Psyllid ID: psy11168


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120------
MKSITDKDSKYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQS
ccEEEEcccccEEEEEEEEEEEEEcccccccccEEEEEcccccccccccccEEEEEcccEEEEEEEcccEEEEEEEEEcccccccEEEEEEEEEcccccccEEEEEEEEccccccEEEEccccccc
EEEEEccccccEEEEEEEEEEEcEcccccccccccccEccccEEcccccccEEEEEccccEEEEEEEccEEEEEEEcccccEEEEEEEEEEEEcccccccEEEEEEEEEccccccEEEEEEcccEc
mksitdkdskytspinlDFVTYTSrkgkemsgaylflprgeaksvpvthppviiiqgpLVSMVIVELPLVTHTVLVNhvadsddlgiDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQS
mksitdkdskytspinldFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLttnienqdvfytdlngyqs
MKSITDKDSKYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQS
**************INLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLN****
*KS********TSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQ*
*********KYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQS
MKSITDKDSKYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQS
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKSITDKDSKYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query126 2.2.26 [Sep-21-2011]
P49641 1150 Alpha-mannosidase 2x OS=H yes N/A 0.992 0.108 0.380 2e-20
Q16706 1144 Alpha-mannosidase 2 OS=Ho no N/A 0.992 0.109 0.373 1e-19
Q24451 1108 Alpha-mannosidase 2 OS=Dr yes N/A 0.936 0.106 0.428 3e-18
Q8BRK9 1152 Alpha-mannosidase 2x OS=M yes N/A 0.992 0.108 0.380 7e-17
P27046 1150 Alpha-mannosidase 2 OS=Mu no N/A 0.992 0.108 0.325 4e-16
Q1ZXI8 1123 Alpha-mannosidase E OS=Di yes N/A 0.960 0.107 0.281 0.0003
>sp|P49641|MA2A2_HUMAN Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=2 SV=3 Back     alignment and function desciption
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/126 (38%), Positives = 78/126 (61%), Gaps = 1/126 (0%)

Query: 1   MKSITDKDSKYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVI-IIQGPL 59
           +KSI   D ++   +++  + Y +R  K+ SGAYLFLP GEAK      PPV+ + +GP 
Sbjct: 781 LKSIRRVDEEHEQQVDMQVLVYGTRTSKDKSGAYLFLPDGEAKPYVPKEPPVLRVTEGPF 840

Query: 60  VSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYT 119
            S V+     +   V + ++   + L +DI +L+DIR  VN E+A+ + T+I++Q +F+T
Sbjct: 841 FSEVVAYYEHIHQAVRLYNLPGVEGLSLDISSLVDIRDYVNKELALHIHTDIDSQGIFFT 900

Query: 120 DLNGYQ 125
           DLNG+Q
Sbjct: 901 DLNGFQ 906




Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 1EC: 4
>sp|Q16706|MA2A1_HUMAN Alpha-mannosidase 2 OS=Homo sapiens GN=MAN2A1 PE=1 SV=2 Back     alignment and function description
>sp|Q24451|MAN2_DROME Alpha-mannosidase 2 OS=Drosophila melanogaster GN=alpha-Man-II PE=1 SV=2 Back     alignment and function description
>sp|Q8BRK9|MA2A2_MOUSE Alpha-mannosidase 2x OS=Mus musculus GN=Man2a2 PE=2 SV=2 Back     alignment and function description
>sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2 Back     alignment and function description
>sp|Q1ZXI8|MANE_DICDI Alpha-mannosidase E OS=Dictyostelium discoideum GN=manE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query126
91086213 1133 PREDICTED: similar to mannosidase alpha 0.904 0.100 0.5 2e-25
242019146 1057 alpha-mannosidase, putative [Pediculus h 0.992 0.118 0.464 9e-25
328720998 1112 PREDICTED: alpha-mannosidase 2-like [Acy 0.976 0.110 0.440 6e-24
55742178 909 mannosidase, alpha, class 2A, member 2 [ 0.992 0.137 0.420 5e-22
348506006 1151 PREDICTED: alpha-mannosidase 2 [Oreochro 0.992 0.108 0.420 3e-21
432863595 1238 PREDICTED: alpha-mannosidase 2x-like [Or 0.992 0.100 0.396 2e-20
402914064 1172 PREDICTED: alpha-mannosidase 2x isoform 0.992 0.106 0.404 3e-20
292628067 1150 PREDICTED: alpha-mannosidase 2x-like [Da 0.992 0.108 0.404 3e-20
410907882 1151 PREDICTED: alpha-mannosidase 2x-like [Ta 0.992 0.108 0.396 3e-20
402914062 1150 PREDICTED: alpha-mannosidase 2x isoform 0.992 0.108 0.404 3e-20
>gi|91086213|ref|XP_972030.1| PREDICTED: similar to mannosidase alpha class 2a [Tribolium castaneum] gi|270009868|gb|EFA06316.1| hypothetical protein TcasGA2_TC009186 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 81/114 (71%)

