Psyllid ID: psy1120
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 883 | 2.2.26 [Sep-21-2011] | |||||||
| P12276 | 2512 | Fatty acid synthase OS=Ga | yes | N/A | 0.932 | 0.327 | 0.405 | 0.0 | |
| P12785 | 2505 | Fatty acid synthase OS=Ra | yes | N/A | 0.430 | 0.151 | 0.513 | 1e-120 | |
| P19096 | 2504 | Fatty acid synthase OS=Mu | yes | N/A | 0.430 | 0.151 | 0.507 | 1e-119 | |
| P49327 | 2511 | Fatty acid synthase OS=Ho | yes | N/A | 0.430 | 0.151 | 0.502 | 1e-118 | |
| P36189 | 352 | Fatty acid synthase (Frag | N/A | N/A | 0.397 | 0.997 | 0.535 | 1e-116 | |
| Q71SP7 | 2513 | Fatty acid synthase OS=Bo | yes | N/A | 0.430 | 0.151 | 0.492 | 1e-115 | |
| Q02251 | 2111 | Mycocerosic acid synthase | yes | N/A | 0.690 | 0.288 | 0.294 | 6e-71 | |
| Q10977 | 1876 | Phthiocerol synthesis pol | no | N/A | 0.354 | 0.166 | 0.415 | 3e-67 | |
| Q7TXM0 | 1876 | Phthiocerol/phenolphthioc | no | N/A | 0.354 | 0.166 | 0.412 | 1e-66 | |
| Q869W9 | 2603 | Probable polyketide synth | yes | N/A | 0.413 | 0.140 | 0.396 | 2e-65 |
| >sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5 | Back alignment and function desciption |
|---|
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/909 (40%), Positives = 541/909 (59%), Gaps = 86/909 (9%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+++ I GIAG P+S ++++F E L N VD++++DDRRWK G +P+R GKL ++ K
Sbjct: 2 EDVVIAGIAGKLPESENLQEFWENLLNGVDMVTEDDRRWKPGIYG--LPKRNGKLKDIKK 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE +YEA++D GINP +LRG+ TGV++GA SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVSYEAILDGGINPTALRGTDTGVWVGASGSEALEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ ++ G+ +TGC RAMLANR+SY+ GPS T+D+ACSSSL ALE+AYK+IR G
Sbjct: 120 LSQDPEELLGYSMTGCQRAMLANRISYFYDFTGPSLTIDTACSSSLMALENAYKAIRHGQ 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C+AA VGG N+ L P S+QF +LG+LSPDG CK+FD + NGYCRSEAV ++ L K A
Sbjct: 180 CSAALVGGVNILLKPNTSVQFMKLGMLSPDGACKAFDVSGNGYCRSEAVVVVLLTKKSMA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHG----- 327
KRVYA +V+A +N DG+KEQG+T+PSG +QQ+L+ Y EC + P ++ ++EAHG
Sbjct: 240 KRVYATIVNAGSNTDGFKEQGVTFPSGEMQQQLVGSLYRECGIKPGDVEYVEAHGTGTKV 299
Query: 328 -------------------------TGTKVGDPEE---VQALENVFC------------- 346
T + +G PE + AL V
Sbjct: 300 GDPQEVNGIVNVFCQCEREPLLIGSTKSNMGHPEPASGLAALAKVILSLEHGLWAPNLHF 359
Query: 347 --PGRTTPLL-IGSVKSNIGHSEPASGVCSVTKVILAMENG--IIPPNINFKSPRK--DI 399
P P L GS+K + G+ S+ N I+ PN P++ ++
Sbjct: 360 NDPNPDIPALHDGSLKVVCKPTPVKGGLVSINSFGFGGSNAHVILRPNEKKCQPQETCNL 419
Query: 400 PSFHN--GKIQLESRPLDAE---------YVRLFHEIHSDDIAGHMYRGYTILSANSDKK 448
P G+ Q L E ++ L +I + ++ YRGYT++ SD
Sbjct: 420 PRLVQVCGRTQEAVEILIEESRKHGGCSPFLSLLSDISAVPVSSMPYRGYTLVGTESD-- 477
Query: 449 IRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRII 508
I RPLW++ SGMG+QW GMG LM++ +F +I + LK G+ V ++
Sbjct: 478 ITEIQQVQASGRPLWYICSGMGTQWKGMGLSLMKLDLFRQSILRSDEALKSTGLKVSDLL 537
Query: 509 TDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQ 568
+ + FD+ +++FVG+AAIQI +D+L+A + PD I+GHSVGEL C YAD + E+
Sbjct: 538 LNADENTFDDTVHAFVGLAAIQIAQIDVLKAAGLQPDGILGHSVGELACGYADNSLSHEE 597
Query: 569 TILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVACHNSPDSSTISGPEENV 628
+LAAY+RG E + G MAAVGL +++ + RCPP + ACHNS D+ T+SGP ++V
Sbjct: 598 AVLAAYWRGRCVKEAKLPPGGMAAVGLTWEECKQRCPPNVVPACHNSEDTVTVSGPLDSV 657
Query: 629 KKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQ 688
+FV +L+ D +FA+ + A H+ AP L ++ +
Sbjct: 658 SEFVTKLKKDGVFAKEVRRAGVAFHS-----YYMASIAPALLSALKKVIP---------H 703
Query: 689 PKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAITLEIAPH 748
PKPRS +W+STS E+ W + LA+ SSAEYH NNL++PVLF E +HI +NA+ +EIAPH
Sbjct: 704 PKPRSARWISTSIPESQWQSDLARNSSAEYHVNNLVNPVLFHEGLKHIPENAVVVEIAPH 763
Query: 749 GLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLYPKIDFPVS 808
LLQAILRR+L T T + L ++++ N++ + L GK++ +G++ NL+P +++PV
Sbjct: 764 ALLQAILRRTLKPTCTILPLMKKDHKNNLEFFLTQTGKIHLTGINVLGNNLFPPVEYPVP 823
Query: 809 RGTPMISPLVRWEHSEDWYV---TTYRMQEKLKSGERTVVVSLKDDEME-FVSGHMIDGR 864
GTP+ISP ++W+HS+DW V + K + + + D + ++ GH IDGR
Sbjct: 824 VGTPLISPYIKWDHSQDWDVPKAEDFPSGSKGSASASVYNIDVSPDSPDHYLVGHCIDGR 883
Query: 865 NLFPATGYL 873
L+PATGYL
Sbjct: 884 VLYPATGYL 892
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Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Gallus gallus (taxid: 9031) EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 1EC: 4 |
| >sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3 | Back alignment and function description |
|---|
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 280/382 (73%), Gaps = 2/382 (0%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+E+ I G++G P+S ++++F L VD+++DDDRRWK G +P+R+GKL +++K
Sbjct: 2 EEVVIAGMSGKLPESENLQEFWANLIGGVDMVTDDDRRWKAGLYG--LPKRSGKLKDLSK 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE +YEA++D GINP SLRG+ TGV++G SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVSYEAIVDGGINPASLRGTNTGVWVGVSGSEASEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + G+ + GC RAM+ANR+S++ GPS +D+ACSSSL AL++AY++IR G
Sbjct: 120 LSRDPETLLGYSMVGCQRAMMANRLSFFFDFKGPSIALDTACSSSLLALQNAYQAIRSGE 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C AA VGG NL L P S+QF +LG+LSPDG C+SFD++ NGYCR+EAV + L K A
Sbjct: 180 CPAAIVGGINLLLKPNTSVQFMKLGMLSPDGTCRSFDDSGNGYCRAEAVVAVLLTKKSLA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
+RVYA +++A TN DG KEQG+T+PSG Q++L+ Y V P++L +IEAHGTGTKV
Sbjct: 240 RRVYATILNAGTNTDGCKEQGVTFPSGEAQEQLIRSLYQPGGVAPESLEYIEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+E+ + C R +PLLIGS KSN+GH EPASG+ ++TKV+L++ENG+ PN++F
Sbjct: 300 GDPQELNGITRSLCAFRQSPLLIGSTKSNMGHPEPASGLAALTKVLLSLENGVWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRPL 414
+P +IP+ +G++Q+ RPL
Sbjct: 360 HNPNPEIPALLDGRLQVVDRPL 381
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Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 1 EC: 4 |
| >sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2 | Back alignment and function description |
|---|
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 280/382 (73%), Gaps = 2/382 (0%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+E+ I G++G P+S ++++F L VD+++DDDRRWK G +P+R+GKL +++K
Sbjct: 2 EEVVIAGMSGKLPESENLQEFWANLIGGVDMVTDDDRRWKAGLYG--LPKRSGKLKDLSK 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE +YEA++D GINP SLRG+ TGV++G SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVSYEAIVDGGINPASLRGTNTGVWVGVSGSEASEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + G+ + GC RAM+ANR+S++ GPS +D+ACSSSL AL++AY++IR G
Sbjct: 120 LSRDPETLLGYSMVGCQRAMMANRLSFFFDFKGPSIALDTACSSSLLALQNAYQAIRSGE 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C AA VGG NL L P S+QF +LG+LSPDG C+SFD++ +GYCRSEAV + L K A
Sbjct: 180 CPAALVGGINLLLKPNTSVQFMKLGMLSPDGTCRSFDDSGSGYCRSEAVVAVLLTKKSLA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
+RVYA +++A TN DG KEQG+T+PSG +Q++L+ Y + P++L +IEAHGTGTKV
Sbjct: 240 RRVYATILNAGTNTDGSKEQGVTFPSGEVQEQLICSLYQPAGLAPESLEYIEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+E+ + C R PLLIGS KSN+GH EPASG+ ++TKV+L++E+G+ PN++F
Sbjct: 300 GDPQELNGITRSLCAFRQAPLLIGSTKSNMGHPEPASGLAALTKVLLSLEHGVWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRPL 414
+P +IP+ +G++Q+ RPL
Sbjct: 360 HNPNPEIPALLDGRLQVVDRPL 381
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Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 1 EC: 4 |
| >sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3 | Back alignment and function description |
|---|
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 277/382 (72%), Gaps = 2/382 (0%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+E+ I G++G P+S ++++F + L VD+++DDDRRWK G +P+R+GKL ++++
Sbjct: 2 EEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYG--LPRRSGKLKDLSR 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE TYEA++D GINP SLRG+ TGV++G SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + G+ + GC RAM+ANR+S++ GPS +D+ACSSSL AL++AY++I G
Sbjct: 120 LSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIHSGQ 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C AA VGG N+ L P S+QF RLG+LSP+G CK+FD A NGYCRSE V + L K A
Sbjct: 180 CPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLTKKSLA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
+RVYA +++A TN DG+KEQG+T+PSG +Q++L+ Y V P++ +IEAHGTGTKV
Sbjct: 240 RRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+E+ + C R PLLIGS KSN+GH EPASG+ ++ KV+L++E+G+ PN++F
Sbjct: 300 GDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRPL 414
SP +IP+ +G++Q+ +PL
Sbjct: 360 HSPNPEIPALLDGRLQVVDQPL 381
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Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 1 EC: 4 |
| >sp|P36189|FAS_ANSAN Fatty acid synthase (Fragment) OS=Anser anser anser GN=FASN PE=1 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 189/353 (53%), Positives = 268/353 (75%), Gaps = 2/353 (0%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+++ I GIAG P+S ++++F EKL N VD++++DDRRWK G +P+R GKL +++K
Sbjct: 2 EDVVIAGIAGKLPESENLQEFWEKLLNGVDMVTEDDRRWKPGMYG--LPKRNGKLKDISK 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE +YEA++D GINP +LRG+ TGV++GA SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVSYEAILDGGINPATLRGTDTGVWVGASGSEAGEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + Q+ G+ + GC RAM ANR+SY+ GPS ++D+ACSSSL ALE+AYK+IR+G
Sbjct: 120 FSQDPEQLLGYSMIGCQRAMFANRISYFYDFKGPSLSIDTACSSSLMALENAYKAIRNGR 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C+AA VGG NL L P S+QF +LG+LSPDG CK FD + +GYCRSEAV ++ L K A
Sbjct: 180 CSAAVVGGVNLLLKPNTSVQFMKLGMLSPDGACKVFDASGDGYCRSEAVVVVLLTKKSMA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
KR+YA +V+A +N DG+KEQG+T+PSG +Q++L+ + EC + P ++ ++E HGTGTKV
Sbjct: 240 KRIYATIVNAGSNTDGFKEQGVTFPSGDMQRQLVSSLHRECGIKPGDIEYVETHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGI 385
GDP+EV L ++FC PLLIGS KSN+GH EPASG+ ++ KV+L++E+G+
Sbjct: 300 GDPQEVNGLADLFCQCEREPLLIGSTKSNMGHPEPASGLAALAKVVLSLEHGL 352
|
Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has seven catalytic activities and an acyl carrier protein. Anser anser anser (taxid: 8844) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1 | Back alignment and function description |
|---|
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 274/382 (71%), Gaps = 2/382 (0%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+E+ ITG++G P+S ++ +F L VD+++DDDRRWK G +P+R+GKL ++++
Sbjct: 2 EEVVITGMSGKLPESENLEEFWANLIGGVDMVTDDDRRWKAGLYG--LPRRSGKLKDLSR 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAH MDP R++LE TYEA++DAGINP S+RG+ TGV++G SE+ +
Sbjct: 60 FDASFFGVHPKQAHNMDPQLRLLLEVTYEAIVDAGINPASIRGTNTGVWVGVSGSEASEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + G+ + GC RAMLANR+S++ GPS T+D+ACSSSL AL+ AY++I+ G
Sbjct: 120 LSRDPETLVGYSMVGCQRAMLANRLSFFFDFKGPSITLDTACSSSLLALQRAYQAIQRGE 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C A VGG N+ L P S+QF +LG+LSP+G CK FD + NGYCR++AV + L K A
Sbjct: 180 CAMAIVGGVNIRLKPNTSVQFMKLGMLSPEGTCKFFDASGNGYCRAKAVMAILLTKKSLA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
+RVYA +++A TN DG KE+G+T+PSG Q++L+ Y +DP+ L ++EAHGTGTKV
Sbjct: 240 RRVYATILNAGTNTDGCKEKGVTFPSGEAQEQLISSLYKPAGLDPETLEYVEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+E+ + C R +PL IGS KSN+GH EPASG+ ++ KV+L++E+G+ PN++F
Sbjct: 300 GDPQELNGIVQALCGTRQSPLRIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRPL 414
+P IP+ +G++Q+ RPL
Sbjct: 360 HNPNPKIPALQDGRLQVVDRPL 381
|
Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 1 EC: 4 |
| >sp|Q02251|MCAS_MYCBO Mycocerosic acid synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=mas PE=1 SV=2 | Back alignment and function description |
|---|
Score = 270 bits (689), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 216/733 (29%), Positives = 338/733 (46%), Gaps = 123/733 (16%)
Query: 35 ICITGIAGVFPDSTDVRD-FGEKLNNKVDLISD-DDRRWKLGKEH---PEIPQRT----- 84
+ + G+ P + D E L DL+++ RW + P +P R+
Sbjct: 8 VAVIGMGCRLPGGINSPDKLWESLLRGDDLVTEIPPDRWDADDYYDPEPGVPGRSVSRWG 67
Query: 85 GKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA 144
G L +V FDA FFG+ ++A ++DP R++LE ++EA+ AG++P SL GS T VF G
Sbjct: 68 GFLDDVAGFDAEFFGISEREATSIDPQQRLLLETSWEAIEHAGLDPASLAGSSTAVFTGL 127
Query: 145 CFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHA 204
+ + + +TG + ++ + R+++ LG++GP+ T D+ACSS L A+ A
Sbjct: 128 THEDYLVLTTTAGGLASPYVVTGLNNSVASGRIAHTLGLHGPAMTFDTACSSGLMAVHLA 187
Query: 205 YKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIM 264
+S+ DG + A GGC + L P+ + + G+LS GRC SFD A+G+ RSE C M
Sbjct: 188 CRSLHDGEADLALAGGCAVLLEPHACVAASAQGMLSSTGRCHSFDADADGFVRSEG-CAM 246
Query: 265 YLQKS-----KDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKN 319
L K +D R++A V TN DG E +T PS Q + + V P+
Sbjct: 247 VLLKRLPDALRDGNRIFAVVRGTATNQDGRTET-LTMPSEDAQVAVYRAALAAAGVQPET 305
Query: 320 LAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVIL 379
+ +EAHGTGT +GDP E ++L V+ G TP +GS KSN+GHS ++G + K IL
Sbjct: 306 VGVVEAHGTGTPIGDPIEYRSLARVYGAG--TPCALGSAKSNMGHSTASAGTVGLIKAIL 363
Query: 380 AMENGIIP----------------------------PNINFKSPRK-DIPSFHNGKIQL- 409
++ +G++P PN N +P++ + SF +
Sbjct: 364 SLRHGVVPPLLHFNRLPDELSDVETGLFVPQAVTPWPNGNDHTPKRVAVSSFGMSGTNVH 423
Query: 410 -------------ESRPLDAEY-VRLFH--------------------EIHSDDIAGHMY 435
ES P DAE RLF E H D +A
Sbjct: 424 AIVEEAPAEASAPESSPGDAEVGPRLFMLSSTSSDALRQTARQLATWVEEHQDCVAASDL 483
Query: 436 RGYTILSANSDKKIRSST---HYP----------------------GDTRPLWFVFSGMG 470
YT+ + + +R++ + P GD P+W VFSG G
Sbjct: 484 -AYTLARGRAHRPVRTAVVAANLPELVEGLREVADGDALYDAAVGHGDRGPVW-VFSGQG 541
Query: 471 SQWDGMGTELMEI-PIFAATIEKLQAVLKPK-GVDVKRIITDTNPKMFDNILNSFVGIAA 528
SQW MGT+L+ P+FAATI KL+ V+ + G V I T + I + A
Sbjct: 542 SQWAAMGTQLLASEPVFAATIAKLEPVIAAESGFSVTEAI--TAQQTVTGIDKVQPAVFA 599
Query: 529 IQIGLVDIL-RALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFI- 586
+Q+ L + + + P ++GHS+GE A G ++E R + + T
Sbjct: 600 VQVALAATMEQTYGVRPGAVVGHSMGESAAAVVAGALSLEDAARVICRR--SKLMTRIAG 657
Query: 587 RGAMAAVGLGYK----DLRSRCPPEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFA 642
GAM +V L K +L +R ++ V+ SP S+ I G + V+ +A + ++ A
Sbjct: 658 AGAMGSVELPAKQVNSELMARGIDDVVVSVVASPQSTVIGGTSDTVRDLIARWEQRDVMA 717
Query: 643 RTINVANTEKHAP 655
R + V + H+P
Sbjct: 718 REVAV-DVASHSP 729
|
Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids. Mycobacterium bovis (taxid: 1765) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 1 EC: 1 |
| >sp|Q10977|PPSA_MYCTU Phthiocerol synthesis polyketide synthase type I PpsA OS=Mycobacterium tuberculosis GN=ppsA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 257 bits (657), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 198/320 (61%), Gaps = 7/320 (2%)
Query: 87 LYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACF 146
L +++ FDA FF + +A MDP R++LE +EA+ AGI P +LR S TGVF GAC
Sbjct: 166 LPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPGTLRRSATGVFAGACL 225
Query: 147 SESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYK 206
SE + Q++G+ +G + +++ANR+SY+L + GPS VD+ACSSSL A+ A +
Sbjct: 226 SEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVDTACSSSLVAIHLACQ 285
Query: 207 SIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYL 266
S+R C+ A G NL L P V F ++G LSP G+C++FD A+G+ R E ++ L
Sbjct: 286 SLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDATADGFVRGEGAGVVVL 345
Query: 267 QKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAW 322
++ DA+ RV A + + N DG + G+ P+ A Q +L Y+ + P + +
Sbjct: 346 KRLTDAQRDGDRVLAVICGSAVNQDG-RSNGLMAPNPAAQMAVLRAAYTNAGMQPSEVDY 404
Query: 323 IEAHGTGTKVGDPEEVQALENVFCPGR--TTPLLIGSVKSNIGHSEPASGVCSVTKVILA 380
+EAHGTGT +GDP E +AL V GR +PLLIGSVK+N+GH+E A+G+ K +LA
Sbjct: 405 VEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTEAAAGIAGFIKTVLA 464
Query: 381 MENGIIPPNINFKSPRKDIP 400
+++G IPPN +F++ IP
Sbjct: 465 VQHGQIPPNQHFETANPHIP 484
|
Involved in the elongation of either C22-24 fatty acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol derivatives. Mycobacterium tuberculosis (taxid: 1773) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q7TXM0|PPSA_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 197/320 (61%), Gaps = 7/320 (2%)
Query: 87 LYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACF 146
L +++ FDA FF + +A MDP R++LE +EA+ AGI P +LR S TGVF GAC
Sbjct: 166 LPDIDAFDAEFFEISPSEADKMDPQQRLLLEVAWEALEHAGIPPGTLRRSATGVFAGACL 225
Query: 147 SESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYK 206
SE + Q++G+ +G + +++ANR+SY+L + GPS VD+ACSSSL A+ A +
Sbjct: 226 SEYGAMASADLSQVDGWSNSGGAMSIIANRLSYFLDLRGPSVAVDTACSSSLVAIHLACQ 285
Query: 207 SIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYL 266
S+R C+ A G NL L P V F ++G LSP G+C++FD A+G+ R E ++ L
Sbjct: 286 SLRTQDCHLAIAAGVNLLLSPAVFRGFDQVGALSPTGQCRAFDATADGFVRGEGAGVVVL 345
Query: 267 QKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAW 322
++ DA+ RV A + + DG + G+ P+ A Q +L Y+ + P + +
Sbjct: 346 KRLTDAQRDGDRVLAVICGSAVTQDG-RSNGLMAPNPAAQMAVLRAAYTNAGMQPSEVDY 404
Query: 323 IEAHGTGTKVGDPEEVQALENVFCPGR--TTPLLIGSVKSNIGHSEPASGVCSVTKVILA 380
+EAHGTGT +GDP E +AL V GR +PLLIGSVK+N+GH+E A+G+ K +LA
Sbjct: 405 VEAHGTGTLLGDPIEARALGTVLGRGRPEDSPLLIGSVKTNLGHTEAAAGIAGFIKTVLA 464
Query: 381 MENGIIPPNINFKSPRKDIP 400
+++G IPPN +F++ IP
Sbjct: 465 VQHGQIPPNQHFETANPHIP 484
|
Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively. Mycobacterium bovis (taxid: 1765) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q869W9|PKS16_DICDI Probable polyketide synthase 16 OS=Dictyostelium discoideum GN=pks16 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 214/378 (56%), Gaps = 13/378 (3%)
Query: 32 GDEICITGIAGVFPDSTDVRD-FGEKLNNKVDLISD-DDRRWKLG-KEHPEIPQRTG--- 85
D+I I G+ FP + D F +L+NK+D IS +W E I G
Sbjct: 11 NDDIAIIGMGFRFPGGGNNPDQFWNQLSNKMDGISKISQEKWSRSFYEQKYINNEYGGVL 70
Query: 86 KLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGAC 145
K E FD FFG+ K+A T+DP R+++ +EA DA I P +LRGS T VFIG
Sbjct: 71 KDEEWKNFDPLFFGISPKEAPTIDPQQRLLMTTLWEAFEDANIKPSTLRGSDTAVFIGMM 130
Query: 146 FSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAY 205
+ ++ F + IN + +TG + + ++NR+S+ + GPS T+D+ACSSSL A+
Sbjct: 131 NLDYQRCQFRDISYINPYTVTGSAGSFVSNRLSFSFDLRGPSMTLDTACSSSLNAVYLGC 190
Query: 206 KSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSE--AVCI 263
++I G A VGG N P +S+ F+ L +L G+C+SFD A+GY RSE VCI
Sbjct: 191 QAIATGDSKMAIVGGVNGIFDPSISMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCI 250
Query: 264 M--YLQKSKDAKRVYARVVHAKTNCDGYKEQ-GITYPSGALQQRLLEDFYSECEVDPKNL 320
+ Y KD R+Y + +N DGY + IT PS Q +E + V+P ++
Sbjct: 251 LKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNITQPSMKAQGENIEIALKKSGVNPSDI 310
Query: 321 AWIEAHGTGTKVGDPEEVQALENVFCPGRT--TPLLIGSVKSNIGHSEPASGVCSVTKVI 378
+IEAHGTGT VGDP E++A+ +F T PL IGSVKSNIGH E A+G+ S+ KV
Sbjct: 311 YYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVA 370
Query: 379 LAMENGIIPPNINFKSPR 396
L+++N + PNI+F+ P
Sbjct: 371 LSLKNRSLVPNIHFEKPN 388
|
Probable polyketide synthase. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 883 | ||||||
| 156549724 | 3088 | PREDICTED: fatty acid synthase-like [Nas | 0.947 | 0.271 | 0.608 | 0.0 | |
| 112984340 | 2422 | p270 [Bombyx mori] gi|2058460|gb|AAB5325 | 0.962 | 0.350 | 0.579 | 0.0 | |
| 328721179 | 2404 | PREDICTED: fatty acid synthase-like [Acy | 0.953 | 0.350 | 0.597 | 0.0 | |
| 332025926 | 2409 | Fatty acid synthase [Acromyrmex echinati | 0.956 | 0.350 | 0.584 | 0.0 | |
| 357631736 | 2420 | p270 [Danaus plexippus] | 0.963 | 0.351 | 0.586 | 0.0 | |
| 307180374 | 2409 | Fatty acid synthase [Camponotus floridan | 0.949 | 0.347 | 0.578 | 0.0 | |
| 322792317 | 964 | hypothetical protein SINV_05241 [Solenop | 0.958 | 0.877 | 0.562 | 0.0 | |
| 307213875 | 2408 | Fatty acid synthase [Harpegnathos saltat | 0.942 | 0.345 | 0.569 | 0.0 | |
| 350407733 | 2418 | PREDICTED: fatty acid synthase-like [Bom | 0.939 | 0.343 | 0.546 | 0.0 | |
| 383856217 | 2420 | PREDICTED: fatty acid synthase-like [Meg | 0.944 | 0.344 | 0.546 | 0.0 |
| >gi|156549724|ref|XP_001605685.1| PREDICTED: fatty acid synthase-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 1161 bits (3003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/921 (60%), Positives = 692/921 (75%), Gaps = 84/921 (9%)
Query: 24 RRLARPAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQR 83
++L R AP +EI I+GIAG FPDS D++ F E L NKVDL++DDDRRWKL +HPEIPQ
Sbjct: 687 KKLKRVAPEEEIVISGIAGRFPDSNDMKHFQENLMNKVDLVTDDDRRWKL--DHPEIPQN 744
Query: 84 TGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIG 143
TGK+ V KFDA FFGVHFKQAHTMDPMCR++LE YEA++DAG+NPK +RGS+ GVFIG
Sbjct: 745 TGKVNNVEKFDALFFGVHFKQAHTMDPMCRMLLEHAYEAIVDAGVNPKQMRGSRCGVFIG 804
Query: 144 ACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEH 203
ACFSESEKTWFYEKLQ+NGFGITGCSRAMLANR+SYWLGV GPSY+VDSACSSSL+A+EH
Sbjct: 805 ACFSESEKTWFYEKLQVNGFGITGCSRAMLANRISYWLGVTGPSYSVDSACSSSLFAMEH 864
Query: 204 AYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCI 263
AY++IRDG C++A VGG NLCLHPYVSLQF+RLGVLSPDGRCKSFD++ANGY RSEA+ +
Sbjct: 865 AYRAIRDGLCDSALVGGANLCLHPYVSLQFSRLGVLSPDGRCKSFDDSANGYARSEAISM 924
Query: 264 MYLQKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWI 323
++LQK+KDAKR+YA VHAKTNCDG+KEQGIT+PS +Q LL++FY E V P +L++I
Sbjct: 925 VFLQKAKDAKRIYATFVHAKTNCDGFKEQGITFPSSIMQGTLLKEFYEEIGVPPTSLSYI 984
Query: 324 EAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVIL---- 379
EAHGTGTKVGDPEEV AL+ VFC GR+ PL +GS+KSN+GHSEPASG+CS+ KV++
Sbjct: 985 EAHGTGTKVGDPEEVNALDRVFCTGRSEPLWVGSIKSNLGHSEPASGLCSIAKVVIGMHT 1044
Query: 380 -----------------AMENG----IIPPN----------------------------- 389
A+E G + P
Sbjct: 1045 GLIPPNLHFKKIRQGIKALEEGRLKVVTDPTPWDGGYAGINSFGFGGANAHVLLKSHEKE 1104
Query: 390 -INFKSPRKDIPSF--------HNGKI---QLESRPLDAEYVRLFHEIHSDDIAGHMYRG 437
+N P D+P H K+ LESRP+D EYVRL H IHS++I H+YRG
Sbjct: 1105 KVNNGLPNDDLPRVVAVSGRTEHAIKVLLDDLESRPVDIEYVRLLHNIHSEEIGSHLYRG 1164
Query: 438 YTILSANSDKK--IRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQA 495
YT+L K +R +Y G+ RP+WFVFSGMGSQW GMG LM +P+FAA I+K A
Sbjct: 1165 YTVLPPRGLVKNPVREIANYLGNKRPVWFVFSGMGSQWPGMGEALMRLPVFAAAIKKCDA 1224
Query: 496 VLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGEL 555
VLKP+G+++ IIT+ +PK FDNILNSFVGIAA+QIGLVD+L+++ I PD+IIGHSVGEL
Sbjct: 1225 VLKPRGINIVDIITNKDPKTFDNILNSFVGIAAVQIGLVDVLKSVGIEPDNIIGHSVGEL 1284
Query: 556 GCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVACHNS 615
GCAYADGCFT EQ IL+AY RG+AS+E++ I+G+MAAVGLGY +++S CPP+IEVACHN+
Sbjct: 1285 GCAYADGCFTAEQMILSAYSRGVASIESKIIQGSMAAVGLGYNEIKSMCPPDIEVACHNA 1344
Query: 616 PDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRA 675
DS+TISGP E++K FVA+LQA+NIFA+ +N +N H+ R P P L ++
Sbjct: 1345 ADSATISGPAESLKAFVAKLQANNIFAKEVNCSNIPYHS-----RYIAPAGPKLLAYLQK 1399
Query: 676 CMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRH 735
+ +PKPRS+KWLSTS + W T A+ SAEYHTNNLLS VLFEETS
Sbjct: 1400 VIP---------EPKPRSSKWLSTSVPRSKWDTAAARLCSAEYHTNNLLSSVLFEETSAL 1450
Query: 736 IQKNAITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGVHPH 795
I K+AI +EIAPHGLLQAILRRSL TV+N++LT+R +A++V L QALGK+Y +G+ P
Sbjct: 1451 IPKDAICIEIAPHGLLQAILRRSLAPTVSNIALTKRGHADNVEMLAQALGKMYNAGLQPQ 1510
Query: 796 LANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGERTVVVSLKDDEMEF 855
L LYP + FPVSR TPMISPLV+WEHS+DWYVT+YRMQEK+ SGER V V+L D++ EF
Sbjct: 1511 LHELYPHVAFPVSRTTPMISPLVKWEHSDDWYVTSYRMQEKITSGERVVEVTLADEDFEF 1570
Query: 856 VSGHMIDGRNLFPATGYLATV 876
V+GH+IDGRNLFPATGYLA +
Sbjct: 1571 VAGHVIDGRNLFPATGYLALI 1591
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|112984340|ref|NP_001037478.1| p270 [Bombyx mori] gi|2058460|gb|AAB53258.1| p270 [Bombyx mori] | Back alignment and taxonomy information |
|---|
Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/935 (57%), Positives = 684/935 (73%), Gaps = 85/935 (9%)
Query: 11 AKLTSKELALKAGRRLARPAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRR 70
A T E L +G RL+ P GDE+ +TG++G FPDS V+ E L NKVDLIS DDRR
Sbjct: 2 APTTVVEDRLTSGHRLSHPPSGDEVYVTGVSGYFPDSDSVKHLQENLFNKVDLISSDDRR 61
Query: 71 WKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINP 130
WKL HPEIPQRTGK+ VNKFDA+FFGVH+KQAHTMDPMCRI+LEK YEA++DAG+NP
Sbjct: 62 WKLA--HPEIPQRTGKINNVNKFDASFFGVHYKQAHTMDPMCRILLEKAYEAIVDAGLNP 119
Query: 131 KSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTV 190
K LR +KTGVFIGACFSESEKTWFYEK+Q+NGFGITGCSRAMLANR+SYWLGV GPSYTV
Sbjct: 120 KELRDTKTGVFIGACFSESEKTWFYEKMQVNGFGITGCSRAMLANRISYWLGVTGPSYTV 179
Query: 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDE 250
DSACSSSLYALEHA+++IRDGHC+AA VGG NLCLHP+VSLQF+RLGVLSPDG+CKSFD
Sbjct: 180 DSACSSSLYALEHAFRAIRDGHCDAAIVGGSNLCLHPFVSLQFSRLGVLSPDGKCKSFDN 239
Query: 251 AANGYCRSEAVCIMYLQKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFY 310
+ANGY RSEA+ + +LQK+KD++RVYA+++HAKTNCDGYKEQGITYP+G +Q+ LL +FY
Sbjct: 240 SANGYARSEAIVVCFLQKAKDSRRVYAQLLHAKTNCDGYKEQGITYPAGHIQKLLLREFY 299
Query: 311 SECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASG 370
EC + P L ++EAHGTGT+VGDPEE+ A++ +FC GR+ PLL+GS+KSN+GHSEPASG
Sbjct: 300 EECSIPPSELEFVEAHGTGTRVGDPEELLAIDEIFCTGRSGPLLLGSIKSNLGHSEPASG 359
Query: 371 VCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQL--------------------- 409
+CS+ K+ +A G IPPN+N+ PR+ + + +G++ +
Sbjct: 360 LCSIAKMCIAYTTGYIPPNLNYSIPREGVSALVDGRMNVITDKQAWNRGMSGINSFGFGG 419
Query: 410 -----------------------------ESRPLDAEYVRLFHEIHSDDIAGHMYR---- 436
S ++ R+F ++ S + + R
Sbjct: 420 ANAHVLLKNVARDKVNNGIPKDDLPRLVCASGRTESAVARIFDDLESRTVDAELVRLLHS 479
Query: 437 ------------GYTILSAN---SDKKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELM 481
G+T+L + S+ R +Y G RP+WFV+SGMGSQW GMG +LM
Sbjct: 480 IHDQDIAGHVVRGFTLLGSTPTKSESLARDIQYYSGVRRPVWFVYSGMGSQWPGMGAQLM 539
Query: 482 EIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALN 541
IP+FAA IEK VLKPKG++V +IITD++PKMFD++LNSFVGIAAIQIGL D+L+++
Sbjct: 540 RIPVFAAAIEKCNNVLKPKGINVVKIITDSDPKMFDDVLNSFVGIAAIQIGLTDVLKSVG 599
Query: 542 ITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLR 601
I PDHIIGHSVGELGCAYADGCFT EQ IL+AY RGLASVET I+G+MAAVGLGY ++
Sbjct: 600 IEPDHIIGHSVGELGCAYADGCFTAEQMILSAYSRGLASVETTLIKGSMAAVGLGYSQVK 659
Query: 602 SRCPPEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRA 661
S CPPEI VACHN PDSST++GP + +K FVA+L A IFA+ + +N H+ +
Sbjct: 660 SMCPPEIVVACHNGPDSSTVAGPADAMKAFVAKLTAQGIFAKEVPSSNIAYHS-----KY 714
Query: 662 QRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTN 721
P L + + + PKPR+ +W+STS ++ W A+ SSAEYHTN
Sbjct: 715 VAEAGPKLLKYLSQVIPS---------PKPRTERWVSTSIPQSQWKESKARLSSAEYHTN 765
Query: 722 NLLSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLL 781
NLLSPVLFEE S I NAIT+EIAPHGLLQAILRRSL K V N+ LTQR ++++V LL
Sbjct: 766 NLLSPVLFEEASSLIHNNAITIEIAPHGLLQAILRRSLKKDVINIPLTQRGHSDNVQVLL 825
Query: 782 QALGKLYESGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGE 841
ALG LY+SG++PHLAN+YP I FPVS+GTPM++ LV WEHSEDWYVT+Y+ Q+K+KSGE
Sbjct: 826 TALGNLYQSGLNPHLANIYPHIPFPVSQGTPMLAHLVEWEHSEDWYVTSYKAQDKMKSGE 885
Query: 842 RTVVVSLKDDEMEFVSGHMIDGRNLFPATGYLATV 876
RTV +S+ D++ E+++GH++DGRNL+PATGYL V
Sbjct: 886 RTVRMSIVDEDSEYMAGHVVDGRNLYPATGYLVLV 920
|
Source: Bombyx mori Species: Bombyx mori Genus: Bombyx Family: Bombycidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328721179|ref|XP_001949072.2| PREDICTED: fatty acid synthase-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/931 (59%), Positives = 682/931 (73%), Gaps = 89/931 (9%)
Query: 14 TSKELALKAGRRLARPAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKL 73
T +E+AL+AGRRL + PGDEI I+G +G FP+S + DF + L NKVDLISDD+RRW +
Sbjct: 13 TDREIALRAGRRLVKCDPGDEIVISGFSGSFPNSDGLPDFADNLFNKVDLISDDNRRWTI 72
Query: 74 GKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSL 133
EHPEIPQRTGKL +VNKFDAAFFGVH+KQAHTMDPMCRIILEK+YEA++D+G +PKSL
Sbjct: 73 --EHPEIPQRTGKLNQVNKFDAAFFGVHYKQAHTMDPMCRIILEKSYEAIVDSGNSPKSL 130
Query: 134 RGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSA 193
+GSKTGVF+GACFSESEKTWFYEKLQ+NGFG+TGC+RAMLANR+SYWLGVNGPSY+VDSA
Sbjct: 131 KGSKTGVFVGACFSESEKTWFYEKLQVNGFGLTGCARAMLANRISYWLGVNGPSYSVDSA 190
Query: 194 CSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAAN 253
CSSSLYALEHAYK+IRDGHC++A VGGCNLCLHPYVSLQFARLGVL DGRCKSFDEAAN
Sbjct: 191 CSSSLYALEHAYKAIRDGHCDSALVGGCNLCLHPYVSLQFARLGVLCADGRCKSFDEAAN 250
Query: 254 GYCRSEAVCIMYLQKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSEC 313
GY RSEAVC++YLQK+K+AKRVYA+VVHAKTNCDGYKEQGITYPSG LQQRLLE+FY EC
Sbjct: 251 GYVRSEAVCVLYLQKAKNAKRVYAKVVHAKTNCDGYKEQGITYPSGPLQQRLLEEFYEEC 310
Query: 314 EVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCS 373
E+ P +LAWIEAHGTGTKVGDPEEV+ALENVFCPGRTTPLLIGSVKSNIGHSEPASG+CS
Sbjct: 311 EIKPSDLAWIEAHGTGTKVGDPEEVKALENVFCPGRTTPLLIGSVKSNIGHSEPASGLCS 370
Query: 374 VTKV---------------------ILAMENGII-------PPN---------------- 389
V KV I A NG I P N
Sbjct: 371 VAKVIIAMESGFIPPNINFNTPREDITAFYNGRINVVADKTPWNGGLVGINSFGFGGANC 430
Query: 390 -----------INFKSPRKDIPSF--HNGKIQ---------LESRPLDAEYVRLFHEIHS 427
IN P D+P +G+ + SR LD EYVRL ++ +
Sbjct: 431 HVLLNWNNKSKINNGLPEDDLPRLVVASGRTEEAVTTILNDFLSRSLDKEYVRLLQDVQA 490
Query: 428 DDIAGHMYRGYTILS----ANSDKKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEI 483
+ I GH+YRGYTI+ AN ++ +Y G++R + FVFSGMGSQW GMGT LM++
Sbjct: 491 EQIPGHIYRGYTIIKKDCKANQSMDLQ---YYSGESRSVCFVFSGMGSQWTGMGTSLMQL 547
Query: 484 PIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNIT 543
PIF +I K ++LK G+D+ +IIT T+ + +N +NSFVGIAA+QI L D+L A+ IT
Sbjct: 548 PIFNESISKSHSILKEFGIDLVKIITSTDANILNNTVNSFVGIAAMQIALFDVLVAIGIT 607
Query: 544 PDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSR 603
PD IIGHS+GEL CAYADGC T EQTI AYY GLA++ ++ GAMA VG+GY ++
Sbjct: 608 PDIIIGHSIGELVCAYADGCLTSEQTIKVAYYYGLATLNSKIPLGAMAFVGIGYNQIKDL 667
Query: 604 CPPEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQR 663
P + VA HNSPDS ISG +E+V++FV +L++ +I + INV NT H+ + +
Sbjct: 668 LPTNVVVAWHNSPDSCAISGLKESVEQFVLKLKSKDISTQMINVLNTPYHST-----SIK 722
Query: 664 PPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNL 723
P L + ++ ++ PK RS KWLSTS E W AKY SAEY N+L
Sbjct: 723 KAIPSLLEYLK---------NIITNPKLRSGKWLSTSVPEEKWGEDKAKYCSAEYCANSL 773
Query: 724 LSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQA 783
L+ VLF+ET H+ K ++ +E+APHG+LQ +L RS +TNV L R + + YLL A
Sbjct: 774 LNSVLFDETFEHVPKGSVLIELAPHGVLQDVLNRSHKTNITNVDLASRNYKDGIDYLLSA 833
Query: 784 LGKLYESGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGERT 843
GK++E+G++P ++NLYP I+FPVSRGTPMI+PLVRWEHSEDWYVT YR+Q+K+KSGER
Sbjct: 834 FGKIFEAGLNPKISNLYPDIEFPVSRGTPMIAPLVRWEHSEDWYVTMYRVQDKIKSGERN 893
Query: 844 VVVSLKDDEMEFVSGHMIDGRNLFPATGYLA 874
+ +SLKD+E E++SGH+IDGRNLFPATGYL
Sbjct: 894 ISISLKDEEHEYLSGHVIDGRNLFPATGYLV 924
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332025926|gb|EGI66082.1| Fatty acid synthase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/933 (58%), Positives = 687/933 (73%), Gaps = 88/933 (9%)
Query: 13 LTSKELALKAGRRLARPAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWK 72
+T+++L K+ + P PG+EI I+GIAG FP+S +V +F L NKVD+++DDDRRWK
Sbjct: 1 MTTRKLFTKSYKT---PEPGEEIVISGIAGRFPESKNVEEFKNNLLNKVDMVTDDDRRWK 57
Query: 73 LGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKS 132
L +HP+IPQRTGK+ +VNKFDA FFGVHFKQAHTMDPMCRI+LE YEA+IDAG+NPK
Sbjct: 58 L--DHPDIPQRTGKINDVNKFDALFFGVHFKQAHTMDPMCRILLEHAYEAIIDAGVNPKQ 115
Query: 133 LRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDS 192
LRGS+TGVF+GACFSESEKTWFYEKLQ+NGFGITGCSRAMLANR+SYWLGV GPSYT+DS
Sbjct: 116 LRGSRTGVFVGACFSESEKTWFYEKLQVNGFGITGCSRAMLANRISYWLGVTGPSYTLDS 175
Query: 193 ACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAA 252
ACSSSL ALEHAY+ ++DG C+AA VGG NLCLHPYVSLQF+RLGVLSPDGR K+FD A
Sbjct: 176 ACSSSLIALEHAYRCLQDGQCDAALVGGSNLCLHPYVSLQFSRLGVLSPDGRSKAFDADA 235
Query: 253 NGYCRSEAVCIMYLQKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSE 312
NGY RSE +C++YLQK+K+AKR+YA VV+ KTNCDGYK+QGIT+PS +Q LLE+ Y +
Sbjct: 236 NGYARSETICVIYLQKAKNAKRIYATVVYGKTNCDGYKQQGITFPSSNMQATLLEECYKD 295
Query: 313 CEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFC-PGRTTPLLIGSVKSNIGHSEPASGV 371
C + ++ +IE HGTGTKVGDPEE+ A+E VF R TPLLIGSVKSN+GH+EPASG+
Sbjct: 296 CNILLNDVFYIECHGTGTKVGDPEELHAIEKVFFEKDRPTPLLIGSVKSNMGHAEPASGL 355
Query: 372 CSVTKVILAM---------------------ENGII------------------------ 386
V K+I+AM E+G I
Sbjct: 356 SQVAKIIIAMESGIIPSNLHFNRPREGLKALEDGRIKVVTEPTPWKGSYAGINSFGFGGA 415
Query: 387 ---------PPN-INFKSPRKDIPSFH--NGKIQ---------LESRPLDAEYVRLFHEI 425
P N IN +P D+P +G+ + +E P+D EY+RL H+I
Sbjct: 416 NCHIVLKSHPKNKINDGAPSDDLPRLVIVSGRTEDSVKVFLDDVERHPVDIEYIRLLHDI 475
Query: 426 HSDDIAGHMYRGYTIL--SANSDKKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEI 483
H DDI GH+YRGYT++ ++ ++ IR +Y G RPLWFVFSGMGSQW GMGTELM
Sbjct: 476 HFDDIQGHLYRGYTVVGRTSKAEHSIREVENYLGTARPLWFVFSGMGSQWPGMGTELMRF 535
Query: 484 PIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNIT 543
P+FA I+K AVL+P+GVD+ I+T+ + +F+NIL+SFVGIAA+QIGLVD+L ++ I
Sbjct: 536 PVFAEAIKKCDAVLRPRGVDIINILTNKDKTIFNNILHSFVGIAAVQIGLVDLLTSVGIV 595
Query: 544 PDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSR 603
PD+IIGHSVGELGCAYADGCFT EQ IL+AY RGLAS+ETE I G+MAAVGLGY+D++
Sbjct: 596 PDNIIGHSVGELGCAYADGCFTAEQMILSAYSRGLASIETEVIYGSMAAVGLGYEDIKDM 655
Query: 604 CPPEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQR 663
CPP+IEVACHN+ DSSTISGP E++KKF+A+LQA IFA+ + +N H+ R
Sbjct: 656 CPPDIEVACHNASDSSTISGPAESMKKFIAQLQAKQIFAKEVPCSNIPYHS-----RYIA 710
Query: 664 PPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNL 723
P P L + + Q KPRS KWLSTS W+T +AK SSAEYHTNNL
Sbjct: 711 PAGPKLLAHMNKIIP---------QSKPRSRKWLSTSVPRNKWSTAVAKLSSAEYHTNNL 761
Query: 724 LSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQA 783
L+PVLFEET+R I K+A+T+EIAPH LLQAILRRSL VTN+ LTQR + ++V +LQ
Sbjct: 762 LNPVLFEETARLIPKDAVTIEIAPHALLQAILRRSLGSEVTNIGLTQRGHRDNVEVVLQG 821
Query: 784 LGKLYESGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGERT 843
LGKLY +G+ P +A LYP +++PVSRGTPMI+P +RWEH++DW+VT Y++Q+K+ SGERT
Sbjct: 822 LGKLYNAGLQPDIAKLYPPVEYPVSRGTPMIAPSIRWEHTDDWFVTAYKLQKKVTSGERT 881
Query: 844 VVVSLKDDEMEFVSGHMIDGRNLFPATGYLATV 876
V++++ DD E++ GH+IDG+NL PA GYLA V
Sbjct: 882 VIMNITDDTFEYMIGHVIDGKNLIPAIGYLAMV 914
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357631736|gb|EHJ79205.1| p270 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/945 (58%), Positives = 679/945 (71%), Gaps = 94/945 (9%)
Query: 1 MGPAPNSPAPAKLTSKELALKAGRRLARPAPGDEICITGIAGVFPDSTDVRDFGEKLNNK 60
M P+P S E L +G RL+ P PGDE+ ITGI+G FPDS V E L NK
Sbjct: 1 MAPSPVS---------EDRLTSGHRLSHPPPGDEVLITGISGYFPDSDSVLHLQENLFNK 51
Query: 61 VDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTY 120
VDLIS D RRWKL HPEIPQRTGK+ VN+FDA+FFGVHFKQAHTMDPMCRI+LEK Y
Sbjct: 52 VDLISGDARRWKLA--HPEIPQRTGKINNVNRFDASFFGVHFKQAHTMDPMCRILLEKAY 109
Query: 121 EAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYW 180
EAVIDAG+NPK LRG+KTGVFIGACFSESEKTWFYEK+Q+NGFG+TGCSRAMLANR+SYW
Sbjct: 110 EAVIDAGLNPKELRGTKTGVFIGACFSESEKTWFYEKMQVNGFGVTGCSRAMLANRISYW 169
Query: 181 LGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS 240
LGV GPSYTVDSACSSSLYALEHA+++IRDGHC+AA VGG NLCLHPYVSLQF+RLGVLS
Sbjct: 170 LGVTGPSYTVDSACSSSLYALEHAFRAIRDGHCDAAIVGGSNLCLHPYVSLQFSRLGVLS 229
Query: 241 PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGA 300
DGRCKSFD +ANGY RSEA+ + LQK+KD++RVYA+V+HAKTNCDGYKEQGITYP+G
Sbjct: 230 ADGRCKSFDNSANGYARSEAIVVCLLQKAKDSRRVYAQVLHAKTNCDGYKEQGITYPAGN 289
Query: 301 LQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKS 360
+Q+ LL +FY EC + P L ++EAHGTGT+VGDPEE+ A+E+VFC GR+ PL+IGS+KS
Sbjct: 290 IQKLLLNEFYEECSIPPNTLEFVEAHGTGTRVGDPEELVAIEDVFCTGRSEPLMIGSIKS 349
Query: 361 ----------------------------NIGHSEPASGVCSVT----KVIL--------- 379
N+ + P GV +++ KVI
Sbjct: 350 NLGHSEPASGLCSIAKLCIAYSTGYIPPNLHFTVPREGVKALSENRLKVITQKHPWNRGM 409
Query: 380 --------------AMENGIIPPNINFKSPRKDIPSFH--NGKIQ---------LESRPL 414
+ + +N P D+P +G+ + LESR +
Sbjct: 410 SGINSFGFGGANAHTLLKNVAREKVNNGIPSDDLPRLVCVSGRTESAVAKILDDLESRTV 469
Query: 415 DAEYVRLFHEIHSDDIAGHMYRGYTILSAN---SDKKIRSSTHYPGDTRPLWFVFSGMGS 471
DAE +RL H IH DDI GH+ RGY++L + S R ++ G RP+WFV+SGMGS
Sbjct: 470 DAELIRLLHAIHDDDITGHVVRGYSLLESTPVKSKSVSRDIQYFSGVKRPVWFVYSGMGS 529
Query: 472 QWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQI 531
QW GM T+LM IP+FAA I K L+PKGV++ + ITD +P ++DNILNSF+GIAA+QI
Sbjct: 530 QWAGMATQLMRIPVFAAAINKCHKALEPKGVNLIKTITDPDPSIYDNILNSFIGIAAVQI 589
Query: 532 GLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMA 591
GL D+L+A+ I PD IIGHSVGELGCAYADGCFT EQ IL+AY RGLAS+ET FI+G+MA
Sbjct: 590 GLTDVLKAVGIEPDFIIGHSVGELGCAYADGCFTAEQMILSAYSRGLASIETPFIKGSMA 649
Query: 592 AVGLGYKDLRSRCPPEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTE 651
AVGLGY ++S PPEIEVACHN PDSSTISGP E +K FVA+L A +FA+ + +N
Sbjct: 650 AVGLGYAQIKSIIPPEIEVACHNGPDSSTISGPAEIMKSFVAKLVAQGVFAKEVPCSNIA 709
Query: 652 KHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLA 711
H+ + P L +R + QPK RS +W+STS + W A
Sbjct: 710 YHS-----KYIADAGPKLLQYLREVIP---------QPKSRSERWVSTSVPQMLWKDPRA 755
Query: 712 KYSSAEYHTNNLLSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVSLTQR 771
SSAEYHTNNLLSPVLFEET+R I NAIT+EIAPHGLLQAILRRSL K V N+ LT++
Sbjct: 756 TLSSAEYHTNNLLSPVLFEETARLIPGNAITIEIAPHGLLQAILRRSLKKDVLNIPLTEK 815
Query: 772 ENANSVLYLLQALGKLYESGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTY 831
++A++V Y L ALGKLYE+G++PHLAN+YP + FPVS+GTPM+S LV WEHSEDWYVT+Y
Sbjct: 816 KHADNVQYFLTALGKLYEAGLNPHLANIYPHVPFPVSQGTPMLSHLVEWEHSEDWYVTSY 875
Query: 832 RMQEKLKSGERTVVVSLKDDEMEFVSGHMIDGRNLFPATGYLATV 876
+ Q+K+KSGERTV +S+ D++ EF++GH+IDGRNL+PATGYL V
Sbjct: 876 KAQDKMKSGERTVRMSIVDEDSEFMAGHVIDGRNLYPATGYLVMV 920
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307180374|gb|EFN68400.1| Fatty acid synthase [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/922 (57%), Positives = 670/922 (72%), Gaps = 84/922 (9%)
Query: 21 KAGRRLAR-PAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPE 79
K+ +R+ + P PG+EI I+GIAG FPDS ++ + L NKVDL+S D RRWKL +HPE
Sbjct: 8 KSTKRVYKVPEPGEEIVISGIAGRFPDSDNMEELKNNLLNKVDLVSGDARRWKL--DHPE 65
Query: 80 IPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTG 139
IPQRTGK+ V KFDA FFGVHFKQA TMDPMCR++LE YEA+IDAGINPK LRGS+TG
Sbjct: 66 IPQRTGKINNVGKFDALFFGVHFKQAQTMDPMCRMLLEHAYEAIIDAGINPKQLRGSRTG 125
Query: 140 VFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLY 199
VFIGA FSESEKTWFYEKLQINGFGITGCSRAMLANR+SYWLG GPSYT+DSACSSSLY
Sbjct: 126 VFIGASFSESEKTWFYEKLQINGFGITGCSRAMLANRISYWLGAIGPSYTLDSACSSSLY 185
Query: 200 ALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSE 259
ALEHAY+ ++DG C+AA VGG NLCLHPYVSLQF+RLGVLSPDGRCK FD A+GY RSE
Sbjct: 186 ALEHAYRCMQDGQCDAAIVGGSNLCLHPYVSLQFSRLGVLSPDGRCKVFDTDADGYARSE 245
Query: 260 AVCIMYLQKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKN 319
+ ++YLQK+KDAKR+YA VV+ KTNCDGYK+QGIT+PS +Q L+ + Y++C + P +
Sbjct: 246 TIAVVYLQKAKDAKRIYATVVYGKTNCDGYKKQGITFPSSEMQGMLMRECYNDCGLSPSS 305
Query: 320 LAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVIL 379
L+++E HGTG+K+GDPEE+ A+++VF R TPLLIGSVKSN+GHSEPAS +C V KV++
Sbjct: 306 LSYLECHGTGSKIGDPEEIYAIDSVFGKDRNTPLLIGSVKSNLGHSEPASSLCQVAKVLI 365
Query: 380 AM-----------------------------------ENGIIPPN--------------- 389
AM E G + N
Sbjct: 366 AMETGTIPPNLHYNRPREGVKALEEGRFKVVTETTPWEGGYVGINSFGFGGANCHVILKS 425
Query: 390 -----INFKSPRKDIPSFH--NGKIQ---------LESRPLDAEYVRLFHEIHSDDIAGH 433
IN +P D+P +G+ + +E P+D EY+RL H+IH+DDI GH
Sbjct: 426 NPKKKINNGAPSDDLPRLVIVSGRTEESVKVFLDDIERHPVDVEYIRLLHDIHTDDIQGH 485
Query: 434 MYRGYTIL-SANSDKKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEK 492
+YRGYTI+ S ++ R + +Y G RP+WFVFSGMGSQW GMG +LM P+FA ++K
Sbjct: 486 LYRGYTIVGSKTAEHPPRETENYLGTKRPIWFVFSGMGSQWPGMGIDLMRFPVFAKAVQK 545
Query: 493 LQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSV 552
+L+P+GVD+ I+T+ + FDNILNSFVGIAA+QIGLVD+L +L I PD+IIGHSV
Sbjct: 546 CDDILRPRGVDIINILTNKDKSTFDNILNSFVGIAAVQIGLVDLLTSLGIVPDNIIGHSV 605
Query: 553 GELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVAC 612
GELGCAYADG T EQ IL++Y RGLAS+ET+ I G+MAA+GLGY+D++ CP +IEVAC
Sbjct: 606 GELGCAYADGTITAEQMILSSYSRGLASIETKVIYGSMAAIGLGYEDIKDMCPSDIEVAC 665
Query: 613 HNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDD 672
HN+ DSST+SGP E++K+FVAELQ IFA+ + +N H+ R P L
Sbjct: 666 HNASDSSTLSGPAESMKEFVAELQGKKIFAKEVACSNIPYHS-----RYIAPAGSKLLAY 720
Query: 673 IRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEET 732
+ + QPKPRS KWLSTS + W+T AK SSAEYHTNNLL+PVLFEET
Sbjct: 721 LSKIIP---------QPKPRSRKWLSTSVPRSKWSTAAAKLSSAEYHTNNLLNPVLFEET 771
Query: 733 SRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGV 792
+R I K+A+T+EIAPHGLLQAILRRSL K VTN++LTQR++ ++ +LQA+GKLY +G+
Sbjct: 772 ARMIPKDAVTIEIAPHGLLQAILRRSLGKGVTNIALTQRDHRDNAEVVLQAIGKLYNNGL 831
Query: 793 HPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGERTVVVSLKDDE 852
P +ANLYP I+FPVS GTPMISP VRWEHS+DWYVTT++MQ+K+ SGER V ++L D+
Sbjct: 832 QPEIANLYPPIEFPVSCGTPMISPSVRWEHSDDWYVTTFKMQKKVISGERNVNLTLLDEN 891
Query: 853 MEFVSGHMIDGRNLFPATGYLA 874
E++SGH+I+ N PA GYLA
Sbjct: 892 YEYMSGHVINEENWIPAIGYLA 913
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322792317|gb|EFZ16301.1| hypothetical protein SINV_05241 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/930 (56%), Positives = 662/930 (71%), Gaps = 84/930 (9%)
Query: 18 LALKAGRRLARPAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEH 77
++ K R P PG+EI I+GI+G FP+S +V +F L NKVD++++DDRRW L EH
Sbjct: 1 MSAKTKRGYEVPEPGEEIVISGISGRFPESHNVEEFKNNLLNKVDMVTNDDRRWNL--EH 58
Query: 78 PEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSK 137
PEIP+ TGK+ +V KFDA FFGVHFKQAHTMDPMCR++LE YEA+IDAG+NPK LRGS+
Sbjct: 59 PEIPKGTGKINDVGKFDALFFGVHFKQAHTMDPMCRMLLEHAYEAIIDAGVNPKLLRGSR 118
Query: 138 TGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSS 197
TGVFIGACFSESEKTWFYEKLQ+NGFGITGCSRAMLANR+SYWLGV GPSY +DSACSSS
Sbjct: 119 TGVFIGACFSESEKTWFYEKLQVNGFGITGCSRAMLANRISYWLGVTGPSYALDSACSSS 178
Query: 198 LYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCR 257
L ALEHAY+S+ G C AA VGG NLCLHPYVSLQFARLGVLS DGRCK FD A+GY R
Sbjct: 179 LIALEHAYQSLIKGQCEAAIVGGSNLCLHPYVSLQFARLGVLSSDGRCKVFDNDADGYGR 238
Query: 258 SEAVCIMYLQKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDP 317
SE + ++YLQK+K AKR+YA VVH+KTNCDGYK+QG+T+PS A+Q ++++D Y C + P
Sbjct: 239 SETISVIYLQKAKHAKRIYATVVHSKTNCDGYKKQGLTFPSSAMQGKVMKDCYESCGLSP 298
Query: 318 KNLAWIEAHGTGTKVGDPEEVQALENVFC-PGRTTPLLIGSVKS---------------- 360
+L ++E HGTGTK GDPEE+ A+E VF R TPLLIGSVKS
Sbjct: 299 NDLFYLECHGTGTKTGDPEELNAIEEVFFEKDRPTPLLIGSVKSNMGHSEPAGGLCSVIK 358
Query: 361 ------------NIGHSEPASGVCSVTKVILAMENGIIPPN------------------- 389
N+ + P G ++ L + P N
Sbjct: 359 MLIAMETGIIPPNLHYKRPREGFKTLEDGRLKVVTEPTPWNGGYVGINSFGFGGSNCHVV 418
Query: 390 --------INFKSPRKDIPSFH--NGKIQ---------LESRPLDAEYVRLFHEIHSDDI 430
IN +P D+P +G+ + +E P+DAEY+RL H+IHS D+
Sbjct: 419 LKSYSKKKINNGAPSDDLPRVVTVSGRTEDSVKVFLDDIEKHPMDAEYIRLLHDIHSIDV 478
Query: 431 AGHMYRGYTIL-SANSDKKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAAT 489
GH+YRGYTI+ S ++ IR +Y G RP+WFVFSGMGSQW GMG ELM P+FA
Sbjct: 479 QGHLYRGYTIVGSKKTEHSIREIENYLGSVRPVWFVFSGMGSQWPGMGIELMRFPVFAEA 538
Query: 490 IEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIG 549
I+K AVL+P+GVD+ I+T+T+ +FDNIL+SFVGIAA+QIGLVD+L ++ I PD+IIG
Sbjct: 539 IKKCDAVLRPRGVDIINILTNTDKSIFDNILHSFVGIAAVQIGLVDLLTSIGIVPDNIIG 598
Query: 550 HSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIE 609
HSVGELGCAYADGCFT EQ IL+AY RGLAS+ETE I G+MAAVGLGY+D++ CPP+IE
Sbjct: 599 HSVGELGCAYADGCFTAEQMILSAYSRGLASIETEVIFGSMAAVGLGYEDVKDMCPPDIE 658
Query: 610 VACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWL 669
VACHNS DSSTISGP E++K+FVA+LQA IFA+ + +N H+ R P P L
Sbjct: 659 VACHNSADSSTISGPAESMKEFVAKLQAKQIFAKEVPCSNIPYHS-----RYIAPAGPKL 713
Query: 670 TDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLF 729
+ + +PKPRS KW+S+S W+T AK SSAEYHTNNLL+PVLF
Sbjct: 714 LAYLNEVIP---------EPKPRSQKWVSSSVPRNKWSTVAAKLSSAEYHTNNLLNPVLF 764
Query: 730 EETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYE 789
EET+R I K+A+T+EIAPHGLLQAILRRSL VTN++LTQR + ++V +LQA+GKLY
Sbjct: 765 EETARMIPKDAVTIEIAPHGLLQAILRRSLDTGVTNIALTQRGHKDNVEVVLQAIGKLYN 824
Query: 790 SGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGERTVVVSLK 849
+G+ P + +LYP I++PVS GTPMISP +RWEHS+DW+VT Y+ +K+ SGER + +S +
Sbjct: 825 TGLQPDIVSLYPPIEYPVSNGTPMISPSIRWEHSDDWFVTKYKAPKKITSGERIITLSRQ 884
Query: 850 DDEMEFVSGHMIDGRNLFPATGYLATVCNV 879
D+ E+++G++IDG+N+ PA GYLA V +
Sbjct: 885 DENFEYMAGYVIDGKNVIPAVGYLAFVWEI 914
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307213875|gb|EFN89136.1| Fatty acid synthase [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/915 (56%), Positives = 656/915 (71%), Gaps = 83/915 (9%)
Query: 29 PAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLY 88
P PGDEI I+GIAG FP+S +V + L NK DLI+DDDRRWKL +HP+IPQRTGK++
Sbjct: 15 PKPGDEIVISGIAGRFPESRNVETLKKNLLNKTDLITDDDRRWKL--DHPDIPQRTGKVH 72
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSE 148
+V KFDA FFGVHFKQAHTMDPMCR++LE YEA+IDAG+NPK +RG++TGVF+GACFSE
Sbjct: 73 DVGKFDALFFGVHFKQAHTMDPMCRMLLEHAYEALIDAGVNPKQVRGTRTGVFMGACFSE 132
Query: 149 SEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSI 208
SEKTWFYEKLQ+NGFGITGCSRAM+ANR+SYWLGV GPSYT+DSACSSSLYA+EHAY+ I
Sbjct: 133 SEKTWFYEKLQVNGFGITGCSRAMMANRISYWLGVTGPSYTLDSACSSSLYAVEHAYRCI 192
Query: 209 RDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268
+DG C+AA VGG NLCLHPYVSLQF+RLGVLSPDGR K FD A+GY RSEA+ ++YLQK
Sbjct: 193 QDGQCDAAIVGGANLCLHPYVSLQFSRLGVLSPDGRSKVFDIDADGYARSEAIVVLYLQK 252
Query: 269 SKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGT 328
+K+AKRVYA VV+ KTNCDG+KEQGIT+PS +Q LL + Y +C V P L+++E HGT
Sbjct: 253 AKEAKRVYATVVYGKTNCDGFKEQGITFPSSLMQSELLRECYEDCGVPPNILSYLECHGT 312
Query: 329 GTKVGDPEEVQALENVFCPGRTTPLLI----------------------------GSVKS 360
GTKVGDPEEV A++ + GR++PLLI G +
Sbjct: 313 GTKVGDPEEVNAIDKICTKGRSSPLLIGSVKSNLGHSEPASGVCQIAKVIIAMETGIIPP 372
Query: 361 NIGHSEPASGVCSVTKVILAM-------ENGIIPPN--------------------INFK 393
N+ + P GV ++ + L + E G + N IN
Sbjct: 373 NLHYKRPREGVKALEEGRLKVISEPTPWEGGYVGINSFGFGGANCHILLKSNTKEKINNG 432
Query: 394 SPRKDIPSFH--NGKIQ---------LESRPLDAEYVRLFHEIHSDDIAGHMYRGYTIL- 441
P D+ +G+ + +ES PLD EY+RL H+IHS+DI GH+YRGYTI+
Sbjct: 433 LPADDLSRLVVVSGRTEEAVKVFLDDIESNPLDCEYIRLLHDIHSEDIQGHLYRGYTIVG 492
Query: 442 SANSDKKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKG 501
S +DK R +Y G RP+WFVFSGMGSQW GMG EL++ P+ A ++K VL+P+G
Sbjct: 493 SKTTDKPPREFENYLGTARPIWFVFSGMGSQWPGMGIELLKFPVIAKAVQKCDDVLQPRG 552
Query: 502 VDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYAD 561
+D+ I+T+ + F+NILNSFVGIAA+QIGLVD+L ++ I PD+IIGHSVGELGCAYAD
Sbjct: 553 IDIYDILTNKDKSTFNNILNSFVGIAAMQIGLVDLLTSVGIVPDNIIGHSVGELGCAYAD 612
Query: 562 GCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVACHNSPDSSTI 621
GC T EQ IL+AY RGLAS+ET+ I G+MAAVG+GY+D++ CPP+IEVACHN+ DSSTI
Sbjct: 613 GCLTAEQMILSAYSRGLASIETKVIYGSMAAVGMGYEDIKHMCPPDIEVACHNASDSSTI 672
Query: 622 SGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARD 681
SGP E++K+FVA+LQA IFA+ + +N H+ R P P L A M
Sbjct: 673 SGPAESMKEFVAQLQAKKIFAKEVLCSNIPYHS-----RYIAPAGPKLL----AYMN--- 720
Query: 682 RAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAI 741
V QPKPRS KW+STS + W+T AK SSAEYHTNNLLSPVLFEET+R I K+A+
Sbjct: 721 --EVIPQPKPRSRKWVSTSVPRSKWSTASAKLSSAEYHTNNLLSPVLFEETARMIPKDAV 778
Query: 742 TLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLYP 801
+EIAPHGLLQAILRRSL VTN++L QR + ++ LQA+GKLY G+ P++A+LYP
Sbjct: 779 CIEIAPHGLLQAILRRSLGSNVTNIALAQRGHKDNSEVFLQAIGKLYNIGLQPNIASLYP 838
Query: 802 KIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGERTVVVSLKDDEMEFVSGHMI 861
++FPVSRGTP IS VRW+HS+DWYVTTY+ Q+K+ SGER + SLKD++ ++V GH+I
Sbjct: 839 PVEFPVSRGTPTISSSVRWQHSDDWYVTTYKSQKKITSGERIIEFSLKDEDNDYVVGHII 898
Query: 862 DGRNLFPATGYLATV 876
DG+ L PA YL V
Sbjct: 899 DGKVLMPAMSYLILV 913
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350407733|ref|XP_003488176.1| PREDICTED: fatty acid synthase-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/913 (54%), Positives = 637/913 (69%), Gaps = 83/913 (9%)
Query: 31 PGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEV 90
PG+E+ ITGI+G FP+S ++ + L NKVDLI+++ RW+ ++H EIP+ GKL +
Sbjct: 19 PGEEVVITGISGRFPESNNIIELKNNLMNKVDLITENYSRWR--QDHAEIPKAGGKLSGL 76
Query: 91 NKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESE 150
+KFDA FFGVH+KQAHT+DPMCRI+LE YEA++DAG+NP+ L+G+ T V IG+C SESE
Sbjct: 77 SKFDAIFFGVHYKQAHTLDPMCRILLENAYEAIVDAGLNPRQLKGTNTAVVIGSCISESE 136
Query: 151 KTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRD 210
KTWFYEKLQ NGFGITGCSRAMLANR+SY+ G++GPSY +D+ACSSSL AL+ AY+ IR
Sbjct: 137 KTWFYEKLQANGFGITGCSRAMLANRISYFFGLHGPSYAIDTACSSSLIALDQAYRLIRT 196
Query: 211 GHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270
G C VG NLCLHPYVSLQFARLGVLS D CKSFD ANGY RSEA+ ++ LQK+K
Sbjct: 197 GVCETVIVGASNLCLHPYVSLQFARLGVLSADCHCKSFDARANGYVRSEAISVIILQKAK 256
Query: 271 DAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330
+AKR+YA+VV+ K+NCDGYKEQGIT+P+ +Q+ LL DFY EC++ P LA++EAHGTGT
Sbjct: 257 NAKRIYAQVVYTKSNCDGYKEQGITFPASNVQKMLLTDFYKECKISPNELAFLEAHGTGT 316
Query: 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKS----------------------------NI 362
VGDPEE+ A++ VFC RTTPL IGS+KS NI
Sbjct: 317 SVGDPEELNAIDKVFCQNRTTPLKIGSIKSNMGHTEPASGLCSVAKIVIAMESGLIPPNI 376
Query: 363 GHSEPASGVCSVT--KVILAME-----NGIIPPN--------------------INFKSP 395
P GV KV + E G + N +N +P
Sbjct: 377 NFKSPMKGVTCFDEGKVEVVTEPTPWKGGYVGINSFGFGGANAHVLLKSYTKEKVNNGAP 436
Query: 396 RKDIPSFH--NGKIQ---------LESRPLDAEYVRLFHEIHSDDIAGHMYRGYTIL-SA 443
D+P +G+ Q +ES P+D EY+RL H+IHS++I GH++RGYTI+ S
Sbjct: 437 SDDLPRLVVVSGRTQEAVETLLNHIESIPVDVEYIRLLHDIHSENITGHLFRGYTIVGSK 496
Query: 444 NSDKKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVD 503
S+K R Y G RP+WFVFSGMGSQW GMG LM PIFA ++K VLKP G+D
Sbjct: 497 TSEKPPRDIQEYSGIKRPIWFVFSGMGSQWPGMGESLMRFPIFAKAVQKCDTVLKPHGID 556
Query: 504 VKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGC 563
+ IIT+ + K FDNILNSFVGIA IQIGLVD+L ++ I PD+IIGHSVGELGCAYADGC
Sbjct: 557 IVNIITNKDKKTFDNILNSFVGIAVIQIGLVDLLTSVGIEPDNIIGHSVGELGCAYADGC 616
Query: 564 FTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVACHNSPDSSTISG 623
FT EQ +LAAY RGLAS+ET+ IRG+MAAVGLGY++++ CP +IEVACHNS DS TISG
Sbjct: 617 FTAEQMVLAAYSRGLASIETKMIRGSMAAVGLGYEEIKDICPSDIEVACHNSSDSCTISG 676
Query: 624 PEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRA 683
P E++K+FVA+LQA+ IFA+ + +N H+ R P L ++ +
Sbjct: 677 PAESMKQFVAQLQANKIFAKEVACSNIAYHS-----RYIADAGPRLLSYLKKVIP----- 726
Query: 684 HVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAITL 743
+P+ RS+KW+STS + W T AKYSSAEYHTNNLLS VLF ET+ I +AIT+
Sbjct: 727 ----KPQARSSKWMSTSVPRSQWYTEAAKYSSAEYHTNNLLSSVLFAETATMIPSDAITI 782
Query: 744 EIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLYPKI 803
EIAPHGLLQAIL+RSL ++VTN++LTQR + ++ LQALGKLY+ G+ P LAN+YP +
Sbjct: 783 EIAPHGLLQAILKRSLSQSVTNIALTQRGHKDNAECFLQALGKLYDVGLQPQLANIYPHV 842
Query: 804 DFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGERTVVVSLKDDEMEFVSGHMIDG 863
+FPVSRGT M+SP +RWEHSEDW+V Y ++K+ + ER + V+LKD+ E++ H+IDG
Sbjct: 843 EFPVSRGTSMVSPYIRWEHSEDWFVPVYTQRQKITTAERMIDVALKDENYEYIMHHVIDG 902
Query: 864 RNLFPATGYLATV 876
RNL PATGYL V
Sbjct: 903 RNLVPATGYLIMV 915
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383856217|ref|XP_003703606.1| PREDICTED: fatty acid synthase-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/917 (54%), Positives = 641/917 (69%), Gaps = 83/917 (9%)
Query: 27 ARPAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGK 86
A PG+E+ ITGIAG FP+S +V++ E L +K DLI+ + RW+L H EIP+ GK
Sbjct: 15 AATEPGEEVVITGIAGRFPESDNVKELEENLMSKKDLITSNYSRWRL--VHAEIPRDGGK 72
Query: 87 LYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACF 146
+ ++KFDA FFGVH+KQAHT+DPMCR++LE +YEA+IDAGINP+ LRG+ TGV +G+C
Sbjct: 73 VNGLSKFDAIFFGVHYKQAHTLDPMCRMLLEHSYEALIDAGINPRQLRGTNTGVIVGSCI 132
Query: 147 SESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYK 206
SESEKTWFYEKLQ NGFGITGCSRAM ANR+SY+LG++GPSY +D+ACSSSLYAL+H Y+
Sbjct: 133 SESEKTWFYEKLQANGFGITGCSRAMYANRISYFLGLHGPSYAIDTACSSSLYALDHGYR 192
Query: 207 SIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYL 266
IR+G C+ VGG NLCLHPYVSLQF+RLGVLS D RCK+FD +ANGY RSEA+ ++ L
Sbjct: 193 MIRNGICDTVIVGGSNLCLHPYVSLQFSRLGVLSNDCRCKTFDASANGYVRSEAITVVIL 252
Query: 267 QKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326
QK+K AKR+Y +VVH KTNCDGYKEQGIT+PS +Q+ LL DFYSEC++ P L+++EAH
Sbjct: 253 QKAKHAKRIYCQVVHTKTNCDGYKEQGITFPSSEVQKMLLSDFYSECKMSPTILSYLEAH 312
Query: 327 GTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKS-------------------------- 360
GTGT VGDPEE+ A+ +FC GR TPL IGS+KS
Sbjct: 313 GTGTSVGDPEELNAINTIFCEGRKTPLKIGSIKSNMGHTEPASGLCSVAKMVIAMESGII 372
Query: 361 --NIGHSEPASGVCSV----TKVILA---MENGIIPPN--------------------IN 391
N+ + P GV + +VI E G + N +N
Sbjct: 373 PPNLHYKNPIKGVKCLEEGKVQVITEPTPWEGGYVGINSFGFGGANAHVLLKSYTKEKVN 432
Query: 392 FKSPRKDIPSF--HNGKIQ---------LESRPLDAEYVRLFHEIHSDDIAGHMYRGYTI 440
+P D+P +G+ + +ES P+D EY+RL HE+++ +I+GH+ RGYT+
Sbjct: 433 NGAPFDDLPRLVTASGRNEEALKILFDYIESIPVDVEYIRLLHEVYAKNISGHLSRGYTV 492
Query: 441 L-SANSDKKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKP 499
+ S SDK IR Y G RP+WFVFSGMGSQW GMG LM PIFA I+K A LKP
Sbjct: 493 VGSKTSDKPIREMQEYQGSKRPIWFVFSGMGSQWPGMGEALMRFPIFAQAIQKCDAALKP 552
Query: 500 KGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAY 559
GVD+ IIT+ + K+FDNI+N FVGIAAIQIGLVD+L A+ I PD+IIGHSVGELGCAY
Sbjct: 553 HGVDIIDIITNKDKKIFDNIVNCFVGIAAIQIGLVDLLTAVGIEPDNIIGHSVGELGCAY 612
Query: 560 ADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVACHNSPDSS 619
ADGCFT EQ +L+AY RGL S ET+ IRG+MAAVGLGY+D++ CPP+IEVACHN PDS
Sbjct: 613 ADGCFTAEQMVLSAYSRGLVSKETKMIRGSMAAVGLGYEDIKDMCPPDIEVACHNGPDSC 672
Query: 620 TISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKA 679
TISGP E++K+FVA+LQA+N+FA+ + N H+ R P L ++ +
Sbjct: 673 TISGPAESMKEFVAKLQANNVFAKEVQCGNIAYHS-----RYIAEAGPKLLAYLKKVIP- 726
Query: 680 RDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN 739
+ K RS+KWLSTS W++ AKYSSAEYHTNNLL+ VLF ET+ I +
Sbjct: 727 --------ESKLRSSKWLSTSVPRNQWSSPAAKYSSAEYHTNNLLNSVLFAETATMIPND 778
Query: 740 AITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANL 799
AI +EIAPHGLLQAIL+RSL V NV LT R + ++ + L+ALGKLY +G+ P LAN+
Sbjct: 779 AIAIEIAPHGLLQAILKRSLDPNVINVPLTLRGHKDNAEFFLRALGKLYNAGLQPQLANI 838
Query: 800 YPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGERTVVVSLKDDEMEFVSGH 859
YP ++FPVSRGTPMISP ++WEHS+DW+V Y ++K+ + ERTV ++LKD+ E++ H
Sbjct: 839 YPHVEFPVSRGTPMISPYIKWEHSDDWFVPVYTQRQKITTTERTVAIALKDENYEYMMHH 898
Query: 860 MIDGRNLFPATGYLATV 876
+IDGRNL PATGYL V
Sbjct: 899 VIDGRNLIPATGYLILV 915
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 883 | ||||||
| FB|FBgn0040001 | 2394 | CG17374 [Drosophila melanogast | 0.437 | 0.161 | 0.584 | 1.5e-248 | |
| FB|FBgn0027571 | 2544 | CG3523 [Drosophila melanogaste | 0.456 | 0.158 | 0.504 | 4.7e-222 | |
| UNIPROTKB|F1N8A8 | 2512 | FASN "Fatty acid synthase" [Ga | 0.429 | 0.150 | 0.540 | 1.8e-208 | |
| UNIPROTKB|E1BW07 | 2513 | FASN "Fatty acid synthase" [Ga | 0.429 | 0.150 | 0.540 | 1.8e-208 | |
| UNIPROTKB|P12276 | 2512 | FASN "Fatty acid synthase" [Ga | 0.429 | 0.150 | 0.540 | 3.8e-208 | |
| ZFIN|ZDB-GENE-030131-7802 | 2514 | fasn "fatty acid synthase" [Da | 0.431 | 0.151 | 0.530 | 1.6e-206 | |
| RGD|620665 | 2505 | Fasn "fatty acid synthase" [Ra | 0.430 | 0.151 | 0.513 | 3.3e-201 | |
| UNIPROTKB|P12785 | 2505 | Fasn "Fatty acid synthase" [Ra | 0.430 | 0.151 | 0.513 | 3.3e-201 | |
| UNIPROTKB|P49327 | 2511 | FASN "Fatty acid synthase" [Ho | 0.430 | 0.151 | 0.502 | 1e-199 | |
| UNIPROTKB|I3LC73 | 1375 | FASN "Uncharacterized protein" | 0.430 | 0.276 | 0.502 | 2.2e-198 |
| FB|FBgn0040001 CG17374 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1272 (452.8 bits), Expect = 1.5e-248, Sum P(2) = 1.5e-248
Identities = 228/390 (58%), Positives = 305/390 (78%)
Query: 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVN 91
GD+I I+G+AG FP+ ++ ++ KL NK+D++ DD+RRW+ +PEIP+R+GK+ ++
Sbjct: 18 GDDIVISGMAGKFPNCRNITEYQYKLYNKIDMVDDDERRWR--HFNPEIPKRSGKICDLE 75
Query: 92 KFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEK 151
KFDA FFGVHFKQAHTMDP RI++E YEAVID+G+NPKSLRGSKTGV+IG+C SESEK
Sbjct: 76 KFDATFFGVHFKQAHTMDPQTRILIETAYEAVIDSGVNPKSLRGSKTGVYIGSCISESEK 135
Query: 152 TWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDG 211
TWFYEK+ GFGITGCSRAM+ANR+SY LG+ GPS+ +D+ACSSS+YAL++A+ +IR+G
Sbjct: 136 TWFYEKVSSGGFGITGCSRAMMANRISYCLGLEGPSFLLDTACSSSMYALDNAFSAIRNG 195
Query: 212 HCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKD 271
+AA +GG NL LHP+V+LQFARLGVL+PDG C+ FD+ A+GY RSE + ++LQK K
Sbjct: 196 EIDAAIIGGSNLLLHPFVTLQFARLGVLAPDGFCRPFDKNASGYTRSETINCLFLQKKKH 255
Query: 272 AKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTK 331
AKRVYA +V++KTNCDGYK +GITYPSG +Q++LL+ FY + + P +L ++EAH TGT
Sbjct: 256 AKRVYASIVYSKTNCDGYKPEGITYPSGIVQEKLLDQFYKDIDHKPSDLGYLEAHSTGTV 315
Query: 332 VGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNIN 391
VGDPEE +A++NV C R PLL+GSVKSN+GHSE ASG+CS+ K A E G+I PNIN
Sbjct: 316 VGDPEECKAIDNVLCSQREEPLLVGSVKSNVGHSEAASGICSLVKACFAFETGLIAPNIN 375
Query: 392 FKSPRKDIPSFHNGKIQL--ESRPLDAEYV 419
F ++ I G++ + + PL Y+
Sbjct: 376 FTEVKQIIAPLAEGRLIVVKDVVPLPKPYI 405
|
|
| FB|FBgn0027571 CG3523 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1114 (397.2 bits), Expect = 4.7e-222, Sum P(2) = 4.7e-222
Identities = 206/408 (50%), Positives = 291/408 (71%)
Query: 10 PAKLTSKELALKAGRRLARPAP-GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDD 68
PA+ + +L L G + R DEI ITG +G P+S+ + +F + L + VD+++DD
Sbjct: 120 PAQRAAPQLDLGGGHYVPRQQHLNDEIAITGFSGRLPESSTIEEFKQNLFDGVDMVNDDP 179
Query: 69 RRWKLGKEHPEIPQRTGKLYE--VNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDA 126
RRW+ G +P R GKL + + FD FFGVH KQA MDP+ R++LE T+EA+IDA
Sbjct: 180 RRWERGLYG--LPDRIGKLKDSDLENFDQQFFGVHQKQAECMDPLLRMLLELTHEAIIDA 237
Query: 127 GINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGP 186
G+NP LRGS+TGV+IG SE+E+ W + ++NG+G+TGC+RAM ANR+S+ GP
Sbjct: 238 GLNPSDLRGSRTGVYIGVSNSETEQHWCSDADRVNGYGLTGCARAMFANRISFTFDFKGP 297
Query: 187 SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCK 246
SY++D+ACSSSLYALE A+ +R+G + A V G L L P +SLQF RL +LSPDG CK
Sbjct: 298 SYSIDTACSSSLYALEQAFSDMREGKVDNALVAGAGLILKPTMSLQFKRLNMLSPDGSCK 357
Query: 247 SFDEAANGYCRSEAVCIMYLQKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLL 306
+FDE+ NGY RS+ ++ LQ++ A+RVYA +++ +TN DG+KEQGITYP G +Q RL+
Sbjct: 358 AFDESGNGYVRSDGCVVLLLQRTSAARRVYASILNVRTNTDGFKEQGITYPIGKMQNRLI 417
Query: 307 EDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSE 366
+ Y E ++P ++ ++EAHGTGTKVGDP+EV ++ + FC RTTPLLIGSVKSN+GHSE
Sbjct: 418 RETYEEIGLNPADVVYVEAHGTGTKVGDPQEVNSITDFFCKDRTTPLLIGSVKSNMGHSE 477
Query: 367 PASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLESRPL 414
PASGVCSV K+++AME G+IP N+++ P D+ +G++++ R L
Sbjct: 478 PASGVCSVAKILIAMEEGVIPGNLHYNKPNPDLYGLVDGRLKVVDRNL 525
|
|
| UNIPROTKB|F1N8A8 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1139 (406.0 bits), Expect = 1.8e-208, Sum P(2) = 1.8e-208
Identities = 206/381 (54%), Positives = 286/381 (75%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+++ I GIAG P+S ++++F E L N VD++++DDRRWK G +P+R GKL ++ K
Sbjct: 2 EDVVIAGIAGKLPESENLQEFWENLLNGVDMVTEDDRRWKPGIYG--LPKRNGKLKDIKK 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE +YEA++D GINP +LRG+ TGV++GA SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVSYEAILDGGINPTALRGTDTGVWVGASGSEAAEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ ++ G+ +TGC RAMLANR+SY+ GPS T+D+ACSSSL ALE+AYK+IR G
Sbjct: 120 LSQDPEELLGYSMTGCQRAMLANRISYFYDFTGPSLTIDTACSSSLMALENAYKAIRHGQ 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C+AA VGG N+ L P S+QF +LG+LSPDG CK+FD + NGYCRSEAV ++ L K A
Sbjct: 180 CSAALVGGVNILLKPNTSVQFMKLGMLSPDGACKAFDVSGNGYCRSEAVVVVLLTKKSMA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
KRVYA +V+A +N DG+KEQG+T+PSG +QQ+L+ Y EC + P ++ ++EAHGTGTKV
Sbjct: 240 KRVYATIVNAGSNTDGFKEQGVTFPSGEMQQQLVGSLYRECGIKPGDVEYVEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+EV + NVFC PLLIGS KSN+GH EPASG+ ++ KVIL++E+G+ PN++F
Sbjct: 300 GDPQEVNGIVNVFCQCEREPLLIGSTKSNMGHPEPASGLAALAKVILSLEHGLWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRP 413
P DIP+ H+G +++ +P
Sbjct: 360 NDPNPDIPALHDGSLKVVCKP 380
|
|
| UNIPROTKB|E1BW07 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1139 (406.0 bits), Expect = 1.8e-208, Sum P(2) = 1.8e-208
Identities = 206/381 (54%), Positives = 286/381 (75%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+++ I GIAG P+S ++++F E L N VD++++DDRRWK G +P+R GKL ++ K
Sbjct: 2 EDVVIAGIAGKLPESENLQEFWENLLNGVDMVTEDDRRWKPGIYG--LPKRNGKLKDIKK 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE +YEA++D GINP +LRG+ TGV++GA SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVSYEAILDGGINPTALRGTDTGVWVGASGSEAAEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ ++ G+ +TGC RAMLANR+SY+ GPS T+D+ACSSSL ALE+AYK+IR G
Sbjct: 120 LSQDPEELLGYSMTGCQRAMLANRISYFYDFTGPSLTIDTACSSSLMALENAYKAIRHGQ 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C+AA VGG N+ L P S+QF +LG+LSPDG CK+FD + NGYCRSEAV ++ L K A
Sbjct: 180 CSAALVGGVNILLKPNTSVQFMKLGMLSPDGACKAFDVSGNGYCRSEAVVVVLLTKKSMA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
KRVYA +V+A +N DG+KEQG+T+PSG +QQ+L+ Y EC + P ++ ++EAHGTGTKV
Sbjct: 240 KRVYATIVNAGSNTDGFKEQGVTFPSGEMQQQLVGSLYRECGIKPGDVEYVEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+EV + NVFC PLLIGS KSN+GH EPASG+ ++ KVIL++E+G+ PN++F
Sbjct: 300 GDPQEVNGIVNVFCQCEREPLLIGSTKSNMGHPEPASGLAALAKVILSLEHGLWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRP 413
P DIP+ H+G +++ +P
Sbjct: 360 NDPNPDIPALHDGSLKVVCKP 380
|
|
| UNIPROTKB|P12276 FASN "Fatty acid synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1137 (405.3 bits), Expect = 3.8e-208, Sum P(2) = 3.8e-208
Identities = 206/381 (54%), Positives = 286/381 (75%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+++ I GIAG P+S ++++F E L N VD++++DDRRWK G +P+R GKL ++ K
Sbjct: 2 EDVVIAGIAGKLPESENLQEFWENLLNGVDMVTEDDRRWKPGIYG--LPKRNGKLKDIKK 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE +YEA++D GINP +LRG+ TGV++GA SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVSYEAILDGGINPTALRGTDTGVWVGASGSEALEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ ++ G+ +TGC RAMLANR+SY+ GPS T+D+ACSSSL ALE+AYK+IR G
Sbjct: 120 LSQDPEELLGYSMTGCQRAMLANRISYFYDFTGPSLTIDTACSSSLMALENAYKAIRHGQ 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C+AA VGG N+ L P S+QF +LG+LSPDG CK+FD + NGYCRSEAV ++ L K A
Sbjct: 180 CSAALVGGVNILLKPNTSVQFMKLGMLSPDGACKAFDVSGNGYCRSEAVVVVLLTKKSMA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
KRVYA +V+A +N DG+KEQG+T+PSG +QQ+L+ Y EC + P ++ ++EAHGTGTKV
Sbjct: 240 KRVYATIVNAGSNTDGFKEQGVTFPSGEMQQQLVGSLYRECGIKPGDVEYVEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+EV + NVFC PLLIGS KSN+GH EPASG+ ++ KVIL++E+G+ PN++F
Sbjct: 300 GDPQEVNGIVNVFCQCEREPLLIGSTKSNMGHPEPASGLAALAKVILSLEHGLWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRP 413
P DIP+ H+G +++ +P
Sbjct: 360 NDPNPDIPALHDGSLKVVCKP 380
|
|
| ZFIN|ZDB-GENE-030131-7802 fasn "fatty acid synthase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1117 (398.3 bits), Expect = 1.6e-206, Sum P(2) = 1.6e-206
Identities = 202/381 (53%), Positives = 281/381 (73%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
++I I GI+G P+S ++ +F + L N VD++++DDRRWK +P+R GKL E+++
Sbjct: 2 EDIVIAGISGRLPESNNLEEFWQNLFNGVDMVTEDDRRWKPVLGLYGLPRRNGKLKEIDR 61
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDAAFFGVH KQAHTMDP R++LE +YEA++D GINP S+RGSKTGV+IG SE+ +
Sbjct: 62 FDAAFFGVHPKQAHTMDPQLRLMLEISYEAIVDGGINPVSMRGSKTGVYIGVSGSEAGEA 121
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + ++ G+ +TGC RAM ANR+SY+ NGPS +D+ACSSSL ALE+A+ +IR G
Sbjct: 122 FSKDPEELLGYSMTGCQRAMFANRLSYFFDFNGPSTAIDTACSSSLLALENAFNAIRHGK 181
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C+AA +GG NL L P S+QF +LG+LSP+G CKSFD + NGYCRSEA + L K A
Sbjct: 182 CDAALIGGVNLLLKPNTSVQFMKLGMLSPEGTCKSFDASGNGYCRSEAAVAVLLTKKSMA 241
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
KR+YA V++A N DGYKEQG+T+PSG +QQRL+ Y E + P+ + +IEAHGTGTKV
Sbjct: 242 KRIYATVLNAGNNTDGYKEQGVTFPSGEMQQRLVRSLYQEANISPEQVEYIEAHGTGTKV 301
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+EV + +VFC + PLLIGS KSN+GH EPASG+ ++ KV+L++E+G+ PN++F
Sbjct: 302 GDPQEVNGIVSVFCQSQRDPLLIGSTKSNMGHPEPASGLAALAKVVLSLEHGVWAPNVHF 361
Query: 393 KSPRKDIPSFHNGKIQLESRP 413
P DIP+ +G++ + S+P
Sbjct: 362 NEPNPDIPALTDGRLCVVSKP 382
|
|
| RGD|620665 Fasn "fatty acid synthase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1074 (383.1 bits), Expect = 3.3e-201, Sum P(2) = 3.3e-201
Identities = 196/382 (51%), Positives = 280/382 (73%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+E+ I G++G P+S ++++F L VD+++DDDRRWK G +P+R+GKL +++K
Sbjct: 2 EEVVIAGMSGKLPESENLQEFWANLIGGVDMVTDDDRRWKAGLYG--LPKRSGKLKDLSK 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE +YEA++D GINP SLRG+ TGV++G SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVSYEAIVDGGINPASLRGTNTGVWVGVSGSEASEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + G+ + GC RAM+ANR+S++ GPS +D+ACSSSL AL++AY++IR G
Sbjct: 120 LSRDPETLLGYSMVGCQRAMMANRLSFFFDFKGPSIALDTACSSSLLALQNAYQAIRSGE 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C AA VGG NL L P S+QF +LG+LSPDG C+SFD++ NGYCR+EAV + L K A
Sbjct: 180 CPAAIVGGINLLLKPNTSVQFMKLGMLSPDGTCRSFDDSGNGYCRAEAVVAVLLTKKSLA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
+RVYA +++A TN DG KEQG+T+PSG Q++L+ Y V P++L +IEAHGTGTKV
Sbjct: 240 RRVYATILNAGTNTDGCKEQGVTFPSGEAQEQLIRSLYQPGGVAPESLEYIEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+E+ + C R +PLLIGS KSN+GH EPASG+ ++TKV+L++ENG+ PN++F
Sbjct: 300 GDPQELNGITRSLCAFRQSPLLIGSTKSNMGHPEPASGLAALTKVLLSLENGVWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRPL 414
+P +IP+ +G++Q+ RPL
Sbjct: 360 HNPNPEIPALLDGRLQVVDRPL 381
|
|
| UNIPROTKB|P12785 Fasn "Fatty acid synthase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1074 (383.1 bits), Expect = 3.3e-201, Sum P(2) = 3.3e-201
Identities = 196/382 (51%), Positives = 280/382 (73%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+E+ I G++G P+S ++++F L VD+++DDDRRWK G +P+R+GKL +++K
Sbjct: 2 EEVVIAGMSGKLPESENLQEFWANLIGGVDMVTDDDRRWKAGLYG--LPKRSGKLKDLSK 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE +YEA++D GINP SLRG+ TGV++G SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVSYEAIVDGGINPASLRGTNTGVWVGVSGSEASEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + G+ + GC RAM+ANR+S++ GPS +D+ACSSSL AL++AY++IR G
Sbjct: 120 LSRDPETLLGYSMVGCQRAMMANRLSFFFDFKGPSIALDTACSSSLLALQNAYQAIRSGE 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C AA VGG NL L P S+QF +LG+LSPDG C+SFD++ NGYCR+EAV + L K A
Sbjct: 180 CPAAIVGGINLLLKPNTSVQFMKLGMLSPDGTCRSFDDSGNGYCRAEAVVAVLLTKKSLA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
+RVYA +++A TN DG KEQG+T+PSG Q++L+ Y V P++L +IEAHGTGTKV
Sbjct: 240 RRVYATILNAGTNTDGCKEQGVTFPSGEAQEQLIRSLYQPGGVAPESLEYIEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+E+ + C R +PLLIGS KSN+GH EPASG+ ++TKV+L++ENG+ PN++F
Sbjct: 300 GDPQELNGITRSLCAFRQSPLLIGSTKSNMGHPEPASGLAALTKVLLSLENGVWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRPL 414
+P +IP+ +G++Q+ RPL
Sbjct: 360 HNPNPEIPALLDGRLQVVDRPL 381
|
|
| UNIPROTKB|P49327 FASN "Fatty acid synthase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1063 (379.3 bits), Expect = 1.0e-199, Sum P(2) = 1.0e-199
Identities = 192/382 (50%), Positives = 277/382 (72%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+E+ I G++G P+S ++++F + L VD+++DDDRRWK G +P+R+GKL ++++
Sbjct: 2 EEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYG--LPRRSGKLKDLSR 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQAHTMDP R++LE TYEA++D GINP SLRG+ TGV++G SE+ +
Sbjct: 60 FDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + G+ + GC RAM+ANR+S++ GPS +D+ACSSSL AL++AY++I G
Sbjct: 120 LSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIHSGQ 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C AA VGG N+ L P S+QF RLG+LSP+G CK+FD A NGYCRSE V + L K A
Sbjct: 180 CPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLTKKSLA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
+RVYA +++A TN DG+KEQG+T+PSG +Q++L+ Y V P++ +IEAHGTGTKV
Sbjct: 240 RRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+E+ + C R PLLIGS KSN+GH EPASG+ ++ KV+L++E+G+ PN++F
Sbjct: 300 GDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHF 359
Query: 393 KSPRKDIPSFHNGKIQLESRPL 414
SP +IP+ +G++Q+ +PL
Sbjct: 360 HSPNPEIPALLDGRLQVVDQPL 381
|
|
| UNIPROTKB|I3LC73 FASN "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 2.2e-198, Sum P(2) = 2.2e-198
Identities = 192/382 (50%), Positives = 275/382 (71%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+E+ I G++G P+S ++ +F L VD+++ DDRRWK G +P+R GKL ++++
Sbjct: 2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYG--LPRRMGKLKDLSR 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQA+TMDP R++LE TYEA++D GINP SLRG+ TGV++G S++ +
Sbjct: 60 FDASFFGVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + G+ + GC RAM+ANRVS++ GPS T+D+ACSSSL AL+ AY++IR G
Sbjct: 120 LSRDPETLVGYSMIGCQRAMMANRVSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGE 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C+AA VGG N+ L P SLQF +LG+LS DG C+SFD GYCR+EAV + L K A
Sbjct: 180 CSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
+RVYA +++A TN DG KEQG+T+PSG +Q++L+ Y+ DP++L +IEAHGTGTKV
Sbjct: 240 RRVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+E+ + N C R PLLIGS KSN+GH EPASGV ++ KV+L++E+G+ PN+++
Sbjct: 300 GDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHY 359
Query: 393 KSPRKDIPSFHNGKIQLESRPL 414
+P +IP+ +G++Q+ RPL
Sbjct: 360 HTPNPEIPALQDGRLQVVDRPL 381
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P12785 | FAS_RAT | 3, ., 1, ., 2, ., 1, 4 | 0.5130 | 0.4303 | 0.1516 | yes | N/A |
| P19096 | FAS_MOUSE | 3, ., 1, ., 2, ., 1, 4 | 0.5078 | 0.4303 | 0.1517 | yes | N/A |
| P49327 | FAS_HUMAN | 3, ., 1, ., 2, ., 1, 4 | 0.5026 | 0.4303 | 0.1513 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.3.1.39 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 883 | |||
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 1e-153 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 1e-99 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 3e-99 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 4e-71 | |
| pfam00698 | 319 | pfam00698, Acyl_transf_1, Acyl transferase domain | 6e-61 | |
| smart00827 | 298 | smart00827, PKS_AT, Acyl transferase domain in pol | 2e-56 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 1e-47 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 4e-45 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 2e-42 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 3e-36 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 2e-34 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 3e-33 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 7e-32 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 7e-30 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 1e-28 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 2e-26 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 8e-26 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 1e-22 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 2e-22 | |
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 2e-21 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 3e-20 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 3e-19 | |
| COG0331 | 310 | COG0331, FabD, (acyl-carrier-protein) S-malonyltra | 7e-19 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 2e-18 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 3e-18 | |
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 1e-16 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 5e-16 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 6e-16 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 1e-15 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 2e-14 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 4e-13 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 6e-10 | |
| TIGR00128 | 290 | TIGR00128, fabD, malonyl CoA-acyl carrier protein | 7e-10 | |
| TIGR03131 | 295 | TIGR03131, malonate_mdcH, malonate decarboxylase, | 4e-08 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 2e-07 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 7e-04 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 0.003 | |
| COG0332 | 323 | COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | 0.004 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 0.004 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 457 bits (1177), Expect = e-153
Identities = 178/396 (44%), Positives = 248/396 (62%), Gaps = 16/396 (4%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDD-DRRW-------KLGKEHPEIPQRT 84
+ I I G+A FP + D +F E L D IS+ + RW GK +R
Sbjct: 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRG 60
Query: 85 GKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA 144
G L +V+ FDAAFFG+ ++A MDP R++LE +EA+ DAG +P+SL GS+TGVF+GA
Sbjct: 61 GFLDDVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGA 120
Query: 145 CFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHA 204
S+ + + +I+ + TG SRA LANR+SY+ + GPS TVD+ACSSSL AL A
Sbjct: 121 SSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTACSSSLVALHLA 180
Query: 205 YKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIM 264
+S+R G C+ A VGG NL L P + + F++ G+LSPDGRC+ FD A+GY R E V ++
Sbjct: 181 CQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240
Query: 265 YLQKSKDAKR----VYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNL 320
L++ DA R +YA + + N DG +GIT PSG Q L+ Y+ VDP ++
Sbjct: 241 VLKRLSDALRDGDRIYAVIRGSAVNQDGRT-KGITAPSGEAQAALIRRAYARAGVDPSDI 299
Query: 321 AWIEAHGTGTKVGDPEEVQALENVFCPGR--TTPLLIGSVKSNIGHSEPASGVCSVTKVI 378
++EAHGTGT +GDP EV+AL VF R PLLIGSVKSNIGH E A+G+ + KV+
Sbjct: 300 DYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVV 359
Query: 379 LAMENGIIPPNINFKSPRKDIPSFH-NGKIQLESRP 413
LA+E+G+IPPN++F++P I ++ E+RP
Sbjct: 360 LALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARP 395
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 312 bits (802), Expect = 1e-99
Identities = 133/384 (34%), Positives = 179/384 (46%), Gaps = 126/384 (32%)
Query: 35 ICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFD 94
I I G++ FP + D +F W L L +V+ FD
Sbjct: 1 IAIVGMSCRFPGADDPEEF-----------------WDLLLA---------GLDDVDLFD 34
Query: 95 AAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF 154
AAFFG+ ++A MDP R++LE +EA+ DAGI+P+SLRGS+TGVF+G S+
Sbjct: 35 AAFFGISPREAEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGVSSSD------ 88
Query: 155 YEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCN 214
Y S TVD+ACSSSL AL A +S+R G C+
Sbjct: 89 Y-------------------------------SVTVDTACSSSLVALHLACQSLRSGECD 117
Query: 215 AAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKR 274
A GG NL L P + +R G+LSPDGRCK+FD +A+GY R E V ++ L++ DA R
Sbjct: 118 MALAGGVNLILSPDTFVGLSRAGMLSPDGRCKTFDASADGYVRGEGVGVVVLKRLSDALR 177
Query: 275 ----VYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330
+ A + + N DG GIT PSG Q
Sbjct: 178 DGDPILAVIRGSAVNQDGRSN-GITAPSGPAQ---------------------------- 208
Query: 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNI 390
LLIGSVKSNIGH E A+GV + KV+LA+++G+IPP +
Sbjct: 209 ----------------------LLIGSVKSNIGHLEAAAGVAGLIKVVLALKHGVIPPTL 246
Query: 391 NFKSPRKDIPSFHNGKIQLESRPL 414
+F++P N I LE PL
Sbjct: 247 HFETP--------NPHIDLEESPL 262
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = 3e-99
Identities = 156/399 (39%), Positives = 224/399 (56%), Gaps = 23/399 (5%)
Query: 30 APGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISD-DDRRWKL--------GKEHPEI 80
+ I I G+A FP + +F + L D I++ RW +
Sbjct: 1 QLIEPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSY 60
Query: 81 PQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGV 140
+ G L +V+ FDA FFG+ ++A MDP R++LE +EA+ DAGI P SLRGS TGV
Sbjct: 61 SRWGGFLDDVDDFDALFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGV 120
Query: 141 FIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYA 200
F GA ++ + + ITG S ++ A R+SY LG++GPS TVD+ACSSSL A
Sbjct: 121 FAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGPSVTVDTACSSSLVA 180
Query: 201 LEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEA 260
+ A +S+R G C+ A GG NL L P S F+ G+LSPDGRCK+FD A+GY R E
Sbjct: 181 VHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEG 240
Query: 261 VCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVD 316
++ L++ DA+ R+YA + + N DG G+T P+ Q ++ + ++ +D
Sbjct: 241 AGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSN-GLTAPNLEAQADVIREALADAGID 299
Query: 317 PKNLAWIEAHGTGTKVGDPEEVQALENVFCPGR-TTPLLIGSVKSNIGHSEPASGVCSVT 375
P + ++EAHGTGT +GDP E AL V+ G P IGSVKSNIGH E A+G+ +
Sbjct: 300 PATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLI 359
Query: 376 KVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLESRPL 414
K LA+++G IPP ++F +P N +I +S P
Sbjct: 360 KTALALKHGYIPPTLHFDTP--------NPEIDFDSSPF 390
|
Length = 1061 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 4e-71
Identities = 93/246 (37%), Positives = 134/246 (54%), Gaps = 10/246 (4%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+ + ITG+ FP +F E L D I + G P + G++Y
Sbjct: 2 EPVAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPADLS-GLYPP--SRVAGEIY-GFD 57
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSK-TGVFIGACFSESEK 151
FDAAFFG+ ++A MDP R+ LE +EA+ DAG++P SLRGS TGVF+G+ + +
Sbjct: 58 FDAAFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASLRGSDRTGVFVGSGSGDYAE 117
Query: 152 TWFYEK----LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKS 207
+ +++ + ++ A R+SY LG+ GPS TVD+ACSSSL AL A +S
Sbjct: 118 LQALDSAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSSLVALHAAVRS 177
Query: 208 IRDGHCNAAFVGGCNLCLHPYVSLQFARLG-VLSPDGRCKSFDEAANGYCRSEAVCIMYL 266
IR G C+ A GG L P F+ G +LSPDG CK+FD A+G+ R E V + L
Sbjct: 178 IRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDGPCKAFDPFADGFVRGEGVGAVLL 237
Query: 267 QKSKDA 272
++ +A
Sbjct: 238 KELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|144338 pfam00698, Acyl_transf_1, Acyl transferase domain | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 6e-61
Identities = 101/342 (29%), Positives = 157/342 (45%), Gaps = 33/342 (9%)
Query: 463 WFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPK-GVDVKRIITDTNPKMFDNIL 520
FVFSG GSQW GMG +L++ P+FAA I + KP+ G V ++ + + + +
Sbjct: 1 VFVFSGQGSQWAGMGMDLLKTSPVFAAAIARCDEAFKPQYGFSVLDVLRNNPEGLLERVD 60
Query: 521 NSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLAS 580
+ A+QI L +LR+ +TP ++GHS+GE+ A G ++E+ L R
Sbjct: 61 VVQPALFAMQIALAALLRSYGVTPAAVVGHSLGEIAAAVVAGALSLEEAALVVALRSRLM 120
Query: 581 VETEFIRGAMAAVGLGYKDLRS--RCPPEIEVACHNSPDSSTISGPEENVKKFVAELQAD 638
+ G MAAVGL +++ R P + VA NSP S ++GP+E + +FV ++A
Sbjct: 121 RQLA-GPGGMAAVGLPAEEVEQLARWPDRVVVAIVNSPRSVVVAGPQEALDEFVERVEAR 179
Query: 639 NIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLS 698
+ AR I V + H+P Q A DI PR + +
Sbjct: 180 GVRARVIAV-DYASHSP--QVEAIGDALALALADIAP-------------RTPRVPFYST 223
