56888899999999997543   33333 4888999999999999886555 58999999987542211           


Q ss_pred             CCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECCCCeEEEE--EecCCCceEEEEEcCCC
Q psy11015        270 ESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQS--LTEPGEAIRAAAGRTGG  346 (360)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~~~~~~~~--l~~h~~~v~~~~~~~~g  346 (360)
                                    .......+...+..++|+|+|++|++++. ++.+.+|+.........  ...+...+.+++++|++
T Consensus        74 --------------~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~  139 (333)
T d1ri6a_          74 --------------TFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN  139 (333)
T ss_dssp             --------------EEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTS
T ss_pred             --------------EEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecc
Confidence                          01111223445678999999999998885 67899998876654433  34566778899999999


Q ss_pred             CEEEcccc
Q psy11015        347 PIRASPLL  354 (360)
Q Consensus       347 ~~las~~~  354 (360)
                      ++++.+..
T Consensus       140 ~~~~~~~~  147 (333)
T d1ri6a_         140 RTLWVPAL  147 (333)
T ss_dssp             SEEEEEEG
T ss_pred             eeeecccc
Confidence            98776653

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.38  E-value=5.3e-11  Score=106.10  Aligned_cols=182  Identities=12%  Similarity=-0.030  Sum_probs=118.6

Q ss_pred             EeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeC----------
Q psy11015        161 SSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSG----------  220 (360)
Q Consensus       161 ~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~----------  220 (360)
                      .+|.++..+++.+.++.++...  .++|+|||.+|++++          .++.|.+||..+++.+..+..          
T Consensus        48 ~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~  125 (373)
T d2madh_          48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP  125 (373)
T ss_pred             eEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEecc
Confidence            3455667788888888877655  789999999988875          467899999998876543321          


Q ss_pred             -------------------------------------CCcCeEEEEEeeCCCE-EEEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015        221 -------------------------------------HSGSVNSVRFLPNKDL-VLSASGDKSVHIWQAVINWECLVSNN  262 (360)
Q Consensus       221 -------------------------------------h~~~v~~i~~~p~~~~-l~s~s~d~~i~vwd~~~~~~~~~~~~  262 (360)
                                                           +...+.++.|+|+|.. +++.+.|+++.+|+...+........
T Consensus       126 ~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~  205 (373)
T d2madh_         126 YSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVG  205 (373)
T ss_pred             CCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEee
Confidence                                                 1123445667777754 46788899999998765543322111


Q ss_pred             CCCCC-------------CC-C-CCC----------------------------------CC---------CC-------
Q psy11015        263 DNDSD-------------LD-E-SKE----------------------------------PD---------ES-------  277 (360)
Q Consensus       263 ~~~~~-------------~~-~-~~~----------------------------------~~---------~~-------  277 (360)
                      .....             .. . ...                                  +.         ..       
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  285 (373)
T d2madh_         206 AMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLT  285 (373)
T ss_pred             eccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEec
Confidence            00000             00 0 000                                  00         00       


Q ss_pred             ------------------ccccccceeEeeCCCCcEEEEEEcCCCCE--EEEEECCCcEEEEECCCCeEEEEEecCCCce
Q psy11015        278 ------------------SITLRTPVKELLGHSNVVIAADWLSDGEQ--VITASWDRVANLFDVETGTILQSLTEPGEAI  337 (360)
Q Consensus       278 ------------------~~~~~~~~~~~~~h~~~v~~i~~sp~g~~--l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v  337 (360)
                                        .......+..+ .+...+.+++|+|||+.  +++++.|++|++||+.+++.+.++..+....
T Consensus       286 ~~~~~~~~~~~~~~v~~~d~~t~~~~~~~-~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P  364 (373)
T d2madh_         286 SEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGP  364 (373)
T ss_pred             CCCceEEeecCCCeEEEEECCCCcEEEEe-cCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCC
Confidence                              00001112222 34567889999999984  4688999999999999999999999888888


Q ss_pred             EEEEEcCC
Q psy11015        338 RAAAGRTG  345 (360)
Q Consensus       338 ~~~~~~~~  345 (360)
                      +.+++.++
T Consensus       365 ~~l~~~~~  372 (373)
T d2madh_         365 QVLSVMNE  372 (373)
T ss_pred             cEEEEecC
Confidence            88887654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=2e-11  Score=106.72  Aligned_cols=175  Identities=13%  Similarity=0.095  Sum_probs=121.2

Q ss_pred             eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEEE---eCCCcCeEE
Q psy11015        152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKCVLQY---SGHSGSVNS  227 (360)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sg-s~Dg~v~iwd~~~~~~~~~~---~~h~~~v~~  227 (360)
                      ..+..+..+.+|.........+.....|.+.|.+|+|+|||++|+++ ..|+.|++|++........+   ..+...+..
T Consensus         8 v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~   87 (333)
T d1ri6a_           8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTH   87 (333)
T ss_dssp             EEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSE
T ss_pred             EECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceE
Confidence            34555666677776544433333344678999999999999988554 55899999999765432222   224456788


Q ss_pred             EEEeeCCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCE
Q psy11015        228 VRFLPNKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ  306 (360)
Q Consensus       228 i~~~p~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~  306 (360)
                      ++|+|+|+++++++. ++.+.+|+.......                          .......+...+.++.++|++++
T Consensus        88 l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~v~~s~d~~~  141 (333)
T d1ri6a_          88 ISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV--------------------------GVVDVVEGLDGCHSANISPDNRT  141 (333)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEEETTEEE--------------------------EEEEEECCCTTBCCCEECTTSSE
T ss_pred             EEEcCCCCEEeecccCCCceeeeccccccce--------------------------ecccccCCCccceEEEeeeccee
Confidence            999999999988875 678999987655222                          12334456677888999999999


Q ss_pred             EEEEECC-CcEEEEECCCCeEEEE------EecCCCceEEEEEcCCCCEEEcc
Q psy11015        307 VITASWD-RVANLFDVETGTILQS------LTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       307 l~tgs~d-g~i~iwd~~~~~~~~~------l~~h~~~v~~~~~~~~g~~las~  352 (360)
                      +++++.+ ..+.+|+.........      ...+......++|++++.++...
T Consensus       142 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~  194 (333)
T d1ri6a_         142 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV  194 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEE
T ss_pred             eeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEee
Confidence            8887754 5699999875432211      12344567889999999877644

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.27  E-value=8.5e-11  Score=102.89  Aligned_cols=46  Identities=11%  Similarity=0.169  Sum_probs=40.8

Q ss_pred             CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc
Q psy11015        291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA  336 (360)
Q Consensus       291 h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~  336 (360)
                      +...+.+++|+|||+++++|+.||.|++||..+++.+.++..+.+.
T Consensus       290 ~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g~  335 (346)
T d1jmxb_         290 LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGD  335 (346)
T ss_dssp             CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSSC
T ss_pred             CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCCC
Confidence            3456889999999999999999999999999999999999866543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.23  E-value=7.9e-11  Score=104.01  Aligned_cols=93  Identities=11%  Similarity=-0.059  Sum_probs=70.2

Q ss_pred             eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEE----------eCCCcEEEEECCCCeEEEEEeCCCc-------C
Q psy11015        162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA----------SADRTVRLWSTQTGKCVLQYSGHSG-------S  224 (360)
Q Consensus       162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sg----------s~Dg~v~iwd~~~~~~~~~~~~h~~-------~  224 (360)
                      +|.++..+++.+.++..+..+  .++|+|||+.|+.+          +.|+.|++||..+++.+..+..+..       .
T Consensus        30 v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~  107 (355)
T d2bbkh_          30 QFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTY  107 (355)
T ss_dssp             EEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred             EEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCC
Confidence            455566778888888876555  69999999977654          4578999999999998887754332       2


Q ss_pred             eEEEEEeeCCCEEEEEe--CCCcEEEEEcccCee
Q psy11015        225 VNSVRFLPNKDLVLSAS--GDKSVHIWQAVINWE  256 (360)
Q Consensus       225 v~~i~~~p~~~~l~s~s--~d~~i~vwd~~~~~~  256 (360)
                      ...++|+|+++.++.++  .+..+.+|+..++..
T Consensus       108 ~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~  141 (355)
T d2bbkh_         108 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF  141 (355)
T ss_dssp             GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred             CceEEEecCCCeeEEecCCCCceeeeeecCCCcE
Confidence            35689999999887765  456788999877653

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.21  E-value=3.4e-11  Score=111.33  Aligned_cols=137  Identities=11%  Similarity=0.036  Sum_probs=106.9

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC-----CCcCeEEEEEeeCCCEEEEEeC---------CCcEEEEE
Q psy11015        185 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG-----HSGSVNSVRFLPNKDLVLSASG---------DKSVHIWQ  250 (360)
Q Consensus       185 ~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-----h~~~v~~i~~~p~~~~l~s~s~---------d~~i~vwd  250 (360)
                      .+.|.+++.++..  .|+.+.+||+.+++....+..     |...|.++.|+|||++|+.++.         ++.+.+||
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            4678888876653  578899999999987766654     4577999999999999988753         46788999


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  330 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l  330 (360)
                      +.++                             .+..+..|...+..+.|||||+++|... ++.+.+|+..++...+..
T Consensus        99 ~~~~-----------------------------~~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t  148 (470)
T d2bgra1          99 LNKR-----------------------------QLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRIT  148 (470)
T ss_dssp             TTTT-----------------------------EECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC
T ss_pred             CCCC-----------------------------cccccccCCccccccccccCcceeeEee-cccceEEECCCCceeeee
Confidence            9877                             3445667888999999999999999865 678999999988765543


Q ss_pred             ecC------------------CCceEEEEEcCCCCEEEccc
Q psy11015        331 TEP------------------GEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       331 ~~h------------------~~~v~~~~~~~~g~~las~~  353 (360)
                      ..+                  .+...++.|+|+|+.+|...
T Consensus       149 ~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~  189 (470)
T d2bgra1         149 WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ  189 (470)
T ss_dssp             SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred             eccCCCcccccccceeeeeeecCCccccEECCCCCccceeE
Confidence            221                  12345688999999998765

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.17  E-value=7.6e-10  Score=98.36  Aligned_cols=178  Identities=10%  Similarity=-0.071  Sum_probs=117.3

Q ss_pred             ecCCCCEEEEEECCCCCEEEEE-----eCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------
Q psy11015        177 SGHRDGVWDVAVRPGQPVLGSA-----SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------  241 (360)
Q Consensus       177 ~~h~~~V~~l~~~~~~~~l~sg-----s~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------  241 (360)
                      .+|.+++.+++++|++..++..     +.++.|.+||..+++.+..+.++...  .++|+|||+++++++          
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~   94 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGK   94 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccc
Confidence            3688899999999999977654     33467999999999999998866543  799999999998875          


Q ss_pred             CCCcEEEEEcccCeeEeeeCCCCCCCCCC-------CCCCCCCcc--c----------cccceeEeeCCCCcEEEEEEcC
Q psy11015        242 GDKSVHIWQAVINWECLVSNNDNDSDLDE-------SKEPDESSI--T----------LRTPVKELLGHSNVVIAADWLS  302 (360)
Q Consensus       242 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--~----------~~~~~~~~~~h~~~v~~i~~sp  302 (360)
                      .++.|.+||..++................       ...+.....  .          ..........+...+.++.|+|
T Consensus        95 ~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  174 (373)
T d2madh_          95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHP  174 (373)
T ss_pred             cceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEeccceeEEEec
Confidence            35789999999987765544332211110       000000000  0          0001111223344567888999