Query: 12  TSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVT 71
           T P++LDF  Y  R+ +E SG YLFLP G+A  + + +  V +IQGP+VS V V+LP V 
Sbjct: 780 TVPVHLDFAKYGVRQSEERSGGYLFLPDGDAIPIQIENTIVNVIQGPIVSAVTVQLPYVR 839

Query: 72  HTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQ 125
           HTV +     +D LGI+I+N++DI +T N E+ MRL+TNI++ D FYTDLNG++
Sbjct: 840 HTVTLYSSTGADSLGIEIENIVDISKTSNFELVMRLSTNIQSSDQFYTDLNGFE 893




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242019146|ref|XP_002430026.1| alpha-mannosidase, putative [Pediculus humanus corporis] gi|212515088|gb|EEB17288.1| alpha-mannosidase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|328720998|ref|XP_001946979.2| PREDICTED: alpha-mannosidase 2-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|55742178|ref|NP_001006777.1| mannosidase, alpha, class 2A, member 2 [Xenopus (Silurana) tropicalis] gi|49523304|gb|AAH75578.1| mannosidase, alpha, class 2A, member 2 [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information
>gi|348506006|ref|XP_003440551.1| PREDICTED: alpha-mannosidase 2 [Oreochromis niloticus] Back     alignment and taxonomy information
>gi|432863595|ref|XP_004070144.1| PREDICTED: alpha-mannosidase 2x-like [Oryzias latipes] Back     alignment and taxonomy information
>gi|402914064|ref|XP_003919455.1| PREDICTED: alpha-mannosidase 2x isoform 2 [Papio anubis] Back     alignment and taxonomy information
>gi|292628067|ref|XP_002666837.1| PREDICTED: alpha-mannosidase 2x-like [Danio rerio] Back     alignment and taxonomy information
>gi|410907882|ref|XP_003967420.1| PREDICTED: alpha-mannosidase 2x-like [Takifugu rubripes] Back     alignment and taxonomy information
>gi|402914062|ref|XP_003919454.1| PREDICTED: alpha-mannosidase 2x isoform 1 [Papio anubis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query126
UNIPROTKB|E1BGJ4 1150 MAN2A2 "Uncharacterized protei 0.992 0.108 0.388 9.4e-20
UNIPROTKB|B4DEU9 658 MAN2A2 "cDNA FLJ50120, highly 0.992 0.189 0.380 1.7e-19
UNIPROTKB|H0YLB9 793 MAN2A2 "Alpha-mannosidase 2x" 0.992 0.157 0.380 2.3e-19
UNIPROTKB|P49641 1150 MAN2A2 "Alpha-mannosidase 2x" 0.992 0.108 0.380 4.1e-19
UNIPROTKB|F1RMI9 1150 MAN2A2 "Uncharacterized protei 0.992 0.108 0.396 2.3e-18
UNIPROTKB|Q16706 1144 MAN2A1 "Alpha-mannosidase 2" [ 0.984 0.108 0.385 3.7e-18
UNIPROTKB|F1RM55 1144 MAN2A1 "Uncharacterized protei 0.992 0.109 0.388 6.1e-18
UNIPROTKB|F6V049 1150 MAN2A2 "Uncharacterized protei 0.992 0.108 0.365 7.9e-18
UNIPROTKB|E2QT95 1153 MAN2A2 "Uncharacterized protei 0.992 0.108 0.365 7.9e-18
FB|FBgn0011740 1108 alpha-Man-II "alpha Mannosidas 0.936 0.106 0.428 1.2e-17
UNIPROTKB|E1BGJ4 MAN2A2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 248 (92.4 bits), Expect = 9.4e-20, P = 9.4e-20
 Identities = 49/126 (38%), Positives = 79/126 (62%)

Query:     1 MKSITDKDSKYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVI-IIQGPL 59
             +KS+   D +    ++++F+ Y +R  K+ SGAYLFLP GEAK      PPV+ + +GP 
Sbjct:   781 LKSVRRVDEEQEQRVDMEFLVYGTRSSKDKSGAYLFLPDGEAKPYVPRDPPVLRVTEGPF 840