Query: 699 TSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHI--QKNAITLEIAPHGLLQAILR 756
TS + + L AEY NL +PV F E Q + +E++PH +L A +
Sbjct: 224 TS-GDPSDQREL----DAEYWYRNLRNPVRFAEAVLAAAEQGYLVFVEVSPHPVLLAAVE 278
Query: 757 RSL----PKTVTNVSLTQRENANSVLYLLQALGKLYESGVHP 794
+L K T V R + ++ L AL + +GV
Sbjct: 279 ETLKSADGKDATLVGTLIR-DQGDLVTFLYALAVAHLTGVAV 319
|
Length = 319 |
| >gnl|CDD|214838 smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 2e-56
Identities = 91/316 (28%), Positives = 139/316 (43%), Gaps = 48/316 (15%)
Query: 465 VFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKG----VDVKRIITDTNPKMFDNI 519
VF+G GSQW GMG EL E P+F +++ A L+P +DV +
Sbjct: 1 VFTGQGSQWAGMGRELYETEPVFREALDECDAALQPLLGWSLLDVLLGEDGAASL--LDT 58
Query: 520 LNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLA 579
+ + A+Q+ L +LR+ + PD ++GHS GE+ AY G ++E RG
Sbjct: 59 EVAQPALFAVQVALARLLRSWGVRPDAVVGHSSGEIAAAYVAGVLSLEDAARLVAARGRL 118
Query: 580 SVETEFIRGAMAAVGLGYKDLRSRC---PPEIEVACHNSPDSSTISGPEENVKKFVAELQ 636
GAM AVGL +++ P + VA NSP S +SG E+ V + A L+
Sbjct: 119 MQALP-GGGAMLAVGLSEEEVEPLLAGVPDRVSVAAVNSPSSVVLSGDEDAVDELAARLE 177
Query: 637 ADNIFARTINVANTEKHA-------PLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQP 689
A+ IFAR + V HA P+ D+ RA + A + +P
Sbjct: 178 AEGIFARRLKV----DHAFHSPHMEPIL-------------DEFRAAL-----AGLTPRP 215
Query: 690 KPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA---ITLEIA 746
PR ++ST A+ A+Y NL PV F + R + + LE+
Sbjct: 216 -PR-IPFVST--VTGTLIDG-AELDDADYWVRNLREPVRFADAVRALLAEGGVTVFLEVG 270
Query: 747 PHGLLQAILRRSLPKT 762
PH +L ++++L
Sbjct: 271 PHPVLTGPIKQTLAAA 286
|
Length = 298 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 174 bits (444), Expect = 1e-47
Identities = 99/365 (27%), Positives = 162/365 (44%), Gaps = 48/365 (13%)
Query: 92 KFDAAFFGVHF---------------KQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGS 136
+FDA+ F K+ MD + L EA+ DAG++P+ L
Sbjct: 37 RFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAAEEALADAGLDPEELDPE 96
Query: 137 KTGVFIG---ACFSESEKTW--FYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYT 189
+ GV IG + E+ + EK +++ F + M A +V+ LG+ GP+YT
Sbjct: 97 RIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYT 156
Query: 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGR 244
V +AC+S +A+ A + IR G + GG + P FA L LS P+
Sbjct: 157 VSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKA 216
Query: 245 CKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS-- 298
+ FD+ +G+ E ++ L+ + AK ++YA ++ + D Y IT P
Sbjct: 217 SRPFDKDRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYH---ITAPDPD 273
Query: 299 --GALQ--QRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLL 354
GA + + L D + P+++ +I AHGT T + D E +A++ VF +
Sbjct: 274 GEGAARAMRAALAD----AGLSPEDIDYINAHGTSTPLNDAAESKAIKRVF-GEHAKKVP 328
Query: 355 IGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLESRPL 414
+ S KS GH A+G +LA+ +G++PP IN + P P + E+R
Sbjct: 329 VSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEP---DPECDLDYVPNEAREA 385
Query: 415 DAEYV 419
Y
Sbjct: 386 PIRYA 390
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 4e-45
Identities = 53/119 (44%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 276 YARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDP 335
YA + + N DG G+T P+G Q R + ++ +DP+++ ++EAHGTGT +GDP
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60
Query: 336 EEVQALENVFCPG-RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFK 393
E +AL+ VF PG + PL +GSVKSNIGH E A+GV + K +LA+ +G+IPP +N
Sbjct: 61 IEAEALKAVFGPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 2e-42
Identities = 83/320 (25%), Positives = 137/320 (42%), Gaps = 33/320 (10%)
Query: 108 MDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFS--ESEKTWFYEKLQING--- 162
MD ++ + EA+ DAG++ + + GV IG+ E + L
Sbjct: 68 MDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKR 127
Query: 163 ----FGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFV 218
+ A V+ G+ GP+YT +AC++ +A+ A + IR G +
Sbjct: 128 ISPFLVPKMLPN-LAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIA 186
Query: 219 GGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAK 273
GG + P F + LS P+ + FD+ +G+ E + L++ + A
Sbjct: 187 GGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGALVLEELEHAL 246
Query: 274 ----RVYARVVHAKTNCDGYKEQGITYPS----GALQ--QRLLEDFYSECEVDPKNLAWI 323
++YA +V T D Y IT P+ GA++ + L D + P+++ +I
Sbjct: 247 ARGAKIYAEIVGYGTTSDAYH---ITAPAPDGEGAIRAMRAALAD----AGLTPEDIDYI 299
Query: 324 EAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383
AHGT T D E A++ VF L + S KS GH+ A+G +LA+ +
Sbjct: 300 NAHGTSTPANDKAESLAIKRVF-GEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRD 358
Query: 384 GIIPPNINFKSPRKDIPSFH 403
GIIPP IN +P +
Sbjct: 359 GIIPPTINLDNPDPEAADLD 378
|
Length = 412 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 3e-36
Identities = 66/282 (23%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 116 LEKTYEAVIDAGINPKSLRGSKTGVFIGAC--FSESEKTWFYEKLQINGFGITGCSRAML 173
E A+ DAG++ + + GV +G + + + +T
Sbjct: 16 FEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGA 75
Query: 174 ANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQF 233
+ +++ LG++GP+Y V +AC+ SL+AL A ++++G + GG P
Sbjct: 76 SGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFD 135
Query: 234 ARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKR----VYARVVHAKTNCDGY 289
A + +P+ ++FD AA+G+ + + +++ + A +YA +V DG
Sbjct: 136 AMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGA 195
Query: 290 KEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGR 349
G PS R ++ + + ++ ++ AHGTGT +GD +E++ L + F
Sbjct: 196 GM-GAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGD-- 252
Query: 350 TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNIN 391
+ + K+ G+ A+ V +V + +L +E+G IPP+I+
Sbjct: 253 -KSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIH 293
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 2e-34
Identities = 98/406 (24%), Positives = 158/406 (38%), Gaps = 54/406 (13%)
Query: 37 ITGIAGVFPDST---DVRDFGEKLNN------KVDLISDDDRRWKLGKEHPEIPQRTGKL 87
ITGI V P +V +F E L V + R G
Sbjct: 5 ITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLKSRFDRGVAG------------- 51
Query: 88 YEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGIN-PKSLRGSKTGVFIGACF 146
++ D G K+ +D + L T EA+ DAGI P + S+ GV +G+
Sbjct: 52 -QIPTGD--IPGWDAKRTGIVDRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGM 108
Query: 147 SESEKTWFYEKLQINGFGITGCSRAMLANRV------SYWLGVNGPSYTVDSACSSSLYA 200
KL + ML+ L +GP T AC+++L A
Sbjct: 109 GGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEA 168
Query: 201 LEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGY 255
L+ A ++IR G + VGG FA +G LS P+ + FDE +G+
Sbjct: 169 LDLAVEAIRSGKADIVVVGGVED-PLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGF 227
Query: 256 CRSEAVCIMYLQKSKDA----KRVYARVVHAKTNCDGYKEQGITYPSGAL---QQRLLED 308
+E ++ L++++ A +Y RV + DG + + + + L
Sbjct: 228 VEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAG-RSVPAGGKGIARAIRTAL-- 284
Query: 309 FYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPA 368
++ + +L I AHGT T D E +A+ V PL + + K+ GHS+ A
Sbjct: 285 --AKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVA-GALGAPLPVTAQKALFGHSKGA 341
Query: 369 SGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLESRPL 414
+G + + ++E+G+IPP N D+ + SR L
Sbjct: 342 AGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLS---VVGLSRDL 384
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 3e-33
Identities = 102/435 (23%), Positives = 172/435 (39%), Gaps = 50/435 (11%)
Query: 463 WFVFSGMGSQWDGMGTELMEI-PIFAATIEKLQAVLKPK-GVDVKRIITDTNPKMFDNIL 520
FVF G GSQW GMG EL + P+FA+ + L+A+L G + +I + ++I
Sbjct: 528 VFVFPGQGSQWAGMGRELYALEPVFASAFDALEALLHRLLGFSLPEVIFAPDYPFLESID 587
Query: 521 NSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQ--TILAAYYRGL 578
+ + A+ + L + R+ + P +IGHS+GEL A A G ++E ++A R +
Sbjct: 588 FAQPALFAVSVALAALWRSWGVIPGAVIGHSLGELAAAVAAGVLSLEDALRVVATRGRLM 647
Query: 579 ASVETEFIRGAMAAVGLGYKD----LRSRCPPEIEVACHNSPDSSTISGPEENVKKFVAE 634
+ E GAM AV L L + P++ +A NSP I+G E + +A
Sbjct: 648 QQLAGE---GAMLAVELSLLAEVQELLALGRPQVPLAAVNSPQQVVIAGDPEAIAALIAR 704
Query: 635 LQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRST 694
LQA + AR + V+ HA P + PR
Sbjct: 705 LQAQGVRARRLAVS----HAF--HSPLMDPILDEFAAALA-------------DLAPRPP 745
Query: 695 KWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQ 752
+ SN + A+Y +L PV F + + +E+ P +L
Sbjct: 746 QIPLISNVTGDLAG--EPGGDAQYWVQHLRQPVRFADAIAAALADGARTFIEVGPGPVLT 803
Query: 753 AILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLYPKIDFPVSRGTP 812
++++L + T R +A +L L AL +L+ +GV + L D G
Sbjct: 804 ESIKQTLRDAI-LSIATLRRDAPELLSFLAALAQLFVAGVAVDWSPLVYGPD-----GRL 857
Query: 813 MISPLVRWEHSEDW----------YVTTYRMQEKLKSGERTVVVSLKDDEMEFVSGHMID 862
+ P ++ W + + + SGE + SL + +++ H +
Sbjct: 858 VELPTYPFQRQRFWLDPEALGVASHPLLGAVLGRPSSGEVVLQGSLDLLAVPWLADHDVR 917
Query: 863 GRNLFPATGYLATVC 877
P Y+
Sbjct: 918 NVAALPGAAYVELAL 932
|
Length = 1061 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 7e-32
Identities = 80/362 (22%), Positives = 144/362 (39%), Gaps = 36/362 (9%)
Query: 62 DLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYE 121
L + L +P + EV++ + F F + E
Sbjct: 32 FLPDCIPEQKALENLVAAMPCQIAA--EVDQSE--FDPSDFAPTKRESRATHFAMAAARE 87
Query: 122 AVIDAGINPKS-LRGSKTGVFIG-----ACFSESEKTWFYEK--LQINGFGITGCSRAML 173
A+ DA ++ S + GV IG E YEK +++ + I M
Sbjct: 88 ALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMA 147
Query: 174 ANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQF 233
A V+ + GPS + +AC++ + + A++ I+ G + GG + P F
Sbjct: 148 AGLVAIKHKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGF 207
Query: 234 ARLGVLS------PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKR----VYARVVHAK 283
+R+ L P + FD+ G+ E I+ L++ + A R +YA +
Sbjct: 208 SRMRALCTKYNDDPQRASRPFDKDRAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYG 267
Query: 284 TNCDGYKEQGITYPS-------GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPE 336
++ D + IT P ++ L + ++ ++ ++ AH T T +GD
Sbjct: 268 SSSDAHH---ITAPHPDGRGARRCMENALKDG----ANININDVDYVNAHATSTPIGDKI 320
Query: 337 EVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPR 396
E++A++ VF L + S K +GH A+G IL++ IIPP IN ++P
Sbjct: 321 ELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPD 380
Query: 397 KD 398
+
Sbjct: 381 AE 382
|
Length = 421 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 122 bits (310), Expect = 7e-30
Identities = 92/338 (27%), Positives = 155/338 (45%), Gaps = 39/338 (11%)
Query: 92 KFDAAFFGVHF---------------KQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGS 136
+FDA+ V K+A MD + L EAV D+G++ +
Sbjct: 37 RFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAKEAVEDSGLDIEEEDAE 96
Query: 137 KTGVFIGA-----CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYT 189
+ GV IG+ E + EK +++ F I M A ++S G GP++
Sbjct: 97 RVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHA 156
Query: 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGR 244
V +AC++ +A+ A++ I+ G + GG + P FA + LS P+
Sbjct: 157 VVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKA 216
Query: 245 CKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS-- 298
+ FD+ +G+ E ++ L++ + AK ++YA +V + D Y IT P+
Sbjct: 217 SRPFDKDRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYH---ITAPAPE 273
Query: 299 GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTP-LLIGS 357
G R + + ++P+++ +I AHGT T +GD E +A++ VF G L + S
Sbjct: 274 GEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVF--GDHAYKLAVSS 331
Query: 358 VKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
KS GH A+G +LA+ +GI+PP IN +P
Sbjct: 332 TKSMTGHLLGAAGAIEAIFTVLALRDGIVPPTINLDNP 369
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-28
Identities = 104/426 (24%), Positives = 174/426 (40%), Gaps = 57/426 (13%)
Query: 35 ICITGIAGVFPDSTDVRDFGEKLNNKVDLISD-DDRRWKLGKEHPEIPQRTGKLY----- 88
I I G+A +F +S + F + + K+D I+D W + K Y
Sbjct: 9 IAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGG 68
Query: 89 ---EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGAC 145
EV+ F+ FG+ D + L E + DAG+ P K G+ +G
Sbjct: 69 FLPEVD-FNPMEFGLPPNILELTDISQLLSLVVAKEVLNDAGL-PDGYDRDKIGITLGVG 126
Query: 146 FSESEKTWFYEKLQ-------INGFGITGCSRAML------------------------A 174
+ + + +LQ G+ ML +
Sbjct: 127 GGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVIS 186
Query: 175 NRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFA 234
R++ + G + VD+AC+ SL A+ A + +G GG P++ + F+
Sbjct: 187 GRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFS 246
Query: 235 RLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKR----VYARVVHAKTNCDGYK 290
+ + + + FD + G E + +M L++ +DA+R +YA + + DG K
Sbjct: 247 KTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDG-K 305
Query: 291 EQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG-- 348
+ I P Q + L+ Y + P IEAHGTGT GD E L +VF
Sbjct: 306 FKSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDND 365
Query: 349 RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQ 408
+ + +GSVKS IGH++ +G + K +LA+ + ++PP IN P N K+
Sbjct: 366 QKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQP--------NPKLD 417
Query: 409 LESRPL 414
+E+ P
Sbjct: 418 IENSPF 423
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 2e-26
Identities = 104/427 (24%), Positives = 170/427 (39%), Gaps = 73/427 (17%)
Query: 35 ICITGIAGVFPDSTDVRDFGEKL---NNKVDLISDD---DRRWKLGKEHPEIPQRTGKLY 88
I +TG+ V P V F ++L + + ++D D K+G + P++ + +
Sbjct: 6 IVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGF 65
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGS-KTGVFIGACFS 147
+ +++ K MD + EA+ AG +P +L +T IG+
Sbjct: 66 DPDRYLDP------KDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGS--- 116
Query: 148 ESEKTWFYEKLQINGFGI------TGCSRA---------------MLANRVSYWLGVNGP 186
+ GF T SR M A VS G GP
Sbjct: 117 -----------GVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGP 165
Query: 187 SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQ-FARLGVLS----- 240
+AC++ + A+ A + IR G + A GG + VSL FA LS
Sbjct: 166 LGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDR-VSLAGFAAARALSTRFND 224
Query: 241 -PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA----KRVYARVVHAKTNCDGYKEQGIT 295
P+ + FD +G+ E I+ ++ + A A +V T+ D Y +T
Sbjct: 225 APEQASRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYH---MT 281
Query: 296 YP----SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTT 351
GA +R + + + P+ + + AH T T VGD EV A++ VF G +
Sbjct: 282 AGPEDGEGA--RRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVF--GHVS 337
Query: 352 PLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLES 411
L + S KS GH A+G ILA+ + I PP +N ++P + ++
Sbjct: 338 GLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLD--VVANKA 395
Query: 412 RPLDAEY 418
RP+D +Y
Sbjct: 396 RPMDMDY 402
|
Length = 424 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 8e-26
Identities = 88/339 (25%), Positives = 143/339 (42%), Gaps = 41/339 (12%)
Query: 92 KFDAAFFGVHF---------------KQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGS 136
FD + V K+A MD + + +AV DAG+
Sbjct: 38 HFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEENAD 97
Query: 137 KTGVFIGAC---FSESEKTWFYEKLQING------FGITGCSRAMLANRVSYWLGVNGPS 187
+ GV IG+ E+ + L G F + M A VS G GP+
Sbjct: 98 RIGVIIGSGIGGLETIEEQ--HITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPN 155
Query: 188 YTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PD 242
+++ +AC++ +A+ A + I G + GG + P FA LS P+
Sbjct: 156 HSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPE 215
Query: 243 GRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS 298
+ FD+ +G+ E I+ L++ + AK ++YA VV D Y +T P+
Sbjct: 216 RASRPFDKDRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYH---MTAPA 272
Query: 299 --GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG 356
G R ++ + ++P+++ +I AHGT T GD E QA++ VF + +
Sbjct: 273 PDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYK-VAVS 331
Query: 357 SVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
S KS GH A+G +LA+ + +IPP IN +P
Sbjct: 332 STKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNP 370
|
Length = 411 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-22
Identities = 89/343 (25%), Positives = 135/343 (39%), Gaps = 45/343 (13%)
Query: 103 KQAHTMDPMCRIILEKTYEAVIDAG-INPKSLRGSKTGVFIGACFSESEKTWFYEKLQIN 161
K+ +M + + + A+ DAG + L + G+ A S + T I
Sbjct: 65 KKIRSMGRVSLMATRASELALEDAGLLGDPILTDGRMGI---AYGSSTGST-----DPIG 116
Query: 162 GFG---ITGCSRAMLAN------------RVSYWLGVNGPSYTVDSACSSSLYALEHAYK 206
FG + G + A V + G+ G SAC+S + +AY+
Sbjct: 117 AFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYE 176
Query: 207 SIRDGHCNAAFVGGCN-LCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRSEA 260
+I+ G+ GG LC P + F L S P+ + FD +G E
Sbjct: 177 AIKYGYQTVMLAGGAEELC--PTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGEG 234
Query: 261 VCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVD 316
+ L++ + AK +YA +V TN DG +T P Q +E + +
Sbjct: 235 AGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH---VTQPQAETMQIAMELALKDAGLA 291
Query: 317 PKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTK 376
P+++ ++ AHGT T GD E QA VF G P I S+KS GH+ A G
Sbjct: 292 PEDIGYVNAHGTATDRGDIAESQATAAVF--GARMP--ISSLKSYFGHTLGACGALEAWM 347
Query: 377 VILAMENGIIPPNINFKSPRKDIPSFHNGKIQLESRPLDAEYV 419
I M G P +N + I E+R +D EYV
Sbjct: 348 SIEMMNEGWFAPTLNLTQVDPACGALD--YIMGEAREIDTEYV 388
|
Length = 405 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-22
Identities = 96/350 (27%), Positives = 148/350 (42%), Gaps = 63/350 (18%)
Query: 93 FDAAFFGVH-------FKQAHTMDP-----MCRII---LEKTYEAVIDAGINPKSLRGSK 137
FDA+ F V F MDP R I L+ EA+ DAG P+ L +
Sbjct: 39 FDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAAREAMKDAGFLPEELDAER 98
Query: 138 TGVFIGA--------------CFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV 183
GV + CF + + +I+ F I ML +S G+
Sbjct: 99 FGVSSASGIGGLPNIEKNSIICFEKGPR-------KISPFFIPSALVNMLGGFISIEHGL 151
Query: 184 NGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS--- 240
GP+ + +AC++ +A+ A K+I G + V G + P FA + LS
Sbjct: 152 KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRN 211
Query: 241 --PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQG- 293
P + FD+ +G+ E + L++ + AK ++YA ++ G+ E G
Sbjct: 212 DDPKKASRPFDKDRDGFVMGEGAGALVLEEYESAKKRGAKIYAEII-------GFGESGD 264
Query: 294 ---ITYPS--GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG 348
IT P+ G L R ++ +PK + +I AHGT T D E AL+ +F
Sbjct: 265 ANHITSPAPEGPL--RAMKAALEMAG-NPK-IDYINAHGTSTPYNDKNETAALKELFGSK 320
Query: 349 RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKD 398
P + S K IGH A+G I+AM +GI+PP IN ++P +
Sbjct: 321 EKVPP-VSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPE 369
|
Length = 406 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 99.3 bits (247), Expect = 2e-21
Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 44/348 (12%)
Query: 89 EVNKFDAAFFGVHF---------------KQAHTMDPMCRIILEKTYEAVIDAGINP--- 130
E+ +FD + F K + MD +L +A+ D GI
Sbjct: 162 EIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVM 221
Query: 131 KSLRGSKTGVFIGAC------FSESEKTWFYEKLQINGFGI----TGCSRAMLANRVSYW 180
K L +K GV IG+ F+++ + ++N F + T AMLA
Sbjct: 222 KELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD---- 277
Query: 181 LGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS 240
LG GP+Y++ +AC++S + + +A I G + GG + + P F LS
Sbjct: 278 LGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALS 337
Query: 241 -----PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKR----VYARVVHAKTNCDGYKE 291
P + +D +G+ E ++ L++ + AK+ +YA + CD Y
Sbjct: 338 QRNDDPTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAY-H 396
Query: 292 QGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTT 351
+P GA +E ++ V +++ +I AH T TK GD +E QAL + C G+
Sbjct: 397 MTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQAL--MRCFGQNP 454
Query: 352 PLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDI 399
L + S KS IGH A+G + A+ G + PNIN ++P +
Sbjct: 455 ELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGV 502
|
Length = 540 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 3e-20
Identities = 81/342 (23%), Positives = 142/342 (41%), Gaps = 42/342 (12%)
Query: 90 VNKFDAAFFGVHF---------------KQAHTMDPMCRIILEKTYEAVIDAGINPKSLR 134
+ FD F F K A MD + + +A+ D+G+
Sbjct: 38 IEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAGIQALDDSGLEVTEEN 97
Query: 135 GSKTGVFIGACFS-----ESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPS 187
+ GV IG+ E+ EK +++ F + M+A +S G+ GP+
Sbjct: 98 AHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPN 157
Query: 188 YTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PD 242
+ +AC++ L+ + HA + I G +A GG P F LS P
Sbjct: 158 IAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQ 217
Query: 243 GRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS 298
+ +D+ +G+ + +M L++ + AK ++YA +V + D Y +T PS
Sbjct: 218 KASRPWDKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYH---MTSPS 274
Query: 299 -----GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPL 353
GAL +E + V + + ++ AHGT T GD E++ ++ + +
Sbjct: 275 EDGSGGALA---MEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQV 331
Query: 354 LIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
L+ S KS GH A+G ++++ + I+PP IN P
Sbjct: 332 LVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDP 373
|
Length = 414 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 3e-19
Identities = 57/241 (23%), Positives = 94/241 (39%), Gaps = 37/241 (15%)
Query: 153 WFYEKLQING--FGITGCSRAM--LANRVSYWLGVN-GPSYTVDSACSSSLYALEHAYKS 207
K I G G TG S A +++Y LG++ GP+Y+V+ AC++ L AL A +
Sbjct: 22 AGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQ 81
Query: 208 IRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQ 267
+++G + GG + F D AA SE
Sbjct: 82 VQNGKADIVLAGGSEEFV-------FG--------------DGAAAAVVESEE------H 114
Query: 268 KSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHG 327
+ A +V DG + SG R + P ++ ++EAHG
Sbjct: 115 ALRRGAHPQAEIVSTAATFDGASM--VPAVSGEGLARAARKALEGAGLTPSDIDYVEAHG 172
Query: 328 TGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIP 387
TGT +GD E+ + + + GH A+G+ + +++L +E+ IP
Sbjct: 173 TGTPIGDAVELALGLDPDGVR---SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIP 229
Query: 388 P 388
P
Sbjct: 230 P 230
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|223408 COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 7e-19
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 13/184 (7%)
Query: 464 FVFSGMGSQWDGMGTELMEI-PIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNS 522
FVF G GSQ GMG +L E P T ++ L G D+ ++ + + + N+
Sbjct: 6 FVFPGQGSQSLGMGKDLYENSPEAKETFDEADEAL---GFDLWALVFEGPEEELNLTQNT 62
Query: 523 FVGIAAIQIGLVDILRA--LNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLAS 580
+ + + +L L + PD + GHS+GE A G + E + RG
Sbjct: 63 QPALLLVSLAAYRVLAEQGLGVKPDFVAGHSLGEYSALAAAGVLSFEDALKLVRKRGKLM 122
Query: 581 VE-TEFIRGAMAAV-GLGYKDLRSRC-----PPEIEVACHNSPDSSTISGPEENVKKFVA 633
E G MAAV GL + + C +E+A +NSP ISG +E ++K
Sbjct: 123 QEAVPRGEGGMAAVLGLDDEQVEKACEEAAQGTVVEIANYNSPGQIVISGTKEALEKAAE 182
Query: 634 ELQA 637
L+
Sbjct: 183 ILKE 186
|
Length = 310 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 2e-18
Identities = 78/297 (26%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 121 EAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGIT------------GC 168
+A+ DAG++ + + +TG+ G+ S + Q+
Sbjct: 81 QAIADAGLSEEQVSNPRTGLIAGSG-GGSTRN------QVEAADAMRGPRGPKRVGPYAV 133
Query: 169 SRAMLANRVS----YWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLC 224
++AM A+ VS + G +Y++ SAC++S + + +A + I+ G + F GG
Sbjct: 134 TKAM-ASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE- 191
Query: 225 LHPYVSLQFARLGVLS------PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----R 274
L +S F +G LS P+ +++D +G+ + ++ +++ + A +
Sbjct: 192 LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGVVVVEELEHALARGAK 251
Query: 275 VYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGD 334
+YA +V DGY + PSG R ++ + VD + +I HGT T VGD
Sbjct: 252 IYAEIVGYGATSDGYD---MVAPSGEGAVRCMQMALA--TVDTP-IDYINTHGTSTPVGD 305
Query: 335 PEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNIN 391
+E+ A+ VF G +P I + KS GHS A+GV +L ME+G I P+ N
Sbjct: 306 VKELGAIREVF--GDKSP-AISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSAN 359
|
Length = 406 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 3e-18
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 27/239 (11%)
Query: 184 NGPSYTVD-------------SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS 230
NGP+ V SAC+S A+ A++ I G + A GG +
Sbjct: 148 NGPAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPI 207
Query: 231 LQFARLG-VLS-----PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVV 280
FA++ V+S P G C+ FD+ +G+ E +M ++ + AK + AR++
Sbjct: 208 AGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIM 267
Query: 281 HAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQA 340
A DG+ P+G + + P ++ + AH TGT VGD E +A
Sbjct: 268 GASITSDGFHMVA-PDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKA 326
Query: 341 LENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDI 399
+ N R + + KS +GHS A G +LA+ +G+IPP +N ++ +I
Sbjct: 327 INNALGGHRPA---VYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEI 382
|
Length = 418 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 1e-16
Identities = 84/328 (25%), Positives = 138/328 (42%), Gaps = 55/328 (16%)
Query: 121 EAVIDAGINP-KSLRGSKTGVFIG---ACFSE--------SEKT------WFYEKLQING 162
EA+ DA P + +TGV IG ++ EK +F ++ IN
Sbjct: 103 EALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILIN- 161
Query: 163 FGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCN 222
M A VS G GP++ +AC++ +++ A++ I+ G + GG
Sbjct: 162 ---------MAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTE 212
Query: 223 LCLHPYVSLQFARLGVLS------PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKR-- 274
+ F+R LS P + FD +G+ E ++ L++ + AKR
Sbjct: 213 SSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRG 272
Query: 275 --VYARVVHAKTNCDGYKEQGITYPS----GAL--QQRLLEDFYSECEVDPKNLAWIEAH 326
+YA V + D + IT P GA+ R L+ + + P + ++ AH
Sbjct: 273 AKIYAEVRGYGMSGDAHH---ITQPHEDGRGAVLAMTRALQ----QSGLHPNQVDYVNAH 325
Query: 327 GTGTKVGDPEEVQALENVFCPGRTT-PLLIGSVKSNIGHSEPASGVCSVTKVILAMENGI 385
T T +GD E +A++ VF T+ L S K GH A+G +LA+ +GI
Sbjct: 326 ATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGI 385
Query: 386 IPPNINFKSPRKDIPSFHNGKIQLESRP 413
PP +N + P P F +G + L +
Sbjct: 386 APPTLNLERPD---PIFDDGFVPLTASK 410
|
Length = 437 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 5e-16
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 181 LGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS 240
+G GP +AC++ L+A+ + I+ G C G + P F ++G L+
Sbjct: 133 IGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALA 192
Query: 241 PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITY 296
G FD G E I+ L+ ++ A+ ++Y +++ CD Y ++
Sbjct: 193 KTG-AYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYH---MSA 248
Query: 297 PSG-------ALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGR 349
P A+QQ L + + P+++ +I AHGT T++ D E ++ +F
Sbjct: 249 PEPDGKSAIAAIQQCL-----ARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPHR- 302
Query: 350 TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
+ + S K GH+ ASG V +LA+ + +PP + + P
Sbjct: 303 ---VAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEP 345
|
Length = 381 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 6e-16
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 28/238 (11%)
Query: 173 LANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCN-LCLHPYVSL 231
LA+ + +LG++GP+YT+ +ACSSS A + + G C+AA VGG + LC L
Sbjct: 139 LADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLT---L 195
Query: 232 Q-FARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKRVYARVVHAKTNCDGYK 290
F L LSP C+ F +G EA L++ DA ++ + D +
Sbjct: 196 NGFNSLESLSP-QPCRPFSANRDGINIGEAAAFFLLEREDDAA---VALLGVGESSDAHH 251
Query: 291 EQGIT--YPSG-----ALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALEN 343
++ +P G A+QQ L ++ + P ++ +I HGT T + D E +A+
Sbjct: 252 ---MSAPHPEGLGAILAMQQAL-----ADAGLAPADIGYINLHGTATPLNDAMESRAVAA 303
Query: 344 VFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPS 401
VF G P S K GH+ A+G LA+ +G+ P N P +P
Sbjct: 304 VF--GDGVPC--SSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPP 357
|
Length = 392 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 1e-15
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 181 LGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS 240
G+ G +TV A +S A+ A + ++ G +A G + L + LG +
Sbjct: 154 FGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMG 213
Query: 241 -------PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKR----VYARVVHAKTNCDGY 289
P+ C+ FD+ +G+ EA + L+ ++ A+R YA+++ D
Sbjct: 214 SDRFADEPEAACRPFDQDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDAN 273
Query: 290 KEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGR 349
+ PS + R++ + P+++ ++ HGTG+ +GD E+ AL F G
Sbjct: 274 RG---PDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLGDETELAAL---FASGL 327
Query: 350 TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
I + KS GH A+G+ + +L M G + P+ N P
Sbjct: 328 AHAW-INATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEP 372
|
Length = 410 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 75.5 bits (185), Expect = 2e-14
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 172 MLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL 231
+ A VS GP +AC++ + A+ A + IR+ + A GG +
Sbjct: 69 LAAGHVSIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLA 128
Query: 232 QFARLGVLS------PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA----KRVYARVVH 281
FA LS P+ + FD A +G+ E ++ +++ + A + A +V
Sbjct: 129 GFAAARALSTHFNSTPEKASRPFDTARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVG 188
Query: 282 AKTNCDGYK-EQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQA 340
T+ D Y G GA R ++ + + P+ + + AH T T VGD E+ A
Sbjct: 189 YGTSADAYHMTSGAEDGDGAY--RAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINA 246
Query: 341 LENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
++++F G + L I S KS GH A+G +LA+ + I+P +N ++P
Sbjct: 247 IKHLF--GESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENP 299
|
Length = 342 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 4e-13
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 13/237 (5%)
Query: 174 ANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQF 233
A+R++ G G ++ +AC+S A++ ++IR G + A + + ++F
Sbjct: 155 ADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRF 214
Query: 234 ARLGVLS-----PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKRVYARVVHAKTNCDG 288
+ L LS P+ K F + +G+ +E + L+ + A A+++ C G
Sbjct: 215 SLLSALSTQNDPPEKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGC-G 273
Query: 289 YKEQGI----TYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV 344
K + P G+ + ++ + P+ + +I AHGT T D E L V
Sbjct: 274 EKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAV 333
Query: 345 FCPG-RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400
F G R + + S KS IGH+ A+G +L ++ G +PP IN+ +P IP
Sbjct: 334 F--GERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIP 388
|
Length = 425 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 6e-10
Identities = 77/325 (23%), Positives = 113/325 (34%), Gaps = 59/325 (18%)
Query: 109 DPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFI-----GACFSESEK------------ 151
D M R+ L A+ DAG++P +L GV G F + E
Sbjct: 69 DRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVS 128
Query: 152 -----TWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYK 206
WFY A+ ++S G+ GPS V + + L AL A +
Sbjct: 129 AYQSFAWFY---------------AVNTGQISIRHGMRGPSGVVVAEQAGGLDALAQARR 173
Query: 207 SIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCRSEAVC 262
+R G GG + L P+ + G LS P FD AA GY E
Sbjct: 174 LVRRGTP-LVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGA 232
Query: 263 IMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPK 318
I+ L+ + A+ RVY + D G R + ++ + P+
Sbjct: 233 ILVLEDAAAARERGARVYGEIAGYAATFDPPPGSG----RPPGLARAIRLALADAGLTPE 288
Query: 319 NLAWIEAHGTGTKVGDPEEVQALENVFCPGR---TTPLLIGSVKSNIGHSEPASGVCSVT 375
++ + A G D E AL VF P T P K+ G V
Sbjct: 289 DVDVVFADAAGVPELDRAEAAALAAVFGPRGVPVTAP------KTMTGRLYAGGAPLDVA 342
Query: 376 KVILAMENGIIPPNINFKSPRKDIP 400
+LA+ +G+IPP +N
Sbjct: 343 TALLALRDGVIPPTVNVTDVPPAYG 367
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|232839 TIGR00128, fabD, malonyl CoA-acyl carrier protein transacylase | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 7e-10
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNS 522
+VF G GSQ GMG +L E PI ++ L G D+K++ + + + +
Sbjct: 5 YVFPGQGSQTVGMGKDLYEQYPIAKELFDQASEAL---GYDLKKLCQEGPAEELNKTQYT 61
Query: 523 FVGIAAIQIGLVDILR-ALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRG---- 577
+ + L L+ + PD GHS+GE A G E + RG
Sbjct: 62 QPALYVVSAILYLKLKEQGGLKPDFAAGHSLGEYSALVAAGALDFETALKLVKKRGELMQ 121
Query: 578 LASVETEFIRGAMAAV-GLGYKDLRSRCP----PEIEVACHNSPDSSTISGPEENVKK 630
A E GAMAAV GL + L C ++++A NSP ISG ++ V+
Sbjct: 122 EAVPEGG---GAMAAVIGLDEEQLAQACEEATENDVDLANFNSPGQVVISGTKDGVEA 176
|
This enzyme of fatty acid biosynthesis transfers the malonyl moeity from coenzyme A to acyl-carrier protein. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 290 |
| >gnl|CDD|132175 TIGR03131, malonate_mdcH, malonate decarboxylase, epsilon subunit | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 4e-08
Identities = 43/179 (24%), Positives = 70/179 (39%), Gaps = 14/179 (7%)
Query: 464 FVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDN-ILNS 522
+F G GSQ GM EL + P AA + + VL G+D + + D +
Sbjct: 3 LLFPGQGSQRAGMLAELPDHPAVAAVLAEASDVL---GIDPREL--DDAEALASTRSAQL 57
Query: 523 FVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGL---A 579
+ A + L AL P + G+SVGE A G T + + R
Sbjct: 58 CILAA--GVAAWRALLALLPRPSAVAGYSVGEYAAAVVAGVLTFDDALRLVALRAALMDQ 115
Query: 580 SVETEFIRGAMAAVGLGYKDLRSRCPP-EIEVACHNSPDSSTISGPEENVKKFVAELQA 637
+V + G +A +GL + + + +A N+PD I+G ++ +A
Sbjct: 116 AVPGGY--GMLAVLGLDLAAVEALIAKHGVYLAIINAPDQVVIAGSRAALRAVAELARA 172
|
Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group. Length = 295 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 2e-07
Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 24/221 (10%)
Query: 465 VFSGMGSQWDGMGTELM-EIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFD------ 517
+F+G GSQ+ MG EL P + +V G + P +F+
Sbjct: 584 LFAGQGSQYLNMGRELACNFPEVRQAAADMDSVFTQAGKGALSPVLYPIP-VFNDESRKA 642
Query: 518 ------NILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTIL 571
N ++ I + +G + D GHS GEL A G + + ++
Sbjct: 643 QEEALTNTQHAQSAIGTLSMGQYKLFTQAGFKADMTAGHSFGELSALCAAGVISDDDYMM 702
Query: 572 AAYYRG--LASVETEFIRGAMAAVGLGYK---DLRSRCPPEIE---VACHNSPDSSTISG 623
A+ RG +A+ E G M AV L + + C + E +A +NSP I+G
Sbjct: 703 LAFSRGQAMAAPTGEADIGFMYAVILAVVGSPTVIANCIKDFEGVSIANYNSPTQLVIAG 762
Query: 624 PEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRP 664
++ L+ A + V+ H PL AQ+P
Sbjct: 763 VSTQIQIAAKALKEKGFKAIPLPVSGA-FHTPL-VAHAQKP 801
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 7e-04
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 24/108 (22%)
Query: 114 IILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAML 173
+ E A+ DAG+ P + V +G ++
Sbjct: 19 LAAEAARAALDDAGLEPADI----DAVVVGNAAGGR-------------------FQSFP 55
Query: 174 ANRVSYWLGVNG-PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGG 220
++ +LG+ G P+ V++A +S A+ A +I G + V G
Sbjct: 56 GALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVG 103
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.003
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 17/103 (16%)
Query: 120 YEAVIDAGI--NPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRV 177
A+IDAG+ P + + I C ++ + Q A+ A
Sbjct: 31 GAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQA----------ALAAG-- 78
Query: 178 SYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGG 220
L + P+ TV+ AC+S L A+ A ++I G + GG
Sbjct: 79 ---LPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGG 118
|
Length = 392 |
| >gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.004
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 174 ANRVSYWLGVNG-PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLC 224
A V LG+ G P++ + +ACS LYAL A IR G V G
Sbjct: 92 ACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETL 143
|
Length = 323 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.004
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 181 LGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGG 220
L + P+ TV+ C S L A+ A +SI G + GG
Sbjct: 71 LPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGG 110
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 883 | |||
| KOG1202|consensus | 2376 | 100.0 | ||
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| KOG1394|consensus | 440 | 100.0 | ||
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PF00698 | 318 | Acyl_transf_1: Acyl transferase domain; InterPro: | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| TIGR02816 | 538 | pfaB_fam PfaB family protein. The protein PfaB is | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| TIGR00128 | 290 | fabD malonyl CoA-acyl carrier protein transacylase | 100.0 | |
| TIGR03131 | 295 | malonate_mdcH malonate decarboxylase, epsilon subu | 100.0 | |
| PLN02752 | 343 | [acyl-carrier protein] S-malonyltransferase | 100.0 | |
| smart00827 | 298 | PKS_AT Acyl transferase domain in polyketide synth | 100.0 | |
| COG0331 | 310 | FabD (acyl-carrier-protein) S-malonyltransferase [ | 100.0 | |
| KOG2926|consensus | 386 | 100.0 | ||
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.93 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.92 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.84 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.84 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.83 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.83 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.83 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.81 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.81 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.79 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.79 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.79 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.79 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.78 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.78 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.77 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.77 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.77 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.76 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.76 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.76 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.75 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.75 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.75 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.75 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.73 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.73 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.73 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.73 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.72 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.72 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.71 | |
| PRK06158 | 384 | thiolase; Provisional | 99.71 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.71 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.71 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.71 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.7 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.69 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.69 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.69 | |
| KOG1390|consensus | 396 | 99.68 | ||
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.68 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.67 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.67 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.64 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.64 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.62 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.61 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.6 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.58 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.57 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.56 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.55 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.55 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.55 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.54 | |
| KOG1406|consensus | 408 | 99.48 | ||
| KOG1389|consensus | 435 | 99.45 | ||
| KOG1391|consensus | 396 | 99.45 | ||
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.44 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.43 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.41 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.35 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.32 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.32 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.29 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.22 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 99.19 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.19 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.1 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.1 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.08 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.07 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.04 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.04 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.01 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 98.97 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 98.89 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 98.86 | |
| KOG1392|consensus | 465 | 98.81 | ||
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 98.77 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 98.76 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 98.74 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 98.66 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 98.52 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 98.51 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 98.48 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 98.24 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 98.23 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 98.12 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 97.98 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 97.73 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 97.71 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 97.69 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 97.47 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 97.45 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 96.83 | |
| smart00826 | 167 | PKS_DH PKS_DH. | 96.58 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 94.75 | |
| cd07198 | 172 | Patatin Patatin-like phospholipase. Patatin is a s | 87.66 | |
| cd07205 | 175 | Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi | 82.43 | |
| cd07209 | 215 | Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim | 82.03 | |
| cd07207 | 194 | Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho | 81.79 | |
| cd07227 | 269 | Pat_Fungal_NTE1 Fungal patatin-like phospholipase | 80.21 |
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-147 Score=1241.32 Aligned_cols=828 Identities=50% Similarity=0.935 Sum_probs=786.8
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
.++|+|.||..++|..+++++||++|.+|.+.+++.+.||..+ ..+.|.+.|.+.|.+.||+.||+..++++..||||
T Consensus 10 ~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~rrW~~G--~ygLP~r~gKlKdL~kFDa~ff~vh~KQa~~MDPq 87 (2376)
T KOG1202|consen 10 QEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDPRRWEAG--LYGLPKRSGKLKDLNKFDAGFFGVHPKQANTMDPQ 87 (2376)
T ss_pred CCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCccccccc--ccCCchhhcchhhhhhhcccccCcCcccccccCHH
Confidence 5789999999999999999999999999999999999999988 77889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeeec
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVD 191 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv~ 191 (883)
.||+||++|||+-||||.|++++|+++|||+|.+.++....+..++..++.|..+|..++|.+|||||.|+|+|||+.+|
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D 167 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD 167 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh
Confidence 99999999999999999999999999999999999888777777888899999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccccc
Q psy1120 192 SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKD 271 (883)
Q Consensus 192 tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~ 271 (883)
++|||++.|+..|.+.++.|+||.|||+|+++++.|.....|-++|+||++|.|+.||..+|||+++||+++++|.|.+.
T Consensus 168 tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~~ 247 (2376)
T KOG1202|consen 168 TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKSL 247 (2376)
T ss_pred hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCC
Q psy1120 272 AKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTT 351 (883)
Q Consensus 272 A~~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~ 351 (883)
|+|+||.|....+|.||++..++|.|+++.|.++|++.|+.+|++|+++-|||+|||||++|||.|+.+|.++|+..|..
T Consensus 248 ArRvYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGDpQEaN~it~~fC~~Rt~ 327 (2376)
T KOG1202|consen 248 ARRVYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGDPQEANGITRFFCATRTT 327 (2376)
T ss_pred HHHHHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCChHHhhhHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred CeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcCCCCeeeec--------------------
Q psy1120 352 PLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLES-------------------- 411 (883)
Q Consensus 352 ~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~-------------------- 411 (883)
|+.|||+|+|+||.|.|||+..+.|.+++|++|.||||+||++|||.||.+.+++++|-.
T Consensus 328 pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp~~GGivGiNSFGFGGs 407 (2376)
T KOG1202|consen 328 PLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLPWRGGIVGINSFGFGGS 407 (2376)
T ss_pred ceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCCCccCceeeeeccccCCC
Confidence 999999999999999999999999999999999999999999999999988888888710
Q ss_pred ---------------------------------------------CCchHHHHHHHhhhhcCCccCCceeEEEEEcCCch
Q psy1120 412 ---------------------------------------------RPLDAEYVRLFHEIHSDDIAGHMYRGYTILSANSD 446 (883)
Q Consensus 412 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 446 (883)
+..+.+++.++.++.+..+..|++|+|++++..
T Consensus 408 N~HviLks~~~~~P~~tP~~~~~~l~~~sgRT~eAVeqll~~~~~n~~D~~~l~llndi~s~p~~~~pFRGY~vl~~e-- 485 (2376)
T KOG1202|consen 408 NAHVILKSNTKPKPAPTPHAGLLRLVRASGRTPEAVEQLLEQALRNSDDLELLSLLNDIASVPAPLHPFRGYAVLGGE-- 485 (2376)
T ss_pred ceeEEeccCCCCCCCCCCCCCcceeeecCCCCHHHHHHHHHHHhcccchHHHHHHHHHHhcCCccCCcccceEEeccc--
Confidence 001235566777777778888999999999873
Q ss_pred hhhhhcCCCCCCCCCEEEEeCCCCchhhHhhHHHhcChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHH
Q psy1120 447 KKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGI 526 (883)
Q Consensus 447 ~~~~~~~~~~~~~~~v~fvF~GQGsq~~gMg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i 526 (883)
....++...+...+|++|+++|.|+||+||+++|++.+.||+.+.+|++.+++.|+++.+++.+.+++.++++.++..+|
T Consensus 486 ~~~~ev~~~~~~eRPiwfiysGMGsQW~~Ma~~LMkl~~F~dsi~~~ae~l~~~gldv~~vL~~s~~~tfdn~l~sfvsi 565 (2376)
T KOG1202|consen 486 RGGPEVQQVPAGERPIWFIYSGMGSQWAGMAKDLMKLERFRDSIQRSAEVLKPFGLDVIDVLTRSDESTFDNILNSFVSI 565 (2376)
T ss_pred cCCcceeecCCCCcceEEEEeCCcchhhHHHHHHhhhHHHHHHHHHHHhhhcccCcchhhhhcCCChHHHHHHHHHHHHH
Confidence 34456777787889999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred HHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEEcCCHHHHhhcCCC
Q psy1120 527 AAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPP 606 (883)
Q Consensus 527 ~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av~~~~~~v~~~l~~ 606 (883)
.|+|+||.++|...||+||-++|||+||+.++|+-|++|.|+++.++|+||+.+.++...+|+|+|||+++|++...+.+
T Consensus 566 tAiQiaLtDlLs~lgi~PDGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~~l~kGaMAAVGLsWEq~~~~~P~ 645 (2376)
T KOG1202|consen 566 TAIQIALTDLLSCLGIRPDGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDTHLPKGAMAAVGLSWEQCKSRCPP 645 (2376)
T ss_pred HHHHHHHHHHHHhcCCCCCcccccccchhcccccccccCHHHHHHHHHHcCceeccccCCCcchhhhcCCHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999998887777899999999999999999999
Q ss_pred CeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccc
Q psy1120 607 EIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVK 686 (883)
Q Consensus 607 ~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 686 (883)
+++-+|.||.++|+|||+.+.+.++++.|+++|||++.+..+++|||||+| + .+.+ ++++.++ .+.
T Consensus 646 ~~~paCHNs~D~~TiSGp~a~v~~~v~qL~~~gvFak~V~t~G~aFHS~~m---~--a~~p----~l~~~l~-----k~i 711 (2376)
T KOG1202|consen 646 DVVPACHNSKDNVTISGPQASVFAFVEQLRAEGVFAKEVRTGGYAFHSPYM---E--AAAP----PLRQSLE-----KVI 711 (2376)
T ss_pred cccccccCCCCceEecCChHHHHHHHHHhhhcCeeeeEecCCCccccCHHH---H--hhCh----HHHHHHH-----Hhc
Confidence 999999999999999999999999999999999999999999999999999 7 8888 9999999 788
Q ss_pred cCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCCEEEEECCCccchHHHHhhcCCCccEE
Q psy1120 687 FQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNV 766 (883)
Q Consensus 687 ~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~~~iEiGP~~~L~~~i~~~l~~~~~~~ 766 (883)
+.+++.+.+|+|++..+..|..+.+...+++|.++|+++||.|.+|++.+.++.+.|||.||..|..++|+.|+..++++
T Consensus 712 ~epK~rsarWlSTSipEa~W~s~la~tsSA~Y~vnNl~SPVLF~eAlq~vP~nAv~vEiAPH~LlqAiLkRsL~p~~t~v 791 (2376)
T KOG1202|consen 712 PEPKPRSARWLSTSIPEAQWHSSLARTSSAEYHVNNLVSPVLFHEALQHVPENAVVVEIAPHGLLQAILKRSLKPSCTNV 791 (2376)
T ss_pred CCCCCcccchhhccCChhhhcChhhhhcchhhhhhccccHHHHHHHHHhCcccceEEEecchHHHHHHHHhhcCCcccee
Confidence 88899999999999999999988888899999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCcchHHHHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCCccccCCCCCCCCCcccccchhhhhhccCCCeEEEEE
Q psy1120 767 SLTQRENANSVLYLLQALGKLYESGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLKSGERTVVV 846 (883)
Q Consensus 767 ~~~~~~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~~~~~~~~~~~~~~lP~y~w~~~~~W~~~~~~~~~~~~~~~~~~~~ 846 (883)
+.++|++.+..+.||..+|+||..|+.++...+||+..||+++++|+.-|.+-|||+..|..+.+..... +++..+++
T Consensus 792 ~Lmkr~h~~NlEffL~~lgrly~aG~~~qi~~l~p~i~ypv~rGTPmi~~lv~WDHtq~W~~~~f~~gs~--s~~a~~ni 869 (2376)
T KOG1202|consen 792 SLMKRGHRNNLEFFLAGLGRLYAAGIQPQILALFPPIEYPVPRGTPMIGPLVKWDHTQKWLVPKFPGGSG--SSAAIYNI 869 (2376)
T ss_pred hhhcCcccccHHHHHHHHHHHHHccCCccceeccCCCcccCCCCCcCcccccCccccccccccccCCCCC--ccceEEEc
Confidence 9999999999999999999999999999999999999999999999999999999999999887655433 47788999
Q ss_pred EecCCCCCccCCCccCCeeEechHHHHHHHHhc
Q psy1120 847 SLKDDEMEFVSGHMIDGRNLFPATGYLATVCNV 879 (883)
Q Consensus 847 ~l~~~~~p~l~dH~v~g~~v~P~a~y~ema~ea 879 (883)
+++..+.-||.||.++|+++||++||+.+|+..
T Consensus 870 D~~~edd~yL~~HtiDGRvLfPaTGymtlaW~t 902 (2376)
T KOG1202|consen 870 DLSKEDDHYLADHTIDGRVLFPATGYMTLAWKT 902 (2376)
T ss_pred cCCccccceeccceecceEEeccccchhHHHHH
Confidence 999888889999999999999999999999864
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-134 Score=1243.53 Aligned_cols=818 Identities=32% Similarity=0.523 Sum_probs=704.6
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCC-CcccccCCCCCC--------CCCCccccccCCCCCcccCCCChh
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDD-DRRWKLGKEHPE--------IPQRTGKLYEVNKFDAAFFGVHFK 103 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~-~~~~~~~~~~~~--------~~~~~g~~~~~~~fD~~~f~i~~~ 103 (883)
++||||||+||||+++++++||++|.+|+++|++. .+||+...++.. +....|++++++.||+.||||+|+
T Consensus 4 ~~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPr 83 (1061)
T COG3321 4 EPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPR 83 (1061)
T ss_pred CcEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHH
Confidence 34999999999999999999999999999999994 678877643322 234568899999999999999999
Q ss_pred hhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC
Q psy1120 104 QAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV 183 (883)
Q Consensus 104 ~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l 183 (883)
|+..|||||||+|+++|+|||||||.++.+.+++||||+|.+..+|.............+..+|+..+++++||||+|||
T Consensus 84 EA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l 163 (1061)
T COG3321 84 EAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL 163 (1061)
T ss_pred HHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999987655433226677888999999999999999999
Q ss_pred CCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEE
Q psy1120 184 NGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCI 263 (883)
Q Consensus 184 ~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~ 263 (883)
+||+++|||+|||||+|+|+||++|++|+||+||+|||+.+.+|...+.|++.|+||++|+|++||.++|||++|||+|+
T Consensus 164 ~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~ 243 (1061)
T COG3321 164 SGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGV 243 (1061)
T ss_pred CCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHH
Q psy1120 264 MYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQ 339 (883)
Q Consensus 264 vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~ 339 (883)
++||++++|. +||++|+|+++|+||... ++++|+..+|.+++++||+++|++|++|+|||+|||||++|||+|++
T Consensus 244 vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~-gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGDpiE~~ 322 (1061)
T COG3321 244 VVLKRLSDAERDGDRIYAVIRGSAVNQDGRSN-GLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEAN 322 (1061)
T ss_pred EEEEEhHHHHhCCCeEEEEEEeeeeccCCCcC-CCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcCHHHHH
Confidence 9999999996 699999999999999755 99999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCC-CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcCCCCeee---------
Q psy1120 340 ALENVFCPGR-TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQL--------- 409 (883)
Q Consensus 340 Ai~~~f~~~~-~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~--------- 409 (883)
+|.++|+... ..+|.|||+|+||||++.|+|++++||++|+|+|++|||++||++|||.++ |...+++|
T Consensus 323 aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~-~~~sp~~v~~~~~~W~~ 401 (1061)
T COG3321 323 ALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEID-FDSSPFVVPTEATPWPT 401 (1061)
T ss_pred HHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCc-cccCCeEeecCCcCCCC
Confidence 9999998654 679999999999999999999999999999999999999999999999998 66666666
Q ss_pred -----------------------ecCCc-------------------hHHH----HHHHhhhh---------------cC
Q psy1120 410 -----------------------ESRPL-------------------DAEY----VRLFHEIH---------------SD 428 (883)
Q Consensus 410 -----------------------~~~~~-------------------~~~~----~~~~~~~~---------------~~ 428 (883)
++.+. ...+ .+++..+. ..
T Consensus 402 ~~~prrAgvssfG~gGtNaHvIlEe~~~~~~~~~~~~p~~l~lSAk~~~~L~~~a~~l~~~l~~~~~~~~l~dia~Tl~~ 481 (1061)
T COG3321 402 GGGPRRAGVSSFGFGGTNAHVILEEAPPRAESTIPSSPRLLVLSAKTAERLAATAPRLADRLELQGGLLSLADVAYTLQA 481 (1061)
T ss_pred CCCCceeeeeccCCCCCceEEEEeecCCcccCCCCCCCceeeeecCCHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHh
Confidence 21110 0000 01111111 12
Q ss_pred CccCCceeEEEEEcCCchhhhh---hcCC-------C-CC--CCCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHH
Q psy1120 429 DIAGHMYRGYTILSANSDKKIR---SSTH-------Y-PG--DTRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQ 494 (883)
Q Consensus 429 ~~~~~~~r~~~~~~~~~~~~~~---~~~~-------~-~~--~~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~ 494 (883)
.+..+.+|..+|+.+ .++... .+.. . .. ..++++|+|+|||+||.+||++||+ +|+|+++++.|+
T Consensus 482 gR~~~~~R~~~va~~-~eel~~~L~~~~~~~~~~~~~~~~~~~~~~~vfvf~gqgsq~~~mg~el~~~~p~f~~~~~~~~ 560 (1061)
T COG3321 482 GRPHFEHRLAVVAND-REELEAGLRAFAAGKAKALSGVGADDSGKKTVFVFPGQGSQWAGMGRELYALEPVFASAFDALE 560 (1061)
T ss_pred hhhhccceeEEEeCC-HHHHHHHHHHHhcCCCCccceecccCCCCceEEEeCchHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 345677886666554 333322 1111 0 11 1126999999999999999999997 799999999999
Q ss_pred HHhccC-CCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHH
Q psy1120 495 AVLKPK-GVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAA 573 (883)
Q Consensus 495 ~~l~~~-g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv 573 (883)
..+..+ |+++.+.++.+....+..+...||++|++|++|+++|++||++|++|+|||+||++|++++|++|++|+++++
T Consensus 561 ~~~~~~~~~~l~~~i~~~~~~~l~~~~~~Qp~lfai~~ala~l~~s~gv~p~~viGhS~gE~aaA~~aGv~s~~d~~~~v 640 (1061)
T COG3321 561 ALLHRLLGFSLPEVIFAPDYPFLESIDFAQPALFAVSVALAALWRSWGVIPGAVIGHSLGELAAAVAAGVLSLEDALRVV 640 (1061)
T ss_pred HHHHHHcCCcccceecCCCCccccCcchhhhHHHHHHHHHHHHHHhcCCcCccccCcCHHHHHHHHHhccCChhhhhHhh
Confidence 888764 9999998887653336777899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccEEEEcCCH-HHHhhcCC---CCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCC
Q psy1120 574 YYRGLASVETEFIRGAMAAVGLGY-KDLRSRCP---PEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVAN 649 (883)
Q Consensus 574 ~~Rg~~~~~~~~~~G~M~av~~~~-~~v~~~l~---~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~ 649 (883)
..||++|+.. ...|+|++|.++. +++.+++. ..+.||++|+|+++||+|+++++.++...+++.+++++++++ .
T Consensus 641 ~~Rg~lm~~~-~~~G~m~~v~~~~~~~~~~~~~~~~~~v~ia~~n~P~~~vi~g~~~~i~~l~~~~~~~~~~~~~~~v-~ 718 (1061)
T COG3321 641 ATRGRLMQQL-AGEGAMLAVELSLLAEVQELLALGRPQVPLAAVNSPQQVVIAGDPEAIAALIARLQAQGVRARRLAV-S 718 (1061)
T ss_pred hhcchhhccC-CCCcchhhhhcCccchhhHHhhccccceeEEEecCCceEEecCCHHHHHHHHHHHhccCcccceeee-e
Confidence 9999999884 3349999998877 66666655 369999999999999999999999999999999999999999 9
Q ss_pred CccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccH
Q psy1120 650 TEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLF 729 (883)
Q Consensus 650 ~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f 729 (883)
++|||+.| + ++.+ ++...+. .+ .+..|.+|++|++++.. ......+++||.+|+|+||+|
T Consensus 719 ~a~hs~~m---~--~~~~----~~~~~la-----~i--~~~~p~~p~~S~~~~~~----~~~~~~d~~yw~~~~r~~v~f 778 (1061)
T COG3321 719 HAFHSPLM---D--PILD----EFAAALA-----DL--APRPPQIPLISNVTGDL----AGEPGGDAQYWVQHLRQPVRF 778 (1061)
T ss_pred eccccHHH---H--HHHH----HHHHHHh-----hc--ccCCCCcceeeeeeccc----cCCcccCHHHHHHHHHhhccH
Confidence 99999999 8 7777 7777777 43 45789999999999876 134556799999999999999
Q ss_pred HHHHHHhhcC--CEEEEECCCccchHHHHhhcCCCccEEeeccCCCcchHHHHHHHHHHHHHcCCCCCCCCcCCCCCCCC
Q psy1120 730 EETSRHIQKN--AITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLYPKIDFPV 807 (883)
Q Consensus 730 ~~ai~~l~~~--~~~iEiGP~~~L~~~i~~~l~~~~~~~~~~~~~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~~~~~~~ 807 (883)
.++++.+.+. .+|+|+|||+.|+..+++++........+++|+ .++...++..+++||..|+++||..++....
T Consensus 779 ~~~i~~~~~~~~~~f~E~~p~p~l~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~l~~~g~~~dw~~~~~~~~--- 854 (1061)
T COG3321 779 ADAIAAALADGARTFIEVGPGPVLTESIKQTLRDAILSIATLRRD-APELLSFLAALAQLFVAGVAVDWSPLVYGPD--- 854 (1061)
T ss_pred HHHHHHHHhcccceEEEecCCHhHHHHHHHHhhhhhcchhhhccc-ccchhHHHHHHHHHHhcCCCcCcHhhhcCCc---
Confidence 9999999887 489999999999999999986544445556665 4667999999999999999999999887533
Q ss_pred CCCccccCCCCCCCCCcccccchhhh----------hhccCCCeEEEEEEecCCCCCccCCCccCCeeEechHHHHHHHH
Q psy1120 808 SRGTPMISPLVRWEHSEDWYVTTYRM----------QEKLKSGERTVVVSLKDDEMEFVSGHMIDGRNLFPATGYLATVC 877 (883)
Q Consensus 808 ~~~~~~~lP~y~w~~~~~W~~~~~~~----------~~~~~~~~~~~~~~l~~~~~p~l~dH~v~g~~v~P~a~y~ema~ 877 (883)
.+.+.||+|+|+|.++|.+.+... .....++...|...+.....+|+.+|.+....++|+++|+++++
T Consensus 855 --~~~v~lp~~~~q~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1061)
T COG3321 855 --GRLVELPTYPFQRQRFWLDPEALGVASHPLLGAVLGRPSSGEVVLQGSLDLLAVPWLADHDVRNVAALPGAAYVELAL 932 (1061)
T ss_pred --cccccCCCCCceeccccccccccccccccccchhccCCCCccccccccccccccchhhhchhccccccccchhhhhhh
Confidence 225679999999999999874110 01223455667788888888999999999999999999999999
Q ss_pred hccc
Q psy1120 878 NVSE 881 (883)
Q Consensus 878 ea~~ 881 (883)
.+++
T Consensus 933 ~~~~ 936 (1061)
T COG3321 933 AAAD 936 (1061)
T ss_pred hhhh
Confidence 8875
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-127 Score=1239.81 Aligned_cols=746 Identities=23% Similarity=0.346 Sum_probs=620.3
Q ss_pred CCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCC-CcccccCCCCCC--------CCCCccccccCCCCCcccCCCC
Q psy1120 31 PGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDD-DRRWKLGKEHPE--------IPQRTGKLYEVNKFDAAFFGVH 101 (883)
Q Consensus 31 ~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~-~~~~~~~~~~~~--------~~~~~g~~~~~~~fD~~~f~i~ 101 (883)
..++||||||||+||++.++++||++|.+|+++|++. .+||+.+.++.. ...+.|+++++ +||+.||||+
T Consensus 5 ~~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v-~FD~~~F~i~ 83 (2582)
T TIGR02813 5 KDMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEV-DFNPMEFGLP 83 (2582)
T ss_pred CCCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCcc-CCCHhhcCCC
Confidence 4478999999999999999999999999999999995 579987643322 22456778777 4999999999
Q ss_pred hhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------------h---------h----
Q psy1120 102 FKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------------F---------Y---- 155 (883)
Q Consensus 102 ~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------------~---------~---- 155 (883)
+++++.|||+|||+|+++|+||+||||..+ ++++|||||+|++.+++.... . .
T Consensus 84 p~ea~~mDpqqrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (2582)
T TIGR02813 84 PNILELTDISQLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLI 162 (2582)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhh
Confidence 999999999999999999999999999754 788999999998766432100 0 0
Q ss_pred -----hhhccCCccccccchhhHHHHHHHhhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH
Q psy1120 156 -----EKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS 230 (883)
Q Consensus 156 -----~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~ 230 (883)
.....++..++|++.|++++|||+.|||+||+++|++||||||+||++||++|++|+||+|||||++..++|..+
T Consensus 163 ~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~ 242 (2582)
T TIGR02813 163 KKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMY 242 (2582)
T ss_pred hhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHH
Confidence 001123456789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHH
Q psy1120 231 LQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLL 306 (883)
Q Consensus 231 ~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i 306 (883)
..|++.++||++++|||||.++|||++|||+|++||||+++|+ +|||+|+|+++|+||+ ..++++|+..+|.++|
T Consensus 243 ~~fs~~~~lS~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~-~~~itaP~~~gq~~~i 321 (2582)
T TIGR02813 243 MSFSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGK-FKSIYAPRPEGQAKAL 321 (2582)
T ss_pred HHHHhccCcCCCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCC-CCCCcCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999996 6999999999999996 4589999999999999
Q ss_pred HHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCC--CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 307 EDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGR--TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 307 ~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~--~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
++||++||++|+||+|||+|||||++||++|++||.++|+..+ ..+++|||+|+||||+++|||++++||++++|+|+
T Consensus 322 ~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~ 401 (2582)
T TIGR02813 322 KRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHK 401 (2582)
T ss_pred HHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999997533 35799999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCeee----------------------------------ecC-Cc---------------
Q psy1120 385 IIPPNINFKSPRKDIPSFHNGKIQL----------------------------------ESR-PL--------------- 414 (883)
Q Consensus 385 ~ipp~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~-~~--------------- 414 (883)
+|||++||++|||+++ +.++++++ ++. +.
T Consensus 402 ~iPp~~~~~~pnp~~~-~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~~~~~~~~~~~~~~~~~~ 480 (2582)
T TIGR02813 402 VLPPTINVDQPNPKLD-IENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYSPKHQRDDQYRQRAVAQT 480 (2582)
T ss_pred CcCCCCCCCCCCCCCC-ccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecCccccccccccccCCcce
Confidence 9999999999999987 34333222 110 00
Q ss_pred -------hHHHH----HHHhhhhc------------------CCccCCceeEEEEEcCCchhhhh-------hcCC----
Q psy1120 415 -------DAEYV----RLFHEIHS------------------DDIAGHMYRGYTILSANSDKKIR-------SSTH---- 454 (883)
Q Consensus 415 -------~~~~~----~~~~~~~~------------------~~~~~~~~r~~~~~~~~~~~~~~-------~~~~---- 454 (883)
...+. .+...+.. .....+.+|..+++.+ .++... .+..
T Consensus 481 ~~lSA~~~~aL~~~l~~~~~~l~~~~~~~~~~~~~la~~~t~~~~~~~~~R~a~va~~-~~el~~~L~~a~~~l~~~~~~ 559 (2582)
T TIGR02813 481 LLFTAANEKALVSSLKDWKNKLSAKADDQPYAFNALAVENTLRTIAVALARLGFVAKN-ADELITMLEQAITQLEAKSCE 559 (2582)
T ss_pred eeecCCCHHHHHHHHHHHHHHHhcccccccccHHHHHHHhhhcccccCCceEEEEECC-HHHHHHHHHHHHHhhhccccc
Confidence 00011 11111100 0112345675444443 222111 1100
Q ss_pred ---------CC-----CCCCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccC-CCChHHHhccC-------
Q psy1120 455 ---------YP-----GDTRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPK-GVDVKRIITDT------- 511 (883)
Q Consensus 455 ---------~~-----~~~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~-g~~l~~~l~~~------- 511 (883)
+. ...++++|||||||+||+|||++||+ +|.||+.+++|++++... +.+|.++++..
T Consensus 560 ~~~~~~g~~~~~~~~~~~~~kvaflFpGQGSQy~gMgreL~~~~P~fr~~ld~~d~~l~~~~~~~L~~~l~p~~~~~~~~ 639 (2582)
T TIGR02813 560 EWQLPSGISYRKSALVVESGKVAALFAGQGSQYLNMGRELACNFPEVRQAAADMDSVFTQAGKGALSPVLYPIPVFNDES 639 (2582)
T ss_pred cccccccccccccccccCCCceEEEeCCCCchhHHHHHHHHhcCHHHHHHHHHHHHHhhhhcCCcHHHHhcccccccccc
Confidence 00 12468999999999999999999996 899999999999999775 66787776521
Q ss_pred ---CCccchhhhhHHHHHHHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccccc--c
Q psy1120 512 ---NPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEF--I 586 (883)
Q Consensus 512 ---~~~~l~~~~~~qp~i~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~--~ 586 (883)
.++.+.++.++||+||++|++++++|++|||+|++|+|||+|||+|+|+||+||++|++++++.||++|.+... .
T Consensus 640 ~~~~~~~L~~t~~aQPaI~a~q~Al~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAGvls~edal~Lv~~Rg~lm~~~~~~~~ 719 (2582)
T TIGR02813 640 RKAQEEALTNTQHAQSAIGTLSMGQYKLFTQAGFKADMTAGHSFGELSALCAAGVISDDDYMMLAFSRGQAMAAPTGEAD 719 (2582)
T ss_pred ccchhhhhccchhHHHHHHHHHHHHHHHHHHcCCccceeecCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCC
Confidence 12347889999999999999999999999999999999999999999999999999999999999999986532 3
Q ss_pred cccEEEEcCC----HHHHhhcCC--CCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcc
Q psy1120 587 RGAMAAVGLG----YKDLRSRCP--PEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCR 660 (883)
Q Consensus 587 ~G~M~av~~~----~~~v~~~l~--~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~ 660 (883)
.|.|++|.++ .+++++.+. ++|+|||+|||+|+||||+.++|+++.+.|+++|+++++|+| ++||||++|
T Consensus 720 ~G~M~AV~l~~~~~~~~v~~~l~~~~~V~IA~~NsP~qvVISG~~~ai~~l~~~L~~~Gi~a~~L~V-s~AFHSplm--- 795 (2582)
T TIGR02813 720 IGFMYAVILAVVGSPTVIANCIKDFEGVSIANYNSPTQLVIAGVSTQIQIAAKALKEKGFKAIPLPV-SGAFHTPLV--- 795 (2582)
T ss_pred CceeEEEEccccccHHHHHHHhccCCCEEEEEEecCCCEEEECCHHHHHHHHHHHHhCCCeEEECCC-CCCcCcHHH---
Confidence 6899999654 566777665 469999999999999999999999999999999999999999 999999999
Q ss_pred cCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC
Q psy1120 661 AQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA 740 (883)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~ 740 (883)
+ ++.+ +|++.+. .+. ++.|.+|+||+++|..+.. ......+||++|+++||+|.++|+.|.+++
T Consensus 796 ~--~a~~----~f~~~L~-----~i~--~~~P~ipv~SnvtG~~~~~---~~~~i~~~~~~ql~~PV~F~~aIe~l~~~G 859 (2582)
T TIGR02813 796 A--HAQK----PFSAAID-----KAK--FNTPLVPLYSNGTGKLHSN---DAAAIKKALKNHMLQSVHFSEQLEAMYAAG 859 (2582)
T ss_pred H--HHHH----HHHHHHh-----hCC--CCCCCceEEECCCCeEecC---chhhHHHHHHHHhhCeecHHHHHHHHHHCC
Confidence 7 7766 8888887 444 3678999999999986532 122357999999999999999999999875
Q ss_pred --EEEEECCCccchHHHHhhcCCC---ccEEeeccCCCcchHHHHHHHHHHHHHcCCCCCCCCcCC
Q psy1120 741 --ITLEIAPHGLLQAILRRSLPKT---VTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLYP 801 (883)
Q Consensus 741 --~~iEiGP~~~L~~~i~~~l~~~---~~~~~~~~~~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~ 801 (883)
+|||+|||++|+++++++++.. ...++...+.+.++..+|++++++||++|+++||-..+.
T Consensus 860 ~~~FVEiGPg~vLt~lv~~il~~~~~~~~~v~~~~~~~~~~~~~l~~a~~~L~~~G~~v~~~~~~~ 925 (2582)
T TIGR02813 860 ARVFVEFGPKNILQKLVENTLKDKENELCAISINPNPKGDSDMQLRQAAVQLAVLGLELTEIDPYQ 925 (2582)
T ss_pred CCEEEEcCCcHHHHHHHHHHhhccCCCeeEEeeccCCCCCHHHHHHHHHHHHHHCCCCCCCccccc
Confidence 7999999999999999999643 223444433345678899999999999999999877664
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-64 Score=570.65 Aligned_cols=359 Identities=22% Similarity=0.369 Sum_probs=318.5
Q ss_pred CCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCCh
Q psy1120 31 PGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDP 110 (883)
Q Consensus 31 ~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp 110 (883)
..++|+|||||+++|.|.++++||++|.+|++++++.+ +|+...+ .....| .+++||+.+| +++++++.|||
T Consensus 2 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~-~~~~~~~---~~~~~g---~i~~~~~~~~-~~~~~~~~~d~ 73 (414)
T PRK08722 2 SKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIE-HFDTTNF---STRFAG---LVKDFNCEEY-MSKKDARKMDL 73 (414)
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecC-ccccccC---CCceeE---EcCCCChhHc-CCHHHHhhcCH
Confidence 34789999999999999999999999999999998754 3443311 112223 3456999888 99999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHhhCC
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYWLGV 183 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~~~l 183 (883)
++++++.++++||+|||++++..+..|+|||+|++.+++.... ......++++.+++.+.|.++++||+.||+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 9999999999999999998777778899999999877653211 122345677888999999999999999999
Q ss_pred CCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----CCCCCCCcccCCCCcccc
Q psy1120 184 NGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRS 258 (883)
Q Consensus 184 ~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~~~G~~~g 258 (883)
+||+++|+++|+||+.||+.|+++|++|+||+|||||+|...++..+..|..+++++ |++.|||||.+++|+++|
T Consensus 154 ~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~g 233 (414)
T PRK08722 154 RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLG 233 (414)
T ss_pred CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEee
Confidence 999999999999999999999999999999999999999999999999999999997 457999999999999999
Q ss_pred cceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCC
Q psy1120 259 EAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332 (883)
Q Consensus 259 EGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~ 332 (883)
||++++||+++++|+ ++|++|+|++.++|+.+ ++.| .+.++.++|+++|+++|++|+||||||+|||||+.
T Consensus 234 EGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~ 310 (414)
T PRK08722 234 DGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYH---MTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPA 310 (414)
T ss_pred ceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCC---CCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCC
Confidence 999999999999986 59999999999999864 4445 56677999999999999999999999999999999
Q ss_pred CcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 333 gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+|++|+.||.++|++...++++|+|+|+++||+++|||+++++|++++|++++|||++|+++|+|.++
T Consensus 311 ~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~ 378 (414)
T PRK08722 311 GDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLD 378 (414)
T ss_pred CCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 99999999999997543457899999999999999999999999999999999999999999999886
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-63 Score=572.93 Aligned_cols=359 Identities=27% Similarity=0.421 Sum_probs=314.6
Q ss_pred CCCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCC-ccccccCCCCCcccCCCChhhhhcC
Q psy1120 30 APGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQR-TGKLYEVNKFDAAFFGVHFKQAHTM 108 (883)
Q Consensus 30 ~~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~fD~~~f~i~~~~~~~~ 108 (883)
++.++|||||||+++|+|.++++||++|.+|++++++.+ +|+... ++.+ .| .+.+|+...| +++++.+.|
T Consensus 126 ~~~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~-~f~~~~----~~~~~ag---~i~~f~~~~~-l~~k~~r~m 196 (540)
T PLN02787 126 TKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIE-RFDCSQ----FPTRIAG---EIKSFSTDGW-VAPKLSKRM 196 (540)
T ss_pred CCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccC-ccchhh----CCccccc---cccccChhhc-CCHHHHHhC
Confidence 344799999999999999999999999999999999764 343321 2222 23 3456887766 899999999
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCC---CCCCCceEEEEccCCCchhhhh------hhhhhccCCccccccchhhHHHHHHH
Q psy1120 109 DPMCRIILEKTYEAVIDAGINPK---SLRGSKTGVFIGACFSESEKTW------FYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 109 dp~~rl~l~aa~eALedAG~~~~---~~~~~~~gv~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
||++++++.++++||+|||++++ .+++.|+|||+|++.++..... ......++++.+.....++.+++|++
T Consensus 197 d~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~ 276 (540)
T PLN02787 197 DKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAM 276 (540)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHH
Confidence 99999999999999999999764 5677899999999877643211 11223456676777778889999999
Q ss_pred hhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----CCCCCCCcccCCCC
Q psy1120 180 WLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANG 254 (883)
Q Consensus 180 ~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~~~G 254 (883)
.||++||+++|++||+||+.||+.|+++|++|+||++||||+|..++|..+..|..++.|+ |++.|||||.++||
T Consensus 277 ~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdG 356 (540)
T PLN02787 277 DLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDG 356 (540)
T ss_pred HhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCC
Confidence 9999999999999999999999999999999999999999999989999999999999887 56789999999999
Q ss_pred cccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC
Q psy1120 255 YCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330 (883)
Q Consensus 255 ~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt 330 (883)
|++|||++++|||++++|+ +|||+|+|++.++|+++ .....|++.++.++|++||+++|++|+|||||++|||||
T Consensus 357 fv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~-~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT 435 (540)
T PLN02787 357 FVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYH-MTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATST 435 (540)
T ss_pred cccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCC-CCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccC
Confidence 9999999999999999996 59999999999999975 233456788899999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 331 ~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+.||..|.+||.++|+. ..+++|+|+|+++||+++|||++++++++++|++++|||++|+++|+|.++
T Consensus 436 ~~gD~~E~~Ai~~~Fg~--~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~ 503 (540)
T PLN02787 436 KAGDLKEYQALMRCFGQ--NPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVD 503 (540)
T ss_pred CCCCHHHHHHHHHHhCC--CCCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCC
Confidence 99999999999999974 246899999999999999999999999999999999999999999999886
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-62 Score=550.63 Aligned_cols=354 Identities=24% Similarity=0.326 Sum_probs=309.0
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcc-cccCCCCCCCCC-CccccccCCCCCcccCCCChhhhhcCC
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRR-WKLGKEHPEIPQ-RTGKLYEVNKFDAAFFGVHFKQAHTMD 109 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~-~~~~~~~~~~~~-~~g~~~~~~~fD~~~f~i~~~~~~~~d 109 (883)
.++|+|||||+++|+|.+.++||++|.+|++++++.+.. +.. +..+. ..|.+ ..+||+. +++++++.||
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~----~~~~~~~~g~i--~~~~d~~---~~~~~~~~~d 81 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEE----FDLPVRIGGHL--LEEFDHQ---LTRVELRRMS 81 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhc----cCCCcceEEEe--ccCcccc---CCHHHHhhcc
Confidence 379999999999999999999999999999999875432 111 11222 23444 2467753 7899999999
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHhhC
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYWLG 182 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~~~ 182 (883)
|++|+++.++++||||||++ ..+..|+||++|++.++...... .....++++.+...+.|.++.++++.++
T Consensus 82 ~~~~~~l~aa~~AledAg~~--~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 159 (418)
T PRK07910 82 YLQRMSTVLGRRVWENAGSP--EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERH 159 (418)
T ss_pred HHHHHHHHHHHHHHHHcCCC--CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhC
Confidence 99999999999999999984 35678999999998765432211 1122345566677888899999999999
Q ss_pred CCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCC-CC-----CCCCCCCcccCCCCcc
Q psy1120 183 VNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGV-LS-----PDGRCKSFDEAANGYC 256 (883)
Q Consensus 183 l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~-ls-----~~g~~~pfd~~~~G~~ 256 (883)
++||+++++++|+||+.||++|+++|++|+||++||||+|..++|..+..|.++++ ++ +++.|||||.+++|++
T Consensus 160 ~~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v 239 (418)
T PRK07910 160 AKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFV 239 (418)
T ss_pred CCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEe
Confidence 99999999999999999999999999999999999999999999999999999998 77 6789999999999999
Q ss_pred cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~ 332 (883)
+|||++++||+++++|+ +||++|+|+++++||++ ...+.|++.++.++|++||+++|++|+||||||+|||||+.