Q ss_pred             CCCEE-EEEECCCcEEEEECCCCeEEEEEecC------CCceEEEEEcCCCCEEEcccccc
Q psy11015        303 DGEQV-ITASWDRVANLFDVETGTILQSLTEP------GEAIRAAAGRTGGPIRASPLLLA  356 (360)
Q Consensus       303 ~g~~l-~tgs~dg~i~iwd~~~~~~~~~l~~h------~~~v~~~~~~~~g~~las~~~~~  356 (360)
                      +|+.+ ++.+.||.+.+|+..++........+      ......+.+++++.+++.+.++.
T Consensus       175 ~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (373)
T d2madh_         175 GAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGK  235 (373)
T ss_pred             CCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCce
Confidence            98765 68889999999999988776655432      12234456677777776665543

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.02  E-value=1.4e-08  Score=90.20  Aligned_cols=99  Identities=8%  Similarity=-0.080  Sum_probs=75.9

Q ss_pred             EEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCCCc------
Q psy11015        160 VSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGHSG------  223 (360)
Q Consensus       160 ~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h~~------  223 (360)
                      ..+|..+..++..+.++.++...  .++|+|+|..|+.++          .|++|++||..+++++..+..+..      
T Consensus        46 ~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g  123 (368)
T d1mdah_          46 TENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG  123 (368)
T ss_dssp             EEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred             ceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceeccc
Confidence            34455566777888888887765  588999999777654          478899999999999888764332      


Q ss_pred             -CeEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeee
Q psy11015        224 -SVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       224 -~v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~  260 (360)
                       ....++|+|||++++.+. .++.+.+||+.++......
T Consensus       124 ~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~  162 (368)
T d1mdah_         124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLT  162 (368)
T ss_dssp             CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEE
T ss_pred             CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEe
Confidence             234689999999888776 5789999999988665543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.96  E-value=3.5e-09  Score=93.10  Aligned_cols=144  Identities=10%  Similarity=0.041  Sum_probs=100.5

Q ss_pred             EEEECCCCCEEEEE-----eCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE----------eCCCcEEEE
Q psy11015        185 DVAVRPGQPVLGSA-----SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA----------SGDKSVHIW  249 (360)
Q Consensus       185 ~l~~~~~~~~l~sg-----s~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~----------s~d~~i~vw  249 (360)
                      -.+.+|++..++..     +.+++|.+||..+++.+..+..+..+  .++|+|||++|++.          +.|+.|++|
T Consensus         6 ~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~   83 (355)
T d2bbkh_           6 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVF   83 (355)
T ss_dssp             CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             eEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEE
Confidence            34568999977665     34668999999999999998765444  79999999988754          347899999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEE
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTIL  327 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~  327 (360)
                      |+.++..........                     ............++|+|+|++++.++.  +..+.+|+..+++.+
T Consensus        84 D~~t~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~  142 (355)
T d2bbkh_          84 DPVTLLPTADIELPD---------------------APRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK  142 (355)
T ss_dssp             CTTTCCEEEEEEETT---------------------CCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred             ECCCCCEEEEEecCC---------------------cceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEe
Confidence            998875443211100                     000011123346789999999887754  567999999999988


Q ss_pred             EEEecCCC-------ceEEEEEcCCCCEEEc
Q psy11015        328 QSLTEPGE-------AIRAAAGRTGGPIRAS  351 (360)
Q Consensus       328 ~~l~~h~~-------~v~~~~~~~~g~~las  351 (360)
                      ..+..+..       ....++++++|..+..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v  173 (355)
T d2bbkh_         143 RMLDVPDCYHIFPTAPDTFFMHCRDGSLAKV  173 (355)
T ss_dssp             EEEECCSEEEEEEEETTEEEEEETTSCEEEE
T ss_pred             eEEecCCcceEeecCCcceEEEcCCCCEEEE
Confidence            88765432       3345678888876654

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.77  E-value=2e-08  Score=89.13  Aligned_cols=150  Identities=12%  Similarity=-0.107  Sum_probs=100.2

Q ss_pred             CCCCEEEEEECCCCCEE---EEEeCCCc--EEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------CC
Q psy11015        179 HRDGVWDVAVRPGQPVL---GSASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GD  243 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l---~sgs~Dg~--v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------~d  243 (360)
                      +.+....++..++++..   +++..+++  |.+||..+++.+..+.++...  .++|+|||+.+++++          .|
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d   95 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRT   95 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccC
Confidence            44555666667777742   23344554  667799999999988876654  589999999888754          36


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVE  322 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~  322 (360)
                      ++|.+||..++........+.                     ............++|+|||+++++++ .++.+.+||+.
T Consensus        96 ~~v~v~D~~t~~~~~~i~~p~---------------------~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~  154 (368)
T d1mdah_          96 DYVEVFDPVTFLPIADIELPD---------------------APRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVP  154 (368)
T ss_dssp             EEEEEECTTTCCEEEEEEETT---------------------SCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEET
T ss_pred             CeEEEEECCCCcEeeeecCCc---------------------cceecccCCccceEECCCCCEEEEEeCCCCeEEEEECC
Confidence            789999998874433211000                     00000111223589999999998776 47999999999


Q ss_pred             CCeEEEEEecCCC-------ceEEEEEcCCCCEEEc
Q psy11015        323 TGTILQSLTEPGE-------AIRAAAGRTGGPIRAS  351 (360)
Q Consensus       323 ~~~~~~~l~~h~~-------~v~~~~~~~~g~~las  351 (360)
                      +++.+..+..+..       ....++++++|.+++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~  190 (368)
T d1mdah_         155 GASDDQLTKSASCFHIHPGAAATHYLGSCPASLAAS  190 (368)
T ss_dssp             TTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEE
T ss_pred             CCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEE
Confidence            9999888865543       2244667777775544

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.72  E-value=1.7e-08  Score=92.83  Aligned_cols=129  Identities=9%  Similarity=0.041  Sum_probs=87.0

Q ss_pred             eeecCCCCEEEEEECCCCCEEEEEeC---------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015        175 SFSGHRDGVWDVAVRPGQPVLGSASA---------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS  245 (360)
Q Consensus       175 ~l~~h~~~V~~l~~~~~~~~l~sgs~---------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~  245 (360)
                      ++.+|...|.++.|+|||+.|+.++.         ++.+.+||+.+++. ..+..|...+..+.|+|||+.++.. .++.
T Consensus        56 ~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~  133 (470)
T d2bgra1          56 TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL-ITEERIPNNTQWVTWSPVGHKLAYV-WNND  133 (470)
T ss_dssp             TTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE-CCSSCCCTTEEEEEECSSTTCEEEE-ETTE
T ss_pred             hhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc-cccccCCccccccccccCcceeeEe-eccc
Confidence            44566788999999999999888753         56789999998874 5577889999999999999999885 5678


Q ss_pred             EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCc
Q psy11015        246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV  315 (360)
Q Consensus       246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~  315 (360)
                      +.+|+..++.............  ......+       .+.. ....+....+.|+|||++|+....|.+
T Consensus       134 l~~~~~~~g~~~~~t~~~~~~~--~~~g~~d-------~~~~-~~~~~~~~~~~wSPDGk~ia~~~~d~~  193 (470)
T d2bgra1         134 IYVKIEPNLPSYRITWTGKEDI--IYNGITD-------WVYE-EEVFSAYSALWWSPNGTFLAYAQFNDT  193 (470)
T ss_dssp             EEEESSTTSCCEECCSCCBTTT--EEESBCC-------HHHH-HHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred             ceEEECCCCceeeeeeccCCCc--ccccccc-------eeee-eeecCCccccEECCCCCccceeEecCC
Confidence            9999988775443211110000  0000000       0000 012234456789999999998876533

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.46  E-value=1.9e-05  Score=67.47  Aligned_cols=146  Identities=15%  Similarity=0.046  Sum_probs=101.8

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      .+..+++.|+|+++++...+++|..|+.. +. ...+....+.+.+++|+|+|+++++...++.+..|+........   
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~---  103 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPD-GN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV---  103 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE---
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CC-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccce---
Confidence            57889999999999999999999888865 33 23344466789999999999999998888888888765431100   


Q ss_pred             CCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec---------
Q psy11015        262 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE---------  332 (360)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~---------  332 (360)
                                           ..+.. .........+++.++|+++++.+.++.+..+|...+.....+..         
T Consensus       104 ---------------------~~~~~-~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  161 (302)
T d2p4oa1         104 ---------------------ETLLT-LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSE  161 (302)
T ss_dssp             ---------------------EEEEE-CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTT
T ss_pred             ---------------------eeccc-cCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeecc
Confidence                                 01111 12345688999999999999888899999999887754332221         


Q ss_pred             -CCCceEEEEEcCCCCEEEcccc
Q psy11015        333 -PGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       333 -h~~~v~~~~~~~~g~~las~~~  354 (360)
                       .......++++.+..+++....
T Consensus       162 ~~~~~~ngi~~~~~~l~~~~~~~  184 (302)
T d2p4oa1         162 SVFPAANGLKRFGNFLYVSNTEK  184 (302)
T ss_dssp             CCSCSEEEEEEETTEEEEEETTT
T ss_pred             CcccccccccccCCceeeecCCC
Confidence             1123456666655545544433

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.44  E-value=1.3e-05  Score=67.76  Aligned_cols=158  Identities=15%  Similarity=0.179  Sum_probs=114.8

Q ss_pred             eeeeeeee-cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015        170 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSV  246 (360)
Q Consensus       170 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~i  246 (360)
                      +.....+. .+.....++++.+++.++++....+.+.+++.. ++.+..+.  .+......+++.++++++++....+.|
T Consensus       102 g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V  180 (279)
T d1q7fa_         102 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV  180 (279)
T ss_dssp             SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred             ccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccccce
Confidence            34444443 244567889999999888888878888888854 56666653  355678899999999988888888999


Q ss_pred             EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe--eCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECCC
Q psy11015        247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVET  323 (360)
Q Consensus       247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~~  323 (360)
                      .+||....                             .+..+  .++.....++++.|+|+.+++-+. ++.|.+|+ .+
T Consensus       181 ~~~d~~G~-----------------------------~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~  230 (279)
T d1q7fa_         181 KVFNYEGQ-----------------------------YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QD  230 (279)
T ss_dssp             EEEETTCC-----------------------------EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TT
T ss_pred             eeeecCCc-----------------------------eeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CC
Confidence            99986532                             12222  134456788999999997776554 45799998 56


Q ss_pred             CeEEEEEecC--CCceEEEEEcCCCCEEEcccccchh
Q psy11015        324 GTILQSLTEP--GEAIRAAAGRTGGPIRASPLLLAIR  358 (360)
Q Consensus       324 ~~~~~~l~~h--~~~v~~~~~~~~g~~las~~~~~ir  358 (360)
                      |+.+.++...  ......+++.|+|.++++..+..||
T Consensus       231 G~~~~~~~~~~~~~~p~~vav~~dG~l~V~~~n~~v~  267 (279)
T d1q7fa_         231 GQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLY  267 (279)
T ss_dssp             SCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEE
T ss_pred             CCEEEEEeCCCCCCCEeEEEEeCCCcEEEEeCCCeEE
Confidence            8888777543  3357899999999998887666554

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.44  E-value=2.3e-05  Score=65.30  Aligned_cols=178  Identities=12%  Similarity=0.059  Sum_probs=99.0

Q ss_pred             eeeeeeecCCCCEEEEEECCCCCEEEEEeCCC---cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CCcE
Q psy11015        171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSV  246 (360)
Q Consensus       171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg---~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~~i  246 (360)
                      .-.+.+..+...+..-+|||||+.||-.....   .+.+.+...+... .+..+.+......|+|+|..++..+. ++..
T Consensus        29 ~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~  107 (269)
T d2hqsa1          29 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSL  107 (269)
T ss_dssp             CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred             CCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEeeeecccccceecCCCCeeeEeeecCCcc
Confidence            33444455567788999999999887665443   4666676666543 44457788899999999998876554 3333