Query:    60 VSMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYT 119
              S V+     V   V + ++   + L +D+ +L+DIR  VN E+A+R+ T+I +Q +F+T
Sbjct:   841 FSEVVACYEHVHQVVRLYNLPGVEGLSLDVSSLVDIRDYVNKELALRIRTDINSQGIFFT 900

Query:   120 DLNGYQ 125
             DLNG+Q
Sbjct:   901 DLNGFQ 906




GO:0016799 "hydrolase activity, hydrolyzing N-glycosyl compounds" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0006013 "mannose metabolic process" evidence=IEA
GO:0004559 "alpha-mannosidase activity" evidence=IEA
UNIPROTKB|B4DEU9 MAN2A2 "cDNA FLJ50120, highly similar to Homo sapiens mannosidase, alpha, class 2A, member 2 (MAN2A2), mRNA" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H0YLB9 MAN2A2 "Alpha-mannosidase 2x" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P49641 MAN2A2 "Alpha-mannosidase 2x" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RMI9 MAN2A2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q16706 MAN2A1 "Alpha-mannosidase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RM55 MAN2A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F6V049 MAN2A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2QT95 MAN2A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0011740 alpha-Man-II "alpha Mannosidase II" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query126
PLN02701 1050 PLN02701, PLN02701, alpha-mannosidase 1e-14
pfam07748 379 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa 5e-06
>gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase Back     alignment and domain information
 Score = 68.7 bits (168), Expect = 1e-14
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 13/134 (9%)

Query: 1   MKSITDKDSKYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLV 60
           ++ I    +   + +  +   Y+S+     SGAYLF P GEA+ +      V++ +GPLV
Sbjct: 660 LRKIKIHKNGSETVVGEEIGMYSSQG----SGAYLFKPDGEAQPIVQAGGLVVVSEGPLV 715

Query: 61  SMV-------IVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTV--NTEVAMRLTTNI 111
             V         + PL   T L +      DL ++ +  +++      + E+ +R  T+I
Sbjct: 716 QEVHSVPKTKWEKSPLSRSTRLYHGGKSVQDLSVEKEYHVELLGHDFNDKELIVRFKTDI 775

Query: 112 ENQDVFYTDLNGYQ 125
           +N+ VFY+DLNG+Q
Sbjct: 776 DNKRVFYSDLNGFQ 789


Length = 1050

>gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 126
KOG1959|consensus 996 99.98
PLN02701 1050 alpha-mannosidase 99.97
KOG1958|consensus 1129 99.92
PF07748 457 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t 99.32
PRK09819 875 alpha-mannosidase; Provisional 93.67
>KOG1959|consensus Back     alignment and domain information
Probab=99.98  E-value=3e-33  Score=238.10  Aligned_cols=121  Identities=28%  Similarity=0.518  Sum_probs=108.5

Q ss_pred             CeeEEecCCCcEEEEEEEEEEeecCCC---CCCceeeEEeeCCCCc-cCCCCCCcEEEEeCCcEEEEEEEcC-ceEEEEE
Q psy11168          1 MKSITDKDSKYTSPINLDFVTYTSRKG---KEMSGAYLFLPRGEAK-SVPVTHPPVIIIQGPLVSMVIVELP-LVTHTVL   75 (126)
Q Consensus         1 L~si~~~~~g~~~~v~~~f~~Y~s~~~---~~~SGAYiF~P~~~~~-~~~~~~~~~~v~~G~lv~ev~~~~~-~~~~~~r   75 (126)
                      |++|....+|.+.+|.|+|+||.+..+   +|.|||||||| +.+. |+..+..++.|+.||||.||||.++ |++|++|
T Consensus       601 l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviR  679 (996)
T KOG1959|consen  601 LKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIR  679 (996)
T ss_pred             eEEEEecccCcceeeeeeeEEEEeecCCcCCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeE
Confidence            578888889999999999999998764   47899999999 5444 4556678899999999999999998 9999999


Q ss_pred             EeecCCCCCCeEEEEEEe---eccCCCCeEEEEEEEeccccCCEEEecCCCCcC
Q psy11168         76 VNHVADSDDLGIDIQNLL---DIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQS  126 (126)
Q Consensus        76 ly~~~~~~~~~ieie~~v---~i~~~~~kE~v~r~~t~i~n~~~FyTDsNG~em  126 (126)
                      ||++.    +++|+||.|   |+.+..|||+|+||+|+|+++++||||||||||
T Consensus       680 vy~g~----~~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~  729 (996)
T KOG1959|consen  680 VYEGK----NHVEFEWLVGPIPIDDGIGKEVVTRFSTEISSNGVFYTDSNGREM  729 (996)
T ss_pred             ecCCC----cceEEEEEecceecCCCccceEEEEeccccccCceEEecCcHHHH
Confidence            99877    799999998   456889999999999999999999999999997