T Consensus 240 ~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~-~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~ 318 (418)
T PRK07910 240 FGEGGALMVIETEEHAKARGANILARIMGASITSDGFH-MVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSV 318 (418)
T ss_pred eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCC
Confidence 99999999999999986 59999999999999975 34556788899999999999999999999999999999999
Q ss_pred CcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 333 gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
||++|.+||+++|+.. .++|+|+|+++||+++|||++++++++++|++++|||++|+++|||.++
T Consensus 319 ~D~~E~~Al~~~fg~~---~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~ 383 (418)
T PRK07910 319 GDVAEGKAINNALGGH---RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEID 383 (418)
T ss_pred CCHHHHHHHHHHhCCC---CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 9999999999999742 3468999999999999999999999999999999999999999999987
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-62 Score=557.61 Aligned_cols=360 Identities=25% Similarity=0.333 Sum_probs=315.6
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCc-ccccCCCCCCCCCCcccccc-----CCCCCcccCCCChhhh
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDR-RWKLGKEHPEIPQRTGKLYE-----VNKFDAAFFGVHFKQA 105 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~-----~~~fD~~~f~i~~~~~ 105 (883)
.++|+|||||+++|.|.++++||++|++|++.+.+.+. +|... .....|.+++ .+.||+.+| ++++++
T Consensus 3 ~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~~-----~~~~~g~i~~~~~~~~~~fd~~~~-i~~~~~ 76 (424)
T PRK06333 3 KKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDL-----ATKIGGQVPDLAEDAEAGFDPDRY-LDPKDQ 76 (424)
T ss_pred CCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCC-----CCceEEEeccccccccccCChhHc-CCHHHH
Confidence 47899999999999999999999999999999988543 33221 1123344443 224999988 999999
Q ss_pred hcCChHHHHHHHHHHHHHHHCCCCCCCC-CCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHH
Q psy1120 106 HTMDPMCRIILEKTYEAVIDAGINPKSL-RGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRV 177 (883)
Q Consensus 106 ~~~dp~~rl~l~aa~eALedAG~~~~~~-~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~i 177 (883)
+.|||+++++++++++||+|||++++.+ +..++|||+|++.+++..... .....+.++.+.+...|..+++|
T Consensus 77 ~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 156 (424)
T PRK06333 77 RKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHV 156 (424)
T ss_pred hhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHH
Confidence 9999999999999999999999998877 678999999998776543211 11224456677788889999999
Q ss_pred HHhhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC------CCCCCCcccC
Q psy1120 178 SYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP------DGRCKSFDEA 251 (883)
Q Consensus 178 s~~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~------~g~~~pfd~~ 251 (883)
|+.|||+||+++|+++|+||+.||+.|+++|++|+||++||||+|.++++.....|..++.++. ++.|+|||.+
T Consensus 157 s~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~ 236 (424)
T PRK06333 157 SIRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRD 236 (424)
T ss_pred HHHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999988888999888873 4689999999
Q ss_pred CCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q psy1120 252 ANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHG 327 (883)
Q Consensus 252 ~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hg 327 (883)
++|+++|||++++||+++++|+ +||++|+|++.++|+++. ....|++.++.++|++||++||++|+||||||+||
T Consensus 237 ~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~-~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hg 315 (424)
T PRK06333 237 RDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHM-TAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHA 315 (424)
T ss_pred CCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCC-CCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccC
Confidence 9999999999999999999985 599999999999998652 22346788999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 328 TGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 328 tgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|||+.+|+.|+.+|.++|+. ..+++|+|+|+++||+++|||++++++++++|++++|||++|+++|+|.++
T Consensus 316 tgt~~~D~~E~~al~~~fg~--~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~ 386 (424)
T PRK06333 316 TSTPVGDLGEVAAIKKVFGH--VSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAE 386 (424)
T ss_pred CCCccchHHHHHHHHHHhCC--CCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcc
Confidence 99999999999999999973 457899999999999999999999999999999999999999999999876
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-62 Score=548.39 Aligned_cols=352 Identities=24% Similarity=0.302 Sum_probs=311.9
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+|||||+++|+|.++++||++|.+|++++++.+ +|+... ++ ....| .+.+||+.+ .+++++.+.|||++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~-~~~~~~-~~--~~~~g---~i~~~~~~~-~~~~~~~~~~d~~~ 72 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPIT-RFDPSG-YP--ARLAG---EVPDFDAAE-HLPGRLLPQTDRMT 72 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCC-cccccc-CC--CceeE---EeCCcChhh-cCCHHHHhhCCHHH
Confidence 479999999999999999999999999999999753 454432 11 11122 345688876 49999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHhhCCCC
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYWLGVNG 185 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G 185 (883)
|+++.++++||+|||++++.+++.|+||++|++.+++.... .......+++...+.+.+.++++|++.||++|
T Consensus 73 ~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G 152 (399)
T cd00832 73 RLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRG 152 (399)
T ss_pred HHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCC
Confidence 99999999999999999888888999999999887654211 11233456666777788899999999999999
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC----CCCCCCcccCCCCcccccce
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP----DGRCKSFDEAANGYCRSEAV 261 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~----~g~~~pfd~~~~G~~~gEGa 261 (883)
|+++|+++|+||+.||++|+++|++|+ |++||||+|..++|..+..|..++.++. ++.|||||.+++|+++|||+
T Consensus 153 p~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~G~~~gEGa 231 (399)
T cd00832 153 PSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGG 231 (399)
T ss_pred CcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCCCEeeeceE
Confidence 999999999999999999999999999 9999999999999999999999999974 35899999999999999999
Q ss_pred EEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHH
Q psy1120 262 CIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEE 337 (883)
Q Consensus 262 ~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E 337 (883)
+++|||++++|+ +||++|+|++.++|+.+. + +++.++.++|++||+++|++|+|||||++|||||+.+|+.|
T Consensus 232 ~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~---~-~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E 307 (399)
T cd00832 232 AILVLEDAAAARERGARVYGEIAGYAATFDPPPG---S-GRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAE 307 (399)
T ss_pred EEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCC---C-CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHH
Confidence 999999999996 599999999999998752 2 46889999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 338 VQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 338 ~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
..||+++|+. ..++|+|.|+++||+++|||++++++++++|++++|||++|+++|+|.++
T Consensus 308 ~~al~~~fg~---~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~ 367 (399)
T cd00832 308 AAALAAVFGP---RGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYG 367 (399)
T ss_pred HHHHHHHhCC---CCCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCC
Confidence 9999999974 25789999999999999999999999999999999999999999999876
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >KOG1394|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-62 Score=500.97 Aligned_cols=358 Identities=26% Similarity=0.418 Sum_probs=318.7
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCC-CccccccCCCCCcccCCCChhhhhcCCh
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQ-RTGKLYEVNKFDAAFFGVHFKQAHTMDP 110 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~fD~~~f~i~~~~~~~~dp 110 (883)
.++|+|||||+++|.|.++..+|++|.+|+++|+.... ++ +...|. ..| .|..|+..-| +++...+.|++
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~-~d----~k~~p~~v~g---~Ip~f~~e~~-~s~~~~r~ms~ 93 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEG-PD----YKSIPFTVAG---KIPRFSVEDY-VSKGDERRMSK 93 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccc-cc----cccCcchhee---eccccccccc-cchhhhhhhhH
Confidence 57899999999999999999999999999999997543 11 222333 233 3456887766 89999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCC---CCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHh
Q psy1120 111 MCRIILEKTYEAVIDAGINPK---SLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYW 180 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~---~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~ 180 (883)
...+++.+++|||+|||+.+. +.+..++||.+|+++++...... .....++||.++..+.||.++.||..
T Consensus 94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~ 173 (440)
T KOG1394|consen 94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK 173 (440)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhh
Confidence 999999999999999999765 33457899999999998765332 23557899999999999999999999
Q ss_pred hCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC-----CCCCCCcccCCCCc
Q psy1120 181 LGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP-----DGRCKSFDEAANGY 255 (883)
Q Consensus 181 ~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~~~G~ 255 (883)
+||+||+.++.|||++|..+|..|.+.|+.|++|++|+||+|..++|....+|.+++.||. .-.|||||.++|||
T Consensus 174 ~gl~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGF 253 (440)
T KOG1394|consen 174 YGLRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGF 253 (440)
T ss_pred hcCcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCce
Confidence 9999999999999999999999999999999999999999999999999999999999985 33799999999999
Q ss_pred ccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCC
Q psy1120 256 CRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTK 331 (883)
Q Consensus 256 ~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~ 331 (883)
|+|||+|++|||++|+|+ +|||++.|++.++|.+|.. -..|++.+...+|++||++||+.|+||+||.+|+|.|+
T Consensus 254 VmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT-~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~ 332 (440)
T KOG1394|consen 254 VMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHIT-SPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTP 332 (440)
T ss_pred eeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccC-CCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCc
Confidence 999999999999999997 4999999999999998832 22356888999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 332 VGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 332 ~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+||..|.+||.++|++... ..+|.|+|+.|||++||||.++.|.++++++++.+||++|++.|++..+
T Consensus 333 ~GD~aE~~Ai~~vf~~~~~-~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d 400 (440)
T KOG1394|consen 333 LGDAAEAEAIKRVFGEHNI-ASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVD 400 (440)
T ss_pred CchHHHHHHHHHHhccCCc-ccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccc
Confidence 9999999999999986433 2389999999999999999999999999999999999999999998665
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-60 Score=533.74 Aligned_cols=348 Identities=23% Similarity=0.360 Sum_probs=304.1
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCC-ccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQR-TGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
++|+|||||+++|.|.++++||++|++|+++|++.++.+... ++.+ .|.+ .||+..+ ++++..+.||+.
T Consensus 2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~~~~-----~~~~~~g~~----~~~~~~~-~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMG-----MRSQVWGNV----KLDPTGL-IDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCcccccC-----CCCceEEEc----CCChhhc-CCHHHhhcCCHH
Confidence 589999999999999999999999999999999765433221 1222 2222 3777655 788889999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh--------hhhhccCCccccccchhhHHHHHHHhhCC
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF--------YEKLQINGFGITGCSRAMLANRVSYWLGV 183 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~is~~~~l 183 (883)
+++++.++.+||+|||+.++++++.++|||+|++.++...... .....++++.+++.+.++++++|++.||+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 9999999999999999988888888999999998766432111 12234677788889999999999999999
Q ss_pred CCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC------CCCCCCCcccCCCCccc
Q psy1120 184 NGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFDEAANGYCR 257 (883)
Q Consensus 184 ~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls------~~g~~~pfd~~~~G~~~ 257 (883)
+||+++|+++|+||+.||..|+++|++|+||++||||+|. +.+.....|..++.++ |++.|||||.+++|+++
T Consensus 152 ~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~ 230 (406)
T PRK07967 152 KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVI 230 (406)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceee
Confidence 9999999999999999999999999999999999999997 4556667788888886 56789999999999999
Q ss_pred ccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCC
Q psy1120 258 SEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333 (883)
Q Consensus 258 gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~g 333 (883)
|||++++|||++++|+ +||++|+|++.++|+++ ++.|++.++.++|++||+.++ + ||||||+|||||+.+
T Consensus 231 gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~---~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~~~ 304 (406)
T PRK07967 231 AGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYD---MVAPSGEGAVRCMQMALATVD--T-PIDYINTHGTSTPVG 304 (406)
T ss_pred eceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCC---CCCCCHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCCCC
Confidence 9999999999999986 59999999999999964 788999999999999998755 5 999999999999999
Q ss_pred cHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 334 D~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|++|+.||+++|+. ..++|+|+|+++||+++|||++++++++++|++++|||++|+++++|++.
T Consensus 305 D~~E~~Ai~~~fg~---~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~ 368 (406)
T PRK07967 305 DVKELGAIREVFGD---KSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAA 368 (406)
T ss_pred CHHHHHHHHHHhCC---CCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCcccc
Confidence 99999999999964 24689999999999999999999999999999999999999999998763
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-60 Score=539.90 Aligned_cols=365 Identities=23% Similarity=0.339 Sum_probs=312.6
Q ss_pred CCCCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCC-cccccCCCC--------CCCCC-Cccccc---cCCCCCc
Q psy1120 29 PAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDD-RRWKLGKEH--------PEIPQ-RTGKLY---EVNKFDA 95 (883)
Q Consensus 29 ~~~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~-~~~~~~~~~--------~~~~~-~~g~~~---~~~~fD~ 95 (883)
+.+.++||||||||++|+|.++++||++|++|++++++.+ .+|....++ ...+. ..|.++ ++.+||+
T Consensus 2 ~~~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~ 81 (437)
T PLN02836 2 PLPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDE 81 (437)
T ss_pred CCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCCh
Confidence 3567899999999999999999999999999999999854 455433211 11122 223332 3467999
Q ss_pred ccCCCChhhhhcCChHHHHHHHHHHHHHHHCCCCCCC-CCCCceEEEEccCCCchhhhhh-------hhhhccCCccccc
Q psy1120 96 AFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKS-LRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITG 167 (883)
Q Consensus 96 ~~f~i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~-~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~ 167 (883)
.+|.. .+.||+..+++++++++||+|||+.+.+ .+..++||++|++.+....... .....++++.+++
T Consensus 82 ~~~~~----~~~~~~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (437)
T PLN02836 82 ELWLN----SRSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPR 157 (437)
T ss_pred HHhcc----ccccCHHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhh
Confidence 88855 3468999999999999999999997654 4667999999998765433211 1223567778889
Q ss_pred cchhhHHHHHHHhhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC------C
Q psy1120 168 CSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------P 241 (883)
Q Consensus 168 ~~~~~~a~~is~~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls------~ 241 (883)
.+.|+++++||+.||++||+++|+++|+||+.||+.|+++|++|+||++||||+|..+++..+..|..++.++ +
T Consensus 158 ~~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p 237 (437)
T PLN02836 158 ILINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCP 237 (437)
T ss_pred hcccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCc
Confidence 9999999999999999999999999999999999999999999999999999999989998888898888776 4
Q ss_pred CCCCCCcccCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCC
Q psy1120 242 DGRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEV 315 (883)
Q Consensus 242 ~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl 315 (883)
++.|+|||.+++|+++|||++++||+++++|+ ++|++|+|++.++|+.+ ++.| ++.++.+++++||++||+
T Consensus 238 ~~~~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~---~~~p~~~~~~~~~a~~~Al~~Agi 314 (437)
T PLN02836 238 TEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHH---ITQPHEDGRGAVLAMTRALQQSGL 314 (437)
T ss_pred ccccCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCC---CcCCCcchHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999986 59999999999999854 5555 466778999999999999
Q ss_pred CCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCC-CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCC
Q psy1120 316 DPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGR-TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKS 394 (883)
Q Consensus 316 ~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~-~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~ 394 (883)
+|+||||||+|||||+.||..|.+||.++|+... ...++|+|+|+++||+++|||++++++++++|++++|||++|+++
T Consensus 315 ~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~ 394 (437)
T PLN02836 315 HPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLER 394 (437)
T ss_pred CHhHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCC
Confidence 9999999999999999999999999999997532 246899999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q psy1120 395 PRKDIP 400 (883)
Q Consensus 395 ~~~~~~ 400 (883)
|||.++
T Consensus 395 ~~p~~~ 400 (437)
T PLN02836 395 PDPIFD 400 (437)
T ss_pred CCCCCC
Confidence 999987
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-59 Score=532.54 Aligned_cols=353 Identities=25% Similarity=0.343 Sum_probs=315.4
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCC-CccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQ-RTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
++|+|||||+++|.|.++++||++|++|+++|++.+. |.... .+. ..| .+.+||+..| +++++++.||++
T Consensus 2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~-~~~~~----~~~~~~g---~i~~f~~~~~-~~~~~~~~~~~~ 72 (406)
T PRK08439 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITL-FDASD----FPVQIAG---EITDFDPTEV-MDPKEVKKADRF 72 (406)
T ss_pred CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCCC-ccccC----CCCceeE---EcCCcChhhc-CCHHHHhhcCHH
Confidence 5799999999999999999999999999999997643 33221 111 223 3567999888 899999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHhhCCC
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYWLGVN 184 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~ 184 (883)
++++++++++||+|||+++++++..++||++|+..++..... ......++++.++....|+++++|++.||++
T Consensus 73 ~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 152 (406)
T PRK08439 73 IQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLK 152 (406)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCC
Confidence 999999999999999999888888999999998776543211 1123356777888899999999999999999
Q ss_pred CceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----CCCCCCCcccCCCCccccc
Q psy1120 185 GPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRSE 259 (883)
Q Consensus 185 Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~~~G~~~gE 259 (883)
||++++.++|+|++.||+.|+++|++|+||++||||+|..++|..+..|..++.|+ |++.|+|||.+++|+++||
T Consensus 153 Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gE 232 (406)
T PRK08439 153 GPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGE 232 (406)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeC
Confidence 99999999999999999999999999999999999999999999999999999998 4578999999999999999
Q ss_pred ceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcH
Q psy1120 260 AVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDP 335 (883)
Q Consensus 260 Ga~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~ 335 (883)
|++++|||++++|+ +||++|.|++.++|+++ ++.|+..++.++|++||+++|+ +||||||+|||||+.+|.
T Consensus 233 Ga~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~---~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~ 307 (406)
T PRK08439 233 GAGALVLEEYESAKKRGAKIYAEIIGFGESGDANH---ITSPAPEGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDK 307 (406)
T ss_pred ceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCC---CCCCCHHHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCH
Confidence 99999999999986 59999999999998753 7889999999999999999999 799999999999999999
Q ss_pred HHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 336 EEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 336 ~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
.|..||.++|+.. ...++|+|+|+++||+.+|||++++++++++|++++|||++|+++|+|.++
T Consensus 308 ~E~~al~~~f~~~-~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~ 371 (406)
T PRK08439 308 NETAALKELFGSK-EKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECD 371 (406)
T ss_pred HHHHHHHHHhccc-CCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCC
Confidence 9999999999753 245689999999999999999999999999999999999999999999886
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-60 Score=537.81 Aligned_cols=358 Identities=26% Similarity=0.395 Sum_probs=313.0
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+||||||++|+|.++++||++|++|++++++.+. |+... + .....| .+.+||+.+| +++++++.|||++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~-~~~~~-~--~~~~~g---~i~~f~~~~~-~~~~~~~~~~~~~ 73 (411)
T PRK07314 2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITH-FDTSD-L--AVKIAG---EVKDFNPDDY-MSRKEARRMDRFI 73 (411)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCc-ccccC-C--CccEEE---EeCCcChhhc-CCHHHhhcCCHHH
Confidence 5899999999999999999999999999999987543 32221 1 112223 3457999888 9999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHhhCCCC
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYWLGVNG 185 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G 185 (883)
+|+++++++||+|||++++++++.++|||+|++.++...... .....+.++.+++...+..++++++.||++|
T Consensus 74 ~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G 153 (411)
T PRK07314 74 QYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKG 153 (411)
T ss_pred HHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999998765432111 1123345666778888999999999999999
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC-----CCCCCCcccCCCCcccccc
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP-----DGRCKSFDEAANGYCRSEA 260 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~~~G~~~gEG 260 (883)
|+++|+++|+||+.||+.|+++|++|+||+|||||+|.+++|.....|..++.++. ++.|+|||.++||+++|||
T Consensus 154 p~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geG 233 (411)
T PRK07314 154 PNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEG 233 (411)
T ss_pred ccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEce
Confidence 99999999999999999999999999999999999999999988889998888764 6789999999999999999
Q ss_pred eEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHH
Q psy1120 261 VCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPE 336 (883)
Q Consensus 261 a~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~ 336 (883)
++++||+++++|+ ++|++|+|++.++|+.+. ....+.+.++.+++++||+++|++|+||||||+|||||+.+|..
T Consensus 234 AaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~-~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~ 312 (411)
T PRK07314 234 AGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHM-TAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDKA 312 (411)
T ss_pred EEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCC-CCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccccHH
Confidence 9999999999886 589999999999998642 22234567799999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 337 EVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 337 E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|.++|.++|+. +..+++|+++|+++||+++|||+++++|++++|++++|||++||++|+|+++
T Consensus 313 E~~al~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~ 375 (411)
T PRK07314 313 ETQAIKRVFGE-HAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECD 375 (411)
T ss_pred HHHHHHHHhcc-cCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCC
Confidence 99999999974 3357999999999999999999999999999999999999999999999876
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-59 Score=530.48 Aligned_cols=352 Identities=23% Similarity=0.329 Sum_probs=304.3
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCC-CccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQ-RTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
++|||||||+++|.|.+.++||++|.+|+++|++.++ |... ...+. ..|. +.+||...+ +++++.+.||+.
T Consensus 2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~-~~~~---~~~~~~~~~~---v~~~~~~~~-~~~~~~r~~~~~ 73 (405)
T PRK09116 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPE-WDRY---DGLNTRLAAP---IDDFELPAH-YTRKKIRSMGRV 73 (405)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCc-hhhc---cCCCCceEEE---ecCcChhHh-cCHHHHhhCCHH
Confidence 5899999999999999999999999999999998653 3221 11222 2232 345776654 788999999999
Q ss_pred HHHHHHHHHHHHHHCCCCC-CCCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHhhCC
Q psy1120 112 CRIILEKTYEAVIDAGINP-KSLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYWLGV 183 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~-~~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~~~l 183 (883)
+++++.++++||+|||+.. ..++..|+||++|++.+..+.... .....++++.+...++|.++++|++.||+
T Consensus 74 ~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 74 SLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 9999999999999999954 345667999999998765432111 11223455566677888999999999999
Q ss_pred CCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----CCCCCCCcccCCCCcccc
Q psy1120 184 NGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRS 258 (883)
Q Consensus 184 ~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~~~G~~~g 258 (883)
+||+++|+++|+||+.||+.|+++|++|+||++||||+|. +++.....|..++.++ |+..|||||.+++|+++|
T Consensus 154 ~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~g 232 (405)
T PRK09116 154 KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIG 232 (405)
T ss_pred CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeee
Confidence 9999999999999999999999999999999999999998 6777777787777654 456899999999999999
Q ss_pred cceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCc
Q psy1120 259 EAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGD 334 (883)
Q Consensus 259 EGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD 334 (883)
||++++|||++++|+ +||++|+|++.++|+.+ ++.|+..++.++|+++|+++|++|+||+||++|||||+.||
T Consensus 233 EGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~---~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D 309 (405)
T PRK09116 233 EGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH---VTQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGD 309 (405)
T ss_pred ccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCc---CCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCC
Confidence 999999999999986 59999999999999864 77899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 335 PEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 335 ~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+.|..||.++|+. .++|+|+|+++||+++|||++++++++++|++++|||++|+++|+|+++
T Consensus 310 ~~E~~Ai~~~fg~----~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~ 371 (405)
T PRK09116 310 IAESQATAAVFGA----RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACG 371 (405)
T ss_pred HHHHHHHHHHhCC----CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCc
Confidence 9999999999974 4789999999999999999999999999999999999999999999884
|
|
| >PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-60 Score=519.75 Aligned_cols=309 Identities=31% Similarity=0.481 Sum_probs=270.4
Q ss_pred EEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhcc-CCCChHHHhccCCC-ccchhhhhHHHHHHHHHHHHHHHHHH
Q psy1120 463 WFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKP-KGVDVKRIITDTNP-KMFDNILNSFVGIAAIQIGLVDILRA 539 (883)
Q Consensus 463 ~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~-~g~~l~~~l~~~~~-~~l~~~~~~qp~i~a~qial~~ll~~ 539 (883)
+|||||||+||+|||++||+ +|.||+.+++|++++++ .|+++.+++.+++. ..+.++.++||+||++|+|++++|++
T Consensus 1 vFlFpGQGsq~~gMg~~L~~~~p~f~~~~~~~~~~l~~~~g~~l~~~l~~~~~~~~l~~~~~~qpai~~~~~al~~~l~~ 80 (318)
T PF00698_consen 1 VFLFPGQGSQYPGMGRDLYENNPVFRETIDRCDEILKELLGFSLLELLFEGPESEDLNDTEYAQPAIFAIQVALARLLRS 80 (318)
T ss_dssp EEEE--TTS--TTTTHHHHHH-HHHHHHHHHHHHHHTSHHTS-HHHHHHHTTHCHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEECCcchhhHhHHHHHHHcChhhHHHHHhhhhhhhcccccchhhhhhcccccccccchheecchhhhhhhhhhhhhcc
Confidence 69999999999999999997 79999999999999988 49999999987664 56899999999999999999999999
Q ss_pred cCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEEcCCHHHHhhcCCCCeEEeeecCCCcE
Q psy1120 540 LNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVACHNSPDSS 619 (883)
Q Consensus 540 ~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av~~~~~~v~~~l~~~v~iA~~Nsp~~~ 619 (883)
+|++||+++|||+|||+|+|+||++|+||++++++.|+++|.+.. ..|.|++|.....+......++++|||+|+|+|+
T Consensus 81 ~Gi~P~~v~GhSlGE~aA~~aaG~ls~e~a~~lv~~R~~~m~~~~-~~g~m~av~~~~~~~~~~~~~~v~ia~~Ns~~q~ 159 (318)
T PF00698_consen 81 WGIKPDAVIGHSLGEYAALVAAGALSLEDALRLVYERARLMDEAA-PPGAMLAVRGEEEEEKLALPPDVEIANINSPRQV 159 (318)
T ss_dssp TTHCESEEEESTTHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHS-TSEEEEEEESHHHHHHHHTTTTEEEEEEEETTEE
T ss_pred cccccceeeccchhhHHHHHHCCccchhhhhhhHHHHHHHHHHhh-hcccccchhhhHHhhhccccccceeeeecccccc
Confidence 999999999999999999999999999999999999999998754 7899999987544444446678999999999999
Q ss_pred EEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEec
Q psy1120 620 TISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLST 699 (883)
Q Consensus 620 visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S~ 699 (883)
||||+.++|+++.+.|+++|++++.|++ ++|||||+| + ++.+ ++++.+. . ...++|++|++|+
T Consensus 160 visG~~~~l~~~~~~l~~~~~~~~~l~v-~~afHs~~m---~--~~~~----~~~~~l~-----~--~~~~~p~ip~~S~ 222 (318)
T PF00698_consen 160 VISGEREALEALVERLKAEGIKAKRLPV-SYAFHSPLM---E--PAAD----EFREALE-----S--IEFRPPKIPVYSN 222 (318)
T ss_dssp EEEEEHHHHHHHHHHHHHTTSEEEEESS-SSETTSGGG---H--HHHH----HHHHHHH-----T--SCSCCCSSEEEET
T ss_pred ccCCCHHHHHHHHHHhhccceeEEEeee-eccccCchh---h--hhHH----HHHhhhh-----c--cccccccccceee
Confidence 9999999999999999999999999999 999999999 7 6666 7887777 4 3457899999999
Q ss_pred ccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcC----CCccEEeeccCCC
Q psy1120 700 SNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLP----KTVTNVSLTQREN 773 (883)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~----~~~~~~~~~~~~~ 773 (883)
+++.... ......+||++|+++||+|.++++.+.+.+ +|||||||++|+++++++++ ....+++++.|+.
T Consensus 223 ~~g~~~~----~~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~fiEiGP~~~L~~~~~~~l~~~~~~~~~~i~~~~~~~ 298 (318)
T PF00698_consen 223 VTGRPYD----DPELIAEYWARQLRSPVRFREAVEALYEDGVRVFIEIGPGSVLTSLVKRILKSENGSDATLIPSLRRGH 298 (318)
T ss_dssp TTSSBEH----SHHHHHHHHHHHHHSHEEHHHHHHHHHHTTEEEEEEESSSSHHHHHHHHHSTSETTTTSEEEESEBTTB
T ss_pred ccccccc----ccccchhHHHhccCCcCChHHHHHHHHhcCCCEEEEeCchHHHHHHHHHHHhhccCCCeEEEeccCCCC
Confidence 9988652 222367999999999999999999998775 68999999999999999997 3567788888875
Q ss_pred cchHHHHHHHHHHHHHcCCCC
Q psy1120 774 ANSVLYLLQALGKLYESGVHP 794 (883)
Q Consensus 774 ~~~~~~ll~~l~~L~~~G~~v 794 (883)
++..++++++++||++|++|
T Consensus 299 -~~~~~~~~~l~~l~~~Gv~~ 318 (318)
T PF00698_consen 299 -DDLDTFLQALAQLFVSGVAV 318 (318)
T ss_dssp -SCHHHHHHHHHHHHHTT-HH
T ss_pred -ChHHHHHHHHHHHHHcCCCC
Confidence 67999999999999999863
|
3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A .... |
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-59 Score=530.39 Aligned_cols=358 Identities=27% Similarity=0.448 Sum_probs=314.0
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+|||||+++|+|.+.++||++|++|++.+.+.+. |+... ++ ....| .+.+||+.+| +++++.+.|||++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~-~~~~~-~~--~~~~g---~i~~f~~~~~-~~~~~~~~~~~~~ 72 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITR-FDASD-LP--VKIAG---EVKDFDPEDY-IDKKEARRMDRFI 72 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECCc-ccccC-CC--CcEEE---EeCCcChhhc-CCHHHHhhcCHHH
Confidence 4799999999999999999999999999999987643 43321 11 11223 3557999999 9999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHhhCCCC
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYWLGVNG 185 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G 185 (883)
+|+++++++||+|||+++++++..++|||+|++.+++..... .....++++.+++...+.++++|++.||++|
T Consensus 73 ~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g 152 (407)
T TIGR03150 73 QYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKG 152 (407)
T ss_pred HHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999988765432211 1123456667788888999999999999999
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC-----CCCCCCcccCCCCcccccc
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP-----DGRCKSFDEAANGYCRSEA 260 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~~~G~~~gEG 260 (883)
|+++|+++|+||+.||++|+++|++|+||++||||+|.+++|.....|...+.++. .+.|+|||.+++|+++|||
T Consensus 153 ~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g~~~gEG 232 (407)
T TIGR03150 153 PNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEG 232 (407)
T ss_pred cccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCcEEEece
Confidence 99999999999999999999999999999999999999999998888998888874 4579999999999999999
Q ss_pred eEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHH
Q psy1120 261 VCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPE 336 (883)
Q Consensus 261 a~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~ 336 (883)
++++||+++++|+ ++|++|+|++.++|+.+. ....|.+.++.+++++||+++|++|+||||||+|||||+.+|++
T Consensus 233 AaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~-~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~ 311 (407)
T TIGR03150 233 AGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHI-TAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKA 311 (407)
T ss_pred EEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCC-CCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHH
Confidence 9999999999885 589999999999998642 22234577899999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 337 EVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 337 E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|+.++.++|+.. ..+++|+++|+++||+++|||++++++++++|++++|||++||++|+|.++
T Consensus 312 E~~a~~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~ 374 (407)
T TIGR03150 312 ETKAIKRVFGDH-AYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECD 374 (407)
T ss_pred HHHHHHHHhccC-CCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 999999999742 347999999999999999999999999999999999999999999999887
|
FabB sequences should fall well below the noise cutoff of this model. |
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-57 Score=522.67 Aligned_cols=376 Identities=46% Similarity=0.782 Sum_probs=334.6
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCC-cccccCCCC-------CCCCCCccccccCCCCCcccCCCChhh
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDD-RRWKLGKEH-------PEIPQRTGKLYEVNKFDAAFFGVHFKQ 104 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~-~~~~~~~~~-------~~~~~~~g~~~~~~~fD~~~f~i~~~~ 104 (883)
++|||||||+++|+|.+.++||++|.+|++++++.+ .+|....++ .......|.+.+++.||+.+|++++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~ 80 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPRE 80 (421)
T ss_pred CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecceecCCcccCCHhHcCCCHHH
Confidence 479999999999999999999999999999999864 466543211 112234566777778999999999999
Q ss_pred hhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC
Q psy1120 105 AHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN 184 (883)
Q Consensus 105 ~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~ 184 (883)
++.|||+++|+++++++||+|||+++++++..++||++|+..+++..........++++...+...+..++++++.+|++
T Consensus 81 ~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~ 160 (421)
T cd00833 81 AEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR 160 (421)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC
Confidence 99999999999999999999999999888889999999998887665544444446777788888899999999999999
Q ss_pred CceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEE
Q psy1120 185 GPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIM 264 (883)
Q Consensus 185 Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~v 264 (883)
||+++++++|+|++.||+.|+++|++|+||++||||++.+.++.....|..++.+++++.|+|||.+++|+++|||++++
T Consensus 161 g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (421)
T cd00833 161 GPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240 (421)
T ss_pred CCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEE
Confidence 99999999999999999999999999999999999999988898899999999999999999999999999999999999
Q ss_pred EEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHH
Q psy1120 265 YLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQA 340 (883)
Q Consensus 265 vL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~A 340 (883)
||+++++|+ ++|++|+|++.++|+.+ .....|+..++.+++++||+++|++++||||||+|||||+.+|..|.++
T Consensus 241 vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~-~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~a 319 (421)
T cd00833 241 VLKRLSDALRDGDRIYAVIRGSAVNQDGRT-KGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEA 319 (421)
T ss_pred EEeeHHHHHHCCCeEEEEEEEEEEcCCCCC-CCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHH
Confidence 999999885 58999999999999854 3455688999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCC--CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcCCCCeeee
Q psy1120 341 LENVFCPGR--TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLE 410 (883)
Q Consensus 341 i~~~f~~~~--~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~ 410 (883)
|.++|+... ..+++++++|+++||+.+|||++++++++++|+++.+||++|+++|+|.++ +....+.+.
T Consensus 320 l~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~-~~~~~~~~~ 390 (421)
T cd00833 320 LAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKID-FEESPLRVP 390 (421)
T ss_pred HHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCC-cccCCeEee
Confidence 999997532 357899999999999999999999999999999999999999999999998 455555543
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-57 Score=520.22 Aligned_cols=375 Identities=44% Similarity=0.750 Sum_probs=334.7
Q ss_pred EEEEecceeccCCCCHHHHHHHHhcCCCcccCCC-cccccCCCCC---------CCCCCccccccCCCCCcccCCCChhh
Q psy1120 35 ICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDD-RRWKLGKEHP---------EIPQRTGKLYEVNKFDAAFFGVHFKQ 104 (883)
Q Consensus 35 iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~-~~~~~~~~~~---------~~~~~~g~~~~~~~fD~~~f~i~~~~ 104 (883)
|+|||||+++|.+.+.++||++|.+|++++++.+ ++|....+++ ......|.+.++..||+..|++++++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~ 80 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE 80 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence 7899999999999999999999999999999854 5776542211 11223445556667999999999999
Q ss_pred hhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC
Q psy1120 105 AHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN 184 (883)
Q Consensus 105 ~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~ 184 (883)
.+.||++++|+++++.+||+|||++++++++.++|||+|+...+|...........+++.+.+.+.+..+++|+..||++
T Consensus 81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~ 160 (424)
T smart00825 81 AEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR 160 (424)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999989999999998877766555555556677778888899999999999999
Q ss_pred CceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEE
Q psy1120 185 GPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIM 264 (883)
Q Consensus 185 Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~v 264 (883)
||+++|+++|+|++.||..|+++|++|++|++||||++...++.....|...+.+++++.|+|||.+++|+++|||++++
T Consensus 161 g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (424)
T smart00825 161 GPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVV 240 (424)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEE
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred EEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHH
Q psy1120 265 YLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQA 340 (883)
Q Consensus 265 vL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~A 340 (883)
||+++++|+ ++|++|+|++.++++.+ .+++.|+..++.++++++|+++|++++|||||++|||||+.+|..|.++
T Consensus 241 VLe~~e~A~~~g~~i~a~I~g~~~~~~~~~-~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~a 319 (424)
T smart00825 241 VLKRLSDALRDGDPILAVIRGSAVNQDGRS-NGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEA 319 (424)
T ss_pred EEccHHHHHHCCCeEEEEEEEEEEeCCCCC-CCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHH
Confidence 999999885 48999999999999864 3677799999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCC--CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcCCCCeeeec
Q psy1120 341 LENVFCPGR--TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLES 411 (883)
Q Consensus 341 i~~~f~~~~--~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 411 (883)
|.++|+... ..+++|+++|+++||+.+|||++++++++++|++++|||++|+++|+|.++ +...++.+..
T Consensus 320 l~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~-~~~~~~~~~~ 391 (424)
T smart00825 320 LAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHID-LEESPLRVPT 391 (424)
T ss_pred HHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-cccCceEccC
Confidence 999997422 356899999999999999999999999999999999999999999999998 5656666544
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-57 Score=515.57 Aligned_cols=350 Identities=27% Similarity=0.345 Sum_probs=306.7
Q ss_pred cEEEEecceeccCCCC---HHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcC--
Q psy1120 34 EICITGIAGVFPDSTD---VRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTM-- 108 (883)
Q Consensus 34 ~iaI~G~g~~~P~g~~---~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~-- 108 (883)
+|+|||||+++|.|.+ +++||++|.+|++++++.+... .. + .....|. ++.|| +++++.+.+
T Consensus 2 ~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~-~~--~--~~~~~g~---i~~~~-----~~~~~~~~~~~ 68 (407)
T cd00828 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SR--F--DRGVAGQ---IPTGD-----IPGWDAKRTGI 68 (407)
T ss_pred CEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc-cc--C--CccEEEE---ccCCC-----cCHHHHHhccC
Confidence 7999999999999999 9999999999999999754322 11 1 1122332 33444 778888888
Q ss_pred -ChHHHHHHHHHHHHHHHCCCCCCC-CCCCceEEEEccCCCchhhhhhhhh---hccCCccccccch--hhHHHHHHHhh
Q psy1120 109 -DPMCRIILEKTYEAVIDAGINPKS-LRGSKTGVFIGACFSESEKTWFYEK---LQINGFGITGCSR--AMLANRVSYWL 181 (883)
Q Consensus 109 -dp~~rl~l~aa~eALedAG~~~~~-~~~~~~gv~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~a~~is~~~ 181 (883)
||+++++++++++||+|||+++++ ++..++||++|++.+++........ ...+++..+..+. ++++++|++.|
T Consensus 69 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (407)
T cd00828 69 VDRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILL 148 (407)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHh
Confidence 999999999999999999999888 8889999999998876654322211 2356667777777 99999999999
Q ss_pred CC-CCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCC-----CCCCCcccCCCCc
Q psy1120 182 GV-NGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPD-----GRCKSFDEAANGY 255 (883)
Q Consensus 182 ~l-~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~-----g~~~pfd~~~~G~ 255 (883)
|+ +||+++|+++|+|++.||+.|+++|++|+||++||||+|.+. |..+..|..++.++.+ +.|+|||.+++|+
T Consensus 149 gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~G~ 227 (407)
T cd00828 149 LSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMSRPFDETRDGF 227 (407)
T ss_pred CcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCcccCCCcCCCCcE
Confidence 99 999999999999999999999999999999999999999977 8888999999999864 6899999999999
Q ss_pred ccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCC
Q psy1120 256 CRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTK 331 (883)
Q Consensus 256 ~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~ 331 (883)
++|||++++|||++++|+ +||++|.|++.++|+.+.. ... ++.++.++|++||+++|++|+||||||+|||||+
T Consensus 228 ~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~-~~~-~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~ 305 (407)
T cd00828 228 VEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRS-VPA-GGKGIARAIRTALAKAGLSLDDLDVISAHGTSTP 305 (407)
T ss_pred EeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCC-CCC-ChHHHHHHHHHHHHHcCCCHHHcCEEecccccCc
Confidence 999999999999999986 5999999999999987532 232 7899999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 332 VGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 332 ~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
.+|+.|.+||.++|+... .+++|+|+|+++||+++|||++++++++++|++++|||++|+++|||+++
T Consensus 306 ~~D~~E~~ai~~~~~~~~-~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 373 (407)
T cd00828 306 ANDVAESRAIAEVAGALG-APLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVE 373 (407)
T ss_pred cccHHHHHHHHHHHhccC-CCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCcccc
Confidence 999999999999997532 57899999999999999999999999999999999999999999999875
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-56 Score=512.61 Aligned_cols=358 Identities=28% Similarity=0.441 Sum_probs=314.0
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+||||||++|+|.+.++||++|++|++++++.+..+... + .....| .+..||.. |.+++++++.|||++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~--~--~~~~~~---~i~~~~~~-~~~~~~~~~~~~~~~ 72 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASG--F--PSRIAG---EVPDFDPE-DYLDRKELRRMDRFA 72 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccccC--C--CccEEE---EcCCCChh-hcCCHHHhccCCHHH
Confidence 479999999999999999999999999999999865432211 1 112223 34567776 679999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHhhCCCC
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYWLGVNG 185 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G 185 (883)
+|+++++++||+|||+++++++..++||++|++.+++..... .....++++.+.+...+.++++|++.||++|
T Consensus 73 ~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g 152 (406)
T cd00834 73 QFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRG 152 (406)
T ss_pred HHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999998876543221 1122355666777788889999999999999
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCC-----CCCCCcccCCCCcccccc
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPD-----GRCKSFDEAANGYCRSEA 260 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~-----g~~~pfd~~~~G~~~gEG 260 (883)
|+++|+++|+|++.||+.|+++|++|+||.|||||+|..++|..+..|..++.++.+ +.|+|||.+++|+++|||
T Consensus 153 ~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~g~~~geG 232 (406)
T cd00834 153 PNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEG 232 (406)
T ss_pred cccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCCCEeeecc
Confidence 999999999999999999999999999999999999998889999999999999876 579999999999999999
Q ss_pred eEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHH
Q psy1120 261 VCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPE 336 (883)
Q Consensus 261 a~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~ 336 (883)
++++||++.++|+ ++|++|+|++.++|+.+. ....|...++.++++++|+++|++++||||||+|||||+.+|.+
T Consensus 233 A~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~-~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~ 311 (406)
T cd00834 233 AGVLVLESLEHAKARGAKIYAEILGYGASSDAYHI-TAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAA 311 (406)
T ss_pred EEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCC-CCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHH
Confidence 9999999999886 499999999999998642 22334589999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 337 EVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 337 E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|.+||.++|+.. .++++|++.|+++||+++|||+++++|++++|++++|||++||++|||..+
T Consensus 312 E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~ 374 (406)
T cd00834 312 ESKAIKRVFGEH-AKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECD 374 (406)
T ss_pred HHHHHHHHhccc-CCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 999999999742 457999999999999999999999999999999999999999999998554
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=510.61 Aligned_cols=353 Identities=22% Similarity=0.326 Sum_probs=302.4
Q ss_pred eeccCCCCHHHHHHHHhcCCCcccCCCc-ccccCCC----------CCCCCCC-ccccccCCCCCcccCCCChhhhhcCC
Q psy1120 42 GVFPDSTDVRDFGEKLNNKVDLISDDDR-RWKLGKE----------HPEIPQR-TGKLYEVNKFDAAFFGVHFKQAHTMD 109 (883)
Q Consensus 42 ~~~P~g~~~~~~w~~l~~g~~~~~~~~~-~~~~~~~----------~~~~~~~-~g~~~~~~~fD~~~f~i~~~~~~~~d 109 (883)
+++|.|.++++||++|++|++++++.++ +|+...+ ....+.+ .|.+. ..+||+.+|+..++ +|
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~-~~~f~~~~~~~~~~----~~ 75 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVD-QSEFDPSDFAPTKR----ES 75 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECC-cccCChhHcCCccc----CC
Confidence 4689999999999999999999987543 3222111 1112222 23332 23799988865543 59
Q ss_pred hHHHHHHHHHHHHHHHCCCC-CCCCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHhh
Q psy1120 110 PMCRIILEKTYEAVIDAGIN-PKSLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYWL 181 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~-~~~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~~ 181 (883)
++++|++.++++||+|||++ +++++..++||++|++.+++..... .....++++.+++.+.|.++++||+.|
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 99999999999999999998 7888888999999998876543211 123345677788999999999999999
Q ss_pred CCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC------CCCCCCCcccCCCCc
Q psy1120 182 GVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFDEAANGY 255 (883)
Q Consensus 182 ~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls------~~g~~~pfd~~~~G~ 255 (883)
||+||+++|+++|+||+.||++|+++|++|+||++||||+|..++|..+..|.+++.++ +++.|+|||.+++|+
T Consensus 156 ~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G~ 235 (421)
T PTZ00050 156 KLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGF 235 (421)
T ss_pred CCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCCE
Confidence 99999999999999999999999999999999999999999988999888999988876 456899999999999
Q ss_pred ccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEEecCCC
Q psy1120 256 CRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSE-CEVDPKNLAWIEAHGTGT 330 (883)
Q Consensus 256 ~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~-agl~~~dI~~ve~hgtgt 330 (883)
++|||++++|||++++|+ +||++|+|++.++|+.+ .....|++.++.++|++||++ ||++|+||||||+|||||
T Consensus 236 ~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt 314 (421)
T PTZ00050 236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHH-ITAPHPDGRGARRCMENALKDGANININDVDYVNAHATST 314 (421)
T ss_pred eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCC-CCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccC
Confidence 999999999999999986 59999999999999864 233446788999999999999 999999999999999999
Q ss_pred CCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 331 ~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+.+|.+|.+++.++|+....++++|+|+|+++||+++|||++++++++++|++++|||++||++|+|.++
T Consensus 315 ~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~ 384 (421)
T PTZ00050 315 PIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECD 384 (421)
T ss_pred CCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCC
Confidence 9999999999999997543367999999999999999999999999999999999999999999999876
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-56 Score=506.54 Aligned_cols=355 Identities=20% Similarity=0.303 Sum_probs=299.2
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCccccc--CC--CCCCCCCCccccccCCCCCcccCCCChhhhhcC
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKL--GK--EHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTM 108 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~--~~--~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~ 108 (883)
++|||||||+++|.|.+.++||++|++|++++++.++.... +. .........|. +++||...+ ++++..+.|
T Consensus 2 ~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~r~~ 77 (410)
T PRK07103 2 DEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAE---LDSLALPER-LDAKLLRRA 77 (410)
T ss_pred CCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCcccccccccccccCCCceEEEE---eCCCChhhc-CCHHHhhcC
Confidence 68999999999999999999999999999999985432111 00 00001112233 344555444 788889999
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh------hhhhccCCccccccchhhHHHHHHHhhC
Q psy1120 109 DPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF------YEKLQINGFGITGCSRAMLANRVSYWLG 182 (883)
Q Consensus 109 dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~a~~is~~~~ 182 (883)
|+.+++++.++++||+|||++ ..+..++|||+|++......... .......++.....+++.++++|++.||
T Consensus 78 ~~~~~lal~Aa~eAl~dAgl~--~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 155 (410)
T PRK07103 78 SLSAQAALAAAREAWRDAALG--PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFG 155 (410)
T ss_pred CHHHHHHHHHHHHHHHhcCcC--CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhC
Confidence 999999999999999999995 34667999999987543221111 1122334555566677889999999999
Q ss_pred CCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-------CCCCCCCcccCCCCc
Q psy1120 183 VNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-------PDGRCKSFDEAANGY 255 (883)
Q Consensus 183 l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-------~~g~~~pfd~~~~G~ 255 (883)
++||+++++++|+|++.||+.|+++|++|+||+|||||++..+++.....|..++.++ |++.|+|||.+++|+
T Consensus 156 l~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG~ 235 (410)
T PRK07103 156 IRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGF 235 (410)
T ss_pred CCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCCe
Confidence 9999999999999999999999999999999999999999889999999999888875 457899999999999
Q ss_pred ccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCC
Q psy1120 256 CRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTK 331 (883)
Q Consensus 256 ~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~ 331 (883)
++|||++++||+++++|+ +||++|+|++.++|+++ ++.|+..++.+++++||+++|++|+||||||+|||||+
T Consensus 236 v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~---~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 236 IYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR---GPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSP 312 (410)
T ss_pred eEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCC---CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCC
Confidence 999999999999999986 59999999999999865 67899999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCC-CCCCC
Q psy1120 332 VGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP-RKDIP 400 (883)
Q Consensus 332 ~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~-~~~~~ 400 (883)
.+|+.|.+|| |+. ...+++|+|.|+++||+.+|||++++++++++|++++|||++|+++| +|.++
T Consensus 313 ~~D~~E~~al---~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~ 378 (410)
T PRK07103 313 LGDETELAAL---FAS-GLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFR 378 (410)
T ss_pred CCCHHHHHHH---hcC-CCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcC
Confidence 9999999999 332 23468999999999999999999999999999999999999999998 67665
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-56 Score=493.11 Aligned_cols=354 Identities=26% Similarity=0.394 Sum_probs=307.5
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
.++|+|||+|.++|.|.+.+++|++|..|++++..+.+ |+... .+.+. ..++..| ..+ +++++.+.||+.
T Consensus 2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~-~~~~~----~~~~~--~~~i~~~-~~~--~~~~~~~~~d~~ 71 (412)
T COG0304 2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITR-FDASG----LGVKI--AGEIKDL-DDQ--IAKKERRFMDRF 71 (412)
T ss_pred CceEEEecceeeecccCCHHHHHHHHhcCCCCCCcccc-ccccC----CCCcc--ccccccc-ccc--cchHHhhcccHH
Confidence 36899999999999999999999999999998886543 33321 11111 1234444 222 677888899999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCC-ceEEEEccCCCchhhhhh-------hhhh-ccCCccccccchhhHHHHHHHhhC
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGS-KTGVFIGACFSESEKTWF-------YEKL-QINGFGITGCSRAMLANRVSYWLG 182 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~-~~gv~~g~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~a~~is~~~~ 182 (883)
++|++.++.+||+|||+.. ..... |+||++|++.++...... .... .++++..+..+.++.++.++..||
T Consensus 72 ~~~a~~Aa~eAl~dAgl~~-~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g 150 (412)
T COG0304 72 SQLAVVAAVEALEDAGLDN-ELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFG 150 (412)
T ss_pred HHHHHHHHHHHHHHcCCCc-ccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhC
Confidence 9999999999999999982 22223 899999999877653211 1222 378999999999999999999999
Q ss_pred CCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCC-----CCCCCcccCCCCccc
Q psy1120 183 VNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPD-----GRCKSFDEAANGYCR 257 (883)
Q Consensus 183 l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~-----g~~~pfd~~~~G~~~ 257 (883)
++||++++.+||+||..||..|++.|+.|++|++||||+|..+++.....|..++.||.+ ..|||||.++|||+.
T Consensus 151 ~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~RdGfv~ 230 (412)
T COG0304 151 LKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVI 230 (412)
T ss_pred CCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999864 589999999999999
Q ss_pred ccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCC
Q psy1120 258 SEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333 (883)
Q Consensus 258 gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~g 333 (883)
|||+|++|||++++|+ +||++|.|++.++|++|. ....|.+++..++|+.||++||++|+|||||.+|||||+.+
T Consensus 231 gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~-t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~n 309 (412)
T COG0304 231 GEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHI-TAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPAN 309 (412)
T ss_pred ecceeEEEecChhhHHhCCCceEEEEEEEEeccccccc-CCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc
Confidence 9999999999999997 599999999999999873 23334599999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCC
Q psy1120 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKD 398 (883)
Q Consensus 334 D~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~ 398 (883)
|..|..||+++|+.. ...++|.|.|+.+||+.||+|+.++|.++++|+++++||++|+++|+|.
T Consensus 310 D~~E~~ai~~vfg~~-~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~ 373 (412)
T COG0304 310 DKAESLAIKRVFGEH-AKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPE 373 (412)
T ss_pred cHHHHHHHHHHhccc-ccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcc
Confidence 999999999999753 3458999999999999999999999999999999999999999999984
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-55 Score=490.56 Aligned_cols=333 Identities=19% Similarity=0.182 Sum_probs=280.1
Q ss_pred CCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCC-cccccCCCCCCCCCCccccccCCCCCcccCCCChh-hhhcC
Q psy1120 31 PGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDD-RRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFK-QAHTM 108 (883)
Q Consensus 31 ~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~-~~~~~ 108 (883)
..++|+|||||+++|.|.++++||++|.+|+++ +..+ .+|.. .+. ....+ +|...+ ++++ +.+.|
T Consensus 4 ~~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~------~~~--~~~~~---~~~~~~-~~~~~~~r~~ 70 (398)
T PRK06519 4 QPNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAP------YPV--HPLPE---IDWSQQ-IPKRGDQRQM 70 (398)
T ss_pred CCCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccC------cCc--ccccc---cChhhc-CCchhhhhcc
Confidence 356899999999999999999999999999997 2111 11111 111 11112 222222 5555 77899
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------------------hhhhhccCCccccccc
Q psy1120 109 DPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------------------FYEKLQINGFGITGCS 169 (883)
Q Consensus 109 dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 169 (883)
|+.+++++.++.+||+|||++....+..++||++|++.+...... ......++++.++.++
T Consensus 71 ~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 150 (398)
T PRK06519 71 ETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQL 150 (398)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhh
Confidence 999999999999999999997655556799999999877543211 0122346788889999
Q ss_pred hhhHHHHHHHhhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCC-c
Q psy1120 170 RAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKS-F 248 (883)
Q Consensus 170 ~~~~a~~is~~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~p-f 248 (883)
+|.++++||+.||++||++||+++|+||+.||.+|+++|++|+||++||||+|..++|..+..|..++.++.+ .|+| |
T Consensus 151 ~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~-~~~p~~ 229 (398)
T PRK06519 151 SNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKG-GWAPVW 229 (398)
T ss_pred hhHHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCC-CCCchh
Confidence 9999999999999999999999999999999999999999999999999999998999999999999999864 5666 6
Q ss_pred cc---CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy1120 249 DE---AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLA 321 (883)
Q Consensus 249 d~---~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~ 321 (883)
|. +++||++|||++++|||++++|+ +|||+|.|++.+.++ .+..++.++|++||++||+ ++|||
T Consensus 230 d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~--------~~~~~~~~am~~AL~~Agl-~~~Id 300 (398)
T PRK06519 230 SRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRAR--------RAPGDLEASLERLLKPAGG-LAAPT 300 (398)
T ss_pred ccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCC--------CChHHHHHHHHHHHHHCCC-cccCC
Confidence 66 69999999999999999999986 599999999643321 1346889999999999999 89999
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCC
Q psy1120 322 WIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392 (883)
Q Consensus 322 ~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~ 392 (883)
||++|||||+.+|..|..||+++|+ .+|+|+|+++||+.+|||++++++++++|++++|||++|+
T Consensus 301 yI~ahgtgT~~~D~~E~~Ai~~~f~------~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~ 365 (398)
T PRK06519 301 AVISGATGAHPATAEEKAALEAALA------GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDA 365 (398)
T ss_pred EEEeCCCCCCCccHHHHHHHHHHcC------CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCC
Confidence 9999999999999999999999994 4699999999999999999999999999999999999997
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-55 Score=492.29 Aligned_cols=335 Identities=21% Similarity=0.352 Sum_probs=283.7
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+|||||+++|.|. .++||++|++|+++|++.+... . .+ .|...+++..+ ..+ .
T Consensus 2 ~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~-~---~~-------------~~~~~~~~~~~---~~~---~ 57 (381)
T PRK05952 2 MKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFP-E---LP-------------PLPLGLIGNQP---SSL---E 57 (381)
T ss_pred CeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCccc-c---cc-------------cccceeecccc---ccc---c
Confidence 5799999999999999 9999999999999998643311 0 00 01111111111 113 3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhh----------hccCCccccccchhhHHHHHHHhhC
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEK----------LQINGFGITGCSRAMLANRVSYWLG 182 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~a~~is~~~~ 182 (883)
|+...++.+||+|||++++ ..|+||++|++.+.......... ...++..+...++|.+++++++.||
T Consensus 58 ~~~~~a~~~Al~dagl~~~---~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~ 134 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPP---LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIG 134 (381)
T ss_pred HHHHHHHHHHHHhcCCCCC---CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhC
Confidence 4566899999999999753 36899999998765432221100 1234455667888999999999999
Q ss_pred CCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceE
Q psy1120 183 VNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVC 262 (883)
Q Consensus 183 l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~ 262 (883)
++||+++++++|+||+.||..|++.|++|++|++||||+|..++|..+..|..++++++++ |||||.+++|+++|||++
T Consensus 135 ~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~-~rPfd~~r~G~v~gEGaa 213 (381)
T PRK05952 135 TQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTG-AYPFDRQREGLVLGEGGA 213 (381)
T ss_pred CCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCC-CCCCCCCCCCccccccEE
Confidence 9999999999999999999999999999999999999999989999999999999999864 999999999999999999
Q ss_pred EEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHH
Q psy1120 263 IMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEV 338 (883)
Q Consensus 263 ~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~ 338 (883)
++||+++++|+ +||++|+|++.++|+.+ .....|++.++.++|+++|+++|++|+||||||+|||||+.+|..|.
T Consensus 214 ~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~-~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~ 292 (381)
T PRK05952 214 ILVLESAELAQKRGAKIYGQILGFGLTCDAYH-MSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREA 292 (381)
T ss_pred EEEEeeHHHHHhCCCceEEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHH
Confidence 99999999986 49999999999999865 33445788899999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 339 QALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 339 ~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+||.++|+. .++|+|+|+++||+++|||++++++++++|++++|||++|+++|+++++
T Consensus 293 ~al~~~fg~----~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~ 350 (381)
T PRK05952 293 NLIQALFPH----RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLN 350 (381)
T ss_pred HHHHHHcCC----CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 999999963 5899999999999999999999999999999999999999999877665
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-53 Score=462.52 Aligned_cols=287 Identities=23% Similarity=0.331 Sum_probs=260.9
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHh
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYW 180 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~ 180 (883)
||+.+++++.++++||+|||+. .+..|+||++|++.++..... ......++++.++..+.|+++++|++.
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~---~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 77 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT---EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIK 77 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC---CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHH
Confidence 6789999999999999999986 456789999999887653321 122345678889999999999999999
Q ss_pred hCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC------CCCCCCCcccCCCC
Q psy1120 181 LGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFDEAANG 254 (883)
Q Consensus 181 ~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls------~~g~~~pfd~~~~G 254 (883)
|||+||+++|+++|+||+.||..|+++|++|+||++||||+|..++|..+..|..+++|+ |++.|||||.+++|
T Consensus 78 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G 157 (342)
T PRK14691 78 HHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDG 157 (342)
T ss_pred hCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999887 56799999999999
Q ss_pred cccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC
Q psy1120 255 YCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330 (883)
Q Consensus 255 ~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt 330 (883)
|++|||++++||+++++|+ ++|++|+|++.++|+.+.. ...|++.++.++|++||+++|++|+||||||+|||||
T Consensus 158 ~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~-~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT 236 (342)
T PRK14691 158 FVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMT-SGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATST 236 (342)
T ss_pred ccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCC-CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCC
Confidence 9999999999999999986 4999999999999986532 3457899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 331 ~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+.+|++|+.||.++|+. ..+++|+|+|+++||+++|||++++++++++|++++|||++|+++|||.++
T Consensus 237 ~~~D~~E~~Ai~~~fg~--~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~ 304 (342)
T PRK14691 237 PVGDLGEINAIKHLFGE--SNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAK 304 (342)
T ss_pred cCCCHHHHHHHHHHhCC--CCCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCcccc
Confidence 99999999999999975 246899999999999999999999999999999999999999999999774
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-52 Score=474.19 Aligned_cols=353 Identities=20% Similarity=0.282 Sum_probs=290.8
Q ss_pred CCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCC-CccccccCCCCCcccCCCChhhhhcCC
Q psy1120 31 PGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQ-RTGKLYEVNKFDAAFFGVHFKQAHTMD 109 (883)
Q Consensus 31 ~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~fD~~~f~i~~~~~~~~d 109 (883)
.+.+|+|||||+++|.|.+.++||++|++|++++++.+ +|+... .+. ..|.+ + |+. +.....++
T Consensus 9 ~~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~-~~~~~~----~~~~~~g~~---~-~~~------~~~~~~~~ 73 (425)
T PRK06501 9 GRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTIT-RFPTEG----LRTRIAGTV---D-FLP------ESPFGASA 73 (425)
T ss_pred CCcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCC-cccccC----CCCceEEEE---e-ecc------cccccccC
Confidence 34679999999999999999999999999999998753 343221 111 22222 1 221 11223467
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCC--------------CCceEEEEccCCCchh---hhhhhhhhccCCccccccchhh
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLR--------------GSKTGVFIGACFSESE---KTWFYEKLQINGFGITGCSRAM 172 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~--------------~~~~gv~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 172 (883)
+.+++.+.++++||+|||++..++. ..++|++.+....... ...........+..+.....+.
T Consensus 74 ~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (425)
T PRK06501 74 LSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGS 153 (425)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccH
Confidence 8899999999999999999643321 3578888876544322 1111111111122344556677
Q ss_pred HHHHHHHhhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----CCCCCCC
Q psy1120 173 LANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKS 247 (883)
Q Consensus 173 ~a~~is~~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----~~g~~~p 247 (883)
++++|++.||++||+++|+++|+|++.||++|+++|++|++|++||||+|..+++..+..|..++.++ +++.|||
T Consensus 154 ~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rp 233 (425)
T PRK06501 154 IADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKP 233 (425)
T ss_pred HHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCC
Confidence 89999999999999999999999999999999999999999999999999889999999999988887 5678999
Q ss_pred cccCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy1120 248 FDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWI 323 (883)
Q Consensus 248 fd~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~v 323 (883)
||.+++|+++|||++++||+++++|+ +||++|.|++.++|+.+. ....|++..+.++|+++|+++|++|+|||||
T Consensus 234 fd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~-~~~~~~~~~~~~ai~~AL~~agi~p~dId~i 312 (425)
T PRK06501 234 FSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHR-TRSSPDGSPAIGAIRAALADAGLTPEQIDYI 312 (425)
T ss_pred CCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCC-CCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999885 499999999999998653 3455788899999999999999999999999
Q ss_pred EEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 324 EAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 324 e~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
++|||||+.+|..|..+|.++|+. +...++|++.|+++||+.+|||++++++++++|++++|||++|+++|+|.++
T Consensus 313 ~~Hgtgt~~~d~~E~~al~~~~~~-~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~ 388 (425)
T PRK06501 313 NAHGTSTPENDKMEYLGLSAVFGE-RLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIP 388 (425)
T ss_pred EecCccCcchHHHHHHHHHHHhcc-cCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCC
Confidence 999999999999999999999973 3356899999999999999999999999999999999999999999999987
|
|
| >TIGR02816 pfaB_fam PfaB family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-52 Score=475.59 Aligned_cols=310 Identities=17% Similarity=0.219 Sum_probs=251.3
Q ss_pred CCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhcc-----CCCccchhhhhHHHHHHH--HH
Q psy1120 459 TRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITD-----TNPKMFDNILNSFVGIAA--IQ 530 (883)
Q Consensus 459 ~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~-----~~~~~l~~~~~~qp~i~a--~q 530 (883)
.++++|||||||+||+||||+||+ +|+||+.+++|. +|.+.++. .+.....++.+.||++|+ +|
T Consensus 180 ~~~vaFvFpGqGsqy~gMGr~L~~~~P~fr~~ld~~~--------~L~~~L~~~~~~~~~~~~~~~~~l~q~alfav~~~ 251 (538)
T TIGR02816 180 KAGLAFVYPGVGTVYADMFNDFHQYFPALFAKLEREG--------DLKAMLQAEDIYGEDPKHAAEMSLGDLAIAGVGSS 251 (538)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhhCHHHHHHHHhcC--------CHHHHhccccccccchhhhhhhhhHhHHHHHHHHH
Confidence 568999999999999999999997 899999999874 34444432 122234566788999995 59
Q ss_pred HHHHHHH-HHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccccc------------------ccccEE
Q psy1120 531 IGLVDIL-RALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEF------------------IRGAMA 591 (883)
Q Consensus 531 ial~~ll-~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~------------------~~G~M~ 591 (883)
++|+++| ++|||+|++++|||+|||+|+|+||+|+++|++.++..|+++|....+ ..+.|+
T Consensus 252 ~aLa~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvls~~dal~~v~~rs~L~~~~~rG~mmavr~a~~~~~~~~~~~~~~a 331 (538)
T TIGR02816 252 YLLTQLLCDEFAIKPDFALGYSKGEASMWASLGVWKNPHALIEKTQTDPIFTSAISGKLTAVREAWQLDDTAAEIQWNSF 331 (538)
T ss_pred HHHHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCCCcHHHHHHHHHhhHHhccccChhhhhhhhhhccccccccccccce
Confidence 9999999 589999999999999999999999999999999999998888864321 123455
Q ss_pred EEcCCHHHHhhcCCC--CeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCc-----cccchhhcccCCC
Q psy1120 592 AVGLGYKDLRSRCPP--EIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTE-----KHAPLKQCRAQRP 664 (883)
Q Consensus 592 av~~~~~~v~~~l~~--~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~a-----fHs~~m~~~~~~~ 664 (883)
+|+++.++++++|.+ +|+||++|+ .+|||||+.++|+++.+.|+++|+++++|.+ .++ |||++| +
T Consensus 332 vV~a~~~~V~~~L~~~~~V~IAaiN~-~q~VISG~~~Ai~~l~~~L~~~Gi~~r~L~a-~HA~pam~~HS~~m---e--- 403 (538)
T TIGR02816 332 VVRCEAAPIEALLKDFPHAYLAIIQG-DTCVIAGCEAQCKALLAALGKRGIAANRVTA-MHTQPALQEHQNVM---D--- 403 (538)
T ss_pred eecCCHHHHHHHhccCCCeEEEEeCC-CCeEeeCCHHHHHHHHHHHHhCCeeeeeccc-cccCcccccccHHH---H---
Confidence 678999999999974 599999998 7999999999999999999999999999998 666 788888 6
Q ss_pred CCCcchHHHHHHHHhhhccccccCCCCCCcceEeccc--CCccccc-cccccCCHHHHHHHhcCCccHHHHHHHhhcCC-
Q psy1120 665 PAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSN--TEANWTT-HLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA- 740 (883)
Q Consensus 665 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S~~~--~~~~~~~-~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~- 740 (883)
.+.+.+. .. -+|.+|++|+++ +...... ..+....++||.+|+|+||+|.+++++|.+++
T Consensus 404 -------~~l~~f~-----~~----l~p~ip~iSnvt~tG~~~~~~~~~d~~~ia~yw~~ql~~PVrF~~~I~~L~~~Gv 467 (538)
T TIGR02816 404 -------FYLQPLC-----AE----LPMDIKFISAADLLAKNQNSEQAIDSQSIANSIADTFCQTLDFTALIHHAQEQGA 467 (538)
T ss_pred -------HHHHHHH-----hh----cccCCeeeecccccCcccCCCcCCCHHHHHHHHHHcCCCccCHHHHHHHHHHCCC
Confidence 4444443 11 146899999984 3211000 01111247899999999999999999999875
Q ss_pred -EEEEECCCccchHHHHhhcCCC---------ccEEeeccCCCcchHHHHHHHHHHHHHcCCCCCCCCcCC
Q psy1120 741 -ITLEIAPHGLLQAILRRSLPKT---------VTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLYP 801 (883)
Q Consensus 741 -~~iEiGP~~~L~~~i~~~l~~~---------~~~~~~~~~~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~ 801 (883)
+|||||||++|+++++++++.. ...+++++|+ .++..++++++++||++|++|||..+++
T Consensus 468 ~~FVEIGPg~vLs~lv~~~l~~~~~~~~~~~~~~~l~sl~r~-~~d~~~ll~aLA~L~~~Gv~vdW~~l~~ 537 (538)
T TIGR02816 468 KLFVEIGADRQNCTLIDKINKQDGASSEQHQPCCTVAANAKG-GEDITSLIKAIAQLISHQIPLSLQPFID 537 (538)
T ss_pred CEEEEeCCChHHHHHHHHHhhcccccccccccceEeccCCCC-CchHHHHHHHHHHHHHCCCCCCchhcCC
Confidence 7999999999999999988532 2456666665 4679999999999999999999999875
|
The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-50 Score=457.09 Aligned_cols=344 Identities=22% Similarity=0.317 Sum_probs=285.8
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCC-CcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKV-DLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
++|+|||+|+++|.|.+.++||++|++|+ ++|++.+. |... .+...|. +.+||. . .++.+..+.|++.
T Consensus 2 ~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~-~~~~-----~~~~~g~---~~~~~~-~-~~~~~~~~~~~~~ 70 (392)
T PRK09185 2 TPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDF-WLVD-----LPTWVGE---VVGVEL-P-ALPAALAAFDCRN 70 (392)
T ss_pred CcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcc-cccc-----CCeEEEE---ecCccc-c-cCCHHHHhcCCHH
Confidence 47999999999999999999999999999 99987542 2211 1222233 334553 2 2677778889998
Q ss_pred HHHHHHHHHH---HHHHCCCCCCCCCCCceEEEEccCCCchhhhhh--hh-----hhccCCccccccchhhHHHHHHHhh
Q psy1120 112 CRIILEKTYE---AVIDAGINPKSLRGSKTGVFIGACFSESEKTWF--YE-----KLQINGFGITGCSRAMLANRVSYWL 181 (883)
Q Consensus 112 ~rl~l~aa~e---ALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~a~~is~~~ 181 (883)
.+++..++.+ |++|++ .+.+..|+||++|++.+....... .. .....++.++....+..+++|++.|
T Consensus 71 ~~~~~~a~~~~~~a~~~~~---~~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 147 (392)
T PRK09185 71 NRLALLALQQIEPAVEAAI---ARYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYL 147 (392)
T ss_pred HHHHHHHHHHHHHHHHhhc---ccCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHh
Confidence 8887777666 566655 234567899999998765433221 10 1112345566677889999999999
Q ss_pred CCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccce
Q psy1120 182 GVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAV 261 (883)
Q Consensus 182 ~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa 261 (883)
|++||+++++++|+|++.||+.|+++|++|+||.|||||++. .++.....|..++.++. +.|+|||.+++|+++|||+
T Consensus 148 gl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~-~~~~Pfd~~~~G~~~gEGa 225 (392)
T PRK09185 148 GLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP-QPCRPFSANRDGINIGEAA 225 (392)
T ss_pred CCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccCC-CccCCCcCCCCccceeceE
Confidence 999999999999999999999999999999999999999997 56666778888888875 6899999999999999999
Q ss_pred EEEEEcccccccceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHH
Q psy1120 262 CIMYLQKSKDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQAL 341 (883)
Q Consensus 262 ~~vvL~~~~~A~~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai 341 (883)
+++||++++ ...++|.|++.++|+.+ .....|++.++.++++++|++||++|+|||||++|||||+.+|..|..||
T Consensus 226 a~vVLe~~~---~~~~~I~g~g~~~d~~~-~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al 301 (392)
T PRK09185 226 AFFLLERED---DAAVALLGVGESSDAHH-MSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAV 301 (392)
T ss_pred EEEEEEEcC---CCcEEEEEEEEeCCCCC-CCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHH
Confidence 999999983 23467999999999875 33456788899999999999999999999999999999999999999999
Q ss_pred HHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 342 ENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 342 ~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
.++|+. .++|+|+|+++||+++|||++++++++++|+++++||++|+++|||.++
T Consensus 302 ~~~f~~----~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~ 356 (392)
T PRK09185 302 AAVFGD----GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALP 356 (392)
T ss_pred HHHhCC----CCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 999964 3579999999999999999999999999999999999999999999887
|
|
| >TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-50 Score=436.35 Aligned_cols=276 Identities=24% Similarity=0.346 Sum_probs=245.3
Q ss_pred CEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy1120 461 PLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRA 539 (883)
Q Consensus 461 ~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~ 539 (883)
+++|+|||||+||+||+++||+ +|.||+.+++|++++ |+++.+++++.+.+.++++.++||+||++|++++++|++
T Consensus 2 ~~~~~f~Gqg~~~~~m~~~l~~~~p~~~~~~~~~~~~l---g~~~~~~~~~~~~~~~~~~~~~q~~i~~~~~al~~~l~~ 78 (290)
T TIGR00128 2 KIAYVFPGQGSQTVGMGKDLYEQYPIAKELFDQASEAL---GYDLKKLCQEGPAEELNKTQYTQPALYVVSAILYLKLKE 78 (290)
T ss_pred CEEEEECCCCcchhhhHHHHHHcCHHHHHHHHHHHHHh---CcCHHHHHhCCCHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 5899999999999999999996 899999999999998 999999998665556788999999999999999999999
Q ss_pred cC-CCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCCC----CeEEee
Q psy1120 540 LN-ITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCPP----EIEVAC 612 (883)
Q Consensus 540 ~G-i~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~~----~v~iA~ 612 (883)
+| ++|++++|||+|||+|+|+||++|+||++++++.||++|++. ....|.|++| +.+.+++++.+.+ .+.|++
T Consensus 79 ~g~i~p~~v~GhS~GE~aAa~~aG~ls~eda~~lv~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~v~ia~ 158 (290)
T TIGR00128 79 QGGLKPDFAAGHSLGEYSALVAAGALDFETALKLVKKRGELMQEAVPEGGGAMAAVIGLDEEQLAQACEEATENDVDLAN 158 (290)
T ss_pred cCCCCCCEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEeCCCHHHHHHHHHhcCCCcEEEEE
Confidence 99 999999999999999999999999999999999999999875 2346899998 8999999888752 499999
Q ss_pred ecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCC
Q psy1120 613 HNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKP 691 (883)
Q Consensus 613 ~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 691 (883)
+|+|+++||||+++.|+++.+.|++.++ +++.|++ .+||||++| + ++.+ ++.+.+. .+. ..+
T Consensus 159 ~nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v-~~~fHs~~l---~--~~~~----~~~~~l~-----~~~--~~~ 221 (290)
T TIGR00128 159 FNSPGQVVISGTKDGVEAAAALFKEMGAKRAVPLEV-SGAFHSRFM---K--PAAE----KFAETLE-----ACQ--FND 221 (290)
T ss_pred ECCCCCEEEECCHHHHHHHHHHHHHcCCCeEEEcCC-CCCcccHHH---H--HHHH----HHHHHHH-----cCC--CCC
Confidence 9999999999999999999999999886 6889999 999999999 6 5555 6776666 333 457
Q ss_pred CCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC--CEEEEECCCccchHHHHhhcC
Q psy1120 692 RSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN--AITLEIAPHGLLQAILRRSLP 760 (883)
Q Consensus 692 ~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~--~~~iEiGP~~~L~~~i~~~l~ 760 (883)
|++|++|++++..... .....+||.+|+++||+|.++++.+.+. .+|||+||+++|+++++++++
T Consensus 222 p~ipi~S~~~g~~~~~----~~~~~~~~~~~l~~pV~f~~~i~~l~~~g~~~~ie~gp~~~l~~~~~~~~~ 288 (290)
T TIGR00128 222 PTVPVISNVDAKPYTN----GDRIKEKLSEQLTSPVRWTDSVEKLMARGVTEFAEVGPGKVLTGLIKRIKN 288 (290)
T ss_pred CCccEEECCCCCccCC----HHHHHHHHHHHccCCccHHHHHHHHHHCCCCEEEEECCchHHHHHHHHhcC
Confidence 8999999999876421 1235789999999999999999999876 479999999999999999864
|
The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension. |
| >TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=434.47 Aligned_cols=273 Identities=21% Similarity=0.306 Sum_probs=241.0
Q ss_pred EEEEeCCCCchhhHhhHHHhcChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHHcC
Q psy1120 462 LWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALN 541 (883)
Q Consensus 462 v~fvF~GQGsq~~gMg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~~G 541 (883)
++|+|||||+||+|||++|+++|.||+.+++|++++ ++++.++ . +.+.+.++.++||++|++|++++++|+++|
T Consensus 1 ~~~~F~GqG~q~~~m~~~l~~~p~~~~~~~~~~~~l---~~~~~~~-~--~~~~l~~~~~~qp~i~~~q~al~~~l~~~g 74 (295)
T TIGR03131 1 IALLFPGQGSQRAGMLAELPDHPAVAAVLAEASDVL---GIDPREL-D--DAEALASTRSAQLCILAAGVAAWRALLALL 74 (295)
T ss_pred CEEEECCcchhhhhHHHHHHhCHHHHHHHHHHHHHh---CcCHHHc-C--CHhhhccchhhhHHHHHHHHHHHHHHHhcC
Confidence 589999999999999999977899999999999998 8888873 2 234578889999999999999999999999
Q ss_pred CCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEE-cCCHHHHhhcCCC-CeEEeeecCCCcE
Q psy1120 542 ITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAV-GLGYKDLRSRCPP-EIEVACHNSPDSS 619 (883)
Q Consensus 542 i~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av-~~~~~~v~~~l~~-~v~iA~~Nsp~~~ 619 (883)
++|++++|||+|||+|+|++|++|++|++++++.|+++|++.....++|++| +++.+++++++.+ +++||++|+|+++
T Consensus 75 ~~P~~v~GhS~GE~aAa~~aG~~s~e~a~~lv~~r~~~~~~~~~~~~~m~av~~~~~~~~~~~l~~~~v~ia~~Nsp~~~ 154 (295)
T TIGR03131 75 PRPSAVAGYSVGEYAAAVVAGVLTFDDALRLVALRAALMDQAVPGGYGMLAVLGLDLAAVEALIAKHGVYLAIINAPDQV 154 (295)
T ss_pred CCCcEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCHHHHHHHHHHcCEEEEEEcCCCCE
Confidence 9999999999999999999999999999999999999997654445678777 8999999998864 5999999999999
Q ss_pred EEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEe
Q psy1120 620 TISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLS 698 (883)
Q Consensus 620 visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S 698 (883)
||||++++++++.+.++++|+ ++++|++ .+||||++| + ++.+ ++.+.+. .+. .+.|.+|++|
T Consensus 155 visG~~~~l~~l~~~l~~~g~~~~~~l~v-~~afHs~~~---~--~~~~----~~~~~l~-----~~~--~~~~~ip~~S 217 (295)
T TIGR03131 155 VIAGSRAALRAVAELARAAGASRAKRLAV-RVPSHTPLL---A--KAAE----QFAEALA-----EIP--LAAPRLPYLS 217 (295)
T ss_pred EEECCHHHHHHHHHHHHhcCCceEEECCC-CCCcccHHH---H--HHHH----HHHHHHh-----cCC--CCCCCceEEE
Confidence 999999999999999999998 9999999 999999999 7 6655 7777666 433 3578999999
Q ss_pred cccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC--CEEEEECCCccchHHHHhhcCC
Q psy1120 699 TSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN--AITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~--~~~iEiGP~~~L~~~i~~~l~~ 761 (883)
++++..... .....+||.+|+++||+|.++++.+.+. .+|||+||+++|+++++++++.
T Consensus 218 ~~~g~~~~~----~~~~~~~~~~~l~~pV~~~~~i~~l~~~g~~~~veiGp~~~l~~~~~~~~~~ 278 (295)
T TIGR03131 218 GIDARLVRD----AAQIRDDLARQIATPVDWHDCMQAAYERGARLVIELGPGDVLTKLANEAFPE 278 (295)
T ss_pred CCCCeecCC----HHHHHHHHHHHhcCCCcHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHhcCC
Confidence 999876421 1125799999999999999999999876 4799999999999999998753
|
Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group. |
| >PLN02752 [acyl-carrier protein] S-malonyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-49 Score=439.58 Aligned_cols=280 Identities=21% Similarity=0.301 Sum_probs=246.4
Q ss_pred CCCCCEEEEeCCCCchhhHhhHHHhcChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHH
Q psy1120 457 GDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDI 536 (883)
Q Consensus 457 ~~~~~v~fvF~GQGsq~~gMg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~l 536 (883)
..+++++|+|||||+||+|||+++.++|.||+.+++|++++ |+++.++++..+.+.++++.++||+||++||+++++
T Consensus 35 ~~~~~~a~lFpGQGsq~~gm~~~~~~~p~~~~~~~~~~~~l---g~~l~~~~~~~~~~~l~~~~~~qp~i~~~~~a~~~~ 111 (343)
T PLN02752 35 DYKPTTAFLFPGQGAQAVGMGKEAAEVPAAKALFDKASEIL---GYDLLDVCVNGPKEKLDSTVVSQPAIYVASLAAVEK 111 (343)
T ss_pred CCCCCEEEEECCCCcchhhHHHHHHhCHHHHHHHHHHHHHh---CCCHHHHHhcCCHHHHhcchhhhHHHHHHHHHHHHH
Confidence 46678999999999999999999445899999999999988 999999998766666889999999999999999999
Q ss_pred HHHcCCCc------cEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC---
Q psy1120 537 LRALNITP------DHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP--- 605 (883)
Q Consensus 537 l~~~Gi~P------~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~--- 605 (883)
|+++|++| ++++|||+|||+|+|+||++++++++++++.|+++|++. ....|.|++| +++.+++++++.
T Consensus 112 l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ls~e~al~lv~~R~~~m~~~~~~~~g~m~av~g~~~~~~~~~l~~~~ 191 (343)
T PLN02752 112 LRARDGGQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSVIGLDSDKVQELCAAAN 191 (343)
T ss_pred HHhcCCCcccccCCCeeeeccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhccCCCccEEEEeCCCHHHHHHHHHHhh
Confidence 99999755 678999999999999999999999999999999999765 3457889987 999999988873
Q ss_pred ------CCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCC-CeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHH
Q psy1120 606 ------PEIEVACHNSPDSSTISGPEENVKKFVAELQADN-IFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMK 678 (883)
Q Consensus 606 ------~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~g-i~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~ 678 (883)
..++|||+|+|+++||||++++|+++.+.+++.+ +++++|+| ++|||||+| + ++.+ .+.+.+.
T Consensus 192 ~~~~~~~~v~IA~~Nsp~~~vIsG~~~~l~~l~~~l~~~~~~~~~~L~v-~~pfHsp~m---~--~~~~----~l~~~l~ 261 (343)
T PLN02752 192 EEVGEDDVVQIANYLCPGNYAVSGGKKGIDAVEAKAKSFKARMTVRLAV-AGAFHTSFM---E--PAVD----ALEAALA 261 (343)
T ss_pred hccCCCCeEEEEEEcCCCCEEEECcHHHHHHHHHHHHhcCCceEEECCC-CCCcchHHH---H--HHHH----HHHHHHh
Confidence 2599999999999999999999999999998765 68899999 999999999 7 6666 7777776
Q ss_pred hhhccccccCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHH
Q psy1120 679 ARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILR 756 (883)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~ 756 (883)
.+. .++|++|++|++++..... ....++||.+|+++||+|.++++.+.+.+ .|||+||+++|+++++
T Consensus 262 -----~~~--~~~p~ipviS~~tg~~~~~----~~~~~~~l~~~l~~PV~~~~~i~~l~~~g~~~~iEiGP~~~L~~l~~ 330 (343)
T PLN02752 262 -----AVE--IRTPRIPVISNVDAQPHSD----PATIKKILARQVTSPVQWETTVKTLLEKGLEKSYELGPGKVIAGIVK 330 (343)
T ss_pred -----cCC--CCCCCceEEEcCCCCccCC----hHHHHHHHHHHCcCCEEHHHHHHHHHHCCCCEEEEeCCcHHHHHHHH
Confidence 433 4678999999999887532 22368999999999999999999999875 6899999999999999
Q ss_pred hhcC
Q psy1120 757 RSLP 760 (883)
Q Consensus 757 ~~l~ 760 (883)
++.+
T Consensus 331 ~~~~ 334 (343)
T PLN02752 331 RVDK 334 (343)
T ss_pred HhhC
Confidence 9864
|
|
| >smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-49 Score=430.71 Aligned_cols=275 Identities=31% Similarity=0.527 Sum_probs=246.1
Q ss_pred eCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccC-CCChHHHhccCCC--ccchhhhhHHHHHHHHHHHHHHHHHHcC
Q psy1120 466 FSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPK-GVDVKRIITDTNP--KMFDNILNSFVGIAAIQIGLVDILRALN 541 (883)
Q Consensus 466 F~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~-g~~l~~~l~~~~~--~~l~~~~~~qp~i~a~qial~~ll~~~G 541 (883)
|||||+||+|||++||+ +|.||+.+++|++++++. |+++.+++...++ ..++++.++||+||++|++++++|+++|
T Consensus 1 F~GQG~q~~~m~~~l~~~~~~~~~~~~~~~~~l~~~~g~~~~~~l~~~~~~~~~l~~~~~~q~~i~~~~~a~~~~l~~~G 80 (298)
T smart00827 1 FTGQGSQWPGMGRELYETEPVFRAALDECDAALQPLLGWSLLDVLFGEDGAASLLRRTEVAQPALFAVQVALARLWRSWG 80 (298)
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHHHHHHHHHHhcCCCHHHHHcCCCCchhhhcccchhHHHHHHHHHHHHHHHHHcC
Confidence 89999999999999996 899999999999999876 9999999976543 3478899999999999999999999999
Q ss_pred CCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEEcCCHHHHhhcCCC---CeEEeeecCCCc
Q psy1120 542 ITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPP---EIEVACHNSPDS 618 (883)
Q Consensus 542 i~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av~~~~~~v~~~l~~---~v~iA~~Nsp~~ 618 (883)
++|++++|||+|||+|+|++|++|++|++++++.|+++|++. ...|+|++|+.+.+++++.+.. .++|||+|+|++
T Consensus 81 i~p~~~~GhSlGE~aA~~~ag~~~~~~~l~l~~~r~~~~~~~-~~~g~m~av~~~~~~~~~~l~~~~~~~~ia~~ns~~~ 159 (298)
T smart00827 81 VRPDAVVGHSLGEIAAAYVAGVLSLEDAARLVAARGRLMQAL-PGGGAMLAVGLSEEEVEELLAGYGGRVSVAAVNGPSS 159 (298)
T ss_pred CcccEEEecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhc-CCCCeEEEEeCCHHHHHHHHHhcCCcEEEEEEcCCCC
Confidence 999999999999999999999999999999999999999875 3478999999999999998863 699999999999
Q ss_pred EEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEe
Q psy1120 619 STISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLS 698 (883)
Q Consensus 619 ~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S 698 (883)
+||||+++.++++.+.++++++++++|++ .+||||++| + ++.+ .+++.+. .+. ..++++|++|
T Consensus 160 ~visG~~~~l~~l~~~l~~~~~~~~~L~v-~~~fHs~~~---~--~~~~----~~~~~l~-----~~~--~~~~~~pv~S 222 (298)
T smart00827 160 VVLSGDEDAVDELAAALEARGIRARRLKV-DHAFHSPHM---D--PILD----EFREALA-----GIT--PRPPRIPFVS 222 (298)
T ss_pred EEEECCHHHHHHHHHHHHHCCceEEECCC-CCCCchHHH---H--HHHH----HHHHHHh-----hCC--CCCCCCcEEe
Confidence 99999999999999999999999999999 999999999 7 6655 7777766 333 3578999999
Q ss_pred cccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhc-C--CEEEEECCCccchHHHHhhcCC
Q psy1120 699 TSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQK-N--AITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~-~--~~~iEiGP~~~L~~~i~~~l~~ 761 (883)
+++++.... ....+++||.+|+++||+|.++++.+.+ . .+|||+||+++|+++++++++.
T Consensus 223 ~~~g~~~~~---~~~~~~~~l~~~l~~pV~~~~~i~~l~~~~g~~~~ie~Gp~~~l~~~~~~~~~~ 285 (298)
T smart00827 223 TVTGELIDG---AELDDAEYWVRNLREPVRFADAVRALLAEQGVTVFLEVGPHPVLTGPIKQTLPA 285 (298)
T ss_pred CCCCcccCC---CCCCCHHHHHHHhhccEeHHHHHHHHHHcCCCcEEEEeCCcHHHHHHHHHHHhc
Confidence 999876532 2334589999999999999999999995 3 4799999999999999999864
|
|
| >COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=424.55 Aligned_cols=278 Identities=26% Similarity=0.371 Sum_probs=250.6
Q ss_pred CCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy1120 460 RPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILR 538 (883)
Q Consensus 460 ~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~ 538 (883)
.+++|+|||||+||.|||++||+ ++.+++.++++++.+ ++++.+++++.+++.++.|.++||+|++++++.++.|+
T Consensus 2 ~~~A~~FpGQGsQ~~gMg~~l~~~~~~a~~~~~~a~~~l---~~~l~~i~~~~p~~~L~~T~~tQPal~~~s~a~~~~l~ 78 (310)
T COG0331 2 SKTAFVFPGQGSQSLGMGKDLYENSPEAKETFDEADEAL---GFDLWALVFEGPEEELNLTQNTQPALLLVSLAAYRVLA 78 (310)
T ss_pred CcceEEeCCchHHHHHhHHHHHhccHHHHHHHHHHHHHh---cccHHHHhcCCCHHHhcccchhhHHHHHHHHHHHHHHH
Confidence 46899999999999999999997 789999999999999 89999999988888899999999999999999999999
Q ss_pred HcC--CCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCCC-----CeE
Q psy1120 539 ALN--ITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCPP-----EIE 609 (883)
Q Consensus 539 ~~G--i~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~~-----~v~ 609 (883)
+.| ++|++++|||+|||+|++++|+++++|+++++..||.+|++. ..+.|+|.+| |++.++++++|.+ .|+
T Consensus 79 ~~~~~~~p~~~aGHSlGEysAl~~ag~~~~ed~~~Lv~~RG~~M~~a~p~~~g~Maav~gl~~e~v~~~~~~~~~~~~v~ 158 (310)
T COG0331 79 EQGLGVKPDFVAGHSLGEYSALAAAGVLSFEDALKLVRKRGKLMQEAVPRGEGGMAAVLGLDDEQVEKACEEAAQGTVVE 158 (310)
T ss_pred HhcCCCCCceeecccHhHHHHHHHcccccHHHHHHHHHHHHHHHHHHccCCCccHHHHcCCCHHHHHHHHHHhccCCeEE
Confidence 865 999999999999999999999999999999999999999987 3456999999 9999999999862 399
Q ss_pred EeeecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccC
Q psy1120 610 VACHNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQ 688 (883)
Q Consensus 610 iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 688 (883)
||++|+|.|+||||..++|+++...+++.|. +...|+| +.||||++| . |+.+ ++...+. . ..