Q ss_pred             EEEEc--ccCeeEeeeCCCCCCCCCCCCC---------CCCCc------cccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015        247 HIWQA--VINWECLVSNNDNDSDLDESKE---------PDESS------ITLRTPVKELLGHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       247 ~vwd~--~~~~~~~~~~~~~~~~~~~~~~---------~~~~~------~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t  309 (360)
                      .++..  ......................         .....      .........+..+........|+|+|+.++.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~  187 (269)
T d2hqsa1         108 NLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVM  187 (269)
T ss_dssp             EEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEE
T ss_pred             ceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccccceeEE
Confidence            33222  2211111100000000000000         00000      0001122233345566778899999999877


Q ss_pred             EECC-Cc--EEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEc
Q psy11015        310 ASWD-RV--ANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       310 gs~d-g~--i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las  351 (360)
                      .+.+ |.  +.+.+...+..  .+..+........|+|||+.|+-
T Consensus       188 ~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f  230 (269)
T d2hqsa1         188 VSSNGGQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIY  230 (269)
T ss_dssp             EEECSSCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEE
T ss_pred             EeecCCceeeeEeecccccc--eEeecCccccceEECCCCCEEEE
Confidence            6554 44  44445555543  33345566778899999997763

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.41  E-value=2.4e-06  Score=76.78  Aligned_cols=132  Identities=10%  Similarity=-0.006  Sum_probs=96.2

Q ss_pred             EEEEEeCCCcEEEEECCCCeEEEEEeC------------------------------CCcCeEEEEEeeCCCEEEEE-eC
Q psy11015        194 VLGSASADRTVRLWSTQTGKCVLQYSG------------------------------HSGSVNSVRFLPNKDLVLSA-SG  242 (360)
Q Consensus       194 ~l~sgs~Dg~v~iwd~~~~~~~~~~~~------------------------------h~~~v~~i~~~p~~~~l~s~-s~  242 (360)
                      .++||+.+|.|+||++.+++.++.+.-                              |........+.|||++++.. ..
T Consensus        13 ~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~   92 (441)
T d1qnia2          13 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKA   92 (441)
T ss_dssp             EEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETT
T ss_pred             EEEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCC
Confidence            477888999999999999988877531                              33445556668999988555 57


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCC--EEEEEECCC-----
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGE--QVITASWDR-----  314 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~--~l~tgs~dg-----  314 (360)
                      +.+|.+||+.+....                            ..+ ..+...+..++|+|+|+  |++.++.+.     
T Consensus        93 ~~rVavIDl~t~k~~----------------------------~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~  144 (441)
T d1qnia2          93 NTRVARIRLDIMKTD----------------------------KITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPN  144 (441)
T ss_dssp             TTEEEEEETTTTEEE----------------------------EEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSC
T ss_pred             CCEEEEEECCCCcEe----------------------------eEEecCCCCCccceEEeccCCEEEEEeccCCcccccC
Confidence            789999999877432                            222 23566789999999998  555444432     


Q ss_pred             ------------cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015        315 ------------VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL  354 (360)
Q Consensus       315 ------------~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~  354 (360)
                                  .+..+|..+.+....+... +....++|+|+|.+++.+..
T Consensus       145 dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~-~~p~~v~~spdGk~a~vt~~  195 (441)
T d1qnia2         145 DGTDFSLDNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCY  195 (441)
T ss_dssp             SSSCCCGGGEEEEEEEEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEES
T ss_pred             cccccccccccceEEeecCccceeeEEEecC-CCccceEECCCCCEEEEEec
Confidence                        2456888888887777654 45788999999998876653

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.28  E-value=5.1e-05  Score=66.68  Aligned_cols=105  Identities=10%  Similarity=0.013  Sum_probs=67.8

Q ss_pred             CeEEEEEeeCCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe--eCCCCcEEEEEE
Q psy11015        224 SVNSVRFLPNKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADW  300 (360)
Q Consensus       224 ~v~~i~~~p~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~i~~  300 (360)
                      .++++.|+|+|+++++++. ...|.+|+........                         .....  .........++|
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~-------------------------~~~~~~~~~~g~gPr~i~f  200 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE-------------------------LVGSVDAPDPGDHPRWVAM  200 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE-------------------------EEEEEECSSTTCCEEEEEE
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCcee-------------------------eccceeecCCCCceEEEEE
Confidence            3678999999998877754 4568888755331111                         11111  123457889999


Q ss_pred             cCCCCEEEEEE-CCCcEEEEECCCCeE--EEE---Ee--------------cCCCceEEEEEcCCCCEEEccc
Q psy11015        301 LSDGEQVITAS-WDRVANLFDVETGTI--LQS---LT--------------EPGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       301 sp~g~~l~tgs-~dg~i~iwd~~~~~~--~~~---l~--------------~h~~~v~~~~~~~~g~~las~~  353 (360)
                      +|+|+++++.. .+++|.+|++..+..  +..   +.              .+......++++|+|++++.+.
T Consensus       201 ~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsn  273 (365)
T d1jofa_         201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             CCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEc
Confidence            99999986555 578999999865432  221   11              1112356789999999887654

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.23  E-value=9.2e-06  Score=72.86  Aligned_cols=145  Identities=10%  Similarity=-0.024  Sum_probs=93.2

Q ss_pred             cCCCCEEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCC--EEEEEeCCCc--------
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKD--LVLSASGDKS--------  245 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sg-s~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~--~l~s~s~d~~--------  245 (360)
                      .|.-......+.|||++|+.. ..++.|.++|++++++...+. .+...+..++|+|+|+  +++..+.+..        
T Consensus        69 ~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~  148 (441)
T d1qnia2          69 CHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTD  148 (441)
T ss_dssp             BCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSC
T ss_pred             ccCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccc
Confidence            355556666678999977554 578899999999999888765 3667899999999998  4444443321        


Q ss_pred             ---------EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC----
Q psy11015        246 ---------VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW----  312 (360)
Q Consensus       246 ---------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~----  312 (360)
                               +..+|..+.....                            ++.. .+.+..++|+|+|+++++++.    
T Consensus       149 ~~~~~~~~~~~~iD~~t~~v~~----------------------------qI~v-~~~p~~v~~spdGk~a~vt~~nse~  199 (441)
T d1qnia2         149 FSLDNSYTMFTAIDAETMDVAW----------------------------QVIV-DGNLDNTDADYTGKYATSTCYNSER  199 (441)
T ss_dssp             CCGGGEEEEEEEEETTTCSEEE----------------------------EEEE-SSCCCCEEECSSSSEEEEEESCTTC
T ss_pred             cccccccceEEeecCccceeeE----------------------------EEec-CCCccceEECCCCCEEEEEecCCCc
Confidence                     2234444332211                            1111 123455666777766665543    


Q ss_pred             -------------------------------------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        313 -------------------------------------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       313 -------------------------------------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                                                           ++.+.+++......+..+..+.. ...++++|+|++++.+
T Consensus       200 ~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgks-PhGv~vSPDGkyl~~~  275 (441)
T d1qnia2         200 AVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKN-PHGLNTSPDGKYFIAN  275 (441)
T ss_dssp             CSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSS-CCCEEECTTSCEEEEE
T ss_pred             eEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCC-ccCceECCCCCEEEEe
Confidence                                                 34566666666666667765544 5779999999977544

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.19  E-value=0.00013  Score=64.01  Aligned_cols=163  Identities=12%  Similarity=0.040  Sum_probs=92.7

Q ss_pred             CCEEEEEECCCCCEEEEEeC-CCcEEEEECCC-CeE--EEEEe--CCCcCeEEEEEeeCCCEEEEE-eCCCcEEEEEccc
Q psy11015        181 DGVWDVAVRPGQPVLGSASA-DRTVRLWSTQT-GKC--VLQYS--GHSGSVNSVRFLPNKDLVLSA-SGDKSVHIWQAVI  253 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~-~~~--~~~~~--~h~~~v~~i~~~p~~~~l~s~-s~d~~i~vwd~~~  253 (360)
                      .-+.++.|+|+|+++++++. ...|.+|+... +..  .....  ......+.+.|+|+++++++. -.+++|.+|++..
T Consensus       145 ~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~  224 (365)
T d1jofa_         145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP  224 (365)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             CcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecC
Confidence            34789999999998887764 34788887653 322  22222  234568999999999987554 4688999999875


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC------CCcEEEEECCCCeEE
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW------DRVANLFDVETGTIL  327 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~------dg~i~iwd~~~~~~~  327 (360)
                      +............ ....        ...........+......+.++|+|++|+++..      .+.|..|++.....+
T Consensus       225 ~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~  295 (365)
T d1jofa_         225 ATHMPVYTHHSFP-LIPP--------GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI  295 (365)
T ss_dssp             TTCCEEEEEEEEE-SSCT--------TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE
T ss_pred             CCceEEEEeeeec-cccc--------cccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCce
Confidence            5321110000000 0000        000000001123345667899999999987643      123777776532212


Q ss_pred             E---EE---ecCCCceEEEEEcC-CCCEEEcc
Q psy11015        328 Q---SL---TEPGEAIRAAAGRT-GGPIRASP  352 (360)
Q Consensus       328 ~---~l---~~h~~~v~~~~~~~-~g~~las~  352 (360)
                      .   .+   ........+++++| +|++++.+
T Consensus       296 ~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va  327 (365)
T d1jofa_         296 EKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT  327 (365)
T ss_dssp             EEEEEEEECSSCCTTCCCEEECTTCTTEEEEE
T ss_pred             eeEeEeeEEEcCCCCccEEEecCCCCCEEEEE
Confidence            1   11   12334567799998 78866544

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.13  E-value=4.3e-05  Score=63.71  Aligned_cols=144  Identities=10%  Similarity=-0.054  Sum_probs=98.5

Q ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015        181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS  260 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~  260 (360)
                      ....++++.++++++++-.....+..++...................++++|+++++++...++.|..+|.......   
T Consensus        98 ~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~---  174 (260)
T d1rwia_          98 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV---  174 (260)
T ss_dssp             CSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEE---
T ss_pred             eecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceee---
Confidence            46789999999988877777777777776544322221122345678999999998888888888999987644111   


Q ss_pred             CCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe-cCCCceEE
Q psy11015        261 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRA  339 (360)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~-~h~~~v~~  339 (360)
                                               ......-.....+++.++|+.+++....+.|..++..... ...+. ..-....+
T Consensus       175 -------------------------~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~-~~~~~~~~~~~P~~  228 (260)
T d1rwia_         175 -------------------------VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-STVLPFTGLNTPLA  228 (260)
T ss_dssp             -------------------------ECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC-CEECCCCSCCCEEE
T ss_pred             -------------------------eeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe-EEEEccCCCCCeEE
Confidence                                     1111233456889999999888888778888888865443 22222 22245689


Q ss_pred             EEEcCCCCEEEccc
Q psy11015        340 AAGRTGGPIRASPL  353 (360)
Q Consensus       340 ~~~~~~g~~las~~  353 (360)
                      ++++++|.+.++-.
T Consensus       229 i~~d~~g~l~vad~  242 (260)
T d1rwia_         229 VAVDSDRTVYVADR  242 (260)
T ss_dssp             EEECTTCCEEEEEG
T ss_pred             EEEeCCCCEEEEEC
Confidence            99999998777643

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.12  E-value=0.0002  Score=60.88  Aligned_cols=175  Identities=7%  Similarity=-0.061  Sum_probs=105.9