>PLN02701 alpha-mannosidase Back     alignment and domain information
>KOG1958|consensus Back     alignment and domain information
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK09819 alpha-mannosidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query126
1ps3_A 1045 Golgi Alpha-mannosidase Ii In Complex With Kifunens 2e-19
3cv5_A 1045 Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu 2e-19
1hxk_A 1015 Golgi Alpha-Mannosidase Ii In Complex With Deoxyman 2e-19
1qwn_A 1045 Golgi Alpha-Mannosidase Ii Covalent Intermediate Co 2e-19
1qwu_A 1045 Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit 2e-19
3dx3_A 1045 Golgi Alpha-Mannosidase Ii In Complex With Mannosta 2e-19
1hty_A 1015 Golgi Alpha-Mannosidase Ii Length = 1015 7e-19
>pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 Back     alignment and structure

Iteration: 1

Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 6/112 (5%) Query: 14 PINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHT 73 P++ F+ Y R + SGAYLFLP G A V + P V++ +G L S V V LP V H Sbjct: 707 PVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGLPSVVHQ 766 Query: 74 VLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQ 125 ++ A +I+NL+DI NTE+ MRL T+I++ D+FYTDLNG Q Sbjct: 767 TIMRGGAP------EIRNLVDIGSLDNTEIVMRLETHIDSGDIFYTDLNGLQ 812
>pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 Back     alignment and structure
>pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 Back     alignment and structure
>pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 Back     alignment and structure
>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 Back     alignment and structure
>pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 Back     alignment and structure
>pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query126
1o7d_D 282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 4e-27
3bvx_A 1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 8e-26
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 Back     alignment and structure
 Score =  100 bits (250), Expect = 4e-27
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 1   MKSITDKDSKYTSPINLDFVTYTSRKG----KEMSGAYLFLPRGEAKSVPVTHPPVIIIQ 56
           +  + + +     P+   F  Y +  G     + SGAY+F P               +++
Sbjct: 21  LMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVK 80

Query: 57  GPLVSMVIVEL-PLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQD 115
             LV  V        +  V +       +L   +   + +      EV  R  T +  + 
Sbjct: 81  ASLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTV-GPIPVGDGWGKEVISRFDTALATRG 139

Query: 116 VFYTDLNGYQ 125
           +FYTD NG +
Sbjct: 140 LFYTDSNGRE 149


>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query126
1o7d_D 282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 100.0
3bvx_A 1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 99.93
2wyh_A 923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 99.35
3lvt_A 899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 98.8
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Back     alignment and structure
Probab=100.00  E-value=1e-39  Score=252.92  Aligned_cols=122  Identities=20%  Similarity=0.348  Sum_probs=108.3

Q ss_pred             CeeEEecCCCcEEEEEEEEEEeecCCC----CCCceeeEEeeCCCCccCCCCCCcEEEEeCCcEEEEEEEcC-ceEEEEE
Q psy11168          1 MKSITDKDSKYTSPINLDFVTYTSRKG----KEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELP-LVTHTVL   75 (126)
Q Consensus         1 L~si~~~~~g~~~~v~~~f~~Y~s~~~----~~~SGAYiF~P~~~~~~~~~~~~~~~v~~G~lv~ev~~~~~-~~~~~~r   75 (126)
                      |++|+++++|..++|+|+|+||.++.+    .++||||||||++++.+.....+.+.+++|||++||++.++ |++|++|
T Consensus        21 L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G~lv~eV~~~~~~~~sq~~R  100 (282)
T 1o7d_D           21 LMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKASLVQEVHQNFSAWCSQVVR  100 (282)
T ss_dssp             EEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEECSSCEEEEEEEETTEEEEEE
T ss_pred             EEEEEEcCCCeEEEEeEEEEEEecccCCCCCCCCCceEEecCCCCCCcccCCCcEEEEEECCEEEEEEEEECCcEEEEEE
Confidence            689999999999999999999999854    46999999999998755444568899999999999999998 9999999