T Consensus 159 iaN~N~~~QiVIsG~~~ale~a~~~~~~~g~kr~i~l~v-s~pfHs~lm---~--pa~~----~~~~~l~-----~--~~ 221 (310)
T COG0331 159 IANYNSPGQIVISGTKEALEKAAEILKEAGAKRAIPLPV-SGPFHSPLM---K--PAAD----ELAEALE-----K--VR 221 (310)
T ss_pred EeeeCCCCcEEEECCHHHHHHHHHHHHHhhhhhhcccCC-Cchhhhhhh---H--HHHH----HHHHHHH-----h--cC
Confidence 9999999999999999999999999999984 5777999 999999999 7 8877 8887777 3 34
Q ss_pred CCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcCC
Q psy1120 689 PKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 689 ~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~~ 761 (883)
..++.+|+++++++....+ .....+.+.+|+.+||||.++++.+.+.| .|+|+||+++|+++++++.+.
T Consensus 222 ~~~~~ipvi~n~~~~~~~~----~~~i~~~L~~q~~~pVrW~etv~~l~~~gv~~~~EiGpg~vL~gL~kri~~~ 292 (310)
T COG0331 222 FSDPLVPVISNVDAKPVLD----GEEIRELLAKQLTSPVRWTETVETLKADGVTRFVEIGPGKVLTGLAKRILKG 292 (310)
T ss_pred CCCccceeeeccccccccC----HHHHHHHHHHHhcCCeeHHHHHHHHHhcCceEEEEeCCcHHHHHHHHhhcCC
Confidence 4788999999999876422 22367899999999999999999999875 589999999999999999753
|
|
| >KOG2926|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=340.46 Aligned_cols=277 Identities=23% Similarity=0.325 Sum_probs=243.6
Q ss_pred CCEEEEeCCCCchhhHhhHHHhcChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy1120 460 RPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRA 539 (883)
Q Consensus 460 ~~v~fvF~GQGsq~~gMg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~ 539 (883)
+-.+++|||||+||.|||+.++++|..|+.+++|++++ |++|.+++.+++.+.+++|.++||+|++.++|..+.|+.
T Consensus 62 e~s~iLFPGQG~q~vgm~q~~l~~p~a~~~~~~A~~vl---~YdLlki~~~gP~e~ldrT~~~QpAI~~~SlAa~E~l~~ 138 (386)
T KOG2926|consen 62 ETSVILFPGQGAQSVGMGQYLLQNPAARRLFAEASNVL---GYDLLKICVNGPKEKLDRTVIAQPAIDVSSLAALEQLRL 138 (386)
T ss_pred cceEEEeCCCChhhhhhhHHHHhCcchhHHHHHHHHHh---hHHHHHHHhcCccchhhcccccccceecccHHHHHhccc
Confidence 45799999999999999999999999999999999999 999999999988889999999999999999999999998
Q ss_pred cC---CC-ccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC--------
Q psy1120 540 LN---IT-PDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP-------- 605 (883)
Q Consensus 540 ~G---i~-P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~-------- 605 (883)
++ ++ -++..|||+|||+|++++|+|+++++++++..|+..|+++ ....++|..+ +.+..++...+.
T Consensus 139 ~~p~~ie~~~~~aGfSlGEy~alvfa~aLsFs~alKlVk~Ra~AMs~a~~~~~~~m~~~~~~p~sk~~~~~~~a~~~~~~ 218 (386)
T KOG2926|consen 139 LGPSIIENLVVTAGFSLGEYAALVFAGALSFSSALKLVKARAEAMSEASELVASGMVMILGLPTSKVQKACASANQLSAS 218 (386)
T ss_pred cCcchhheeeeeccccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccceeecCcHhHHHHHHhhhHHHhhh
Confidence 88 44 4667999999999999999999999999999999999876 3446677776 777677776653
Q ss_pred ---CCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhh
Q psy1120 606 ---PEIEVACHNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARD 681 (883)
Q Consensus 606 ---~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~ 681 (883)
+.++||+||+|+++||||..++|+-+.+..+..++ +.++|.| +.||||++| + |+.+ .+.+++.
T Consensus 219 qe~~~~~VANyl~~~~~VvsG~~~~Le~lee~~~sf~~~r~~~LaV-sgAFHTr~M---e--pAve----pl~~Al~--- 285 (386)
T KOG2926|consen 219 QEYPVCEVANYLSPGQRVVSGLVKALESLEENAKSFKIRRMKRLAV-SGAFHTRLM---E--PAVE----PLTKALK--- 285 (386)
T ss_pred ccCCeeeeeccCCCCcEEeeCcHHHHHHHHHHHHhhhhhhheeeee-ccccchhhh---h--hhHH----HHHHHHH---
Confidence 24899999999999999999999999987777776 7789999 999999999 8 9999 8888888
Q ss_pred ccccccCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC-----CEEEEECCCccchHHHH
Q psy1120 682 RAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN-----AITLEIAPHGLLQAILR 756 (883)
Q Consensus 682 ~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~-----~~~iEiGP~~~L~~~i~ 756 (883)
.+.. +.|.+|+||++++..+... .....-+.+|+.+||+|.++++++.+. ..++|+|||.+|.++++
T Consensus 286 --~vei--~~p~~pViSNvdg~~~~~~----~hi~~~l~kQ~~rPV~we~~~~ti~sk~~~g~~~sye~GPG~~l~~ilk 357 (386)
T KOG2926|consen 286 --AVEI--KNPVIPVISNVDGKPYRDP----GHILKQLAKQIVRPVQWEQTLKTIYSKQGVGFPRSYEVGPGRVLVAILK 357 (386)
T ss_pred --HHHh--cCCCcceeecCCCcccCCh----HHHHHHHHHHhcCchhHHHHHHHHHhcCCCCCCceEeeCCcHHHHHHHH
Confidence 4433 6779999999999887532 235678999999999999999999875 25899999999999999
Q ss_pred hhcC
Q psy1120 757 RSLP 760 (883)
Q Consensus 757 ~~l~ 760 (883)
+...
T Consensus 358 ~~~~ 361 (386)
T KOG2926|consen 358 RNNP 361 (386)
T ss_pred HhCc
Confidence 8753
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=347.51 Aligned_cols=239 Identities=33% Similarity=0.545 Sum_probs=191.8
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCc--------cccccCCCCCcccCCCChhh
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRT--------GKLYEVNKFDAAFFGVHFKQ 104 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~fD~~~f~i~~~~ 104 (883)
++|||||||+++|+|.+.++||++|.+|++++++.+.||....++....... ++++ ...||..+|++++++
T Consensus 2 ~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 80 (254)
T PF00109_consen 2 RRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPERWDPSDYYDPPSRVAGEIDDKKGGFID-DFDFDAYFFGIPPRE 80 (254)
T ss_dssp S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCSSSCHTTSTTSSCSEEECBSSSEESSST-TTCGGGTSTCHHHHH
T ss_pred CEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeeccccccccccccCCcccccccccccceee-ecccccccccccchh
Confidence 6899999999999999999999999999999997543777664321122222 2333 688999999999999
Q ss_pred hhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCc-eEEEEccCCCchhhhhhh---h--hhccCCccccccchhhHHHHHH
Q psy1120 105 AHTMDPMCRIILEKTYEAVIDAGINPKSLRGSK-TGVFIGACFSESEKTWFY---E--KLQINGFGITGCSRAMLANRVS 178 (883)
Q Consensus 105 ~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~-~gv~~g~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~a~~is 178 (883)
++.|||++++++.++++||+|||+.++.+++.+ +|||+|++.+++...... . .....++.+...++|.++++||
T Consensus 81 ~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia 160 (254)
T PF00109_consen 81 ARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIA 160 (254)
T ss_dssp HHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHH
T ss_pred hhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchh
Confidence 999999999999999999999999887777665 999999999865322111 1 1233342333458899999999
Q ss_pred HhhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccc
Q psy1120 179 YWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRS 258 (883)
Q Consensus 179 ~~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~g 258 (883)
+.||++||+++|+++|+||+.||+.|+++|++|+||+|||||+|..+++..+..|.+++++++++.|+|||.+++|+++|
T Consensus 161 ~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~g 240 (254)
T PF00109_consen 161 ILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLG 240 (254)
T ss_dssp HHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB
T ss_pred hhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999889999999999999999988999999999999999
Q ss_pred cceEEEEEcccccc
Q psy1120 259 EAVCIMYLQKSKDA 272 (883)
Q Consensus 259 EGa~~vvL~~~~~A 272 (883)
||++++||+++++|
T Consensus 241 EGa~~~vLe~~~~A 254 (254)
T PF00109_consen 241 EGAGALVLERLEHA 254 (254)
T ss_dssp -EEEEEEEEEHHHH
T ss_pred CceEEEEEEEhhhC
Confidence 99999999999875
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=324.11 Aligned_cols=313 Identities=14% Similarity=0.080 Sum_probs=237.4
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+|+|+|+++|.|.+.++.|.+++.|.+...... +..... ......+.+ +-.+.....++..
T Consensus 3 ~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~-~~~~~~-~~~i~~~~~--------------~~~~~~~~~~r~~ 66 (348)
T PRK06147 3 RALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETR-FIDPPG-GEWLIGAPV--------------PLPPPWRGPERLA 66 (348)
T ss_pred CceEEEecceeecCcCCHHHHHHHHHcccccccccc-cccCCC-CCceEeecC--------------cCCcccCchHHHH
Confidence 469999999999999999999999999987664321 111100 000011111 1111222344677
Q ss_pred HHHHHHHHHHHHHCC-CCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 113 RIILEKTYEAVIDAG-INPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 113 rl~l~aa~eALedAG-~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
+|+.+++.+||++++ ++++ +++++++....+.. ..+ .......++.++..+|+ ++|+++
T Consensus 67 ~La~~Al~~aL~~a~~~~~~-----~i~lil~~~~~~~~---------~~~----~~~~~~~~~~~~~~lG~~~~~~~~~ 128 (348)
T PRK06147 67 EMAAPAIAEALEGLPALDAS-----EAPLLLCVAEEERP---------GRP----PDLEERLLRELEARLGLRLEPGSAV 128 (348)
T ss_pred HHHHHHHHHHHHhccccccc-----CCcEEEEeCchhcC---------CCC----cchHHHHHHHHHHHhCCCCCCCccc
Confidence 899999999999998 4443 35677765331100 000 01112235667788887 578999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|.++|+|++.||..|++.|++|+||.+||||+|.++++..+..|...+.+..+ .+++|+++|||++++||+++
T Consensus 129 i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~-------~~~~G~v~GEGA~a~vLe~~ 201 (348)
T PRK06147 129 IARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTS-------QNSNGFIPGEAAAAVLLGRP 201 (348)
T ss_pred ccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCC-------CCCCceeeeceEEEEEEccH
Confidence 99999999999999999999999999999999998888777777776555431 36899999999999999999
Q ss_pred cccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhh
Q psy1120 270 KDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVF 345 (883)
Q Consensus 270 ~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f 345 (883)
++|+ +||+ .|++.+.++.+...-..+++.++.++|+++|+++|++|+|||||++|+|||+.+|..|..|+.++|
T Consensus 202 ~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f 279 (348)
T PRK06147 202 AGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLF 279 (348)
T ss_pred hhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHh
Confidence 9886 3666 566666665322111123789999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCC
Q psy1120 346 CPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPN 389 (883)
Q Consensus 346 ~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~ 389 (883)
+.. ....++.+.|+++||+.+|+|+++++.++++|+++++|+.
T Consensus 280 ~~~-~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~ 322 (348)
T PRK06147 280 RVR-KEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP 322 (348)
T ss_pred hhc-cCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 752 3456789999999999999999999999999999999865
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=320.21 Aligned_cols=284 Identities=24% Similarity=0.379 Sum_probs=249.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh--hhhhccCCccccccchhhHHHHHHHhhCCCCcee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF--YEKLQINGFGITGCSRAMLANRVSYWLGVNGPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~ 188 (883)
+++|+++++++||+|||++++.......+|++|++.+++..... .....+.++.+.+...+.++++|+..+|++||++
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~ 90 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAY 90 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCCcc
Confidence 78899999999999999996655566789999988776543221 2233566777888888899999999999999999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
+|+++|+|++.||++|+++|++|++|.+||+|+|....+.........+.+++++.|+|||...+|+++|||++++||++
T Consensus 91 ~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL~~ 170 (332)
T cd00825 91 DVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEE 170 (332)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEECc
Confidence 99999999999999999999999999999999999877766655666667788999999999999999999999999999
Q ss_pred ccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh
Q psy1120 269 SKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV 344 (883)
Q Consensus 269 ~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~ 344 (883)
.++|+ +++++|.+++...++.. .....+....+.++++++|+++|++++||||++.|++|++..|.+|.+++...
T Consensus 171 ~~~a~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~ 249 (332)
T cd00825 171 LEHALARGAHIYAEIVGTAATIDGAG-MGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSE 249 (332)
T ss_pred HHHHHHCCCeEEEEEEEEEEccCCCC-CCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHH
Confidence 88874 58999999999888753 23345778899999999999999999999999999999999999999999988
Q ss_pred hCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCC
Q psy1120 345 FCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKD 398 (883)
Q Consensus 345 f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~ 398 (883)
++. .++++.+.|.++||+.+|+|++.++++++.++++.+||++|+.++++.
T Consensus 250 ~~~---~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~ 300 (332)
T cd00825 250 FGD---KSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEA 300 (332)
T ss_pred hCC---CCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcc
Confidence 843 367899999999999999999999999999999999999999999883
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=231.68 Aligned_cols=219 Identities=25% Similarity=0.433 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC-CCceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV-NGPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l-~Gps~t 189 (883)
.+.|+.+++.+||+++|+++++++ ++++|+..+++. .+..+.+++..+|+ ++|+++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~----~li~~~~~~~~~-------------------~~~~a~~i~~~lg~~~~~~~~ 63 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV----GVIVGTTGGSGE-------------------FSGAAGQLAYHLGISGGPAYS 63 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce----EEEEEECCCCcc-------------------ccHHHHHHHHHhCCCCCCcce
Confidence 678999999999999999877665 699998765431 24567899999999 899999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+++|+|++.||++|++.|++|++|.+||+|+|. +++|||++++||++.
T Consensus 64 i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------~~~gdGAaa~vL~~~ 112 (254)
T cd00327 64 VNQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------FVFGDGAAAAVVESE 112 (254)
T ss_pred eccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------------eeecceEEEEEECcH
Confidence 9999999999999999999999999999999997 688999999999998
Q ss_pred cccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhh
Q psy1120 270 KDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVF 345 (883)
Q Consensus 270 ~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f 345 (883)
+++. +++++|.++....++... ...+......++++++|+++|++++|||++++|+++++..|..|..+....+
T Consensus 113 ~~a~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~ 190 (254)
T cd00327 113 EHALRRGAHPQAEIVSTAATFDGASM--VPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPD 190 (254)
T ss_pred HHHHHCCCceEEEEEEEEEcCCCCCC--CCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHh
Confidence 8764 588999999887776431 2356788899999999999999999999999999999999999988877665
Q ss_pred CCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCC
Q psy1120 346 CPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPP 388 (883)
Q Consensus 346 ~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp 388 (883)
. ..++++.+.|.++||+.+|+|...+.+++..++++.+||
T Consensus 191 ~---~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~ 230 (254)
T cd00327 191 G---VRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPP 230 (254)
T ss_pred C---CCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCC
Confidence 3 234788999999999999999999999999999999998
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-26 Score=213.63 Aligned_cols=118 Identities=43% Similarity=0.747 Sum_probs=99.5
Q ss_pred eEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCC-CCCee
Q psy1120 276 YARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGR-TTPLL 354 (883)
Q Consensus 276 ~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~-~~~~~ 354 (883)
||+|+|+++++||....+++.|++.++.++|+++|+++|++|+||||||+|||||+.+|..|+++|.++|+... ..+++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 79999999999995556788899999999999999999999999999999999999999999999999997643 46799
Q ss_pred ecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCC
Q psy1120 355 IGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFK 393 (883)
Q Consensus 355 igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~ 393 (883)
|+|+|+++||+++|||+++++|++++|++++|||++||+
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999985
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.3e-20 Score=208.96 Aligned_cols=249 Identities=17% Similarity=0.272 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~t 189 (883)
...|+.+++.+||+|||+++++++ +|++|+..++.... ....+..++..+|++ +|.++
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id----~vi~g~~~~~~~~~-----------------~~~~a~~va~~lGl~~~~~~~ 80 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDID----AMYVGNMSAGLFVS-----------------QEHIAALIADYAGLAPIPATR 80 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccccc-----------------cccHHHHHHHHcCCCCCCeeE
Confidence 467899999999999999988887 57777654332110 012466789999997 69999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh--H-----------------------HHH------HhcCC
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV--S-----------------------LQF------ARLGV 238 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~--~-----------------------~~~------~~~~~ 238 (883)
|+++|+|++.||..|++.|++|++|++||+|.+.+..... . +.+ .+.|.
T Consensus 81 v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~ 160 (389)
T PRK06064 81 VEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGT 160 (389)
T ss_pred EeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999986432100 0 000 00000
Q ss_pred -----------------CCCCCC----------------CCCcccCCCCcccccceEEEEEcccccccc---eeEEEEee
Q psy1120 239 -----------------LSPDGR----------------CKSFDEAANGYCRSEAVCIMYLQKSKDAKR---VYARVVHA 282 (883)
Q Consensus 239 -----------------ls~~g~----------------~~pfd~~~~G~~~gEGa~~vvL~~~~~A~~---i~a~I~g~ 282 (883)
..|... +.|+ ...|...++||++++||++.+.|++ .++.|+|+
T Consensus 161 s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl-~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v~I~g~ 239 (389)
T PRK06064 161 TEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPL-KLLDCSPITDGAAAVILASEEKAKEYTDTPVWIKAS 239 (389)
T ss_pred CHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCC-chhhcCCCCCcceEEEEecHHHHHHhcCCCeEEEEE
Confidence 000000 0111 1235557899999999999998863 56799999
Q ss_pred eeccCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCC----------CC--
Q psy1120 283 KTNCDGYKEQGI-TYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCP----------GR-- 349 (883)
Q Consensus 283 ~~~~dg~~~~~~-~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~----------~~-- 349 (883)
+..+++...... ..+...+...+++++|+++|++++||||+|.|+++|. .+.++++++. |+. +.
T Consensus 240 g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~-~~~~~~e~lg--l~~~G~~~~~~~~g~~~ 316 (389)
T PRK06064 240 GQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI-AEILAYEDLG--FAKKGEGGKLAREGQTY 316 (389)
T ss_pred EEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH-HHHHHHHHcC--CCCCCchHHHHHCCCcc
Confidence 988776432111 1123456778999999999999999999999999997 3444444443 221 10
Q ss_pred -CCCeeecccCCC--CCCCcccchhhHHHHHHHHhhcC
Q psy1120 350 -TTPLLIGSVKSN--IGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 350 -~~~~~igs~K~~--~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
...++|+...+. .||+.+|+|+..++.++.+|+.+
T Consensus 317 ~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~ 354 (389)
T PRK06064 317 IGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGE 354 (389)
T ss_pred CCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCC
Confidence 124567666665 69999999999999999999875
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=210.78 Aligned_cols=237 Identities=17% Similarity=0.183 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++.+||+|+|+++++++ .|++|+...... ..+ .+..++..+|+. .|+++
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID----~vi~g~~~~~~~------------------~~~-~a~~va~~lGl~~~~p~~~ 83 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVD----EVILGQVLTAGA------------------GQN-PARQAAIKAGLPHSVPAMT 83 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCCC------------------CCc-HHHHHHHHcCCCCCcceEE
Confidence 45899999999999999999888 488886542210 112 455688999996 49999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh----------------HHH-----H-Hh-cCC-C------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV----------------SLQ-----F-AR-LGV-L------ 239 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~----------------~~~-----~-~~-~~~-l------ 239 (883)
|+++|+|++.|++.|++.|++|++|++||+|+|.+..... ... + .. .+. +
T Consensus 84 V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 163 (393)
T PRK05656 84 LNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAEN 163 (393)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHH
Confidence 9999999999999999999999999999999997653110 000 0 00 000 0
Q ss_pred -------C-------------------CCCCCC----Cccc--------------------------------CCCCcc-
Q psy1120 240 -------S-------------------PDGRCK----SFDE--------------------------------AANGYC- 256 (883)
Q Consensus 240 -------s-------------------~~g~~~----pfd~--------------------------------~~~G~~- 256 (883)
+ +++..+ |+.. ..+|.+
T Consensus 164 ~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt 243 (393)
T PRK05656 164 LVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVT 243 (393)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEE
Confidence 0 111111 1100 022435
Q ss_pred ------cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 257 ------RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 257 ------~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
++|||+++||++++.|+ +++++|+|++..... ..+.+.+...+++++|+++|++|+||||+|+|
T Consensus 244 ~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~------~~~~~~~~~~a~~~al~~agl~~~dId~~e~~ 317 (393)
T PRK05656 244 AGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVD------PAIMGIGPVSATRRCLDKAGWSLAELDLIEAN 317 (393)
T ss_pred ccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCC------CcccchhHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 79999999999999886 489999999876432 11334567899999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 327 GTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 327 gtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
.+ +.+|..++.+.|+- ...++++.+.|..+||+.||+|+..++.++..|+.
T Consensus 318 d~-----f~~~~~~~~e~lg~-~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~ 368 (393)
T PRK05656 318 EA-----FAAQSLAVGKELGW-DAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR 368 (393)
T ss_pred Cc-----cHHHHHHHHHHhCC-CCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 76 45788888888863 23578999999999999999999999999999974
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.4e-20 Score=206.67 Aligned_cols=235 Identities=17% Similarity=0.169 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Ccee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~ 188 (883)
...|+.+++++||+|+|+++++++. |++|+..+++. ....++..++..+|+. .|++
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~----vi~G~~~~~~~------------------~~~~~a~~i~~~lGl~~~~p~~ 84 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVED----VIMGCANPEGA------------------TGANIARQIALRAGLPVTVPGM 84 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCc----EEEEEeecccc------------------cccHHHHHHHHHcCCCCCCcee
Confidence 4568999999999999999998884 88887654421 0123677888999985 7999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh-------------------H--HHH-----HhcCCCC--
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV-------------------S--LQF-----ARLGVLS-- 240 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~-------------------~--~~~-----~~~~~ls-- 240 (883)
+|+++|+||+.||+.|++.|++|++|++||||+|.+..... + +.. .....++
T Consensus 85 ~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~i~r~ 164 (392)
T PRK07108 85 TVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKE 164 (392)
T ss_pred eecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999998754210 0 000 0000000
Q ss_pred -----------------CCCC--------------CCC---------------------------------cc----cCC
Q psy1120 241 -----------------PDGR--------------CKS---------------------------------FD----EAA 252 (883)
Q Consensus 241 -----------------~~g~--------------~~p---------------------------------fd----~~~ 252 (883)
+++. -.| |. ...
T Consensus 165 ~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~~~g~lt~~ 244 (392)
T PRK07108 165 RQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALPGGVITAG 244 (392)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCCCCCCCcCC
Confidence 1110 001 10 112
Q ss_pred CCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecC
Q psy1120 253 NGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGT 328 (883)
Q Consensus 253 ~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgt 328 (883)
|...++||++++||++++.|+ +++++|+|++...+.. .+...+...+++++|+++|++|+||||+|.|
T Consensus 245 n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~agl~~~Did~~ei~-- 316 (392)
T PRK07108 245 NASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEP------DEMGIGPVFAVPKLLKQAGLKVDDIDLWELN-- 316 (392)
T ss_pred cCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCC------cccchhHHHHHHHHHHHcCCCHHHcCchHhh--
Confidence 334469999999999999886 4889999998875431 1233456799999999999999999999988
Q ss_pred CCCCCcHHHHHHHHHhhCC----CCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 329 GTKVGDPEEVQALENVFCP----GRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 329 gt~~gD~~E~~Ai~~~f~~----~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
|..++..++.- -...++.+.+.+..+||+.||+|+.-++.++..|++
T Consensus 317 --------eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~ 367 (392)
T PRK07108 317 --------EAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKR 367 (392)
T ss_pred --------hHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHh
Confidence 77777766521 113578889999999999999999999999999976
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-20 Score=207.86 Aligned_cols=233 Identities=20% Similarity=0.236 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceeee
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYTV 190 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~tv 190 (883)
.|+.++++++|+|+|+++++++. |++|+..+... ....+..++...||. -|.++|
T Consensus 29 ~L~~~a~~~al~~agi~~~~Id~----vv~G~~~~~~~-------------------g~~~~r~~~~~~Gl~~~~p~~~V 85 (392)
T PRK06633 29 MLAAHLIKDILQNSKIDPALVNE----VILGQVITGGS-------------------GQNPARQTLIHAGIPKEVPGYTI 85 (392)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCE----EEEEecCcccc-------------------ccHHHHHHHHHCCCCCCccchhh
Confidence 37899999999999999998874 88886543210 112445577888995 499999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hhhHH-----------H-----HHhc-CCCC------------
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PYVSL-----------Q-----FARL-GVLS------------ 240 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~~~~-----------~-----~~~~-~~ls------------ 240 (883)
+++|+||+.|+..|++.|++|++|++||||+|.+.. |.... . +... ..+.
T Consensus 86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~ 165 (392)
T PRK06633 86 NKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENIS 165 (392)
T ss_pred cchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHHHHHHH
Confidence 999999999999999999999999999999998763 21000 0 0000 0000
Q ss_pred ------------------------C-CCCCC----Cc---------------------------------cc-----CCC
Q psy1120 241 ------------------------P-DGRCK----SF---------------------------------DE-----AAN 253 (883)
Q Consensus 241 ------------------------~-~g~~~----pf---------------------------------d~-----~~~ 253 (883)
+ .+..+ |. +. ..|
T Consensus 166 ~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~~~~g~lt~~n 245 (392)
T PRK06633 166 KQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFDKNGVVTAGN 245 (392)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCccCCCCCEechh
Confidence 0 01000 11 10 012
Q ss_pred CcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCC
Q psy1120 254 GYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTG 329 (883)
Q Consensus 254 G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtg 329 (883)
...++|||+++||++++.|+ +++++|+|++...+... ..+.+...+++++|+++|++|+||||+|.|
T Consensus 246 ~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~------~~~~~~~~a~~~Al~~AGl~p~DID~~ei~--- 316 (392)
T PRK06633 246 ASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPS------IMGTAPVPASQKALSKAGWSVNDLEVIEVN--- 316 (392)
T ss_pred cCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcc------hhchHHHHHHHHHHHHcCCCHHHcCeeehh---
Confidence 24569999999999998886 47899999988765321 112456889999999999999999999988
Q ss_pred CCCCcHHHHHHHHHhhCCC----CCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 330 TKVGDPEEVQALENVFCPG----RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 330 t~~gD~~E~~Ai~~~f~~~----~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
|..++..+++.. +..++++.+.|..+||+.||+|+..++.++++|+++
T Consensus 317 -------dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~ 368 (392)
T PRK06633 317 -------EAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA 368 (392)
T ss_pred -------hHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc
Confidence 666666665321 234788999999999999999999999999999763
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.2e-20 Score=207.29 Aligned_cols=238 Identities=18% Similarity=0.204 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--ceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~t 189 (883)
..|+.+++.+||+|||+++++++ ++++|+..+++. . ...+..+...+|++. |.++
T Consensus 23 ~~La~~A~~~AL~dAgl~~~dID----~vi~~~~~~~~~------------------~-~~~a~~v~~~lGl~~~~~~~~ 79 (386)
T cd00751 23 DDLGAAVIKALLERAGLDPEEVD----DVIMGNVLQAGE------------------G-QNPARQAALLAGLPESVPATT 79 (386)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC----EEEEEeccCCCC------------------C-ChHHHHHHHHcCCCCCCchhh
Confidence 67899999999999999999887 477776544321 0 123556889999974 9999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH------HH---------HhcCCCC--------------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL------QF---------ARLGVLS-------------- 240 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~------~~---------~~~~~ls-------------- 240 (883)
|+++|+|++.||..|+++|++|++|.+||+|+|.+....... .+ ...+...
T Consensus 80 v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~ 159 (386)
T cd00751 80 VNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENV 159 (386)
T ss_pred hccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHH
Confidence 999999999999999999999999999999988653211000 00 0001000
Q ss_pred --------------------------------------------------CCCCCCC-------------cc-----cCC
Q psy1120 241 --------------------------------------------------PDGRCKS-------------FD-----EAA 252 (883)
Q Consensus 241 --------------------------------------------------~~g~~~p-------------fd-----~~~ 252 (883)
++...|+ |+ ...
T Consensus 160 ~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~ 239 (386)
T cd00751 160 AEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAG 239 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCC
Confidence 0000000 11 113
Q ss_pred CCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecC
Q psy1120 253 NGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGT 328 (883)
Q Consensus 253 ~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgt 328 (883)
|...++||++++||++++.|+ +++++|+|++.++++.. +...+...+++++|+++|++|+||||+|+|.+
T Consensus 240 d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~------~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~ 313 (386)
T cd00751 240 NASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA------IMGIGPVPAIPKALKRAGLTLDDIDLIEINEA 313 (386)
T ss_pred cCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc------ccchhHHHHHHHHHHHcCCCHHHcCEEEeech
Confidence 444569999999999999886 47899999999877532 23345679999999999999999999999977
Q ss_pred CCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 329 GTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 329 gt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
+|. .|... .+.|+- ...++++.+.+.++||+.+|+|+..+++++++|+..
T Consensus 314 f~~----~~~~~-~e~lg~-~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~ 363 (386)
T cd00751 314 FAA----QALAC-LKELGL-DPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR 363 (386)
T ss_pred hHH----HHHHH-HHHhCC-ChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc
Confidence 763 23333 344432 123677778888999999999999999999999863
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6e-19 Score=199.19 Aligned_cols=246 Identities=17% Similarity=0.173 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+++.+||+|||+++++++ +|++|+...+.. ....+..++..+|+++ |.++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID----~vi~g~~~~~~~-------------------~~~~a~~v~~~lGl~~~~~~~ 77 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIE----LVVVGSTAYRGI-------------------ELYPAPIVAEYSGLTGKVPLR 77 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc-------------------cCChHHHHHHHhCCCCCCeeE
Confidence 357999999999999999999887 477876432210 0123567889999976 7799
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH---H--------HHH--hcCCC-----------------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS---L--------QFA--RLGVL----------------- 239 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~---~--------~~~--~~~~l----------------- 239 (883)
|+++|+|++.||+.|++.|++|++|.+||+|+|.+...... . .+. ..+..
T Consensus 78 v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g 157 (385)
T PRK12578 78 VEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYG 157 (385)
T ss_pred EeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999975432100 0 000 01100
Q ss_pred -------------------CCCCCC----------------CCcccCCCCcccccceEEEEEccccccc----ceeEEEE
Q psy1120 240 -------------------SPDGRC----------------KSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVV 280 (883)
Q Consensus 240 -------------------s~~g~~----------------~pfd~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~ 280 (883)
.|.+.. .|+ ...|....+||++++||.+.+.|+ +.+++|+
T Consensus 158 ~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~ 236 (385)
T PRK12578 158 TTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKELKIDSPVWIT 236 (385)
T ss_pred cCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEE
Confidence 011111 011 123455579999999999998886 3678999
Q ss_pred eeeeccCCCCCCCCCCC-CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCC----------
Q psy1120 281 HAKTNCDGYKEQGITYP-SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPG---------- 348 (883)
Q Consensus 281 g~~~~~dg~~~~~~~~p-~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~---------- 348 (883)
|++..++.......... ...+...++++||++||++|+|||++|.|.++| ..|+.+++.. |+..
T Consensus 237 g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft----~~~l~~le~lGl~~~G~~~~~~~~G 312 (385)
T PRK12578 237 GIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFT----IAEIMGYEDLGFTEKGKGGKFIEEG 312 (385)
T ss_pred EEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcCh----HHHHHHHHHcCCCCCCchHHHHHCC
Confidence 99987765321111111 123567899999999999999999999999998 4788777765 2221
Q ss_pred C---CC--CeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 349 R---TT--PLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 349 ~---~~--~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
. .. |+.....--..||+.||+|+..++.++.+|+..
T Consensus 313 ~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ 353 (385)
T PRK12578 313 QSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDE 353 (385)
T ss_pred CccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCC
Confidence 0 11 333333333459999999999999999999864
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-19 Score=199.66 Aligned_cols=238 Identities=18% Similarity=0.219 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++++||+|+|+++++++. |++|+..+++.. ....+..++...|+. .|+++
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~----vi~g~~~~~~~~------------------~~~~a~~~~~~~Gl~~~~p~~~ 85 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGH----VVFGHVIPTEPR------------------DMYLSRVAAINAGVPQETPAFN 85 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCE----EEEeeeccccCC------------------CccHHHHHHHHcCCCCCCceEE
Confidence 358899999999999999998874 788865432210 012334455667884 59999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh----------------HH----HHHh------cCC-----
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV----------------SL----QFAR------LGV----- 238 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~----------------~~----~~~~------~~~----- 238 (883)
|+++|+|++.|++.|++.|++|.+|++||+|+|.+..... .. .+.. ++.
T Consensus 86 V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 165 (394)
T PRK09051 86 VNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENV 165 (394)
T ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHHHHHHH
Confidence 9999999999999999999999999999999997654210 00 0000 000
Q ss_pred ------------------------------------------------CCCCCCC------------CCccc-------C
Q psy1120 239 ------------------------------------------------LSPDGRC------------KSFDE-------A 251 (883)
Q Consensus 239 ------------------------------------------------ls~~g~~------------~pfd~-------~ 251 (883)
+.|+... +|+.. .
T Consensus 166 ~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~ 245 (394)
T PRK09051 166 AAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTA 245 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcccCCCccEeC
Confidence 0011111 11111 1
Q ss_pred CCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q psy1120 252 ANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHG 327 (883)
Q Consensus 252 ~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hg 327 (883)
.|...++||++++||++++.|+ +++++|+|++...+... +...+...+++++|+++|++|+||||+|.|.
T Consensus 246 ~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~------~~~~~~~~a~~~al~~agi~~~did~~ei~d 319 (394)
T PRK09051 246 GNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPE------YMGIGPVPATQKALERAGLTVADLDVIEANE 319 (394)
T ss_pred CcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCC------cccccHHHHHHHHHHHcCCCHHHcCEEEecC
Confidence 1223348999999999999886 47899999988764321 2234567899999999999999999999996
Q ss_pred CCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 328 TGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 328 tgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
+. .++..+..+.|+- ...++.+.+.+..+||+.||+|+..++.++.+|++
T Consensus 320 ~f-----~~~~~~~~e~lg~-~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~ 369 (394)
T PRK09051 320 AF-----AAQACAVTRELGL-DPAKVNPNGSGISLGHPVGATGAIITVKALYELQR 369 (394)
T ss_pred cc-----HHHHHHHHHHhCC-CccccCCCccHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 63 3566666677753 23466666666678999999999999999999976
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.8e-19 Score=196.86 Aligned_cols=236 Identities=16% Similarity=0.201 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++.+||+|+|+.+++++ .+++|+..++.. ....++..++..+|+. -|.++
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID----~vi~g~~~~~~~------------------~g~~~a~~~~~~lGl~~~~p~~~ 85 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPID----DLIIGCAMPEAE------------------QGLNMARNIGALAGLPYTVPAIT 85 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCC----EEEEEecccccc------------------ccchHHHHHHHHcCCCCCcceee
Confidence 34889999999999998777776 488886543210 0012345688889997 49999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh-----------------H---HHH------HhcCCC----
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV-----------------S---LQF------ARLGVL---- 239 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~-----------------~---~~~------~~~~~l---- 239 (883)
|+++|+||+.|++.|++.|++|++|++||+|+|.+..... + +.+ .+.|.-
T Consensus 86 V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~tre~~ 165 (391)
T PRK07661 86 INRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQ 165 (391)
T ss_pred hhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHHhCCCHHHH
Confidence 9999999999999999999999999999999997653210 0 000 000000
Q ss_pred -------------CCC-CCC---------------------------------------------CC-cc-----cCCCC
Q psy1120 240 -------------SPD-GRC---------------------------------------------KS-FD-----EAANG 254 (883)
Q Consensus 240 -------------s~~-g~~---------------------------------------------~p-fd-----~~~~G 254 (883)
.+. |+. +| |. ...|.
T Consensus 166 a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~ 245 (391)
T PRK07661 166 DAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNS 245 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEecccc
Confidence 000 000 01 10 11233
Q ss_pred cccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC
Q psy1120 255 YCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330 (883)
Q Consensus 255 ~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt 330 (883)
...+||++++||.+++.|+ +++++|+|++..++... +...+...+++++|+++|++|+|||++|.|
T Consensus 246 ~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~------~~~~~~~~a~~~al~~agl~~~did~~ei~---- 315 (391)
T PRK07661 246 SQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPE------VMGIGPIAAIPKALKLAGLELSDIGLFELN---- 315 (391)
T ss_pred CCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCc------ccchHHHHHHHHHHHHcCCCHHHCCEEEeC----
Confidence 4469999999999998886 47889999988765321 123467899999999999999999999976
Q ss_pred CCCcHHHHHHHHH--hhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 331 KVGDPEEVQALEN--VFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 331 ~~gD~~E~~Ai~~--~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
|..+.+.+.. .|+- ...++++.+.+..+||+.||||+..++.++.+|++
T Consensus 316 ---d~f~~~~l~~~e~lg~-~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~ 366 (391)
T PRK07661 316 ---EAFASQSIQVIRELGL-DEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR 366 (391)
T ss_pred ---CHHHHHHHHHHHHcCC-CCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 7777777763 4542 23478888889999999999999999999999975
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=195.81 Aligned_cols=235 Identities=17% Similarity=0.201 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHH-HCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 113 RIILEKTYEAVI-DAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 113 rl~l~aa~eALe-dAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
.|+.+++.++|+ ++|+++++++. |++|+..... .....++..++...||. -|+++
T Consensus 28 ~L~~~a~~~al~r~a~i~~~~Id~----vi~G~~~~~~------------------~~g~~~ar~~~l~~Gl~~~vp~~t 85 (400)
T PRK13359 28 DLGAVPLKALVERNPDVDWAAIDD----VIYGCANQAG------------------EDNRNVARMSLLLAGLPHGVPGST 85 (400)
T ss_pred HHHHHHHHHHHHhccCCCHHHCCE----EEEEeccccc------------------cccccHHHHHHHHcCCCCCCceEE
Confidence 477889999999 57999998884 8888653221 00124567788889995 49999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH-----HH-------Hh--------c---CCC-------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL-----QF-------AR--------L---GVL------- 239 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~-----~~-------~~--------~---~~l------- 239 (883)
|+++|+||+.|+++|++.|++|++|++||||+|.+.....+. .+ .. . ...
T Consensus 86 V~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 165 (400)
T PRK13359 86 INRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPE 165 (400)
T ss_pred EeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccccCCHHH
Confidence 999999999999999999999999999999999876522100 00 00 0 000
Q ss_pred -----------C-------------------CCCCCC-------------------------------------Cccc--
Q psy1120 240 -----------S-------------------PDGRCK-------------------------------------SFDE-- 250 (883)
Q Consensus 240 -----------s-------------------~~g~~~-------------------------------------pfd~-- 250 (883)
+ ++|..+ .|+.
T Consensus 166 ~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~l~p~f~~~g 245 (400)
T PRK13359 166 TAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAKLKGVVRPDG 245 (400)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhcCCCccCCCC
Confidence 0 111110 1221
Q ss_pred ---CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy1120 251 ---AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWI 323 (883)
Q Consensus 251 ---~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~v 323 (883)
..|...++||++++||++++.|+ +++++|+|++..... ..+...+...+++++|+++|++|+||||+
T Consensus 246 ~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~------p~~~~~~~~~A~~~al~~AGl~~~DID~i 319 (400)
T PRK13359 246 TVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVE------PRVMGIGPAPATQKLLARLGMTLDQFDVI 319 (400)
T ss_pred ceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC------CCccchhHHHHHHHHHHHhCCCHHHcCcC
Confidence 12223358999999999999886 478999999876422 11344566899999999999999999999
Q ss_pred EEecCCCCCCcHHHHHHHH--HhhCCCCCCCeeecccCCC--CCCCcccchhhHHHHHHHHhhc
Q psy1120 324 EAHGTGTKVGDPEEVQALE--NVFCPGRTTPLLIGSVKSN--IGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 324 e~hgtgt~~gD~~E~~Ai~--~~f~~~~~~~~~igs~K~~--~GH~~~AsG~~~li~~~l~l~~ 383 (883)
|.| |..+.+.+. +.|+-. ...++|+..++. +||+.||+|+..++.++.+|+.
T Consensus 320 ei~-------dafa~~~l~~~e~lg~~-~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~ 375 (400)
T PRK13359 320 ELN-------EAFASQGLAVLRELGLA-DDDARVNPNGGAIALGHPLGASGARLVTTALYQLER 375 (400)
T ss_pred ccC-------cHhHHHHHHHHHHcCCC-CCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhh
Confidence 966 666655443 445421 124678888886 8999999999999999999975
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-18 Score=195.40 Aligned_cols=246 Identities=17% Similarity=0.211 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC-CCceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV-NGPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l-~Gps~t 189 (883)
...|+.+++++||+|||+++++++ ++++|+...+.. ....+..++..+|+ ..|.++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id----~vi~g~~~~~~~-------------------~~~~a~~va~~lGl~~~~~~~ 72 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADID----AVVVGNAAGGRF-------------------QSFPGALIAEYLGLLGKPATR 72 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccccccc-------------------ccchHHHHHHHcCCCCcceee
Confidence 357899999999999999988776 477776533211 12356779999999 469999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH---H------HHH---hcCCCC-----------------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS---L------QFA---RLGVLS----------------- 240 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~---~------~~~---~~~~ls----------------- 240 (883)
|+.+|+|++.||..|++.|++|++|++||+|+|.+...... . .+. ..+.+.
T Consensus 73 v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g 152 (375)
T cd00829 73 VEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYG 152 (375)
T ss_pred EeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999976542110 0 000 011111
Q ss_pred --------------------CCC----------------CCCCcccCCCCcccccceEEEEEccccccc---ceeEEEEe
Q psy1120 241 --------------------PDG----------------RCKSFDEAANGYCRSEAVCIMYLQKSKDAK---RVYARVVH 281 (883)
Q Consensus 241 --------------------~~g----------------~~~pfd~~~~G~~~gEGa~~vvL~~~~~A~---~i~a~I~g 281 (883)
|.. .+.|+. ..|...++||++++||.+.+.|+ ++++.|+|
T Consensus 153 ~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl~s~~~a~~~~~~~~~i~g 231 (375)
T cd00829 153 TTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVLASEERARELTDRPVWILG 231 (375)
T ss_pred CCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEEecHHHHhhcCCCCeEEEE
Confidence 000 001111 14556789999999999999886 47899999
Q ss_pred eeeccCCCCCCCCCC-CCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCCCC---------
Q psy1120 282 AKTNCDGYKEQGITY-PSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPGRT--------- 350 (883)
Q Consensus 282 ~~~~~dg~~~~~~~~-p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~~~--------- 350 (883)
++..++......... ....+...+++++|++||++++|||++|.|.++|. .+...++.. |+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~----~~l~~~e~lGl~~~g~~~~~~~~g~ 307 (375)
T cd00829 232 VGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTI----AELLALEDLGFCEKGEGGKLVREGD 307 (375)
T ss_pred EEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCCchHHHHHCCC
Confidence 999887643211111 24677789999999999999999999999999986 455555544 222111
Q ss_pred ----CCeeecccCC--CCCCCcccchhhHHHHHHHHhhcC
Q psy1120 351 ----TPLLIGSVKS--NIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 351 ----~~~~igs~K~--~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
..++|+...+ ..||+.+++|+..++.++.+|+..
T Consensus 308 ~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ 347 (375)
T cd00829 308 TAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGE 347 (375)
T ss_pred ccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCC
Confidence 1223333333 369999999999999999999864
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-18 Score=193.68 Aligned_cols=236 Identities=16% Similarity=0.196 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Ccee
Q psy1120 112 CRIILEKTYEAVI-DAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSY 188 (883)
Q Consensus 112 ~rl~l~aa~eALe-dAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~ 188 (883)
..|+.+++.++|+ |+|+++++++. |++|+..+.. ......+..++...||. -|++
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id~----v~~G~~~~~~------------------~~~~~~ar~~~~~~Gl~~~~p~~ 83 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAIDD----VIYGCANQAG------------------EDNRNVARMAALLAGLPVSVPGT 83 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCE----EEEEeccccc------------------cccccHHHHHHHHcCCCCCCceE
Confidence 3488999999999 68999988874 8888653211 00123455688999995 5999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH-------H---------------------H-HH-----
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS-------L---------------------Q-FA----- 234 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~-------~---------------------~-~~----- 234 (883)
+|+++|+||+.|++.|++.|++|++|++||||+|.+...... + . |.
T Consensus 84 ~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M~ 163 (400)
T TIGR02430 84 TVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMP 163 (400)
T ss_pred EeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccCcHH
Confidence 999999999999999999999999999999999987642200 0 0 00
Q ss_pred --------hcC-------------------------------------------CCCCCCCCC-------------Ccc-
Q psy1120 235 --------RLG-------------------------------------------VLSPDGRCK-------------SFD- 249 (883)
Q Consensus 235 --------~~~-------------------------------------------~ls~~g~~~-------------pfd- 249 (883)
+.| .+.++...| .|+
T Consensus 164 ~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~~~~~v~~p 243 (400)
T TIGR02430 164 ETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVVRP 243 (400)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHhcCCCcccC
Confidence 000 001111111 111
Q ss_pred ----cCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy1120 250 ----EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLA 321 (883)
Q Consensus 250 ----~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~ 321 (883)
...|....+||++++||++++.|+ +++++|+|++....... +...+...+++++|+++|++|+|||
T Consensus 244 ~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~------~~~~~~~~a~~~al~~Agl~~~DID 317 (400)
T TIGR02430 244 DGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPR------IMGIGPVPATQKLLARAGLSIDQFD 317 (400)
T ss_pred CCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCc------cccchHHHHHHHHHHHhCCCHHHCC
Confidence 112334469999999999999886 47899999987654321 2334568999999999999999999
Q ss_pred EEEEecCCCCCCcHHHHH--HHHHhhCCCCCCCeeecccCCC--CCCCcccchhhHHHHHHHHhhc
Q psy1120 322 WIEAHGTGTKVGDPEEVQ--ALENVFCPGRTTPLLIGSVKSN--IGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 322 ~ve~hgtgt~~gD~~E~~--Ai~~~f~~~~~~~~~igs~K~~--~GH~~~AsG~~~li~~~l~l~~ 383 (883)
|+|.| |..+.+ +..+.|+-. ....+|+..++. +||+.||+|+..++.++.+|+.
T Consensus 318 ~~ei~-------D~f~~~~l~~~e~lG~~-~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~ 375 (400)
T TIGR02430 318 VIELN-------EAFAAQALAVLRELGLA-DDDARVNPNGGAIALGHPLGASGARLVLTALRQLER 375 (400)
T ss_pred CcccC-------cHHHHHHHHHHHHcCCC-CCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHh
Confidence 99966 665443 344566521 123578888885 8999999999999999999975
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-18 Score=193.45 Aligned_cols=235 Identities=17% Similarity=0.199 Sum_probs=168.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceeee
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYTV 190 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~tv 190 (883)
.|+.+++.++|+++|+++++++. |++|+..+.... ....+...+...|+ +-|+++|
T Consensus 30 dLa~~A~~~al~~agi~p~~ID~----vi~G~~~~~~~~------------------~~~~~r~a~~~~Gl~~~~pa~~V 87 (402)
T PRK08242 30 RLAAGLLEALRDRNGLDTAAVDD----VVLGCVTPVGDQ------------------GADIARTAVLAAGLPETVPGVQI 87 (402)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCE----EEEEecCCCccc------------------cccHHHHHHHHcCCCCCCCeEEE
Confidence 47899999999999999998874 888876542110 12234445567788 3599999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh-----------HHH----HHhcCC-----------------
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV-----------SLQ----FARLGV----------------- 238 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~-----------~~~----~~~~~~----------------- 238 (883)
+.+|+|++.||+.|+++|++|++|.+||+|+|.+..... ... +..+|.
T Consensus 88 n~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~d 167 (402)
T PRK08242 88 NRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVD 167 (402)
T ss_pred cchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999999999999999998764210 000 000000
Q ss_pred ----------------------------------CCCCCCCC-------------CcccC--------------------
Q psy1120 239 ----------------------------------LSPDGRCK-------------SFDEA-------------------- 251 (883)
Q Consensus 239 ----------------------------------ls~~g~~~-------------pfd~~-------------------- 251 (883)
+.+|...| .|+..
T Consensus 168 ~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~~~~ 247 (402)
T PRK08242 168 AYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERI 247 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccccccccccccc
Confidence 11121111 13321
Q ss_pred ------CCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy1120 252 ------ANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLA 321 (883)
Q Consensus 252 ------~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~ 321 (883)
.|....+||++++||.+.+.|+ +++++|+|++...+... ...+ +...+++++|+++|++++|||
T Consensus 248 ~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~-~~~~-----~~~~a~~~al~~AGl~~~DID 321 (402)
T PRK08242 248 NHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPT-IMLT-----GPVPATRKALAKAGLTVDDID 321 (402)
T ss_pred cCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCch-hhcc-----cHHHHHHHHHHHcCCCHHHCC
Confidence 1333579999999999999886 47899999988765422 1112 236799999999999999999
Q ss_pred EEEEecCCCCCCcHHHHHHH--HHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 322 WIEAHGTGTKVGDPEEVQAL--ENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 322 ~ve~hgtgt~~gD~~E~~Ai--~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
++|.| |..+.+.+ .+.|+- ...++++.+.+..+||+.||+|+..++.++.+|++
T Consensus 322 ~~ei~-------daFa~~~l~~~e~lG~-~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~ 377 (402)
T PRK08242 322 LFELN-------EAFASVVLRFMQALDI-PHDKVNVNGGAIAMGHPLGATGAMILGTVLDELER 377 (402)
T ss_pred EEEec-------chhhHHHHHHHHHhCC-CCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHh
Confidence 99988 44444333 344542 23578899999999999999999999999999975
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-18 Score=193.90 Aligned_cols=235 Identities=21% Similarity=0.285 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHHHC-CCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Ccee
Q psy1120 112 CRIILEKTYEAVIDA-GINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSY 188 (883)
Q Consensus 112 ~rl~l~aa~eALedA-G~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~ 188 (883)
..|+.+++++||+|+ |+++++++ .|++|+..++... ....+..+....|+. -|++
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID----~vi~g~~~~~~~~------------------~~~~ar~~~~~~Gl~~~~p~~ 89 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIE----DAIVGCAMPEAEQ------------------GLNVARIGALLAGLPNSVGGV 89 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCC----EEEEEecCCCCCC------------------CchHHHHHHHHcCCCCCCcee
Confidence 458899999999997 99999888 4888875543210 112222345556885 4799
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh-------H-HHHHh---cCC----------------CC-
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV-------S-LQFAR---LGV----------------LS- 240 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~-------~-~~~~~---~~~----------------ls- 240 (883)
+|+++|+|++.|++.|++.|++|++|++||+|+|.+..... . ..+.. .+. ++
T Consensus 90 ~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitr 169 (399)
T PRK09052 90 TVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSR 169 (399)
T ss_pred eecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999999999999997653220 0 00000 000 00
Q ss_pred -----------------CC-CCC----CCc-------------------------------------------c-----c
Q psy1120 241 -----------------PD-GRC----KSF-------------------------------------------D-----E 250 (883)
Q Consensus 241 -----------------~~-g~~----~pf-------------------------------------------d-----~ 250 (883)
++ |+. .|. + .
T Consensus 170 e~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt 249 (399)
T PRK09052 170 EDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVT 249 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEE
Confidence 00 000 011 1 0
Q ss_pred CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 251 AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 251 ~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
..|...++||++++||++++.|+ +++++|+|++...+... +...+...+++++|++||++|+|||++|.|
T Consensus 250 ~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~------~~~~~~~~A~~~al~~Agi~~~did~~ei~ 323 (399)
T PRK09052 250 AGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPE------IMGIGPIEAIPAALKQAGLKQDDLDWIELN 323 (399)
T ss_pred CCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCC------ccchhHHHHHHHHHHHcCCCHHHcCEEEeC
Confidence 11225579999999999998886 48899999988754321 223356899999999999999999999977
Q ss_pred cCCCCCCcHHHHH--HHHHhhCCCCCCCeeecccCC--CCCCCcccchhhHHHHHHHHhhcC
Q psy1120 327 GTGTKVGDPEEVQ--ALENVFCPGRTTPLLIGSVKS--NIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 327 gtgt~~gD~~E~~--Ai~~~f~~~~~~~~~igs~K~--~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
|+.+.+ +..+.|+-. ..+|+..++ .+||+.||+|+..++.++++|+++
T Consensus 324 -------D~f~~~~l~~~e~lg~~---~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~ 375 (399)
T PRK09052 324 -------EAFAAQSLAVIRDLGLD---PSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT 375 (399)
T ss_pred -------cHHHHHHHHHHHHhCCC---CcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc
Confidence 664444 344556421 234555555 679999999999999999999874
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.5e-18 Score=193.32 Aligned_cols=238 Identities=16% Similarity=0.209 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--ceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~t 189 (883)
..|+.+++.+||+|+|+++++++. |++|+..+++.. ....+..++..+|+.. |.++
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID~----vv~G~~~~~~~~------------------~~~~~r~~a~~~Gl~~~~pa~~ 129 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVGD----IVVGTVLAPGSQ------------------RANECRMAAFYAGFPETVPVRT 129 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEEeecCcccc------------------cchHHHHHHHHCCCCCCcceEE
Confidence 568999999999999999999884 788765433210 0112234566779864 8899
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH---------------------HH------HHhcCCC---
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS---------------------LQ------FARLGVL--- 239 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~---------------------~~------~~~~~~l--- 239 (883)
|+++|+||+.|++.|++.|++|++|++||+|+|.+...... ++ ..+.|.-
T Consensus 130 V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~ 209 (452)
T PLN02287 130 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREE 209 (452)
T ss_pred EeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHH
Confidence 99999999999999999999999999999999976432100 00 0000000
Q ss_pred --------------CCC-CCCC---------------------CcccC---------------------------CCCcc
Q psy1120 240 --------------SPD-GRCK---------------------SFDEA---------------------------ANGYC 256 (883)
Q Consensus 240 --------------s~~-g~~~---------------------pfd~~---------------------------~~G~~ 256 (883)
.+. ++.+ .++.+ .|...
T Consensus 210 la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~ 289 (452)
T PLN02287 210 QDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQ 289 (452)
T ss_pred HHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCC
Confidence 011 1110 11100 24455
Q ss_pred cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~ 332 (883)
++|||+++||.+++.|+ +|++++.+++..... ..+...+...+++++|++||++|+||||+|.|...+.
T Consensus 290 ~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~~------~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~- 362 (452)
T PLN02287 290 VSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVD------PAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFAS- 362 (452)
T ss_pred cCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccCC------CccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHH-
Confidence 79999999999998886 478888887643211 1123445689999999999999999999999933221
Q ss_pred CcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 333 gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
.|+..++. |+- ...|+++.+.+..+||+.||||+..++.++.+|++
T Consensus 363 ---~~l~~~e~-lG~-~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~ 408 (452)
T PLN02287 363 ---QFVYCCKK-LGL-DPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR 408 (452)
T ss_pred ---HHHHHHHH-cCC-CccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHh
Confidence 22222222 221 23478888889999999999999999999999976
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.9e-18 Score=190.72 Aligned_cols=248 Identities=18% Similarity=0.198 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~t 189 (883)
...|+.+++++||+|||+++++++ +|++|+..+++... ... .+..+...++++ .|.++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId----~vi~g~~~~~~~~~---------------~~~--~~~~~~~~~gl~~~p~~~ 80 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVD----GIFLGHFNAGFSPQ---------------DFP--ASLVLQADPALRFKPATR 80 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCcccc---------------ccc--hhHHHHHhcCCCCCceee
Confidence 357899999999999999998887 58888654332100 000 011223344664 48999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH--------HHHh------cCC----------------C
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL--------QFAR------LGV----------------L 239 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~--------~~~~------~~~----------------l 239 (883)
|+++|+|++.||+.|++.|++|++|.+||+|+|.+....... .+.. .++ +
T Consensus 81 v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~ 160 (389)
T PRK07516 81 VENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGD 160 (389)
T ss_pred eccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999999999854321100 0000 000 0
Q ss_pred C------------------CCCC-CCCccc------------------CCCCcccccceEEEEEcccccccc--eeEEEE
Q psy1120 240 S------------------PDGR-CKSFDE------------------AANGYCRSEAVCIMYLQKSKDAKR--VYARVV 280 (883)
Q Consensus 240 s------------------~~g~-~~pfd~------------------~~~G~~~gEGa~~vvL~~~~~A~~--i~a~I~ 280 (883)
+ |.-. -++++. ..|...++||++++||.+++.|++ .+++|+
T Consensus 161 ~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~~~~v~i~ 240 (389)
T PRK07516 161 QSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARALQRAVRFR 240 (389)
T ss_pred CHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhcCCCEEEE
Confidence 0 1000 011111 134556799999999999988863 468899
Q ss_pred eeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCC-----------
Q psy1120 281 HAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPG----------- 348 (883)
Q Consensus 281 g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~----------- 348 (883)
|++...+.............+...+++++|+++|++|+|||++|.|.++|.. |...++.. |++.
T Consensus 241 g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~----~~~~~e~lg~~~~G~~~~~~~~g~ 316 (389)
T PRK07516 241 ARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA----ELIEYEAMGLAPPGQGARAIREGW 316 (389)
T ss_pred EEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH----HHHHHHHcCCCCCCchHHHHHCCC
Confidence 9998877543212221234677789999999999999999999999999973 44444332 2211
Q ss_pred --CCCCeee---cccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 349 --RTTPLLI---GSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 349 --~~~~~~i---gs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
....++| |+.+ .+||+.||+|+..++.++++|+..
T Consensus 317 ~~~~g~~pvN~sGG~l-a~Ghp~gasG~~~~~e~~~QL~g~ 356 (389)
T PRK07516 317 TAKDGKLPVNPSGGLK-AKGHPIGATGVSMHVLAAMQLTGE 356 (389)
T ss_pred ccCCCCeeecCCCCcc-cCCCCccHHHHHHHHHHHHHhcCC
Confidence 0112333 3345 479999999999999999999875
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-18 Score=192.73 Aligned_cols=237 Identities=18% Similarity=0.220 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
..|+.+++++||+|||+++++++. |++|+...++. . ..++...+...|+ +.|+++
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID~----vi~G~~~~~~~------------------~-~~~~~~~~l~ag~~~~~p~~~ 88 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQIDE----VVMGCVLPAGQ------------------G-QAPARQAALGAGLPLSVGCTT 88 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCE----EEEEecCCCcc------------------c-hHHHHHHHHcCCCCCCccEee
Confidence 458899999999999999998874 88886543211 0 1122223344555 358899
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hh--h-------------HHHH--Hhc-CCC-----------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PY--V-------------SLQF--ARL-GVL----------- 239 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~--~-------------~~~~--~~~-~~l----------- 239 (883)
|+++|+||+.|++.|++.|++|++|++||+|+|.+.. |. . ...+ ... ..+
T Consensus 89 V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 168 (397)
T PRK06954 89 VNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAE 168 (397)
T ss_pred ccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHHHHH
Confidence 9999999999999999999999999999999998763 11 0 0000 000 000
Q ss_pred --------C-------------------CCCCCC----Cccc-------------------------------------C
Q psy1120 240 --------S-------------------PDGRCK----SFDE-------------------------------------A 251 (883)
Q Consensus 240 --------s-------------------~~g~~~----pfd~-------------------------------------~ 251 (883)
+ +.+..+ |++. .
T Consensus 169 ~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f~~~g~lt~ 248 (397)
T PRK06954 169 ECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAFSKTGTVTA 248 (397)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCccCCCCcEEc
Confidence 0 111111 1110 0
Q ss_pred CCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q psy1120 252 ANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHG 327 (883)
Q Consensus 252 ~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hg 327 (883)
.|...++||++++||.+++.|+ +++++|+|++...+... .+ ..+...+++++|+++|++|+||||+|.|.
T Consensus 249 ~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~--~~----~~~~~~a~~~al~~agl~~~Did~~ei~d 322 (397)
T PRK06954 249 ANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPS--KF----TTAPVGAIRKLFEKNGWRAAEVDLFEINE 322 (397)
T ss_pred cccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcc--cc----cchHHHHHHHHHHHcCCCHHHCCEEehhh
Confidence 1223459999999999998886 47788988776543211 11 12457899999999999999999999996
Q ss_pred CCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 328 TGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 328 tgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
..|. .|+.++++. +- ...++++.+.+..+||+.||+|+..++.++++|+.
T Consensus 323 ~fa~----~~l~~~e~l-g~-~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~ 372 (397)
T PRK06954 323 AFAV----VTMAAMKEH-GL-PHEKVNVNGGACALGHPIGASGARILVTLIGALRA 372 (397)
T ss_pred HHHH----HHHHHHHHh-CC-CcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHh
Confidence 5553 445444443 21 23578899999999999999999999999999975
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-18 Score=194.60 Aligned_cols=239 Identities=19% Similarity=0.209 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Ccee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~ 188 (883)
...|+.+++.+||+|||+++++++ ++++|+...++.. ...+..++..+|+. .|.+
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID----~vv~g~~~~~~~~-------------------~~~a~~va~~lGl~~~~~~~ 77 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELID----DVIFGNVLQAGEQ-------------------QNIARQAALLAGLPESVPAY 77 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCCC-------------------ChHHHHHHHHcCCCCCceee
Confidence 356899999999999999999887 4777754332100 12345688888985 4899
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH-----------H-----H-HhcCCCCC----------
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL-----------Q-----F-ARLGVLSP---------- 241 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~-----------~-----~-~~~~~ls~---------- 241 (883)
.|+++|+|++.||..|+++|++|.+|.+||+|+|.+....... . + ...++..+
T Consensus 78 ~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a 157 (386)
T TIGR01930 78 TVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTA 157 (386)
T ss_pred eecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHH
Confidence 9999999999999999999999999999999988643211000 0 0 00010000
Q ss_pred ------CC-----------------CC--C---------Cc---------------------c-----------------
Q psy1120 242 ------DG-----------------RC--K---------SF---------------------D----------------- 249 (883)
Q Consensus 242 ------~g-----------------~~--~---------pf---------------------d----------------- 249 (883)
.| .. + |. .
T Consensus 158 ~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l 237 (386)
T TIGR01930 158 ENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTV 237 (386)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCee
Confidence 00 00 0 21 0
Q ss_pred cCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEE
Q psy1120 250 EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEA 325 (883)
Q Consensus 250 ~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~ 325 (883)
...|...++||++++||++++.|+ +++++|+|++...+.. .+...+...+++++|+++|++|+||||+|.
T Consensus 238 ~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~------~~~~~~~~~a~~~a~~~Agi~~~did~~e~ 311 (386)
T TIGR01930 238 TAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDP------EIMGLGPVPAIPKALKKAGLSISDIDLFEI 311 (386)
T ss_pred eCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCC------ccccccHHHHHHHHHHHcCCCHHHCCeeeh
Confidence 012333458999999999999886 4789999998865421 122345579999999999999999999999
Q ss_pred ecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 326 HGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 326 hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
|.+.|. +....-+.|+- ...|+++.+.|..+||+.+|+|+..++.++++|+.+
T Consensus 312 ~d~fa~-----~~~~~~e~lG~-~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~ 364 (386)
T TIGR01930 312 NEAFAA-----QVLACIKELGL-DLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR 364 (386)
T ss_pred cchhHH-----HHHHHHHHhCC-ChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc
Confidence 977763 33333344542 234678888899999999999999999999999864
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-18 Score=191.93 Aligned_cols=239 Identities=16% Similarity=0.193 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++.+||+|+|+++++++. |++|+..++... ..+ ++..++...|+. -|.++
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id~----v~~G~~~~~~~~-----------------~~~-~ar~~~~~~Glp~~~p~~t 84 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIED----VILGCTNQAGED-----------------SRN-VARNALLLAGLPVTVPGQT 84 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEEeccccccc-----------------ccc-HHHHHHHhcCCCCCCceee
Confidence 458899999999999999998874 888865432100 012 244577788885 59999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH------------HHHHh--------c------C-----C
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS------------LQFAR--------L------G-----V 238 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~------------~~~~~--------~------~-----~ 238 (883)
|+++|+||+.|++.|++.|++|++|++||||+|.+...... ..+.. . . .
T Consensus 85 V~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~mg~ 164 (401)
T PRK08131 85 VNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPE 164 (401)
T ss_pred eechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccCCHHH
Confidence 99999999999999999999999999999999987542210 00000 0 0 0
Q ss_pred ----------CC-------------------CCCCC----CCccc-----------------------------------
Q psy1120 239 ----------LS-------------------PDGRC----KSFDE----------------------------------- 250 (883)
Q Consensus 239 ----------ls-------------------~~g~~----~pfd~----------------------------------- 250 (883)
++ +.+.- .|.+.
T Consensus 165 ~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l~p~f~~ 244 (401)
T PRK08131 165 TGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKLKPLFEG 244 (401)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcCCCCCCC
Confidence 00 01100 01110
Q ss_pred ----CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy1120 251 ----AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAW 322 (883)
Q Consensus 251 ----~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ 322 (883)
..|....+||++++||.+++.|+ +++++|+|++...+... . ...+...+++++|+++|++|+|||+
T Consensus 245 g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~---~---~~~~~~~a~~~a~~~agl~~~did~ 318 (401)
T PRK08131 245 GVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPR---I---MGIGPVEAIKKALARAGLTLDDMDI 318 (401)
T ss_pred CCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCc---c---ccchHHHHHHHHHHHcCCCHHHCCe
Confidence 01445569999999999998885 57889999988765321 1 1235578999999999999999999
Q ss_pred EEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCC--CCCCCcccchhhHHHHHHHHhhcC
Q psy1120 323 IEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKS--NIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 323 ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~--~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
+|.|...|. .|+..++ .++-. ...++|+...+ .+||+.||+|+..++.++.+|+.+
T Consensus 319 ~ei~d~Fa~----~~l~~~e-~lg~~-~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~ 376 (401)
T PRK08131 319 IEINEAFAS----QVLGCLK-GLGVD-FDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRR 376 (401)
T ss_pred ehhccHHHH----HHHHHHH-HcCCC-CCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhc
Confidence 999955443 2333222 23211 11344555555 469999999999999999999864
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4e-18 Score=192.68 Aligned_cols=238 Identities=15% Similarity=0.184 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHC-CCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 112 CRIILEKTYEAVIDA-GINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedA-G~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
..|+.+++.+||+|+ |+++++|+ +|++|+..++. ..+ ...+..++..+|+++ |+++
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID----~vv~g~~~~~~---------------~~g---~~~~~~~a~~lGl~~~p~~~ 85 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDID----DLMLGCGLPGG---------------EQG---FNMARVVAVLLGYDFLPGTT 85 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEcccccc---------------ccc---CCHHHHHHHHcCCCCCCeee
Confidence 458899999999997 99999998 47777533210 001 124467889999975 9999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh-------------HH---------------HHHh-c----
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV-------------SL---------------QFAR-L---- 236 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~-------------~~---------------~~~~-~---- 236 (883)
|+++|+||+.|++.|+++|++|++|++||+|+|.+..... +. .|.. .
T Consensus 86 v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 165 (406)
T PRK07851 86 VNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGL 165 (406)
T ss_pred eeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccccccccc
Confidence 9999999999999999999999999999999886422100 00 0000 0
Q ss_pred ------CC------------CC-------------------CCCC---------------------CC-Ccc--------
Q psy1120 237 ------GV------------LS-------------------PDGR---------------------CK-SFD-------- 249 (883)
Q Consensus 237 ------~~------------ls-------------------~~g~---------------------~~-pfd-------- 249 (883)
.+ ++ .+++ .| +++
T Consensus 166 ~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t~e~v~~s~ 245 (406)
T PRK07851 166 LPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTTYEKVSQLK 245 (406)
T ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcCHHHHhcCC
Confidence 00 00 0010 00 011
Q ss_pred ----c-----CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy1120 250 ----E-----AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVD 316 (883)
Q Consensus 250 ----~-----~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~ 316 (883)
. ..|...++||++++||.+++.|+ +++++|+|++...+.. . +...+...++++||++||++
T Consensus 246 ~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~---~---~~~~~~~~a~~~al~~Agi~ 319 (406)
T PRK07851 246 PVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSP---E---IMGLGPVEASKQALARAGMS 319 (406)
T ss_pred CccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCC---C---ccchhHHHHHHHHHHHhCCC
Confidence 0 01334469999999999999886 4779999998764421 1 22335678999999999999
Q ss_pred CCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 317 PKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 317 ~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
|+||||+|.|.+.|. .|...++. |+- ...|+.+.+.+..+||+.|++|+..++.++.+|++
T Consensus 320 ~~did~~ei~d~f~~----~~l~~le~-lg~-~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~ 380 (406)
T PRK07851 320 IDDIDLVEINEAFAA----QVLPSARE-LGI-DEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQT 380 (406)
T ss_pred HHHCCeehhhhHHHH----HHHHHHHH-hCC-CccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHh
Confidence 999999998844432 23333332 321 12478888899999999999999999999999975
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.2e-18 Score=189.38 Aligned_cols=236 Identities=18% Similarity=0.219 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++.+||+|||+++++++ +|++|+..... .+ .+ .+..++..+||. -|..+
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID----~vv~g~~~~~~----------------~~--~~-~~~~~~~~~Gl~~~~p~~~ 82 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQ----EVFFGNVLSAN----------------LG--QA-PARQAALGAGLPPSTICTT 82 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCcCC----------------cC--Cc-HHHHHHHhcCCCCCCceEE
Confidence 56899999999999999999888 47787532110 01 01 234577888885 48899
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh---------------H-----------------H------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV---------------S-----------------L------ 231 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~---------------~-----------------~------ 231 (883)
|+++|+|++.||+.|+++|++|+||++||+|+|.+..... . +
T Consensus 83 v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 162 (394)
T PLN02644 83 VNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAEL 162 (394)
T ss_pred EeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHH
Confidence 9999999999999999999999999999999887642100 0 0
Q ss_pred HHHhcCCC----------C-------CC-CCCC--------------C---cc---------------------------
Q psy1120 232 QFARLGVL----------S-------PD-GRCK--------------S---FD--------------------------- 249 (883)
Q Consensus 232 ~~~~~~~l----------s-------~~-g~~~--------------p---fd--------------------------- 249 (883)
...+.|.- + +. +..+ | +|
T Consensus 163 ~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~v 242 (394)
T PLN02644 163 CADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSV 242 (394)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcE
Confidence 00000000 0 00 0111 0 10
Q ss_pred cCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEE
Q psy1120 250 EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEA 325 (883)
Q Consensus 250 ~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~ 325 (883)
...|...++||++++||++.+.|+ +++++|+|++.+.+... ...+ ....+++++|+++|++|+||||+|.
T Consensus 243 t~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~-~~~~-----~~~~a~~~al~~Agi~~~Did~~Ei 316 (394)
T PLN02644 243 TAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPE-LFTT-----APALAIPKALKHAGLEASQVDYYEI 316 (394)
T ss_pred eccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCc-ccch-----hHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 112345569999999999999886 47899999998766421 1111 2246999999999999999999998
Q ss_pred ecCCCCCCcHHHHHHH--HHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 326 HGTGTKVGDPEEVQAL--ENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 326 hgtgt~~gD~~E~~Ai--~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
| |..+...+ .+.|+- ...++++.+.+..+||+.||+|+..++.++.+|+.+
T Consensus 317 ~-------d~f~~~~l~~~e~lg~-~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~ 369 (394)
T PLN02644 317 N-------EAFSVVALANQKLLGL-DPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK 369 (394)
T ss_pred C-------cHHHHHHHHHHHHhCC-CccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc
Confidence 8 44444333 345542 134677888888999999999999999999999764
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.5e-18 Score=191.25 Aligned_cols=240 Identities=17% Similarity=0.237 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++++||+|+|+++++++ .|++|+..+++. . ..++..++..+|+. -|.++
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID----~vv~g~~~~~~~------------------~-~~~a~~va~~~Gl~~~~p~~~ 83 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID----DVIFGQGYPNGE------------------A-PAIGRVAALDAGLPVTVPGMQ 83 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC------------------C-ChHHHHHHHHcCCCCCCceee
Confidence 35889999999999999999887 488886544321 1 12345688888986 48999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh----------------HHH------------HH-hcCC--
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV----------------SLQ------------FA-RLGV-- 238 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~----------------~~~------------~~-~~~~-- 238 (883)
|+++|+|++.|++.|+++|++|++|++||+|+|.+..... +.. +. ...+
T Consensus 84 V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ 163 (404)
T PRK06205 84 LDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIE 163 (404)
T ss_pred hhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCHHH
Confidence 9999999999999999999999999999999987642110 000 00 0000
Q ss_pred ----------C--------------------------------------------CCCCC------------CCC-c---
Q psy1120 239 ----------L--------------------------------------------SPDGR------------CKS-F--- 248 (883)
Q Consensus 239 ----------l--------------------------------------------s~~g~------------~~p-f--- 248 (883)
+ .|+.. .+| |
T Consensus 164 ~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~ 243 (404)
T PRK06205 164 TAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQ 243 (404)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhcCCCcCccC
Confidence 0 00000 001 1
Q ss_pred c-----cCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Q psy1120 249 D-----EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKN 319 (883)
Q Consensus 249 d-----~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~d 319 (883)
+ ...|....+||++++||.+++.|+ +++++|.|++...+.... ...+...+++++|++||++|+|
T Consensus 244 ~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~------~~~~~~~a~~~al~~Agl~~~D 317 (404)
T PRK06205 244 DPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR------MGIGPVPATEKALARAGLTLDD 317 (404)
T ss_pred CCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCcc------ccccHHHHHHHHHHHcCCCHHH
Confidence 0 112333458999999999998886 477999999877654221 1135578999999999999999
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHh-hCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 320 LAWIEAHGTGTKVGDPEEVQALENV-FCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 320 I~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
||++|.|...+. .|...++.. |+.....++.+.+.+..+||+.||+|+..++.++.+|+..
T Consensus 318 id~~ei~d~f~~----~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~ 379 (404)
T PRK06205 318 IDLIELNEAFAA----QVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR 379 (404)
T ss_pred CCEeeeccHHHH----HHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc
Confidence 999998844332 222222222 2221113688888888899999999999999999999864
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.9e-18 Score=188.79 Aligned_cols=240 Identities=17% Similarity=0.217 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHH-CCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Ccee
Q psy1120 112 CRIILEKTYEAVID-AGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSY 188 (883)
Q Consensus 112 ~rl~l~aa~eALed-AG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~ 188 (883)
..|+.+++.+||++ +|+++++++. |++|+...... .+ ..++..++...|+. -|++
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~Id~----v~~G~~~~~~~---------------~g---~~~ar~~~~~~g~~~~~p~~ 83 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAEVED----IYWGCVQQTLE---------------QG---FNIARNAALLAQIPHTSAAV 83 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHHcCE----EEEeccccccc---------------cc---chHHHHHHHHCCCCCCcchh
Confidence 45889999999995 6999999884 88886431100 00 12445556566763 4789
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh-------------------HHHH------HhcC------
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV-------------------SLQF------ARLG------ 237 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~-------------------~~~~------~~~~------ 237 (883)
+|+++|+||+.|++.|+++|++|++|++||||+|.+..... .+.+ .+.+
T Consensus 84 tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~ 163 (385)
T TIGR02445 84 TVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQ 163 (385)
T ss_pred hhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHHhCCCHHHH
Confidence 99999999999999999999999999999999998653210 0000 0000
Q ss_pred ------------------C-------------------CCCCCCCCC-------------ccc------CCCCcccccce
Q psy1120 238 ------------------V-------------------LSPDGRCKS-------------FDE------AANGYCRSEAV 261 (883)
Q Consensus 238 ------------------~-------------------ls~~g~~~p-------------fd~------~~~G~~~gEGa 261 (883)
. +.|+...|+ |+. ..|...++||+
T Consensus 164 d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGA 243 (385)
T TIGR02445 164 DAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGA 243 (385)
T ss_pred HHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCce
Confidence 0 001211111 221 13444569999
Q ss_pred EEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHH
Q psy1120 262 CIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEE 337 (883)
Q Consensus 262 ~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E 337 (883)
+++||++.+.|+ +++++|+|++.+..... .+ ..+...+++++|+++|++|+||||+|.|...+. .|
T Consensus 244 aavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~---~~---~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~----~~ 313 (385)
T TIGR02445 244 SAMLVMSEQRANELGLKPRARIRSMAVAGCDPS---IM---GYGPVPATQKALKRAGLSISDIDVFELNEAFAA----QA 313 (385)
T ss_pred EEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCc---cc---chhHHHHHHHHHHHcCCCHHHcCEEEEccccHH----HH
Confidence 999999998885 57899999998753221 11 124578899999999999999999999977664 45
Q ss_pred HHHHHHh-hCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 338 VQALENV-FCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 338 ~~Ai~~~-f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
+..++.. |++....++.+....-.+||+.||+|+..++.++..|++
T Consensus 314 l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~ 360 (385)
T TIGR02445 314 LPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ 360 (385)
T ss_pred HHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh
Confidence 5555543 222212466666666678999999999988888866654
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-17 Score=188.18 Aligned_cols=240 Identities=17% Similarity=0.213 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Ccee
Q psy1120 112 CRIILEKTYEAVI-DAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSY 188 (883)
Q Consensus 112 ~rl~l~aa~eALe-dAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~ 188 (883)
..|..+++++||+ |+|+++++++. |++|+..... .....++..++...|+. -|++
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id~----vi~g~~~~~~------------------~~g~~~ar~~~~~~Gl~~~~p~~ 85 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEIDD----IIWGCVQQTL------------------EQGFNIARNAALLAGIPHSVPAV 85 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhCe----EEEEeccccc------------------cccccHHHHHHHHcCCCCCCcce
Confidence 4578899999999 58999998874 8888543110 00012345578888885 4789
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh-------------------HHHH------HhcCC-----
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV-------------------SLQF------ARLGV----- 238 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~-------------------~~~~------~~~~~----- 238 (883)
+|+++|+||+.|+..|++.|++|++|++||||+|.+..... .+.+ .+.|.
T Consensus 86 ~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygisre~~ 165 (387)
T PRK08947 86 TVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQ 165 (387)
T ss_pred eeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHHhCCCHHHH
Confidence 99999999999999999999999999999999998754210 0000 00000
Q ss_pred -------------------C-------------------CCCCCCC-------------Cccc------CCCCcccccce
Q psy1120 239 -------------------L-------------------SPDGRCK-------------SFDE------AANGYCRSEAV 261 (883)
Q Consensus 239 -------------------l-------------------s~~g~~~-------------pfd~------~~~G~~~gEGa 261 (883)
+ .++...| -|+. ..|...++||+
T Consensus 166 ~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGA 245 (387)
T PRK08947 166 DAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGA 245 (387)
T ss_pred HHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCce
Confidence 0 0111111 1221 23445679999
Q ss_pred EEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHH
Q psy1120 262 CIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEE 337 (883)
Q Consensus 262 ~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E 337 (883)
+++||.+++.|+ +++++|+|++.+.+... .. ..+...+++++|+++|++|+||||+|.|...|. .|
T Consensus 246 aAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~---~~---~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~----~~ 315 (387)
T PRK08947 246 SAMLVMSESRAKELGLKPRARIRSMAVAGCDPS---IM---GYGPVPATQKALKRAGLSISDIDVFELNEAFAA----QS 315 (387)
T ss_pred EEEEEccHHHHHHCCCCccEEEEEEEEcCcCcc---cc---cccHHHHHHHHHHHcCCCHHHCCEEEecccchH----HH
Confidence 999999998885 47799999998754221 11 112468899999999999999999999977764 56
Q ss_pred HHHHHHh-hCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 338 VQALENV-FCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 338 ~~Ai~~~-f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
+..++.. |++....++.+.+..-.+||+.||+|+..++.++.+|+.
T Consensus 316 l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~ 362 (387)
T PRK08947 316 LPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER 362 (387)
T ss_pred HHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh
Confidence 6665554 333223577777777788999999999999999999976
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.6e-18 Score=190.72 Aligned_cols=239 Identities=16% Similarity=0.153 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeeec
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVD 191 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv~ 191 (883)
..|+.+++.+||+|+|+++++++. |++|+...++... + ... ....+...++.+.|+++|+
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~----vi~g~~~~~~~~~--------------~-~~~-~~~~l~a~~~~~~p~~~V~ 92 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDD----IITGCALQVGENW--------------L-YGG-RHPIFLARLPYNIPAMAVD 92 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCe----eEEEeecCCCccc--------------c-cHH-HHHHHHcCCCCCCcchhhh
Confidence 348899999999999999999984 7777654322100 0 000 1112233334456999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChh-----------hHH---H---HHh-----cCCC----------
Q psy1120 192 SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPY-----------VSL---Q---FAR-----LGVL---------- 239 (883)
Q Consensus 192 tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~-----------~~~---~---~~~-----~~~l---------- 239 (883)
++|+|++.|++.|+++|++|++|++||+|+|.+.... ... . +.. +++.
T Consensus 93 ~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygi 172 (394)
T PRK06445 93 RQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGI 172 (394)
T ss_pred hhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999654211 000 0 000 0000
Q ss_pred C-------------------CCCCC------------------CC-------------------cc-----cCCCCcccc
Q psy1120 240 S-------------------PDGRC------------------KS-------------------FD-----EAANGYCRS 258 (883)
Q Consensus 240 s-------------------~~g~~------------------~p-------------------fd-----~~~~G~~~g 258 (883)
+ ++|.. .| |+ ...|...++
T Consensus 173 tre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~ 252 (394)
T PRK06445 173 KREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLN 252 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCC
Confidence 0 00100 11 11 112234459
Q ss_pred cceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCc
Q psy1120 259 EAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGD 334 (883)
Q Consensus 259 EGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD 334 (883)
||++++||++.+.|+ +++++|+|++...+... +...+...+++++|+++|++|+||||+|.|...+.
T Consensus 253 DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~------~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~--- 323 (394)
T PRK06445 253 SGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPA------IMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAV--- 323 (394)
T ss_pred CceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCc------hhcchHHHHHHHHHHHcCCCHHHcCEEEecccchH---
Confidence 999999999999886 47789999988764321 22346688999999999999999999999987764
Q ss_pred HHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhh
Q psy1120 335 PEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAME 382 (883)
Q Consensus 335 ~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~ 382 (883)
.|+..++..--. .+++.+.+....+||+.||+|+..++.++.+|+
T Consensus 324 -~~l~~~e~lg~~--~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~ 368 (394)
T PRK06445 324 -VVLYAIKELGLD--PETVNIKGGAIAIGHPLGATGARIVGTLARQLQ 368 (394)
T ss_pred -HHHHHHHHhCCC--ccccCCCCCHHHcCCCccchHHHHHHHHHHHHH
Confidence 677777665211 246777777778899999999999999999997
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=188.33 Aligned_cols=236 Identities=16% Similarity=0.187 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Ccee
Q psy1120 112 CRIILEKTYEAVI-DAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSY 188 (883)
Q Consensus 112 ~rl~l~aa~eALe-dAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~ 188 (883)
..|+.+++.++|+ |+|+++++++. |++|+..+.. .....++..++...||. -|++
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id~----v~~G~~~~~~------------------~~~~~~ar~~~~~~Gl~~~vP~~ 84 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVDD----VIYGCANQAG------------------EDNRNVARMSALLAGLPVSVPGT 84 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCE----EEEEeccccc------------------cccchHHHHHHHHcCCCCCCceE
Confidence 3488999999999 68999988874 8888653211 10123455688899993 5999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH-----HH------------------------HH-----
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS-----LQ------------------------FA----- 234 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~-----~~------------------------~~----- 234 (883)
+|+++|+||+.|++.|++.|++|++|++||||+|.+...... .. |.
T Consensus 85 tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg 164 (401)
T PRK09050 85 TINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGVDSMP 164 (401)
T ss_pred EEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccccccHH
Confidence 999999999999999999999999999999999987642200 00 00
Q ss_pred --------hcCC------------------------C-------------------CCCCCCC------------C-ccc
Q psy1120 235 --------RLGV------------------------L-------------------SPDGRCK------------S-FDE 250 (883)
Q Consensus 235 --------~~~~------------------------l-------------------s~~g~~~------------p-fd~ 250 (883)
+.|. + .++...| | |+.
T Consensus 165 ~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l~~l~~~~~~ 244 (401)
T PRK09050 165 ETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEALAKLKPVFRP 244 (401)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCCcccC
Confidence 0000 0 0011111 1 211
Q ss_pred -----CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy1120 251 -----AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLA 321 (883)
Q Consensus 251 -----~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~ 321 (883)
..|....+||++++||++++.|+ +++++|+|++...+... ....+...+++++|++||++|+|||
T Consensus 245 ~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~------~~~~~~~~a~~~al~~Agl~~~DId 318 (401)
T PRK09050 245 DGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPR------IMGIGPAPATRKLLARLGLTIDQFD 318 (401)
T ss_pred CCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCc------cccchHHHHHHHHHHHcCCCHHHCC
Confidence 12334469999999999999885 47899999988654322 1223457899999999999999999
Q ss_pred EEEEecCCCCCCcHHHHHHHH--HhhCCCCCCCeeecccCCC--CCCCcccchhhHHHHHHHHhhc
Q psy1120 322 WIEAHGTGTKVGDPEEVQALE--NVFCPGRTTPLLIGSVKSN--IGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 322 ~ve~hgtgt~~gD~~E~~Ai~--~~f~~~~~~~~~igs~K~~--~GH~~~AsG~~~li~~~l~l~~ 383 (883)
++|.| |..+...+. +.|+-. ....+|+..++. +||+.||+|+..++.++.+|+.
T Consensus 319 ~~ei~-------D~f~~~~l~~~e~lg~~-~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~ 376 (401)
T PRK09050 319 VIELN-------EAFAAQGLAVLRQLGLA-DDDARVNPNGGAIALGHPLGMSGARLVLTALHQLER 376 (401)
T ss_pred ccccC-------cHhHHHHHHHHHHcCCC-CCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHh
Confidence 99976 666665443 345311 123677788886 7999999999999999999976
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=187.92 Aligned_cols=238 Identities=16% Similarity=0.207 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++.+||+|+|+++++++ .|++|+..+..+ + ..++..++..+|+. -|.++
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID----~vi~g~~~~~~~----------------~---~~~~~~~~~~~Gl~~~~p~~~ 83 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE----EVIMGTVLQGGQ----------------G---QIPSRQAARAAGIPWEVQTET 83 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCCC----------------C---CCHHHHHHHHcCCCCCcceee
Confidence 34889999999999999999887 488886543110 0 12334567888983 59999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH-------------HHH---hcC--------CC------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL-------------QFA---RLG--------VL------ 239 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~-------------~~~---~~~--------~l------ 239 (883)
|+++|+|++.|++.|++.|++|++|++||+|+|.+....... .+. ..+ .+
T Consensus 84 V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 163 (393)
T PRK08235 84 VNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGE 163 (393)
T ss_pred hhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHHHH
Confidence 999999999999999999999999999999999765422100 000 000 00
Q ss_pred ---------------------------------------------------CCCCCCC-------------Ccc-----c
Q psy1120 240 ---------------------------------------------------SPDGRCK-------------SFD-----E 250 (883)
Q Consensus 240 ---------------------------------------------------s~~g~~~-------------pfd-----~ 250 (883)
.|+...| .|+ .
T Consensus 164 ~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~g~lt 243 (393)
T PRK08235 164 VAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTIT 243 (393)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCcccCCCcEe
Confidence 0111011 011 0
Q ss_pred CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 251 AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 251 ~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
..|...++||++++||.+.+.|+ +++++|+|++...+... .+ + .....+++++|+++|++|+|||++|.|
T Consensus 244 ~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~--~~--~--~~~~~a~~~al~~agl~~~did~~e~~ 317 (393)
T PRK08235 244 AGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAK--DF--P--RTPGYAINALLEKTGKTVEDIDLFEIN 317 (393)
T ss_pred ccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChh--hh--c--chHHHHHHHHHHHhCCCHHHCCeehhc
Confidence 12333459999999999998885 47889999876543221 11 1 233589999999999999999999988
Q ss_pred cCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 327 GTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 327 gtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
...+. .|... .+.|+- ...|+++.+.+..+||+.||+|+..++.++.+|+.+
T Consensus 318 d~f~~----~~l~~-~e~lg~-~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~ 369 (393)
T PRK08235 318 EAFAA----VALAS-TEIAGI-DPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR 369 (393)
T ss_pred chhHH----HHHHH-HHHhCC-CcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc
Confidence 44432 22222 334532 235788899999999999999999999999999753
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-17 Score=188.05 Aligned_cols=236 Identities=19% Similarity=0.230 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++.+||+|||+++++++ ++++|+...... + ...+..+....|+. .|.++
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID----~vi~g~~~~~~~----------------~---~~~~~~~~~~~gl~~~~~~~~ 83 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVD----EVIMGQVLQAGA----------------G---QNPARQAALKAGLPVEVPALT 83 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----eEEEEEecCCCC----------------C---CcHHHHHHHHcCCCCCCceee
Confidence 45899999999999999999998 477776432100 0 11222355566774 58999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh---------------HHH-H--Hh-cCCCC----------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV---------------SLQ-F--AR-LGVLS---------- 240 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~---------------~~~-~--~~-~~~ls---------- 240 (883)
|+++|+|++.||..|+++|++|++|.+||+|+|.+..... ... + .. .+...
T Consensus 84 v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 163 (393)
T PRK05790 84 INKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAEN 163 (393)
T ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHH
Confidence 9999999999999999999999999999999987532110 000 0 00 00000
Q ss_pred ---------------------------CCCCC----CC----------------------------------ccc-----
Q psy1120 241 ---------------------------PDGRC----KS----------------------------------FDE----- 250 (883)
Q Consensus 241 ---------------------------~~g~~----~p----------------------------------fd~----- 250 (883)
..|.. .| ||.
T Consensus 164 y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt 243 (393)
T PRK05790 164 LAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVT 243 (393)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEe
Confidence 00000 01 110
Q ss_pred CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 251 AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 251 ~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
..|...++||++++||.+.+.|+ +++++|+|++....... +...+...+++++|+++|++|+|||++|.|
T Consensus 244 ~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~------~~~~~~~~a~~~a~~~Agi~~~did~~e~~ 317 (393)
T PRK05790 244 AGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPA------IMGIGPVPAIRKALEKAGWSLADLDLIEIN 317 (393)
T ss_pred CCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCC------ccchhHHHHHHHHHHHcCCCHHHCCEEEeC
Confidence 01445679999999999998886 47789999988653211 122355789999999999999999999988
Q ss_pred cCCCCCCcHHHHHH--HHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 327 GTGTKVGDPEEVQA--LENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 327 gtgt~~gD~~E~~A--i~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
. ..+... ..+.|+- ...++++.+.+..+||+.||+|+..++.++.+|+..
T Consensus 318 d-------~f~~~~l~~~e~lg~-~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~ 369 (393)
T PRK05790 318 E-------AFAAQALAVEKELGL-DPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR 369 (393)
T ss_pred c-------HHHHHHHHHHHHhCC-ChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc
Confidence 4 444433 2334542 134788899999999999999999999999999864
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=7e-17 Score=182.49 Aligned_cols=246 Identities=17% Similarity=0.169 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv 190 (883)
..|+.+++++||+|||+++++|+ +|++|+...++.. + .....++..+|+.+ |+++|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID----~v~vg~~~~~~~~---------------~----~~~~~~a~~lGl~~~~~~~v 84 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDID----AAWFGTHYDEIGS---------------G----KSGTPLSRALRLPNIPVTRV 84 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc---------------c----chhHHHHHHcCCCCCCEEEE
Confidence 57899999999999999999987 4888764321100 0 01234677899976 88899
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh---HH-----HHHhc-CCCC---------------------
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV---SL-----QFARL-GVLS--------------------- 240 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~---~~-----~~~~~-~~ls--------------------- 240 (883)
+++|+|++.||++|+++|++|++|++||+|+|.+..... .. .+... +.+.