Q ss_pred             eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--eEEEEE-eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~-~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      ..+....+.+.+++|+++|+++++...++.+..|+....  ...... .......+.+++.++++++++.+.++.+..+|
T Consensus        61 ~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~  140 (302)
T d2p4oa1          61 QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLID  140 (302)
T ss_dssp             EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred             EEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeee
Confidence            344556678999999999999999888888888876533  222211 22455689999999999999888889888888


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCC---C------CCCcc---cccccee-------------EeeCCCCcEEEEEEcCCCC
Q psy11015        251 AVINWECLVSNNDNDSDLDESKE---P------DESSI---TLRTPVK-------------ELLGHSNVVIAADWLSDGE  305 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~---~~~~~~~-------------~~~~h~~~v~~i~~sp~g~  305 (360)
                      ...+...................   .      .....   .....+.             ...........++|.++|+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~  220 (302)
T d2p4oa1         141 VVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN  220 (302)
T ss_dssp             TTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC
T ss_pred             ccCCcceeEecCCccceeeccCcccccccccccCCceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCC
Confidence            87765433222211100000000   0      00000   0000000             0001122345789999999


Q ss_pred             EEEEEECCCcEEEEECCCCeEEEEE--ecCCCceEEEEE---cCCCCEE
Q psy11015        306 QVITASWDRVANLFDVETGTILQSL--TEPGEAIRAAAG---RTGGPIR  349 (360)
Q Consensus       306 ~l~tgs~dg~i~iwd~~~~~~~~~l--~~h~~~v~~~~~---~~~g~~l  349 (360)
                      +.++...++.|..|+.. |+.....  ...-...++++|   .++++.|
T Consensus       221 l~va~~~~~~V~~i~p~-G~~~~~~~~~~~~~~pt~vafg~~~~D~~~L  268 (302)
T d2p4oa1         221 LYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAI  268 (302)
T ss_dssp             EEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEE
T ss_pred             EEEEEcCCCcEEEECCC-CCEEEEEecCCCCCCceEEEEcCCCCCCCEE
Confidence            88888889999999865 4433222  233456899999   6677644

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=0.00025  Score=58.59  Aligned_cols=94  Identities=15%  Similarity=0.117  Sum_probs=61.1

Q ss_pred             cCeEEEEEeeCCCEEEEEeCC-CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015        223 GSVNSVRFLPNKDLVLSASGD-KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL  301 (360)
Q Consensus       223 ~~v~~i~~~p~~~~l~s~s~d-~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s  301 (360)
                      .......|+|++..++..+.+ +...+|.....                            ........+........|+
T Consensus       171 ~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~----------------------------~~~~~~~~~~~~~~~p~~S  222 (269)
T d2hqsa1         171 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA----------------------------TGGVQVLSSTFLDETPSLA  222 (269)
T ss_dssp             SEEEEEEECTTSSEEEEEEECSSCEEEEEEETT----------------------------TCCEEECCCSSSCEEEEEC
T ss_pred             ccccccccccccceeEEEeecCCceeeeEeecc----------------------------cccceEeecCccccceEEC
Confidence            445667899999877766544 44444433321                            0112233345566778999


Q ss_pred             CCCCEEEEEEC---CCcEEEEECCCCeEEEEEecCCCceEEEEEcCC
Q psy11015        302 SDGEQVITASW---DRVANLFDVETGTILQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       302 p~g~~l~tgs~---dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~  345 (360)
                      |||++|+-.+.   ...|.+|++..+.. ..+....+.+...+|+|-
T Consensus       223 PDG~~i~f~s~~~~~~~l~~~~~dg~~~-~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         223 PNGTMVIYSSSQGMGSVLNLVSTDGRFK-ARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             TTSSEEEEEEEETTEEEEEEEETTSCCE-EECCCSSSEEEEEEECCC
T ss_pred             CCCCEEEEEEcCCCCcEEEEEECCCCCE-EEEeCCCCcEEeEEeCCC
Confidence            99999864443   34688999886654 556666778888999984

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.02  E-value=0.00022  Score=61.06  Aligned_cols=147  Identities=13%  Similarity=0.054  Sum_probs=97.3

Q ss_pred             EEEEEECCCCCEEEEEeC---------------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-----EEEEEeC
Q psy11015        183 VWDVAVRPGQPVLGSASA---------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-----LVLSASG  242 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~---------------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-----~l~s~s~  242 (360)
                      .+.+++.++|.+.+|-..               +|.|..++.+ ++...... .-...+.++|+|+++     ++++-+.
T Consensus       119 pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~~-~~~~pNGi~~~~d~d~~~~~lyv~d~~  196 (314)
T d1pjxa_         119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETP  196 (314)
T ss_dssp             CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-EESSEEEEEEEECTTSCEEEEEEEETT
T ss_pred             CcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEeeC-CcceeeeeEECCCCCcceeEEEEEeec
Confidence            578999999988777532               2344444432 44333332 334567899999875     5556677


Q ss_pred             CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      .+.|..||+.......                      .......+.+ +......+++.++|+..++....+.|.+||.
T Consensus       197 ~~~i~~~d~~~~g~~~----------------------~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp  254 (314)
T d1pjxa_         197 TKKLWSYDIKGPAKIE----------------------NKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP  254 (314)
T ss_dssp             TTEEEEEEEEETTEEE----------------------EEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             ccceEEeeccCccccc----------------------eeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeC
Confidence            8889888876432211                      0111122222 2334678999999998888888899999998


Q ss_pred             CCCeEEEEEecCCCceEEEEEcCCCC-EEEccc
Q psy11015        322 ETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL  353 (360)
Q Consensus       322 ~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~  353 (360)
                      ..+..+..+..+....++++|.|+++ +.+|.+
T Consensus       255 ~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~  287 (314)
T d1pjxa_         255 DGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH  287 (314)
T ss_dssp             TCBSCSEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred             CCCEEEEEEECCCCCEEEEEEeCCCCEEEEEEC
Confidence            88877777777767889999999986 445443

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.02  E-value=7.2e-05  Score=62.30  Aligned_cols=144  Identities=13%  Similarity=0.025  Sum_probs=97.1

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      ....+++++++.++++....+.+++++-.++..+.... ......++++.++++++++-..+..+..++........   
T Consensus        58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~---  133 (260)
T d1rwia_          58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV---  133 (260)
T ss_dssp             SCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE---
T ss_pred             CceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeeee-eeeecccccccccceeEeeccccccccccccccceeee---
Confidence            35688999999888887777777777655555443333 23567899999999888776666667666654331110   


Q ss_pred             CCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEE
Q psy11015        262 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA  341 (360)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~  341 (360)
                                              ... .......++++.|+|+.+++...++.|..+|.............-.....++
T Consensus       134 ------------------------~~~-~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~  188 (260)
T d1rwia_         134 ------------------------LPF-TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  188 (260)
T ss_dssp             ------------------------CCC-CSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEE
T ss_pred             ------------------------eee-cccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccce
Confidence                                    001 1123446789999999888888888999999775543332223445678999


Q ss_pred             EcCCCCEEEcccc
Q psy11015        342 GRTGGPIRASPLL  354 (360)
Q Consensus       342 ~~~~g~~las~~~  354 (360)
                      ++++|++.++...
T Consensus       189 ~d~~g~l~vsd~~  201 (260)
T d1rwia_         189 VDEAGTVYVTEHN  201 (260)
T ss_dssp             ECTTCCEEEEETT
T ss_pred             eeeeeeeeeeecC
Confidence            9999998876653

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=6.3e-06  Score=75.26  Aligned_cols=139  Identities=12%  Similarity=0.048  Sum_probs=91.1

Q ss_pred             EECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC---cCeEEEEEeeCCCEEEEEe---------CCCcEEEEEcccC
Q psy11015        187 AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS---GSVNSVRFLPNKDLVLSAS---------GDKSVHIWQAVIN  254 (360)
Q Consensus       187 ~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~---~~v~~i~~~p~~~~l~s~s---------~d~~i~vwd~~~~  254 (360)
                      .|.+++.++. -..+|.|.+||+.+++....+..+.   -.+....|+||+++++...         ..+.+.++|+.++
T Consensus        23 ~W~~~~~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          23 KWISDTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             CBSSSSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             EEeCCCcEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            4666665443 3557889999998886544444322   3567888999999887653         3466788888876


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec-C
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE-P  333 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~-h  333 (360)
                      ...                          ++.........+....|||+|+.+|-.. ++.|.+.+..++..++.... .
T Consensus       102 ~~~--------------------------~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~  154 (465)
T d1xfda1         102 DPQ--------------------------SLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGK  154 (465)
T ss_dssp             CCE--------------------------ECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCB
T ss_pred             cee--------------------------eccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccC
Confidence            321                          1111112234455688999999998766 57788888877765544322 1


Q ss_pred             CCc-----------------eEEEEEcCCCCEEEccc
Q psy11015        334 GEA-----------------IRAAAGRTGGPIRASPL  353 (360)
Q Consensus       334 ~~~-----------------v~~~~~~~~g~~las~~  353 (360)
                      .+.                 -.++.|+|||..||...
T Consensus       155 ~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~  191 (465)
T d1xfda1         155 EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA  191 (465)
T ss_dssp             TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred             cceeeccccchhhhhhhccccceEEECCCCCeEEEEE
Confidence            111                 25778999999988654

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.90  E-value=0.0015  Score=55.79  Aligned_cols=142  Identities=9%  Similarity=0.034  Sum_probs=90.5

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC--CcEEEEEcccCeeE
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD--KSVHIWQAVINWEC  257 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d--~~i~vwd~~~~~~~  257 (360)
                      ...+..++|.++|++.++-...+.|..|+..++.....+....+....++|+++|+++++...+  ....++.+....  
T Consensus        39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~--  116 (319)
T d2dg1a1          39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG--  116 (319)
T ss_dssp             CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS--
T ss_pred             CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCC--
Confidence            3455789999999988888889999999988776666665566778999999999988776543  233344332210  


Q ss_pred             eeeCCCCCCCCCCCCCCCCCccccccceeEeeCC---CCcEEEEEEcCCCCEEEEEECC------CcEEEEECCCCeEEE
Q psy11015        258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGH---SNVVIAADWLSDGEQVITASWD------RVANLFDVETGTILQ  328 (360)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---~~~v~~i~~sp~g~~l~tgs~d------g~i~iwd~~~~~~~~  328 (360)
                                               ..+.....+   ......+++.|+|++.++....      +.+..++.. +..+.
T Consensus       117 -------------------------~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~d-g~~~~  170 (319)
T d2dg1a1         117 -------------------------DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD-FRTVT  170 (319)
T ss_dssp             -------------------------CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT-SCCEE
T ss_pred             -------------------------ceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecc-cceeE
Confidence                                     011111111   2346789999999877764321      235555544 33333


Q ss_pred             EEecCCCceEEEEEcCCCCEE
Q psy11015        329 SLTEPGEAIRAAAGRTGGPIR  349 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~~g~~l  349 (360)
                      .+...-...+.++|+|+++.+
T Consensus       171 ~~~~~~~~pnGia~s~dg~~l  191 (319)
T d2dg1a1         171 PIIQNISVANGIALSTDEKVL  191 (319)
T ss_dssp             EEEEEESSEEEEEECTTSSEE
T ss_pred             EEeeccceeeeeeeccccceE
Confidence            333333346789999999743

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.88  E-value=0.002  Score=54.99  Aligned_cols=147  Identities=8%  Similarity=-0.037  Sum_probs=94.5