Q ss_pred             EeecCCCCCCeEEEEEEe---eccCCCCeEEEEEEEeccccCCEEEecCCCCcC
Q psy11168         76 VNHVADSDDLGIDIQNLL---DIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQS  126 (126)
Q Consensus        76 ly~~~~~~~~~ieie~~v---~i~~~~~kE~v~r~~t~i~n~~~FyTDsNG~em  126 (126)
                      ||++.    +++|+||+|   |+.+.+|||+||||+|+|+|+++||||+|||||
T Consensus       101 ly~~~----~~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~  150 (282)
T 1o7d_D          101 LYPRQ----RHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREI  150 (282)
T ss_dssp             ECTTC----SSEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSE
T ss_pred             EecCC----ceEEEEEEEccccccCCCCcEEEEEEEeeeccCCeEEECCCCcee
Confidence            99875    799999999   677899999999999999999999999999997



>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Back     alignment and structure
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 126
d3bvua2 522 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { 6e-25
g1o7d.2 490 b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma 1e-15
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: alpha-mannosidase, C-terminal domain
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 Score = 95.9 bits (238), Expect = 6e-25
 Identities = 52/125 (41%), Positives = 71/125 (56%), Gaps = 6/125 (4%)

Query: 1   MKSITDKDSKYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLV 60
           +KSI         P++  F+ Y  R   + SGAYLFLP G A  V +  P V++ +G L 
Sbjct: 172 LKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLE 231

Query: 61  SMVIVELPLVTHTVLVNHVADSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTD 120
           S V V LP V H  ++   A       +I+NL+DI    NTE+ MRL T+I++ D+FYTD
Sbjct: 232 SSVSVGLPSVVHQTIMRGGAP------EIRNLVDIGSLDNTEIVMRLETHIDSGDIFYTD 285

Query: 121 LNGYQ 125
           LNG Q
Sbjct: 286 LNGLQ 290


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query126
d3bvua2 522 Golgi alpha-mannosidase II {Fruit fly (Drosophila 99.96
g1o7d.2 490 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 99.85
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: alpha-mannosidase, C-terminal domain
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.96  E-value=3.5e-29  Score=205.65  Aligned_cols=120  Identities=43%  Similarity=0.675  Sum_probs=104.9

Q ss_pred             CeeEEecCCCcEEEEEEEEEEeecCCCCCCceeeEEeeCCCCccCCCCCCcEEEEeCCcEEEEEEEcCceEEEEEEeecC
Q psy11168          1 MKSITDKDSKYTSPINLDFVTYTSRKGKEMSGAYLFLPRGEAKSVPVTHPPVIIIQGPLVSMVIVELPLVTHTVLVNHVA   80 (126)
Q Consensus         1 L~si~~~~~g~~~~v~~~f~~Y~s~~~~~~SGAYiF~P~~~~~~~~~~~~~~~v~~G~lv~ev~~~~~~~~~~~rly~~~   80 (126)
                      |++|+++.++..+.++++|.+|++..+.++||||||||++++.|+....+.+.+.+||+++||++.+....|++++|+..
T Consensus       172 L~sI~~~~~~~~~~~~~~f~~y~~~~~~~~SgAYiF~P~~~~~~~~~~~~~~~v~~G~l~~ev~~~~~~~~~~v~l~~~~  251 (522)
T d3bvua2         172 LKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGLPSVVHQTIMRGGA  251 (522)
T ss_dssp             EEEEECSTTSCCEEEEEEEEEECBCSSSCCCCSSCCCBSSSCEECCCCSCCEEEEECSSCEEEEEEETTEEEEEEESSSS
T ss_pred             EEEEEEcCCCeEEEEeeEEEEEeeecCCCcccceEEccCCCccccccCCcEEEEEEeeEEEEEEEEEeeEEEEEEecCCc
Confidence            57899999999999999999999887889999999999999887656667789999999999999999555667888543


Q ss_pred             CCCCCeEEEEEEeeccCCCCeEEEEEEEeccccCCEEEecCCCCcC
Q psy11168         81 DSDDLGIDIQNLLDIRQTVNTEVAMRLTTNIENQDVFYTDLNGYQS  126 (126)
Q Consensus        81 ~~~~~~ieie~~v~i~~~~~kE~v~r~~t~i~n~~~FyTDsNG~em  126 (126)
                            .+||+.++|....|||++|||.|+|+|+++||||+|||||
T Consensus       252 ------~~ie~~~~v~~~~~kEiv~r~~t~i~s~~~fyTDsnG~~~  291 (522)
T d3bvua2         252 ------PEIRNLVDIGSLDNTEIVMRLETHIDSGDIFYTDLNGLQF  291 (522)
T ss_dssp             ------CEEEEEECCTTCTTEEEEEEEEECCCCTTEEEEEETTTEE
T ss_pred             ------eEEEEEEecCCCCceEEEEEeecccccCCEEEEcCcccce
Confidence                  4556666666678999999999999999999999999997