T Consensus 85 ~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~yG~t~e 164 (398)
T PRK06157 85 ENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKYGVSRE 164 (398)
T ss_pred ecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999999999997543100 00 00000 0000
Q ss_pred --------------------CCCC------------CCC-cc--cCCCCcccccceEEEEEcccccccc----eeEEEEe
Q psy1120 241 --------------------PDGR------------CKS-FD--EAANGYCRSEAVCIMYLQKSKDAKR----VYARVVH 281 (883)
Q Consensus 241 --------------------~~g~------------~~p-fd--~~~~G~~~gEGa~~vvL~~~~~A~~----i~a~I~g 281 (883)
|+.. .++ ++ ..-|...++||++++||.+.+.|++ ..++|+|
T Consensus 165 ~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g 244 (398)
T PRK06157 165 DLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKA 244 (398)
T ss_pred HHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEE
Confidence 1100 001 00 1124555799999999999888762 6789999
Q ss_pred eeeccCCCCCC---CCCCCCHHHHHHHHHHHHHHcCCC--CCCccEEEEecCCCCCCcHHHHHHHHHh-hCCCC------
Q psy1120 282 AKTNCDGYKEQ---GITYPSGALQQRLLEDFYSECEVD--PKNLAWIEAHGTGTKVGDPEEVQALENV-FCPGR------ 349 (883)
Q Consensus 282 ~~~~~dg~~~~---~~~~p~~~~~~~~i~~al~~agl~--~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~~------ 349 (883)
++...+..... +...........+.+++|++|||+ ++|||++|.|.+.|. .|+..++.. |++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~----~~l~~~e~lGl~~~Ge~~~~~ 320 (398)
T PRK06157 245 LQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSI----TELVTMEDLGLSERGQAWRDV 320 (398)
T ss_pred EEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChH----HHHHHHHHcCCCCCCchHHHH
Confidence 98765431110 111111223467999999999998 799999999988875 566655544 33210
Q ss_pred -------CCCeeecccC--CCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 350 -------TTPLLIGSVK--SNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 350 -------~~~~~igs~K--~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
...++|+..- -..||+.+|+|+..++.++.+|+..
T Consensus 321 ~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 364 (398)
T PRK06157 321 LDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGR 364 (398)
T ss_pred HCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccc
Confidence 1233443333 3459999999999999999999865
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.3e-17 Score=183.02 Aligned_cols=244 Identities=17% Similarity=0.234 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+++.+||+|||+++++++...+|...+.... ...++..+|++| |.++
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--------------------------~~~~~~~lGl~~~~~~~ 75 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--------------------------GQRALYEVGMTGIPIVN 75 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--------------------------hHHHHHHcCCCCCCCcc
Confidence 4679999999999999999988886444443332100 012456789988 9999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hhh---------HHHHH-------h-cCCCC-----------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PYV---------SLQFA-------R-LGVLS----------- 240 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~~---------~~~~~-------~-~~~ls----------- 240 (883)
|+++|+|++.||..|+++|++|++|.+||+|++.+.. +.. +..+. . .+...
T Consensus 76 v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 155 (391)
T PRK08256 76 VNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGRE 155 (391)
T ss_pred cccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999997642 100 00000 0 00100
Q ss_pred --------------------------CCCCC-CCcc--------------cCCCCcccccceEEEEEccccccc----ce
Q psy1120 241 --------------------------PDGRC-KSFD--------------EAANGYCRSEAVCIMYLQKSKDAK----RV 275 (883)
Q Consensus 241 --------------------------~~g~~-~pfd--------------~~~~G~~~gEGa~~vvL~~~~~A~----~i 275 (883)
|.... +|.+ ...|...++||++++||.+.+.|+ ..
T Consensus 156 y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~ 235 (391)
T PRK08256 156 HMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDR 235 (391)
T ss_pred HHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCC
Confidence 10000 0000 113444569999999999998875 36
Q ss_pred eEEEEeeeeccCCCCCCCC-C--CC-CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCC--
Q psy1120 276 YARVVHAKTNCDGYKEQGI-T--YP-SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPG-- 348 (883)
Q Consensus 276 ~a~I~g~~~~~dg~~~~~~-~--~p-~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~-- 348 (883)
+++|+|.+...+....... . .. ...+...+.+++|+++|++++|||++|+|.+.|. .|...++.. |++.
T Consensus 236 ~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~----~~l~~le~lg~~~~Ge 311 (391)
T PRK08256 236 AVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSA----NELLTYEALGLCPEGE 311 (391)
T ss_pred CEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcH----HHHHHHHHcCCCCCCc
Confidence 7899998876654221111 0 01 1234568999999999999999999999998875 566666655 3321
Q ss_pred --------C---CCCeeeccc--CCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 349 --------R---TTPLLIGSV--KSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 349 --------~---~~~~~igs~--K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
. ...++|+.. --..||+.||+|+..++.++++|+.+
T Consensus 312 ~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~ 360 (391)
T PRK08256 312 AEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGT 360 (391)
T ss_pred hHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCC
Confidence 0 123344333 33359999999999999999999864
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.4e-17 Score=184.40 Aligned_cols=237 Identities=16% Similarity=0.190 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--ceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~t 189 (883)
..|+.+++.+||+|+|+++++++ +|++|+..... .. ..++..++..+|+.. |.++
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID----~vi~g~~~~~~------------------~~-~~~a~~~~~~~Gl~~~~p~~~ 83 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQ----EVIMGNVIQAG------------------VG-QNPAGQAAYHAGLPFGVTKYT 83 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCC------------------cc-CcHHHHHHHHCCCCCCCccee
Confidence 45899999999999999999998 48888643211 00 112456788899964 9999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChh---------h---H-------H-HHHhcCCCC---------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPY---------V---S-------L-QFARLGVLS--------- 240 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~---------~---~-------~-~~~~~~~ls--------- 240 (883)
|+++|+||+.|+..|+++|++|++|++||+|+|.+.... . . . .+...++..
T Consensus 84 v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal 163 (388)
T PRK06366 84 VNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGV 163 (388)
T ss_pred eechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccHHH
Confidence 999999999999999999999999999999998765210 0 0 0 000011000
Q ss_pred ------------------------------CC-CCCC----Cc------------------------c-----cCCCCcc
Q psy1120 241 ------------------------------PD-GRCK----SF------------------------D-----EAANGYC 256 (883)
Q Consensus 241 ------------------------------~~-g~~~----pf------------------------d-----~~~~G~~ 256 (883)
|+ |+.+ || + ...|...
T Consensus 164 ~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g~lt~~d~s~ 243 (388)
T PRK06366 164 SAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNGILTAGNSAQ 243 (388)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCCCEehhhcCC
Confidence 11 1110 11 1 0122333
Q ss_pred cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~ 332 (883)
.+|||+++||.+++.|+ ++.++|+|++....... .+. .+...+++++|+++|++|+|||++|.|...|.
T Consensus 244 ~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~--~~~----~~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~- 316 (388)
T PRK06366 244 LSDGGSALVMASEKAINEYGLKPIARITGYESASLDPL--DFV----EAPIPATRKLLEKQNKSIDYYDLVEHNEAFSI- 316 (388)
T ss_pred cccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHH--Hhc----ccHHHHHHHHHHHcCCCHHHcceeeccchhHH-
Confidence 59999999999998886 36679999987755321 121 11268999999999999999999999977764
Q ss_pred CcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 333 gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
.|+..++.. +-.. +++.+...--.+||+.||+|+..++.++.+|+.
T Consensus 317 ---~~l~~le~l-gl~g-~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~ 362 (388)
T PRK06366 317 ---ASIIVRDQL-KIDN-ERFNVNGGAVAIGHPIGNSGSRIIVTLINALKT 362 (388)
T ss_pred ---HHHHHHHHh-CCCC-CccCCCCchhhhCCCcCCCHHHHHHHHHHHHHh
Confidence 555555543 2112 255555544556999999999999999999975
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.3e-17 Score=181.67 Aligned_cols=239 Identities=14% Similarity=0.158 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++.++|+|+|+++++++. |++|+..... .....++..++...||. -|+++
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id~----v~~G~~~~~~------------------~q~~~~ar~~~l~~Gl~~~~p~~t 84 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVEQ----VIGGCVTQAG------------------EQSNNITRTAWLHAGLPYHVGATT 84 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEEeccccc------------------cccchHHHHHHHhCCCCCCCceEE
Confidence 458899999999999999998874 7888643110 00012344556668885 48999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHH------------HH---------------hcCC----
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQ------------FA---------------RLGV---- 238 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~------------~~---------------~~~~---- 238 (883)
|+++|+||+.|++.|++.|++|++|++||||+|.+........ +. +.|.
T Consensus 85 V~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~ 164 (387)
T PRK07850 85 IDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITRED 164 (387)
T ss_pred EecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHH
Confidence 9999999999999999999999999999999998764210000 00 0000
Q ss_pred --------------------CC--------C----C----CC---------------------CCCcc----cCCCCccc
Q psy1120 239 --------------------LS--------P----D----GR---------------------CKSFD----EAANGYCR 257 (883)
Q Consensus 239 --------------------ls--------~----~----g~---------------------~~pfd----~~~~G~~~ 257 (883)
+. + + +. ...|. ...|...+
T Consensus 165 ~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~t~~~~~~~ 244 (387)
T PRK07850 165 VDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQI 244 (387)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCccchhcCCc
Confidence 00 0 0 00 01221 11244456
Q ss_pred ccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCC
Q psy1120 258 SEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333 (883)
Q Consensus 258 gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~g 333 (883)
+||++++||.+.+.|+ ++.++|+|++...+... . ...+...+++++|+++|++|+|||++|.|...|.
T Consensus 245 sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~---~---~~~~~~~a~~~al~~agl~~~did~~ei~d~F~~-- 316 (387)
T PRK07850 245 SDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPY---Y---HLDGPVQATAKVLEKAGMKIGDIDLVEINEAFAS-- 316 (387)
T ss_pred CCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCch---h---hcchHHHHHHHHHHHcCCCHHHcCeeeecccchH--
Confidence 8999999999998886 46799999886433211 1 1234578999999999999999999999977764
Q ss_pred cHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 334 D~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
.|+..++ .|+- ...|+.+.+..-.+||+.+|+|+..++.++.+|+.+
T Consensus 317 --~~l~~~e-~lg~-~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~ 363 (387)
T PRK07850 317 --VVLSWAQ-VHEP-DMDKVNVNGGAIALGHPVGSTGARLITTALHELERT 363 (387)
T ss_pred --HHHHHHH-HcCC-CCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc
Confidence 4444443 3432 224777777777789999999999999999999753
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-16 Score=177.82 Aligned_cols=248 Identities=14% Similarity=0.129 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~t 189 (883)
...|+.+++++||+|||+++++++ ++++++. .+.. .+ ....+..++..+|+. .|.+.
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID----~~i~~~~-~~~~---------------~~--~~~~a~~l~~~lG~~~~~~~~ 86 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDID----CVVIGSA-PDAF---------------DG--VHMKGEYLSHGSGGIRKPVSR 86 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEecc-CCcc---------------cc--cccHHHHHHHHcCCCCCCeEE
Confidence 356999999999999999999887 4777642 1110 01 123455688888886 59999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChh----hHH------HHH-hcCC-------------CC-----
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPY----VSL------QFA-RLGV-------------LS----- 240 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~----~~~------~~~-~~~~-------------ls----- 240 (883)
|+++|+|+..|+..|+++|++|++|.|||+|++.+.... ... .+. ..+. +.
T Consensus 87 V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~ 166 (392)
T PRK06065 87 VYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIK 166 (392)
T ss_pred EecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcC
Confidence 999999999999999999999999999999988742210 000 000 0000 00
Q ss_pred ------------CCCCCCCccc---------------------CCCCcccccceEEEEEcccccccc---eeEEEEeeee
Q psy1120 241 ------------PDGRCKSFDE---------------------AANGYCRSEAVCIMYLQKSKDAKR---VYARVVHAKT 284 (883)
Q Consensus 241 ------------~~g~~~pfd~---------------------~~~G~~~gEGa~~vvL~~~~~A~~---i~a~I~g~~~ 284 (883)
..+...|+.. .-|....+||++++||.+.+.|++ ....|+|++.
T Consensus 167 ~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v~I~g~~~ 246 (392)
T PRK06065 167 KEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTPVWVEGVGW 246 (392)
T ss_pred HHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEE
Confidence 0001111110 024445799999999999988863 3355888877
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCC--CCccEEEEecCCCCCCcHHHHHHHHHh-hCC----------CC--
Q psy1120 285 NCDGYKEQGITYPSGALQQRLLEDFYSECEVDP--KNLAWIEAHGTGTKVGDPEEVQALENV-FCP----------GR-- 349 (883)
Q Consensus 285 ~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~--~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~----------~~-- 349 (883)
..+.............+...+.+++|+++|+++ +|||++|.|.+.|. .|+..++.. |++ +.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~----~~l~~~E~lG~~~~G~~~~~~~~g~~~ 322 (392)
T PRK06065 247 TLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDY----KELHHLEGLQLAKRGEAPKLLKEGVFD 322 (392)
T ss_pred ecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChH----HHHHHHHHcCCCCCCcHHHHHHCCCcc
Confidence 655422111111233445689999999999985 99999999999885 555555443 111 11
Q ss_pred -CC--CeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 350 -TT--PLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 350 -~~--~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
.. |+.....--..||+.+|+|+..++.++.+|+..
T Consensus 323 ~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 360 (392)
T PRK06065 323 IDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGT 360 (392)
T ss_pred CCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhcc
Confidence 11 333333333359999999999999999999754
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-16 Score=180.23 Aligned_cols=247 Identities=17% Similarity=0.176 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv 190 (883)
..|+.+++.+||+|||+++++++ +|++|.....+ .+ .+.....++..+|+++ |+++|
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID----~vv~~~~~~~~----------------~g--~~~~~~~~~~~lGl~~~~~~~v 95 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADID----GSVASYFSDHF----------------QR--QLLAGIMVQDYLGLVPKPSKRI 95 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEecccccc----------------cc--cchhhHHHHHhcCCCCCceEEE
Confidence 35899999999999999999887 36665422110 01 1222234678899975 89999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH--HHH---------h-cCCCC-------------CC---
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL--QFA---------R-LGVLS-------------PD--- 242 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~--~~~---------~-~~~ls-------------~~--- 242 (883)
+++|+|++.||..|++.|++|+||+|||+|++.+.+..... .+. . .+... ..
T Consensus 96 ~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~~yG~t 175 (430)
T PRK06365 96 EGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMYEFGTT 175 (430)
T ss_pred eCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999765422100 000 0 01000 00
Q ss_pred --------------CCCCCccc---------------------CCCCcccccceEEEEEcccccccc---eeEEEEeeee
Q psy1120 243 --------------GRCKSFDE---------------------AANGYCRSEAVCIMYLQKSKDAKR---VYARVVHAKT 284 (883)
Q Consensus 243 --------------g~~~pfd~---------------------~~~G~~~gEGa~~vvL~~~~~A~~---i~a~I~g~~~ 284 (883)
....||.. ..|...++||++++||.+.+.|++ ....|++++.
T Consensus 176 ~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv~i~g~g~ 255 (430)
T PRK06365 176 VEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKPVLIKAIGT 255 (430)
T ss_pred HHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCCeEEEEEEE
Confidence 00111111 123444689999999999988863 3345566655
Q ss_pred ccCCCCCCCC----------------------CCCCHHHHHHHHHHHHHHcCCC--CCCccEEEEecCCCCCCcHHHHHH
Q psy1120 285 NCDGYKEQGI----------------------TYPSGALQQRLLEDFYSECEVD--PKNLAWIEAHGTGTKVGDPEEVQA 340 (883)
Q Consensus 285 ~~dg~~~~~~----------------------~~p~~~~~~~~i~~al~~agl~--~~dI~~ve~hgtgt~~gD~~E~~A 340 (883)
.+++...... ..........+++++|+++|++ ++|||++|.|.+.|. .|...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~----~~l~~ 331 (430)
T PRK06365 256 GSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTS----SEIQT 331 (430)
T ss_pred eccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcH----HHHHH
Confidence 4443211000 0112334568999999999997 799999999988875 56655
Q ss_pred HHHh-hCCCC-------------CCCeeeccc--CCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 341 LENV-FCPGR-------------TTPLLIGSV--KSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 341 i~~~-f~~~~-------------~~~~~igs~--K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
++.. |++.. ..+++|+.. --..||+.||+|+..++.++.+|+..
T Consensus 332 lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~ 391 (430)
T PRK06365 332 YEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGR 391 (430)
T ss_pred HHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcc
Confidence 5544 22210 122333333 33359999999999999999999865
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-16 Score=178.35 Aligned_cols=245 Identities=16% Similarity=0.192 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCC--CCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHH-------HhhC
Q psy1120 112 CRIILEKTYEAVIDAGINPKS--LRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVS-------YWLG 182 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~--~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is-------~~~~ 182 (883)
..|+.+++++||+|||+++++ ++ +|++|+..+... .+ . ..++..++ ..+|
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID----~vi~G~~~~~~~---------------~~-~-~~~a~~~~~~~gl~~~~~g 107 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVD----KVVVGNFLGELF---------------SS-Q-GHLGPAAVGSLGQSGASNA 107 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcC----EEEEEecccccc---------------cc-c-cchHHHHHHhccCcccccc
Confidence 358899999999999999988 87 477776432210 00 0 11122233 4456
Q ss_pred CC-CceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh--------------------------HHH---
Q psy1120 183 VN-GPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV--------------------------SLQ--- 232 (883)
Q Consensus 183 l~-Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~--------------------------~~~--- 232 (883)
+. -|+++|+++|+||+.||+.|+++|++|++|++||+|+|.+..... ++.
T Consensus 108 l~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 187 (438)
T PTZ00455 108 LLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTFPCLFAKRM 187 (438)
T ss_pred cCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcchHHHHHHHH
Confidence 64 499999999999999999999999999999999999997543110 000
Q ss_pred --HHhcCCCC------------------CCCC--CCCc--cc----------------------CCCCcccccceEEEEE
Q psy1120 233 --FARLGVLS------------------PDGR--CKSF--DE----------------------AANGYCRSEAVCIMYL 266 (883)
Q Consensus 233 --~~~~~~ls------------------~~g~--~~pf--d~----------------------~~~G~~~gEGa~~vvL 266 (883)
+.+.+-++ |.-. -++. +. ..|....+||++++||
T Consensus 188 ~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~sDGAaA~vl 267 (438)
T PTZ00455 188 KYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVSDGGAGLVL 267 (438)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCccccceEEEE
Confidence 11111011 1101 0111 11 1233345899999999
Q ss_pred cccccccc----e----eEEEEeeeeccCCCC--CCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHH
Q psy1120 267 QKSKDAKR----V----YARVVHAKTNCDGYK--EQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPE 336 (883)
Q Consensus 267 ~~~~~A~~----i----~a~I~g~~~~~dg~~--~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~ 336 (883)
.+.+.|++ + .++|+|++...+... ...++. .... ..+++++|+++|++|+|||++|.|...|. .
T Consensus 268 ~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~-~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~----~ 341 (438)
T PTZ00455 268 ASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATR-MFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTI----A 341 (438)
T ss_pred ecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCcccccc-chHH-HHHHHHHHHHcCCCHHHCcEeeecccChH----H
Confidence 99988863 2 589999988765321 001111 1223 78999999999999999999999988875 5
Q ss_pred HHHHHHHh-hCCC---------------CCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 337 EVQALENV-FCPG---------------RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 337 E~~Ai~~~-f~~~---------------~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
|+..++.. |+.. ...|+.+...--.+||+.||+|+..++.++.+|+.
T Consensus 342 ~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg 404 (438)
T PTZ00455 342 ELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKG 404 (438)
T ss_pred HHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhh
Confidence 66555544 2221 11345554444456999999999999999999985
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.3e-16 Score=177.65 Aligned_cols=241 Identities=14% Similarity=0.153 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+++.+||+|||+++++++ ++++++.... .....++..+|+++ |.+.
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID----~iv~~~~~~~-----------------------~~~~~la~~lGl~~~~~~~ 80 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVD----GLFTASPDDA-----------------------LWGLSVAEYLGIRPRFVDG 80 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCCC-----------------------CcHHHHHHHcCCCCeeecc
Confidence 357999999999999999998887 4677642100 11235788889965 7788
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEe-ccccccChh------hHHHHHh-cCCCC---------------------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVG-GCNLCLHPY------VSLQFAR-LGVLS--------------------- 240 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvg-G~~~~~~~~------~~~~~~~-~~~ls--------------------- 240 (883)
++++|+|++.||+.|++.|++|.+|.|||+ |.+.+.... ....|.. .+...
T Consensus 81 ~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e 160 (384)
T PRK06158 81 TMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTRE 160 (384)
T ss_pred ccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHH
Confidence 999999999999999999999999999975 665432100 0000000 01000
Q ss_pred ----------------CCC----------------CCCCcccCCCCcccccceEEEEEcccccccc---eeEEEEeeeec
Q psy1120 241 ----------------PDG----------------RCKSFDEAANGYCRSEAVCIMYLQKSKDAKR---VYARVVHAKTN 285 (883)
Q Consensus 241 ----------------~~g----------------~~~pfd~~~~G~~~gEGa~~vvL~~~~~A~~---i~a~I~g~~~~ 285 (883)
|.- .+.|+.. .|...++||++++||.+.+.|++ ....|+|++..
T Consensus 161 ~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~-~d~~~~~DGAaAvVL~s~e~A~~l~~~~v~i~g~~~~ 239 (384)
T PRK06158 161 QLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRADRARDLPRPPVYVLGAAAA 239 (384)
T ss_pred HHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCch-hhcCCccCCeEEEEEecHHHHhhcCCCcEEEEEEEEe
Confidence 100 1122221 46678899999999999988863 34668887766
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCCC-------------CC
Q psy1120 286 CDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPGR-------------TT 351 (883)
Q Consensus 286 ~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~~-------------~~ 351 (883)
++..............+..++++||++||++|+|||++|.|.+.|. .|...++.. |++.. ..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~----~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G 315 (384)
T PRK06158 240 TWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTI----NTILFLEDLGFCAKGEGGAFVEGGRIAPGG 315 (384)
T ss_pred cCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchH----HHHHHHHHcCCCCCCcHHHHHHCCCCccCC
Confidence 5543211111122455678999999999999999999999999886 566666554 32210 11
Q ss_pred CeeecccCCC--CCCCcccchhhHHHHHHHHhhcC
Q psy1120 352 PLLIGSVKSN--IGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 352 ~~~igs~K~~--~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
.++|+..-+. .||+ ||+|+..++.++++|+..
T Consensus 316 ~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~ 349 (384)
T PRK06158 316 RLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGE 349 (384)
T ss_pred CccccCCChhhcCCCC-chhhHHHHHHHHHHHcCC
Confidence 2344333232 5999 999999999999999864
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-16 Score=181.37 Aligned_cols=240 Identities=17% Similarity=0.222 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-C-ceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-G-PSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-G-ps~t 189 (883)
..|+.+++++||+|+|+++++++. |++|+..+. +.. ..++..++...||. + |.++
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id~----vi~G~~~~~------------------~~~-~~~ar~~~l~aGl~~~~p~~~ 88 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIEQ----LVFGQVVQM------------------PEA-PNIAREIVLGTGMNVHTDAYS 88 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEEeccCc------------------Ccc-chHHHHHHHhCCCCCCCchhh
Confidence 458899999999999999998874 788864321 000 22555666667886 3 9999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hhhHH----------------H--H---Hh------c-----
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PYVSL----------------Q--F---AR------L----- 236 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~~~~----------------~--~---~~------~----- 236 (883)
|+++|+||+.|+++|+++|++|++|++||||+|.+.. |.... . + .. .
T Consensus 89 V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
T TIGR02446 89 VTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPA 168 (430)
T ss_pred hhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhcccCcc
Confidence 9999999999999999999999999999999999753 11000 0 0 00 0
Q ss_pred ------CC-C-------------C---------------C----CCCC---------CC---------------------
Q psy1120 237 ------GV-L-------------S---------------P----DGRC---------KS--------------------- 247 (883)
Q Consensus 237 ------~~-l-------------s---------------~----~g~~---------~p--------------------- 247 (883)
+. + + . +|+. .|
T Consensus 169 ~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r~~~t~e~~~ 248 (430)
T TIGR02446 169 VAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIRHNSTLAGYA 248 (430)
T ss_pred cccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCCCCCCHHHHh
Confidence 00 0 0 0 0000 01
Q ss_pred -----cc------cCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy1120 248 -----FD------EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSE 312 (883)
Q Consensus 248 -----fd------~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~ 312 (883)
|+ ...|....+||++++||.+.+.|+ ++.++|++++........ .+ + .....+++++|++
T Consensus 249 ~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~-~~--~--~~~~~a~~~al~~ 323 (430)
T TIGR02446 249 KLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQ-DM--L--MGPSYATPLALQR 323 (430)
T ss_pred cCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchH-hh--c--ccHHHHHHHHHHH
Confidence 11 022344459999999999988876 466889988765322110 11 1 1224789999999
Q ss_pred cCCCCCCccEEEEecCCCCCCcHHHHHHHHHh----hCCC-----------CCCCeeecccCCCCCCCcccchhhHHHHH
Q psy1120 313 CEVDPKNLAWIEAHGTGTKVGDPEEVQALENV----FCPG-----------RTTPLLIGSVKSNIGHSEPASGVCSVTKV 377 (883)
Q Consensus 313 agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~----f~~~-----------~~~~~~igs~K~~~GH~~~AsG~~~li~~ 377 (883)
||++++|||++|.|...|. .|+..++.. |... ...|+.....--..||+.||+|+..++.+
T Consensus 324 Agl~~~Did~~Ei~daFa~----~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v~e~ 399 (430)
T TIGR02446 324 AGLALSDLTLIDMHEAFAA----QTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQT 399 (430)
T ss_pred cCCCHHHCCEEEeccccHH----HHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHH
Confidence 9999999999999988875 566555554 3211 01144443333446999999999999999
Q ss_pred HHHhhc
Q psy1120 378 ILAMEN 383 (883)
Q Consensus 378 ~l~l~~ 383 (883)
+.+|+.
T Consensus 400 ~~qL~g 405 (430)
T TIGR02446 400 LRELKR 405 (430)
T ss_pred HHHHhh
Confidence 999975
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-16 Score=177.48 Aligned_cols=220 Identities=14% Similarity=0.267 Sum_probs=151.1
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceee
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYT 189 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~t 189 (883)
....|+.+++.+||++||+++++++ .+++++...++. . ...+..++..+|+++++++
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id----~li~~~~~~~~~------------------~-p~~a~~v~~~Lgl~~~~~~ 150 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID----AVIVACSNMQRA------------------Y-PAMAIEIQQALGIEGFAFD 150 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------C-cHHHHHHHHhcCCCCcEEE
Confidence 3457999999999999999988886 477776433211 0 1135678999999999999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
++.+|+|++.||..|++.|++|.+|.|||+|+|.+... . -|+....++++||||+++||++.
T Consensus 151 v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-------~~~d~~~~~lfGDgAaA~vL~~~ 212 (372)
T PRK07515 151 MNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGH-----------L-------NFRDRDSHFIFGDVATAVIVERA 212 (372)
T ss_pred ecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-----------c-------cccCCCCCEEecCccEEEEEeec
Confidence 99999999999999999999999999999999973311 0 12223467999999999999987
Q ss_pred cccc-----ceeEEEEeeeec-----cCCC----CCCCCCCC------CHH--------HHHHHHHHHHHHcCCCCCCcc
Q psy1120 270 KDAK-----RVYARVVHAKTN-----CDGY----KEQGITYP------SGA--------LQQRLLEDFYSECEVDPKNLA 321 (883)
Q Consensus 270 ~~A~-----~i~a~I~g~~~~-----~dg~----~~~~~~~p------~~~--------~~~~~i~~al~~agl~~~dI~ 321 (883)
+.+. ++++........ ..|. .......+ ++. ...++|+++|+++|++++|||
T Consensus 213 ~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId 292 (372)
T PRK07515 213 DTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVK 292 (372)
T ss_pred cccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 6653 244332111000 0110 00011111 222 256889999999999999999
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhhCCCC-CCCeeecccCCCCCCCcccchhhHHHH
Q psy1120 322 WIEAHGTGTKVGDPEEVQALENVFCPGR-TTPLLIGSVKSNIGHSEPASGVCSVTK 376 (883)
Q Consensus 322 ~ve~hgtgt~~gD~~E~~Ai~~~f~~~~-~~~~~igs~K~~~GH~~~AsG~~~li~ 376 (883)
||.+|.+++...|.+ ++++|+... ....+ .+-..+||+.+|+=...|-.
T Consensus 293 ~~~~Hq~~~~~~d~~----~~~llg~~~~~~~~~--~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 293 RFWLHQANINMNQLI----GKKVLGRDATPEEAP--VILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred EEEECCCCHHHHHHH----HHHhccCCCChhhce--EeHHhcCCchhhHHHHHHHH
Confidence 999999999988865 334454211 11112 12367899999886554443
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.4e-17 Score=182.82 Aligned_cols=240 Identities=17% Similarity=0.201 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++++||+|+|+++++++ .|++|+..+.. .. ..++..++...||. -|+++
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID----~vi~G~~~~~~------------------~~-~~~ar~~a~~aGl~~~~P~~t 86 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE----QLVFGQVVQMP------------------EA-PNIAREIVLGTGMNVHTDAYS 86 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCCC------------------Cc-cHHHHHHHHHCCCCCCCccee
Confidence 45889999999999999999887 48888643210 00 22455688999995 59999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH-------------------H---HHh----------cC
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL-------------------Q---FAR----------LG 237 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~-------------------~---~~~----------~~ 237 (883)
|+++|+||+.|++.|++.|++|++|++||||+|.+....... . +.. ..
T Consensus 87 V~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (428)
T PRK08963 87 VSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPA 166 (428)
T ss_pred ehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccCcc
Confidence 999999999999999999999999999999999876432100 0 000 00
Q ss_pred C---------------------CC-------------------CCCCC---------CCcc-------------------
Q psy1120 238 V---------------------LS-------------------PDGRC---------KSFD------------------- 249 (883)
Q Consensus 238 ~---------------------ls-------------------~~g~~---------~pfd------------------- 249 (883)
+ ++ .+|.- .|+.
T Consensus 167 ~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r~~~t~e~~~ 246 (428)
T PRK08963 167 VAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDSTLEDYA 246 (428)
T ss_pred cccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCCCCCCHHHHh
Confidence 0 00 00000 0110
Q ss_pred -------------cCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy1120 250 -------------EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSE 312 (883)
Q Consensus 250 -------------~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~ 312 (883)
...|....+||++++||.+.+.|+ ++.+.|.+++....... .. ...+...+++++|++
T Consensus 247 ~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~-~~----~~~~~~~a~~~al~~ 321 (428)
T PRK08963 247 KLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVW-QD----MLLGPAYATPLALER 321 (428)
T ss_pred cCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCch-hh----hhhHHHHHHHHHHHH
Confidence 011223359999999999998886 47789999876542110 00 123345789999999
Q ss_pred cCCCCCCccEEEEecCCCCCCcHHHHHHHHHh----h-----CCC------CCCCeeecccCCCCCCCcccchhhHHHHH
Q psy1120 313 CEVDPKNLAWIEAHGTGTKVGDPEEVQALENV----F-----CPG------RTTPLLIGSVKSNIGHSEPASGVCSVTKV 377 (883)
Q Consensus 313 agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~----f-----~~~------~~~~~~igs~K~~~GH~~~AsG~~~li~~ 377 (883)
+|++++|||++|.|...+. .|+..++.. | +.. ...|+.+...--..||+.||+|+..++.+
T Consensus 322 AGl~~~DiD~~Ei~d~Fa~----~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~ 397 (428)
T PRK08963 322 AGLTLADLTLIDMHEAFAA----QTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQT 397 (428)
T ss_pred cCCCHHHCCEEEEccccHH----HHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHH
Confidence 9999999999999988874 444444433 1 100 11244444444446999999999999999
Q ss_pred HHHhhc
Q psy1120 378 ILAMEN 383 (883)
Q Consensus 378 ~l~l~~ 383 (883)
+.+|+.
T Consensus 398 ~~qLrg 403 (428)
T PRK08963 398 LHELRR 403 (428)
T ss_pred HHHHhh
Confidence 999975
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.6e-16 Score=176.50 Aligned_cols=238 Identities=16% Similarity=0.144 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
..|+.+++.+||+|+|+++++++. |++|+..... .....++..+...-|| .-|.++
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id~----vi~G~~~~~~------------------~~~~~~ar~~~l~~gl~~~vP~~t 84 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIED----VIMGCVSQVG------------------EQATNVARNAVLASKLPESVPGTS 84 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEEeccccc------------------cccccHHHHHHHHcCCCCCCceEE
Confidence 458899999999999999999884 7787643110 0000122222223344 569999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH--H--------------HHHhc-C--C------------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS--L--------------QFARL-G--V------------ 238 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~--~--------------~~~~~-~--~------------ 238 (883)
|+++|+||+.|+..|++.|++|++|++||||+|.+...... . .+... . .
T Consensus 85 V~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae~~a~ 164 (390)
T PRK06504 85 IDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAK 164 (390)
T ss_pred EechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999987542110 0 00000 0 0
Q ss_pred ---CC-------------------CCC-------------------------------------CCCCcc-----cCCCC
Q psy1120 239 ---LS-------------------PDG-------------------------------------RCKSFD-----EAANG 254 (883)
Q Consensus 239 ---ls-------------------~~g-------------------------------------~~~pfd-----~~~~G 254 (883)
++ ..| ..+|.. ...|.
T Consensus 165 ~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~g~lt~~n~ 244 (390)
T PRK06504 165 KYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEGGRLTAATA 244 (390)
T ss_pred HhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCCCCCcCccC
Confidence 00 000 001111 01233
Q ss_pred cccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC
Q psy1120 255 YCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330 (883)
Q Consensus 255 ~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt 330 (883)
...+||++++||.+.+.|+ ++.+.|++++...+... . ...+...+++++|+++|++|+|||++|.|...|
T Consensus 245 s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~----~--~~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa 318 (390)
T PRK06504 245 SQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPV----I--MLEAPLPATERALKKAGMKIDDIDLYEVNEAFA 318 (390)
T ss_pred CCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCch----h--hhccHHHHHHHHHHHcCCCHHHCCEEEecccch
Confidence 4468999999999998886 34556777765444211 1 122445799999999999999999999998877
Q ss_pred CCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 331 ~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
. .|...++.. +- ..+|+.+....-.+||+.||+|+..+..++.+|++
T Consensus 319 ~----~~l~~~e~l-G~-~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~ 365 (390)
T PRK06504 319 S----VPLAWLKAT-GA-DPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQ 365 (390)
T ss_pred H----HHHHHHHHh-CC-CCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHh
Confidence 5 455555544 21 12367777777778999999999999999999975
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.6e-16 Score=175.15 Aligned_cols=245 Identities=17% Similarity=0.164 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv 190 (883)
..|+.+++.+||+|||+++++++ ++++++. +++.. +. ...+..++..+|+++ |.+.|
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID----~iv~~~~-~~~~~---------------~~--~~~~~~va~~LGl~~~~~~~v 82 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDID----AVVVGKA-PDFFE---------------GV--MMPELFLADALGATGKPLIRV 82 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecc-ccccc---------------cc--cCchHHHHHhcCCCCCceEEE
Confidence 45899999999999999999887 4777652 22100 00 112246889999975 88999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh--------------------HHH------HHhcCCC-----
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV--------------------SLQ------FARLGVL----- 239 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~--------------------~~~------~~~~~~l----- 239 (883)
+++|+|+..+++.|++.|++|++|.|||.|++.+.+... .+. +.+.|..
T Consensus 83 ~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la 162 (386)
T PRK08313 83 HTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGA 162 (386)
T ss_pred eccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHH
Confidence 999999999999999999999999999999986533100 000 0111111
Q ss_pred ------------CCCCCC-CC-cc--------------cCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccC
Q psy1120 240 ------------SPDGRC-KS-FD--------------EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCD 287 (883)
Q Consensus 240 ------------s~~g~~-~p-fd--------------~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~d 287 (883)
.|.-.. ++ ++ ..-|....+||++++||.+.+.|+ +..++|+|++..++
T Consensus 163 ~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~ 242 (386)
T PRK08313 163 MVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTE 242 (386)
T ss_pred HHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEec
Confidence 011001 11 21 113445569999999999988775 35678999987765
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHcCCC--CCCccEEEEecCCCCCCcHHHHHHHHHh-hCCC-------------CCC
Q psy1120 288 GYKEQGITYPSGALQQRLLEDFYSECEVD--PKNLAWIEAHGTGTKVGDPEEVQALENV-FCPG-------------RTT 351 (883)
Q Consensus 288 g~~~~~~~~p~~~~~~~~i~~al~~agl~--~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~-------------~~~ 351 (883)
.............+...+.+++|++||++ ++|||++|.|.+.|. .|...++.. |+.. ...
T Consensus 243 ~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~----~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G 318 (386)
T PRK08313 243 PLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSW----FEPMWLENLGFAPEGEGWKLTEAGETAIGG 318 (386)
T ss_pred CcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChH----HHHHHHHHcCCCCCCchHHHHHCCCcCCCC
Confidence 43211112223456778999999999997 699999999999886 566555544 2221 012
Q ss_pred Ceee---cccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 352 PLLI---GSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 352 ~~~i---gs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
+++| |..++ ||+.||+|+..++.++.+|+..
T Consensus 319 ~~pvN~~GG~l~--g~p~gatG~~~~~e~~~qlrG~ 352 (386)
T PRK08313 319 RLPVNPSGGVLS--SNPIGASGMIRFAEAALQVMGK 352 (386)
T ss_pred CccccCCCcccc--cCCCcHHHHHHHHHHHHHhccc
Confidence 3444 34444 9999999999999999999864
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-16 Score=175.18 Aligned_cols=249 Identities=19% Similarity=0.174 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv 190 (883)
..|+.+++.+||+|||+++++++ +|++|+..+++.. . ....... +. ....++.| |+++|
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID----~vi~g~~~~~~~~---------~----~~~~~~~-~~--~~~~~~~g~~~~~v 86 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIE----VVHVGNFFGELFA---------G----QGHLGAM-PA--TVHPALWGVPASRH 86 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc---------c----ccccchH-HH--HHhhcCCCCceeec
Confidence 46899999999999999999998 5788865443210 0 0000011 11 12234433 89999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH-----H----HHHhcCC----C------------------
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS-----L----QFARLGV----L------------------ 239 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~-----~----~~~~~~~----l------------------ 239 (883)
+++|+|++.||+.|+.+|++|+||.+||+|++.+...... . .+...++ .
T Consensus 87 ~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~ 166 (403)
T PRK06289 87 EAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGL 166 (403)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999875432110 0 0000000 0
Q ss_pred C------------------CCCCCC------Ccc--------------cCCCCcccccceEEEEEccccccc-----cee
Q psy1120 240 S------------------PDGRCK------SFD--------------EAANGYCRSEAVCIMYLQKSKDAK-----RVY 276 (883)
Q Consensus 240 s------------------~~g~~~------pfd--------------~~~~G~~~gEGa~~vvL~~~~~A~-----~i~ 276 (883)
+ |.-..+ +.+ ...|...++||++++||.+.+.|+ ++.
T Consensus 167 t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~ 246 (403)
T PRK06289 167 DEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPI 246 (403)
T ss_pred CHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCC
Confidence 0 000001 000 002333458999999999988875 255
Q ss_pred EEEEeeeeccCCCCCCCC-----CCC-CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCC-
Q psy1120 277 ARVVHAKTNCDGYKEQGI-----TYP-SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPG- 348 (883)
Q Consensus 277 a~I~g~~~~~dg~~~~~~-----~~p-~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~- 348 (883)
++|+|++..++....... ..| .......+.+++|++||++++|||++|.|...|. .|+..++.. |++.
T Consensus 247 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~----~~l~~le~lGl~~~G 322 (403)
T PRK06289 247 PRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTP----SEYLAIDHIGLTGPG 322 (403)
T ss_pred EEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchH----HHHHHHHHcCCCCCC
Confidence 899999876543211100 001 2233567999999999999999999999998886 555555554 3321
Q ss_pred ------------CCCCeeecccCCC--CCCCcccchhhHHHHHHHHhhcC
Q psy1120 349 ------------RTTPLLIGSVKSN--IGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 349 ------------~~~~~~igs~K~~--~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
....++|+..-+. .||+.+|+|+..++.++.+|+..
T Consensus 323 e~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 372 (403)
T PRK06289 323 ESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGT 372 (403)
T ss_pred cHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhcc
Confidence 0123444433333 59999999999999999999864
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.4e-16 Score=176.08 Aligned_cols=239 Identities=20% Similarity=0.293 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.+++.+||+|||+++++|+ +|++|+..+.. .. ...+..++..+|+. .|.++
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID----~vi~g~~~~~~------------------~~-~~~a~~v~~~lGl~~~~p~~~ 84 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLD----EVILGCAMPSP------------------DE-ANIARVVALRLGCGEKVPAWT 84 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCC------------------Cc-ChHHHHHHHHhCcCCCceeee
Confidence 45889999999999999999888 58888653210 00 12455688899994 49999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh--------H---------------------HHHHh-----
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV--------S---------------------LQFAR----- 235 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~--------~---------------------~~~~~----- 235 (883)
|+++|+|++.|++.|+++|++|++|++||+|+|.+..... . ..+..
T Consensus 85 v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (426)
T PRK08170 85 VQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGL 164 (426)
T ss_pred ccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccccccccccccc
Confidence 9999999999999999999999999999999996543100 0 00000
Q ss_pred -cCCCCC---------------------------------C-------CC-----------CCCccc-------------
Q psy1120 236 -LGVLSP---------------------------------D-------GR-----------CKSFDE------------- 250 (883)
Q Consensus 236 -~~~ls~---------------------------------~-------g~-----------~~pfd~------------- 250 (883)
.++..+ . |. -.|++.
T Consensus 165 ~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~r~~~t~e~~ 244 (426)
T PRK08170 165 LRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVRPDSSMEKL 244 (426)
T ss_pred CccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCCCCCCCHHHH
Confidence 000000 0 00 011111
Q ss_pred ---------------CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy1120 251 ---------------AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYS 311 (883)
Q Consensus 251 ---------------~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~ 311 (883)
..|....+||++++||.+++.|+ ++.++|++++....... . ...+...+++++|+
T Consensus 245 ~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~---~---~~~~~~~a~~~al~ 318 (426)
T PRK08170 245 AKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPS---Q---MGLGPVHAATPLLQ 318 (426)
T ss_pred hcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCch---h---hcccHHHHHHHHHH
Confidence 03334468999999999999886 36678888876543221 1 12245689999999
Q ss_pred HcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh----hCCC---------CC--CCeeecccCCCCCCCcccchhhHHHH
Q psy1120 312 ECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV----FCPG---------RT--TPLLIGSVKSNIGHSEPASGVCSVTK 376 (883)
Q Consensus 312 ~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~----f~~~---------~~--~~~~igs~K~~~GH~~~AsG~~~li~ 376 (883)
++|++|+|||++|.|-..|. .|+..+... |++. .. .|+.....--..||+.||+|+..++.
T Consensus 319 ~aGl~~~did~~ei~daFa~----~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~ 394 (426)
T PRK08170 319 RHGLTLEDLDLWEINEAFAA----QVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLH 394 (426)
T ss_pred HcCCCHHHcCEEEecchhHH----HHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHH
Confidence 99999999999999977664 344222211 2211 01 12222222223599999999999999
Q ss_pred HHHHhhc
Q psy1120 377 VILAMEN 383 (883)
Q Consensus 377 ~~l~l~~ 383 (883)
++.+|++
T Consensus 395 l~~~l~~ 401 (426)
T PRK08170 395 LLHALKR 401 (426)
T ss_pred HHHHHHh
Confidence 9999875
|
|
| >KOG1390|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.6e-17 Score=165.62 Aligned_cols=232 Identities=20% Similarity=0.253 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCcee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~ 188 (883)
.++|.-.++.+|||++++++++.+. ||+|+-.+ .+.....+.+.+.--|| .-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~e----Vi~GnVl~-------------------AnlGQapaRQaalgAGlp~sv~~t 86 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAE----VIFGNVLS-------------------ANLGQAPARQAALGAGLPYSVPAT 86 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhh----hhhccccc-------------------cccCcchHHHHHhhcCCCcceeeE
Confidence 4568888999999999998887665 66664322 12223456666666666 56999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCC----------CCCCC---------------
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGV----------LSPDG--------------- 243 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~----------ls~~g--------------- 243 (883)
||+--|+|||.|+.+|+++|+.|..|++++||.|+|+.... +...+.+. +..||
T Consensus 87 TvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~-~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE 165 (396)
T KOG1390|consen 87 TVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPY-LYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAE 165 (396)
T ss_pred eehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcc-hhhhccCcCcCCeeeeechhhcchHHHhccCCcchhHh
Confidence 99999999999999999999999999999999999887552 11111111 00000
Q ss_pred -------------------------------------------------------------------CCCC-cccC----
Q psy1120 244 -------------------------------------------------------------------RCKS-FDEA---- 251 (883)
Q Consensus 244 -------------------------------------------------------------------~~~p-fd~~---- 251 (883)
..+| |-.+
T Consensus 166 ~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~~~ggTV 245 (396)
T KOG1390|consen 166 NTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFKEDGGTV 245 (396)
T ss_pred hhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccceeecCCCee
Confidence 0011 1111
Q ss_pred --CCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEE
Q psy1120 252 --ANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEA 325 (883)
Q Consensus 252 --~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~ 325 (883)
+|-....|||+++||.+.+.+. +++|+|++++-...- ...++ .+-..++.++|++||+..+||||+|.
T Consensus 246 TaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~--P~df~----iaP~laipk~lk~aG~~~sdVd~~Ei 319 (396)
T KOG1390|consen 246 TAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATE--PIDFT----IAPALAIPKALKKAGLEQSDVDYWEI 319 (396)
T ss_pred ccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccC--hhhcc----cchHHHHHHHHHHcCcchhhhhHHhh
Confidence 2333468999999999988876 599999999754322 22232 12367899999999999999999998
Q ss_pred ecCCCCCCcHHHHHHHHHh-----hCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 326 HGTGTKVGDPEEVQALENV-----FCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 326 hgtgt~~gD~~E~~Ai~~~-----f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
+ |+.+...+ ++ -+.+.+.+....-.+||+.|+||..-++..+..|++
T Consensus 320 N----------EAFs~v~lA~iK~Lg-ldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 320 N----------EAFSVVVLANIKKLG-LDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred h----------hhhhHHHHHHHHHhC-CCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 7 66655433 21 122345555555668999999999999999999987
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.1e-16 Score=173.87 Aligned_cols=236 Identities=14% Similarity=0.142 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceeee
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYTV 190 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~tv 190 (883)
.|+..+..++|+++|+++++++. |++|+..+. +.....++..++...|| +-|.+||
T Consensus 31 ~L~~~~~~~~l~r~~i~~~~id~----vi~G~~~~~------------------g~~g~n~aR~~al~aglp~~vp~~tv 88 (417)
T PRK06025 31 HLAATVLKALAERNGLNTADVDD----IIWSTSSQR------------------GKQGGDLGRMAALDAGYDIKASGVTL 88 (417)
T ss_pred HHHHHHHHHHHHhcCCCHHHCCE----EEEEcCCCc------------------CcccCcHHHHHHHhCCCCCCCCeeee
Confidence 36788999999999999988875 888865321 11112356667777777 5699999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH------H-----HHh--cCC---C---C-----------
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL------Q-----FAR--LGV---L---S----------- 240 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~------~-----~~~--~~~---l---s----------- 240 (883)
+..|+|||.||.+|++.|+.|++|++|+||+|+|+....+. . ... .++ . +
T Consensus 89 nr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~ 168 (417)
T PRK06025 89 DRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATM 168 (417)
T ss_pred ccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999987433110 0 000 000 0 0
Q ss_pred ---------------------------------C------------CCCC------------C-Cccc------CCCCc-
Q psy1120 241 ---------------------------------P------------DGRC------------K-SFDE------AANGY- 255 (883)
Q Consensus 241 ---------------------------------~------------~g~~------------~-pfd~------~~~G~- 255 (883)
| |... + .|+. ..+|.
T Consensus 169 ~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~~~~~~~g~~ 248 (417)
T PRK06025 169 EGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTT 248 (417)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccccccccCCccc
Confidence 0 0000 1 1331 01343
Q ss_pred ------------------------ccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHH
Q psy1120 256 ------------------------CRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLE 307 (883)
Q Consensus 256 ------------------------~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~ 307 (883)
..+||++++||.+.+.|+ +++++|.|++...+.... . +.+...+++
T Consensus 249 ~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~---~---~~~p~~Ai~ 322 (417)
T PRK06025 249 YRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL---M---LNAPVPAAK 322 (417)
T ss_pred cccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh---h---cccHHHHHH
Confidence 348999999999998886 478999999887654321 1 123368999
Q ss_pred HHHHHcCCCCCCccEEEEecCCCCCCcHHHHHH--HHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 308 DFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQA--LENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 308 ~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~A--i~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
++|+++|++++|||++|.|-.. .... ..+.++- ...++.+...+..+||+.|++|+..++.++..|+.+
T Consensus 323 ~aL~~AGl~~~DID~~ei~eaF-------a~~~l~~~~~lg~-~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~ 393 (417)
T PRK06025 323 KVLAKAGLTKDDIDLWEINEAF-------AVVAEKFIRDLDL-DRDKVNVNGGAIALGHPIGATGSILIGTVLDELERR 393 (417)
T ss_pred HHHHHcCCCHHHCcEEEEchHH-------HHHHHHHHHHcCC-ChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999332 2222 2233331 235777888888899999999999999999999763
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=170.61 Aligned_cols=239 Identities=17% Similarity=0.201 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv 190 (883)
..|+.|++.+||+|||++++++++ ++.+.... +. ....++..+|+++ |...+
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~----~~~~~~~~-------------------~~----~~~~~~~~lGl~~~~~~~v 78 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDG----YFCAGDAP-------------------GL----GPASMVDYLGLKLRHVDST 78 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEcCCCC-------------------Cc----cHHHHHHhCCCCCeeeccc
Confidence 458999999999999999988874 44321000 00 0134888899976 78889
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChh---h----HH------HHHh-cCCCC----------------
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPY---V----SL------QFAR-LGVLS---------------- 240 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~---~----~~------~~~~-~~~ls---------------- 240 (883)
+++|+|+..++..|++.|++|+||+|||+|++.+.+.. . +. .|.. .++..
T Consensus 79 ~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG 158 (388)
T PRK08142 79 ETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYG 158 (388)
T ss_pred cCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999988643210 0 00 0000 01110
Q ss_pred --------------CCCCCCC-------ccc--------------CCCCcccccceEEEEEccccccc---ceeEEEEee
Q psy1120 241 --------------PDGRCKS-------FDE--------------AANGYCRSEAVCIMYLQKSKDAK---RVYARVVHA 282 (883)
Q Consensus 241 --------------~~g~~~p-------fd~--------------~~~G~~~gEGa~~vvL~~~~~A~---~i~a~I~g~ 282 (883)
..+...| ++. .-|...++||++++||.+.+.|+ +..+.|+|+
T Consensus 159 ~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~v~I~g~ 238 (388)
T PRK08142 159 TTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLKRPLVKVLGA 238 (388)
T ss_pred cCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcCCCCEEEEEE
Confidence 0000111 110 13455679999999999998886 356899999
Q ss_pred eeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCC----------C--
Q psy1120 283 KTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPG----------R-- 349 (883)
Q Consensus 283 ~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~----------~-- 349 (883)
+..++.... ............+++++|++||++|+|||++|.|.+.|. .|...+... |++. +
T Consensus 239 ~~~~~~~~~-~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~----~~~~~~E~lGl~~~Ge~~~~v~~g~~~ 313 (388)
T PRK08142 239 GEAIKGQMG-GKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTI----TVLMQLEDLGFCKKGEGGKFVADGNLI 313 (388)
T ss_pred EEecCCccc-cCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchH----HHHHHHHHcCCCCCCchHHHHHCCCcc
Confidence 887664321 111112345568999999999999999999999999886 566666554 3221 1
Q ss_pred --CCCeee---cccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 350 --TTPLLI---GSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 350 --~~~~~i---gs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
...++| |..+++ ||+.+|+|+..++.++.+|+.
T Consensus 314 ~~~G~lPvN~sGG~l~~-G~p~gatG~~~~~E~~~QLrG 351 (388)
T PRK08142 314 SGVGKLPFNTDGGGLCN-NHPANRGGMTKVIEAVRQLRG 351 (388)
T ss_pred cCCCCccccCCChhhcC-CCcCcccHHHHHHHHHHHHcC
Confidence 134666 444444 999999999999999999975
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.2e-15 Score=173.18 Aligned_cols=247 Identities=20% Similarity=0.301 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv 190 (883)
..|+.+++++||+|||+++++++ .+++|+...+. ......+..++..+|+++ |.++|
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId----~vi~~~~~~~~------------------~~~~~~a~~va~~lG~~~~~~~~v 81 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQ----LVVGADTIRNG------------------YPGFVAGATFAQALGWNGAPVSSS 81 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCc------------------cCCccHHHHHHHHhCCCCCceecc
Confidence 56889999999999999888876 35656432210 001123567889999987 89999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChh--h--H-----HHHHh---cCCC-------------------
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPY--V--S-----LQFAR---LGVL------------------- 239 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~--~--~-----~~~~~---~~~l------------------- 239 (883)
+++|+|++.||..|+++|++|++|.+||+|+|.+.... . . ..+.. .++.
T Consensus 82 ~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s 161 (399)
T PRK06059 82 YAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGAT 161 (399)
T ss_pred cchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999754310 0 0 00000 1110
Q ss_pred -----------------CCCCCC-CCcc--------------cCCCCcccccceEEEEEccccccc------ceeEEEEe
Q psy1120 240 -----------------SPDGRC-KSFD--------------EAANGYCRSEAVCIMYLQKSKDAK------RVYARVVH 281 (883)
Q Consensus 240 -----------------s~~g~~-~pfd--------------~~~~G~~~gEGa~~vvL~~~~~A~------~i~a~I~g 281 (883)
.|+-.. +|.+ ..-|....+|||+++||.+.+.|+ +..++|+|
T Consensus 162 ~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g 241 (399)
T PRK06059 162 VEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRA 241 (399)
T ss_pred HHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEE
Confidence 011000 0111 012445568999999999987764 34578998
Q ss_pred eeeccCCCC-----CCCCC--------CCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCC
Q psy1120 282 AKTNCDGYK-----EQGIT--------YPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCP 347 (883)
Q Consensus 282 ~~~~~dg~~-----~~~~~--------~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~ 347 (883)
++...+... ...+. .++......+.+++|+++|++++|||++|.|.+.|. .|+..++.. |++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~----~~l~~~e~lGl~~ 317 (399)
T PRK06059 242 ISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTA----LELDWYEHLGLCP 317 (399)
T ss_pred EEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChH----HHHHHHHHcCCCC
Confidence 876543211 11121 111222357899999999999999999999988775 566555443 221
Q ss_pred C-------------CCC--CeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 348 G-------------RTT--PLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 348 ~-------------~~~--~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
. ... |+.....--..||+.||+|+..++.++++|+..
T Consensus 318 ~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~ 369 (399)
T PRK06059 318 KGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQ 369 (399)
T ss_pred CCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccC
Confidence 0 011 344444444469999999999999999999864
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.4e-16 Score=176.47 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=157.6
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHH-HHHHhhCCCC-ce
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLAN-RVSYWLGVNG-PS 187 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~is~~~~l~G-ps 187 (883)
....|+.+++.+||+|+|+++++++ .|++|+..+++.. . .++. .+...+++.+ |+
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID----~vi~g~~~~~~~g------------------~-~~~~~~~~~~lg~~~~p~ 78 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVE----EACLGQVLGAGEG------------------Q-NCAQQAAMHAGGLQEAPA 78 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEccCCccc------------------C-cHHHHHHHHcCCCCCCcE
Confidence 3456889999999999999999887 4788876544210 0 1111 2456677765 99
Q ss_pred eeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh-------HHH----H--------------------Hhc
Q psy1120 188 YTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV-------SLQ----F--------------------ARL 236 (883)
Q Consensus 188 ~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~-------~~~----~--------------------~~~ 236 (883)
++|+++|+|++.|++.|++.|++|++|++||+|+|.+..... .-. + .+.
T Consensus 79 ~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~~~~~~~ 158 (393)
T cd00826 79 IGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKD 158 (393)
T ss_pred EEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999998643110 000 0 001
Q ss_pred CCCC--------CC--C----CCCCccc------------------------CCCCcccccceEEEEEcccccccc----
Q psy1120 237 GVLS--------PD--G----RCKSFDE------------------------AANGYCRSEAVCIMYLQKSKDAKR---- 274 (883)
Q Consensus 237 ~~ls--------~~--g----~~~pfd~------------------------~~~G~~~gEGa~~vvL~~~~~A~~---- 274 (883)
|... ++ + ...|+-. ..|...++|||+++||.+.+.|++
T Consensus 159 G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~ 238 (393)
T cd00826 159 GRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQ 238 (393)
T ss_pred CCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHHHHHcCCc
Confidence 1110 11 0 0001111 122333589999999999887752
Q ss_pred -eeEEEEeeeeccCCCCC----CCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCC
Q psy1120 275 -VYARVVHAKTNCDGYKE----QGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPG 348 (883)
Q Consensus 275 -i~a~I~g~~~~~dg~~~----~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~ 348 (883)
....|.+.+...+.... .........+...+++++|++||++++|||++|.|...+. .|+..++.+ |+..
T Consensus 239 ~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~----~~l~~~e~lgl~~~ 314 (393)
T cd00826 239 SKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAA----NACATNEALGLCPE 314 (393)
T ss_pred ccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHH----HHHHHHHHhCCCcc
Confidence 12334443322221100 0000012334579999999999999999999999977664 455555554 2221
Q ss_pred ---------------CCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 349 ---------------RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 349 ---------------~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
...|+.....--..||+.||+|+..++.++.+|+..
T Consensus 315 g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~ 365 (393)
T cd00826 315 GQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGE 365 (393)
T ss_pred cchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhh
Confidence 012333333333359999999999999999999753
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.6e-16 Score=173.11 Aligned_cols=238 Identities=18% Similarity=0.182 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
..|+.+++.+||+|||+++++++ +|++|+..... +.. ..++..+....|| ..|.++
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID----~vv~g~~~~~~-----------------~~~-~~~~~~~~l~~gl~~~~p~~~ 84 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVD----DVIFGCVDTIG-----------------PQA-GNIARTSWLAAGLPEEVPGVT 84 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEEeeccCC-----------------ccc-ccHHHHHHHHcCCCCCCceee
Confidence 34889999999999999999887 47777531100 000 0022222233444 469999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hh--h--HH-------------HH-HhcCCC--C--------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PY--V--SL-------------QF-ARLGVL--S-------- 240 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~--~--~~-------------~~-~~~~~l--s-------- 240 (883)
|+++|+||+.|++.|+++|++|++|++||+|++.+.. |. . .. .+ ...+.. +
T Consensus 85 v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~ 164 (382)
T PRK07801 85 VDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELI 164 (382)
T ss_pred ecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999996533 21 0 00 00 001100 0
Q ss_pred -------------------------C-CCCC--C--Ccc----------------------------cCCCCcccccceE
Q psy1120 241 -------------------------P-DGRC--K--SFD----------------------------EAANGYCRSEAVC 262 (883)
Q Consensus 241 -------------------------~-~g~~--~--pfd----------------------------~~~~G~~~gEGa~ 262 (883)
+ .|.. . |++ ...|...++||++
T Consensus 165 ~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaa 244 (382)
T PRK07801 165 AEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGAS 244 (382)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceE
Confidence 0 0000 0 110 1123344589999
Q ss_pred EEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHH
Q psy1120 263 IMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEV 338 (883)
Q Consensus 263 ~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~ 338 (883)
++||.+.+.|+ +++++|+|++...+... ...+ +...++++||+++|++|+|||++|.|...|. .|.
T Consensus 245 a~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~-~~~~-----~~~~a~~~a~~~agi~~~did~~e~~d~Fa~----~~~ 314 (382)
T PRK07801 245 AVLLASERAVKRHGLTPRARIHHLSVRGDDPV-FMLT-----APIPATRYALEKTGLSIDDIDVVEINEAFAP----VVL 314 (382)
T ss_pred EEEEecHHHHHHCCCCccEEEEEEEEecCChH-hhcc-----ChHHHHHHHHHHcCCCHHHcCEeeecccchH----HHH
Confidence 99999998886 36789999866544211 0111 1247899999999999999999999987764 566
Q ss_pred HHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 339 QALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 339 ~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
..++.. +- ..+|+...+.+..+||+.+|+|+..++.++.+|+.
T Consensus 315 ~~~e~l-G~-~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~ 357 (382)
T PRK07801 315 AWLKET-GA-DPAKVNPNGGAIALGHPLGATGAKLMTTLLHELER 357 (382)
T ss_pred HHHHHh-CC-CchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHh
Confidence 555553 21 12477788888888999999999999999999986
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.2e-15 Score=165.15 Aligned_cols=243 Identities=16% Similarity=0.166 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHHCC-CCC-CCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Ccee
Q psy1120 112 CRIILEKTYEAVIDAG-INP-KSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSY 188 (883)
Q Consensus 112 ~rl~l~aa~eALedAG-~~~-~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~ 188 (883)
..|+.+++.+||+||| +++ +++++ +++++. +.. ... ......++..+|+. .|.+
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId~----~~~~~~--~~~----------~~~-------~~~~~~~~~~lg~~~~~~~ 82 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVDS----FISCQE--DFW----------EGI-------AIADEFAPDQIGGAMRPTM 82 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCCE----EEEecC--ccc----------Ccc-------cccchhHHHHcccCCCCeE
Confidence 4589999999999999 986 68874 666531 100 000 01112355778874 4777
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh------------------------HHHHH------hcCC
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV------------------------SLQFA------RLGV 238 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~------------------------~~~~~------~~~~ 238 (883)
.| |+|+..|++.|+++|++|+||+|||.|++.+..... ++.+. +.|.
T Consensus 83 ~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~ 159 (385)
T PRK06066 83 TV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGI 159 (385)
T ss_pred EE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCc
Confidence 77 899999999999999999999999999885432100 00000 0000
Q ss_pred C-----------------CCCCC-CCCcc--------------cCCCCcccccceEEEEEcccccccc---eeEEEEeee
Q psy1120 239 L-----------------SPDGR-CKSFD--------------EAANGYCRSEAVCIMYLQKSKDAKR---VYARVVHAK 283 (883)
Q Consensus 239 l-----------------s~~g~-~~pfd--------------~~~~G~~~gEGa~~vvL~~~~~A~~---i~a~I~g~~ 283 (883)
- .|.-. .+|.+ ...|....+||++++||.+.+.|++ ...+|+|++
T Consensus 160 t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv~I~g~g 239 (385)
T PRK06066 160 TREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPVWIKGIG 239 (385)
T ss_pred CHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEE
Confidence 0 00000 00111 0135556799999999999988862 234899888
Q ss_pred eccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC--CCCccEEEEecCCCCCCcHHHHHHHHHh-hCCCC-----------
Q psy1120 284 TNCDGYKEQGITYPSGALQQRLLEDFYSECEVD--PKNLAWIEAHGTGTKVGDPEEVQALENV-FCPGR----------- 349 (883)
Q Consensus 284 ~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~--~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~~----------- 349 (883)
...+.................+.+++|++||++ ++|||++|.|...|. .|...++.. |++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~----~~l~~~e~lG~~~~Ge~~~~v~~G~~ 315 (385)
T PRK06066 240 WSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSY----KELQHIEALRLSEEPEKDSLLREGNF 315 (385)
T ss_pred EecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChH----HHHHHHHHcCCCCCCchHHHHHCCCC
Confidence 765422111111112333457999999999997 699999999988875 555555544 22210
Q ss_pred --CCCeeeccc--CCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 350 --TTPLLIGSV--KSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 350 --~~~~~igs~--K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
..+++|+.. --..||+.||+|+..++.++.+|+..
T Consensus 316 ~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~ 354 (385)
T PRK06066 316 DPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGE 354 (385)
T ss_pred CCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHccc
Confidence 123343333 33359999999999999999999864
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.8e-15 Score=163.84 Aligned_cols=263 Identities=16% Similarity=0.249 Sum_probs=169.9
Q ss_pred CcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 33 DEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
..|.|+++|..+|.- .+.+++++.+.... .|-. .+.| ++...+ ..+ -...
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~--------~~i~--------~~~g-------i~~r~~-~~~-----~~~~ 52 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSD--------EWIV--------TRTG-------IKERRI-AAP-----DETT 52 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCH--------HHhh--------hhcC-------eEEEEe-CCC-----CCCH
Confidence 358899999999985 57788877642110 0000 0111 000000 000 1235
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv 190 (883)
..|+.+++.+||+++|+++++++ .+++|++..++. . ...+.+|+..+|+++ |.++|
T Consensus 53 ~~la~~A~~~al~~agl~~~~id----~vi~~~~~~~~~------------------~-~~~~~~i~~~lG~~~~~~~~v 109 (319)
T PRK09352 53 SDLATEAAKKALEAAGIDPEDID----LIIVATTTPDYA------------------F-PSTACLVQARLGAKNAAAFDL 109 (319)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------C-chHHHHHHHHhCCCCCcEeec
Confidence 78999999999999999988876 477776543210 1 124678999999987 89999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
.++|+|++.||..|++.|++|++|.+||+|+|.+.... . ++....+++.||||++++|++.+
T Consensus 110 ~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-----------~-------~~~~~~~~~~gDGaaA~ll~~~~ 171 (319)
T PRK09352 110 SAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV-----------D-------WTDRSTCVLFGDGAGAVVLGASE 171 (319)
T ss_pred cccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc-----------C-------cccCCceEEEeccceEEEEEEcC
Confidence 99999999999999999999999999999999843211 0 11223567999999999999876
Q ss_pred cccceeEEEEeeeeccCCCCCCCCCCC---------------C--------HHHHHHHHHHHHHHcCCCCCCccEEEEec
Q psy1120 271 DAKRVYARVVHAKTNCDGYKEQGITYP---------------S--------GALQQRLLEDFYSECEVDPKNLAWIEAHG 327 (883)
Q Consensus 271 ~A~~i~a~I~g~~~~~dg~~~~~~~~p---------------~--------~~~~~~~i~~al~~agl~~~dI~~ve~hg 327 (883)
+. ++ .++...+++.....++.| . .....++++++|+++|++++||+|+..|.
T Consensus 172 ~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~ 246 (319)
T PRK09352 172 EP-GI----LSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWLVPHQ 246 (319)
T ss_pred CC-Ce----EEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC
Confidence 54 22 222222222111001001 0 12345689999999999999999999996
Q ss_pred CCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 328 TGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 328 tgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
.+.. =...+.+.++-.. +.+ -.....+||+.+|+=...|..++
T Consensus 247 ~~~~-----~~~~~~~~lg~~~-~~~--~~~~~~~Gn~~~a~~~~~L~~~~ 289 (319)
T PRK09352 247 ANLR-----IIDATAKKLGLPM-EKV--VVTVDKYGNTSAASIPLALDEAV 289 (319)
T ss_pred CCHH-----HHHHHHHHhCCCH-HHh--hhhHHhhCCHHHHHHHHHHHHHH
Confidence 5433 2233444443211 112 22345799999888777765544
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.7e-15 Score=165.98 Aligned_cols=232 Identities=16% Similarity=0.224 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~t 189 (883)
..|+.++..+++ +|++ ++++. |++|+..++. ..++..++...|+. -|+++
T Consensus 26 ~~L~~~a~~~~~--~gi~-~~Id~----vi~G~~~~~~---------------------~~~~r~~~~~~Gl~~~~p~~t 77 (361)
T PRK06690 26 QQLAAPLLTFLS--KGME-REIDD----VILGNVVGPG---------------------GNVARLSALEAGLGLHIPGVT 77 (361)
T ss_pred HHHHHHHHHHHH--ccch-hhcCE----EEEEecCCCc---------------------chHHHHHHHHcCCCCCCCcee
Confidence 457788888874 4885 67763 8888653220 12233477888885 49999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH--H------------H------HHhcCCC----------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS--L------------Q------FARLGVL---------- 239 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~--~------------~------~~~~~~l---------- 239 (883)
|+++|+||+.|+..|++.|++|++|++||||+|.+.+.... . . ..+.|.-
T Consensus 78 V~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~ 157 (361)
T PRK06690 78 IDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACL 157 (361)
T ss_pred hhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999987642110 0 0 0000000
Q ss_pred C--------CCCC---------------C--------------CCccc-----CCCCcccccceEEEEEccccccc----
Q psy1120 240 S--------PDGR---------------C--------------KSFDE-----AANGYCRSEAVCIMYLQKSKDAK---- 273 (883)
Q Consensus 240 s--------~~g~---------------~--------------~pfd~-----~~~G~~~gEGa~~vvL~~~~~A~---- 273 (883)
| .++. . ..|+. ..|...++||++++||.+.+.|+
T Consensus 158 s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~ 237 (361)
T PRK06690 158 SYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGY 237 (361)
T ss_pred HHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCC
Confidence 0 0011 0 11211 12223359999999999998886
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCe
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPL 353 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~ 353 (883)
++.++|.|++....... . ...+...+++++|+++|++++|||++|.|-+.+. .+...+++ ++- ...++
T Consensus 238 ~p~~~i~~~~~~~~~~~---~---~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~----~~~~~~e~-lgl-~~~~v 305 (361)
T PRK06690 238 KPVLRFVRSAVVGVDPN---L---PGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFAS----KVVACAKE-LQI-PYEKL 305 (361)
T ss_pred CceEEEEEEEEeccCcc---c---chhHHHHHHHHHHHHcCCCHHHcCEeeecchhHH----HHHHHHHh-cCC-Cchhc
Confidence 46678898876543211 1 1346788999999999999999999999944332 12222221 211 12356
Q ss_pred eecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 354 LIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 354 ~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
.+.+.+..+||+.|++|++.++.++.++++
T Consensus 306 n~~GG~la~Ghp~GatG~~~~~~~~~ql~~ 335 (361)
T PRK06690 306 NVNGGAIALGHPYGASGAMLVTRLFYQAKR 335 (361)
T ss_pred ccCCcHHhccCchhhhHHHHHHHHHHHHHH
Confidence 666666677999999999999999999976
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-14 Score=160.85 Aligned_cols=224 Identities=12% Similarity=0.152 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC---ce
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG---PS 187 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G---ps 187 (883)
...|+.+++.+||+++|+++++++. +++++..+++. ....+.++...+|+++ |+
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~dId~----li~~~~~~~~~-------------------~p~~a~~v~~~lgl~~~~~~~ 108 (329)
T PRK07204 52 SSYMGAEAAKKAVEDAKLTLDDIDC----IICASGTIQQA-------------------IPCTASLIQEQLGLQHSGIPC 108 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEECCCCCCC-------------------CccHHHHHHHHhCCCCCCceE
Confidence 4679999999999999999988863 66665433320 1245778999999975 89
Q ss_pred eeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEc
Q psy1120 188 YTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQ 267 (883)
Q Consensus 188 ~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~ 267 (883)
+.|+.+|+|++.||++|.+.|++|.++.+||+++|...... .++...++++.||||+++||+
T Consensus 109 ~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~lfGDGAaA~ll~ 170 (329)
T PRK07204 109 FDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGL------------------NWGQNESCILFGDGAAAVVIT 170 (329)
T ss_pred EEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCC------------------CcccCcceEEEecccEEEEEE
Confidence 99999999999999999999999999999999999732210 122334678899999999999
Q ss_pred ccccccceeE-------------EEEeeeeccCCCCCCCCC------CCCH--------HHHHHHHHHHHHHcCCCCCCc
Q psy1120 268 KSKDAKRVYA-------------RVVHAKTNCDGYKEQGIT------YPSG--------ALQQRLLEDFYSECEVDPKNL 320 (883)
Q Consensus 268 ~~~~A~~i~a-------------~I~g~~~~~dg~~~~~~~------~p~~--------~~~~~~i~~al~~agl~~~dI 320 (883)
+.+...++.+ .+.+.+...+........ ..++ ....++++++|+++|++++||
T Consensus 171 ~~~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~di 250 (329)
T PRK07204 171 KGDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADI 250 (329)
T ss_pred EcCCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 8765433332 222222111110000000 0011 124588999999999999999
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 321 AWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 321 ~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
|++-.|..+.+. .+++.+.++-.. ++ +-.....+||+.+|+=...|..+ ++++.+
T Consensus 251 d~~~~H~~~~~~-----~~~i~~~l~l~~-e~--~~~~~~~~Gn~~sas~~~~L~~~---~~~g~~ 305 (329)
T PRK07204 251 DLIVPHQASGPA-----MRLIRKKLGVDE-ER--FVTIFEDHGNMIAASIPVALFEA---IKQKKV 305 (329)
T ss_pred CEEEeCCCCHHH-----HHHHHHHcCCCH-HH--hhhhHhhhCcHHHHHHHHHHHHH---HHcCCC
Confidence 999999887763 446677775321 12 22566788999877755555543 445544
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.4e-14 Score=161.28 Aligned_cols=242 Identities=14% Similarity=0.183 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+|+.+||+++|+++++++. +++++..+++. .+ ..+..+...+|++. |.+.
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId~----li~~s~~~~~~------------------~p-~~a~~v~~~Lgl~~~~~~~ 119 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIEL----LACGTSQPDQL------------------MP-GHASMVHGELGAPPIEVVS 119 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEEECCCCcC------------------Ch-HHHHHHHhhCCCCCCceee
Confidence 5689999999999999999988863 67776544321 11 23457888889865 8899
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHh-cCCCC--CCCCCCCcccCCCCcccccceEEEEE
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFAR-LGVLS--PDGRCKSFDEAANGYCRSEAVCIMYL 266 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~-~~~ls--~~g~~~pfd~~~~G~~~gEGa~~vvL 266 (883)
|+.+|+|++.||+.|.+.|++|.++.+||+|+|.+........+.. .+.+. ++..+++|+.+..|++.||||+|+||
T Consensus 120 v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl 199 (378)
T PRK06816 120 SAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLL 199 (378)
T ss_pred ecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEE
Confidence 9999999999999999999999999999999998655433222211 12222 23467899999999999999999999
Q ss_pred cccccccce----eEEEEeee-ecc-----CC-CC-----CCCCC--C-------------CCHHH--------HHHHHH
Q psy1120 267 QKSKDAKRV----YARVVHAK-TNC-----DG-YK-----EQGIT--Y-------------PSGAL--------QQRLLE 307 (883)
Q Consensus 267 ~~~~~A~~i----~a~I~g~~-~~~-----dg-~~-----~~~~~--~-------------p~~~~--------~~~~i~ 307 (883)
++.++...+ .....+.. ... .| .. ..... . .+... ....++
T Consensus 200 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 279 (378)
T PRK06816 200 ENKPRPDGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLL 279 (378)
T ss_pred EecCCCCCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHH
Confidence 876653211 11110110 000 00 00 00000 0 01111 167788
Q ss_pred HHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhh-----CCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhh
Q psy1120 308 DFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVF-----CPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAME 382 (883)
Q Consensus 308 ~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f-----~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~ 382 (883)
++|+++|++++||||+-.|-......+ ++.+.+ +-. .++.. ..-..+||+.+||-...|..+ ++
T Consensus 280 ~~L~~~gl~~~DId~~v~Hq~n~~~~~-----~v~~~l~~~~~gl~-~~k~~--~~~~~~GNt~sAsipi~L~~a---~~ 348 (378)
T PRK06816 280 ELVDKRNLDPDDIDYFLPHYSSEYFRE-----KIVELLAKAGFMIP-EEKWF--TNLATVGNTGSASIYIMLDEL---LN 348 (378)
T ss_pred HHHHHcCCChhhCCEEeeCcccHHHHH-----HHHHHHHhccCCCC-hhheE--EeccccccccchHHHHHHHHH---HH
Confidence 899999999999999999965544322 333333 211 11222 223478999999877777544 45
Q ss_pred cCCC
Q psy1120 383 NGII 386 (883)
Q Consensus 383 ~~~i 386 (883)
++.+
T Consensus 349 ~g~~ 352 (378)
T PRK06816 349 SGRL 352 (378)
T ss_pred cCCC
Confidence 5554
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1e-14 Score=165.63 Aligned_cols=244 Identities=17% Similarity=0.208 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHh--hCCCCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYW--LGVNGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~--~~l~Gps~t 189 (883)
..|+.+++.+||+|+|+++++++. |++|+..+... . ..++..++.. ++...|+++
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id~----vv~G~~~~~~~------------------~-~~~~r~~~l~~gl~~~~p~~~ 88 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLGE----VVAGAVLKHSR------------------D-FNLTRECVLGSALSPYTPAYD 88 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEEecccCCc------------------c-ccHHHHHHHHcCCCCCCceee
Confidence 358899999999999999998874 77776432100 0 1133344444 444689999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH----------------------------HHH------h
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL----------------------------QFA------R 235 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~----------------------------~~~------~ 235 (883)
|+++|+||+.|+..|++.|++|++|++||||+|.+....... ... .
T Consensus 89 V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (427)
T PRK09268 89 LQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPR 168 (427)
T ss_pred eechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccccCcc
Confidence 999999999999999999999999999999999865321100 000 0
Q ss_pred -----cCC-C------------------------------------------CCC------CCCC-------------Cc
Q psy1120 236 -----LGV-L------------------------------------------SPD------GRCK-------------SF 248 (883)
Q Consensus 236 -----~~~-l------------------------------------------s~~------g~~~-------------pf 248 (883)
.+. + .|. ...| .|
T Consensus 169 ~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e~l~~~~~v~ 248 (427)
T PRK09268 169 NGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLEKLAKLKPVF 248 (427)
T ss_pred ccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHHHHhCCCccc
Confidence 011 0 011 0111 12
Q ss_pred cc-------CCCCcccccceEEEEEccccccc----ceeEEE-EeeeeccCCCCC-CCCCCCCHHHHHHHHHHHHHHcCC
Q psy1120 249 DE-------AANGYCRSEAVCIMYLQKSKDAK----RVYARV-VHAKTNCDGYKE-QGITYPSGALQQRLLEDFYSECEV 315 (883)
Q Consensus 249 d~-------~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I-~g~~~~~dg~~~-~~~~~p~~~~~~~~i~~al~~agl 315 (883)
+. ..|...++||++++||.+.+.|+ ++.++| .+.....+.... ..+ ..+...+++++|++||+
T Consensus 249 ~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~----~~~~~~a~~~a~~~AGl 324 (427)
T PRK09268 249 GKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGL----LMAPAYAVPRLLARNGL 324 (427)
T ss_pred ccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchh----hccHHHHHHHHHHHcCC
Confidence 21 12233468999999999998886 244455 455554543110 011 12345799999999999
Q ss_pred CCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCC---------CCCCeeecccC--CCCCCCcccchhhHHHHHHHHhhc
Q psy1120 316 DPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPG---------RTTPLLIGSVK--SNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 316 ~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~---------~~~~~~igs~K--~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
+|+|||++|.|...|.. -..|+..+... |++. ....++|+..- -.+||+.+|+|+..++.++.+|+.
T Consensus 325 ~~~Did~~Ei~d~Fa~~-~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e~~~QL~~ 403 (427)
T PRK09268 325 TLQDFDFYEIHEAFASQ-VLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE 403 (427)
T ss_pred CHHHCCEEEeccccHHH-HHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHHHHHHHHh
Confidence 99999999999877641 11233333321 2211 01123332222 235999999999999999999975
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-14 Score=158.57 Aligned_cols=216 Identities=17% Similarity=0.266 Sum_probs=149.9
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC-CCcee
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV-NGPSY 188 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l-~Gps~ 188 (883)
....|+.+++.+||+++|+++++++ .+++++...++. ....+.+++..+|+ +.|.+
T Consensus 49 ~~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~-------------------~~~~~~~l~~~lg~~~~~~~ 105 (320)
T cd00830 49 TTSDLAVEAAKKALEDAGIDADDID----LIIVATSTPDYL-------------------FPATACLVQARLGAKNAAAF 105 (320)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------------CCcHHHHHHHHhCCCCCcEe
Confidence 3578999999999999999988876 366665443321 01246789999999 56889
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
.|+.+|+|++.||.+|+++|++|.++.+||+++|.+.... .|+....+++.||||+++||++
T Consensus 106 ~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~~~~~~~~~GDgAaA~ll~~ 167 (320)
T cd00830 106 DINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL------------------DWTDRSTAVLFGDGAGAVVLEA 167 (320)
T ss_pred eccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------CcccCCceEEEeccceEEEEEe
Confidence 9999999999999999999999999999999999843211 1344557899999999999998
Q ss_pred cccccceeEEEEeeeeccCCCCCCCCC-----------------------CC-----CHHHHHHHHHHHHHHcCCCCCCc
Q psy1120 269 SKDAKRVYARVVHAKTNCDGYKEQGIT-----------------------YP-----SGALQQRLLEDFYSECEVDPKNL 320 (883)
Q Consensus 269 ~~~A~~i~a~I~g~~~~~dg~~~~~~~-----------------------~p-----~~~~~~~~i~~al~~agl~~~dI 320 (883)
.+...++.. +...+++.....+. .. ......++++++|+++|++++||
T Consensus 168 ~~~~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di 243 (320)
T cd00830 168 TEEDPGILD----SVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDI 243 (320)
T ss_pred cCCCCcEEE----EEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHC
Confidence 765323322 22222211000000 00 01234578999999999999999
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 321 AWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 321 ~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
+|+..|..+...- +.+.+.++-. .+++. ..-..+||+.+|+=...|..++
T Consensus 244 ~~~~~h~~~~~~~-----~~~~~~lgl~-~~~~~--~~~~~~Gn~~sas~~~~L~~~~ 293 (320)
T cd00830 244 DWFVPHQANLRII-----EAVAKRLGLP-EEKVV--VNLDRYGNTSAASIPLALDEAI 293 (320)
T ss_pred CEEEECCCCHHHH-----HHHHHHhCCC-HHHhh--hhHHhhCcHHHHHHHHHHHHHH
Confidence 9999997765532 3345555421 11221 2345789999998877776654
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.2e-14 Score=152.78 Aligned_cols=228 Identities=18% Similarity=0.306 Sum_probs=149.8
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-cee
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSY 188 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~ 188 (883)
....|+.+|+.+||++||+++++|+- +++.+.++|+. ....|.+|...||+++ +.+
T Consensus 51 ~~s~la~~Aa~~AL~~Agi~~~dIDl----II~aT~tpd~~-------------------~Ps~A~~vq~~LG~~~~~af 107 (323)
T COG0332 51 TTSDLAVEAARKALEDAGISPDDIDL----IIVATSTPDHL-------------------FPSTACLVQARLGLGGAPAF 107 (323)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCE----EEEEcCCcccC-------------------CChHHHHHHHHhCCCCccee
Confidence 35679999999999999999999983 77787766642 1246789999999987 999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
-+..+||+.++||..|.+.|++|.++.+||.|.|.+.. ..-|+.+...+.+|||||++||++
T Consensus 108 Dl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~------------------~ld~~dR~t~vlFgDGAgAvvl~~ 169 (323)
T COG0332 108 DLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSR------------------ILDWTDRDTCVLFGDGAGAVVLEA 169 (323)
T ss_pred echhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhc------------------cCCHhhccceEEEcCCceEEEEec
Confidence 99999999999999999999999999999999998421 112334467889999999999999
Q ss_pred cccccceeEEEEee-eecc-----CCC-------CCC-CCCCC--------CHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 269 SKDAKRVYARVVHA-KTNC-----DGY-------KEQ-GITYP--------SGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 269 ~~~A~~i~a~I~g~-~~~~-----dg~-------~~~-~~~~p--------~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
.++-..++..-.++ +... .+. ... ....- ....+..+++++|+++|++++||||+-.|
T Consensus 170 ~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpH 249 (323)
T COG0332 170 TEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPH 249 (323)
T ss_pred CCCCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccc
Confidence 86222222111111 1000 000 000 00000 12346788999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCC
Q psy1120 327 GTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPN 389 (883)
Q Consensus 327 gtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~ 389 (883)
=.. .-=.+++.+.++- ..++.. ..--..|++-+||=...|.+ .+++|.|.|.
T Consensus 250 Qan-----~ri~~~i~~~l~~-~~~k~~--~~~~~yGNtsaAsiplaL~~---~~~~g~ik~G 301 (323)
T COG0332 250 QAN-----LRIIEAIAKKLGI-PEEKVV--VTVDKYGNTSAASIPLALDE---ALREGRIKPG 301 (323)
T ss_pred ccc-----HHHHHHHHHHcCC-CHHHHh--hHHHHhcccccchHHHHHHH---HhhhCCCCCC
Confidence 221 1123344444432 111111 11223577777764443333 3455555443
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.4e-14 Score=154.28 Aligned_cols=215 Identities=18% Similarity=0.318 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+++.+||+++|+++++++ .+++++...++. ....+.+++..+|+++ |.+.
T Consensus 51 ~~~la~~A~~~al~~agl~~~~Id----~~i~~~~~~~~~-------------------~~~~a~~l~~~lGl~~~~~~~ 107 (318)
T TIGR00747 51 SSTMGFEAAKRAIENAGISKDDID----LIIVATTTPDHA-------------------FPSAACMVQAYLGIKGIPAFD 107 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC-------------------CChHHHHHHHHhCCCCCcEee
Confidence 467899999999999999988876 466766543321 0124578999999988 8999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+.+|+|++.||..|+.+|++|.++.+||+|+|.+.... ++. .....++.||||+++||++.
T Consensus 108 v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~-----------------~~~-~~~~~~~~GDGAaA~lL~~~ 169 (318)
T TIGR00747 108 LSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL-----------------DWT-DRGTCVLFGDGAGAVVLGES 169 (318)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-----------------CcC-CCCeEEEEecceeEEEEeec
Confidence 999999999999999999999999999999999843321 111 12345678999999999987
Q ss_pred ccccceeEEEEeeeeccCCCCCCCCCCC-----------------------CHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 270 KDAKRVYARVVHAKTNCDGYKEQGITYP-----------------------SGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 270 ~~A~~i~a~I~g~~~~~dg~~~~~~~~p-----------------------~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
+...+ |.++....++.....+..| ......++++++|+++|++++||+|+..|
T Consensus 170 ~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h 245 (318)
T TIGR00747 170 EDPGG----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFVPH 245 (318)
T ss_pred CCCCc----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 65433 2222222222110000000 01224567899999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 327 GTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 327 gtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
..+.+ =...+.+.++-.. +++. ... ..+||+.+|+=...|..+.
T Consensus 246 ~~~~~-----~~~~~~~~lgi~~-~k~~-~~~-~~~Gn~~sas~~~~L~~~~ 289 (318)
T TIGR00747 246 QANLR-----IIEALAKRLELDM-SQVV-KTV-HKYGNTSAASIPLALDELL 289 (318)
T ss_pred CCCHH-----HHHHHHHHcCCCH-HHee-ehH-hhhCCHHHHHHHHHHHHHH
Confidence 77654 3333455554211 1222 223 3589999998777765543
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=9e-14 Score=160.64 Aligned_cols=245 Identities=11% Similarity=0.048 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHCCCC--CCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-cee
Q psy1120 112 CRIILEKTYEAVIDAGIN--PKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSY 188 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~--~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~ 188 (883)
..|+.+++.+||+|||++ +++|+ +++++...+.. .+.....++..+|+.. +..
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID----~v~v~~~~~~~--------------------~~~~~~~la~~lGl~p~~~~ 83 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAID----SVAVVNQLSWR--------------------YRDPPGLLAERLGADPARTV 83 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCC----EEEEecccccc--------------------ccCHHHHHHHHcCCCCccee
Confidence 458999999999999998 88887 46665432210 0122467888999864 455
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH-----------------------------HHHhcCCC
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL-----------------------------QFARLGVL 239 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~-----------------------------~~~~~~~l 239 (883)
...++|+|+..+|+.|++.|++|+||+|||+|++.+.+..... .....|+.
T Consensus 84 ~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~ 163 (498)
T PRK08257 84 YSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLD 163 (498)
T ss_pred EecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCC
Confidence 5677888999999999999999999999999998743210000 00011111
Q ss_pred CCC--------------C----------------------------CCCCcccC------------------CCCc-ccc
Q psy1120 240 SPD--------------G----------------------------RCKSFDEA------------------ANGY-CRS 258 (883)
Q Consensus 240 s~~--------------g----------------------------~~~pfd~~------------------~~G~-~~g 258 (883)
.|. | ..++++.+ -+.. ...
T Consensus 164 ~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~ 243 (498)
T PRK08257 164 RPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMV 243 (498)
T ss_pred CcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCc
Confidence 100 0 00111111 1112 258
Q ss_pred cceEEEEEcccccccc------eeEEEEeeeeccCCCCCCCCC-CCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCC
Q psy1120 259 EAVCIMYLQKSKDAKR------VYARVVHAKTNCDGYKEQGIT-YPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTK 331 (883)
Q Consensus 259 EGa~~vvL~~~~~A~~------i~a~I~g~~~~~dg~~~~~~~-~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~ 331 (883)
||++++||.+.+.|++ ....|.|++..++........ .........+.+++|++||++++|||++|.|.+.|.
T Consensus 244 DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~ 323 (498)
T PRK08257 244 DQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPS 323 (498)
T ss_pred ccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHH
Confidence 9999999999988863 256788988877653211111 112334567999999999999999999999999875
Q ss_pred CCcHHHHHHHHHh-hCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 332 VGDPEEVQALENV-FCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 332 ~gD~~E~~Ai~~~-f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
.|..++..+ |+.....++.+...-...||+.+++|+.+++.++.+|+.+
T Consensus 324 ----~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~ 373 (498)
T PRK08257 324 ----AVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN 373 (498)
T ss_pred ----HHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc
Confidence 677777766 5543334566655555679999999999999999999864
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=152.30 Aligned_cols=288 Identities=15% Similarity=0.139 Sum_probs=178.0
Q ss_pred CCcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhh-cCC
Q psy1120 32 GDEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAH-TMD 109 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~-~~d 109 (883)
...|.|+|+|..+|.- .+.+++.+.+.+......... .|-. .. .||..|... .-.
T Consensus 3 ~~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~-~~i~--------~~--------------~Gi~~R~~~~~~~ 59 (338)
T PRK09258 3 YSNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPP-GQLE--------AL--------------TGIRERRWWPEGT 59 (338)
T ss_pred ccceEEEEEEecCCCccCcHHHHHHHhhhcccccCCCh-hHhh--------hh--------------cCceeEecCCCCC
Confidence 3568999999999985 577777766533211000000 0000 00 111111100 001
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cce
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPS 187 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps 187 (883)
....|+.+|+.+||+++|+++++++ .|++++..+++. . ...+.++...+|++ -+.