Q ss_pred             CEEEEEECCCCCEEEEEeCC------CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEEEcccC
Q psy11015        182 GVWDVAVRPGQPVLGSASAD------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVIN  254 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~D------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~~  254 (360)
                      ....+++.++|++.++....      +.+..++...+. +..+...-...+.|+|+|+++.| ++-+..+.|..|++...
T Consensus       131 ~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~  209 (319)
T d2dg1a1         131 CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD  209 (319)
T ss_dssp             CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             CCcceeEEeccceeecccccccccCcceeEEEecccce-eEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCC
Confidence            46789999999877764332      234445544333 33332233456889999999855 55567889999987643


Q ss_pred             eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC-
Q psy11015        255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP-  333 (360)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h-  333 (360)
                      .....                    ..................+++.++|+..++....+.|.+||. .|+.+..+..+ 
T Consensus       210 g~~~~--------------------~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~  268 (319)
T d2dg1a1         210 GVTIQ--------------------PFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPG  268 (319)
T ss_dssp             SSSEE--------------------EEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTT
T ss_pred             Cceec--------------------cccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCC
Confidence            11100                    000011111122234678999999998888888999999994 79888887633 


Q ss_pred             -----CCceEEEEEcCCCCEEE
Q psy11015        334 -----GEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       334 -----~~~v~~~~~~~~g~~la  350 (360)
                           ...+++++|.+++..+.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~  290 (319)
T d2dg1a1         269 RDEGHMLRSTHPQFIPGTNQLI  290 (319)
T ss_dssp             GGGTCSCBCCEEEECTTSCEEE
T ss_pred             cCCCcCceeeeEEEeCCCCEEE
Confidence                 33578999998776443

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.75  E-value=0.00068  Score=56.70  Aligned_cols=125  Identities=17%  Similarity=0.176  Sum_probs=89.2

Q ss_pred             ceeeeeee--ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeC-C
Q psy11015        169 SCYKIRSF--SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASG-D  243 (360)
Q Consensus       169 ~~~~~~~l--~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~-d  243 (360)
                      .+..+.++  ..+......+++.++++.+++....+.|++||.. |+.+..+-  ++......|++.|+|+++++-+. +
T Consensus       143 ~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~  221 (279)
T d1q7fa_         143 NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN  221 (279)
T ss_dssp             TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred             CCceeecccccccccccceeeeccceeEEeeeccccceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCC
Confidence            34445554  3456778899999999998888989999999964 66666663  34456889999999998777554 4


Q ss_pred             CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015        244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDV  321 (360)
Q Consensus       244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~  321 (360)
                      +.|.+|+.. |.                            .+.++.  ........+++.|+|.++ +++.++.|++|..
T Consensus       222 ~~v~~f~~~-G~----------------------------~~~~~~~~~~~~~p~~vav~~dG~l~-V~~~n~~v~~fr~  271 (279)
T d1q7fa_         222 FNLTIFTQD-GQ----------------------------LISALESKVKHAQCFDVALMDDGSVV-LASKDYRLYIYRY  271 (279)
T ss_dssp             CEEEEECTT-SC----------------------------EEEEEEESSCCSCEEEEEEETTTEEE-EEETTTEEEEEEC
T ss_pred             cEEEEECCC-CC----------------------------EEEEEeCCCCCCCEeEEEEeCCCcEE-EEeCCCeEEEEEe
Confidence            568888743 31                            222222  223357889999999654 4568899999998


Q ss_pred             CCC
Q psy11015        322 ETG  324 (360)
Q Consensus       322 ~~~  324 (360)
                      ...
T Consensus       272 ~~~  274 (279)
T d1q7fa_         272 VQL  274 (279)
T ss_dssp             SCC
T ss_pred             eee
Confidence            755

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.75  E-value=0.0049  Score=51.79  Aligned_cols=148  Identities=10%  Similarity=0.047  Sum_probs=99.7

Q ss_pred             CEEEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEEEcccCee
Q psy11015        182 GVWDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWE  256 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~D----g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~~~~  256 (360)
                      .++++.+.|+|++.++....    +.-.+|.+..++......+ -...+.++|+++++.+ ++-+..+.|..+++.....
T Consensus       104 ~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~  182 (295)
T d2ghsa1         104 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG  182 (295)
T ss_dssp             EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred             cceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeec-cCCcceeeecCCCceEEEeecccceeeEeeeccccc
Confidence            57889999999876665432    3446677777765555543 3456899999999855 5556678888888653211


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA  336 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~  336 (360)
                      ...                    ........+.+..+....+++..+|++.++.-..|.|..|| ..|+.+..+.-+...
T Consensus       183 ~~~--------------------~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d-p~G~~~~~i~lP~~~  241 (295)
T d2ghsa1         183 LPT--------------------GKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD-TDGNHIARYEVPGKQ  241 (295)
T ss_dssp             CBS--------------------SCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC-TTCCEEEEEECSCSB
T ss_pred             ccc--------------------cceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec-CCCcEeeEecCCCCc
Confidence            000                    00011122334455678899999999888777788999999 568899998877778


Q ss_pred             eEEEEEc-CCCC-EEEc
Q psy11015        337 IRAAAGR-TGGP-IRAS  351 (360)
Q Consensus       337 v~~~~~~-~~g~-~las  351 (360)
                      +++++|- +++. +++|
T Consensus       242 ~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         242 TTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             EEEEEEESTTSCEEEEE
T ss_pred             eEEEEEeCCCCCEEEEE
Confidence            9999995 4543 4444

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=0.0005  Score=62.24  Aligned_cols=75  Identities=7%  Similarity=-0.076  Sum_probs=52.5

Q ss_pred             CCEEEEEECCCCCEEEEEe---------CCCcEEEEECCCCeEEEEE--eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        181 DGVWDVAVRPGQPVLGSAS---------ADRTVRLWSTQTGKCVLQY--SGHSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       181 ~~V~~l~~~~~~~~l~sgs---------~Dg~v~iwd~~~~~~~~~~--~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      -.+....|+||+++++.+.         ..+.+.++|+.++......  ....+.+....|+|+|+.+|-.. ++.+.+.
T Consensus        61 ~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~  139 (465)
T d1xfda1          61 LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYC  139 (465)
T ss_dssp             TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEE
T ss_pred             cccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEE
Confidence            3567788999999877653         3567889999988643332  22334566789999999887765 5667777


Q ss_pred             EcccCee
Q psy11015        250 QAVINWE  256 (360)
Q Consensus       250 d~~~~~~  256 (360)
                      +...+..
T Consensus       140 ~~~~~~~  146 (465)
T d1xfda1         140 AHVGKQA  146 (465)
T ss_dssp             SSSSSCC
T ss_pred             ecCCCce
Confidence            7765533

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.35  E-value=0.0028  Score=53.91  Aligned_cols=113  Identities=11%  Similarity=0.167  Sum_probs=77.6

Q ss_pred             CEEEEEECCCCC-----EEEEEeCCCcEEEEECCCCeEE------EEEeC-CCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015        182 GVWDVAVRPGQP-----VLGSASADRTVRLWSTQTGKCV------LQYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHIW  249 (360)
Q Consensus       182 ~V~~l~~~~~~~-----~l~sgs~Dg~v~iwd~~~~~~~------~~~~~-h~~~v~~i~~~p~~~~l~s~s~d~~i~vw  249 (360)
                      .-+.++|+|++.     ++++-+..+.|..|++.....+      ..+.+ +.+....+++.++|++.++....+.|.+|
T Consensus       173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~  252 (314)
T d1pjxa_         173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF  252 (314)
T ss_dssp             SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred             eeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEE
Confidence            346788888764     5555677888988887533211      12222 22345689999999988888888999999


Q ss_pred             EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEECCCcEEEEECC
Q psy11015        250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANLFDVE  322 (360)
Q Consensus       250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs~dg~i~iwd~~  322 (360)
                      |...+                            .....+......+++++|.|+++.| +|.+.+|.|.-+++.
T Consensus       253 dp~~g----------------------------~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         253 GPDGG----------------------------QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             CTTCB----------------------------SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             eCCCC----------------------------EEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            87655                            2233444455678899999999755 666677888777764

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.25  E-value=0.0018  Score=53.32  Aligned_cols=94  Identities=13%  Similarity=0.157  Sum_probs=64.0

Q ss_pred             EEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCE
Q psy11015        229 RFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ  306 (360)
Q Consensus       229 ~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~  306 (360)
                      ..+|+  |+.++-.+. +.|.+.|+..+                             ....+..+.+.+...+|||||++
T Consensus         5 ~~sPdi~G~~v~f~~~-~dl~~~d~~~g-----------------------------~~~~Lt~~~~~~~~p~~SPDG~~   54 (281)
T d1k32a2           5 LLNPDIHGDRIIFVCC-DDLWEHDLKSG-----------------------------STRKIVSNLGVINNARFFPDGRK   54 (281)
T ss_dssp             CEEEEEETTEEEEEET-TEEEEEETTTC-----------------------------CEEEEECSSSEEEEEEECTTSSE
T ss_pred             ccCCCCCCCEEEEEeC-CcEEEEECCCC-----------------------------CEEEEecCCCcccCEEECCCCCE
Confidence            35788  888776543 45777788766                             34556677788899999999999


Q ss_pred             EEEEEC-CC-----cEEEEECCCCeEEEEEe------cCCCceEEEEEcCCCCEEEcc
Q psy11015        307 VITASW-DR-----VANLFDVETGTILQSLT------EPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       307 l~tgs~-dg-----~i~iwd~~~~~~~~~l~------~h~~~v~~~~~~~~g~~las~  352 (360)
                      ||-.+. ++     .|.+++..+++......      .........+|+|+|+.++..
T Consensus        55 iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~  112 (281)
T d1k32a2          55 IAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIST  112 (281)
T ss_dssp             EEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred             EEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEE
Confidence            875432 22     37778888776543211      112345678999999987753

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.14  E-value=0.0065  Score=49.71  Aligned_cols=137  Identities=9%  Similarity=0.038  Sum_probs=79.1

Q ss_pred             ECCC--CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CC-----cEEEEEcccCeeEee
Q psy11015        188 VRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK-----SVHIWQAVINWECLV  259 (360)
Q Consensus       188 ~~~~--~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~-----~i~vwd~~~~~~~~~  259 (360)
                      .+|+  |+.++-.+ +|.|.+.|+.+++.. .+..+.+.+...+|+|||+.|+-.+. ++     .|.+++...+.....
T Consensus         6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           6 LNPDIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             EEEEEETTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             cCCCCCCCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            5677  88766554 456888899988754 56667788899999999998875432 22     355666655533211


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC------CcEEEEECCCCeEEEEEecC
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD------RVANLFDVETGTILQSLTEP  333 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d------g~i~iwd~~~~~~~~~l~~h  333 (360)
                      .                      ................+|+|+|+.++.....      ..+...+...+....   .+
T Consensus        84 t----------------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  138 (281)
T d1k32a2          84 T----------------------YFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVP---LN  138 (281)
T ss_dssp             C----------------------CCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEE---CC
T ss_pred             e----------------------ecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEE---ec
Confidence            0                      0001111222345678899999998865332      235556655554322   12


Q ss_pred             CCceEEEEEcCCCCEEEc
Q psy11015        334 GEAIRAAAGRTGGPIRAS  351 (360)
Q Consensus       334 ~~~v~~~~~~~~g~~las  351 (360)
                      ........+.+++.+++.
T Consensus       139 ~~~~~~~~~~~~~~~~~~  156 (281)
T d1k32a2         139 LGPATHILFADGRRVIGR  156 (281)
T ss_dssp             SCSCSEEEEETTEEEEEE
T ss_pred             CCccceeeecCCCeEEEe
Confidence            233334445555555553

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.84  E-value=0.068  Score=44.41  Aligned_cols=142  Identities=16%  Similarity=0.104  Sum_probs=87.6