T Consensus 60 ~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~~~~------------------~-p~~a~~v~~~lgl~~~~~~ 116 (338)
T PRK09258 60 QLSDGAIAAGRKALAEAGIDPSDIG----LLINTSVCRDYL------------------E-PATACRVHHNLGLPKSCAN 116 (338)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------C-ChHHHHHHHHcCCCCCCce
Confidence 2357999999999999999988886 366766443321 1 13567899999996 378
Q ss_pred eeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEc
Q psy1120 188 YTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQ 267 (883)
Q Consensus 188 ~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~ 267 (883)
+.|.++|+|++.||+.|...|++|.++.+||+++|..... ....+. .+..++..+.+|+....++..||||+++||+
T Consensus 117 ~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~ 193 (338)
T PRK09258 117 FDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREI-VEATID--RLLAPETTREDFAQSFATLTLGSGAAAAVLT 193 (338)
T ss_pred eehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchh-ccchhh--hhccCccchhhhhhccceEEecccceEEEEe
Confidence 9999999999999999999999999999999999974332 111111 1222333335677777788999999999999
Q ss_pred ccccccceeEEEEeeeeccCCCCCCCCC------CCC--------HHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCC
Q psy1120 268 KSKDAKRVYARVVHAKTNCDGYKEQGIT------YPS--------GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333 (883)
Q Consensus 268 ~~~~A~~i~a~I~g~~~~~dg~~~~~~~------~p~--------~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~g 333 (883)
+.+.... ...+.+.....++....... ..+ .....++++++|+++|++++||||+-.|-.+.+.-
T Consensus 194 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~~~ 272 (338)
T PRK09258 194 RGSLHPR-GHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAAHT 272 (338)
T ss_pred cCCCCCC-cceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHHHH
Confidence 7543211 12333333222221111000 011 12334688899999999999999999997665533
Q ss_pred cHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHH
Q psy1120 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKV 377 (883)
Q Consensus 334 D~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~ 377 (883)
..+.+.++-. .+++.. +.+ .+||+.+|+=...|..+
T Consensus 273 -----~~~~~~lgl~-~~k~~~-~~~-~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 273 -----RAILKALGID-PEKVFT-TFP-TLGNMGPASLPITLAMA 308 (338)
T ss_pred -----HHHHHHhCCC-HHHcee-hHh-hhCCcHHhHHHHHHHHH
Confidence 3455555321 122222 333 78999999766666554
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.7e-14 Score=156.07 Aligned_cols=236 Identities=13% Similarity=0.153 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--ceeee
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSYTV 190 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~tv 190 (883)
.|+.|++++||+|||+++++|+. ++++.. .. . ....++..+|+++ |...|
T Consensus 26 ~L~~eA~~~Al~DAgl~~~dID~----~~~~~~-~~--------------------~---~~~~l~~~lGl~~~~~~~~v 77 (386)
T PRK07855 26 RLACEAVLAALDDAGLAPSDVDG----LVTFTM-DT--------------------N---PEIAVARALGIGELKFFSRI 77 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCE----EEEecC-cc--------------------c---cHHHHHHHCCCCCCcceeee
Confidence 48999999999999999888873 554321 00 0 0124888899976 45679
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEecc--ccccChh------------h---HHHHH-hcCCCC------------
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGC--NLCLHPY------------V---SLQFA-RLGVLS------------ 240 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~--~~~~~~~------------~---~~~~~-~~~~ls------------ 240 (883)
.++|+|+..+|..|++.|++|+||+|||.|+ +...... . ...+. ..|+..
T Consensus 78 ~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~y 157 (386)
T PRK07855 78 HYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAMLARRY 157 (386)
T ss_pred cCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999987 2110000 0 00000 111111
Q ss_pred -------------------------CCCCC--CCcccC--------------CCCcccccceEEEEEcccccccc---ee
Q psy1120 241 -------------------------PDGRC--KSFDEA--------------ANGYCRSEAVCIMYLQKSKDAKR---VY 276 (883)
Q Consensus 241 -------------------------~~g~~--~pfd~~--------------~~G~~~gEGa~~vvL~~~~~A~~---i~ 276 (883)
|.-.. +|++.+ -|....+||++++||.+.+.|++ ..
T Consensus 158 m~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~p 237 (386)
T PRK07855 158 MHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSAERARDLKQRP 237 (386)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecHHHHhhCCCCC
Confidence 11111 122211 34455699999999999988863 34
Q ss_pred EEEEeeeeccCCCCCC--C--CC-CCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-hCCC--
Q psy1120 277 ARVVHAKTNCDGYKEQ--G--IT-YPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-FCPG-- 348 (883)
Q Consensus 277 a~I~g~~~~~dg~~~~--~--~~-~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-f~~~-- 348 (883)
..|+|++..++..... . .. .........+++++|++||++++|||++|.|.+.|. .|...++.. |++.
T Consensus 238 v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~----~~l~~~E~lG~~~~Ge 313 (386)
T PRK07855 238 AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTP----FVLMQLEELGFCGRGE 313 (386)
T ss_pred EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcH----HHHHHHHHcCCCCCCc
Confidence 6899988755432100 0 00 011233458999999999999999999999999886 566666554 3221
Q ss_pred --------C---CCCeee---cccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 349 --------R---TTPLLI---GSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 349 --------~---~~~~~i---gs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
. ...++| |..+++ ||+. |+..++.++.+|+..
T Consensus 314 ~~~~v~~G~~~~~G~lPvN~sGGll~~-gh~~---G~~~i~E~~~QLrG~ 359 (386)
T PRK07855 314 AKDFIADGALELGGRLPINTHGGQLGE-AYIH---GMNGIAEAVRQLRGT 359 (386)
T ss_pred HHHHHHCCCcccCCcccccCCCccccc-Cchh---hHHHHHHHHHHHhCC
Confidence 1 135777 666663 7865 899999999999864
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.1e-13 Score=151.08 Aligned_cols=224 Identities=13% Similarity=0.209 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~t 189 (883)
...|+.+++.+||+++|+++++++ .+++++...++. ....+.++...+|++ .+.+.
T Consensus 53 ~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~-------------------~~~~a~~l~~~lg~~~~~~~~ 109 (325)
T PRK12879 53 TSDLAIKAAERALARAGLDAEDID----LIIVATTTPDYL-------------------FPSTASQVQARLGIPNAAAFD 109 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------------CChHHHHHHHHhCCCCCcEEE
Confidence 467899999999999999988876 366665443321 112567899999997 58899
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+.+|+|++.||+.|.+.|++|.++.|||+++|.+... + .++......+.||||+++||++.
T Consensus 110 v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~-----------~-------~~~~~~~~~~~GDgAaA~ll~~~ 171 (325)
T PRK12879 110 INAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKV-----------T-------DYTDRTTCILFGDGAGAVVLEAT 171 (325)
T ss_pred ECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------C-------CccccCceEEEeecceEEEEEec
Confidence 99999999999999999999999999999999973221 1 11112345789999999999987
Q ss_pred ccccceeEEEEeee--------eccCCCCC------CC-CCCCC--------HHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 270 KDAKRVYARVVHAK--------TNCDGYKE------QG-ITYPS--------GALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 270 ~~A~~i~a~I~g~~--------~~~dg~~~------~~-~~~p~--------~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
++...+.....+.. ....+... .. ....+ .....++++++|+++|++++||+|+-.|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h 251 (325)
T PRK12879 172 ENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPH 251 (325)
T ss_pred CCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 65333322111110 00000000 00 00001 1223468899999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 327 GTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 327 gtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
..+.. =..++.+.++-.. +++.. ....+||+.+|+-...|..+ ++++.+
T Consensus 252 ~~~~~-----~~~~~~~~lg~~~-~~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~ 300 (325)
T PRK12879 252 QANLR-----IIESLCEKLGIPM-EKTLV--SVEYYGNTSAATIPLALDLA---LEQGKI 300 (325)
T ss_pred CCCHH-----HHHHHHHHcCCCH-HHhhh--hHhhhCchHHHHHHHHHHHH---HHcCCC
Confidence 54432 2446666664211 22222 34789999999877777554 455544
|
|
| >KOG1406|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.7e-14 Score=139.87 Aligned_cols=243 Identities=17% Similarity=0.243 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeeecc
Q psy1120 114 IILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTVDS 192 (883)
Q Consensus 114 l~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv~t 192 (883)
++.|+...||.|+||.-++++..-+|.++|.+. ...|.-|..|++| |.+.|++
T Consensus 32 ~a~ea~tkal~da~ikys~vqqa~vgyvfgdst--------------------------cgqraiyevgmtgipi~nvnn 85 (408)
T KOG1406|consen 32 FAKEAITKALQDAGIKYSEVQQAVVGYVFGDST--------------------------CGQRAIYEVGMTGIPIYNVNN 85 (408)
T ss_pred HHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc--------------------------cchHHHHhccccCcceeeccC
Confidence 467899999999999988888777888887532 2345667889999 9999999
Q ss_pred cchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh------------------------------HHHH--------H
Q psy1120 193 ACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV------------------------------SLQF--------A 234 (883)
Q Consensus 193 acsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~------------------------------~~~~--------~ 234 (883)
.|+++..||.+|-+.|++|..|.+|+.|.+.|..-.. ...| .
T Consensus 86 ncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgnagkehme 165 (408)
T KOG1406|consen 86 NCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGNAGKEHME 165 (408)
T ss_pred ccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhhhHHHHHH
Confidence 9999999999999999999999999999986432100 0000 0
Q ss_pred hcCCC-----------CCCCCCCCcccCCCCc---------------------ccccceEEEEEcccccccc-----eeE
Q psy1120 235 RLGVL-----------SPDGRCKSFDEAANGY---------------------CRSEAVCIMYLQKSKDAKR-----VYA 277 (883)
Q Consensus 235 ~~~~l-----------s~~g~~~pfd~~~~G~---------------------~~gEGa~~vvL~~~~~A~~-----i~a 277 (883)
+.|-- .......|+++-.|-| ..+||+++.||.++.--++ --.
T Consensus 166 kygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~k~gl~~qav 245 (408)
T KOG1406|consen 166 KYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAV 245 (408)
T ss_pred HhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHH
Confidence 00000 0111233444433333 2489999999987644331 223
Q ss_pred EEEeeeeccCCCCC----CCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhh-CC-----
Q psy1120 278 RVVHAKTNCDGYKE----QGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVF-CP----- 347 (883)
Q Consensus 278 ~I~g~~~~~dg~~~----~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f-~~----- 347 (883)
+|.|..+..|.... .-+..-..+....+.++++++.|++|.||+.||.|.+..+ ++.+-.+||.-.- ++
T Consensus 246 eivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~-nelityealglcpegqg~~~v 324 (408)
T KOG1406|consen 246 EIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSA-NELITYEALGLCPEGQGGEFV 324 (408)
T ss_pred HHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccch-hhhhhHHHhcCCCCCCCceee
Confidence 46666665554211 1111123445678899999999999999999999999875 5566666765321 00
Q ss_pred CC-C----CCeeecccCCC--CCCCcccchhhHHHHHHHHhhc
Q psy1120 348 GR-T----TPLLIGSVKSN--IGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 348 ~~-~----~~~~igs~K~~--~GH~~~AsG~~~li~~~l~l~~ 383 (883)
.+ + .+..|.-.-+. -||+.||.|+++.+..+.+|+-
T Consensus 325 drgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg 367 (408)
T KOG1406|consen 325 DRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRG 367 (408)
T ss_pred ecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhh
Confidence 01 1 12334333333 3999999999999999999964
|
|
| >KOG1389|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-13 Score=140.38 Aligned_cols=233 Identities=18% Similarity=0.282 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHH-hhCC--CCceeee
Q psy1120 114 IILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSY-WLGV--NGPSYTV 190 (883)
Q Consensus 114 l~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~-~~~l--~Gps~tv 190 (883)
|+..+....+|+-+++|+.+.. |++|+.... |.. ....|++. +-|+ +-|.++|
T Consensus 64 Ll~~vl~a~ie~t~~dp~~igd----i~vG~vL~p------------------g~g--a~e~R~a~~~ag~P~tvpv~tv 119 (435)
T KOG1389|consen 64 LLAAVLRAVIEKTNLDPSLIGD----IVVGTVLAP------------------GSG--ASECRMAAFYAGFPETVPVRTV 119 (435)
T ss_pred HHHHHHHHHHhhcCCCHHHhcc----eeeeeccCC------------------Ccc--hHHHHHHHHHcCCCcccchhhh
Confidence 4555667778999999988765 555543221 111 22334444 4455 5699999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChh--h--------HHHHH-------hcCCCC-------------
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPY--V--------SLQFA-------RLGVLS------------- 240 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~--~--------~~~~~-------~~~~ls------------- 240 (883)
+.-|||||+|+..-+..|++|.+|+-|++|+|+|.+.+ . ...+. .+|..|
T Consensus 120 NRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~e 199 (435)
T KOG1389|consen 120 NRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREE 199 (435)
T ss_pred hhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhh
Confidence 99999999999999999999999999999999987642 0 00010 111111
Q ss_pred ----------------------------------CCCC-----------CCC-------------cccC-----CCCccc
Q psy1120 241 ----------------------------------PDGR-----------CKS-------------FDEA-----ANGYCR 257 (883)
Q Consensus 241 ----------------------------------~~g~-----------~~p-------------fd~~-----~~G~~~ 257 (883)
+.|. .|| |.++ .|..-.
T Consensus 200 qD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQv 279 (435)
T KOG1389|consen 200 QDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQV 279 (435)
T ss_pred hhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhc
Confidence 1110 111 2211 222335
Q ss_pred ccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCC
Q psy1120 258 SEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333 (883)
Q Consensus 258 gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~g 333 (883)
+||+++++|.+.+.|. .++++.+.+....-.....++. -+-+|.++++.+|+..+||||+|.+
T Consensus 280 SDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGiG------PavAIp~alk~aGL~v~did~FEIN------- 346 (435)
T KOG1389|consen 280 SDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGIG------PAVAIPKALKAAGLEVDDIDLFEIN------- 346 (435)
T ss_pred ccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHHHcCCC------chhhhHHHHHHcCCcccccceeehh-------
Confidence 8999999999988886 5899999887654433333332 3778999999999999999999987
Q ss_pred cHHHHHHHHHhhCCCC----CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 334 DPEEVQALENVFCPGR----TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 334 D~~E~~Ai~~~f~~~~----~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
|+.|-+.+|+..+ .+++.+....-.+||+.||+|...++-.+.-|+++-.
T Consensus 347 ---EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrgk 400 (435)
T KOG1389|consen 347 ---EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGK 400 (435)
T ss_pred ---HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhcc
Confidence 9888888886422 2345555555668999999999999999999988654
|
|
| >KOG1391|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=130.31 Aligned_cols=240 Identities=15% Similarity=0.206 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCcee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~ 188 (883)
++.|...++..||..+++.++.++...+|.++.++.... .++.++....|+ .-|.+
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI----------------------Yl~RHvGL~~GvP~e~pAL 85 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI----------------------YLARHVGLRVGVPKETPAL 85 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce----------------------EeeeccccccCCcCccCce
Confidence 345677889999999999999888644555544432110 122233333343 35899
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh---------------------HHH----HH---------
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV---------------------SLQ----FA--------- 234 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~---------------------~~~----~~--------- 234 (883)
+|+.-|.|+.++|-.+++.|.-|+++++|+||+|.|..... |.. +.
T Consensus 86 tiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~TAE 165 (396)
T KOG1391|consen 86 TINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMTAE 165 (396)
T ss_pred eehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhhhHH
Confidence 99999999999999999999999999999999998654210 000 00
Q ss_pred ----------------------------hcCCCC------------------CCCCCCC-------------cccCCCCc
Q psy1120 235 ----------------------------RLGVLS------------------PDGRCKS-------------FDEAANGY 255 (883)
Q Consensus 235 ----------------------------~~~~ls------------------~~g~~~p-------------fd~~~~G~ 255 (883)
..|... -|.+.|| |. .||.
T Consensus 166 nL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppvFk--KdG~ 243 (396)
T KOG1391|consen 166 NLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPVFK--KDGT 243 (396)
T ss_pred HhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCchhc--cCCe
Confidence 011100 0112221 21 2343
Q ss_pred c-------cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy1120 256 C-------RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIE 324 (883)
Q Consensus 256 ~-------~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve 324 (883)
+ .+||++++++.+++.-+ +++|+|.++..........++. | ..+|+.+|+.+|++..|||.||
T Consensus 244 VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIG-P-----vPAI~~vLKksGlkl~DiDl~E 317 (396)
T KOG1391|consen 244 VTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIG-P-----VPAISGVLKKSGLKLKDIDLVE 317 (396)
T ss_pred eeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhcccc-C-----cHHHHHHHHHcCCcccccceEE
Confidence 3 58999999999876554 5899999987655443444443 3 6789999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 325 AHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 325 ~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
.+-...+ ...|..+.+. -...++.|....-.+||++||||..-....+.-|+++-.
T Consensus 318 vNEAFAp-----Q~LAv~r~L~-ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~~ 373 (396)
T KOG1391|consen 318 VNEAFAP-----QYLAVERSLD-LDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRGG 373 (396)
T ss_pred echhhch-----HHHHHHHhhC-CChhhccccCceeeccCccccCcchhhHHHHHHHHHcCC
Confidence 9833332 2233334342 123467777777779999999999999999999987643
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.9e-12 Score=141.81 Aligned_cols=236 Identities=15% Similarity=0.089 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-C-ceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-G-PSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-G-ps~t 189 (883)
..|+.|++.+||+|||+++++++ +++.+. .+... .. ... ...++..+|+. + |...
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID----~~~~~~--~~~~~----------~~----~~~---~~~~~~~~G~~~~~~~~~ 81 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIG----FWCSGS--SDYLA----------GR----AFS---FISAIDSIGAVPPINESH 81 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEc--ccccc----------cc----ccc---hhhHHhhccCCCCCceEE
Confidence 46899999999999999999988 343332 11100 00 000 11234556663 3 4555
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hhh-HH------HHH-hcCC-------------CC-------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PYV-SL------QFA-RLGV-------------LS------- 240 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~~-~~------~~~-~~~~-------------ls------- 240 (883)
+++ +|..||+.|+.+|++|+||+|||.|++.+.. ... .. .+. ..|+ +.
T Consensus 82 v~~---~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e 158 (352)
T PRK07937 82 VEM---DAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEE 158 (352)
T ss_pred ecC---cHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHH
Confidence 554 6888999999999999999999999885421 000 00 000 0010 00
Q ss_pred ----------CCCCCCCccc-------------------CCCCcccccceEEEEEcccccccc---eeEEEEeeeeccCC
Q psy1120 241 ----------PDGRCKSFDE-------------------AANGYCRSEAVCIMYLQKSKDAKR---VYARVVHAKTNCDG 288 (883)
Q Consensus 241 ----------~~g~~~pfd~-------------------~~~G~~~gEGa~~vvL~~~~~A~~---i~a~I~g~~~~~dg 288 (883)
..+...|+.. .-|....+||++++||.+.+.|++ ..+.|+|++...+.
T Consensus 159 ~lA~vavk~r~nA~~NP~A~~rit~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~pv~I~g~~~~~~~ 238 (352)
T PRK07937 159 QMAEVAARSRADARRNPSAEPSISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERPAWITGIEHRIES 238 (352)
T ss_pred HHHHHHHHHHHHHhhCchhhccCCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCcEEEEEEEEeeCC
Confidence 0011112111 124445699999999999988863 34889999886654
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCee-ecccCCCCCCCc
Q psy1120 289 YKEQGITYPSGALQQRLLEDFYSE-CEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLL-IGSVKSNIGHSE 366 (883)
Q Consensus 289 ~~~~~~~~p~~~~~~~~i~~al~~-agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~-igs~K~~~GH~~ 366 (883)
.. +...+ .....++++++++ ||++|+|||++|.|...|. .|...++.. +-....|+. -|+.++ ||+.
T Consensus 239 ~~---~~~~d-~~~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~----~~l~~~e~l-Gl~g~~pvN~~GG~l~--ghp~ 307 (352)
T PRK07937 239 PS---LGARD-LTRSPSTALAAEAATGGDAGGVDVAELHAPFTH----QELILREAL-GLGDKTKVNPSGGALA--ANPM 307 (352)
T ss_pred cc---ccccc-cccHHHHHHHHHHhcCCCHHHCCEEEEeCCChH----HHHHHHHHc-CCCCCCCcCCCccchh--cCch
Confidence 32 11000 1112344556666 5999999999999998875 566555544 211222333 355565 9999
Q ss_pred ccchhhHHHHHHHHhhcC
Q psy1120 367 PASGVCSVTKVILAMENG 384 (883)
Q Consensus 367 ~AsG~~~li~~~l~l~~~ 384 (883)
||+|+..++.++.+|+.+
T Consensus 308 gatG~~~~~e~~~QL~g~ 325 (352)
T PRK07937 308 FAAGLERIGEAARHIWDG 325 (352)
T ss_pred hHHHHHHHHHHHHHHhcc
Confidence 999999999999999876
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.6e-12 Score=142.92 Aligned_cols=217 Identities=15% Similarity=0.239 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+++.+||+++|+++++++- +++++..+++. . ..+..+...+|+++ |++.
T Consensus 96 ~~~La~~Aa~~aL~~agi~~~dId~----li~~s~~~~~~---------------~-----~~a~~v~~~LG~~~~~~~d 151 (379)
T PLN02326 96 LTSLAVEAAKKALEMAGVDPEDVDL----VLLCTSSPDDL---------------F-----GSAPQVQAALGCTNALAFD 151 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEEeCCCCcc---------------C-----cHHHHHHHHhCCCCCceee
Confidence 5679999999999999999888763 55655433210 0 13557889999865 7889
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+.+|+|++.||++|.+.|++|.++.+||+|+|.+... + .|+...+..++||||+++||++.
T Consensus 152 v~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~-----------~-------~~~d~~~~~lfGDGAaAvlL~~~ 213 (379)
T PLN02326 152 LTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRY-----------V-------DWTDRGTCILFGDGAGAVVLQAC 213 (379)
T ss_pred ccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCC-----------C-------CccccCceEEEcceeEEEEEEEc
Confidence 99999999999999999999999999999999873211 1 12233456789999999999986
Q ss_pred cccc-ceeEE-EEeee-------eccCCC--------C---------CCCC--CCCCH--------HHHHHHHHHHHHHc
Q psy1120 270 KDAK-RVYAR-VVHAK-------TNCDGY--------K---------EQGI--TYPSG--------ALQQRLLEDFYSEC 313 (883)
Q Consensus 270 ~~A~-~i~a~-I~g~~-------~~~dg~--------~---------~~~~--~~p~~--------~~~~~~i~~al~~a 313 (883)
+... .+... +...+ ....+. . .... ....+ ....++++++|+++
T Consensus 214 ~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~ 293 (379)
T PLN02326 214 DDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKA 293 (379)
T ss_pred CCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHc
Confidence 5432 22211 11000 000000 0 0000 00011 11235788999999
Q ss_pred CCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHH
Q psy1120 314 EVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKV 377 (883)
Q Consensus 314 gl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~ 377 (883)
|++++|||++-.|-.+-. + ...+.+.++-. .+++. .++ ..+||+.+|+=...|..+
T Consensus 294 gl~~~dId~~v~Hq~n~~----~-~~~~~~~Lgl~-~ek~~-~~l-~~~GNt~sAsi~~~L~~~ 349 (379)
T PLN02326 294 GLTAESIDWLLLHQANQR----I-IDAVAQRLGIP-PEKVI-SNL-ANYGNTSAASIPLALDEA 349 (379)
T ss_pred CCCHHHCCEEEECCCCHH----H-HHHHHHHcCCC-HHHee-ecH-hhcCcHHHHHHHHHHHHH
Confidence 999999999999955433 2 23355555421 12232 234 589999999876666555
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.9e-12 Score=140.10 Aligned_cols=219 Identities=14% Similarity=0.230 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+++.+||+++|+++++++. |++|+...++. .+ .+..+...+|+++ +++.
T Consensus 51 ~~~la~~A~~~aL~~ag~~~~dId~----vi~~s~~~~~~---------------~~-----~~~~v~~~Lg~~~~~~~~ 106 (326)
T CHL00203 51 LTKLAAEAANKALDKAHMDPLEIDL----IILATSTPDDL---------------FG-----SASQLQAEIGATRAVAFD 106 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEEeCCCCCC---------------Cc-----hHHHHHHHhCCCCCceee
Confidence 4679999999999999999888873 67775443211 00 1346888889865 7889
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|..+|+|++.||+.|.+.|++|.++.+||+|+|.+..- + .++...+.++.||||+++||++.
T Consensus 107 v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~-----------~-------~~~~~~~~~~fgDga~A~ll~~~ 168 (326)
T CHL00203 107 ITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKW-----------I-------DWSDRKTCILFGDGAGAAIIGAS 168 (326)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCc-----------C-------CcccCCceEEEcceeeEEEEEEc
Confidence 99999999999999999999999999999999973321 1 11222356789999999999875
Q ss_pred ccccceeEEEEeeeeccCCCC------------C---CCCCCCC----------H-------HHHHHHHHHHHHHcCCCC
Q psy1120 270 KDAKRVYARVVHAKTNCDGYK------------E---QGITYPS----------G-------ALQQRLLEDFYSECEVDP 317 (883)
Q Consensus 270 ~~A~~i~a~I~g~~~~~dg~~------------~---~~~~~p~----------~-------~~~~~~i~~al~~agl~~ 317 (883)
+.. .+. ++....||.. . .....|. . ....++++++|+++|+++
T Consensus 169 ~~~-~~~----~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~ 243 (326)
T CHL00203 169 YEN-SIL----GFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI 243 (326)
T ss_pred CCC-CeE----EEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 431 221 1111111100 0 0000111 0 123457999999999999
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCC
Q psy1120 318 KNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIP 387 (883)
Q Consensus 318 ~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ip 387 (883)
+|||++-.|-.+.. =..++.+.++-.+ +.+. .+=...||+.+|+=...|-.+ ++++.+.
T Consensus 244 ~did~~~~hq~~~~-----~~~~~~~~lgl~~-~k~~--~~l~~~Gn~~sasi~~~L~~~---~~~g~~~ 302 (326)
T CHL00203 244 DEVDWFILHQANKR-----ILEAIANRLSVPN-SKMI--TNLEKYGNTSAASIPLALDEA---IQNNKIQ 302 (326)
T ss_pred HHCCEEEECCCCHH-----HHHHHHHHhCCCH-HHhh--hHHHhhCcHHHHHHHHHHHHH---HHhCCCC
Confidence 99999999955533 2445666664221 1221 123578999988766655544 4555543
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.8e-11 Score=133.84 Aligned_cols=213 Identities=14% Similarity=0.181 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEE-EccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-cee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVF-IGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~ 188 (883)
...|+.+++.+||+++|+++++++. ++ +++...++. . ...+.++...+|++. +.+
T Consensus 53 ~~~la~~Aa~~aL~~ag~~~~dId~----li~~~~~~~~~~------------------~-p~~a~~l~~~lGl~~~~~~ 109 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVDPAAIDV----VIYIGSEHKDYP------------------V-WSSAPKIQHEIGAKNAWAF 109 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEeccCCCCCC------------------C-CchHHHHHHHhCCCCcccc
Confidence 5679999999999999999988762 43 333222211 0 123567999999965 788
Q ss_pred eecccchhHHHHHHHHHHHHhc-CCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCc--ccccceEEEE
Q psy1120 189 TVDSACSSSLYALEHAYKSIRD-GHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGY--CRSEAVCIMY 265 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~-G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~--~~gEGa~~vv 265 (883)
.|..+|+|++.||..|++.|++ |.++.+||.+.+..... +. |+....++ ..||||+|+|
T Consensus 110 ~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~-----------~~-------~~~~~~~~~~~~GDgAaA~l 171 (339)
T PRK06840 110 DIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDL-----------VD-------YDNPRTRFMFNFAAGGSAAL 171 (339)
T ss_pred cccccchHHHHHHHHHHHHHhcCCCccEEEEEeecccccc-----------cC-------cCCCCeeeeccCCCceeEEE
Confidence 8999999999999999999999 99999999888762210 11 11112232 3699999999
Q ss_pred EcccccccceeEEEEeeeeccCCCCCC-------C------------------CCCCC----------HHHHHHHHHHHH
Q psy1120 266 LQKSKDAKRVYARVVHAKTNCDGYKEQ-------G------------------ITYPS----------GALQQRLLEDFY 310 (883)
Q Consensus 266 L~~~~~A~~i~a~I~g~~~~~dg~~~~-------~------------------~~~p~----------~~~~~~~i~~al 310 (883)
|++.+...++. +.....|+.... + ...+. .....++++++|
T Consensus 172 l~~~~~~~~il----~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 247 (339)
T PRK06840 172 LKKDAGKNRIL----GSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREAL 247 (339)
T ss_pred EEecCCCCceE----EEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHH
Confidence 99765433332 221111110000 0 00011 012357899999
Q ss_pred HHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHH
Q psy1120 311 SECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKV 377 (883)
Q Consensus 311 ~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~ 377 (883)
+++|++++|||++-.|-.+.. =...+.+.++-.. .+.. +...+||+.+|+=...|..+
T Consensus 248 ~~~gl~~~did~~~~h~~~~~-----~~~~~~~~Lgl~~-~~~~---~~~~~Gn~~sas~~~~L~~~ 305 (339)
T PRK06840 248 RKSGYTPKDIDYLAILHMKRS-----AHIALLEGLGLTE-EQAI---YLDEYGHLGQLDQILSLHLA 305 (339)
T ss_pred HHcCCCHHHCCEEEECCcCHH-----HHHHHHHHcCCCH-HHeE---eHHhccchhhhhHHHHHHHH
Confidence 999999999999988743322 2234555554211 1222 24589999988766666544
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.9e-11 Score=134.06 Aligned_cols=218 Identities=14% Similarity=0.173 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC-CCceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV-NGPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l-~Gps~t 189 (883)
...|+.+++.+||+++|+++++++ .|++|+...++. ....+.+++..+|+ +.|.++
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~~Id----~li~~~~~~~~~-------------------~~~~~~~i~~~lg~~~~~~~~ 104 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPDDIG----LLIVATESPIDK-------------------GKSAATYLAELLGLTNAEAFD 104 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------------CccHHHHHHHHcCCCCCceee
Confidence 467899999999999999988887 477776543211 11356789999999 569999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+.+|+|++.||..|++.|++|.++.+||+|+|.+..... +.+.++++.|||+++++|++.
T Consensus 105 v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~-------------------~~~~~~~~~gdgaaA~ll~~~ 165 (324)
T cd00827 105 LKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLD-------------------EGSALEPTLGDGAAAMLVSRN 165 (324)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhccc-------------------CCCCccccccCceEEEEEecC
Confidence 9999999999999999999999999999999998543221 234678999999999999987
Q ss_pred ccc--cceeEEEEeeeec--------cCCCCC--------CCCCCC---------CHHHHHHHHHHHHHHcCCCCCCccE
Q psy1120 270 KDA--KRVYARVVHAKTN--------CDGYKE--------QGITYP---------SGALQQRLLEDFYSECEVDPKNLAW 322 (883)
Q Consensus 270 ~~A--~~i~a~I~g~~~~--------~dg~~~--------~~~~~p---------~~~~~~~~i~~al~~agl~~~dI~~ 322 (883)
+.. .++.......... .++... ..+... .......+++++|+++|++ +||+|
T Consensus 166 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~i~~ 244 (324)
T cd00827 166 PGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS-EDIDY 244 (324)
T ss_pred cccccCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc-cccce
Confidence 652 1222211111100 000000 001000 1234567899999999999 99999
Q ss_pred EEEecCCC-CCCcHHHHHHHHHhhCCCCCCCeeec--ccCCCCCCCcccchhhHHHHH
Q psy1120 323 IEAHGTGT-KVGDPEEVQALENVFCPGRTTPLLIG--SVKSNIGHSEPASGVCSVTKV 377 (883)
Q Consensus 323 ve~hgtgt-~~gD~~E~~Ai~~~f~~~~~~~~~ig--s~K~~~GH~~~AsG~~~li~~ 377 (883)
+..|-.+- ..- ..+.+.++-. ..++... ..-..+||+.+|+-...|-.+
T Consensus 245 ~~~h~~~~~~~~-----~~~~~~l~~~-~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~ 296 (324)
T cd00827 245 FVPHQPNGKKIL-----EAVAKKLGGP-PEKASQTRWILLRRVGNMYAASILLGLASL 296 (324)
T ss_pred eeccCchHHHHH-----HHHHHHccch-HhhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence 99995543 211 1222222210 0111111 234678999988766666554
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.3e-11 Score=132.49 Aligned_cols=214 Identities=14% Similarity=0.177 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Ccee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~ 188 (883)
...|+.+|+.+||+|||+++++++ ++++++..+++.. ...+..+...+|++ -+.+
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID----~li~~s~~~~~~~-------------------p~~a~~v~~~LGl~~~~~~~ 106 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIG----AVYVGSESHPYAV-------------------KPTATIVAEAIGATPDLTAA 106 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCccc-------------------cchHHHHHHHcCCCCCceEE
Confidence 467999999999999999998887 3666654433211 12356788999985 3788
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
.|..+|+|++.||+.|...|++|.++.+||.+.|.+.. .++ +..-+..|||++++||++
T Consensus 107 dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~-------------~~~--------~~~~~~~GDGAaA~vl~~ 165 (345)
T TIGR00748 107 DLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQG-------------APG--------DALEYTAGAGGAAYIIGE 165 (345)
T ss_pred EHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc-------------CCC--------ccCcccCCCceEEEEEcc
Confidence 99999999999999999999999999999999997421 011 111255699999999986
Q ss_pred cccccceeEEEEeee-eccCCC---CCCCCCCC-----------CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCC
Q psy1120 269 SKDAKRVYARVVHAK-TNCDGY---KEQGITYP-----------SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333 (883)
Q Consensus 269 ~~~A~~i~a~I~g~~-~~~dg~---~~~~~~~p-----------~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~g 333 (883)
.+.. ..+.+.. ...|+. ...+...| -......+++++|+++|++++|||++-.|-.+-.
T Consensus 166 ~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~-- 239 (345)
T TIGR00748 166 KNTV----AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGK-- 239 (345)
T ss_pred CCcc----eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChH--
Confidence 4422 2222221 111110 00000001 0112237788999999999999999999944332
Q ss_pred cHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 334 D~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
=...+.+.++-. .+.+...-.-..+||+.+||=...|...+
T Consensus 240 ---~~~~~~~~lgl~-~ek~~~~~~~~~~GNt~sAsipl~L~~~~ 280 (345)
T TIGR00748 240 ---FYLVAARMLGFP-KEQVKPGLLTPRIGNTYSGATPVGLSAVL 280 (345)
T ss_pred ---HHHHHHHHcCCC-HHHeeccccccccCchhhhHHHHHHHHHH
Confidence 223345555321 11222211125789999998777776654
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.4e-11 Score=131.70 Aligned_cols=214 Identities=18% Similarity=0.218 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--cee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~ 188 (883)
...|+.+|+.+||+|||+++++++ .+++++..+++.. + ..+.++...+|++. +.+
T Consensus 51 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~~~~~------------------p-~~a~~v~~~Lgl~~~~~~~ 107 (347)
T PRK04262 51 TATIAVEAARNALKRAGIDPKEIG----AVYVGSESHPYAV------------------K-PTATIVAEALGATPDLTAA 107 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCccc------------------c-cHHHHHHHHcCCCCCceEE
Confidence 467999999999999999998887 3666654333211 1 13457888999964 678
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
.+..+|+|++.||+.|...|++|.++.+||.+.|.... .+... .-+..||||+++||.+
T Consensus 108 dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~~~~~--------~~~~~GDGA~A~ll~~ 166 (347)
T PRK04262 108 DLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------APGDA--------LEYTAAAGGAAFIIGK 166 (347)
T ss_pred EHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------CCCCC--------CCCcCCCCcEEEEEec
Confidence 89999999999999999999999999999999886210 11110 1133599999999987
Q ss_pred cccccceeEEEEeee-eccCCCCC---CC---------CCC-C-CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCC
Q psy1120 269 SKDAKRVYARVVHAK-TNCDGYKE---QG---------ITY-P-SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333 (883)
Q Consensus 269 ~~~A~~i~a~I~g~~-~~~dg~~~---~~---------~~~-p-~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~g 333 (883)
.+.. .+|.+.. ...|+... .+ +.. | ......++++++|+++|++++||+++-.|-.+...
T Consensus 167 ~~~~----~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~- 241 (347)
T PRK04262 167 EEVI----AEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKF- 241 (347)
T ss_pred Cccc----ceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHH-
Confidence 4432 2333321 11111100 00 000 0 11345678999999999999999999999444332
Q ss_pred cHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 334 D~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
...+.+.++-. .+++..+-+-..+||+.+|+=...|..++
T Consensus 242 ----~~~~~~~Lgl~-~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 242 ----PLRVAKMLGFT-KEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred ----HHHHHHHcCCC-HHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 22334444321 12222211236789999998777776543
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.1e-10 Score=127.22 Aligned_cols=214 Identities=17% Similarity=0.188 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+|+.+||+++|+++++++- +++++..+++.. ...+.+|...+|++. +++.
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~~Id~----li~~t~~~d~~~-------------------p~~a~~v~~~Lg~~~~~~~d 108 (326)
T PRK05963 52 LSDLAASAGDMALSDAGIERSDIAL----TLLATSTPDHLL-------------------PPSAPLLAHRLGLQNSGAID 108 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEECCCCCCCC-------------------CcHHHHHHHHhCCCCCceee
Confidence 4679999999999999999988863 667765544311 124568999999954 7888
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|..+|++++.||+.|...|++|. +.+||.++|.... .+.+ +....+++.||||+++||++.
T Consensus 109 i~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s~-----------~~~~-------~~~~~~~lfGDgA~A~ll~~~ 169 (326)
T PRK05963 109 LAGACAGFLYALVLADGFVRAQG-KPVLVVAANILSR-----------RINM-------AERASAVLFADAAGAVVLAPS 169 (326)
T ss_pred ccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhhc-----------cCCc-------cccCceEEEeecceEEEEEec
Confidence 99999999999999999999985 8899988886221 1111 112357889999999999975
Q ss_pred cccc-ceeEE-EEeeeec-------cCCCC--------CCC--CCCCC--------HHHHHHHHHHHHHHcCCCCCCccE
Q psy1120 270 KDAK-RVYAR-VVHAKTN-------CDGYK--------EQG--ITYPS--------GALQQRLLEDFYSECEVDPKNLAW 322 (883)
Q Consensus 270 ~~A~-~i~a~-I~g~~~~-------~dg~~--------~~~--~~~p~--------~~~~~~~i~~al~~agl~~~dI~~ 322 (883)
+... .+... +...+.. ..|.. ... +...+ .....++++++|+++|++++|||+
T Consensus 170 ~~~~~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~ 249 (326)
T PRK05963 170 AKANSGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDR 249 (326)
T ss_pred CCCCCceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 5432 22111 1110000 00000 000 00001 122346788999999999999999
Q ss_pred EEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHH
Q psy1120 323 IEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSV 374 (883)
Q Consensus 323 ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~l 374 (883)
+-.|-.+. .=...+.+.++-.. +++ + ..-..+||+.+|+=...|
T Consensus 250 ~~~h~~~~-----~~~~~~~~~l~l~~-~k~-~-~~l~~~Gn~~sas~~~~L 293 (326)
T PRK05963 250 FFPHQANA-----RIVDKVCETIGIPR-AKA-A-STLETYGNSSAATIPLSL 293 (326)
T ss_pred EEeCCCCH-----HHHHHHHHHcCCCH-HHh-h-hhHHhhCcHHHHHHHHHH
Confidence 99994442 23334444443211 111 1 122578998666544444
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.4e-11 Score=132.44 Aligned_cols=236 Identities=19% Similarity=0.239 Sum_probs=142.4
Q ss_pred HHHHHHHHHHCCCC--CCCCCCC-ceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--ceeee
Q psy1120 116 LEKTYEAVIDAGIN--PKSLRGS-KTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSYTV 190 (883)
Q Consensus 116 l~aa~eALedAG~~--~~~~~~~-~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~tv 190 (883)
.++..+++.|+++. +++++.. --.+++|+.... +.....++..++...|+.+ |.++|
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~------------------g~~~~~~ar~~a~~aGl~~~~p~~~V 88 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQA------------------GEQGQNIARQAALAAGLPGSVPAVTV 88 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheecccccc------------------ccccccHHHHHHHHcCCCCCCCceEE
Confidence 44556667777663 2234432 124666653221 1122346677889999975 99999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH---HH---------H---------------------HhcC
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS---LQ---------F---------------------ARLG 237 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~---~~---------~---------------------~~~~ 237 (883)
+.+|+||+.|++.|++.|++|++|++|+||+|.+.+.... .. + .+.|
T Consensus 89 ~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A~~~~~~yG 168 (392)
T COG0183 89 NRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYG 168 (392)
T ss_pred eccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999987665420 00 0 0000
Q ss_pred CCC------------------CC-C----------CCCCcccC----CCCcccccceEEEEEcccccccceeEEEEeeee
Q psy1120 238 VLS------------------PD-G----------RCKSFDEA----ANGYCRSEAVCIMYLQKSKDAKRVYARVVHAKT 284 (883)
Q Consensus 238 ~ls------------------~~-g----------~~~pfd~~----~~G~~~gEGa~~vvL~~~~~A~~i~a~I~g~~~ 284 (883)
.+ |. + ..++|+.+ .|.....||++++++...+.+. .++.|.+.
T Consensus 169 -itre~~d~~Av~sh~~A~~np~a~~~~eI~~~~v~~~~~~~dp~~r~d~~~~~dg~a~l~~a~~~~~g---~~tagnas 244 (392)
T COG0183 169 -ISREDQDEVAVKSHKNAAANPKAGFFDEITPEDVLNSPVVADPLRRLDCSPTSDGAAALVPAFEEVGG---TVTAGNAS 244 (392)
T ss_pred -CCHHHHHHHHHHHHHHHHhhHhcCCCCceeeEEecCCceecCCcccCCCCCChhhhcCceeccccCCc---eEEEeccc
Confidence 00 00 0 01122211 2444568899999888766521 23333321
Q ss_pred -ccCCC-------------------------CCCCCCCCCHHHHHHHHHHHHHHcCCC-CCCccEEEEecCCCCCCcHHH
Q psy1120 285 -NCDGY-------------------------KEQGITYPSGALQQRLLEDFYSECEVD-PKNLAWIEAHGTGTKVGDPEE 337 (883)
Q Consensus 285 -~~dg~-------------------------~~~~~~~p~~~~~~~~i~~al~~agl~-~~dI~~ve~hgtgt~~gD~~E 337 (883)
-+||. ...+++.+....-..++.++|+.+++. .+|+|++|.+ |
T Consensus 245 ~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~n----------E 314 (392)
T COG0183 245 GINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEKG----------E 314 (392)
T ss_pred ccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCceecC----------h
Confidence 11111 001111111133356677777777777 7788888766 6
Q ss_pred HHHHHHhhC--CCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 338 VQALENVFC--PGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 338 ~~Ai~~~f~--~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
..+....-. ..+..++.+...--.+||+.||||+..+..++.+|+.
T Consensus 315 afa~~~~~~~~~~G~~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~ 362 (392)
T COG0183 315 AFAAVALGVTKILGDLPVNPSGGAIALGHPIGATGARILVELARQLRG 362 (392)
T ss_pred HHHHHHHhhHHhcCCceeCCCcchhhcCCCccchHHHHHHHHHHHHhh
Confidence 665554321 1123455555555567999999999999999999987
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.4e-10 Score=120.06 Aligned_cols=175 Identities=13% Similarity=0.157 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTV 190 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv 190 (883)
...|+.+|+.+||++||+++++++. +++|.. .+ ..+.++.++..+|+ |.+.|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~----IIvGdl-~~---------------------Q~~~As~vA~~LGI--P~fdV 101 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDF----FLAGDL-LN---------------------QIITANFVARDLGI--PFLGL 101 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEeCC-CC---------------------cccHHHHHHHHhCC--CEEEE
Confidence 3569999999999999999998873 666631 10 01346678888886 88999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
+++|||++.||..|+..|++|.+|.|||++.+...+..... +..-.-|. .+.......++|||++||++.+
T Consensus 102 ~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqf-----r~p~eyg~----q~~~ta~~tgdGAGA~vl~~~~ 172 (327)
T TIGR02845 102 YGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQF-----RYPTEYGV----QKPPTAQWTVTGAGAVLLASTG 172 (327)
T ss_pred eccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhc-----cccccccc----CCCCeeeEEEcccEEEEEeecC
Confidence 99999999999999999999999999999998855432211 11101111 1234556789999999999876
Q ss_pred cccce----eEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 271 DAKRV----YARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 271 ~A~~i----~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
.-.+| .++|..+++. |.. .+-+--..+....|.+=|++.|.+|+|-|.|-.-
T Consensus 173 ~~~~i~~~t~gkv~d~g~~-d~~---nmgaamapaa~dti~~h~~d~~~~~~~yd~i~tg 228 (327)
T TIGR02845 173 GGPRITSATIGKVVDYGIT-DPL---DMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTG 228 (327)
T ss_pred CCCceEEEEEEEEEecCCC-Ccc---cchhhhhHHHHHHHHHHHHHcCCChhhccEEEec
Confidence 54443 3445555442 211 1222224466788999999999999999999853
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.5e-09 Score=119.76 Aligned_cols=233 Identities=14% Similarity=0.125 Sum_probs=138.8
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHH
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
+..+.....+....|+.+|+.+||+++|+++++|+ -|+++++++++ . ...+..+..
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~-------------------~-P~~a~~v~~ 152 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSGAH-------------------I-PGVDFRLVP 152 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCC-------------------C-CchHHHHHH
Confidence 33444444556678999999999999999998886 36666654432 1 124567888
Q ss_pred hhCCCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcc
Q psy1120 180 WLGVNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYC 256 (883)
Q Consensus 180 ~~~l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~ 256 (883)
.||++.- .+.+..+|++++.||..|...|++|....|||.++|....- +.+..+. .++..-.+.+
T Consensus 153 ~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~-----------~~~~d~~-~~~~~v~~~L 220 (399)
T PLN03171 153 LLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLL-----------FNGPDEG-CFQTLLNQGL 220 (399)
T ss_pred HhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeccccc-----------cCCCCcc-cHHhhhcccc
Confidence 9999743 45566799999999999999999999999999999983211 1111110 1112223678
Q ss_pred cccceEEEEEccccccc-ceeEEEEeeeeccCCC-------------CCCCCCCCC-HHHHHHHHHHHHHH---------
Q psy1120 257 RSEAVCIMYLQKSKDAK-RVYARVVHAKTNCDGY-------------KEQGITYPS-GALQQRLLEDFYSE--------- 312 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~-~i~a~I~g~~~~~dg~-------------~~~~~~~p~-~~~~~~~i~~al~~--------- 312 (883)
+||||+++||++.+... +.+..|.......++. ....+.... +....+.+++++++
T Consensus 221 FGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~ 300 (399)
T PLN03171 221 FGDGAAAVIVGADADAAERPLFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGD 300 (399)
T ss_pred ccCccEEEEEecCCCCCCCCceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99999999999865431 2222333222111110 000111111 23344445666654
Q ss_pred cCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHH
Q psy1120 313 CEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVT 375 (883)
Q Consensus 313 agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li 375 (883)
+|++++||+++ .|= +...=.+++.+.++-. .+++... .+-...|++-+||=...|-
T Consensus 301 ~g~~~~di~~~-~Hq-----~~~~il~~v~~~Lgl~-~ek~~~s~~~l~~yGNtssaSip~~L~ 357 (399)
T PLN03171 301 GGAEWNDLFWA-VHP-----GSSAILDQVDAALGLE-PEKLAASRRVLSDYGNMFGATVIFALD 357 (399)
T ss_pred cCCCcccceEE-EcC-----CcHHHHHHHHHHcCCC-HHHhHHHHHHHHHhCcchhhhHHHHHH
Confidence 58889999998 682 3334445566665421 1122210 1224578887766444443
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.3e-09 Score=122.52 Aligned_cols=228 Identities=14% Similarity=0.175 Sum_probs=143.9
Q ss_pred hhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC
Q psy1120 105 AHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN 184 (883)
Q Consensus 105 ~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~ 184 (883)
.....-...|+.+++.+||+++|+++++++ .++++++.+ + .....+.+|...+|++
T Consensus 79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id----~li~~s~~~-~-------------------~~P~~a~~i~~~lgl~ 134 (361)
T cd00831 79 DIALEEARELAEEAARGALDEAGLRPSDID----HLVVNTSTG-N-------------------PTPSLDAMLINRLGLR 134 (361)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECCCC-C-------------------CCCCHHHHHHHHhCCC
Confidence 333445678999999999999999988876 355555321 1 1123566899999996
Q ss_pred C--ceeeec-ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccce
Q psy1120 185 G--PSYTVD-SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAV 261 (883)
Q Consensus 185 G--ps~tv~-tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa 261 (883)
. +.+.|. .+|+|++.||+.|...|++|..+.|||.++|..... +.++. ..+..-..++.||||
T Consensus 135 ~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~-----------~~~~d---~~~~~~~~~lfGDga 200 (361)
T cd00831 135 PDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLW-----------YRGPD---HRSMLVGNALFGDGA 200 (361)
T ss_pred cccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccce-----------eCCCC---cHHHhhhhhhccCCc
Confidence 3 677898 899999999999999999999999999999974321 11110 000001357789999
Q ss_pred EEEEEccccccc---ceeEEEEeeeec--------------cCCCCCCCCC--CCC--HHHHHHHHHHHHHHc--CCCCC
Q psy1120 262 CIMYLQKSKDAK---RVYARVVHAKTN--------------CDGYKEQGIT--YPS--GALQQRLLEDFYSEC--EVDPK 318 (883)
Q Consensus 262 ~~vvL~~~~~A~---~i~a~I~g~~~~--------------~dg~~~~~~~--~p~--~~~~~~~i~~al~~a--gl~~~ 318 (883)
+|+||++.+... .....+.+.... ..+.. ..+. .+. .....++++++|+++ |++++
T Consensus 201 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~ 279 (361)
T cd00831 201 AAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMGWHLGEEGLT-FVLSRDVPRLVEKNLERVLRKLLARLGIGLFKL 279 (361)
T ss_pred eEEEEEcCCCcccccccceeeecccceeeecCCCceEEEEEcceEE-EEeChhHHHHHHHHHHHHHHHHhccccCCCccc
Confidence 999999865532 111222221110 00000 0000 011 224567889999999 99999
Q ss_pred CccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeee-cccCCCCCCCcccchhhHHHHH
Q psy1120 319 NLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLI-GSVKSNIGHSEPASGVCSVTKV 377 (883)
Q Consensus 319 dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~i-gs~K~~~GH~~~AsG~~~li~~ 377 (883)
||+++-.|--+-. =..++.+.++-. .+++.. -.+-..+||+.+||=...|..+
T Consensus 280 did~~~~H~~~~~-----i~~~v~~~lgl~-~~~~~~s~~~l~~~GN~~sasi~~~L~~~ 333 (361)
T cd00831 280 AFDHWCVHPGGRA-----VLDAVEKALGLS-PEDLEASRMVLRRYGNMSSSSVLYVLAYM 333 (361)
T ss_pred cceEEEECCCChH-----HHHHHHHHcCCC-HHHHHHHHHHHHHhCCchhccHHHHHHHH
Confidence 9999999955433 234455555421 111211 1223578999999866666555
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.8e-09 Score=118.89 Aligned_cols=235 Identities=14% Similarity=0.155 Sum_probs=145.3
Q ss_pred CCChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHH
Q psy1120 99 GVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVS 178 (883)
Q Consensus 99 ~i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 178 (883)
++..+....++-...|+.+|+.+||+++|+++++|+ -++++++.+.. . ..++.+|.
T Consensus 90 ~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId----~ii~~t~t~~~-------------------~-P~~a~~l~ 145 (393)
T PLN03172 90 SLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSGVD-------------------M-PGADYQLT 145 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCc-------------------C-chHHHHHH
Confidence 445555555566678999999999999999988876 25555543210 1 13677899
Q ss_pred HhhCCCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCc
Q psy1120 179 YWLGVNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGY 255 (883)
Q Consensus 179 ~~~~l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~ 255 (883)
..+|++.- .+.+..+|++++.||..|...+++|....+||.++|.+.-.. ..++.. ..+.--...
T Consensus 146 ~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~~~d~--~~~~~v~~~ 213 (393)
T PLN03172 146 KLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTF----------RGPSDT--HLDSLVGQA 213 (393)
T ss_pred HHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhh----------cccccc--cHHhhhccc
Confidence 99999763 356789999999999999999999999999999999843100 011100 000112346
Q ss_pred ccccceEEEEEccccccc--ceeEEEEeee----eccCCCCC-----CCC----C--CCC--HHHHHHHHHHHHHHcCCC
Q psy1120 256 CRSEAVCIMYLQKSKDAK--RVYARVVHAK----TNCDGYKE-----QGI----T--YPS--GALQQRLLEDFYSECEVD 316 (883)
Q Consensus 256 ~~gEGa~~vvL~~~~~A~--~i~a~I~g~~----~~~dg~~~-----~~~----~--~p~--~~~~~~~i~~al~~agl~ 316 (883)
++||||+++||+..+... +..-+|.++. ..+++... .++ . .|. .......+++.|++.|++
T Consensus 214 LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~ 293 (393)
T PLN03172 214 LFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGIN 293 (393)
T ss_pred hhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCC
Confidence 789999999998754321 1111333332 11221100 111 0 111 233456788899999999
Q ss_pred CCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHH
Q psy1120 317 PKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVT 375 (883)
Q Consensus 317 ~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li 375 (883)
..||+++-.|= |.+-=+.++.+.++-.. +.+... .+=...|++-+||=..-|-
T Consensus 294 ~~di~~~~~Hq-----gg~~Il~~v~~~Lgl~~-~~~~~s~~vl~~yGNtSSaSv~~vL~ 347 (393)
T PLN03172 294 DWNSIFWIAHP-----GGPAILDQVEIKLDLKE-EKLRATRHVLSDYGNMSSACVLFILD 347 (393)
T ss_pred ccccceEEecC-----CcHHHHHHHHHHcCCCH-HHHHHHHHHHHHhCccHHhHHHHHHH
Confidence 99999999993 33445566666664211 111110 1224568887776444443
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.4e-09 Score=119.62 Aligned_cols=224 Identities=11% Similarity=0.126 Sum_probs=136.5
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCc---
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGP--- 186 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gp--- 186 (883)
....|+.+|+.+||+++|+++++|+- +++++. .++. . ...+..|...||++.-
T Consensus 105 ~~~~La~~Aa~~aL~~ag~~~~dId~----lI~~t~-t~~~--------------~-----P~~a~~l~~~LGl~~~~~~ 160 (391)
T PLN03169 105 AVTQMAVEASLACIKEWGRPVSDITH----LVYVSS-SEAR--------------L-----PGGDLYLAKQLGLSPDVQR 160 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCE----EEEECc-CCCC--------------C-----CcHHHHHHHHhCcCCccee
Confidence 44679999999999999999988863 555554 2321 1 1245688899999642
Q ss_pred eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEE
Q psy1120 187 SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYL 266 (883)
Q Consensus 187 s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL 266 (883)
.+.+..+|++++.||..|...|++|....|||.++|.... . +. .++ ..+ ++......++||||+++||
T Consensus 161 ~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~-~----~~-----~~~-~~~-~~d~~~~~lFGDGAaA~vl 228 (391)
T PLN03169 161 VMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTIL-G----FR-----PPS-PDR-PYDLVGAALFGDGAAAVII 228 (391)
T ss_pred eecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChh-h----cc-----CCC-ccc-hhhhhhhhhccCceEEEEE
Confidence 4778999999999999999999999999999999997321 0 00 000 001 2222345678999999999
Q ss_pred cccccc--cceeEEEEeeee----cc----------CCCC-CCCCCCCC--HHHHHHHHHHHHHHcCCCCCCcc--EEEE
Q psy1120 267 QKSKDA--KRVYARVVHAKT----NC----------DGYK-EQGITYPS--GALQQRLLEDFYSECEVDPKNLA--WIEA 325 (883)
Q Consensus 267 ~~~~~A--~~i~a~I~g~~~----~~----------dg~~-~~~~~~p~--~~~~~~~i~~al~~agl~~~dI~--~ve~ 325 (883)
+..+.. ....-.+...+. .. +|.. ..+...|. ......+++++|+++|++++||| ++-.
T Consensus 229 ~~~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~ 308 (391)
T PLN03169 229 GADPIPVSESPFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAV 308 (391)
T ss_pred ecCCCcccCCcceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEe
Confidence 975433 111112221111 00 0000 00001111 22345678999999999999998 8888
Q ss_pred ecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHH
Q psy1120 326 HGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVT 375 (883)
Q Consensus 326 hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li 375 (883)
|=.+ .-=..++.+.++-. .+.+... .+=...||+-+|+=...|-
T Consensus 309 Hq~n-----~~il~~v~~~Lgl~-~ek~~~s~~~l~~~GNtsSasip~~L~ 353 (391)
T PLN03169 309 HPGG-----PAILNRLEKKLKLA-PEKLECSRRALMDYGNVSSNTIVYVLE 353 (391)
T ss_pred cCCC-----HHHHHHHHHHcCCC-HHHHHHHHHHHHHhCCchHhHHHHHHH
Confidence 9333 33444555555321 1122110 1123678888887444443
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.7e-09 Score=118.95 Aligned_cols=215 Identities=11% Similarity=0.094 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--cee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~ 188 (883)
...|+.+|+.+||+++|+++++++ -+++++..+++.. ...+.+|...+|++. +.+
T Consensus 60 ~~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~d~~~-------------------P~~a~~v~~~Lg~~~~~~~~ 116 (353)
T PRK12880 60 VSDLGKHAANTLLQGLNIDKNSLD----ALIVVTQSPDFFM-------------------PSTACYLHQLLNLSSKTIAF 116 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC-------------------CcHHHHHHHHhCCCCCceEE
Confidence 567999999999999999998886 3777776655421 246788999999963 678
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
-|..+|++++.||+.|...|++|..+ +|+.++|.... .+.+ +......++||||+++||++
T Consensus 117 di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~-----------~~~~-------~d~~~~~lFGDGAaA~vl~~ 177 (353)
T PRK12880 117 DLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSK-----------FIHP-------KNMNLAPIFGDGVSATLIEK 177 (353)
T ss_pred ehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhc-----------cCCc-------ccCCceeeecccceEEEEEe
Confidence 89999999999999999999999999 88888776221 1111 11223467899999999986
Q ss_pred cccccceeEEEEeeeec-------cCCCCC--C------C------------CCCCCH-------HHHHHHHHHHHHHcC
Q psy1120 269 SKDAKRVYARVVHAKTN-------CDGYKE--Q------G------------ITYPSG-------ALQQRLLEDFYSECE 314 (883)
Q Consensus 269 ~~~A~~i~a~I~g~~~~-------~dg~~~--~------~------------~~~p~~-------~~~~~~i~~al~~ag 314 (883)
.+....+ ..+..-+.. ..+... . . +..... .....+++++|+++|
T Consensus 178 ~~~~~~~-~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~g 256 (353)
T PRK12880 178 TDFNEAF-FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSK 256 (353)
T ss_pred cCCCCce-EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5433221 111111100 000000 0 0 000001 112468899999999
Q ss_pred CCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHH
Q psy1120 315 VDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVT 375 (883)
Q Consensus 315 l~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li 375 (883)
++++|||++-.| .+..-=.+++.+.++-.. +++. ..+-...|++-+||=...|-
T Consensus 257 l~~~did~~v~H-----Q~~~~i~~~i~~~Lgl~~-ek~~-~~~l~~~GNtssasip~~L~ 310 (353)
T PRK12880 257 VDEKDIAFHLFH-----QSNAYLVDCIKEELKLND-DKVP-NFIMEKYANLSACSLPALLC 310 (353)
T ss_pred CCHHHCCEEEEC-----CCCHHHHHHHHHHhCCCH-HHhh-hhhHHhhCCHHHHHHHHHHH
Confidence 999999999999 444556667777775221 1221 11124568877666444443
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.4e-09 Score=118.81 Aligned_cols=299 Identities=13% Similarity=0.142 Sum_probs=172.2
Q ss_pred CcEEEEecceeccCC-CCHHHHHHHHhcCC-----CcccC-CCcccccCCCCCCCCCCccccc-cCCCCCcccC-----C
Q psy1120 33 DEICITGIAGVFPDS-TDVRDFGEKLNNKV-----DLISD-DDRRWKLGKEHPEIPQRTGKLY-EVNKFDAAFF-----G 99 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~-----~~~~~-~~~~~~~~~~~~~~~~~~g~~~-~~~~fD~~~f-----~ 99 (883)
-+..|.|+|...|.- ...+++++.+.+-- ..... ...-++.. ....|.-.+. ++...++.++ +
T Consensus 19 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s----gI~~R~~~~~~~~~~~~~~~~~~~~p~ 94 (401)
T PLN03170 19 GPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKS----QIRKRYMHLTEEYLAENPNMCAYMAPS 94 (401)
T ss_pred CCeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhC----CCCceeEeccccchhhCccccccCCCC
Confidence 457799999999985 56666777664321 11110 00001111 1111111111 1111122222 3
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHH
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
+..+.....+-.-.|+.+|+.+||+++|+++++|+- +++.++.+. . . -.++.+|..
T Consensus 95 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~----lI~~T~Tg~-~------------------~-Ps~a~~l~~ 150 (401)
T PLN03170 95 LDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITH----LVFCTTSGV-D------------------M-PGADYQLTK 150 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE----EEEEccCCC-C------------------C-ChHHHHHHH
Confidence 455555555556689999999999999999888762 555543221 0 1 236778999
Q ss_pred hhCCCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcc
Q psy1120 180 WLGVNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYC 256 (883)
Q Consensus 180 ~~~l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~ 256 (883)
.||++.- .+.+..+|++++.||..|...+++|....|||.++|....- |. .++. .+ .+......+
T Consensus 151 ~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~-----~~-----~~~~-~~-~~~~~~~~L 218 (401)
T PLN03170 151 MLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVT-----FR-----GPSE-SH-LDSMVGQAL 218 (401)
T ss_pred HhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhc-----cC-----Cccc-ch-hhhhhhhhh
Confidence 9999753 57899999999999999999999999999999999984311 00 0110 00 111223457
Q ss_pred cccceEEEEEccccccc--ceeEEEEeeeec----cCCCCC-----CCC----C--CCC--HHHHHHHHHHHHHHcCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK--RVYARVVHAKTN----CDGYKE-----QGI----T--YPS--GALQQRLLEDFYSECEVDP 317 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~--~i~a~I~g~~~~----~dg~~~-----~~~----~--~p~--~~~~~~~i~~al~~agl~~ 317 (883)
+||||+++||++.+... +...++.+.... ..+... .++ . .|. .......++++|+++|+++
T Consensus 219 FGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~ 298 (401)
T PLN03170 219 FGDGAAAVIVGADPDERVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITD 298 (401)
T ss_pred hhceeEEEEEecCCcccccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 89999999998754321 111233322110 001000 111 0 011 2334568889999999999
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeee-cccCCCCCCCcccchhhHHHHH
Q psy1120 318 KNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLI-GSVKSNIGHSEPASGVCSVTKV 377 (883)
Q Consensus 318 ~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~i-gs~K~~~GH~~~AsG~~~li~~ 377 (883)
+||+++-.|=- .+.=++++.+.++-.. +++.. -.+-...||+-+|+=...|-+.
T Consensus 299 ~di~~~v~Hqg-----g~~il~~v~~~Lgl~~-~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 299 YNSIFWVAHPG-----GPAILDQVEAKVGLEK-ERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred cccCeEEecCC-----cHHHHHHHHHHcCCCh-HHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 99999999933 3344556666664211 11110 0122467898888755555554
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.01 E-value=1e-08 Score=109.24 Aligned_cols=175 Identities=13% Similarity=0.190 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTV 190 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv 190 (883)
...|+.+|+.+||++||+++++++- +|+|... + ..+.++.++..+|+ |.+-|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~----lI~Gdll-~---------------------Q~~sAs~vA~~LGI--Pa~dV 107 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDY----LLAGDLL-N---------------------QIISANFAARELGI--PFLGL 107 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEECCC-C---------------------CcchHHHHHHHhCC--cEEEE
Confidence 3569999999999999999998873 6666420 0 01345667777876 99999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
+++|||+..||.+|+..|++|.+|.+||++.+.+.+...-+ +.=-..|.-|| ..--..+.|+|++||.+..
T Consensus 108 ~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqf-----r~P~eyg~qrp----~taqwtvtGAGA~i~~~~~ 178 (337)
T PRK08304 108 YGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQF-----RFPTEYGGQRP----PTAQWTVTGAGAVLLSREG 178 (337)
T ss_pred eccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhc-----cCchhccccCC----CcceEEeeccEEEEEecCC
Confidence 99999999999999999999999999999998755432111 11011122232 2234568999999998765
Q ss_pred cccce----eEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 271 DAKRV----YARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 271 ~A~~i----~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
.-.+| .++|..+++. |.. .+-+--..+....|.+=|++.|.+|+|-|.|-.-
T Consensus 179 ~~~~i~~~t~Gkv~D~g~~-d~~---nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tG 234 (337)
T PRK08304 179 SGPRITHATIGKVVDLGIK-DPN---DMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTG 234 (337)
T ss_pred CCceEEEEeEEEEEecCCC-Ccc---cchhhhhHHHHHHHHHHHHHcCCChhhccEEEEc
Confidence 43332 3444444432 211 1222224466788999999999999999999853
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.3e-08 Score=114.58 Aligned_cols=235 Identities=13% Similarity=0.142 Sum_probs=143.9
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHH
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
+..+.....+-...|+.+|+.+||+++|+++++|+- +++.++.+. . . ..++.+|..
T Consensus 91 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~----li~~t~t~~---------------~----~-P~~a~~l~~ 146 (391)
T PLN03173 91 LDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITH----LVFCTTSGV---------------D----M-PGADYQLTK 146 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE----EEEEccCCC---------------c----c-cHHHHHHHH
Confidence 344444445556689999999999999999888762 555544321 0 1 236778999
Q ss_pred hhCCCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcc
Q psy1120 180 WLGVNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYC 256 (883)
Q Consensus 180 ~~~l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~ 256 (883)
.+|++.- .+.+..+|++++.||..|.+.++++....|||.++|.+.... ..++.. ..+.--...+
T Consensus 147 ~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~~~d~--~~~~~v~~~L 214 (391)
T PLN03173 147 LLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF----------RGPSDT--HLDSLVGQAL 214 (391)
T ss_pred HhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhh----------CCcccc--chhhhhhhhh
Confidence 9999763 456799999999999999999999999999999999833110 011110 0011123467
Q ss_pred cccceEEEEEcccccc--cceeEEEEeee----eccCCCCC-----CC----C--CCCC--HHHHHHHHHHHHHHcCCCC
Q psy1120 257 RSEAVCIMYLQKSKDA--KRVYARVVHAK----TNCDGYKE-----QG----I--TYPS--GALQQRLLEDFYSECEVDP 317 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A--~~i~a~I~g~~----~~~dg~~~-----~~----~--~~p~--~~~~~~~i~~al~~agl~~ 317 (883)
+||||+++||+..+.. .+..-++.++. ..+++... .+ + ..|. .......++++|++.|+++
T Consensus 215 FGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~ 294 (391)
T PLN03173 215 FGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISD 294 (391)
T ss_pred hcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 8999999999864321 11111333221 11111100 01 0 1121 2345567889999999999
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHHH
Q psy1120 318 KNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVTK 376 (883)
Q Consensus 318 ~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li~ 376 (883)
+||+++-.|--| +-=++++.+.++-.. +++... .+=...|++-+||=..-|-+
T Consensus 295 ~di~~~v~Hqgg-----~~Il~~v~~~LgL~~-ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 295 WNSLFWIAHPGG-----PAILDQVEAKLALKP-EKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred cccCeEEECCCc-----HHHHHHHHHHcCCCh-HHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 999999999444 345556666664211 112110 12345688877764444444
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.2e-08 Score=112.90 Aligned_cols=233 Identities=10% Similarity=0.133 Sum_probs=142.1
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHH
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
+..+.....+-...|+.+|+.+||+++|+++++|+ -++++++++.. . ..++.+|..
T Consensus 90 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg~~-------------------~-Ps~a~~l~~ 145 (389)
T PLN03168 90 LNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT----HIVFATTSGVN-------------------M-PGADHALAK 145 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCC-------------------C-ccHHHHHHH
Confidence 34444455555678999999999999999998886 36666654311 1 125778999
Q ss_pred hhCCCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcc
Q psy1120 180 WLGVNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYC 256 (883)
Q Consensus 180 ~~~l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~ 256 (883)
.||++.- .+.+..+|++++.||..|...|++|....|||.++|.++. .+. .++. ...|..-....
T Consensus 146 ~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~-----~~~-----~~~~--~~~~~~~~~~L 213 (389)
T PLN03168 146 LLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAV-----TYR-----APSE--NHLDGLVGSAL 213 (389)
T ss_pred HhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhh-----hcc-----Cccc--ccHHHHhcccc
Confidence 9999752 5889999999999999999999999999999999998432 010 0000 00111124567
Q ss_pred cccceEEEEEccccccc---ceeEEEEeee-e--ccCCCCC-----CCC----CC--CC--HHHHHHHHHHHHHHcCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK---RVYARVVHAK-T--NCDGYKE-----QGI----TY--PS--GALQQRLLEDFYSECEVDP 317 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~---~i~a~I~g~~-~--~~dg~~~-----~~~----~~--p~--~~~~~~~i~~al~~agl~~ 317 (883)
+||||||+||+..+... .++....... . ..++... .++ .. |. .......++++++..|+..
T Consensus 214 FGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~ 293 (389)
T PLN03168 214 FGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD 293 (389)
T ss_pred ccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 89999999999754321 1222222111 0 0111100 011 10 11 1234566777778888887
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHH
Q psy1120 318 KNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSV 374 (883)
Q Consensus 318 ~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~l 374 (883)
.|++++-.|=- .+-=++++.+.++-. .+.+... .+-...|++-+||=..-|
T Consensus 294 ~d~~~~v~Hqg-----g~~Il~~v~~~Lgl~-~ek~~~s~~vl~~yGNtSSaSv~~vL 345 (389)
T PLN03168 294 WNEMFWAVHPG-----GPAILDQVEAKLKLT-KDKMQGSRDILSEFGNMSSASVLFVL 345 (389)
T ss_pred cccceEEecCC-----cHHHHHHHHHHcCCC-HHHHHHHHHHHHHhCccHhhhHHHHH
Confidence 88888889933 344555666666421 1122210 123456888777644443
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.5e-08 Score=109.70 Aligned_cols=214 Identities=14% Similarity=0.096 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--ceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~t 189 (883)
..|+.+|+.+||+++ ++++|+ -+++|+..+++.. -..+..|...||+++ +.+-
T Consensus 50 ~~la~~Aa~~aL~~a--~~~~Id----~li~~t~s~~~~~-------------------~s~a~~v~~~Lgl~~~~~~~d 104 (379)
T TIGR01835 50 VTMAASAAKPILDRN--DKQKID----MVIFGTESGIDQS-------------------KAAAVYVHGLLGLQPFCRSFE 104 (379)
T ss_pred HHHHHHHHHHHHHhC--CHhhCC----EEEEEeCCCCCCC-------------------CCHHHHHHHHhCCCCCceEEE
Confidence 579999999999998 666665 3677776543211 136778999999964 7889
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
+..+|+|++.||+.|...|++|..+.|||.++|.... . . ....-...|+||+|+||.+.
T Consensus 105 v~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~----------~---~--------~~~~~~~~GdGA~A~Ll~~~ 163 (379)
T TIGR01835 105 LKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKY----------G---L--------ESPGEPTQGAGAVAMLVSAD 163 (379)
T ss_pred eccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhc----------c---c--------CCCCCccccCccEEEEEecC
Confidence 9999999999999999999999999999999986110 0 0 01122457999999999864
Q ss_pred ccccceeEEEEeeeecc-CC---CCCCCCCCC--C--------HHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcH
Q psy1120 270 KDAKRVYARVVHAKTNC-DG---YKEQGITYP--S--------GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDP 335 (883)
Q Consensus 270 ~~A~~i~a~I~g~~~~~-dg---~~~~~~~~p--~--------~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~ 335 (883)
. .+...-.+..... +. ....+...| + ......++++.++++|++++||+|+-.|-..+.++-
T Consensus 164 ~---~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~- 239 (379)
T TIGR01835 164 P---KLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGL- 239 (379)
T ss_pred C---CeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHH-
Confidence 2 1221111111111 11 011111112 1 113457888899999999999999999976555432
Q ss_pred HHHHHHHHhhCCCCCC---Ceee-----cccCCCCCCCcccchhhHHHHHH
Q psy1120 336 EEVQALENVFCPGRTT---PLLI-----GSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 336 ~E~~Ai~~~f~~~~~~---~~~i-----gs~K~~~GH~~~AsG~~~li~~~ 378 (883)
+++..++...... .+.- --.-..+||+.+||=...|..++
T Consensus 240 ---k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l 287 (379)
T TIGR01835 240 ---KALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLL 287 (379)
T ss_pred ---HHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHH
Confidence 1222222100000 0000 01234789999998777776553
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >KOG1392|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.6e-09 Score=108.09 Aligned_cols=241 Identities=20% Similarity=0.240 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceeee
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYTV 190 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~tv 190 (883)
.|..++....|+.-.++.+.++- +++|+.-.+. -.+.+|...+..-|+ +-|..||
T Consensus 68 dlar~al~~ll~kt~lpke~~dy----ii~gtviqev-------------------ktsniareaal~agfsdktpahtv 124 (465)
T KOG1392|consen 68 DLAREALKALLEKTKLPKEQLDY----IICGTVIQEV-------------------KTSNIAREAALLAGFSDKTPAHTV 124 (465)
T ss_pred HHHHHHHHHHHHhccCCHHHhce----eeehhhHHHH-------------------hcchHHHHHHHhcCCCCCCcccee
Confidence 35566667778888887776663 5666532111 112344445555566 5699999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH------------------------HHHhcCCCCCC----
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL------------------------QFARLGVLSPD---- 242 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~------------------------~~~~~~~ls~~---- 242 (883)
.-+|-|+-+|+..+..+|..|.||++++||||.+.+...-. ..-+..+|+|+
T Consensus 125 tmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nflapelpav 204 (465)
T KOG1392|consen 125 TMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFLAPELPAV 204 (465)
T ss_pred eeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhccCcCcchh
Confidence 99999999999999999999999999999999876532110 00001111111
Q ss_pred --------------------------------------------------------C-----------------------
Q psy1120 243 --------------------------------------------------------G----------------------- 243 (883)
Q Consensus 243 --------------------------------------------------------g----------------------- 243 (883)
|
T Consensus 205 aefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirvssle~laklk 284 (465)
T KOG1392|consen 205 AEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRVSSLEKLAKLK 284 (465)
T ss_pred eeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCcccCCHHHHhhcC
Confidence 0
Q ss_pred --CCCCcc--cCCCCcccccceEEEEEccccccc----ceeEEEEeee-eccCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q psy1120 244 --RCKSFD--EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAK-TNCDGYKEQGITYPSGALQQRLLEDFYSECE 314 (883)
Q Consensus 244 --~~~pfd--~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~-~~~dg~~~~~~~~p~~~~~~~~i~~al~~ag 314 (883)
..+||. ..+|...+-||+.+.+++.++.|. ++.|.++.+- +.+|.. ..-+..| .-+|.+.|++||
T Consensus 285 pafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpk-dqlllgp-----ay~ipkll~kag 358 (465)
T KOG1392|consen 285 PAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPK-DQLLLGP-----AYVIPKLLDKAG 358 (465)
T ss_pred chhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCch-hheeccc-----ccccHHHHHHcC
Confidence 001111 113444457888888888888775 4666677653 445542 2223333 567899999999
Q ss_pred CCCCCccEEEEecCCCCCCcHHHHHHHH-HhhCC---CCC--------CCeeecccCCCCCCCcccchhhHHHHHHHHhh
Q psy1120 315 VDPKNLAWIEAHGTGTKVGDPEEVQALE-NVFCP---GRT--------TPLLIGSVKSNIGHSEPASGVCSVTKVILAME 382 (883)
Q Consensus 315 l~~~dI~~ve~hgtgt~~gD~~E~~Ai~-~~f~~---~~~--------~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~ 382 (883)
++..|||.+|.|-...-. =.....|+. +-|+. ++. .++..-...-.|||+.||.|+.-...++--|+
T Consensus 359 ltlkdid~feiheafagq-ilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~anrl~ 437 (465)
T KOG1392|consen 359 LTLKDIDVFEIHEAFAGQ-ILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSANRLK 437 (465)
T ss_pred CcccccchhhhHHHHhHH-HHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHhHHH
Confidence 999999999999322100 000111221 12321 111 11222223345899999999998888877774
Q ss_pred c
Q psy1120 383 N 383 (883)
Q Consensus 383 ~ 383 (883)
+
T Consensus 438 ~ 438 (465)
T KOG1392|consen 438 E 438 (465)
T ss_pred h
Confidence 3
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.2e-08 Score=109.11 Aligned_cols=93 Identities=27% Similarity=0.423 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
..|+.+++.++|+++|+++++++ .|++|+..+... ...++..++...|| +-|.++
T Consensus 27 ~~L~~~a~~~al~~~~i~~~~Id----~v~~G~~~~~~~-------------------g~~~ar~~~l~aGl~~~vp~~~ 83 (264)
T PF00108_consen 27 EDLAAEAVKAALERAGIDPEDID----AVIVGNVLQEGE-------------------GQNIARQAALAAGLPESVPATT 83 (264)
T ss_dssp HHHHHHHHHHHHHHHTSHGGGEE----EEEEE-SSSCTT-------------------TCHHHHHHHHHTTS-TTSEEEE
T ss_pred HHHHHHHHHHHHHhcccchhhhh----hcCccccccccc-------------------chhhhhhhhhhcccccccceee
Confidence 34889999999999999998887 488887654321 12355667777787 459999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccCh
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHP 227 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~ 227 (883)
|+.+|+||+.||++|++.|++|+.|++||||+|.+...
T Consensus 84 V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 84 VNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRV 121 (264)
T ss_dssp EE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTS
T ss_pred ehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccc
Confidence 99999999999999999999999999999999997654
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.2e-07 Score=105.07 Aligned_cols=289 Identities=13% Similarity=0.167 Sum_probs=162.7
Q ss_pred CcEEEEecceeccCC---CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhh--hhc
Q psy1120 33 DEICITGIAGVFPDS---TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQ--AHT 107 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g---~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~--~~~ 107 (883)
++|..+-++|--|.. .+.+.|-+....-. .+++..-+|-. ..-.+.| +.+-..+-+.++.++++. ...
T Consensus 112 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~f~~-----~~~~~sg-~g~~ty~P~~~~~~~~~~~~~~~ 184 (521)
T PLN02854 112 KPVYLVDFACYKPEDERKISVDSFLTMTEENG-SFEDETVQFQR-----RISTRSG-LGDETYLPRGITSRPPNLCMEEA 184 (521)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcC-CCCHHHHHHHH-----HHHHhcC-CCCccccCccccCCCCcchHHHH
Confidence 569999999998875 35677766654221 11110000000 0001111 112233344444455532 222
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-- 185 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-- 185 (883)
.+-....+..++.++|+++|+++++|+- +++. +++++. ...++.+|...+|++.
T Consensus 185 r~ea~~v~~~~~~~lL~kaGi~p~dID~----LIv~-cS~~~p-------------------~PSlAa~I~n~LGlr~~i 240 (521)
T PLN02854 185 RAEAEAVMFGALDSLFSKTGVKPRDIGI----LIVN-CSLFNP-------------------TPSLSAMIVNHYKLRTDI 240 (521)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCE----EEEE-CCCCCC-------------------CCCHHHHHHHHhCCCCCc
Confidence 3344567777888999999999988762 4443 323210 1235778999999973
Q ss_pred ceeeec-ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCC---Ccccccce
Q psy1120 186 PSYTVD-SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAAN---GYCRSEAV 261 (883)
Q Consensus 186 ps~tv~-tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~---G~~~gEGa 261 (883)
.++-+. .|||+++.||+.|.+.|+.|....|||.++|.+. ...+. | +.... ...+||||
T Consensus 241 ~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S-~~~y~-----------g-----~Drs~lv~~~LFgDGA 303 (521)
T PLN02854 241 KSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT-LNWYF-----------G-----NDRSMLLCNCIFRMGG 303 (521)
T ss_pred eEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee-cCCCC-----------C-----Cchhhhcceeeeccce
Confidence 578888 7999999999999999999999999999999854 11000 0 11122 45789999
Q ss_pred EEEEEcccc-ccc----ceeEEEEeeeeccC--------------CCCCCCC--CCCC--HHH-----------------
Q psy1120 262 CIMYLQKSK-DAK----RVYARVVHAKTNCD--------------GYKEQGI--TYPS--GAL----------------- 301 (883)
Q Consensus 262 ~~vvL~~~~-~A~----~i~a~I~g~~~~~d--------------g~~~~~~--~~p~--~~~----------------- 301 (883)
||+||++.+ +.. ++...++ +....| |.....+ ..|. +..
T Consensus 304 AAvlLs~~~~~~~~~k~~L~~~v~-t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se 382 (521)
T PLN02854 304 AAVLLSNKARDRKRSKYQLVHTVR-THKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSE 382 (521)
T ss_pred eEEEEecccccccccchheeeEEE-EEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHH
Confidence 999998743 211 1111111 111111 1000000 0010 000
Q ss_pred ----HHHHHHHHHHHcCCCC------CCccEEEEecCCCCCCcHHHHHHHHHhhCCCC--CCCeeecccCCCCCCCcccc
Q psy1120 302 ----QQRLLEDFYSECEVDP------KNLAWIEAHGTGTKVGDPEEVQALENVFCPGR--TTPLLIGSVKSNIGHSEPAS 369 (883)
Q Consensus 302 ----~~~~i~~al~~agl~~------~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~--~~~~~igs~K~~~GH~~~As 369 (883)
....+++.|.++|+++ .||+++..|--|. .=+.++.+.++-.. .++.. .+-..+|++-++|
T Consensus 383 ~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr-----~IId~v~k~LgL~~~~~e~sr--~tL~rfGNTSSAS 455 (521)
T PLN02854 383 QFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGR-----AVLDELQKNLQLSDWHMEPSR--MTLHRFGNTSSSS 455 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCH-----HHHHHHHHHcCCCcccccchH--HHhhhcCChHhhH
Confidence 2456888899999987 6899999995554 34556666664211 11111 1223468877776
Q ss_pred hhhHHHHH
Q psy1120 370 GVCSVTKV 377 (883)
Q Consensus 370 G~~~li~~ 377 (883)
=...|-.+
T Consensus 456 I~~~L~~~ 463 (521)
T PLN02854 456 LWYELAYT 463 (521)
T ss_pred HHHHHHHH
Confidence 44444333
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.4e-07 Score=98.26 Aligned_cols=175 Identities=17% Similarity=0.176 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTV 190 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv 190 (883)
...|+.+|+.+||+|||+++++++- +|+|...+. .+.++.++..+|+ |.+-|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID~----i~vGdL~nQ----------------------~ipssfvar~LGI--P~~gV 105 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQF----FLAGDLMNQ----------------------ITPTSFAARTLGI--PYLGL 105 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEEecCCC----------------------cCcHHHHHHHhCC--Cccce
Confidence 4579999999999999999998873 677754310 2334567777874 78999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
.+||||+..||.+|+..|++|.+|.|||+-.....+...-+ ++=-..|.-||.... ..--|+|++||.+..
T Consensus 106 ~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqf-----R~P~eyG~Qrp~taq----wTvTgaga~~l~~~~ 176 (334)
T PRK12404 106 FGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQF-----RYPTEYGGQKPPTAQ----WTVTGAGAAILSKTG 176 (334)
T ss_pred eecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhc-----cCcccccCcCCCccc----EEEEceEEEEEecCC
Confidence 99999999999999999999999999999877644432211 111122344443322 234467788887654
Q ss_pred cccce----eEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 271 DAKRV----YARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 271 ~A~~i----~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
+..+| .++|..+++. |.. .+-+--..+....|.+=|++.|.+|+|-|.|-.-
T Consensus 177 ~~~~i~~~T~Gkv~D~g~~-d~~---nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TG 232 (334)
T PRK12404 177 DGPRVTSATIGRVVDMGLT-DPF---NMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTG 232 (334)
T ss_pred CCceEEEEEEEEEEecCCC-Ccc---cchhhhhHHHHHHHHHHHHHhCCChhhccEEEEc
Confidence 43332 3444444432 221 1222224466788999999999999999999853
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.7e-07 Score=104.94 Aligned_cols=177 Identities=12% Similarity=0.093 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHH---HhhCCCC-c
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVS---YWLGVNG-P 186 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is---~~~~l~G-p 186 (883)
..-|+.+|+..||+++|+++++|+- |++|+.++++.. ...|..|. ..+|.+. +
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~Idl----livaTeT~~d~~-------------------ps~A~~v~~ll~~LG~~~~~ 109 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIGR----LEVGSETVIDKS-------------------KSIKTFLMQLFEESGNTDIE 109 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEEcCCCCCCC-------------------CchHHHHHHHHHHhCCCCcE
Confidence 4579999999999999999988873 888887664311 12334443 4455543 6
Q ss_pred eeeecccchhHHHHHHHHHHHHhcCCC--CcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEE
Q psy1120 187 SYTVDSACSSSLYALEHAYKSIRDGHC--NAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIM 264 (883)
Q Consensus 187 s~tv~tacsSsl~Al~~A~~~l~~G~~--d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~v 264 (883)
++-+..||++++.||..|...|++|.. +.|||.|+|...-. +.+. -..-|+||+|+
T Consensus 110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~-----------~~~~-----------e~t~GdGA~A~ 167 (459)
T PLN02577 110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYA-----------EGPA-----------RPTGGAGAVAM 167 (459)
T ss_pred EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhcc-----------CCCC-----------CCCCCcceEEE
Confidence 788999999999999999999999985 99999999972210 0010 11229999999
Q ss_pred EEcccccccceeEEEEeeeec--cCCCCCCC-CCCCC----------HHHHHHHHHHHHHHc------CCCCCCccEEEE
Q psy1120 265 YLQKSKDAKRVYARVVHAKTN--CDGYKEQG-ITYPS----------GALQQRLLEDFYSEC------EVDPKNLAWIEA 325 (883)
Q Consensus 265 vL~~~~~A~~i~a~I~g~~~~--~dg~~~~~-~~~p~----------~~~~~~~i~~al~~a------gl~~~dI~~ve~ 325 (883)
+++..+. ..+-....|.... -|-..... ...|- ......++++.+++. |++++|+||+..
T Consensus 168 lv~~~~~-~~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~d~~vf 246 (459)
T PLN02577 168 LVGPNAP-IVFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISDADYFVF 246 (459)
T ss_pred EEccCCC-ceeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHcCEEEe
Confidence 9986321 1111111222221 01001000 00011 122334455555555 888999999999
Q ss_pred ecCCCCCC
Q psy1120 326 HGTGTKVG 333 (883)
Q Consensus 326 hgtgt~~g 333 (883)
|-..|.++
T Consensus 247 HqP~~km~ 254 (459)
T PLN02577 247 HAPYNKLV 254 (459)
T ss_pred cCCccchh
Confidence 98777644
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.9e-06 Score=97.39 Aligned_cols=189 Identities=13% Similarity=0.155 Sum_probs=117.5
Q ss_pred CCcEEEEecceeccCC---CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhh--hh
Q psy1120 32 GDEICITGIAGVFPDS---TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQ--AH 106 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g---~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~--~~ 106 (883)
.++|..+-++|--|.. .+.+.|-+....- ..+.+..-.|-. ..-.+.| +.+-..+.+..+.+++.. ..
T Consensus 95 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~-----ri~~~sg-ig~~t~~p~~~~~~~~~~~~~~ 167 (502)
T PLN02377 95 PRPVYLVDYSCYRAPDHLKAPFARFMEHSRLT-GDFDDSSLEFQR-----KILERSG-LGEDTYVPEAMHYIPPRPSMAA 167 (502)
T ss_pred CCCEEEEeeeeecCCccccccHHHHHHHHHHh-CCCCHHHHHHHH-----HHHHhcC-CCCccccCchhccCCccchHHH
Confidence 3579999999999975 3667777665422 111110000000 0000111 111112222222233322 22
Q ss_pred cCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-
Q psy1120 107 TMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG- 185 (883)
Q Consensus 107 ~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G- 185 (883)
...-...++..|+.+||+++|+++++|+- +++ ++++++. .-.++.+|...||++.
T Consensus 168 ~~~ea~~l~~~A~~~aL~kaGi~p~dID~----LVv-~cS~~~~-------------------~PSlaa~V~~~LGlr~~ 223 (502)
T PLN02377 168 AREEAEQVMFGALDNLFANTNVNPKDIGI----LVV-NCSLFNP-------------------TPSLSAMIVNKYKLRGN 223 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCE----EEE-ECCCCCC-------------------CCcHHHHHHHHhCCCCC
Confidence 23345689999999999999999988862 344 3333210 1235778999999974
Q ss_pred -ceeeec-ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCC----Cccccc
Q psy1120 186 -PSYTVD-SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAAN----GYCRSE 259 (883)
Q Consensus 186 -ps~tv~-tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~----G~~~gE 259 (883)
.++.+. .|||+++.||+.|.+.|++|....|||.++|.+..... ++.+.. ...+||
T Consensus 224 v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~------------------~~d~~s~lv~n~LFgD 285 (502)
T PLN02377 224 IRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWY------------------FGNKKSMLIPNCLFRV 285 (502)
T ss_pred CeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccC------------------CCCCccccccceeecc
Confidence 788899 59999999999999999999999999999998442110 111222 356799
Q ss_pred ceEEEEEccc
Q psy1120 260 AVCIMYLQKS 269 (883)
Q Consensus 260 Ga~~vvL~~~ 269 (883)
||||+||++.
T Consensus 286 GAaAvlLs~~ 295 (502)
T PLN02377 286 GGSAVLLSNK 295 (502)
T ss_pred ccEEEEEecc
Confidence 9999999873
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.2e-06 Score=91.74 Aligned_cols=219 Identities=18% Similarity=0.242 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceee-
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYT- 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~t- 189 (883)
..-|+++|+..+|.++++++.+|. -|++|+.++.+..- ..+..|+..||+.--..+
T Consensus 51 ~vTmaveAA~~~l~r~~~D~~~Ig----~v~vgTES~~d~~K-------------------~~at~v~~~lg~~~~~~~~ 107 (377)
T COG3425 51 AVTMAVEAARNALKRADIDPSKIG----AVIVGSESGPDAVK-------------------PTATIVAEALGLNPSARAA 107 (377)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCc----eEEEecCCCccccc-------------------chHHHHHHHhCCCCceehh
Confidence 346899999999999999887765 38899876543321 246778899998633333
Q ss_pred -ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 190 -VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 190 -v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
+..||-++..||+.|...|.+|..+.+||.|.|....- +. +.--+.-|.|++|+|+..
T Consensus 108 d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~-------------~~--------~~~E~t~GAGavA~lIg~ 166 (377)
T COG3425 108 DVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYA-------------PG--------DALEYTAGAGAVAFLIGK 166 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccC-------------CC--------cccCccCCCceEEEEEcc
Confidence 77899999999999999999999999999999862110 10 012234589999999986
Q ss_pred cccccceeEEEEeeeecc----CCCCCCCCCCCC----------HHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCc
Q psy1120 269 SKDAKRVYARVVHAKTNC----DGYKEQGITYPS----------GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGD 334 (883)
Q Consensus 269 ~~~A~~i~a~I~g~~~~~----dg~~~~~~~~p~----------~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD 334 (883)
. ..+.+++.+.+.-. |-.+..+.+.|. ......+.+..+++.|++|+|.||+..|-+.+..
T Consensus 167 n---~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~-- 241 (377)
T COG3425 167 N---PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKF-- 241 (377)
T ss_pred C---CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCch--
Confidence 4 23445554433221 111111112222 2345677888889999999999999999887763
Q ss_pred HHHHHHHHHhhCCCCCCCeeeccc-CCCCCCCcccchhhHHHHHHHHhh
Q psy1120 335 PEEVQALENVFCPGRTTPLLIGSV-KSNIGHSEPASGVCSVTKVILAME 382 (883)
Q Consensus 335 ~~E~~Ai~~~f~~~~~~~~~igs~-K~~~GH~~~AsG~~~li~~~l~l~ 382 (883)
=..+...+... .+.+.-+-+ ..++|.+..+|...+|+.++-.-+
T Consensus 242 --~~ka~k~l~~~--~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~ 286 (377)
T COG3425 242 --PKKAAKSLGFK--EEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK 286 (377)
T ss_pred --HHHHHHHhCcc--HhhcCccchhhhhcCcccchhHHHHHHHHHhhcC
Confidence 33444444321 122222222 337999999999999998876654
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.5e-06 Score=99.05 Aligned_cols=195 Identities=11% Similarity=0.112 Sum_probs=121.9
Q ss_pred CCcEEEEecceeccCC---CCHHHHHHHHhcCC-C-cccCCC---cccccCCCCCCCCCCccccccCCCCCcccCCCChh
Q psy1120 32 GDEICITGIAGVFPDS---TDVRDFGEKLNNKV-D-LISDDD---RRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFK 103 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g---~~~~~~w~~l~~g~-~-~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~ 103 (883)
.++|..+-++|--|.. .+.+.|-+....-+ . .+.+.. -+|-. ..-.+.|. .+-..+....+.+++.