Q ss_pred             CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC----CcCeEEEEEeeCCCEEEEEeCC----CcEEEEEc
Q psy11015        180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH----SGSVNSVRFLPNKDLVLSASGD----KSVHIWQA  251 (360)
Q Consensus       180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h----~~~v~~i~~~p~~~~l~s~s~d----~~i~vwd~  251 (360)
                      ...+.++++.+++.++++ +.+ .+.++|..+++........    ...++++.+.|+|++.++....    +.-.+|.+
T Consensus        58 ~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~  135 (295)
T d2ghsa1          58 PFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV  135 (295)
T ss_dssp             SSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred             CCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeee
Confidence            346788999888866654 444 5888999988754433211    1247899999999876664322    23456665


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE-EEECCCcEEEEECCC------C
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASWDRVANLFDVET------G  324 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~-tgs~dg~i~iwd~~~------~  324 (360)
                      ..+.                             +..+...-...+.++|+++++.++ +-+..+.|..|++..      +
T Consensus       136 ~~g~-----------------------------~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~  186 (295)
T d2ghsa1         136 AKGK-----------------------------VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG  186 (295)
T ss_dssp             ETTE-----------------------------EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS
T ss_pred             cCCc-----------------------------EEEEeeccCCcceeeecCCCceEEEeecccceeeEeeeccccccccc
Confidence            5441                             111222223467899999998764 555678888887642      1


Q ss_pred             e--EEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015        325 T--ILQSLTEPGEAIRAAAGRTGGPIRASP  352 (360)
Q Consensus       325 ~--~~~~l~~h~~~v~~~~~~~~g~~las~  352 (360)
                      +  ....+.+..+....+++..+|++-++.
T Consensus       187 ~~~~~~~~~~~~g~pdG~~vD~~GnlWva~  216 (295)
T d2ghsa1         187 KAEVFIDSTGIKGGMDGSVCDAEGHIWNAR  216 (295)
T ss_dssp             CCEEEEECTTSSSEEEEEEECTTSCEEEEE
T ss_pred             ceEEEeccCcccccccceEEcCCCCEEeee
Confidence            1  112222344556788888888765553

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=94.76  E-value=0.23  Score=42.26  Aligned_cols=118  Identities=14%  Similarity=0.102  Sum_probs=73.3

Q ss_pred             EEEEEECCCCCEEEEEeCCC-----------cEEEEECCCCeE--EEEE-eCCCcCeEEEEEeeCCCEEEEEeCC-CcEE
Q psy11015        183 VWDVAVRPGQPVLGSASADR-----------TVRLWSTQTGKC--VLQY-SGHSGSVNSVRFLPNKDLVLSASGD-KSVH  247 (360)
Q Consensus       183 V~~l~~~~~~~~l~sgs~Dg-----------~v~iwd~~~~~~--~~~~-~~h~~~v~~i~~~p~~~~l~s~s~d-~~i~  247 (360)
                      +.......++++++-|+.+.           .+.+||..++.-  .... ..|.......++.++|.+++.|+.+ ..+.
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~  101 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS  101 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCccee
Confidence            33444556777777777431           367899988742  2222 2333334466788899998888765 5799


Q ss_pred             EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC------CcEEEEEC
Q psy11015        248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD------RVANLFDV  321 (360)
Q Consensus       248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d------g~i~iwd~  321 (360)
                      +||..++.-.                          ....+... ..-.+++..++|+.++.|+.+      ..+.+||.
T Consensus       102 ~yd~~~~~w~--------------------------~~~~~~~~-r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~  154 (387)
T d1k3ia3         102 LYDSSSDSWI--------------------------PGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP  154 (387)
T ss_dssp             EEEGGGTEEE--------------------------ECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred             EecCccCccc--------------------------cccccccc-ccccceeeecCCceeeeccccccccccceeeeecC
Confidence            9998876322                          11111111 112345667799998888753      35899999


Q ss_pred             CCCeEE
Q psy11015        322 ETGTIL  327 (360)
Q Consensus       322 ~~~~~~  327 (360)
                      .+....
T Consensus       155 ~~~~W~  160 (387)
T d1k3ia3         155 SSKTWT  160 (387)
T ss_dssp             TTTEEE
T ss_pred             CCCcee
Confidence            887653

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.16  E-value=1.6  Score=38.02  Aligned_cols=55  Identities=9%  Similarity=0.113  Sum_probs=40.4

Q ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEE--Ee------CCCcCeEEEEEeeC
Q psy11015        179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--YS------GHSGSVNSVRFLPN  233 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~--~~------~h~~~v~~i~~~p~  233 (360)
                      .-..-++|+|.|+++++++--.+|.|++++..++.....  +.      .-.+....|+|+|+
T Consensus        25 ~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            345778999999999888776689999999877754322  21      12356789999995

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.08  E-value=1.1  Score=35.89  Aligned_cols=146  Identities=5%  Similarity=-0.144  Sum_probs=87.2

Q ss_pred             eecCCCCEEEEEECCCCCEEEEE-eCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEEEccc
Q psy11015        176 FSGHRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVI  253 (360)
Q Consensus       176 l~~h~~~V~~l~~~~~~~~l~sg-s~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~  253 (360)
                      +..+...+.+|+|++..+.|+-+ ..++.|+..++..+.....+......+.++++..-+..| ++-...+.|.+.++..
T Consensus        31 ~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg  110 (263)
T d1npea_          31 LHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG  110 (263)
T ss_dssp             EEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             cccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCC
Confidence            33344567889999877765554 556788888887665555554444678899998655555 4555677899988764


Q ss_pred             CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-CcEEEE--ECCCCeEEEEE
Q psy11015        254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-RVANLF--DVETGTILQSL  330 (360)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-g~i~iw--d~~~~~~~~~l  330 (360)
                      ...                            ...+...-..+..+++.|...+++-.... +..+||  ++.........
T Consensus       111 ~~~----------------------------~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~  162 (263)
T d1npea_         111 TQR----------------------------RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA  162 (263)
T ss_dssp             CSC----------------------------EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEE
T ss_pred             ceE----------------------------EEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeee
Confidence            411                            11122223567889999877777654432 233344  44432222222


Q ss_pred             ecCCCceEEEEEcCCCCEE
Q psy11015        331 TEPGEAIRAAAGRTGGPIR  349 (360)
Q Consensus       331 ~~h~~~v~~~~~~~~g~~l  349 (360)
                      ...-...+++++++.+..+
T Consensus       163 ~~~~~~P~glaiD~~~~~l  181 (263)
T d1npea_         163 QDNLGLPNGLTFDAFSSQL  181 (263)
T ss_dssp             CTTCSCEEEEEEETTTTEE
T ss_pred             eecccccceEEEeecCcEE
Confidence            2233456788887665433

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=94.06  E-value=1.5  Score=37.87  Aligned_cols=64  Identities=11%  Similarity=0.063  Sum_probs=44.4

Q ss_pred             CCCCEEEEEECC--CCCEEEEEeCCC------------------cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE
Q psy11015        179 HRDGVWDVAVRP--GQPVLGSASADR------------------TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL  238 (360)
Q Consensus       179 h~~~V~~l~~~~--~~~~l~sgs~Dg------------------~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~  238 (360)
                      ....+..++..+  .-.+++.++.+.                  .+.++|..+.+....+. -.+....+.++|+|++++
T Consensus       130 n~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~-V~g~ld~~~~s~dGK~af  208 (459)
T d1fwxa2         130 NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL-VSGNLDNCDADYEGKWAF  208 (459)
T ss_dssp             SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEEETTTTEEEEEEE-ESSCCCCEEECSSSSEEE
T ss_pred             CCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEEecCCceEEEEee-eCCChhccccCCCCCEEE
Confidence            344566666654  444787777643                  36678998888776665 345677899999999988


Q ss_pred             EEeCC
Q psy11015        239 SASGD  243 (360)
Q Consensus       239 s~s~d  243 (360)
                      +.+.+
T Consensus       209 ~TsyN  213 (459)
T d1fwxa2         209 STSYN  213 (459)
T ss_dssp             EEESC
T ss_pred             EEecc
Confidence            87654

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=93.77  E-value=0.78  Score=39.64  Aligned_cols=59  Identities=14%  Similarity=0.093  Sum_probs=38.5

Q ss_pred             EEEECC---CCCEEEEEe-CCCcEEEEECCCCeEEEEEeC-CCcCeEEEEEeeCC--CEEEEEeCC
Q psy11015        185 DVAVRP---GQPVLGSAS-ADRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNK--DLVLSASGD  243 (360)
Q Consensus       185 ~l~~~~---~~~~l~sgs-~Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~~~p~~--~~l~s~s~d  243 (360)
                      .+++..   ||++++... .++.|-+-|+++.++.+...- ....+..+...+++  .+++.++.+
T Consensus        89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~  154 (459)
T d1fwxa2          89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGED  154 (459)
T ss_dssp             EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECS
T ss_pred             cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCcc
Confidence            445443   788666654 678899999999988665432 34456777765543  467666653

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.75  E-value=0.45  Score=41.45  Aligned_cols=59  Identities=8%  Similarity=0.059  Sum_probs=38.8

Q ss_pred             CEEEEEECCCCCEEEEE-eCCC----cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe
Q psy11015        182 GVWDVAVRPGQPVLGSA-SADR----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS  241 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sg-s~Dg----~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s  241 (360)
                      .+..++++|++++++.+ +.+|    +++++|+.+|+.+..--. ......+.|.+++..|+-..
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~-~~~~~~~~W~~D~~~~~Y~~  189 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNA  189 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEE
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc-cccccceEEcCCCCEEEEEE
Confidence            34456789999976643 3333    699999999986542211 11224688999998776543

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.56  E-value=0.81  Score=39.04  Aligned_cols=140  Identities=8%  Similarity=-0.079  Sum_probs=79.6

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN  261 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~  261 (360)
                      .|..++|+.+  .|+.. .++.+..++...-........-..++.++.++|.  .++....++.+.++++..+.....  
T Consensus        88 ~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~--  160 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL--  160 (381)
T ss_dssp             TEEEEEEETT--EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE--
T ss_pred             CeEEEEeeCC--EEEEE-eCCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccc--
Confidence            5888999855  44443 4556777887664433443334566888888764  567777888899998876632111  


Q ss_pred             CCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEE-ECCCCeEEEEEecCCCceEEE
Q psy11015        262 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF-DVETGTILQSLTEPGEAIRAA  340 (360)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iw-d~~~~~~~~~l~~h~~~v~~~  340 (360)
                                          ...+..+. -.+.+.+++|++.|.+++++..++ ..+- ++.....+..-......|.++
T Consensus       161 --------------------~~~v~~~~-~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~~~v~sI  218 (381)
T d1xipa_         161 --------------------AQNVTSFD-VTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSV  218 (381)
T ss_dssp             --------------------EESEEEEE-ECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEE
T ss_pred             --------------------cCCcceEE-ecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCCCcCCCcceeEE
Confidence                                00011111 135688899998888888874332 2111 111100000000123467788


Q ss_pred             EEcCCCCEEE
Q psy11015        341 AGRTGGPIRA  350 (360)
Q Consensus       341 ~~~~~g~~la  350 (360)
                      .|-.+..+++
T Consensus       219 ~WL~~~~F~v  228 (381)
T d1xipa_         219 TILSPQDFLA  228 (381)
T ss_dssp             EESSSSEEEE
T ss_pred             EEecCceEEE
Confidence            8887766665

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=93.28  E-value=0.59  Score=42.29  Aligned_cols=48  Identities=13%  Similarity=0.139  Sum_probs=33.7

Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc-eEEEEEcCCCC-EEE
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTEPGEA-IRAAAGRTGGP-IRA  350 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~-v~~~~~~~~g~-~la  350 (360)
                      .|.++++|+.||.++-+|..+|+.+-++...... -.-+.+..+|+ +++
T Consensus       468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~  517 (560)
T d1kv9a2         468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVA  517 (560)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            4678888999999999999999999888643211 11244555664 544

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=93.11  E-value=0.73  Score=41.78  Aligned_cols=48  Identities=15%  Similarity=0.127  Sum_probs=33.7

Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCce-EEEEEcCCCC-EEE
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTEPGEAI-RAAAGRTGGP-IRA  350 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v-~~~~~~~~g~-~la  350 (360)
                      .|..+++|+.||.++.+|..+|+.+-++.-..... .-+.|..+|+ +++
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv~  536 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS  536 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            57788899999999999999999998886432111 1134545665 443

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.36  E-value=0.56  Score=42.60  Aligned_cols=49  Identities=20%  Similarity=0.142  Sum_probs=34.3

Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEecCCC-ceEEEEEcCCCC-EEEc
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTEPGE-AIRAAAGRTGGP-IRAS  351 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~-~v~~~~~~~~g~-~las  351 (360)
                      .+..+++|+.||.++-+|.++|+.+-++.-... .-.-+.|..+|+ +++.
T Consensus       474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi~v  524 (571)
T d2ad6a1         474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGS  524 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEEEEEE
Confidence            466888899999999999999999988764321 112245555675 5543

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.28  E-value=0.35  Score=44.08  Aligned_cols=48  Identities=19%  Similarity=0.189  Sum_probs=35.0

Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc-eEEEEEcCCCC-EEE
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTEPGEA-IRAAAGRTGGP-IRA  350 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~-v~~~~~~~~g~-~la  350 (360)
                      .|..+++|+.||.++-+|..||+.+-+++-.... -.-+.+..+|+ +++
T Consensus       496 agglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv~  545 (582)
T d1flga_         496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG  545 (582)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             cCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            5778888999999999999999999888743221 11255666774 554

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.62  E-value=2.6  Score=33.61  Aligned_cols=136  Identities=11%  Similarity=-0.092  Sum_probs=81.5

Q ss_pred             CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC--CcEEEEEcccCee
Q psy11015        180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD--KSVHIWQAVINWE  256 (360)
Q Consensus       180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d--~~i~vwd~~~~~~  256 (360)
                      ...+.++++.+.+. +..+-...+.|.+.++........+.........++++|...+++-....  +.|.-.++...  
T Consensus        76 ~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs--  153 (266)
T d1ijqa1          76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--  153 (266)
T ss_dssp             CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--
T ss_pred             CCCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCC--
Confidence            34567888887555 44445566789999998766656666566778999999865555443332  33433333221  


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECCCCeEEEEEecC-
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLTEP-  333 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~~~~~~~~l~~h-  333 (360)
                                                 ....+. ..-....++++.+.++.|+-+ ...+.|...++........+... 
T Consensus       154 ---------------------------~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~  206 (266)
T d1ijqa1         154 ---------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK  206 (266)
T ss_dssp             ---------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT
T ss_pred             ---------------------------ceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCC
Confidence                                       122222 223456789998877776655 45678888888654333323222 


Q ss_pred             -CCceEEEEEcC
Q psy11015        334 -GEAIRAAAGRT  344 (360)
Q Consensus       334 -~~~v~~~~~~~  344 (360)
                       -....++++..
T Consensus       207 ~~~~p~~lav~~  218 (266)
T d1ijqa1         207 RLAHPFSLAVFE  218 (266)
T ss_dssp             TTSSEEEEEEET
T ss_pred             cccccEEEEEEC
Confidence             23456677663

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.25  E-value=3.2  Score=33.88  Aligned_cols=154  Identities=18%  Similarity=0.192  Sum_probs=92.7

Q ss_pred             eeeeeeecCC----CCEEEEEECCCCCEEEEEe---C----CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC--C-CE
Q psy11015        171 YKIRSFSGHR----DGVWDVAVRPGQPVLGSAS---A----DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN--K-DL  236 (360)
Q Consensus       171 ~~~~~l~~h~----~~V~~l~~~~~~~~l~sgs---~----Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~--~-~~  236 (360)
                      .+.+.+.-|.    .-|-....++++++++..|   .    .|.+.+|..+.+ .-+.+.||.+....+.+.-+  . .+
T Consensus       134 ~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~l  212 (327)
T d1utca2         134 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTL  212 (327)
T ss_dssp             CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEE
T ss_pred             CchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccceeeeeEEEEcCCCCCCceE
Confidence            4566665553    3466777888888655433   2    367788988754 35667888765555444211  1 12


Q ss_pred             EEEE---eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccc-ccceeEee---CCCCcEEEEEEcCCCCEEEE
Q psy11015        237 VLSA---SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITL-RTPVKELL---GHSNVVIAADWLSDGEQVIT  309 (360)
Q Consensus       237 l~s~---s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~h~~~v~~i~~sp~g~~l~t  309 (360)
                      |+-+   ...+++++-++......                    .... .+.+..+.   .-.+-..++..++....++.
T Consensus       213 f~fa~r~~~~~kLhIiEig~~~~g--------------------~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyv  272 (327)
T d1utca2         213 FCFAVRGQAGGKLHIIEVGTPPTG--------------------NQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL  272 (327)
T ss_dssp             EEEEEEETTEEEEEEEECSCCCTT--------------------CCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred             EEEEECCCCCcEEEEEEcCCCccC--------------------CCCCcceeEEEECCccccCCcEEEEEeeccCCEEEE
Confidence            3222   22356777776542100                    0000 01111111   12345668889998889999


Q ss_pred             EECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCC
Q psy11015        310 ASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTG  345 (360)
Q Consensus       310 gs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~  345 (360)
                      -+.-|.+++||+.+|.++..-+-....|...+-+..
T Consensus       273 iTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~  308 (327)
T d1utca2         273 ITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA  308 (327)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT
T ss_pred             EecCcEEEEEEcccccEEEEeecCCCceEEeccCCC
Confidence            999999999999999999887777777775554443

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.17  E-value=4.7  Score=34.05  Aligned_cols=136  Identities=10%  Similarity=-0.019  Sum_probs=82.8

Q ss_pred             CEEEEEECCCCCEEEEEeCCCcEEEEECC-----------CCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015        182 GVWDVAVRPGQPVLGSASADRTVRLWSTQ-----------TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ  250 (360)
Q Consensus       182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~-----------~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd  250 (360)
                      ...-+++++...+++.|+.++ ++|-...           .........  -..|..++|+.+  .++.. .++.+..++
T Consensus        38 ~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~--ip~v~~vafs~d--~l~v~-~~~~l~~~~  111 (381)
T d1xipa_          38 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE--IPDVIFVCFHGD--QVLVS-TRNALYSLD  111 (381)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE--CTTEEEEEEETT--EEEEE-ESSEEEEEE
T ss_pred             ccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccC--CCCeEEEEeeCC--EEEEE-eCCCEEEEE
Confidence            455678888777888888885 4565532           111111111  235888999643  45444 445577777


Q ss_pred             cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE
Q psy11015        251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL  330 (360)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l  330 (360)
                      ...-.                            .......-..++..+.++|.  .++....+|.+.++++..+......
T Consensus       112 ~~~l~----------------------------~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~  161 (381)
T d1xipa_         112 LEELS----------------------------EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLA  161 (381)
T ss_dssp             SSSTT----------------------------CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             eeccc----------------------------cccccccccccccceecCCc--eeEEEecCCCEEEEEeccCcccccc
Confidence            65321                            11111223456778888774  5666777899999999887643322


Q ss_pred             ec-----CCCceEEEEEcCCCCEEEccc
Q psy11015        331 TE-----PGEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       331 ~~-----h~~~v~~~~~~~~g~~las~~  353 (360)
                      .+     -.+.+.+++|++.|..++++.
T Consensus       162 ~~v~~~~~~~~~~~v~ws~kgkq~v~~~  189 (381)
T d1xipa_         162 QNVTSFDVTNSQLAVLLKDRSFQSFAWR  189 (381)
T ss_dssp             ESEEEEEECSSEEEEEETTSCEEEEEEE
T ss_pred             CCcceEEecCCceEEEEeCCcEEEEEeC
Confidence            11     135689999999998777663

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.74  E-value=4.6  Score=32.00  Aligned_cols=144  Identities=6%  Similarity=-0.106  Sum_probs=85.7

Q ss_pred             CCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE-eCCCcEEEEEcccCee
Q psy11015        179 HRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKSVHIWQAVINWE  256 (360)
Q Consensus       179 h~~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~-s~d~~i~vwd~~~~~~  256 (360)
                      ....+.++++..-+..| .+-...+.|.+.++....+...+...-..+..++++|...+++-. ...+..+||.......
T Consensus        77 ~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~  156 (263)
T d1npea_          77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT  156 (263)
T ss_dssp             TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred             ccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCC
Confidence            34578899998755555 455667899999988665444444444678999999976655543 3333445664432100


Q ss_pred             EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECCCCeEEEEEecCCC
Q psy11015        257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLTEPGE  335 (360)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~~~~~~~~l~~h~~  335 (360)
                                                .........-....++++.+.++.|+-+ ...+.|...|+........+.+.. 
T Consensus       157 --------------------------~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~-  209 (263)
T d1npea_         157 --------------------------NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ-  209 (263)
T ss_dssp             --------------------------CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC-
T ss_pred             --------------------------CceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCC-
Confidence                                      0111112223456789998888877555 456788888987554433444433 


Q ss_pred             ceEEEEEcCCCCEEE
Q psy11015        336 AIRAAAGRTGGPIRA  350 (360)
Q Consensus       336 ~v~~~~~~~~g~~la  350 (360)
                      ...++++. ++.+..
T Consensus       210 ~P~~lav~-~~~lYw  223 (263)
T d1npea_         210 YPFAVTSY-GKNLYY  223 (263)
T ss_dssp             SEEEEEEE-TTEEEE
T ss_pred             CcEEEEEE-CCEEEE
Confidence            34577776 343333

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=88.70  E-value=1.2  Score=37.32  Aligned_cols=59  Identities=14%  Similarity=0.182  Sum_probs=38.2

Q ss_pred             EEEEEEcCCCCEEEEEECC-CcEEEEECCCCeEEEEEecC-CCceEEEEEcCCCCEEEccc
Q psy11015        295 VIAADWLSDGEQVITASWD-RVANLFDVETGTILQSLTEP-GEAIRAAAGRTGGPIRASPL  353 (360)
Q Consensus       295 v~~i~~sp~g~~l~tgs~d-g~i~iwd~~~~~~~~~l~~h-~~~v~~~~~~~~g~~las~~  353 (360)
                      ..+.++.++|..++.|+.+ ..+.+||..+......-... ...-.+++..++|.+++.+.
T Consensus        78 ~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG  138 (387)
T d1k3ia3          78 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGG  138 (387)
T ss_dssp             SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECC
T ss_pred             eeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCceeeecc
Confidence            3456788999999988765 57999999887664321111 11123456677888776654

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.24  E-value=9.6  Score=33.95  Aligned_cols=74  Identities=12%  Similarity=-0.038  Sum_probs=48.8

Q ss_pred             EEECCCCCEEEEEeC----------------CCcEEEEECCCCeEEEEEeCCCcCeE---------EEEEeeCCC---EE
Q psy11015        186 VAVRPGQPVLGSASA----------------DRTVRLWSTQTGKCVLQYSGHSGSVN---------SVRFLPNKD---LV  237 (360)
Q Consensus       186 l~~~~~~~~l~sgs~----------------Dg~v~iwd~~~~~~~~~~~~h~~~v~---------~i~~~p~~~---~l  237 (360)
                      .++.+....++.+..                ...+...|.++|+.+..++.+...++         ......++.   .+
T Consensus       240 ~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v  319 (571)
T d2ad6a1         240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL  319 (571)
T ss_dssp             CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred             cccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCccccccccccccceeeeeccCccccce
Confidence            456666665555443                24577789999999888875332222         222223443   46