T Consensus 65 ~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-----~i~~rsGi-g~~t~~p~~~~~~~~~ 138 (478)
T PLN02932 65 PKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCE-----KILERSGL-GQETYIPEGLQCLPLQ 138 (478)
T ss_pred CCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHH-----HHHHHcCC-CCceeeccccccCCHH
Confidence 3579999999999975 36777777653221 1 222211 00000 00011111 1111122222223332
Q ss_pred --hhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhh
Q psy1120 104 --QAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWL 181 (883)
Q Consensus 104 --~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 181 (883)
.....+-...++.+|+.+||+++|+++++|+ -+++.++.++ ....++.+|...+
T Consensus 139 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId----~lIv~tst~~--------------------~~Pslaa~V~~~l 194 (478)
T PLN02932 139 QNLAVSRKETEEVIIGAVDNLFRNTGISPSDIG----ILVVNSSTFN--------------------PTPSLSSILVNKF 194 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCC--------------------CCCcHHHHHHHHh
Confidence 2333344668999999999999999998876 2555554331 1123577899999
Q ss_pred CCC--Cceeeec-ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccc
Q psy1120 182 GVN--GPSYTVD-SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRS 258 (883)
Q Consensus 182 ~l~--Gps~tv~-tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~g 258 (883)
|++ -.++-+. .|||+++.||..|.+.|++|....|||.++|.++.-.. + +..+ +..-....+|
T Consensus 195 Glr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~-----------~-~d~r--~~l~t~~LFg 260 (478)
T PLN02932 195 KLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLY-----------L-GNNK--SMLVTNCLFR 260 (478)
T ss_pred CCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccC-----------C-Ccch--hhhccceeec
Confidence 996 3788898 89999999999999999999999999999998443211 0 0000 0011346779
Q ss_pred cceEEEEEcccc
Q psy1120 259 EAVCIMYLQKSK 270 (883)
Q Consensus 259 EGa~~vvL~~~~ 270 (883)
|||||+||+..+
T Consensus 261 DGAAAvlLs~~~ 272 (478)
T PLN02932 261 IGGAAILLSNRS 272 (478)
T ss_pred ccceEEEEeccc
Confidence 999999999754
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.4e-06 Score=94.28 Aligned_cols=177 Identities=13% Similarity=0.125 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhC---CCC-c
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLG---VNG-P 186 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~---l~G-p 186 (883)
..-|+++|+..+|+++|+++++|+- |++|+.++++.. ...+..|...|+ .+. .
T Consensus 50 ~~tma~~AA~~lL~~a~id~~~Id~----Liv~TeS~~d~s-------------------ps~a~~v~~lL~~lG~~~~~ 106 (454)
T TIGR01833 50 INSLCLTVVSKLMERYNIDYNQIGR----LEVGTETIIDKS-------------------KSVKTVLMQLFEESGNTDVE 106 (454)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEECCCCCCCC-------------------CchHHHHHHHHHhcCCCCce
Confidence 4568999999999999999888863 778877665421 123455666544 332 5
Q ss_pred eeeecccchhHHHHHHHHHHHHhcCCC--CcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEE
Q psy1120 187 SYTVDSACSSSLYALEHAYKSIRDGHC--NAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIM 264 (883)
Q Consensus 187 s~tv~tacsSsl~Al~~A~~~l~~G~~--d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~v 264 (883)
++-+..||+++..||..|...|++|.. +.|||.|.|..... ++... ...|+||+|+
T Consensus 107 ~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~--------------~~~~~--------~t~GaGAvAm 164 (454)
T TIGR01833 107 GIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYA--------------KGNAR--------PTGGAGAVAM 164 (454)
T ss_pred EEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecccccc--------------CCCee--------eccccceEEE
Confidence 778999999999999999999999974 99999999872111 11111 1349999999
Q ss_pred EEcccccccceeEEEEeeeecc--CCCCCCCCC-CC------CHHHHHHHHHHHH-----------HHc----CCCCCCc
Q psy1120 265 YLQKSKDAKRVYARVVHAKTNC--DGYKEQGIT-YP------SGALQQRLLEDFY-----------SEC----EVDPKNL 320 (883)
Q Consensus 265 vL~~~~~A~~i~a~I~g~~~~~--dg~~~~~~~-~p------~~~~~~~~i~~al-----------~~a----gl~~~dI 320 (883)
+|.+.... .+-..+.++.+.. |-++...-. .| +...-.+++.++| +.+ +..++|+
T Consensus 165 Lv~~~~~~-~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~~df 243 (454)
T TIGR01833 165 LIGPNAPI-VFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTLNDF 243 (454)
T ss_pred EeccCccc-eecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCHhHc
Confidence 99865431 1111123332222 221211101 11 2223344443333 223 5788999
Q ss_pred cEEEEecCCCCCC
Q psy1120 321 AWIEAHGTGTKVG 333 (883)
Q Consensus 321 ~~ve~hgtgt~~g 333 (883)
||+-.|-..|.++
T Consensus 244 d~~~fH~P~~km~ 256 (454)
T TIGR01833 244 DYMVFHSPYCKLV 256 (454)
T ss_pred CEEeccCCcccHH
Confidence 9999998877744
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.5e-06 Score=96.51 Aligned_cols=188 Identities=14% Similarity=0.167 Sum_probs=116.7
Q ss_pred CcEEEEecceeccCC---CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhh--hhc
Q psy1120 33 DEICITGIAGVFPDS---TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQ--AHT 107 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g---~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~--~~~ 107 (883)
++|..+-++|--|.. .+.+.|-+....- ..+++..-+|-. ..-.+.| +.+-..+-+..+.++++. ...
T Consensus 100 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~-----~~~~~sg-lg~~t~~p~~~~~~~~~~~~~~~ 172 (511)
T PLN02192 100 RPVYLVDFSCYKPDDSRKCTRKIFMDRSKLT-GSFTEENLEFQR-----KILERSG-LGESTYLPEAVLNVPPNPCMAEA 172 (511)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHc-CCCCHHHHHHHH-----HHHHhcC-CCCcccCChhhccCCCCccHHHH
Confidence 579999999999975 3567776665422 111110000000 0001111 112223333333344332 111
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-- 185 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-- 185 (883)
..-...++..|+.+||+++|+++++|+- +++.++ .++ ..-.++.+|...+|++.
T Consensus 173 ~~Ea~~~~~~Aa~~aL~kaGi~p~DIDi----LIv~~S-~~~-------------------~~PSlaa~I~n~lGlr~~i 228 (511)
T PLN02192 173 RKEAETVMFGAIDQLLAKTSVKPKDIGI----LIVNCS-LFN-------------------PTPSLSAMVINHYKLRGNI 228 (511)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCE----EEEECC-CCC-------------------CCchHHHHHHHHhCCCCCc
Confidence 2235578899999999999999988762 344432 221 11235778999999974
Q ss_pred ceeeec-ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCC----cccccc
Q psy1120 186 PSYTVD-SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANG----YCRSEA 260 (883)
Q Consensus 186 ps~tv~-tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G----~~~gEG 260 (883)
.++.++ .|||+++.||+.|.+.|+.+....|||.++|.+. ...+ +..+++- ..+|||
T Consensus 229 ~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S-~n~y-----------------~g~drs~lv~n~LFgDG 290 (511)
T PLN02192 229 LSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT-LNWY-----------------FGNDRSMLVSNCLFRMG 290 (511)
T ss_pred eEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc-ccCC-----------------CCCCHHHHhcccccccc
Confidence 789999 6999999999999999999999999999999844 1100 0011111 357999
Q ss_pred eEEEEEccc
Q psy1120 261 VCIMYLQKS 269 (883)
Q Consensus 261 a~~vvL~~~ 269 (883)
|||+||++.
T Consensus 291 AaAvLLs~~ 299 (511)
T PLN02192 291 GAAILLSNK 299 (511)
T ss_pred ceEEEEecc
Confidence 999999874
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.1e-05 Score=80.63 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=100.9
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-----hhhhhccCCccccccchhhHH
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-----FYEKLQINGFGITGCSRAMLA 174 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~a 174 (883)
|++.+.|+|++..|++++++++++++. .+++ .+++++..|+..... ..+...+.|..|..+..|.++
T Consensus 23 lp~m~rRRls~~~rla~~~a~~~~~~~----~~~d----~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~a 94 (218)
T PF13723_consen 23 LPPMQRRRLSRLSRLALEAALECLAED----EQPD----AIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAA 94 (218)
T ss_pred CCHHHHcccCHHHHHHHHHHHHHHhcc----CCCC----cEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHH
Confidence 899999999999999999999999653 1222 578888888765422 123345788899999999999
Q ss_pred HHHHHhhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccCh
Q psy1120 175 NRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHP 227 (883)
Q Consensus 175 ~~is~~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~ 227 (883)
+.+|+..+-++|+.+|..+-.|...||..|+..|..| ++-||++.+|..+..
T Consensus 95 G~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~ 146 (218)
T PF13723_consen 95 GYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPE 146 (218)
T ss_pred HHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCCh
Confidence 9999999999999999999999999999999999999 999999999985543
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.3e-06 Score=77.61 Aligned_cols=99 Identities=15% Similarity=0.131 Sum_probs=60.7
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCe
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPL 353 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~ 353 (883)
+++++|++++........ + ..+...+++++|+++|++++|||++|.|-..+. .++..++. ++- ...++
T Consensus 2 ~pla~i~~~~~~~~~P~~--~----~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~----~~l~~~~~-lg~-~~~~v 69 (123)
T PF02803_consen 2 KPLARIVGYASAGVDPED--M----GLGPVPAARKALERAGLTPDDIDVIEINEAFAA----QVLAFLEA-LGL-DPEKV 69 (123)
T ss_dssp -ESEEEEEEEEEE--GGG--G----GGTHHHHHHHHHHHHT--GGGESEEEE--SBHH----HHHHHHHH-HTT-GGGGB
T ss_pred CeEEEEEEEEEEecCHHH--h----CchHHHHHHHHHHHhCCCccccchhhccchhhh----HHHHhhcc-ccc-ccccc
Confidence 467899998765533211 1 123478999999999999999999999955442 23333332 321 12233
Q ss_pred eecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 354 LIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 354 ~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
.+...--.+||+.||||+..++.++..|+++
T Consensus 70 N~~GG~la~GHP~gasG~r~~~~l~~~L~~~ 100 (123)
T PF02803_consen 70 NPNGGALALGHPLGASGARLVVELAHQLRRR 100 (123)
T ss_dssp STT--HHHH-BHTTTHHHHHHHHHHHHHHHH
T ss_pred CcccccccccccccccccchhhhhHHHHHHh
Confidence 3333333369999999999999999999764
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=97.73 E-value=3.2e-05 Score=66.63 Aligned_cols=66 Identities=20% Similarity=0.340 Sum_probs=48.7
Q ss_pred eeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEc
Q psy1120 188 YTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQ 267 (883)
Q Consensus 188 ~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~ 267 (883)
+-|..+|++.+.||++|...|++|.++.+|+.+.|....... +......++.||||+++||+
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~------------------~~~~~~~~~~gDgAaA~vl~ 62 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVD------------------RTDRQTAFIFGDGAAAVVLS 62 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSH------------------TTHHHHHTTB-EEEEEEEEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeecccccccc------------------ccccCcceeecchheEEEEE
Confidence 357889999999999999999999999999999998433111 00123345789999999999
Q ss_pred cccc
Q psy1120 268 KSKD 271 (883)
Q Consensus 268 ~~~~ 271 (883)
+.++
T Consensus 63 ~~~~ 66 (80)
T PF08545_consen 63 RDEE 66 (80)
T ss_dssp EESS
T ss_pred ecCC
Confidence 9743
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00025 Score=75.00 Aligned_cols=194 Identities=12% Similarity=0.128 Sum_probs=117.9
Q ss_pred CcEEEEecceeccCC---CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhh--hhc
Q psy1120 33 DEICITGIAGVFPDS---TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQ--AHT 107 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g---~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~--~~~ 107 (883)
++|.++-++|--|.. .+.+.|++....-.. +++..-.|-. ..-.+.|. .+-..+-+..+.+++.. ...
T Consensus 7 r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~-f~~~sl~F~~-----kIlerSGl-G~eTy~P~~~~~~p~~~s~~~a 79 (290)
T PF08392_consen 7 RPVYLVDFACYKPPDELRVSREEFIEHARRCGR-FDEESLDFQR-----KILERSGL-GDETYLPPALHEIPPDPSLAAA 79 (290)
T ss_pred CCEEEEeeeecCCCcccccCHHHHHHHHHhccc-CChhHHHHHH-----HHHHhcCC-CccccCCcccccCCCcccHHHH
Confidence 489999999999985 478889888764322 1211000000 00011111 11111112223333331 112
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCce
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPS 187 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps 187 (883)
.+-...++..++.++|+.+|+.|++++- +++.++.. +....++.+|...||++.-.
T Consensus 80 ~~Eae~v~f~av~~LL~ktgv~p~dIdi----LVvncs~f--------------------~ptPSLsamIvnr~~mr~di 135 (290)
T PF08392_consen 80 REEAEMVIFGAVDDLLAKTGVKPSDIDI----LVVNCSLF--------------------NPTPSLSAMIVNRYGMRSDI 135 (290)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCE----EEEECcCC--------------------CcCCcHHHHHHHHhCCCcCe
Confidence 2345568888999999999999988762 44444321 11123567888889998754
Q ss_pred ee---ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEE
Q psy1120 188 YT---VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIM 264 (883)
Q Consensus 188 ~t---v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~v 264 (883)
.+ ..-|||+|+.+|++|.+.|+...-..|||..+|.+... .+.+-++..+++ ...+.+|++|+
T Consensus 136 ~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s~~-~Y~G~~rsmlv~-------------NcLFr~GgAAv 201 (290)
T PF08392_consen 136 KSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENISAN-WYRGNDRSMLVS-------------NCLFRMGGAAV 201 (290)
T ss_pred eeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeecccc-cccCCcHHHhhc-------------cccccCCceeE
Confidence 44 34579999999999999999999999999999985433 222222222222 24578999999
Q ss_pred EEccccc
Q psy1120 265 YLQKSKD 271 (883)
Q Consensus 265 vL~~~~~ 271 (883)
+|.+...
T Consensus 202 LLSn~~~ 208 (290)
T PF08392_consen 202 LLSNKPS 208 (290)
T ss_pred EeecCcc
Confidence 9987644
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00017 Score=81.54 Aligned_cols=190 Identities=10% Similarity=0.125 Sum_probs=109.3
Q ss_pred CcEEEEecceeccCC---CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhh-hhcC
Q psy1120 33 DEICITGIAGVFPDS---TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQ-AHTM 108 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g---~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~-~~~~ 108 (883)
.+|..+-++|--|.. .+.+.|-+....- ..+++..-+|-.. .-.+.| +.+-..+....+..++.. .+.-
T Consensus 58 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-~~~~~~s~~F~~~-----i~~rSG-lg~et~~p~~~~~~~~~~~~~~~ 130 (466)
T PLN00415 58 KPVYLVDFSCHQPTDSCKISSETFFNMAKGA-QLYTEETIQFMTR-----ILNRSG-LGDDTYSPRCMLTSPPTPSMYEA 130 (466)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHc-CCCCHHHHHHHHH-----HHHHcC-CCCCeeeCCccccCCCCCChhhh
Confidence 579999999999975 3667777765432 1121110011000 001111 111111111111122211 0011
Q ss_pred ChHHHHHHH-HHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--C
Q psy1120 109 DPMCRIILE-KTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--G 185 (883)
Q Consensus 109 dp~~rl~l~-aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--G 185 (883)
+....+.+. |+.+||+++|+++++|+- +++. +++.+. ...++.++...+|++ -
T Consensus 131 ~~e~em~i~~A~~~aL~~aGi~p~dID~----LIvs-~T~~~~-------------------~Pslaa~l~~~LGLr~~v 186 (466)
T PLN00415 131 RHESELVIFGALNSLFKKTGIEPREVGI----FIVN-CSLFNP-------------------NPSLSSMIVNRYKLKTDV 186 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCE----EEEE-CcCCCC-------------------CchHHHHHHHHhCCCCCc
Confidence 223344444 777888999999988762 3332 222110 123567788899996 2
Q ss_pred ceeeecc-cchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCC---Ccccccce
Q psy1120 186 PSYTVDS-ACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAAN---GYCRSEAV 261 (883)
Q Consensus 186 ps~tv~t-acsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~---G~~~gEGa 261 (883)
..+-|.. ||++++.||..|.+.++++....|||.++|.+..... ..+ | ... ...+||||
T Consensus 187 ~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~----------~~~------d-r~~lv~n~LFgDGA 249 (466)
T PLN00415 187 KTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMY----------RGN------D-RSMLVPNCLFRVGG 249 (466)
T ss_pred eEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEeccccccc----------CCC------c-HhHhccceeecccc
Confidence 5677987 9999999999999999999999999999998432110 000 1 111 24679999
Q ss_pred EEEEEcccc
Q psy1120 262 CIMYLQKSK 270 (883)
Q Consensus 262 ~~vvL~~~~ 270 (883)
+|+||++..
T Consensus 250 AAvlLs~~~ 258 (466)
T PLN00415 250 AAVMLSNRS 258 (466)
T ss_pred eEEEEecCc
Confidence 999998743
|
|
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0008 Score=70.61 Aligned_cols=172 Identities=15% Similarity=0.204 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTV 190 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv 190 (883)
..+|+.+++..||+.||+.+++++ ++++. |.. + ..+.++..+..|++ |-+-+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId-----~~~aG---DLl----------n--------Q~i~s~f~ar~l~i--Pf~Gl 102 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDID-----YLFAG---DLL----------N--------QIISSSFAARDLGI--PFLGL 102 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-S-----EEEEE---ETT----------C--------CCCHHHHHHHHHT----EEEB
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCe-----EEEeh---hhh----------h--------hhHHHHHHHHhcCC--Cccch
Confidence 468999999999999999988876 55552 110 0 02334555666665 88889
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
..|||++..+|.+|...|..|-+|.+|++-.....+...-+-| =-..|.-||-. .-..--|+|++||.+..
T Consensus 103 ygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~-----P~EyG~Qrp~t----AqwTVTGaGa~il~~~~ 173 (329)
T PF07451_consen 103 YGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRF-----PTEYGGQRPPT----AQWTVTGAGAAILSKEG 173 (329)
T ss_dssp --CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT--------GGGT----TT------EE--EEEEEEEESS-
T ss_pred hhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccC-----chhccCCCCCc----ccEEEeceEEEEEecCC
Confidence 9999999999999999999999999999987664443321111 01112233321 12334578888888765
Q ss_pred cccceeEEEEeeeeccCCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEE
Q psy1120 271 DAKRVYARVVHAKTNCDGYKEQGITYPS------GALQQRLLEDFYSECEVDPKNLAWIEA 325 (883)
Q Consensus 271 ~A~~i~a~I~g~~~~~dg~~~~~~~~p~------~~~~~~~i~~al~~agl~~~dI~~ve~ 325 (883)
...+|...-.|-.+ ..+++.|+ ..+....|.+=|++.|.+|+|-|.|-.
T Consensus 174 ~~p~It~~T~GkVv------D~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvT 228 (329)
T PF07451_consen 174 SGPRITHATIGKVV------DMGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVT 228 (329)
T ss_dssp -SEEEEEEE----B-------SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEE
T ss_pred CCcEEEEEEEEEEE------EcCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEe
Confidence 54333222111111 23455554 334567788889999999999999985
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0004 Score=72.51 Aligned_cols=187 Identities=16% Similarity=0.182 Sum_probs=123.4
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCc--e
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGP--S 187 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gp--s 187 (883)
...-+..++.++||+++++.+++++- |++.++++ .....+=.||...+||+-- -
T Consensus 75 ~a~~l~v~a~r~aL~~~~l~pedId~----vv~vtsTG--------------------~~~Ps~dari~~~Lgl~p~~~R 130 (356)
T COG3424 75 EAVPLGVDALRRALDGSPLRPEDIDA----VVTVTSTG--------------------LATPSLDARIVGELGLSPDTRR 130 (356)
T ss_pred HHHHHHHHHHHHHhccCCCCHHHCcE----EEEEeecc--------------------ccCCChhHHHHhhcCCCCccce
Confidence 34568899999999999999988863 44433322 1111233577888888521 1
Q ss_pred e-eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCC----cccccceE
Q psy1120 188 Y-TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANG----YCRSEAVC 262 (883)
Q Consensus 188 ~-tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G----~~~gEGa~ 262 (883)
+ .-.-||+.+..++..|...++..-...|++..+|+++-... ..|..... -++|||++
T Consensus 131 vpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~~-----------------~~d~t~s~lVgtaLF~DG~A 193 (356)
T COG3424 131 VPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTYV-----------------FADDTKSNLVGTALFGDGAA 193 (356)
T ss_pred eeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeeee-----------------cCCCCcccceeeeeecCCee
Confidence 2 23568999999999999999999999999999998542211 01111112 34799999
Q ss_pred EEEEccccccc--c-----ee----------EEEEeeeeccCCCCC-CCCCCCC--HHHHHHHHHHHHHHcCCCCCCccE
Q psy1120 263 IMYLQKSKDAK--R-----VY----------ARVVHAKTNCDGYKE-QGITYPS--GALQQRLLEDFYSECEVDPKNLAW 322 (883)
Q Consensus 263 ~vvL~~~~~A~--~-----i~----------a~I~g~~~~~dg~~~-~~~~~p~--~~~~~~~i~~al~~agl~~~dI~~ 322 (883)
++|+.-...+. + |+ =.+.|+.++.+|.+- -+...|+ .......+...|..-|++.+||+.
T Consensus 194 A~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~ 273 (356)
T COG3424 194 AVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEA 273 (356)
T ss_pred EEEEeccccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhce
Confidence 99987533322 1 11 135567777777531 0111132 345667888999999999999999
Q ss_pred EEEecCCCCCCcHHH
Q psy1120 323 IEAHGTGTKVGDPEE 337 (883)
Q Consensus 323 ve~hgtgt~~gD~~E 337 (883)
+-.|=-|-++-|..|
T Consensus 274 w~~HPGG~KVida~~ 288 (356)
T COG3424 274 WVVHPGGPKVIDAYE 288 (356)
T ss_pred eeeCCCCchHHHHHH
Confidence 999966666555443
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0019 Score=66.54 Aligned_cols=122 Identities=15% Similarity=0.214 Sum_probs=79.4
Q ss_pred cCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-
Q psy1120 107 TMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG- 185 (883)
Q Consensus 107 ~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G- 185 (883)
...-...|+.+++.+||+++|+++++|. -+++-++++ ...-.+-.++...+||+.
T Consensus 96 ~~~~a~~L~~~Aa~~AL~~~g~~~~dIt----hlv~vs~TG--------------------~~~PglD~~l~~~LgL~~~ 151 (226)
T PF00195_consen 96 YAEEAPPLAEEAARKALAEAGLDPSDIT----HLVTVSCTG--------------------IAAPGLDARLINRLGLRPD 151 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS-GGGEC----EEEEEESSS--------------------SECS-HHHHHHHHHT--TT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcccc----eEEEEecCC--------------------cCCCchhHHHHhcCCCCCC
Confidence 3444568999999999999999888765 355444322 111223457888899864
Q ss_pred --ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCC----Cccccc
Q psy1120 186 --PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAAN----GYCRSE 259 (883)
Q Consensus 186 --ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~----G~~~gE 259 (883)
-.....-||..|+.+|..|....++..-..|||..+|+.+--. . . +.|.+.+ ...+||
T Consensus 152 v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~--~---~-----------~~~~~~~~lv~~aLFgD 215 (226)
T PF00195_consen 152 VQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCSLHF--Q---A-----------PNDDSLDNLVANALFGD 215 (226)
T ss_dssp SEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGGGTH--H---H-----------CCTTSHHHHHHHHHB-E
T ss_pred cEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeEEEE--e---c-----------CCcccHHHHhHHhhhcC
Confidence 2344678999999999999999999999999999999854211 1 0 1111111 234799
Q ss_pred ceEEEEEcc
Q psy1120 260 AVCIMYLQK 268 (883)
Q Consensus 260 Ga~~vvL~~ 268 (883)
||+++||..
T Consensus 216 GaAA~vv~~ 224 (226)
T PF00195_consen 216 GAAAVVVGA 224 (226)
T ss_dssp EEEEEEEES
T ss_pred CceEEEEcc
Confidence 999999864
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >smart00826 PKS_DH PKS_DH | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0023 Score=62.66 Aligned_cols=40 Identities=13% Similarity=0.293 Sum_probs=36.3
Q ss_pred EEEEEEecCCCCCccCCCccCCeeEechHHHHHHHHhccc
Q psy1120 842 RTVVVSLKDDEMEFVSGHMIDGRNLFPATGYLATVCNVSE 881 (883)
Q Consensus 842 ~~~~~~l~~~~~p~l~dH~v~g~~v~P~a~y~ema~ea~~ 881 (883)
..|+..++....|||.||+++|..++|+++|++|++++++
T Consensus 16 ~~~~~~~~~~~~~~l~~h~v~~~~~~P~~~~~~~~~~a~~ 55 (167)
T smart00826 16 VVFTGRLSLRTHPWLADHRVGGTVVLPGAAYVEMALAAAD 55 (167)
T ss_pred eEEEEEeCCCCCchhhcCEECCEEEecHHHHHHHHHHHHH
Confidence 5688888888899999999999999999999999998864
|
|
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.052 Score=53.33 Aligned_cols=89 Identities=16% Similarity=0.262 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCc----e
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGP----S 187 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gp----s 187 (883)
.-|++.++...|++.+++++++.. +++|+.++-... -.++..+-..|++.|. +
T Consensus 54 vTmA~nAa~~ll~~~~id~~~Ig~----l~vgTES~vD~s-------------------Ks~~t~v~~ll~~s~~~~~~~ 110 (174)
T PF01154_consen 54 VTMAANAAKPLLDRYNIDPDDIGR----LIVGTESGVDKS-------------------KSISTYVHQLLGLSGNPDCRG 110 (174)
T ss_dssp HHHHHHHHHTTHHHHT-HHHHEEE----EEEE-SS-SBSS-------------------S-HHHHHHHHTTTTT-SSSEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHccE----EEEecccccccc-------------------ccHHHHHHHHhCcCCCCceee
Confidence 468999999999998877665532 677775431100 1256678888998553 3
Q ss_pred eeecccchhHHHHHHHHHHHHhcCCCC--cEEEecccc
Q psy1120 188 YTVDSACSSSLYALEHAYKSIRDGHCN--AAFVGGCNL 223 (883)
Q Consensus 188 ~tv~tacsSsl~Al~~A~~~l~~G~~d--~alvgG~~~ 223 (883)
+-+-.||=++..||..|+..|+++..| .+||.+.|.
T Consensus 111 ~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 111 VEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp EEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred eehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 557899999999999999999998765 899999987
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >cd07198 Patatin Patatin-like phospholipase | Back alignment and domain information |
|---|
Probab=87.66 E-value=1.5 Score=43.62 Aligned_cols=47 Identities=23% Similarity=0.292 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHH
Q psy1120 527 AAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAA 573 (883)
Q Consensus 527 ~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv 573 (883)
.+.+++..+.|.+.|+++|.+.|-|.|-+.|++.+.-.+.++...+.
T Consensus 10 G~~~~Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~~~~~~~~~ 56 (172)
T cd07198 10 GIYHVGVAKALRERGPLIDIIAGTSAGAIVAALLASGRDLEEALLLL 56 (172)
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 46789999999999999999999999999999888888888876665
|
Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family. |
| >cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1 | Back alignment and domain information |
|---|
Probab=82.43 E-value=3 Score=41.52 Aligned_cols=46 Identities=24% Similarity=0.284 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHH
Q psy1120 528 AIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAA 573 (883)
Q Consensus 528 a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv 573 (883)
+.+++..+.|++.|+.||.++|-|.|-+.|+..+--.+.++..+..
T Consensus 13 ~~~~Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~~~~~~~~~~ 58 (175)
T cd07205 13 LAHIGVLKALEEAGIPIDIVSGTSAGAIVGALYAAGYSPEEIEERA 58 (175)
T ss_pred HHHHHHHHHHHHcCCCeeEEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 4688889999999999999999999999998887667877766554
|
Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc |
| >cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli | Back alignment and domain information |
|---|
Probab=82.03 E-value=2.8 Score=43.33 Aligned_cols=39 Identities=33% Similarity=0.460 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCC
Q psy1120 527 AAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFT 565 (883)
Q Consensus 527 ~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~ls 565 (883)
.+.|++..+.|.+.|+.+|.+.|-|.|-+.|+..+.-.+
T Consensus 10 G~~~~Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 10 GAYQAGVLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 477899999999999999999999999998887776666
|
Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. |
| >cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2 | Back alignment and domain information |
|---|
Probab=81.79 E-value=3.4 Score=41.81 Aligned_cols=47 Identities=17% Similarity=0.200 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHH
Q psy1120 527 AAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAA 573 (883)
Q Consensus 527 ~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv 573 (883)
-+++++..+.|++.|+.||.++|-|.|-+.|+..+--.+.++..++.
T Consensus 11 G~~~~Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~~~~~~~~~~ 57 (194)
T cd07207 11 GIAYIGALKALEEAGILKKRVAGTSAGAITAALLALGYSAADIKDIL 57 (194)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 35668888999999999999999999998887776656776655444
|
ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona |
| >cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6 | Back alignment and domain information |
|---|
Probab=80.21 E-value=4 Score=43.74 Aligned_cols=43 Identities=21% Similarity=0.229 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhH
Q psy1120 528 AIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTI 570 (883)
Q Consensus 528 a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~ 570 (883)
+.+++..+.|++.||.+|++.|-|+|-+.++..+--.+.++..
T Consensus 23 ~ahiGVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~~~~~~~ 65 (269)
T cd07227 23 ISHIGILQALEEAGIPIDAIGGTSIGSFVGGLYAREADLVPIF 65 (269)
T ss_pred HHHHHHHHHHHHcCCCccEEEEECHHHHHHHHHHcCCchHHHH
Confidence 4678888999999999999999999987776554445655543
|
These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 883 | ||||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 1e-120 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 1e-102 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 1e-118 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 1e-100 | ||
| 2jfk_A | 433 | Structure Of The Mat Domain Of Human Fas With Malon | 8e-90 | ||
| 2jfd_A | 425 | Structure Of The Mat Domain Of Human Fas Length = 4 | 2e-87 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 6e-67 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 2e-18 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 2e-61 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 4e-15 | ||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 2e-26 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 1e-23 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 2e-22 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 3e-21 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 4e-18 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 7e-18 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 3e-17 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 4e-17 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 6e-17 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 6e-17 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 7e-17 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 7e-17 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 7e-17 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 1e-16 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 2e-16 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 4e-16 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 5e-16 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 8e-16 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 2e-15 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 2e-15 | ||
| 3tzw_A | 491 | Crystal Structure Of A Fragment Containing The Acyl | 3e-15 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 1e-14 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 1e-14 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 2e-14 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 3e-14 | ||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 9e-14 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 9e-14 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 9e-14 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 2e-13 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 4e-13 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 9e-13 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 1e-12 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 2e-12 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 3e-12 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 8e-11 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 7e-10 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 7e-10 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 7e-10 | ||
| 3g87_A | 394 | Crystal Structure Of Malonyl Coa-Acyl Carrier Prote | 8e-08 | ||
| 3im8_A | 307 | Crystal Structure Of Mcat From Streptococcus Pneumo | 6e-07 | ||
| 3zen_D | 3089 | Cryo-em Structure Of The Mycobacterial Fatty Acid S | 1e-06 | ||
| 3rgi_A | 286 | Trans-Acting Transferase From Disorazole Synthase L | 1e-05 | ||
| 3sbm_A | 281 | Trans-Acting Transferase From Disorazole Synthase I | 1e-05 | ||
| 3tqe_A | 316 | Structure Of The Malonyl Coa-Acyl Carrier Protein T | 1e-04 | ||
| 3ptw_A | 336 | Crystal Structure Of Malonyl Coa-Acyl Carrier Prote | 2e-04 | ||
| 3qat_A | 318 | Crystal Structure Of Acyl-Carrier-Protein-S-Malonyl | 3e-04 |
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|2JFK|A Chain A, Structure Of The Mat Domain Of Human Fas With Malonyl-Coa Length = 433 | Back alignment and structure |
|
| >pdb|2JFD|A Chain A, Structure Of The Mat Domain Of Human Fas Length = 425 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|3TZW|A Chain A, Crystal Structure Of A Fragment Containing The Acyltransferase Domain Of Pks13 From Mycobacterium Tuberculosis In The Orthorhombic Apoform At 2.6 A Length = 491 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|3G87|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Burkholderia Pseudomallei Using Dried Seaweed As Nucleant Or Protease Length = 394 | Back alignment and structure |
|
| >pdb|3IM8|A Chain A, Crystal Structure Of Mcat From Streptococcus Pneumoniae Length = 307 | Back alignment and structure |
|
| >pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 | Back alignment and structure |
|
| >pdb|3RGI|A Chain A, Trans-Acting Transferase From Disorazole Synthase Length = 286 | Back alignment and structure |
|
| >pdb|3SBM|A Chain A, Trans-Acting Transferase From Disorazole Synthase In Complex With Acetate Length = 281 | Back alignment and structure |
|
| >pdb|3TQE|A Chain A, Structure Of The Malonyl Coa-Acyl Carrier Protein Transacylase (Fabd) From Coxiella Burnetii Length = 316 | Back alignment and structure |
|
| >pdb|3PTW|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Clostridium Perfringens Atcc 13124 Length = 336 | Back alignment and structure |
|
| >pdb|3QAT|A Chain A, Crystal Structure Of Acyl-Carrier-Protein-S-Malonyltransferase From Bartonella Henselae Length = 318 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 572 bits (1476), Expect = 0.0
Identities = 191/384 (49%), Positives = 277/384 (72%), Gaps = 2/384 (0%)
Query: 30 APGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYE 89
+ G+E+ I G++G P+S ++++F + L VD+++DDDRRWK +P+R+GKL +
Sbjct: 1 STGEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKA--GLYGLPRRSGKLKD 58
Query: 90 VNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSES 149
+++FDA+FFGVH KQAHTMDP R++LE TYEA++D GINP SLRG+ TGV++G SE+
Sbjct: 59 LSRFDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSET 118
Query: 150 EKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIR 209
+ + + G+ + GC RAM+ANR+S++ GPS +D+ACSSSL AL++AY++I
Sbjct: 119 SEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIH 178
Query: 210 DGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269
G C AA VGG N+ L P S+QF RLG+LSP+G CK+FD A NGYCRSE V + L K
Sbjct: 179 SGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLTKK 238
Query: 270 KDAKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTG 329
A+RVYA +++A TN DG+KEQG+T+PSG +Q++L+ Y V P++ +IEAHGTG
Sbjct: 239 SLARRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTG 298
Query: 330 TKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPN 389
TKVGDP+E+ + C R PLLIGS KSN+GH EPASG+ ++ KV+L++E+G+ PN
Sbjct: 299 TKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPN 358
Query: 390 INFKSPRKDIPSFHNGKIQLESRP 413
++F SP +IP+ +G++Q+ +P
Sbjct: 359 LHFHSPNPEIPALLDGRLQVVDQP 382
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 465 bits (1199), Expect = e-150
Identities = 179/469 (38%), Positives = 274/469 (58%), Gaps = 19/469 (4%)
Query: 408 QLESRPLDAEYVRLFHEIHSDDIAGHMYRGYTILSANSDKKIRSSTHYPGDTRPLWFVFS 467
Q D ++ + ++I + +RGY +L ++ P RPLWF+ S
Sbjct: 442 QGLRHSQDLAFLSMLNDIAAVPATAMPFRGYAVLG--GERGGPEVQQVPAGERPLWFICS 499
Query: 468 GMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIA 527
GMG+QW GMG LM + F +I + +KP G+ V +++ T+ FD+I++SFV +
Sbjct: 500 GMGTQWRGMGLSLMRLDRFRDSILRSDEAVKPFGLKVSQLLLSTDESTFDDIVHSFVSLT 559
Query: 528 AIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIR 587
AIQIGL+D+L + + PD I+GHS+GE+ C YADGC + E+ +LAAY+RG E
Sbjct: 560 AIQIGLIDLLSCMGLRPDGIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQCIKEAHLPP 619
Query: 588 GAMAAVGLGYKDLRSRCPPEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINV 647
GAMAAVGL +++ + RCPP + ACHNS D+ TISGP+ V +FV +L+ + +FA+ +
Sbjct: 620 GAMAAVGLSWEECKQRCPPGVVPACHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKEVRT 679
Query: 648 ANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWT 707
H+ + I + + V +PKPRS +WLSTS EA W
Sbjct: 680 GGMAFHSY-------------FMEAIAPPLLQ-ELKKVIREPKPRSARWLSTSIPEAQWH 725
Query: 708 THLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVS 767
+ LA+ SSAEY+ NNL+SPVLF+E H+ ++A+ LEIAPH LLQA+L+R L + T +
Sbjct: 726 SSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKRGLKPSCTIIP 785
Query: 768 LTQRENANSVLYLLQALGKLYESGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWY 827
L ++++ +++ + L +G+L+ SG+ + L+P ++FP RGTP+ISPL++W+HS W
Sbjct: 786 LMKKDHRDNLEFFLAGIGRLHLSGIDANPNALFPPVEFPAPRGTPLISPLIKWDHSLAWD 845
Query: 828 VTTYRMQEKLKSGERTVVV---SLKDDEMEFVSGHMIDGRNLFPATGYL 873
V + + + ++ H +DGR LFPATGYL
Sbjct: 846 VPAAEDFPNGSGSPSAAIYNIDTSSESPDHYLVDHTLDGRVLFPATGYL 894
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 594 bits (1533), Expect = 0.0
Identities = 190/382 (49%), Positives = 274/382 (71%), Gaps = 2/382 (0%)
Query: 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNK 92
+E+ I G++G P+S ++ +F L VD+++ DDRRWK +P+R GKL ++++
Sbjct: 2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKA--GLYGLPRRMGKLKDLSR 59
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
FDA+FFGVH KQA+TMDP R++LE TYEA++D GINP SLRG+ TGV++G S++ +
Sbjct: 60 FDASFFGVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEA 119
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + G+ + GC RAM+ANR+S++ GPS T+D+ACSSSL AL+ AY++IR G
Sbjct: 120 LSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGE 179
Query: 213 CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272
C+AA VGG N+ L P SLQF +LG+LS DG C+SFD GYCR+EAV + L K A
Sbjct: 180 CSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLA 239
Query: 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332
+RVYA +++A TN DG KEQG+T+PSG +Q++L+ Y+ DP++L +IEAHGTGTKV
Sbjct: 240 RRVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKV 299
Query: 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
GDP+E+ + N C R PLLIGS KSN+GH EPASGV ++ KV+L++E+G+ PN+++
Sbjct: 300 GDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHY 359
Query: 393 KSPRKDIPSFHNGKIQLESRPL 414
+P +IP+ +G++Q+ RPL
Sbjct: 360 HTPNPEIPALQDGRLQVVDRPL 381
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 480 bits (1238), Expect = e-147
Identities = 178/469 (37%), Positives = 271/469 (57%), Gaps = 19/469 (4%)
Query: 408 QLESRPLDAEYVRLFHEIHSDDIAGHMYRGYTILSANSDKKIRSSTHYPGDTRPLWFVFS 467
Q D +V + +EI + +RGY + + + PG RP+WF+ S
Sbjct: 440 QGLRHSRDLAFVGMLNEIAAVSPVAMPFRGYAV--LGGEAGSQEVQQVPGSKRPVWFICS 497
Query: 468 GMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIA 527
GMG+QW GMG LM + F +I + LKP G+ V ++ T+ + D+I++SFV +
Sbjct: 498 GMGAQWQGMGLSLMRLDRFRDSILRSDQALKPLGLRVSDLLLSTDEAVLDDIVSSFVSLT 557
Query: 528 AIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIR 587
+IQI L+D+L +L + PD IIGHS+GE+ C YADGC T E+ +L++Y+RG E +
Sbjct: 558 SIQIALIDLLTSLGLQPDGIIGHSLGEVACGYADGCLTQEEAVLSSYWRGYCIKEANVLP 617
Query: 588 GAMAAVGLGYKDLRSRCPPEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINV 647
GAMAAVGL +++ + RCPP I ACHNS D+ TISGP+ + +F+ +L+ +++F + +
Sbjct: 618 GAMAAVGLSWEECKQRCPPGIVPACHNSKDTVTISGPQAAMSEFLQQLKREDVFVKEVRT 677
Query: 648 ANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWT 707
H+ + I + R V PKPRS +WLSTS EA W
Sbjct: 678 GGIAFHSY-------------FMESIAPTL-LRQLRKVILDPKPRSKRWLSTSIPEAQWQ 723
Query: 708 THLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVS 767
LA+ SAEY NNL+SPVLF+E +H+ +A+ +EIAPH LLQA+L+RSL + T +
Sbjct: 724 GSLARTFSAEYSVNNLVSPVLFQEALQHVPAHAVVVEIAPHALLQAVLKRSLESSCTIIP 783
Query: 768 LTQRENANSVLYLLQALGKLYESGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWY 827
L ++++ +++ + L +G+L+ +GV + L+P ++FP RGTP+ISP ++W+HS+ W
Sbjct: 784 LMKKDHRDNLEFFLSNVGRLHLAGVSVNPNGLFPPVEFPAPRGTPLISPHIKWDHSQAWD 843
Query: 828 VTTYRMQEKLKSGERTVVVS---LKDDEMEFVSGHMIDGRNLFPATGYL 873
V + S V + ++ H IDGR LFP TGYL
Sbjct: 844 VPSAADFPSGSSCSSVAVYKFDVSPESPDHYLVDHCIDGRVLFPGTGYL 892
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 328 bits (842), Expect = 1e-98
Identities = 152/410 (37%), Positives = 213/410 (51%), Gaps = 23/410 (5%)
Query: 3 PAPNSPAPAKL------TSKELALKAGRRLARPAPGDE-ICITGIAGVFP-DSTDVRDFG 54
N KL T EL R E I I G+A FP D F
Sbjct: 2 SGDNGMTEEKLRRYLKRTVTELDSVTARLREVEHRAGEPIAIVGMACRFPGDVDSPESFW 61
Query: 55 EKLNNKVDLISD--DDRRWKLGKEHPEIPQRTGK-LYEVNKFDAAFFGVHFKQAHTMDPM 111
E ++ D I++ DR W P+ R G L FDA FFG+ ++A MDP
Sbjct: 62 EFVSGGGDAIAEAPADRGW-----EPDPDARLGGMLAAAGDFDAGFFGISPREALAMDPQ 116
Query: 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRA 171
RI+LE ++EA+ AG +P SLRGS TGVF G + ++ G+ TG + +
Sbjct: 117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASS 176
Query: 172 MLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL 231
+ + RV+Y LG+ GP+ TVD+ACSS L AL A +S+R C A GG + P
Sbjct: 177 VASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFT 236
Query: 232 QFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKR----VYARVVHAKTNCD 287
+F G L+ DGRCK F +AA+G+ +E ++ LQ+ A+R V A + + N D
Sbjct: 237 EFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQD 296
Query: 288 GYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCP 347
G G+T PSG QQR++ V ++ ++EAHGTGT++GDP EV AL + +
Sbjct: 297 G-ASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGA 355
Query: 348 GRTT--PLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
R PL IGSVKSNIGH++ A+GV V K +LA+ +G +P ++F P
Sbjct: 356 ERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEP 405
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 3e-36
Identities = 79/363 (21%), Positives = 142/363 (39%), Gaps = 62/363 (17%)
Query: 464 FVFSGMGSQWDGMGTELMEI-PIFAATIEKLQAVLKPK-GVDVKRIITD---------TN 512
VF G G+QW GM +L+ +FA +I + L P + +++
Sbjct: 555 MVFPGQGAQWQGMARDLLRESQVFADSIRDCERALAPHVDWSLTDLLSGARPLDRVDVVQ 614
Query: 513 PKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQ--TI 570
P +F A+ + L + R+ + P ++GHS GE+ A+ G T+E +
Sbjct: 615 PALF-----------AVMVSLAALWRSHGVEPAAVVGHSQGEIAAAHVAGALTLEDAAKL 663
Query: 571 LAAYYRGLASVETEFIRGAMAAVGLGYKDLRSR---CPPEIEVACHNSPDSSTISGPEEN 627
+A R L + +G MA+ GLG + R + +A N P S ++G
Sbjct: 664 VAVRSRVLRRLGG---QGGMASFGLGTEQAAERIGRFAGALSIASVNGPRSVVVAGESGP 720
Query: 628 VKKFVAELQADNIFARTINV--ANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHV 685
+ + +AE +A+ AR I V A+ H+P + +R + + A +
Sbjct: 721 LDELIAECEAEAHKARRIPVDYAS---HSP-------------QVESLREEL-LTELAGI 763
Query: 686 KFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAIT--L 743
ST+ + T + Y NL V F++ +R + + +
Sbjct: 764 SPVS-AD-VALYSTTTGQPIDTATM----DTAYWYANLREQVRFQDATRQLAEAGFDAFV 817
Query: 744 EIAPHGLLQAILRRSLPKTVTN-----VSLTQRENANSVLYLLQALGKLYESGVHPHLAN 798
E++PH +L + +L + V T R + + ALG+ Y GV +
Sbjct: 818 EVSPHPVLTVGIEATLDSALPADAGACVVGTLRRDRGGLADFHTALGEAYAQGVEVDWSP 877
Query: 799 LYP 801
+
Sbjct: 878 AFA 880
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 323 bits (831), Expect = 5e-97
Identities = 145/406 (35%), Positives = 221/406 (54%), Gaps = 33/406 (8%)
Query: 33 DE-ICITGIAGVFP-DSTDVRDFGEKLNNKVDLISD--DDRRWKLGKEHPEIPQRTGK-- 86
+ I I +A P + E L + +S DR W L + H P G
Sbjct: 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSY 64
Query: 87 ------LYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGV 140
L + FDA FFGV ++A MDP R++LE ++E V +AGI+P SLRG+ TGV
Sbjct: 65 VDKGGFLDDAAGFDAEFFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGV 124
Query: 141 FIGACFSESEKTWFYEKL-----QINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACS 195
F+G Y + + G+ +TG + A+ + R+SY +G+ GPS +VD+ACS
Sbjct: 125 FLGVAKFG------YGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEGPSISVDTACS 178
Query: 196 SSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGY 255
SSL AL A +S+R G + A VGG + P V + F+R L+ DGR K+F A+G+
Sbjct: 179 SSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGF 238
Query: 256 CRSEAVCIMYLQKSKDAKR----VYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYS 311
SE V ++ L++ +A+R V A V + N DG G++ PSG Q+R++
Sbjct: 239 GFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDG-ASNGLSAPSGPAQRRVIRQALE 297
Query: 312 ECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTT--PLLIGSVKSNIGHSEPAS 369
C ++P ++ +EAHGTGT +GDP E AL + + R PL +GSVKSNIGH++ A+
Sbjct: 298 SCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAA 357
Query: 370 GVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQL--ESRP 413
GV + KV+LA+ NG +P ++ + P + + +G + L ++P
Sbjct: 358 GVTGLLKVVLALRNGELPATLHVEEPTPHVD-WSSGGVALLAGNQP 402
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 3e-36
Identities = 85/373 (22%), Positives = 144/373 (38%), Gaps = 64/373 (17%)
Query: 456 PGDTRPLWFVFSGMGSQWDGMGTELMEI-PIFAATIEKLQAVLKPKG----VDVKRIITD 510
D R + F+F G GSQW GMG EL+ P+FA I + P DV R
Sbjct: 528 EVDGRNVVFLFPGQGSQWAGMGAELLSSSPVFAGKIRACDESMAPMQDWKVSDVLRQAPG 587
Query: 511 ---------TNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYAD 561
P +F A+ + L ++ R+ + P ++GHS GE+ A+
Sbjct: 588 APGLDRVDVVQPVLF-----------AVMVSLAELWRSYGVEPAAVVGHSQGEIAAAHVA 636
Query: 562 GCFTVEQ--TILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSR---CPPEIEVACHNSP 616
G T+E ++ R + S+ G MAAV LG +R R + VA N P
Sbjct: 637 GALTLEDAAKLVVGRSRLMRSLSG---EGGMAAVALGEAAVRERLRPWQDRLSVAAVNGP 693
Query: 617 DSSTISGPEENVKKFVAELQADNIFARTINV--ANTEKHAPLKQCRAQRPPAPWLTDDIR 674
S +SG ++ F + A+ I R I+V A+ H+P + +R
Sbjct: 694 RSVVVSGEPGALRAFSEDCAAEGIRVRDIDVDYAS---HSP-------------QIERVR 737
Query: 675 ACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSR 734
+ + +P R + ST + + T L A Y NL V F +
Sbjct: 738 EEL-LETTGDIAPRP-AR-VTFHSTVESRSMDGTEL----DARYWYRNLRETVRFADAVT 790
Query: 735 HIQKNAIT--LEIAPHGLLQAILRRSLPKTVTNVSL----TQRENANSVLYLLQALGKLY 788
+ ++ +E++PH ++ + ++ + + + + L+++ +
Sbjct: 791 RLAESGYDAFIEVSPHPVVVQAVEEAVEEADGAEDAVVVGSLHRDGGDLSAFLRSMATAH 850
Query: 789 ESGVHPHLANLYP 801
SGV P
Sbjct: 851 VSGVDIRWDVALP 863
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 1e-32
Identities = 60/415 (14%), Positives = 114/415 (27%), Gaps = 88/415 (21%)
Query: 45 PDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHP-----EIPQRTGKLYEVNKFDAAFFG 99
D D+ + E V L+ +IP ++A +G
Sbjct: 950 GDKVDIFEIPETGEYSVKLLKGATLYIPKALRFDRLVAGQIP---------TGWNAKTYG 1000
Query: 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINP-----KSLRGSKTGVFIGACFS-----ES 149
+ +DP+ +L EA I +GI K + S+ G G+
Sbjct: 1001 ISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRG 1060
Query: 150 EKTWFYEK-------LQ---INGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLY 199
++ LQ IN M A + +GP T AC++S+
Sbjct: 1061 MFKDRFKDEPVQNDILQESFIN---------TMSAWVNMLLISSSGPIKTPVGACATSVE 1111
Query: 200 ALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----------PDGRCKSF 248
+++ ++I G VGG + S +F + S P +
Sbjct: 1112 SVDIGVETILSGKARICIVGGYDDFQEE-GSFEFGNMKATSNTLEEFEHGRTPAEMSRPA 1170
Query: 249 DEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS------ 298
NG+ ++ I + ++ A +Y V A T D G + P+
Sbjct: 1171 TTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKI---GRSVPAPGKGIL 1227
Query: 299 GALQQRLLEDFYSECEVD-------------------PKNLAWIEAHGTGTKVGDPEEVQ 339
++ Y+ ++ L ++ D E
Sbjct: 1228 TTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFL 1287
Query: 340 ALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKS 394
+ + + G+ G+ ++ S
Sbjct: 1288 LERTRE-IHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVAS 1341
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 3e-19
Identities = 36/197 (18%), Positives = 64/197 (32%), Gaps = 17/197 (8%)
Query: 239 LSPDGRCKSFDEAANGYCRSEAVCIMYLQ------KSKDAKRVYA-RVVH-----AKTNC 286
L+ R + + L+ S+D R
Sbjct: 1244 LNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLR 1303
Query: 287 DGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVF- 345
++ G + + L + + +L HGT TK D E + +
Sbjct: 1304 AAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMK 1363
Query: 346 CPGRTT--PLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFH 403
GR+ P++ K GH + A+G + + + +GIIP N N + K + F
Sbjct: 1364 HLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFE 1423
Query: 404 NGKIQLESRPLDAEYVR 420
+ S+ L + VR
Sbjct: 1424 Y--VLYPSKTLKTDGVR 1438
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 127 bits (323), Expect = 9e-32
Identities = 75/324 (23%), Positives = 121/324 (37%), Gaps = 26/324 (8%)
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINP-KSLRGSKTGVFIGA--- 144
+ F K+ +M + + + A+ DAG +S+ + GV G+
Sbjct: 56 PLPGFAQPAD-WPRKKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSG 114
Query: 145 --CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYA 200
+ T + A VS + + G SAC+S A
Sbjct: 115 SVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQA 174
Query: 201 LEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGY 255
+ +AY++I G GG P V+ F L S P + FD +G
Sbjct: 175 IGYAYENIAMGKQTLMLAGGAEELSGPAVA-VFDTLYATSTRNDEPHLTPRPFDAKRDGL 233
Query: 256 CRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYS 311
E + L++ + AK ++A +V N DG +T P+ + R ++
Sbjct: 234 VVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAH---MTQPTASTMARAMQLALE 290
Query: 312 ECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGV 371
+ ++D +A++ AHGT T GD E QA F G P I S+KS +GH+ A G
Sbjct: 291 DAKLDANAIAYVNAHGTSTDRGDVAESQATARTF--GERMP--ISSLKSYVGHTLGACGA 346
Query: 372 CSVTKVILAMENGIIPPNINFKSP 395
I M+ P +N
Sbjct: 347 LEAWWTIEMMKRNWYAPTLNLTEV 370
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 127 bits (323), Expect = 1e-31
Identities = 72/332 (21%), Positives = 139/332 (41%), Gaps = 31/332 (9%)
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA---- 144
E + A ++ MD + + EA +G++P +L ++ GV +G+
Sbjct: 52 EADFDPVAEG-FGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAA 110
Query: 145 ---------CFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACS 195
S+S + W + ++ +++ V++ +G GP V + C+
Sbjct: 111 ATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCT 170
Query: 196 SSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDE 250
S L ++ +A ++I +G + F G + + P V F + + P+ + FD
Sbjct: 171 SGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDG 230
Query: 251 AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS--GALQQR 304
+G+ +E + L+ A R++A + T C+ Y +T G
Sbjct: 231 TRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYH---MTGLKADGREMAE 287
Query: 305 LLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG-RTTPLLIGSVKSNIG 363
+ E D ++ +I AHG+GT+ D E A + G + S+KS +G
Sbjct: 288 TIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRAL--GEHARRTPVSSIKSMVG 345
Query: 364 HSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
HS A G + +LA+E+G++PP N ++
Sbjct: 346 HSLGAIGSLEIAACVLALEHGVVPPTANLRTS 377
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-31
Identities = 86/325 (26%), Positives = 143/325 (44%), Gaps = 24/325 (7%)
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA---- 144
E+ FD + + K+A MD + AV D+G+ ++ GV+IG+
Sbjct: 53 ELKDFDVEKY-LEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGG 111
Query: 145 -CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYAL 201
E++ F + +++ F + M + +VS G G + T +AC+++ ++
Sbjct: 112 METFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSI 171
Query: 202 EHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCR 257
A+K I G +A GG + F LS P+ C+ FD+ +G+
Sbjct: 172 GDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDRDGFII 231
Query: 258 SEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS--GALQQRLLEDFYS 311
E I+ L++ + AK ++YA +V D Y IT P+ G R ++
Sbjct: 232 GEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYH---ITAPAPNGEGAARAMKMAID 288
Query: 312 ECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG-RTTPLLIGSVKSNIGHSEPASG 370
+ + P + +I AHGT T D E QA++ VF G L I S KS GH+ ASG
Sbjct: 289 DAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVF--GEHAKKLAISSTKSMTGHTLGASG 346
Query: 371 VCSVTKVILAMENGIIPPNINFKSP 395
+L + + II P I+ K+
Sbjct: 347 GIEAIFALLTIRDNIIAPTIHLKNQ 371
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-31
Identities = 84/326 (25%), Positives = 140/326 (42%), Gaps = 25/326 (7%)
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA---- 144
EV FDA F + K+A MD C + + +A+ DA + L + GV IG
Sbjct: 56 EVKDFDATQF-LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGG 114
Query: 145 -CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYAL 201
E ++T +K + + F I M + + LG GP+ +AC++ A+
Sbjct: 115 LKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAI 174
Query: 202 EHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYC 256
A++ +++G+ A GG + P FA LS P + FD+ +G+
Sbjct: 175 GDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFV 234
Query: 257 RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS--GALQQRLLEDFY 310
E I+ L++ + A ++Y +V CD Y IT P G R +
Sbjct: 235 MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYH---ITAPVPDGRGATRAIAWAL 291
Query: 311 SECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG-RTTPLLIGSVKSNIGHSEPAS 369
+ + P+ +++I AHGT T D E +A++ G + + S KS GH S
Sbjct: 292 KDSGLKPEMVSYINAHGTSTPANDVTETRAIKQAL--GNHAYNIAVSSTKSMTGHLLGGS 349
Query: 370 GVCSVTKVILAMENGIIPPNINFKSP 395
G ++A+ +PP IN ++P
Sbjct: 350 GGIEAVATVMAIAEDKVPPTINLENP 375
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-31
Identities = 82/325 (25%), Positives = 144/325 (44%), Gaps = 24/325 (7%)
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA---- 144
E+ F+ + K+A MD + + EAV DA ++ + GV+IG+
Sbjct: 77 ELKNFNIEDH-IDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGG 135
Query: 145 -CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYAL 201
E +K +++ F + M +VS LG GP+ +AC++ ++
Sbjct: 136 METFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSI 195
Query: 202 EHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCR 257
A+K ++ G +A GG + F+ LS + C+ F E +G+
Sbjct: 196 GEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVM 255
Query: 258 SEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS--GALQQRLLEDFYS 311
E I+ ++ + A+ +YA +V T D Y IT P+ G R ++
Sbjct: 256 GEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYH---ITAPAPEGEGGSRAMQAAMD 312
Query: 312 ECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG-RTTPLLIGSVKSNIGHSEPASG 370
+ ++PK++ ++ AHGT T VGD EV+A++N F G L + S KS GH A+G
Sbjct: 313 DAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTF--GEAAKHLKVSSTKSMTGHLLGATG 370
Query: 371 VCSVTKVILAMENGIIPPNINFKSP 395
L++++ + P I+ +P
Sbjct: 371 GIEAIFSALSIKDSKVAPTIHAVTP 395
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-31
Identities = 69/326 (21%), Positives = 122/326 (37%), Gaps = 31/326 (9%)
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA---- 144
+++ F A + + DP R+ L A+ DA +P+SL GV
Sbjct: 58 QIDDFHAPDH-IPGRLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGG 116
Query: 145 -CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYAL 201
F+ E + + ++ + A+ ++S G+ GPS + + + L AL
Sbjct: 117 FDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDAL 176
Query: 202 EHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCR 257
HA ++IR G GG + L P+ + G +S PD FDE A GY
Sbjct: 177 GHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGYVP 235
Query: 258 SEAVCIMYLQ-----KSKDAKRVYARVVHAKTNCDGYKEQGITYP-SGALQ--QRLLEDF 309
E I+ L+ +++ Y + + D + +G + + L D
Sbjct: 236 GEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP---GSGRPAGLERAIRLALND- 291
Query: 310 YSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPAS 369
P+++ + A G G D E +A+ VF + + K+ G
Sbjct: 292 ---AGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREG---VPVTVPKTTTGRLYSGG 345
Query: 370 GVCSVTKVILAMENGIIPPNINFKSP 395
G V ++++ G+I P S
Sbjct: 346 GPLDVVTALMSLREGVIAPTAGVTSV 371
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-31
Identities = 76/327 (23%), Positives = 139/327 (42%), Gaps = 27/327 (8%)
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA---- 144
V F+ + K+ MD + + +A+ D+G+ ++ G IG+
Sbjct: 67 LVKDFNCEDI-ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGG 125
Query: 145 --CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYA 200
E T +I+ F + M+A ++ G+ GPS ++ +A +S ++
Sbjct: 126 LGLI-EENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHN 184
Query: 201 LEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGY 255
+ HA + I G + GG P F LS P + +D+ +G+
Sbjct: 185 IGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGF 244
Query: 256 CRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS--GALQQRLLEDF 309
+ ++ L++ + AK ++YA +V + D Y +T P GA + +
Sbjct: 245 VLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH---MTSPPENGAGAALAMANA 301
Query: 310 YSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG-RTTPLLIGSVKSNIGHSEPA 368
+ ++ + ++ AHGT T GD E QA++ +F G + +L+ S KS GH A
Sbjct: 302 LRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIF--GEAASRVLVSSTKSMTGHLLGA 359
Query: 369 SGVCSVTKVILAMENGIIPPNINFKSP 395
+G ILA+ + +PP IN +P
Sbjct: 360 AGAVESIYSILALRDQAVPPTINLDNP 386
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 4e-31
Identities = 69/341 (20%), Positives = 142/341 (41%), Gaps = 51/341 (14%)
Query: 92 KFDAAFFGVHF--------------KQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGS- 136
+ + H K M +A+ DAG++P++ + +
Sbjct: 38 ELKDSGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNP 97
Query: 137 KTGVFIGA------CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSY 188
+ G+ G+ + + + +T + ++ ++ ++G +Y
Sbjct: 98 RVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY 157
Query: 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PD 242
++ SAC++S + + +A + I+ G + F GG ++ +F +G LS P+
Sbjct: 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE-MACEFDAMGALSTKYNDTPE 216
Query: 243 GRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS 298
+++D +G+ + ++ +++ + A +YA +V DG + PS
Sbjct: 217 KASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD---MVAPS 273
Query: 299 GALQQR----LLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLL 354
G R + + +D ++ +HGT T VGD +E+ A+ VF G +P
Sbjct: 274 GEGAVRCMKMAMHG--VDTPID-----YLNSHGTSTPVGDVKELAAIREVF--GDKSP-A 323
Query: 355 IGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
I + K+ GHS A+GV +L +E+G I P+IN +
Sbjct: 324 ISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEEL 364
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-30
Identities = 95/341 (27%), Positives = 149/341 (43%), Gaps = 46/341 (13%)
Query: 92 KFDAAFFGVHF--------------KQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSK 137
+FDA+ V K+ +D + L A+ DAG+ P+ L +
Sbjct: 38 RFDASALPVRIAAEVDVDPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPER 97
Query: 138 TGVFIGA-----CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTV 190
G +G E++ F E+ +I+ F I M + ++ G GPS TV
Sbjct: 98 VGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTV 157
Query: 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRC 245
+AC++ AL A + I+ G + GG + P FA + LS P+
Sbjct: 158 VTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKAS 217
Query: 246 KSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS--- 298
+ F + +G+ E ++ L+ + AK R+YA +V + D + IT P
Sbjct: 218 RPFTLSRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHH---ITEPHPEG 274
Query: 299 -GALQ--QRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG-RTTPLL 354
GA R L+D + P+ + +I AHGT T VGD EV A++ VF G L+
Sbjct: 275 KGAALAMARALKD----AGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVF--GDHAKRLM 328
Query: 355 IGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
+ S KS IGH A+G + A+ +G+IPP IN + P
Sbjct: 329 VSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDP 369
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-30
Identities = 68/341 (19%), Positives = 133/341 (39%), Gaps = 51/341 (14%)
Query: 92 KFDAAFFGVHF--------------KQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSK 137
++ F + +A+ DAG+ + + +
Sbjct: 59 EYAELGFRCQVHGAPDIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNER 118
Query: 138 TGVFIG---ACFSESEKTWFYEKLQING------FGITGCSRAMLANRVSYWLGVNGPSY 188
TG+ +G + + + G F + + + ++ + + G +Y
Sbjct: 119 TGIIMGSGGPSTRTIVDS--ADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINY 176
Query: 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PD 242
++ SAC++S + + +AY+ I+ G + F GGC +S+ F +G +S P
Sbjct: 177 SISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWT-LSVLFDAMGAMSSKYNDTPS 235
Query: 243 GRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS 298
+++D+ +G+ + ++ L+ + A ++Y +V DGY + PS
Sbjct: 236 TASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYD---MVAPS 292
Query: 299 GALQQRL----LEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLL 354
G R L ++D +I H T T GD E++A+ +F G P
Sbjct: 293 GEGAIRCMKMALST--VTSKID-----YINPHATSTPAGDAPEIEAIRQIFGAGDVCP-P 344
Query: 355 IGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
I + KS GHS A+GV +L M+N I + + +
Sbjct: 345 IAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEEL 385
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Length = 401 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 4e-30
Identities = 58/361 (16%), Positives = 96/361 (26%), Gaps = 57/361 (15%)
Query: 450 RSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKP--KGVDVKRI 507
R G + +F G + + A
Sbjct: 87 RGLFLVVGGPLRVGLLFPGQAAPVHADR------GALGHLLGDADAGTGSDPDSGVKPAE 140
Query: 508 ITDTN---PKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCF 564
DT P + A + + L L P +GHS+GEL G
Sbjct: 141 PVDTAVAQPAII-----------ADSLAGIRWLDRLGARPVGALGHSLGELAALSWAGAL 189
Query: 565 TVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRC-PPEIEVACHNSPDSSTISG 623
+ T+ A RG A M ++ R VA N ++G
Sbjct: 190 DADDTLALARARGEAMSAATEAPSGMLSLRADLAAARELAAGTGAVVAVDNGERHVVVAG 249
Query: 624 PEENVKKFVAELQADNIFARTINVANTEKHA---PLKQCRAQRPPAPWLTDDIRACMKAR 680
+ + + I A + V+ HA PL AP + +R
Sbjct: 250 TRPELDRVAEAARHAGIEATPLAVS----HAFHSPLM--------APAA-EALRRAA--- 293
Query: 681 DRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA 740
+ ++ P S W E L PV F E + +
Sbjct: 294 --GRLPWRR-PERPVA---STVTGAWWADED---PVEVLVRQLTGPVRFREALGLLDADL 344
Query: 741 ITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLY 800
+ +E+ P +L A+ + V + A S + L+ +G +
Sbjct: 345 L-VEVGPGRMLSALAEAAGRTAV-----SLDAGAASAAGMAAGTAALFAAGAVDDATPFF 398
Query: 801 P 801
Sbjct: 399 A 399
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 6e-29
Identities = 81/328 (24%), Positives = 135/328 (41%), Gaps = 33/328 (10%)
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA---- 144
E+ F + K + D L EAV A ++ ++L + GV + +
Sbjct: 72 EIQDFPFDKY-FVKKDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGG 130
Query: 145 -CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYAL 201
E + +EK ++ + M + V+ G NG ++++ACSSS A+
Sbjct: 131 IKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAI 190
Query: 202 EHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCR 257
A++SI+ G + VGG + P+ F L LS P FD+ NG+
Sbjct: 191 GDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVM 250
Query: 258 SEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS----GALQ--QRLLE 307
E ++ L+ + A+ + A VV CD Y +T P GA++ + LE
Sbjct: 251 GEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYH---MTSPHPEGQGAIKAIKLALE 307
Query: 308 DFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEP 367
+ E+ P+ +A++ AHGT T + E A+ V G+ + + S KS GH
Sbjct: 308 E----AEISPEQVAYVNAHGTSTPANEKGESGAIVAVL--GKE--VPVSSTKSFTGHLLG 359
Query: 368 ASGVCSVTKVILAMENGIIPPNINFKSP 395
A+G I AM + +P
Sbjct: 360 AAGAVEAIVTIEAMRHNFVPMTAGTSEV 387
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 9e-27
Identities = 91/390 (23%), Positives = 158/390 (40%), Gaps = 50/390 (12%)
Query: 37 ITGIAGVFPDSTDVRDFGEKL---NNKVDLISDDDRRWKLGKEHP-----EIPQRTGKLY 88
ITGI V P ++L + + + ++ K P +P+ + +
Sbjct: 25 ITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEE-----YKSIPCSVAAYVPRGSDE-- 77
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKS-LRGSKTGVFIGA--- 144
+F+ F V +M + + A+ D+G +P+S TGV IG
Sbjct: 78 --GQFNEQNF-VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMI 134
Query: 145 --CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYA 200
F K +++ F + M A +VS + GP++ V +AC++ +A
Sbjct: 135 PLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHA 194
Query: 201 LEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYC 256
+ +++ I G + GG + C+ P F+R LS P C+ F +G+
Sbjct: 195 VGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRDGFV 254
Query: 257 RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS----GALQ--QRLL 306
E ++ L++ + A R+YA V+ + D IT P GAL+ L
Sbjct: 255 MGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGH---ITAPDPEGEGALRCMAAAL 311
Query: 307 EDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG-RTTPLLIGSVKSNIGHS 365
+D V P+ +++I AH T T +GD E +A++++F L + S K GH
Sbjct: 312 KD----AGVQPEEISYINAHATSTPLGDAAENKAIKHLF--KDHAYALAVSSTKGATGHL 365
Query: 366 EPASGVCSVTKVILAMENGIIPPNINFKSP 395
A+G LA +PP +N
Sbjct: 366 LGAAGAVEAAFTTLACYYQKLPPTLNLDCS 395
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-26
Identities = 89/397 (22%), Positives = 151/397 (38%), Gaps = 49/397 (12%)
Query: 37 ITGIAGVFPDSTDVRDFGEKL---NNKVDLISDDDRRWKLGKEHPEIPQRTG-------- 85
+TG+ V P V +L + ++ DD + K E ++
Sbjct: 5 VTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAF 64
Query: 86 --KLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKS-LRGSKTGVFI 142
+FD A + + + + EA+ DA P +TGV I
Sbjct: 65 VPYGSNPGEFDEA----LWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSI 120
Query: 143 GA-----CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACS 195
G C EK +++ F I M + VS G GP++ +AC+
Sbjct: 121 GGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACA 180
Query: 196 SSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFD 249
+ +++ A + I+ G + GG + F+R LS P + FD
Sbjct: 181 TGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFD 240
Query: 250 EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS----GAL 301
+G+ E ++ L++ + AK ++YA + + D + IT P GA+
Sbjct: 241 CDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHH---ITQPPEDGKGAV 297
Query: 302 Q--QRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCP-GRTTPLLIGSV 358
R L + P + ++ AH T T +GD E +A++ VF + L S
Sbjct: 298 LAMTRALRQ----SGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSST 353
Query: 359 KSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
K GH A+G ILA+ +G+ P +N K+P
Sbjct: 354 KGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 390
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-26
Identities = 89/392 (22%), Positives = 150/392 (38%), Gaps = 51/392 (13%)
Query: 37 ITGIAGVFPDSTDVRDFGEKL---NNKVDLISDDDRRWKLGKEHP-----EIPQRTGKLY 88
+TGI V P ++L + + + DD E +
Sbjct: 28 VTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDI-----AGELSAKVGGTVQDVAED-- 80
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKS-LRGSKTGVFIGA--- 144
FD V K+ MD ++ + EA+ +AG P++ + +T + +
Sbjct: 81 PEGGFDPERS-VPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIG 139
Query: 145 --CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYA 200
+ +++ F I + A ++S GP +AC++S+ A
Sbjct: 140 GFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQA 199
Query: 201 LEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQ-FARLGVLS------PDGRCKSFDEAAN 253
+ A + IR G + GG VSL FA LS P + FD +
Sbjct: 200 IGDAMRMIRTGEADVVLAGGAEAAFDK-VSLGGFAAARALSTGFSEEPVRASRPFDRDRD 258
Query: 254 GYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS----GALQ--Q 303
G+ E ++ ++ A R A ++ T D Y +T GA++ +
Sbjct: 259 GFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYH---MTAGPDDGSGAMRAMK 315
Query: 304 RLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIG 363
L +V P+ + ++ AH T T VGD E++AL+ VF G I S KS G
Sbjct: 316 LALRM----GDVAPEQVDYVNAHATSTPVGDAGEIEALKTVF--GVGAGPAISSTKSATG 369
Query: 364 HSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
H A+G ILA+ +G++P +N + P
Sbjct: 370 HLLGAAGAIEAAFSILALRDGVLPGTLNLEHP 401
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 2e-26
Identities = 74/387 (19%), Positives = 140/387 (36%), Gaps = 54/387 (13%)
Query: 37 ITGIAGVFPDSTDVRDFGEKL---NNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKF 93
+T + S D+ + L + + + D+ ++ + G + K
Sbjct: 16 VTAVTATTSISPDIESTWKGLLAGESGIHALEDEF------VTKWDLAVKIGG--HL-KD 66
Query: 94 DAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFS------ 147
+ M + R+ + AG + + V +G +
Sbjct: 67 PVDSH-MGRLDMRRMSYVQRMGKLLGGQLWESAGSPE--VDPDRFAVVVG---TGLGGAE 120
Query: 148 --ESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEH 203
+++ + A + LG T SACSS A+ H
Sbjct: 121 RIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAH 180
Query: 204 AYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRS 258
A++ I G + A GG + F+ + +S P+ + FD+ +G+
Sbjct: 181 AWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFG 240
Query: 259 EAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS----GALQ--QRLLED 308
EA +M ++ + AK + AR++ A D + + P+ A + R LE
Sbjct: 241 EAGALMLIETEEHAKARGAKPLARLLGAGITSDAFH---MVAPAADGVRAGRAMTRSLEL 297
Query: 309 FYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPA 368
+ P ++ + AHGT T +GD E A+ + + KS +GHS A
Sbjct: 298 ----AGLSPADIDHVNAHGTATPIGDAAEANAIRVAG--CDQAA--VYAPKSALGHSIGA 349
Query: 369 SGVCSVTKVILAMENGIIPPNINFKSP 395
G +L + +G+IPP +N+++P
Sbjct: 350 VGALESVLTVLTLRDGVIPPTLNYETP 376
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-25
Identities = 82/387 (21%), Positives = 147/387 (37%), Gaps = 52/387 (13%)
Query: 37 ITGIAGVFPDSTDVRDFGEKL---NNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKF 93
+TGIA +TD + L + + + D E ++P R G +
Sbjct: 32 VTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPF------VEEFDLPVRIGG--HL-LE 82
Query: 94 DAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGA---CFSESE 150
+ + + M + R+ + +AG + ++ V IG E
Sbjct: 83 EFDHQ-LTRIELRRMGYLQRMSTVLSRRLWENAGSPE--VDTNRLMVSIGTGLGSAEELV 139
Query: 151 KTWFYEKLQING------FGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHA 204
+ Y+ ++ G + A V T SAC+S A+ A
Sbjct: 140 FS--YDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARA 197
Query: 205 YKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFDEAANGYCRS 258
++ I G +AA GG + FA++ ++ P G C+ FD +G+
Sbjct: 198 WQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFG 257
Query: 259 EAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS----GALQ--QRLLED 308
E ++ ++ + AK + AR++ A DG+ + P A R ++
Sbjct: 258 EGGALLLIETEEHAKARGANILARIMGASITSDGFH---MVAPDPNGERAGHAITRAIQL 314
Query: 309 FYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPA 368
+ P ++ + AH TGT+VGD E +A+ N R + + KS +GHS A
Sbjct: 315 ----AGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNR---PAVYAPKSALGHSVGA 367
Query: 369 SGVCSVTKVILAMENGIIPPNINFKSP 395
G +LA+ + +IPP +N +
Sbjct: 368 VGAVESILTVLALRDQVIPPTLNLVNL 394
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 1e-24
Identities = 91/392 (23%), Positives = 162/392 (41%), Gaps = 52/392 (13%)
Query: 37 ITGIAGVFPDSTDVRDFGEKL---NNKVDLISDDDRRWKLGKEHP-----EIPQRTGKLY 88
ITG+ V P ++ V + ++L + +++ + + IP G
Sbjct: 14 ITGLGLVSPLASGVEETWKRLLAGESGARRVTEFE-----VDDLACQIACRIPVGDGTNG 68
Query: 89 EVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKS-LRGSKTGVFIGA--- 144
F+ + K+ +DP + +A+ DAG +P++ +TGV IG+
Sbjct: 69 T---FNPDLH-MDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIG 124
Query: 145 --CFSESEKTWFYEK--LQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYA 200
+K +I+ F I G + + VS + GP+++V +AC++ +A
Sbjct: 125 GIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHA 184
Query: 201 LEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFDEAANG 254
+ A + I G + GG + FA LS P + +DE +G
Sbjct: 185 IGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDG 244
Query: 255 YCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS----GALQ--QR 304
+ E I+ L++ + A ++YA V+ + D + IT P+ GA +
Sbjct: 245 FVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFH---ITAPTESGEGAQRCMVA 301
Query: 305 LLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG-RTTPLLIGSVKSNIG 363
L+ + P + +I AHGT T + D E+ A+E V G + + S KS+IG
Sbjct: 302 ALKR----AGIVPDEIDYINAHGTST-MADTIELGAVERVV--GEAAAKISMSSTKSSIG 354
Query: 364 HSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
H A+G LA+ + I P +N +P
Sbjct: 355 HLLGAAGAAEAVFSTLAIRDNIAPATLNLDNP 386
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 95.0 bits (236), Expect = 6e-20
Identities = 63/362 (17%), Positives = 121/362 (33%), Gaps = 53/362 (14%)
Query: 51 RDFGEKLNNKVDL--ISDDDRRWKLGKEHPEI-PQRTGKL-----YEVNK-FDAAFFGVH 101
+F + +KV++ I + + ++ + + + ++ +DA +GV
Sbjct: 1117 EEFKREHGDKVEIFEIPETGQYTVRLRKGATLLIPKALQFDRLVAGQIPTGWDARRYGVP 1176
Query: 102 FKQAHTMDPMCRIILEKTYEAVIDAGINP-----KSLRGSKTGVFIGACFS-----ESEK 151
+DP+ +L EA++ +GI K + S+ G IG+
Sbjct: 1177 EDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMY 1236
Query: 152 TWFYEKLQI-NGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRD 210
Y + M A L GP T AC++++ +L+ Y +I
Sbjct: 1237 KDRYLDKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQ 1296
Query: 211 GHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----------PDGRCKSFDEAANGYCRSE 259
G VGG + S +FA +G S P + NG+ S+
Sbjct: 1297 GKARVCLVGGFD-DFQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQ 1355
Query: 260 AVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS---GALQ---------- 302
+ + ++ A +Y V T D G + P+ G L
Sbjct: 1356 GCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKI---GRSVPAPGQGVLTTAREKSGNFP 1412
Query: 303 QRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNI 362
LL+ Y +++ + I+ + EEV A+++ ++
Sbjct: 1413 SPLLDIKYRRRQLELR-RQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERT 1471
Query: 363 GH 364
H
Sbjct: 1472 EH 1473
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 3e-12
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 5/109 (4%)
Query: 315 VDPKNLAWIEAHGTGTKVGDPEEVQALENVF-CPGRTT--PLLIGSVKSNIGHSEPASGV 371
+ +L HGT T D E + GRT +L K GH + A+G
Sbjct: 1512 LTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGA 1571
Query: 372 CSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLESRPLDAEYVR 420
+ + + GI+P N N + K + F I SR + + ++
Sbjct: 1572 WMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDY--IVYPSRSIKTDGIK 1618
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 84.6 bits (209), Expect = 9e-17
Identities = 57/406 (14%), Positives = 112/406 (27%), Gaps = 70/406 (17%)
Query: 45 PDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHP-----EIPQRTGKLYEVNKFDAAFFG 99
D D+ + E V L+ +IP ++A +G
Sbjct: 1149 GDKVDIFEIPETGEYSVKLLKGATLYIPKALRFDRLVAGQIP---------TGWNAKTYG 1199
Query: 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINP-----KSLRGSKTGVFIGACFS-----ES 149
+ +DP+ +L EA I +GI K + S+ G G+
Sbjct: 1200 ISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRG 1259
Query: 150 EKTWFYEKLQI-NGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSI 208
++ + N M A + +GP T AC++S+ +++ ++I
Sbjct: 1260 MFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETI 1319
Query: 209 RDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----------PDGRCKSFDEAANGYCR 257
G VGG + S +F + S P + NG+
Sbjct: 1320 LSGKARICIVGGYDDFQEE-GSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFME 1378
Query: 258 SEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPS------GALQQRLLE 307
++ I + ++ A +Y V A T D G + P+ ++
Sbjct: 1379 AQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKI---GRSVPAPGKGILTTAREHHSS 1435
Query: 308 DFYSECEVD-------------------PKNLAWIEAHGTGTKVGDPEEVQALENVFCPG 348
Y+ ++ L ++ D E
Sbjct: 1436 VKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTRE-IH 1494
Query: 349 RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKS 394
+ + + G+ G+ ++ S
Sbjct: 1495 NEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVAS 1540
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 80.4 bits (198), Expect = 2e-15
Identities = 34/197 (17%), Positives = 61/197 (30%), Gaps = 17/197 (8%)
Query: 239 LSPDGRCKSFDEAANGYCRSEAVCIMYLQ------KSKDAKRVYA-RVVH-----AKTNC 286
L+ R + + L+ S+D R
Sbjct: 1443 LNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLR 1502
Query: 287 DGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVF- 345
++ G + + L + + +L HGT TK D E + +
Sbjct: 1503 AAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMK 1562
Query: 346 --CPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFH 403
P++ K GH + A+G + + + +GIIP N N + K + F
Sbjct: 1563 HLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFE 1622
Query: 404 NGKIQLESRPLDAEYVR 420
+ S+ L + VR
Sbjct: 1623 Y--VLYPSKTLKTDGVR 1637
|
| >1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Length = 317 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 2e-15
Identities = 36/194 (18%), Positives = 58/194 (29%), Gaps = 31/194 (15%)
Query: 464 FVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITD-----------TN 512
V G G+Q G T+ + +P A + + G+D+ T
Sbjct: 5 LVAPGQGAQTPGFLTDWLALPGAADRVAAWSDAI---GLDLAHFGTKADADEIRDTSVAQ 61
Query: 513 PKMFDNILNSFVGIAAIQI----GLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQ 568
P + GI + V TP + GHSVGE+ A G
Sbjct: 62 PLLV------AAGILSAAALGTQTSVADATGPGFTPGAVAGHSVGEITAAVFAGVLDDTA 115
Query: 569 TILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRCPPE-IEVACHNSPDSSTISG 623
+ RGLA + M+A+ G + + + A N +G
Sbjct: 116 ALSLVRRRGLAMAEAAAVT--ETGMSALLGGDPEVSVAHLERLGLTPANVNGAGQIVAAG 173
Query: 624 PEENVKKFVAELQA 637
E + +
Sbjct: 174 TMEQLAALNEDKPE 187
|
| >3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Length = 394 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 3e-15
Identities = 49/196 (25%), Positives = 70/196 (35%), Gaps = 45/196 (22%)
Query: 464 FVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITD-----------TN 512
F+F G GSQ GMG L + FA + AVL G ++ + D T
Sbjct: 9 FMFPGQGSQAKGMGGALFD--RFADLTAQADAVL---GYSIRALCVDDPRDELGRTQFTQ 63
Query: 513 PKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQT 569
P ++ V TPD + GHS+GE L A GCF E
Sbjct: 64 PALY------VVNALTYYA----KCEDSGETPDFLAGHSLGEFNALLAA---GCFDFETG 110
Query: 570 ILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRC----PPEIEVACHNSPDSSTI 621
+ R + + GAMAA+ + + + +A N+P I
Sbjct: 111 LKLVARRAELMSQARD-----GAMAAIVNASREQIERTLDEHGLVDTAIANDNTPSQLVI 165
Query: 622 SGPEENVKKFVAELQA 637
SGP + + A Q
Sbjct: 166 SGPAHEIARAEALFQH 181
|
| >2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Length = 303 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 4e-15
Identities = 63/335 (18%), Positives = 108/335 (32%), Gaps = 85/335 (25%)
Query: 464 FVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITD-----------TN 512
+ G GSQ +GM + +++P A I +D+ R+ T
Sbjct: 5 LLAPGQGSQTEGMLSPWLQLPGAADQIAAWSKAA---DLDLARLGTTASTEEITDTAVAQ 61
Query: 513 PKMFDNILNSFVGIAAIQIGLVDILRAL------NITPDHIIGHSVGELGCAYADGCFTV 566
P + + A + L + GHSVGE+ G
Sbjct: 62 PLIV------AATLLA--------HQELARRCVLAGKDVIVAGHSVGEIAAYAIAGVIAA 107
Query: 567 EQTILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRCPPE-IEVACHNSPDSSTI 621
+ + A RG + TE M+AV G ++ SR + A N+
Sbjct: 108 DDAVALAATRGAEMAKACATE--PTGMSAVLGGDETEVLSRLEQLDLVPANRNAAGQIVA 165
Query: 622 SGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMK-AR 680
+G ++K + A R + VA + T M A
Sbjct: 166 AGRLTALEKLAEDPPAKAR-VRALGVA-----------------GAFHT----EFMAPAL 203
Query: 681 DR-----AHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLL----SPVLFEE 731
D A++ P +T SN + +SA + L+ PV ++
Sbjct: 204 DGFAAAAANIATAD-PTATLL---SNRDG------KPVTSAAAAMDTLVSQLTQPVRWDL 253
Query: 732 TSRHIQKNAIT--LEIAPHGLLQAILRRSLPKTVT 764
+ ++++ +T +E P G L I +R L
Sbjct: 254 CTATLREHTVTAIVEFPPAGTLSGIAKRELRGVPA 288
|
| >3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Length = 281 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 1e-14
Identities = 49/196 (25%), Positives = 73/196 (37%), Gaps = 46/196 (23%)
Query: 464 FVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITD-----------TN 512
++F G GSQ GMG L + F A + VL G ++ + D T
Sbjct: 4 YMFPGQGSQAKGMGRALFD--AFPALTARADGVL---GYSIRALCQDDPDQRLSQTQFTQ 58
Query: 513 PKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQT 569
P ++ V + R PD + GHS+GE L A G F E
Sbjct: 59 PALY------VVNALSYL-----KRREEEAPPDFLAGHSLGEFSALFAA---GVFDFETG 104
Query: 570 ILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRCP----PEIEVACHNSPDSSTI 621
+ RG + G MAAV GL + +R +++A NSP I
Sbjct: 105 LALVKKRGELMGDARG-----GGMAAVIGLDEERVRELLDQNGATAVDIANLNSPSQVVI 159
Query: 622 SGPEENVKKFVAELQA 637
SG ++ + + +A
Sbjct: 160 SGAKDEIARLQVPFEA 175
|
| >3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Length = 318 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 1e-13
Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 41/197 (20%)
Query: 464 FVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITD-----------TN 512
FVF G GSQ GM ++ + T+++ L G D+ ++I D T
Sbjct: 13 FVFPGQGSQSVGMLNAFADVAVVRETLDEASDAL---GQDIGKLIADGPADELNLTTNTQ 69
Query: 513 PKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQT 569
P M A + +A P + GHS+GE L A G
Sbjct: 70 PVML------TAAYACYRA----WQQAGGAQPSIVAGHSLGEYTALVAA---GAIAFRDA 116
Query: 570 ILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRC----PPEI-EVACHNSPDSST 620
+ +R A +V G MAA+ GL +R+ C + E N+P
Sbjct: 117 LPLVRFRAQAMQTAVPVG--VGGMAAILGLDDDTVRAVCAEASATGVVEAVNFNAPAQVV 174
Query: 621 ISGPEENVKKFVAELQA 637
I+G + ++K +
Sbjct: 175 IAGTKAGIEKACEIAKE 191
|
| >3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Length = 336 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 2e-13
Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 43/198 (21%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITD-----------T 511
F+F+G G+Q+ GMG E + ++ L G+D++ + + T
Sbjct: 6 FLFAGQGAQYVGMGKEFFDNFEESKEVFKRSSEAL---GIDMEELCFNDPEGLLNKTEFT 62
Query: 512 NPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQ 568
P + +A + L L + G S+GE L + G E
Sbjct: 63 QPAII------TTNMAILT-----ALDKLGVKSHISCGLSLGEYSALIHS---GAINFED 108
Query: 569 TILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRCPP-----EIEVACHNSPDSS 619
+ RG +V G M AV + + + +E A +NSP
Sbjct: 109 GVKLVKKRGKFMQEAVAEG--IGGMVAVLRMTPEQVDEIIEKSSPYGIVEGANYNSPGQI 166
Query: 620 TISGPEENVKKFVAELQA 637
ISG ++K + ++
Sbjct: 167 VISGELVALEKAMEFIKE 184
|
| >3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Length = 307 | Back alignment and structure |
|---|
Score = 70.2 bits (173), Expect = 4e-13
Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 42/197 (21%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRII---------TD-TN 512
F+F+G G+Q+ GMG + + PI TI++ VL G D++ +I T T
Sbjct: 6 FLFAGQGAQYLGMGRDFYDQYPIVKETIDRASQVL---GYDLRYLIDTEEDKLNQTRYTQ 62
Query: 513 PKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQT 569
P + +A + +L+ PD + G S+GE L + G E
Sbjct: 63 PAIL------ATSVAIYR-----LLQEKGYQPDMVAGLSLGEYSALVAS---GALDFEDA 108
Query: 570 ILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRC----PPEI-EVACHNSPDSST 620
+ RG + + G M AV + + C + A +N+P
Sbjct: 109 VALVAKRGAYMEEAAPAD--SGKMVAVLNTPVEVIEEACQKASELGVVTPANYNTPAQIV 166
Query: 621 ISGPEENVKKFVAELQA 637
I+G V + V LQ
Sbjct: 167 IAGEVVAVDRAVELLQE 183
|
| >2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Length = 321 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 2e-12
Identities = 41/194 (21%), Positives = 73/194 (37%), Gaps = 36/194 (18%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITD----------TN 512
+F G GSQ GMG E + E+ L VD+K+ + + T
Sbjct: 17 LLFPGQGSQCIGMGKSFYEGHTLAKELFERASNAL---KVDMKKTLFEENELLKESAYTQ 73
Query: 513 PKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQT 569
P ++ V A Q L++ + P +GHS+GE + + G E+
Sbjct: 74 PAIY------LVSYIAYQ--LLNKQANGGLKPVFALGHSLGEVSAVSLS---GALDFEKA 122
Query: 570 ILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRCP--PEIEVACHNSPDSSTISG 623
+ + RG + + +M V G+ + L S C + A N ++G
Sbjct: 123 LKLTHQRGKMMQEACANK--DASMMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAG 180
Query: 624 PEENVKKFVAELQA 637
++++K L+
Sbjct: 181 VKDDLKALEPTLKE 194
|
| >3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Length = 316 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 2e-12
Identities = 45/200 (22%), Positives = 69/200 (34%), Gaps = 48/200 (24%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITD-----------T 511
+F G G+Q GM +L + L D+ + T
Sbjct: 14 IIFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTL---DFDILETMFTDEEGKLGETENT 70
Query: 512 NPKMFDNILNSFVGIAAIQIGLVDILRAL-NITPDHIIGHSVGE---LGCAYADGCFTVE 567
P + A +L AL N+ PD +GHS+GE L A + E
Sbjct: 71 QPALL------THSSA--------LLAALKNLNPDFTMGHSLGEYSSLVAA---DVLSFE 113
Query: 568 QTILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRCPPE------IEVACHNSPD 617
+ RG + T G+MAAV GL + + C IE A N P
Sbjct: 114 DAVKIVRKRGQLMAQAFPTG--VGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPG 171
Query: 618 SSTISGPEENVKKFVAELQA 637
+SG + + + V + ++
Sbjct: 172 QIVVSGHKALIDELVEKGKS 191
|
| >2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Length = 339 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 6e-12
Identities = 44/205 (21%), Positives = 65/205 (31%), Gaps = 46/205 (22%)
Query: 464 FVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITD-----------TN 512
+F G GSQ GMG L+ P + VL G D+ +
Sbjct: 29 LLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVL---GYDLLELSLHGPQETLDRTVHCQ 85
Query: 513 PKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQT 569
P +F +AA++ L + ++ G SVGE L A G +
Sbjct: 86 PAIF------VASLAAVEK-LHHLQPSVIENCVAAAGFSVGEFAALVFA---GAMEFAEG 135
Query: 570 ILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRC-------------PPEIEVAC 612
+ A R A + E M +V G C P EV+
Sbjct: 136 LYAVKIRAEAMQEASEAV--PSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSN 193
Query: 613 HNSPDSSTISGPEENVKKFVAELQA 637
+ PD ISG +E ++
Sbjct: 194 YLFPDCRVISGHQEALRFLQKNSSK 218
|
| >3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Length = 316 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 7e-12
Identities = 50/198 (25%), Positives = 74/198 (37%), Gaps = 42/198 (21%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITD-----------T 511
FVF G GSQ GM EL PI T ++ + L D+ ++ T
Sbjct: 10 FVFPGQGSQHLGMLAELGLQQPIVLETFQQASSAL---AYDLWALVQHGPQERLDQTQFT 66
Query: 512 NPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQ 568
P + +A + P + GHS+GE L CA G E+
Sbjct: 67 QPALL------TADVAIFRC----WEALGGPKPQVMAGHSLGEYAALVCA---GALKFEE 113
Query: 569 TILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRC----PPEI-EVACHNSPDSS 619
+ RG +V GAM A+ GL ++ S C ++ + A NS D +
Sbjct: 114 AVKLVEKRGQYMQEAVPVG--EGAMGAIIGLNEAEIESICENAALGQVVQPANLNSTDQT 171
Query: 620 TISGPEENVKKFVAELQA 637
ISG E V + + +
Sbjct: 172 VISGHSEAVDRALNMAKT 189
|
| >1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Length = 309 | Back alignment and structure |
|---|
Score = 65.6 bits (161), Expect = 1e-11
Identities = 50/202 (24%), Positives = 71/202 (35%), Gaps = 50/202 (24%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITD-----------T 511
FVF G GSQ GM ++ PI T + A L G D+ + T
Sbjct: 6 FVFPGQGSQTVGMLADMAASYPIVEETFAEASAAL---GYDLWALTQQGPAEELNKTWQT 62
Query: 512 NPKMFDNILNSFVGIAAIQIGLVDILRAL----NITPDHIIGHSVGE---LGCAYADGCF 564
P + +A + R P + GHS+GE L CA G
Sbjct: 63 QPALL------TASVA--------LYRVWQQQGGKAPAMMAGHSLGEYSALVCA---GVI 105
Query: 565 TVEQTILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRC----PPEI-EVACHNS 615
+ RG +V GAMAA+ GL + C ++ NS
Sbjct: 106 DFADAVRLVEMRGKFMQEAVPEG--TGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNS 163
Query: 616 PDSSTISGPEENVKKFVAELQA 637
P I+G +E V++ A +A
Sbjct: 164 PGQVVIAGHKEAVERAGAACKA 185
|
| >2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 305 | Back alignment and structure |
|---|
Score = 65.2 bits (160), Expect = 1e-11
Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 42/196 (21%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITD-----------T 511
+F G GS GMG L E P +++ +A L + +++ +
Sbjct: 4 ALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALP----GLLKLMWEGPEEALTLTENQ 59
Query: 512 NPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQ 568
P + G AA + L A P GHS+GE A G +E
Sbjct: 60 QPALL------AAGYAAYRA----FLEAGGKPPALAAGHSLGEWTAHVAA---GTLELED 106
Query: 569 TILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRCPPEIEV---ACHNSPDSSTI 621
+ RG +V GAMAAV L ++++ +E A N+P+ + I
Sbjct: 107 ALRLVRLRGRYMQEAVPVG--EGAMAAVLKLPLEEIQKAL-EGLEGVEIANLNAPEQTVI 163
Query: 622 SGPEENVKKFVAELQA 637
SG + V++ L+
Sbjct: 164 SGRRQAVEEAAERLKE 179
|
| >3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Length = 314 | Back alignment and structure |
|---|
Score = 65.2 bits (160), Expect = 2e-11
Identities = 50/202 (24%), Positives = 66/202 (32%), Gaps = 50/202 (24%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITD-----------T 511
FVF G GSQ GM EL E P T + GVD+ + T
Sbjct: 8 FVFPGQGSQSLGMLAELSELHPQIRETFAEASEGA---GVDLWALSQGGPEEMLNRTEYT 64
Query: 512 NPKMFDNILNSFVGIAAIQIGLVDILRAL----NITPDHIIGHSVGE---LGCAYADGCF 564
P + G+A + R P + GHS+GE L A G
Sbjct: 65 QPALL------AAGVA--------VWRLWTAQRGQRPALLAGHSLGEYTALVAA---GVL 107
Query: 565 TVEQTILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRC----PPEI-EVACHNS 615
++ RG + GAMAAV G + C ++ A NS
Sbjct: 108 SLHDGAHLVRLRGQFMQAAAPAG--VGAMAAVLGAEDAVVLEVCAEAAGSQVVVPANFNS 165
Query: 616 PDSSTISGPEENVKKFVAELQA 637
P I G V + +A L
Sbjct: 166 PGQIVIGGDAAAVDRALALLAE 187
|
| >2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 | Back alignment and structure |
|---|
Score = 66.2 bits (161), Expect = 4e-11
Identities = 38/278 (13%), Positives = 84/278 (30%), Gaps = 68/278 (24%)
Query: 427 SDDIAGHMYRGYTILSANSDKKIRSS--THYPGDTRPLWFVFSGMGSQWDGMGTELMEI- 483
+ ++ + + DKK S+ L +F G G+ D EL ++
Sbjct: 119 TKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFE-ELRDLY 177
Query: 484 ----PIFAATIEKLQAVLK-------------PKGVDVKRIITDTNPKMFDNIL----NS 522
+ I+ L +G+++ + + + + L S
Sbjct: 178 QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPIS 237
Query: 523 FVGIAAIQIGLVDIL-RALNITPD-------HIIGHSVGELGCAYADGCFT-------VE 567
I IQ+ + + L TP GHS G + + V
Sbjct: 238 CPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVR 297
Query: 568 QTILAAYYRGLASVET---EFIRGA---------------MAAV-GLGYKDLRSRC---- 604
+ I ++ G+ E + + M ++ L + ++
Sbjct: 298 KAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTN 357
Query: 605 -----PPEIEVACHNSPDSSTISGPEENVKKFVAELQA 637
++E++ N + +SGP +++ L+
Sbjct: 358 SHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRK 395
|
| >2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 4e-05
Identities = 27/205 (13%), Positives = 57/205 (27%), Gaps = 28/205 (13%)
Query: 462 LWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILN 521
L F G + M K + + K + +
Sbjct: 1717 LTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQF 1776
Query: 522 SFVGIAAIQIGLVDILRALNITPDHII--GHSVGE---LGCAYADGCFTVEQTILAAYYR 576
+ + ++ + L++ + P GHS+GE L ++E + +YR
Sbjct: 1777 TQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASL--ADVMSIESLVEVVFYR 1834
Query: 577 GLA---SV---ETEFIRGAMAAV-------GLGYKDLRSRCPPE-------IEVACHNSP 616
G+ +V E M A+ + L+ +E+ +N
Sbjct: 1835 GMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVE 1894
Query: 617 DSST-ISGPEENVKKFVAELQADNI 640
+ +G + L +
Sbjct: 1895 NQQYVAAGDLRALDTVTNVLNFIKL 1919
|
| >2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 | Back alignment and structure |
|---|
Score = 65.8 bits (160), Expect = 5e-11
Identities = 37/245 (15%), Positives = 78/245 (31%), Gaps = 65/245 (26%)
Query: 457 GDTRPLWFVFSGMGSQWDGMGTELMEI-----PIFAATIEKLQAVLKP------------ 499
+ ++ +F G G+ + EL EI I + +L+
Sbjct: 146 ENNVKIYSIFGGQGNIEEYFD-ELREIYTTYPSFVEDLITSIAELLQSLAREWDAVKQYP 204
Query: 500 KGVDVKRIITDTNPKMFDNIL----NSFVGIAAIQIGLVDI-LRALNITPDHI------- 547
KG+D+ + + + + + L SF I +Q+ I + L P +
Sbjct: 205 KGLDILQWLHNPESQPDTDYLVSAPVSFPLIGLVQLAHYMITCKTLGREPGELLERFSGT 264
Query: 548 IGHSVGELG---CA----YADGCFTVEQTILAAYYRGLASVET----------------- 583
GHS G + A + + ++ + ++ GL S +
Sbjct: 265 TGHSQGIVVAAAIATARTWDEFATAAKRAVELLFWIGLRSQQAYPRTSLAPSTLQDSVEN 324
Query: 584 -EFIRGAMAAV-GLGYKDLRSRC---------PPEIEVACHNSPDSSTISGPEENVKKFV 632
E M ++ L ++ I ++ NS + ++GP ++
Sbjct: 325 GEGTPTPMLSIRDLTRSAVQEHIDATNQHLPEDRHIGISLVNSARNFVVTGPPISLYGLN 384
Query: 633 AELQA 637
L+
Sbjct: 385 LRLRK 389
|
| >2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 4e-04
Identities = 35/230 (15%), Positives = 71/230 (30%), Gaps = 40/230 (17%)
Query: 473 WDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIG 532
+ M E + A K + + K + + + + + ++
Sbjct: 1743 YMSMTFETVN----ADGSIKTEKIFKEVDENSTSYTYRSPSGLLSATQFTQPALTLMEKA 1798
Query: 533 LVDILRA--LNITPDHIIGHSVGE---LGCAYADGCFTVEQTILAAYYRGLA---SV--- 581
+ +R+ L GHS+GE L +E + +YRGL +V
Sbjct: 1799 SFEDMRSKGLVQRDSTFAGHSLGEYSALVA--LADVMPIESLVSVVFYRGLTMQVAVERD 1856
Query: 582 ETEFIRGAMAAV-------GLGYKDLRSRCPP-------EIEVACHNSPDSST-ISGPEE 626
E AM AV + L+ +E+ +N + +G
Sbjct: 1857 EQGRSNYAMCAVNPSRISPTFTEQALQYVVENIAEVTGWLLEIVNYNVANMQYVAAGDLR 1916
Query: 627 NVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRAC 676
+ L + + + I++ A + Q + L + I+ C
Sbjct: 1917 ALDTLANVL--NILKMQKIDIQ-----ALM-QSMSLEDVRAHLVEIIQEC 1958
|
| >3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Length = 318 | Back alignment and structure |
|---|
Score = 63.3 bits (155), Expect = 8e-11
Identities = 49/198 (24%), Positives = 72/198 (36%), Gaps = 39/198 (19%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITD-----------T 511
F F G GSQ GMG L E E++ L + II +
Sbjct: 9 FTFPGQGSQLIGMGKVLTEQFVAARMVFEEVDDAL---SEKLSDIIFEGPADVLTLTANA 65
Query: 512 NPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGE---LGCAYADGCFTVEQ 568
P + V +A I++ + + + + GHS+GE L A G F++
Sbjct: 66 QPALM------AVSMAVIRV-MEQLGLNVEKKVKFVAGHSLGEYSALCAA---GTFSLTD 115
Query: 569 TILAAYYRGLA---SVETEFIRGAMAAV-GLGYKDLRSRC-----PPEIEVACHNSPDSS 619
T RG A +V G+MAA+ GL KD+ C ++A N
Sbjct: 116 TARLLRIRGNAMQAAVAVG--EGSMAALIGLDEKDVEEICEIVAEEGLCQIANDNGGGQI 173
Query: 620 TISGPEENVKKFVAELQA 637
ISG + V+ V
Sbjct: 174 VISGEAKAVETAVEVASQ 191
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 3e-09
Identities = 100/679 (14%), Positives = 177/679 (26%), Gaps = 247/679 (36%)
Query: 268 KSKDAKRV--YARVVHAKTNCD-----GYKEQGITYPSGAL---QQRLLEDFYSECEVDP 317
+ D K V + + +K D G L Q+ +++ F E V
Sbjct: 31 DNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE--VLR 88
Query: 318 KNLAWI-EAHGTGTK---------------------------VGDPEEVQALENVFCPGR 349
N ++ T + V + L R
Sbjct: 89 INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148
Query: 350 TTPLLI-----GSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNI-NFKSPRKDIPSFH 403
++ GS K+ + A VC KV M+ I N+ N SP +
Sbjct: 149 PAKNVLIDGVLGSGKTWV-----ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL---- 199
Query: 404 NGKIQLESRPLDAEYVRLFHEIHSDDIAGHMYRGYTILSANSDK-KIR---SSTHYPGDT 459
L+ L ++I + + + L +S + ++R S Y
Sbjct: 200 ---EMLQK---------LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE--- 244
Query: 460 RPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDV--KRIITDTNPKMFD 517
L L VL +V + F+
Sbjct: 245 NCL-----------------L---------------VLL----NVQNAKAW-----NAFN 263
Query: 518 N---ILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQT--ILA 572
IL + + D L A T + HS+ T ++ +L
Sbjct: 264 LSCKIL-----LTTRFKQVTDFLSAATTTHISLDHHSMT----------LTPDEVKSLLL 308
Query: 573 AYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVACHNSPDSSTISGPEENVKKFV 632
Y + +DL P E +P +S +
Sbjct: 309 KY------------------LDCRPQDL----PRE---VLTTNP--RRLSI--------I 333
Query: 633 AELQADNIFARTINVA--NTEKHAP-LKQCRAQRPPAPWLTDDIRACMKA----RDRAHV 685
AE D + A N N +K ++ P + R
Sbjct: 334 AESIRDGL-ATWDNWKHVNCDKLTTIIESSLNVLEP-----AEYRKMFDRLSVFPP--SA 385
Query: 686 KFQPKPRSTKWL-STSNTEANWTTHLAKYSSAEYHTNNLLS--PVLFEETSRHIQKNAIT 742
S W + L KYS E P ++ E ++
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN---- 441
Query: 743 LEIAPHGLLQAILRRSLPKTVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLAN---- 798
E A H + + ++PKT + L Y +G + HL N
Sbjct: 442 -EYALHRSI--VDHYNIPKTFDSDDLIPPYLDQ---YFYSHIG--H------HLKNIEHP 487
Query: 799 ----LYPKI--DFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEKLK--SGERTVVVSLKD 850
L+ + DF R+ +++K++ S S+ +
Sbjct: 488 ERMTLFRMVFLDF-------------RF------------LEQKIRHDSTAWNASGSILN 522
Query: 851 D--EMEFVSGHMIDGRNLF 867
+++F ++ D +
Sbjct: 523 TLQQLKFYKPYICDNDPKY 541
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 5e-07
Identities = 62/392 (15%), Positives = 122/392 (31%), Gaps = 107/392 (27%)
Query: 535 DILRALNITP---DHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMA 591
D+ +++ ++ DHII G +Q + F+ +
Sbjct: 40 DMPKSI-LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE--EMVQK--------FVEEVLR 88
Query: 592 AVGLGYKDLRSRCPPEIEVACHNSPDSSTISGPEENVKKFVAELQADN-IFARTINVANT 650
YK L S I+ P S + L DN +FA+ NV+
Sbjct: 89 I---NYKFLMSP----IKTEQ-RQP-----SMMTRMYIEQRDRLYNDNQVFAK-YNVSRL 134
Query: 651 EKHAPLKQCRAQRPPAPWLT-DDIRACMK-------ARDRAHVKFQPK-PRSTKWLSTSN 701
+ + L+Q + PA + D + K K Q K WL+ N
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY---KVQCKMDFKIFWLNLKN 191
Query: 702 TE---------ANWTTHLAK-YSSAEYHTNNLLSPVLFEETSRHIQKNAITLEIAPHGLL 751
+ ++S H++N+ + + + + + + LL
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI--KLRIHSIQAEL-RRLLKSKPYENCLL 248
Query: 752 QAILR---------------RSLPKTVT--NVSLTQRENANSVLYLLQALGKLYESGVHP 794
+L + L +T +T +A + ++ +L +
Sbjct: 249 --VLLNVQNAKAWNAFNLSCKIL---LTTRFKQVTDFLSAATTTHI--SLDHHSMTLTPD 301
Query: 795 HLANLYPKI------DFP--VSRGTP----MISPLV-----RWEHSEDW-YVTTYRMQEK 836
+ +L K D P V P +I+ + W++ W +V ++
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN---WKHVNCDKLTTI 358
Query: 837 LKSGERTVVVSLKDDEMEFVSGHMIDGRNLFP 868
++S + L+ E M D ++FP
Sbjct: 359 IESS----LNVLEPAEYR----KMFDRLSVFP 382
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 2e-06
Identities = 64/503 (12%), Positives = 125/503 (24%), Gaps = 144/503 (28%)
Query: 16 KELALKAGRRLARPAPGDEICITGIAG----VFPDSTDVRDFG--EKLNNKV-------- 61
L L+ RPA + I G+ G + K++ K+
Sbjct: 136 PYLKLRQALLELRPAKN--VLIDGVLGSGKTWVALDV-CLSYKVQCKMDFKIFWLNLKNC 192
Query: 62 -----------DLISDDDRRWKLGKEHPE-IPQRTGKLYEVNKFDAAFFGVHFKQA---- 105
L+ D W +H I R + + ++
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA--ELRRLLKSKPYENCLLVL 250
Query: 106 ---------HTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEK----- 151
+ + C+I+L ++ V D + S + + E
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT--LTPDEVKSLLL 308
Query: 152 TWF--------YEKLQINGFGITGCSRAML---ANRVSYWLGVNGPSYTVDSACSSSLYA 200
+ E L N ++ + + W VN + + SSL
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIA-ESIRDGLATWDNWKHVN--CDKLTTIIESSLNV 365
Query: 201 LE-----HAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGY 255
LE + + + F ++ P L ++ D N
Sbjct: 366 LEPAEYRKMFDRL------SVFPPSAHI---PT-----ILLSLIWFDVIKSDVMVVVNKL 411
Query: 256 CR---------SEAVCIMYLQKSKDAKRVYARVVHAK------------------TNCDG 288
+ + I + K +H D
Sbjct: 412 HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 289 YKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPG 348
Y I + ++ + +D ++E K+ G
Sbjct: 472 YFYSHIGHHLKNIEHPERMTLFRMVFLD---FRFLEQ-----KI-----RHDSTAWNASG 518
Query: 349 RTTPLL--IGSVKSNIGHSEPASG--VCSVTKVILAMENGIIPPNINFKSPRKDIPSFHN 404
L + K I ++P V ++ + +E +I S D+
Sbjct: 519 SILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLI------CSKYTDL----- 567
Query: 405 GKIQLESRPLDAEYVRLFHEIHS 427
+++ L AE +F E H
Sbjct: 568 --LRIA---LMAEDEAIFEEAHK 585
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 883 | |||
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 3tzy_A | 491 | Polyketide synthase PKS13; acyltransferase, long f | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 3ptw_A | 336 | Malonyl COA-acyl carrier protein transacylase; str | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 100.0 | |
| 2h1y_A | 321 | Malonyl coenzyme A-acyl carrier protein transacyl; | 100.0 | |
| 3ezo_A | 318 | Malonyl COA-acyl carrier protein transacylase; ssg | 100.0 | |
| 3k89_A | 314 | Malonyl COA-ACP transacylase; bacterial blight, XO | 100.0 | |
| 3im8_A | 307 | Malonyl acyl carrier protein transacylase; fatty a | 100.0 | |
| 3tqe_A | 316 | Malonyl-COA-[acyl-carrier-protein] transacylase; f | 100.0 | |
| 3qat_A | 318 | Malonyl COA-acyl carrier protein transacylase; sea | 100.0 | |
| 1mla_A | 309 | Malonyl-coenzyme A acyl carrier protein transacyla | 100.0 | |
| 2cuy_A | 305 | Malonyl COA-[acyl carrier protein] transacylase; t | 100.0 | |
| 2qc3_A | 303 | MCT, malonyl COA-acyl carrier protein transacylase | 100.0 | |
| 1nm2_A | 317 | Malonyl COA:acyl carrier protein malonyltransfera; | 100.0 | |
| 3im9_A | 316 | MCAT, MCT, malonyl COA-acyl carrier protein transa | 100.0 | |
| 3sbm_A | 281 | DISD protein, DSZD; transferase; HET: P6G; 1.35A { | 100.0 | |
| 3g87_A | 394 | Malonyl COA-acyl carrier protein transacylase; ssg | 100.0 | |
| 2c2n_A | 339 | Malonyl COA-acyl carrier protein transacylase; fat | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 2uv8_G | 2051 | Fatty acid synthase subunit beta (FAS1); fatty aci | 100.0 | |
| 2uva_G | 2060 | Fatty acid synthase beta subunits; fungal, dehydra | 100.0 | |
| 2uv8_G | 2051 | Fatty acid synthase subunit beta (FAS1); fatty aci | 100.0 | |
| 2uva_G | 2060 | Fatty acid synthase beta subunits; fungal, dehydra | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 99.97 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 99.97 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 99.96 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.96 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 99.96 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 99.96 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 99.96 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.96 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 99.96 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.95 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.95 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 99.95 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.95 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.95 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.94 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.94 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.93 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.92 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.91 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.9 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.9 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.9 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.89 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.82 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.82 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.77 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.76 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.71 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.63 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.6 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.59 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.58 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.58 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.58 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.56 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.55 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.53 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.52 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.52 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.51 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.5 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.49 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.49 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.43 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.41 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.35 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.35 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.32 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.3 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.2 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.17 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.12 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.08 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.0 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 98.72 | |
| 3kg8_A | 308 | CURJ; polyketide synthase, double hotdog fold, deh | 98.23 | |
| 3kg7_A | 293 | CURH; polyketide synthase, double hotdog fold, deh | 98.19 | |
| 3kg6_A | 285 | CURF; polyketide synthase, double hotdog fold, deh | 98.18 | |
| 3kg9_A | 296 | CURK; polyketide synthase, double hotdog fold, deh | 98.16 | |
| 3el6_A | 313 | Erythromycin dehydratase; dehydratase double hotdo | 98.08 | |
| 3hrq_A | 357 | PKS, aflatoxin biosynthesis polyketide synthase; h | 98.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 95.89 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 86.48 |
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-163 Score=1502.45 Aligned_cols=831 Identities=45% Similarity=0.847 Sum_probs=700.8
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
.++|||||||||||++.++++||++|.+|++.++++++||+.+ .+..+.+.|++.+++.||+.||||+++|++.||||
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~ 80 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAG--LYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQ 80 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTT--GGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccc--cccCcccccccCChhhcChhhcCCCHHHHhhcCHH
Confidence 4789999999999999999999999999999999988889865 23346677889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeeec
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVD 191 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv~ 191 (883)
|||+++++||||||||++++++++.++|||+|++.++|......+...+.++..+|+..+++++|||+.|||+||+++|+
T Consensus 81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~GPs~tvd 160 (965)
T 3hhd_A 81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIALD 160 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCCSCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCCCCeeeec
Confidence 99999999999999999999999999999999999998877766777788888999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccccc
Q psy1120 192 SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKD 271 (883)
Q Consensus 192 tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~ 271 (883)
++||||++||++||++|++|+||+|||||+|.+++|..+..|+++++++++|+|+|||.++|||++|||+|++|||++++
T Consensus 161 tACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~~gEGagavvL~~l~~ 240 (965)
T 3hhd_A 161 TACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLTKKSL 240 (965)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBCBBCEEEEEEEEEGGG
T ss_pred CchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCccccceEEEEEEecHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCC
Q psy1120 272 AKRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTT 351 (883)
Q Consensus 272 A~~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~ 351 (883)
|++||++|+|+++|+||.+..+++.|++.+|.++|++||++||++|+||||||+|||||++||++|++||.++|+..+..