Q ss_pred             EEEeCCCcEEEEEcccCeeEee
Q psy11015        238 LSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       238 ~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      +.++.+|.+.++|..+|+....
T Consensus       320 ~~~~k~G~l~vlDr~tG~~i~~  341 (571)
T d2ad6a1         320 SHIDRNGILYTLNRENGNLIVA  341 (571)
T ss_dssp             EEECTTSEEEEEETTTCCEEEE
T ss_pred             eeccccceEEEEecCCCcEeee
Confidence            7788999999999999987654

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=86.65  E-value=2  Score=39.01  Aligned_cols=30  Identities=23%  Similarity=0.314  Sum_probs=26.7

Q ss_pred             CCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015        303 DGEQVITASWDRVANLFDVETGTILQSLTE  332 (360)
Q Consensus       303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~  332 (360)
                      .|..++.|+.||.++-+|..+|+.+-++..
T Consensus       483 agglVF~G~~Dg~l~A~Da~TGe~LW~~~~  512 (596)
T d1w6sa_         483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKI  512 (596)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeeEEEC
Confidence            567888899999999999999999988864

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=85.07  E-value=7.5  Score=32.11  Aligned_cols=57  Identities=5%  Similarity=-0.187  Sum_probs=34.3

Q ss_pred             CcEEEEEEcCCCCEEEEEE--C-------------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEE
Q psy11015        293 NVVIAADWLSDGEQVITAS--W-------------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       293 ~~v~~i~~sp~g~~l~tgs--~-------------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~la  350 (360)
                      ...+.+++..+|.+.+|-.  .             -+...+|....+....... .-...+.++++|+++++.
T Consensus       150 ~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~~-~l~~pNGI~~s~d~~~ly  221 (340)
T d1v04a_         150 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-GFDFANGINISPDGKYVY  221 (340)
T ss_dssp             SSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEEEE-EESSEEEEEECTTSSEEE
T ss_pred             cCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEEcC-CCCccceeEECCCCCEEE
Confidence            4578888888888888731  1             1233445444444322233 234578899999987554

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.58  E-value=3.6  Score=35.31  Aligned_cols=97  Identities=11%  Similarity=0.068  Sum_probs=58.0

Q ss_pred             eEEEEEeeCCCEEEEE-eCC----CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEE
Q psy11015        225 VNSVRFLPNKDLVLSA-SGD----KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD  299 (360)
Q Consensus       225 v~~i~~~p~~~~l~s~-s~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~  299 (360)
                      +..++++|++++++-+ +.+    ..++++|+.++.....                           .+..  .....++
T Consensus       127 ~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~---------------------------~i~~--~~~~~~~  177 (430)
T d1qfma1         127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD---------------------------VLER--VKFSCMA  177 (430)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE---------------------------EEEE--ECSCCEE
T ss_pred             ecceEecCCCCEEEEEeccccCchheeEEeccCcceeccc---------------------------cccc--ccccceE
Confidence            4456778999877633 333    3689999998854321                           1111  1123578


Q ss_pred             EcCCCCEEEEEECC----------------CcEEEEECCCCeE--EEEEecC--CCceEEEEEcCCCCEEE
Q psy11015        300 WLSDGEQVITASWD----------------RVANLFDVETGTI--LQSLTEP--GEAIRAAAGRTGGPIRA  350 (360)
Q Consensus       300 ~sp~g~~l~tgs~d----------------g~i~iwd~~~~~~--~~~l~~h--~~~v~~~~~~~~g~~la  350 (360)
                      |.+++..|+-...|                ..+..|.+.+...  +..+...  ...+..+..+++|.+++
T Consensus       178 W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~  248 (430)
T d1qfma1         178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVL  248 (430)
T ss_dssp             ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEE
T ss_pred             EcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceee
Confidence            99999987644332                2477777766532  2333332  23466677888988765

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=84.47  E-value=3.3  Score=35.95  Aligned_cols=34  Identities=6%  Similarity=0.049  Sum_probs=27.3

Q ss_pred             CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015        222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW  255 (360)
Q Consensus       222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~  255 (360)
                      -...++|+|.|+|+++++--..|+|++++..++.
T Consensus        26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~   59 (450)
T d1crua_          26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGS   59 (450)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred             CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCc
Confidence            3467899999999988876567999998876653

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.44  E-value=8.1  Score=30.49  Aligned_cols=142  Identities=7%  Similarity=-0.159  Sum_probs=80.4

Q ss_pred             cCCCCEEEEEECCCCCEEEEE-eCCCcEEEEECCCC----eEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEEEc
Q psy11015        178 GHRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQA  251 (360)
Q Consensus       178 ~h~~~V~~l~~~~~~~~l~sg-s~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~  251 (360)
                      .....+.+++|++..+.|+-+ ..++.|.-.++...    .....+......+..+++.+.+..| ++-...++|.+.++
T Consensus        27 ~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~  106 (266)
T d1ijqa1          27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT  106 (266)
T ss_dssp             CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEec
Confidence            345567889999877765554 45666776666432    1122233333456788887655544 55556678999987


Q ss_pred             ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEE
Q psy11015        252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQS  329 (360)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~  329 (360)
                      .....                            ...+........++++.|...+++-...  .+.|.-.++........
T Consensus       107 ~g~~~----------------------------~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l  158 (266)
T d1ijqa1         107 KGVKR----------------------------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL  158 (266)
T ss_dssp             TSSSE----------------------------EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred             CCceE----------------------------EEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecc
Confidence            65421                            1223334456788888886666654433  34565566543333222


Q ss_pred             EecCCCceEEEEEcCCCC
Q psy11015        330 LTEPGEAIRAAAGRTGGP  347 (360)
Q Consensus       330 l~~h~~~v~~~~~~~~g~  347 (360)
                      ....-...+++++++.+.
T Consensus       159 ~~~~~~~p~gl~iD~~~~  176 (266)
T d1ijqa1         159 VTENIQWPNGITLDLLSG  176 (266)
T ss_dssp             ECSSCSCEEEEEEETTTT
T ss_pred             cccccceeeEEEeecccc
Confidence            222334567888887654

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.74  E-value=11  Score=30.63  Aligned_cols=117  Identities=15%  Similarity=0.191  Sum_probs=78.3

Q ss_pred             EECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCC
Q psy11015        187 AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDS  266 (360)
Q Consensus       187 ~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~  266 (360)
                      -.+|..+.|+.-+ ..++.|||+++...++.+. ....|.-=.|-.+ +.|+-. .+..|.-|++....           
T Consensus        69 IMhP~~~IiALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~-~~L~lV-T~taVYHW~~~g~s-----------  133 (327)
T d1utca2          69 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL-NTVALV-TDNAVYHWSMEGES-----------  133 (327)
T ss_dssp             EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCCCEEEESSS-SEEEEE-CSSEEEEEESSSSC-----------
T ss_pred             hcCCCCcEEEEec-CCeEEEEehhHhhhhceEE-cCCCcEEEEecCC-CEEEEE-cCCceEEEcccCCC-----------
Confidence            3678888887766 5589999999999999887 4556666667533 344333 34579999985331           


Q ss_pred             CCCCCCCCCCCccccccceeEeeCCC----CcEEEEEEcCCCCEEEEEE-------CCCcEEEEECCCCeEEEEEecCCC
Q psy11015        267 DLDESKEPDESSITLRTPVKELLGHS----NVVIAADWLSDGEQVITAS-------WDRVANLFDVETGTILQSLTEPGE  335 (360)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~i~~sp~g~~l~tgs-------~dg~i~iwd~~~~~~~~~l~~h~~  335 (360)
                                      .|...+..|.    ..|..-..++++++++..+       -.|.+.+|..+.+. -+.+.+|.+
T Consensus       134 ----------------~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~-sQ~ieGhaa  196 (327)
T d1utca2         134 ----------------QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA  196 (327)
T ss_dssp             ----------------CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEE
T ss_pred             ----------------CchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc-Cccccceee
Confidence                            2455555553    3577777788888875432       24779999987553 356666643

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=82.51  E-value=12  Score=31.02  Aligned_cols=138  Identities=14%  Similarity=0.211  Sum_probs=75.6

Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee----CCC--EEEEEe-CC---CcEEEEEcccCeeEee
Q psy11015        190 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP----NKD--LVLSAS-GD---KSVHIWQAVINWECLV  259 (360)
Q Consensus       190 ~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p----~~~--~l~s~s-~d---~~i~vwd~~~~~~~~~  259 (360)
                      |+..+++.....+-+.+||+. |+.+..+.  .+.++.|..-.    .+.  -++.++ .+   .+|.+|.+........
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~  114 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ  114 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEE
T ss_pred             cCccEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccc
Confidence            344577777777789999985 88777765  46677766542    222  244444 32   3577887653211110


Q ss_pred             eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE--cCC-CC-EEEEEECCCcEEEEEC---CCC----eEEE
Q psy11015        260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW--LSD-GE-QVITASWDRVANLFDV---ETG----TILQ  328 (360)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--sp~-g~-~l~tgs~dg~i~iwd~---~~~----~~~~  328 (360)
                      ...                    .+......-...+..+|+  +|. |. +++....+|.+..|.+   ..+    ..+.
T Consensus       115 ~~~--------------------~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr  174 (353)
T d1h6la_         115 SIT--------------------DPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVR  174 (353)
T ss_dssp             ECS--------------------CSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEE
T ss_pred             ccc--------------------ccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeee
Confidence            000                    000000001123556666  554 44 4566777899888865   233    3455


Q ss_pred             EEecCCCceEEEEEcCCC-CEEEc
Q psy11015        329 SLTEPGEAIRAAAGRTGG-PIRAS  351 (360)
Q Consensus       329 ~l~~h~~~v~~~~~~~~g-~~las  351 (360)
                      .+.. ...+-.|++.+.. .++++
T Consensus       175 ~f~~-~~q~EGCVvDde~~~Lyis  197 (353)
T d1h6la_         175 AFKM-NSQTEGMAADDEYGSLYIA  197 (353)
T ss_dssp             EEEC-SSCEEEEEEETTTTEEEEE
T ss_pred             ccCC-CCccceEEEeCCCCcEEEe
Confidence            5653 4567888888764 44444

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.22  E-value=1.5  Score=39.74  Aligned_cols=57  Identities=19%  Similarity=0.210  Sum_probs=42.7

Q ss_pred             CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        202 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       202 g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      |.+.-+|+.+|+.+.....+ .++..-..+..+.++++|+.|+.++-+|..+|+.+..
T Consensus       466 G~l~AiD~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~  522 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK  522 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             CeEEEEcCCCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEE
Confidence            57888899999888877633 2333222345677888999999999999999977754

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=80.39  E-value=3.2  Score=37.17  Aligned_cols=57  Identities=12%  Similarity=0.130  Sum_probs=42.3

Q ss_pred             CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015        202 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV  259 (360)
Q Consensus       202 g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~  259 (360)
                      |.+.-||+.+|+.+..+. +.....+-...-.+.++++|+.|+.++-+|..+|+.+..
T Consensus       438 G~l~A~D~~tGk~~W~~~-~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~  494 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVP-YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQ  494 (560)
T ss_dssp             EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             cceEEEeCCCCeEeeecc-CCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEE
Confidence            568889999998887765 222222223344677888999999999999999977765