T Consensus 241 A~~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~ 320 (965)
T 3hhd_A 241 ARRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQE 320 (965)
T ss_dssp CSSCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSS
T ss_pred cCcccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcccCCC
Confidence 99999999999999999877889999999999999999999999999999999999999999999999999999876677
Q ss_pred CeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcCCCCeee----------------------
Q psy1120 352 PLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQL---------------------- 409 (883)
Q Consensus 352 ~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~---------------------- 409 (883)
+++|||+|+||||+++|||++++||++++|+|++|||++||++|||+|+++.++++++
T Consensus 321 ~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~ 400 (965)
T 3hhd_A 321 PLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGS 400 (965)
T ss_dssp CEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSE
T ss_pred ceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCc
Confidence 8999999999999999999999999999999999999999999999997333333332
Q ss_pred ------ecCCc---------------------hHHH----------------HHHHhhhhcCCccCCceeEEEEEcCCch
Q psy1120 410 ------ESRPL---------------------DAEY----------------VRLFHEIHSDDIAGHMYRGYTILSANSD 446 (883)
Q Consensus 410 ------~~~~~---------------------~~~~----------------~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 446 (883)
++.+. ...+ ..++.++....+..+.+|.++++.+..+
T Consensus 401 Nah~il~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 480 (965)
T 3hhd_A 401 NVHIILRPNTQPPPAPAPHATLPRLLRASGRTPEAVQKLLEQGLRHSQDLAFLSMLNDIAAVPATAMPFRGYAVLGGERG 480 (965)
T ss_dssp EEEEEEEECCCCCCCCCGGGGSCEEEEEEESSHHHHHHHHHHHHHTTTCHHHHHHHHHHCCCCTTTCCEEEEEEESSSSC
T ss_pred eEEEEeccCCcccccccccccccceeecccCCHHHHHHHHHHHHhhhcccchhhHHHHHHhhhcccCcceEEEEecccch
Confidence 11100 0001 1112233333556788998877765322
Q ss_pred hhhhhcCCCCCCCCCEEEEeCCCCchhhHhhHHHhcChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHH
Q psy1120 447 KKIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGI 526 (883)
Q Consensus 447 ~~~~~~~~~~~~~~~v~fvF~GQGsq~~gMg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i 526 (883)
+..+...+...++++|||||||+||+|||++||++|+||+.+++|+++++.+|+++.++++..+++.++++.++||+|
T Consensus 481 --~~~~~~~~~~~~~v~fvF~GQGsQ~~gMg~~L~~~p~fr~~~~~~~~~l~~lg~~l~~~l~~~~~~~l~~~~~~Qpal 558 (965)
T 3hhd_A 481 --GPEVQQVPAGERPLWFICSGMGTQWRGMGLSLMRLDRFRDSILRSDEAVKPFGLKVSQLLLSTDESTFDDIVHSFVSL 558 (965)
T ss_dssp --CCEEEECCCSCCCEEEEECCSSCCCTTTTTTGGGSHHHHHHHHHHHHHHGGGTCCHHHHHHCCCTTGGGSHHHHHHHH
T ss_pred --hhhhhcccCCCCCEEEEECCCCcchhhHHHHHHhChHHHHHHHHHHHHHHHcCCCHHHHHhcCCcchhhhHHHHHHHH
Confidence 222333345567899999999999999999999999999999999999999999999999987777789999999999
Q ss_pred HHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEEcCCHHHHhhcCCC
Q psy1120 527 AAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPP 606 (883)
Q Consensus 527 ~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av~~~~~~v~~~l~~ 606 (883)
|++||||+++|++|||+|++|+|||+|||+|||+||+||++||++++++||++|++.....|+|++|+++.+++++++.+
T Consensus 559 ~a~q~AL~~ll~~~Gi~P~~v~GHS~GEiaAa~~AG~lsleda~~lv~~Rg~lm~~~~~~~G~M~AV~~~~~~v~~~l~~ 638 (965)
T 3hhd_A 559 TAIQIGLIDLLSCMGLRPDGIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQCIKEAHLPPGAMAAVGLSWEECKQRCPP 638 (965)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHTSCCCCEEEEEESSCHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHcCCCCcEEeccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhcccCCceEEEecCCHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999987655689999999999999999998
Q ss_pred CeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccc
Q psy1120 607 EIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVK 686 (883)
Q Consensus 607 ~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 686 (883)
.|+|||+|||+|+||||+.++|+++.+.|+++|+++++|+|.++||||++| + ++.+ +|++.+. .+.
T Consensus 639 ~v~iA~~NsP~~~ViSG~~~al~~l~~~l~~~g~~~~~L~v~~~AfHS~~m---~--~~~~----~~~~~l~-----~~~ 704 (965)
T 3hhd_A 639 GVVPACHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKEVRTGGMAFHSYFM---E--AIAP----PLLQELK-----KVI 704 (965)
T ss_dssp TCEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCCEEEECCSSCCCSSGGG---G--GGHH----HHHHHHH-----HHC
T ss_pred CeEEEEEcCCCCEEecCCHHHHHHHHHHHHhcCceeEecCCCCCCCcChHh---c--ccHH----HHHHHHH-----Hhh
Confidence 999999999999999999999999999999999999999994499999999 7 7777 8888887 554
Q ss_pred cCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCCEEEEECCCccchHHHHhhcCCCccEE
Q psy1120 687 FQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNV 766 (883)
Q Consensus 687 ~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~~~iEiGP~~~L~~~i~~~l~~~~~~~ 766 (883)
..++.+.++++|++++...+.....+..+++||++|+++||+|.++++.|.+.++|||||||++|+++++++++....++
T Consensus 705 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~~~fvEiGP~~~L~~~~~~~l~~~~~~~ 784 (965)
T 3hhd_A 705 REPKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKRGLKPSCTII 784 (965)
T ss_dssp SSCCBCCTTBCCSSSCGGGTTSHHHHBCCHHHHHHHHHSCBCHHHHHTTSCTTCEEEEESSSCTTHHHHHHHSCTTCEEE
T ss_pred ccCCCCcceEEeeecccccccccchhcccHHHHHHHhhCcEeHHHHHHHHhcCCEEEEeCChHHHHHHHHHHhCCCCeEE
Confidence 44556778899998876544332234468999999999999999999999989999999999999999999998778889
Q ss_pred eeccCCCcchHHHHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCCccccCCCCCCCCCcccccchhhhhhc--cCCCeEEE
Q psy1120 767 SLTQRENANSVLYLLQALGKLYESGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEK--LKSGERTV 844 (883)
Q Consensus 767 ~~~~~~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~~~~~~~~~~~~~~lP~y~w~~~~~W~~~~~~~~~~--~~~~~~~~ 844 (883)
++++|+..++..++++++++||++|++|||..+|+...++..+.+++.||+|+|||++||.+++...... .......|
T Consensus 785 ~~l~r~~~~~~~~ll~al~~L~~~G~~vd~~~~~~~~~~~~~~~~~~~lP~Y~w~~~~~w~~~~~~~~~~g~~~~~~~~~ 864 (965)
T 3hhd_A 785 PLMKKDHRDNLEFFLAGIGRLHLSGIDANPNALFPPVEFPAPRGTPLISPLIKWDHSLAWDVPAAEDFPNGSGSPSAAIY 864 (965)
T ss_dssp ECCCTTCSCHHHHHHHHHHHHHHTTCCCCGGGGSCCCCSSCCTTCCCSGGGCCCCCCSCCCCCCGGGSCC----------
T ss_pred ecccCCCCcHHHHHHHHHHHHHhCCCCCCHHHhCCCcccccCCCcccCCCCcccccccccccccccccCCCCcCCCceEE
Confidence 9999876677999999999999999999999999876666555667789999999999999876432111 11245668
Q ss_pred EEEecCCC-CCccCCCccCCeeEechHHHHHHHHhcc
Q psy1120 845 VVSLKDDE-MEFVSGHMIDGRNLFPATGYLATVCNVS 880 (883)
Q Consensus 845 ~~~l~~~~-~p~l~dH~v~g~~v~P~a~y~ema~ea~ 880 (883)
+.+++.++ +|||.||+|+|++||||++|++||+||+
T Consensus 865 ~~~~~~~~~~pwl~~H~v~g~~~~P~a~y~~~a~~a~ 901 (965)
T 3hhd_A 865 NIDTSSESPDHYLVDHTLDGRVLFPATGYLSIVWKTL 901 (965)
T ss_dssp -------------------------------------
T ss_pred EeecCccccCccccCceeCCeEecCcHHHHHHHHHHH
Confidence 88888887 8999999999999999999999999985
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-157 Score=1562.97 Aligned_cols=830 Identities=44% Similarity=0.833 Sum_probs=738.7
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|||||||||||++.++++||++|.+|+++++++++||+.+ ++..+.+.|++.+++.||+.||||+++|++.|||||
T Consensus 2 ~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~ 79 (2512)
T 2vz8_A 2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAG--LYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQL 79 (2512)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTT--GGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHH
T ss_pred CCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccc--cccCcccceecCCcccCCHhhcCCCHHHHHhcCHHH
Confidence 589999999999999999999999999999999988889875 233456778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeeecc
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDS 192 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv~t 192 (883)
|++|+++||||||||+++++++++++|||+|++.++|......+...++++..+|+..+++++||||.|||+||+++|+|
T Consensus 80 rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~Gps~tv~t 159 (2512)
T 2vz8_A 80 RMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITIDT 159 (2512)
T ss_dssp HHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCSCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCCCCceeecc
Confidence 99999999999999999999999999999999999987766666667888999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccccc
Q psy1120 193 ACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272 (883)
Q Consensus 193 acsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~A 272 (883)
|||||++|||+||++|++|+||+|||||+|.+++|..+..|+++++||++|+|||||.++|||++|||+|++|||++++|
T Consensus 160 ACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gEG~~~~vLk~l~~A 239 (2512)
T 2vz8_A 160 ACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLA 239 (2512)
T ss_dssp TTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBCEEEEEEEEEGGGC
T ss_pred HhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceeeeEEEEEEEEHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCC
Q psy1120 273 KRVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTP 352 (883)
Q Consensus 273 ~~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~ 352 (883)
++|||+|+|+++|+||++..++|+|++.+|+++|++||++||++|+||+|||+|||||++||++|++||.++|+..+..+
T Consensus 240 ~~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~ 319 (2512)
T 2vz8_A 240 RRVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGIVNALCATRREP 319 (2512)
T ss_dssp SCCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSC
T ss_pred CcccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCC
Confidence 99999999999999998777999999999999999999999999999999999999999999999999999998766678
Q ss_pred eeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcCCCCeee-----------------------
Q psy1120 353 LLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQL----------------------- 409 (883)
Q Consensus 353 ~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~----------------------- 409 (883)
++|||+|+||||+++|||++++||++++|+|++||||+||++|||+|+.+.++++++
T Consensus 320 ~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~N 399 (2512)
T 2vz8_A 320 LLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSN 399 (2512)
T ss_dssp CEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEE
T ss_pred ceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCce
Confidence 999999999999999999999999999999999999999999999997455544443
Q ss_pred -----ecCCc---------------------hH----------------HHHHHHhhhhcCCccCCceeEEEEEcCCchh
Q psy1120 410 -----ESRPL---------------------DA----------------EYVRLFHEIHSDDIAGHMYRGYTILSANSDK 447 (883)
Q Consensus 410 -----~~~~~---------------------~~----------------~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 447 (883)
++.+. .. .+..++.++....+.++.+|.++++.+..
T Consensus 400 ah~il~~~~~~~~~~~~~~~~~~~~~~sa~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-- 477 (2512)
T 2vz8_A 400 VHVILQPNSRPAPPPAQHAALPRLLQASGRTLEAVQTLLEQGLRHSRDLAFVGMLNEIAAVSPVAMPFRGYAVLGGEA-- 477 (2512)
T ss_dssp EEEEEEECCCCCCCCSSTTTCCEEEEEEESSHHHHHHHHHHHHTTTTCHHHHHHHHHHHCCCTTTCCEEEEEEESSTT--
T ss_pred eEEEEccCCccccccccccccceeeeecCCCHHHHHHHHHHHHhhhcccchhhHHHHHHhcccccCceeeeeeccCcc--
Confidence 11100 00 01111233344456778999877776532
Q ss_pred hhhhcCCCCCCCCCEEEEeCCCCchhhHhhHHHhcChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHH
Q psy1120 448 KIRSSTHYPGDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIA 527 (883)
Q Consensus 448 ~~~~~~~~~~~~~~v~fvF~GQGsq~~gMg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~ 527 (883)
.+..+.......++++|||||||+||+|||++||++|+||+.+++|+++++.+||++.++++..+++.++++.++||+||
T Consensus 478 ~~~~~~~~~~~~~~v~fvF~GQGsQ~~gMg~~L~~~p~f~~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qpal~ 557 (2512)
T 2vz8_A 478 GSQEVQQVPGSKRPVWFICSGMGAQWQGMGLSLMRLDRFRDSILRSDQALKPLGLRVSDLLLSTDEAVLDDIVSSFVSLT 557 (2512)
T ss_dssp CCEEEEECCCSCCCEEEEECCSSCCCTTTTSSTTSSHHHHHHHHHHHHHHGGGTCCHHHHHHTCCHHHHHCHHHHHHHHH
T ss_pred hhhhhhcccCCCCceEEEeCCCCCchHhHHHHHHhChHHHHHHHHHHHHHHHCCCCHHHHHhcCCccccccHHHHHHHHH
Confidence 22333333455678999999999999999999999999999999999999999999999998776667899999999999
Q ss_pred HHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEEcCCHHHHhhcCCCC
Q psy1120 528 AIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPE 607 (883)
Q Consensus 528 a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av~~~~~~v~~~l~~~ 607 (883)
++|+||+++|++|||+|++|+|||+|||+|||+||+||+|||++++++||++|++.....|+|++|+++.+++++++.++
T Consensus 558 a~q~al~~ll~~~Gi~P~~vvGHS~GEiaAa~~AG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av~~~~~~~~~~~~~~ 637 (2512)
T 2vz8_A 558 SIQIALIDLLTSLGLQPDGIIGHSLGEVACGYADGCLTQEEAVLSSYWRGYCIKEANVLPGAMAAVGLSWEECKQRCPPG 637 (2512)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSCHHHHHTTSCTT
T ss_pred HHHHHHHHHHHHcCCEEEEEEecCHhHHHHHHHcCCCCHHHHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999876556799999999999999999989
Q ss_pred eEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhcccccc
Q psy1120 608 IEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKF 687 (883)
Q Consensus 608 v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 687 (883)
++|||+|||+|+||||+.++|+++.+.|+++|+++++|+|+++||||++| + ++.+ +|++.+. .+.+
T Consensus 638 v~iA~~Nsp~s~visG~~~ai~~~~~~l~~~g~~~~~L~v~~~AfHS~~m---~--~~~~----~~~~~l~-----~~~~ 703 (2512)
T 2vz8_A 638 IVPACHNSKDTVTISGPQAAMSEFLQQLKREDVFVKEVRTGGIAFHSYFM---E--SIAP----TLLRQLR-----KVIL 703 (2512)
T ss_dssp CCEEEECSSSCEEEEEEHHHHHHHHHHHHTTTCCEEEECCTTCCCSSGGG---T--TTHH----HHHHHHH-----HHSC
T ss_pred eEEEEEcCCCCEEEECCHHHHHHHHHHHHHCCceEEEcCCCCccccHHHH---H--hHHH----HHHHHHH-----hccc
Confidence 99999999999999999999999999999999999999995589999999 8 8877 8888887 5544
Q ss_pred CCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCCEEEEECCCccchHHHHhhcCCCccEEe
Q psy1120 688 QPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVS 767 (883)
Q Consensus 688 ~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~~~iEiGP~~~L~~~i~~~l~~~~~~~~ 767 (883)
.++++.++|+|++++...+........+++||++|+++||+|.++++.+.+.++|||||||++|+++++++++....+++
T Consensus 704 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~~~fvEiGP~~~L~~~~~~~l~~~~~~~~ 783 (2512)
T 2vz8_A 704 DPKPRSKRWLSTSIPEAQWQGSLARTFSAEYSVNNLVSPVLFQEALQHVPAHAVVVEIAPHALLQAVLKRSLESSCTIIP 783 (2512)
T ss_dssp SCCBCCTTEECSSSCGGGTTSSSTTBCCHHHHHHHHHSCEEHHHHHTTSCSSCEEEECSSSCTTHHHHHHHSCTTSEEEC
T ss_pred cCCCCCceEEEeecCCCcccCcccccCCHHHHHHHhhccccHHHHHHhhhcCCEEEEECCcHHHHHHHHHHhccCCcEEe
Confidence 44566788999998765443222344689999999999999999999999889999999999999999999977778889
Q ss_pred eccCCCcchHHHHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCCccccCCCCCCCCCcccccchhhhhhc--cCCCeEEEE
Q psy1120 768 LTQRENANSVLYLLQALGKLYESGVHPHLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYRMQEK--LKSGERTVV 845 (883)
Q Consensus 768 ~~~~~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~~~~~~~~~~~~~~lP~y~w~~~~~W~~~~~~~~~~--~~~~~~~~~ 845 (883)
+++|++.++.+++++++++||++|++|||..+|+...++..+.+++.||+|||||++||.+++...... .....++|.
T Consensus 784 ~l~r~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~lP~y~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 863 (2512)
T 2vz8_A 784 LMKKDHRDNLEFFLSNVGRLHLAGVSVNPNGLFPPVEFPAPRGTPLISPHIKWDHSQAWDVPSAADFPSGSSCSSVAVYK 863 (2512)
T ss_dssp SCCTTCSCHHHHHHHHHHHHHHHTCCCCGGGTSCCCCSSCCTTCCCSGGGCCCCCCSCCCCCCGGGSCCSCCCTTEEEEE
T ss_pred eccCCCCCHHHHHHHHHHHHHHCCCcCCHHHhCCccccCccCCCcCCCCCCCCCCcccccCcccccccCCCCCCceEEEE
Confidence 998876678999999999999999999999999876665555567779999999999999874322111 113467888
Q ss_pred EEecCCC-CCccCCCccCCeeEechHHHHHHHHhcc
Q psy1120 846 VSLKDDE-MEFVSGHMIDGRNLFPATGYLATVCNVS 880 (883)
Q Consensus 846 ~~l~~~~-~p~l~dH~v~g~~v~P~a~y~ema~ea~ 880 (883)
.+++.++ +|||+||+|+|++||||++|++||+||+
T Consensus 864 ~~~~~~~~~~wl~~H~v~g~~~~P~~~y~~~a~~a~ 899 (2512)
T 2vz8_A 864 FDVSPESPDHYLVDHCIDGRVLFPGTGYLWLTWKTL 899 (2512)
T ss_dssp EECSTTSGGGGGGGCEETTEEECCHHHHHHHHHHHH
T ss_pred EEcccccCCchhccCeECCEEeeCcHHHHHHHHHHH
Confidence 8888877 8999999999999999999999999985
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-141 Score=1298.19 Aligned_cols=761 Identities=30% Similarity=0.490 Sum_probs=660.1
Q ss_pred CCcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCC-Ccc-cccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcC
Q psy1120 32 GDEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDD-DRR-WKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTM 108 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~-~~~-~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~ 108 (883)
.++||||||||+||++ .++++||++|.+|++++++. .+| |..+ + .....|++.+++.||+.||+|+++|++.|
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~~---~-~~~~~~~l~~~~~fD~~~f~i~~~ea~~m 113 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEPD---P-DARLGGMLAAAGDFDAGFFGISPREALAM 113 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCCC---S-SCCEEBCCTTTTEECTGGGTCCHHHHHHS
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCCC---C-CcceeeEecCccccChhhcCCCHHHHHhc
Confidence 4689999999999986 78999999999999999975 455 6432 1 24556788889999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCcee
Q psy1120 109 DPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSY 188 (883)
Q Consensus 109 dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~ 188 (883)
||||||+++++|+||||||++++++++.++|||+|++.++|..........+.++..+++..++++++||+.|||+||++
T Consensus 114 dp~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~Gps~ 193 (917)
T 2hg4_A 114 DPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAM 193 (917)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCCSCEE
T ss_pred CHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCCCCeE
Confidence 99999999999999999999999999999999999998887654444455667788888899999999999999999999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
+|+++||||++||++||++|++|+||+|||||+|.+++|..+..|..+++++++++|+|||.++||+++|||+|++|||+
T Consensus 194 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEGagavVL~~ 273 (917)
T 2hg4_A 194 TVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQR 273 (917)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCEEEEEEEEE
T ss_pred eecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcceEEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh
Q psy1120 269 SKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV 344 (883)
Q Consensus 269 ~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~ 344 (883)
+++|+ +||++|+|+++|+||.+ .+++.|++.+|.++|+++|++||++|+||||||+|||||++||++|.++|.++
T Consensus 274 l~~A~~~g~~i~a~I~G~~~~~dg~~-~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~ 352 (917)
T 2hg4_A 274 LSAARREGRPVLAVLRGSAVNQDGAS-NGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLST 352 (917)
T ss_dssp HHHHHHTTCCCCEEEEEEEEEECCSC-SSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTT
T ss_pred HHHHHhCCCCeEEEEEEEEEecCCCc-cCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHH
Confidence 99885 59999999999999975 57899999999999999999999999999999999999999999999999999
Q ss_pred hCCCC--CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcCCCCeee-------------
Q psy1120 345 FCPGR--TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQL------------- 409 (883)
Q Consensus 345 f~~~~--~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~------------- 409 (883)
|+..+ ..+++|||+|+|+||+++|||++++||++++|+|++|||++||++|||+|+ +...++++
T Consensus 353 fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~-~~~~~~~v~~~~~~w~~~~~~ 431 (917)
T 2hg4_A 353 YGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIE-WDLGAVSVVSQARSWPAGERP 431 (917)
T ss_dssp TTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSC-C---CCEECCSCEECCCCSSC
T ss_pred hccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCC-ccccceeecCCcccCCCCCCC
Confidence 97533 468999999999999999999999999999999999999999999999997 44433322
Q ss_pred -------------------ecCCc---------------------hHHH----HHHHhhhh--------------cCCcc
Q psy1120 410 -------------------ESRPL---------------------DAEY----VRLFHEIH--------------SDDIA 431 (883)
Q Consensus 410 -------------------~~~~~---------------------~~~~----~~~~~~~~--------------~~~~~ 431 (883)
++.+. ...+ .++...+. ..++.
T Consensus 432 r~a~v~sfG~gG~Nah~vl~~~~~~~~~~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~l~~~~~~~l~d~~~tl~~~r~ 511 (917)
T 2hg4_A 432 RRAGVSSFGISGTNAHVIVEEAPEADEPEPAPDSGPVPLVLSGRDEQAMRAQAGRLADHLAREPRNSLRDTGFTLATRRS 511 (917)
T ss_dssp CEEEEEEECTTSEEEEEEEEECCCCC--------CCEEEEEEESSHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHSSC
T ss_pred CEEEEeeecCCCceEEEEeccCCcccCCCCccccCcceeeeccCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHhchh
Confidence 11110 0000 01111111 12456
Q ss_pred CCceeEEEEEcCCchhhhhhc------C-------CCCCCCCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHh
Q psy1120 432 GHMYRGYTILSANSDKKIRSS------T-------HYPGDTRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVL 497 (883)
Q Consensus 432 ~~~~r~~~~~~~~~~~~~~~~------~-------~~~~~~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l 497 (883)
++.+|.+++..+. +....+ . ......++++|||||||+||+|||++||+ +|+||+.+++|++++
T Consensus 512 ~~~~r~~~~~~~~--~l~~~l~~~~~~~~~~~~~~~~~~~~~~vafvF~GQGsQ~~gMg~~L~~~~p~fr~~~~~~~~~l 589 (917)
T 2hg4_A 512 AWEHRAVVVGDRD--EALAGLRAVADGRIADRTATGQARTRRGVAMVFPGQGAQWQGMARDLLRESQVFADSIRDCERAL 589 (917)
T ss_dssp CCSEEEEEEESHH--HHHHHHHHHHHTCCCTTEEEEECCCCCCEEEEECCTTSCCSSTTHHHHHHCHHHHHHHHHHHHHH
T ss_pred cccceEEEEeCCH--HHHHHHHHHhcccccccccccccccccceeEEeCCCccccccchHHHHhhCHHHHHHHHHHHHHH
Confidence 7889976665442 222111 0 01124568999999999999999999996 899999999999999
Q ss_pred ccC-CCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHH
Q psy1120 498 KPK-GVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYR 576 (883)
Q Consensus 498 ~~~-g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~R 576 (883)
++. +|+|.+.++..++ ++++.++||+||++|+||+++|++|||+|++|+|||+|||+|+|+||+||+|||+++++.|
T Consensus 590 ~~~~~~~l~~~l~~~~~--l~~~~~~Qpalfa~q~al~~ll~~~Gi~P~~viGHS~GE~aAa~~AG~lsleda~~lv~~R 667 (917)
T 2hg4_A 590 APHVDWSLTDLLSGARP--LDRVDVVQPALFAVMVSLAALWRSHGVEPAAVVGHSQGEIAAAHVAGALTLEDAAKLVAVR 667 (917)
T ss_dssp GGGCSSCHHHHHHTTCC--CCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEECTTHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred hhccCCCHHHHhcCCcc--ccchhhHHHHHHHHHHHHHHHHHHcCCceeEEEecChhHHHHHHHcCCCCHHHHHHHHHHH
Confidence 875 9999999986543 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccEEEEcCCHHHHhhcCC---CCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccc
Q psy1120 577 GLASVETEFIRGAMAAVGLGYKDLRSRCP---PEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKH 653 (883)
Q Consensus 577 g~~~~~~~~~~G~M~av~~~~~~v~~~l~---~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afH 653 (883)
|++|++. ...|+|++|+++.+++++++. +.|+|||+|||+++||||+.++|+++.+.|+++|+++++|+| ++|||
T Consensus 668 g~lm~~~-~~~G~M~av~~~~~~v~~~l~~~~~~v~iA~~Nsp~~~viSG~~~ai~~l~~~l~~~gi~~~~L~v-~~AfH 745 (917)
T 2hg4_A 668 SRVLRRL-GGQGGMASFGLGTEQAAERIGRFAGALSIASVNGPRSVVVAGESGPLDELIAECEAEAHKARRIPV-DYASH 745 (917)
T ss_dssp HHHGGGG-TTSCEEEEESSCHHHHHHHHGGGTTSEEEEEEEETTEEEEEECTTHHHHHHHHHHHHTCCEEEESC-SCCCS
T ss_pred HHHHHhc-CCCceEEEEeCCHHHHHHHHhhcCCceEEEEEcCCCceEEecCHHHHHHHHHHHHhcCceeEEecC-Ccccc
Confidence 9999874 467999999999999999885 369999999999999999999999999999999999999999 99999
Q ss_pred cchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHH
Q psy1120 654 APLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETS 733 (883)
Q Consensus 654 s~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai 733 (883)
|++| + ++.+ +|.+.+. .+. ++.|++|++|++++.... ....+++||++|+++||+|.+++
T Consensus 746 S~~m---~--~~~~----~~~~~l~-----~i~--~~~p~ip~~S~vtg~~~~----~~~~~~~yw~~~l~~pV~F~~av 805 (917)
T 2hg4_A 746 SPQV---E--SLRE----ELLTELA-----GIS--PVSADVALYSTTTGQPID----TATMDTAYWYANLREQVRFQDAT 805 (917)
T ss_dssp SGGG---G--GGHH----HHHHHST-----TCC--CCCCSSEECCTTTSSCCC----GGGCSHHHHHHHHHSCCCHHHHH
T ss_pred Ccch---H--HHHH----HHHHHHh-----cCC--CCCCcceEEecCCCcccC----cccCCHHHHHHHhhCcccHHHHH
Confidence 9999 7 7666 8887776 443 468899999999997642 22358999999999999999999
Q ss_pred HHhhcC--CEEEEECCCccchHHHHhhcCC------CccEEeeccCCCcchHHHHHHHHHHHHHcCCCCCCCCcCCCCCC
Q psy1120 734 RHIQKN--AITLEIAPHGLLQAILRRSLPK------TVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLYPKIDF 805 (883)
Q Consensus 734 ~~l~~~--~~~iEiGP~~~L~~~i~~~l~~------~~~~~~~~~~~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~~~~~ 805 (883)
+.+.+. .+|||||||++|++++++++.. ...++++++|+. ++..+|++++++||++|++|||..+++.
T Consensus 806 ~~l~~~g~~~fvEiGP~~~L~~~~~~~l~~~~~~~~~~~~~~sl~r~~-~~~~~ll~~l~~L~~~G~~vdw~~~~~~--- 881 (917)
T 2hg4_A 806 RQLAEAGFDAFVEVSPHPVLTVGIEATLDSALPADAGACVVGTLRRDR-GGLADFHTALGEAYAQGVEVDWSPAFAD--- 881 (917)
T ss_dssp HHHHHTTCCEEEECSSSCSSHHHHHHHHHHHSCTTSCCEEECCCBTTB-CSHHHHHHHHHHHHTTTCCCCCGGGCSS---
T ss_pred HHHHhCCCCEEEEeCCChHHHHHHHHHHhhcccccCCceEEeecCCCC-CHHHHHHHHHHHHHHCCCCCChHHhCCC---
Confidence 999886 4799999999999999999742 356788888864 7899999999999999999999999861
Q ss_pred CCCCCccccCCCCCCCCCcccccchhh
Q psy1120 806 PVSRGTPMISPLVRWEHSEDWYVTTYR 832 (883)
Q Consensus 806 ~~~~~~~~~lP~y~w~~~~~W~~~~~~ 832 (883)
.++++||+|||+|++||.+++..
T Consensus 882 ----~~~~~LP~y~f~~~~~w~~~~~~ 904 (917)
T 2hg4_A 882 ----ARPVELPVYPFQRQRYWLPIPTG 904 (917)
T ss_dssp ----CCCCCCCCCCCCCEECCCCC---
T ss_pred ----CCccCCCCCCCCCCccCCCCCcc
Confidence 24577999999999999987643
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-140 Score=1292.39 Aligned_cols=768 Identities=30% Similarity=0.500 Sum_probs=662.4
Q ss_pred CCCcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCC-Ccc-cccCCCCCC--------CCCCccccccCCCCCcccCC
Q psy1120 31 PGDEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDD-DRR-WKLGKEHPE--------IPQRTGKLYEVNKFDAAFFG 99 (883)
Q Consensus 31 ~~~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~-~~~-~~~~~~~~~--------~~~~~g~~~~~~~fD~~~f~ 99 (883)
..++||||||||+||+| .++++||++|.+|++++++. .+| |+...++.. .....|++.+++.||+.|||
T Consensus 4 ~~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~ 83 (915)
T 2qo3_A 4 ESDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFG 83 (915)
T ss_dssp CCCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHT
T ss_pred CCCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcC
Confidence 34789999999999998 89999999999999999874 455 764321111 12346788889999999999
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHH
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
|+++|++.||||+||+++++++||||||++++++++.++|||+|++.++|.... .....++++..+++..++++++|++
T Consensus 84 i~~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~a~ris~ 162 (915)
T 2qo3_A 84 VSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDT-AAAEDVEGYSVTGVAPAVASGRISY 162 (915)
T ss_dssp CCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTC-C---CTTCHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhh-cccccccccccccccccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988876433 3344567788889999999999999
Q ss_pred hhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCccccc
Q psy1120 180 WLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSE 259 (883)
Q Consensus 180 ~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gE 259 (883)
.|||+||+++|+++||||++||++||++|++|+||+|||||+|.+++|..+..|..+++++++++|+|||.++||+++||
T Consensus 163 ~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gE 242 (915)
T 2qo3_A 163 TMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSE 242 (915)
T ss_dssp HHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBC
T ss_pred HhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcH
Q psy1120 260 AVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDP 335 (883)
Q Consensus 260 Ga~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~ 335 (883)
|+|++|||++++|+ +||++|+|+++|+||.+ .+++.|++.+|.++|+++|++||++|+||||||+|||||++||+
T Consensus 243 GagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~-~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~ 321 (915)
T 2qo3_A 243 GVTLVLLERLSEARRNGHEVLAVVRGSALNQDGAS-NGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDP 321 (915)
T ss_dssp EEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC-SSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHH
T ss_pred ceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCc-cCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCH
Confidence 99999999999885 59999999999999964 57899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCC--CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcCCCCeee----
Q psy1120 336 EEVQALENVFCPGR--TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQL---- 409 (883)
Q Consensus 336 ~E~~Ai~~~f~~~~--~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~---- 409 (883)
+|..+|.++|+..+ ..+++|||+|+|+||+++|||++++||++++|+++.|||++||++|||+|+ +.++++++
T Consensus 322 ~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~-~~~~~~~~~~~~ 400 (915)
T 2qo3_A 322 IEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVD-WSSGGVALLAGN 400 (915)
T ss_dssp HHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSC-CSSSSEEECSSC
T ss_pred HHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccc-cccCceeeecCC
Confidence 99999999997533 468999999999999999999999999999999999999999999999998 44444333
Q ss_pred ----------------------------ecCCc----------------------hHHH----HHHHhhhh---------
Q psy1120 410 ----------------------------ESRPL----------------------DAEY----VRLFHEIH--------- 426 (883)
Q Consensus 410 ----------------------------~~~~~----------------------~~~~----~~~~~~~~--------- 426 (883)
++.+. ...+ .++...+.
T Consensus 401 ~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~~~~~~~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~l~~~~~~l~d~ 480 (915)
T 2qo3_A 401 QPWRRGERTRRAAVSAFGISGTNAHVIVEEAPEREHRETTAHDGRPVPLVVSARSTAALRAQAAQIAELLERPDADLAGV 480 (915)
T ss_dssp EECCSSSSCCEEEEEEECTTSEEEEEEEEECCC--------CCSSCEEEEEEESSHHHHHHHHHHHHHHTTSSSCCHHHH
T ss_pred cccccCCCCcEEEEeeecCCCceEEEEEeeccccccccccccCCcccceeEecCCHHHHHHHHHHHHHHhcCCccchhHH
Confidence 11110 0000 11111111
Q ss_pred ----cCCccCCceeEEEEEcCCchhhh---hhc---CCC--------CCC-CCCEEEEeCCCCchhhHhhHHHhc-ChHH
Q psy1120 427 ----SDDIAGHMYRGYTILSANSDKKI---RSS---THY--------PGD-TRPLWFVFSGMGSQWDGMGTELME-IPIF 486 (883)
Q Consensus 427 ----~~~~~~~~~r~~~~~~~~~~~~~---~~~---~~~--------~~~-~~~v~fvF~GQGsq~~gMg~~L~~-~p~f 486 (883)
...+.++.+|.++++.+ .++.. ..+ ... ... .++++|||||||+||+|||++||+ +|+|
T Consensus 481 ~~tl~~~r~~~~~r~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~vafvF~GQGsQ~~gMg~~L~~~~p~f 559 (915)
T 2qo3_A 481 GLGLATTRARHEHRAAVVAST-REEAVRGLREIAAGAATADAVVEGVTEVDGRNVVFLFPGQGSQWAGMGAELLSSSPVF 559 (915)
T ss_dssp HHHHHHSSCCCSEEEEEEESS-HHHHHHHHHHHHHTCCCCTTEEEEECSCSCCCEEEEECCTTCCCTTTTHHHHHSCHHH
T ss_pred HHHHhhcccccCceEEEEECC-HHHHHHHHHHHhcCCCCccceeeccccCCCCceeeecCCCcccccchhHHHHhhCHHH
Confidence 12456788997666554 23222 111 000 112 238999999999999999999997 8999
Q ss_pred HHHHHHHHHHhccC-CCChHHHhccCCC-ccchhhhhHHHHHHHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccC
Q psy1120 487 AATIEKLQAVLKPK-GVDVKRIITDTNP-KMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCF 564 (883)
Q Consensus 487 r~~~~~~~~~l~~~-g~~l~~~l~~~~~-~~l~~~~~~qp~i~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~l 564 (883)
|+.+++|+++++++ +|+|.++++..++ ..++++.++||+||++|+||+++|++|||+|++|+|||+|||+|+|+||+|
T Consensus 560 r~~~~~~~~~l~~~~~~sl~~~l~~~~~~~~l~~~~~~Qpalfa~q~al~~ll~~~Gi~P~~v~GHS~GE~aAa~~AG~l 639 (915)
T 2qo3_A 560 AGKIRACDESMAPMQDWKVSDVLRQAPGAPGLDRVDVVQPVLFAVMVSLAELWRSYGVEPAAVVGHSQGEIAAAHVAGAL 639 (915)
T ss_dssp HHHHHHHHHHTGGGCSSCHHHHHHTCTTCCCTTSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEECTTHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHhhhcCCCHHHHHhCCCccccccchhHHHHHHHHHHHHHHHHHHHcCCceeEEEEcCccHHHHHHHcCCC
Confidence 99999999999886 9999999986543 458999999999999999999999999999999999999999999999999
Q ss_pred ChHhhHHHHHHHHHhhcccccccccEEEEcCCHHHHhhcCC---CCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCe
Q psy1120 565 TVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCP---PEIEVACHNSPDSSTISGPEENVKKFVAELQADNIF 641 (883)
Q Consensus 565 sleda~~lv~~Rg~~~~~~~~~~G~M~av~~~~~~v~~~l~---~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~ 641 (883)
|+||++++++.||++|++. ...|+|++|+++.+++++++. ++|+|||+|+|+++||||+.++|+++.+.|+++|++
T Consensus 640 sleda~~lv~~Rg~lm~~~-~~~G~M~aV~~~~~~~~~~l~~~~~~v~iA~~Nsp~~~viSG~~~ai~~l~~~l~~~gi~ 718 (915)
T 2qo3_A 640 TLEDAAKLVVGRSRLMRSL-SGEGGMAAVALGEAAVRERLRPWQDRLSVAAVNGPRSVVVSGEPGALRAFSEDCAAEGIR 718 (915)
T ss_dssp CHHHHHHHHHHHHHHHHTT-TTSCEEEEESSCHHHHHHTTGGGTTCCCCCEEEETTEEEEEECHHHHHHHHHHHTTTTCC
T ss_pred CHHHHHHHHHHHHHHHHhc-CCCceEEEEeCCHHHHHHHHHhcCCcEEEEEEcCCcceEeecCHHHHHHHHHHHHhCCee
Confidence 9999999999999999874 457999999999999999986 469999999999999999999999999999999999
Q ss_pred eEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEecccCCccccccccccCCHHHHHH
Q psy1120 642 ARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTN 721 (883)
Q Consensus 642 ~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~ 721 (883)
+++|+| ++||||++| + ++.+ +|++.+. .+. +++|++|++|++++.... ....+++||++
T Consensus 719 ~~~L~v-~~AfHS~~m---~--~~~~----~~~~~l~-----~i~--~~~p~ip~~S~vtg~~~~----~~~~~~~yw~~ 777 (915)
T 2qo3_A 719 VRDIDV-DYASHSPQI---E--RVRE----ELLETTG-----DIA--PRPARVTFHSTVESRSMD----GTELDARYWYR 777 (915)
T ss_dssp BCCCSC-SSCTTSGGG---T--TTHH----HHHHHHT-----TCC--CCCCSSEEECTTTCSEEC----GGGCCHHHHHH
T ss_pred EEEecC-CcceechHH---H--HHHH----HHHHHHh-----ccC--CCCCCCeEEeCCCCcccC----cccCCHHHHHH
Confidence 999999 999999999 7 8777 8888887 444 467899999999997642 23358999999
Q ss_pred HhcCCccHHHHHHHhhcC--CEEEEECCCccchHHHHhhcCC-----CccEEeeccCCCcchHHHHHHHHHHHHHcCCCC
Q psy1120 722 NLLSPVLFEETSRHIQKN--AITLEIAPHGLLQAILRRSLPK-----TVTNVSLTQRENANSVLYLLQALGKLYESGVHP 794 (883)
Q Consensus 722 ~l~~pV~f~~ai~~l~~~--~~~iEiGP~~~L~~~i~~~l~~-----~~~~~~~~~~~~~~~~~~ll~~l~~L~~~G~~v 794 (883)
|+++||+|.++++.+.+. .+|||||||++|++++++++.. ...+++++.|+. ++..++++++++||++|++|
T Consensus 778 ~l~~pV~F~~av~~l~~~g~~~fvEiGP~~~L~~~~~~~l~~~~~~~~~~~~~sl~r~~-~~~~~ll~~l~~L~~~G~~v 856 (915)
T 2qo3_A 778 NLRETVRFADAVTRLAESGYDAFIEVSPHPVVVQAVEEAVEEADGAEDAVVVGSLHRDG-GDLSAFLRSMATAHVSGVDI 856 (915)
T ss_dssp HHHSCEEHHHHHHHHHHTTCCEEEECSSSCSSHHHHHHHHHTSTTCSSCEEECSCBTTB-CHHHHHHHHHHHHHTTTCCC
T ss_pred HhhCcCCHHHHHHHHHhCCCCEEEEeCCChhhhhhHHHhhhhccCCCCceEEecCCCCC-CHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999886 4799999999999999999853 356788888764 78999999999999999999
Q ss_pred CCCCcCCCCCCCCCCCccccCCCCCCCCCcccccchhh
Q psy1120 795 HLANLYPKIDFPVSRGTPMISPLVRWEHSEDWYVTTYR 832 (883)
Q Consensus 795 d~~~~~~~~~~~~~~~~~~~lP~y~w~~~~~W~~~~~~ 832 (883)
||+.+++. .++++||+|||+|++||.+++.+
T Consensus 857 d~~~~~~~-------~~~~~LP~Y~f~~~~~w~~~~~~ 887 (915)
T 2qo3_A 857 RWDVALPG-------AAPFALPTYPFQRKRYWLQPAAP 887 (915)
T ss_dssp CGGGGSTT-------CCCCCCCCCCCCCEECCCC----
T ss_pred CHHHhCCC-------CCccCCCCCCCCCCcccCCCCcc
Confidence 99999873 23567999999999999987644
|
| >3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-70 Score=628.06 Aligned_cols=368 Identities=24% Similarity=0.329 Sum_probs=309.4
Q ss_pred CccCCceeEEEEEcCCchhhhhhc---C---C-------CCCCCCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHH
Q psy1120 429 DIAGHMYRGYTILSANSDKKIRSS---T---H-------YPGDTRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQ 494 (883)
Q Consensus 429 ~~~~~~~r~~~~~~~~~~~~~~~~---~---~-------~~~~~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~ 494 (883)
+++++.+|.+++..+ .++....+ . . .....++++|||||||+||+|||++||+ +|+||+.+++|+
T Consensus 96 ~R~~~~~R~~vva~~-~~el~~~L~a~a~g~~~~~~~~~~~~~~~~~vfvF~GQGsQ~~gMG~~L~~~~p~fr~~~~~~~ 174 (491)
T 3tzy_A 96 RRNHGRSRAVVLAHD-HDEAIKGLRAVAAGKQAPNVFSVDGPVTTGPVWVLAGFGAQHRKMGKSLYLRNEVFAAWIEKVD 174 (491)
T ss_dssp HSCCCSEEEEEEESS-HHHHHHHHHHHHTTCCCTTEEEESSCCSSCCEEEECCTTTCCTTTTHHHHHHCHHHHHHHHHHH
T ss_pred cccCCCceEEEEECC-HHHHHHhhhhhhcCCCCCCceeccCCCCCCEEEEECCCCcchhhhHHHHhhcCHHHHHHHHHHH
Confidence 467889997666544 33332211 1 1 1224567999999999999999999996 999999999999
Q ss_pred HHhccC-CCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHH
Q psy1120 495 AVLKPK-GVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAA 573 (883)
Q Consensus 495 ~~l~~~-g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv 573 (883)
+++++. +|++.++++.+.+ ..++.++||+||++||||+++|++|||+|++|+|||+|||+|+|+||+||++||++++
T Consensus 175 ~~l~~~~~~sl~~~l~~~~~--~~~~~~~Qpalfa~q~Al~~ll~~~Gv~P~av~GHS~GE~aAa~~AG~lsleda~~lv 252 (491)
T 3tzy_A 175 ALVQDELGYSVLELILDDAQ--DYGIETTQVTIFAIQIALGELLRHHGAKPAAVIGQSLGEAASAYFAGGLSLRDATRAI 252 (491)
T ss_dssp HHHHHHHSSCHHHHHHCTTC--CCCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEECGGGHHHHHHHTTSSCHHHHHHHH
T ss_pred HHhhhhhchhHHHHhcCCch--hhhhHHHHHHHHHHHHHHHHHHHHcCCCcceEeecCHhHHHHHHHcCCchhhhhhhhh
Confidence 999875 9999999987543 4678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccc-ccc----ccEEEEcCCHHHHhhcCC--CCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcC
Q psy1120 574 YYRGLASVETE-FIR----GAMAAVGLGYKDLRSRCP--PEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTIN 646 (883)
Q Consensus 574 ~~Rg~~~~~~~-~~~----G~M~av~~~~~~v~~~l~--~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~ 646 (883)
+.||++|++.. ... +.|++++.+.+++.+++. .+|+|||+|||+|+||||+.++|+++.+.|+++|+++++|+
T Consensus 253 ~~Rg~lm~~~~~~~~g~m~~~ma~v~~~~~~v~~~~~~~~~v~iA~~NsP~~~ViSG~~~ai~~~~~~l~~~g~~~~~L~ 332 (491)
T 3tzy_A 253 CSRSHLMGEGEAMLFGEYIRLMALVEYSADEIREVFSDFPDLEVCVYAAPTQTVIGGPPEQVDAILARAEAEGKFARKFA 332 (491)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEESCCHHHHHHHGGGCTTCEEEEEEETTEEEEEECHHHHHHHHHHHHHHTCCEEEES
T ss_pred hhhhhhhhhccccCCCcchhhhhhccchHHHHHhhhcccccceeeeecCCCcEEeCCcHHHHHHHHHHHHhcCceEEecc
Confidence 99999998642 222 446777999999999886 47999999999999999999999999999999999999999
Q ss_pred CCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCC
Q psy1120 647 VANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSP 726 (883)
Q Consensus 647 v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~p 726 (883)
| ++||||++| + ++.+ +|++.+. .+. ++.|++|++|++++............+++||++|+|+|
T Consensus 333 V-~~AfHS~~m---~--~~~~----~~~~~l~-----~i~--~~~p~ip~~S~vt~~~~~~~~~~~~~~~~yw~~~l~~p 395 (491)
T 3tzy_A 333 T-KGASHTSQM---D--PLLG----ELTAELQ-----GIK--PTSPTCGIFSTVHEGRYIKPGGEPIHDVEYWKKGLRHS 395 (491)
T ss_dssp C-SSCTTSGGG---G--GGHH----HHHHHTT-----TCC--CCCCSSEEEETTTTTEEECTTCCCCCSHHHHHHHHHSC
T ss_pred c-ccCCcchhh---h--hhHH----HHHHHHh-----cCC--CCCCCccEEEeccCCcccCCCcchhcCHHHHHHHhhcc
Confidence 9 999999999 7 7766 8888877 444 47899999999987654332234456899999999999
Q ss_pred ccHHHHHHHhhcC--CEEEEECCCccchHHHHhhcC----CCccEEeeccCCCcchHHHHHHHHHHHHHcCCCCCCCCcC
Q psy1120 727 VLFEETSRHIQKN--AITLEIAPHGLLQAILRRSLP----KTVTNVSLTQRENANSVLYLLQALGKLYESGVHPHLANLY 800 (883)
Q Consensus 727 V~f~~ai~~l~~~--~~~iEiGP~~~L~~~i~~~l~----~~~~~~~~~~~~~~~~~~~ll~~l~~L~~~G~~vd~~~~~ 800 (883)
|+|.++|+.|.++ .+|||||||++|++++++++. ....++++++|+. ++..+|++++++||++|++|||+.+|
T Consensus 396 V~F~~av~~l~~~g~~~fvEiGP~~vL~~~i~~~l~~~~~~~~~~~~~l~r~~-~~~~~ll~al~~L~~~G~~vdw~~~~ 474 (491)
T 3tzy_A 396 VYFTHGIRNAVDSGHTTFLELAPNPVALMQVALTTADAGLHDAQLIPTLARKQ-DEVSSMVSTMAQLYVYGHDLDIRTLF 474 (491)
T ss_dssp BCHHHHHHHHHHTTCCEEEECSSSCHHHHHHHHHHHHTTCTTCEEECCCCTTS-CHHHHHHHHHHHHHHTTCSCCGGGGS
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHhhhcCCCCceEEecCCCCC-CHHHHHHHHHHHHHHCCCCCChHHHC
Confidence 9999999999887 479999999999999999874 2456788888874 78999999999999999999999999
Q ss_pred CCCCCCCCCCccccCCCCCC
Q psy1120 801 PKIDFPVSRGTPMISPLVRW 820 (883)
Q Consensus 801 ~~~~~~~~~~~~~~lP~y~w 820 (883)
+....+ .+.++||+|||
T Consensus 475 ~~~~~~---~~~~~LP~Y~f 491 (491)
T 3tzy_A 475 SRASGP---QDYANIPPTRF 491 (491)
T ss_dssp CCCSSG---GGSCCCCC---
T ss_pred CCCCCC---CCcCCCCCCCC
Confidence 765432 23567999998
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-65 Score=582.33 Aligned_cols=353 Identities=22% Similarity=0.280 Sum_probs=318.6
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
.++||||||||++|+|.+.++||++|++|++++++.+. |+.. +..+.+. ...++.||+.+| |++++++.|||+
T Consensus 5 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~-~~~~---~~~~~~~--~~~v~~fd~~~~-i~~~~~~~~d~~ 77 (412)
T 4ewg_A 5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPD-WDYF---ESLHTRL--AAPLPGFAQPAD-WPRKKTRSMGRV 77 (412)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGG-GGGS---SSCCCCE--EBCCSCCCCCTT-SCHHHHTTCCHH
T ss_pred CCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCc-cccc---cCCccce--eeecCCCChhhh-CCHHHHhhCCHH
Confidence 36899999999999999999999999999999998653 4332 0112221 124678999999 999999999999
Q ss_pred HHHHHHHHHHHHHHCCC-CCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHhhCC
Q psy1120 112 CRIILEKTYEAVIDAGI-NPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYWLGV 183 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~-~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~~~l 183 (883)
++|+++++++||+|||+ ++++++..++|||+|++.+++.... ......++++.+++...++++++|++.||+
T Consensus 78 ~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (412)
T 4ewg_A 78 SMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDL 157 (412)
T ss_dssp HHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCC
Confidence 99999999999999999 7788889999999999887654322 123345677778888899999999999999
Q ss_pred CCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC-----CCCCCCcccCCCCcccc
Q psy1120 184 NGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP-----DGRCKSFDEAANGYCRS 258 (883)
Q Consensus 184 ~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~~~G~~~g 258 (883)
+||+++|+++|+||++||++|+++|++|+||+|||||+|. +++.....|.+++.+++ ++.|+|||.+++|+++|
T Consensus 158 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~g 236 (412)
T 4ewg_A 158 KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVG 236 (412)
T ss_dssp CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBB
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceE
Confidence 9999999999999999999999999999999999999999 88988999999999986 78999999999999999
Q ss_pred cceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCc
Q psy1120 259 EAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGD 334 (883)
Q Consensus 259 EGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD 334 (883)
||++++||+++++|+ +||++|+|++.++||++ ++.|++.+|.++|+++|++||++|+||||||+|||||+.||
T Consensus 237 eGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~---~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D 313 (412)
T 4ewg_A 237 EGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAH---MTQPTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGD 313 (412)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSC---SSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHH
T ss_pred CeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCcccc
Confidence 999999999999886 59999999999999964 88899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCC
Q psy1120 335 PEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDI 399 (883)
Q Consensus 335 ~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~ 399 (883)
++|..+|.++|+. .++|+|+|+|+||++||||+++++|++++|++++|||++||++|||.+
T Consensus 314 ~~E~~al~~~~~~----~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~ 374 (412)
T 4ewg_A 314 VAESQATARTFGE----RMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPAC 374 (412)
T ss_dssp HHHHHHHHHHHCT----TCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTS
T ss_pred HHHHHHHHHHcCC----CCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcc
Confidence 9999999999964 389999999999999999999999999999999999999999999998
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-66 Score=587.73 Aligned_cols=363 Identities=22% Similarity=0.341 Sum_probs=322.2
Q ss_pred CCCCCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhc
Q psy1120 28 RPAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHT 107 (883)
Q Consensus 28 ~~~~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~ 107 (883)
++.+.++||||||||++|+|.++++||++|++|++++++.+ +|+...+ .....| .+..||+.+| |++++++.
T Consensus 13 ~~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~~---~~~~~~---~v~~fd~~~~-i~~~~~~~ 84 (427)
T 3ho9_A 13 ACVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID-HFDTSAY---ATKFAG---LVKDFNCEDI-ISRKEQRK 84 (427)
T ss_dssp ----CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC-SSCCTTC---SCCEEE---CCSSCCCTTT-SCHHHHTT
T ss_pred CCCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCC-ccccccC---ccceee---EcCCCChhhc-CCHHHHhh
Confidence 34556899999999999999999999999999999999864 4544321 112223 3567999999 99999999
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhh-------hhhhhhccCCccccccchhhHHHHHHHh
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT-------WFYEKLQINGFGITGCSRAMLANRVSYW 180 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~is~~ 180 (883)
|||++||+++++++||+|||++++++++.++|||+|++.+++... .......+.++.+++...++++++|++.
T Consensus 85 ~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 164 (427)
T 3ho9_A 85 MDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIM 164 (427)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHH
Confidence 999999999999999999999999999999999999987764332 1223445678888899999999999999
Q ss_pred hCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----CCCCCCCcccCCCCc
Q psy1120 181 LGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGY 255 (883)
Q Consensus 181 ~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~~~G~ 255 (883)
||++||+++|+++||||++||++|+++|++|+||+|||||+|.+++|..+..|..+++++ +++.|+|||.+++|+
T Consensus 165 lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 244 (427)
T 3ho9_A 165 YGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGF 244 (427)
T ss_dssp HTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSB
T ss_pred hCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999998 446899999999999
Q ss_pred ccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCC
Q psy1120 256 CRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTK 331 (883)
Q Consensus 256 ~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~ 331 (883)
++|||++++||+++++|+ +||++|+|++.++|+.+ .....|++.++.++++++|+++|++|+||||||+|||||+
T Consensus 245 v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~-~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~ 323 (427)
T 3ho9_A 245 VLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH-MTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTP 323 (427)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSB-TTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCH
T ss_pred eeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCC-cCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCC
Confidence 999999999999999886 59999999999999964 2223348899999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 332 VGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 332 ~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
.+|++|..++.++|+. ...+++++++|+++||+++|||+++++|++++|++++|||++||++|||.++
T Consensus 324 ~~d~~e~~a~~~~~g~-~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~ 391 (427)
T 3ho9_A 324 AGDKAEAQAVKTIFGE-AASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCD 391 (427)
T ss_dssp HHHHHHHHHHHHHHGG-GGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCC
T ss_pred CcCHHHHHHHHHHhcc-cCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 9999999999999974 2457999999999999999999999999999999999999999999999997
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-65 Score=587.59 Aligned_cols=361 Identities=23% Similarity=0.320 Sum_probs=322.2
Q ss_pred CCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCcccccc---CCCCCcccCCCChhhhhc
Q psy1120 31 PGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYE---VNKFDAAFFGVHFKQAHT 107 (883)
Q Consensus 31 ~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~fD~~~f~i~~~~~~~ 107 (883)
..++||||||||++|+|.++++||++|.+|++++++.++ |+... + .....|.+.+ ++.||+.|| +++++++.
T Consensus 19 ~~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~-~~~~~-~--~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~ 93 (438)
T 2iwz_A 19 LHRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVG-EEYKS-I--PCSVAAYVPRGSDEGQFNEQNF-VSKSDIKS 93 (438)
T ss_dssp EECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCS-GGGTT-S--SCCEEECCCBSSSTTSBCGGGT-SCHHHHTT
T ss_pred CCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCc-hhccc-C--ccceeeeeccccccccCChhhc-CCHHHHHh
Confidence 346899999999999999999999999999999988653 44321 1 1223455554 567999999 99999999
Q ss_pred CChHHHHHHHHHHHHHHHCCCCC-CCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHH
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINP-KSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~-~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
|||+++|+++++++||+|||+++ +++++.++|||+|++.+++.... ......++++.+++...++++++|++
T Consensus 94 ~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~ 173 (438)
T 2iwz_A 94 MSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSI 173 (438)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHH
Confidence 99999999999999999999988 77877899999999888764321 12234567778888888999999999
Q ss_pred hhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC----CCCCCCcccCCCCc
Q psy1120 180 WLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP----DGRCKSFDEAANGY 255 (883)
Q Consensus 180 ~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~----~g~~~pfd~~~~G~ 255 (883)
.|||+||+++|+++|+||++||++|+++|++|+||+|||||+|.+++|..+..|..++++++ ++.|+|||.+++|+
T Consensus 174 ~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~ 253 (438)
T 2iwz_A 174 RYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRDGF 253 (438)
T ss_dssp HHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCTTCTTCCSB
T ss_pred HhCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccccCCCCCCCE
Confidence 99999999999999999999999999999999999999999999889999999999999987 89999999999999
Q ss_pred ccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEEecCC
Q psy1120 256 CRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEVDPKNLAWIEAHGTG 329 (883)
Q Consensus 256 ~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl~~~dI~~ve~hgtg 329 (883)
++|||++++||+++++|+ +||++|+|++.++|+.+ ++.| ++.+|.++|+++|+++|++|+||||||+||||
T Consensus 254 ~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~---~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~Hgtg 330 (438)
T 2iwz_A 254 VMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGH---ITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATS 330 (438)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCS
T ss_pred EeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCC---CCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCC
Confidence 999999999999999875 58999999999999964 5556 77899999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 330 TKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 330 t~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|++||++|.++|.++|+.. ..+++|+|+|+++||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 331 T~~gD~~E~~al~~~fg~~-~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~ 400 (438)
T 2iwz_A 331 TPLGDAAENKAIKHLFKDH-AYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFD 400 (438)
T ss_dssp CHHHHHHHHHHHHHHHGGG-GGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCC
T ss_pred CcccCHHHHHHHHHHHhcc-CCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 9999999999999999642 346899999999999999999999999999999999999999999999997
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-65 Score=582.39 Aligned_cols=355 Identities=25% Similarity=0.394 Sum_probs=318.8
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCC-CccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQ-RTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
++|+||||||++|++.+.++||++|.+|++++++.+ +|+... .+. ..| .+++||+.+ ++++++++.|||+
T Consensus 7 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~----~~~~~~~---~i~~fd~~~-~~~~~~~~~~d~~ 77 (416)
T 1e5m_A 7 KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPIT-RFDASD----QACRFGG---EVKDFDATQ-FLDRKEAKRMDRF 77 (416)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC-SSCCTT----SSCCEEE---CCCSCCGGG-TSCHHHHHTSCHH
T ss_pred CCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCC-cccccc----CccceeE---EeCCCCccc-cCCHHHHHhcCHH
Confidence 689999999999999999999999999999998764 455431 122 223 355799987 4999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhh-------hhhhhhccCCccccccchhhHHHHHHHhhCCC
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT-------WFYEKLQINGFGITGCSRAMLANRVSYWLGVN 184 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~ 184 (883)
++|+++++++||+|||++++++++.++|||+|++.+++... ........+++.+++...++++++|++.||++
T Consensus 78 ~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 157 (416)
T 1e5m_A 78 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK 157 (416)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999988774321 12233456778888888899999999999999
Q ss_pred CceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----CCCCCCCcccCCCCccccc
Q psy1120 185 GPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRSE 259 (883)
Q Consensus 185 Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~~~G~~~gE 259 (883)
||+++|+++|+||++||++|+++|++|+||+|||||+|.++++..+..|..+++++ |++.|+|||.+++|+++||
T Consensus 158 gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ge 237 (416)
T 1e5m_A 158 GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGE 237 (416)
T ss_dssp SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBC
T ss_pred CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeee
Confidence 99999999999999999999999999999999999999988999999999999998 5789999999999999999
Q ss_pred ceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCC
Q psy1120 260 AVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333 (883)
Q Consensus 260 Ga~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~g 333 (883)
|++++||+++++|+ +||++|+|++.++|+.+ ++.| ++.+|.++|+++|+++|++|+||||||+|||||++|
T Consensus 238 GaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~---~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~ 314 (416)
T 1e5m_A 238 GSGILILEELESALARGAKIYGEMVGYAMTCDAYH---ITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPAN 314 (416)
T ss_dssp EEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH
T ss_pred eEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCC---CCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCc
Confidence 99999999999875 59999999999999964 4445 678999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 334 D~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|++|.++|.++|+.. ..+++|+|+|+++||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 315 D~~E~~al~~~~g~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~ 380 (416)
T 1e5m_A 315 DVTETRAIKQALGNH-AYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECD 380 (416)
T ss_dssp HHHHHHHHHHHHGGG-GGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCC
T ss_pred CHHHHHHHHHHHccc-CCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 999999999999642 346899999999999999999999999999999999999999999999987
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-66 Score=589.19 Aligned_cols=355 Identities=21% Similarity=0.355 Sum_probs=314.9
Q ss_pred CCCCCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCC-ccccccCCCCCcccCCCChhhhh
Q psy1120 28 RPAPGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQR-TGKLYEVNKFDAAFFGVHFKQAH 106 (883)
Q Consensus 28 ~~~~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~fD~~~f~i~~~~~~ 106 (883)
.++..++|+||||||++|+|.++++||++|++|++++++.+. |+... .+.+ .|. ..||+.+| |++++++
T Consensus 18 ~~~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~-~~~~~----~~~~~~g~----~~fd~~~~-i~~~~~~ 87 (428)
T 3mqd_A 18 GPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEE-YAELG----FRCQVHGA----PDIDIESL-VDRRAMR 87 (428)
T ss_dssp ----CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHH-HHHTT----CSCCEEEC----CCCCHHHH-SCTGGGT
T ss_pred CCCCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCc-ccccC----CCcccccc----cCCChhhc-CCHHHHh
Confidence 334557899999999999999999999999999999998653 43321 1222 222 37999999 9999999
Q ss_pred cCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhh-------hhhhhhccCCccccccchhhHHHHHHH
Q psy1120 107 TMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT-------WFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 107 ~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
.|||+++|+++++++||+|||++++++++.++|||+|++.+++... .......++++.+++...++++++|++
T Consensus 88 ~~d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 167 (428)
T 3mqd_A 88 FHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLAT 167 (428)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHH
Confidence 9999999999999999999999999999999999999988776521 123345678888999999999999999
Q ss_pred hhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC------CCCCCCCcccCCC
Q psy1120 180 WLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFDEAAN 253 (883)
Q Consensus 180 ~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls------~~g~~~pfd~~~~ 253 (883)
.||++||+++|+++|+||++||++|+++|++|+||+|||||+|. +++.....|..+++++ |++.|+|||.+++
T Consensus 168 ~lgl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~ 246 (428)
T 3mqd_A 168 FFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRD 246 (428)
T ss_dssp HTTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCC
T ss_pred HcCCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccccCCcccccCcccCCCC
Confidence 99999999999999999999999999999999999999999999 4566666789999888 4589999999999
Q ss_pred CcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCC
Q psy1120 254 GYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTG 329 (883)
Q Consensus 254 G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtg 329 (883)
|+++||||+++||+++++|+ +||++|+|+++++||.+ ++.|++.++.++|++||+ |++ +||||||+||||
T Consensus 247 G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~Hgtg 320 (428)
T 3mqd_A 247 GFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYD---MVAPSGEGAIRCMKMALS--TVT-SKIDYINPHATS 320 (428)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---SSSCCSHHHHHHHHHHHT--TCC-SCCCEEECCCCS
T ss_pred CcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCC---CCCCCHHHHHHHHHHHHh--CCc-cccCEEEEeCCC
Confidence 99999999999999999886 59999999999999963 788999999999999999 999 999999999999
Q ss_pred CCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 330 TKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 330 t~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|++||++|++||.++|+.. ...++|+|+|+|+||++||||+++++|++++|++++|||++||++|||.++
T Consensus 321 T~~~D~~E~~al~~~~~~~-~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~ 390 (428)
T 3mqd_A 321 TPAGDAPEIEAIRQIFGAG-DVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFA 390 (428)
T ss_dssp CHHHHHHHHHHHHHHHCSG-GGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGT
T ss_pred CCCcCHHHHHHHHHHhccc-CCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccc
Confidence 9999999999999999732 234789999999999999999999999999999999999999999999875
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-65 Score=582.61 Aligned_cols=356 Identities=26% Similarity=0.388 Sum_probs=319.0
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+||||||++|++.++++||++|.+|++++++.+ +|+...+ .....+ .++.||+.+ ++++++++.|||++
T Consensus 28 ~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~~---~~~~~~---~i~~fd~~~-~~~~~~~~~~d~~~ 99 (437)
T 2gqd_A 28 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKIT-RIDTEPY---SVHLAG---ELKNFNIED-HIDKKEARRMDRFT 99 (437)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC-SSCCTTS---SCCEEE---CCSSCCGGG-TSCSTTTTTSCHHH
T ss_pred CCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCC-ccccccC---ccceeE---EeCCCChhc-CCCHHHHHhcCHHH
Confidence 689999999999999999999999999999998764 4544311 112223 345699886 59999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhh-------hhhhhhccCCccccccchhhHHHHHHHhhCCCC
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT-------WFYEKLQINGFGITGCSRAMLANRVSYWLGVNG 185 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G 185 (883)
+|+++++++||+|||++++++++.++|||+|++.+++... .......++++.+++...++++++|++.|||+|
T Consensus 100 ~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g 179 (437)
T 2gqd_A 100 QYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKG 179 (437)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999988774321 122334567788888888999999999999999
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC----CCCCCCCcccCCCCcccccce
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCRSEAV 261 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls----~~g~~~pfd~~~~G~~~gEGa 261 (883)
|+++|+++|+||++||++|+++|++|+||+|||||+|.+++|..+..|..+++++ |++.|+|||.+++|+++|||+
T Consensus 180 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~v~geGa 259 (437)
T 2gqd_A 180 PNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGA 259 (437)
T ss_dssp SEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTCCSBCBBCEE
T ss_pred ceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCCCCceeeceE
Confidence 9999999999999999999999999999999999999989999999999999998 578999999999999999999
Q ss_pred EEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcH
Q psy1120 262 CIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDP 335 (883)
Q Consensus 262 ~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~ 335 (883)
+++||+++++|+ +||++|+|++.++|+.+ ++.| ++.+|.++|+++|+++|++|+||||||+|||||++||+
T Consensus 260 aavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~ 336 (437)
T 2gqd_A 260 GILVIESLESAQARGANIYAEIVGYGTTGDAYH---ITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDL 336 (437)
T ss_dssp EEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSC---SSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHH
T ss_pred EEEEECcHHHHHhCCCceEEEEEEEEecCCCCC---CCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCH
Confidence 999999999885 59999999999999964 4445 67899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 336 EEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 336 ~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+|++||.++|+.. ..+++|+|+|+++||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 337 ~E~~al~~~fg~~-~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~ 400 (437)
T 2gqd_A 337 NEVKAIKNTFGEA-AKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECD 400 (437)
T ss_dssp HHHHHHHHHHGGG-GTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCC
T ss_pred HHHHHHHHHHhcc-CCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 9999999999742 346999999999999999999999999999999999999999999999987
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-65 Score=586.54 Aligned_cols=358 Identities=21% Similarity=0.362 Sum_probs=316.3
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++||||||||++|+|.++++||++|.+|++++++.+ +|+... .+.+.+ ..+ .||+.||+|++++++.|||++
T Consensus 3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~----~~~~~~--~~~-~fd~~~~~i~~~~~~~~d~~~ 74 (424)
T 1tqy_A 3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRIS-FFDPSP----YRSQVA--AEA-DFDPVAEGFGPRELDRMDRAS 74 (424)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC-SSCCTT----SSCCEE--ECC-CCCHHHHTCCHHHHHHSCHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCC-Cccccc----CCccee--EEe-ccCHhhcCCCHHHHHhcCHHH
Confidence 479999999999999999999999999999998764 454431 111111 123 799999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh---------hhhhccCCccccccchhhHHH----HHHH
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF---------YEKLQINGFGITGCSRAMLAN----RVSY 179 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~a~----~is~ 179 (883)
+|+++++++||+|||++++++++.|+|||+|++.+++..... ......+++..++..+++.++ +|++
T Consensus 75 ~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~ 154 (424)
T 1tqy_A 75 QFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAW 154 (424)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHH
Confidence 999999999999999999999999999999999887643211 122234566666666666666 9999
Q ss_pred hhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC-----CCCCCCcccCCCC
Q psy1120 180 WLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP-----DGRCKSFDEAANG 254 (883)
Q Consensus 180 ~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~~~G 254 (883)
.||++||+++|+++||||++||++|+++|++|+||+|||||+|.+++|..+..|..++++++ ++.|||||.+++|
T Consensus 155 ~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 234 (424)
T 1tqy_A 155 AVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDG 234 (424)
T ss_dssp HHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTCCC
T ss_pred hcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999986 7899999999999
Q ss_pred cccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC
Q psy1120 255 YCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330 (883)
Q Consensus 255 ~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt 330 (883)
+++|||++++||+++++|+ +||++|+|++.++|+.+ ...+.|++.++.++|+++|+++|++|+||||||+|||||
T Consensus 235 ~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt 313 (424)
T 1tqy_A 235 FVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYH-MTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGT 313 (424)
T ss_dssp BCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSC-SSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCC
T ss_pred eeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCC-CCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccC
Confidence 9999999999999999875 59999999999999975 233445678999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 331 ~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
++||++|.++|.++|+. ...+++|+|+|+++||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 314 ~~gD~~E~~al~~~f~~-~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~ 382 (424)
T 1tqy_A 314 RQNDRHETAAYKRALGE-HARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECD 382 (424)
T ss_dssp HHHHHHHHHHHHHHTGG-GGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBC
T ss_pred cCcCHHHHHHHHHHhcc-cCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Confidence 99999999999999964 2346889999999999999999999999999999999999999999999987
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-65 Score=581.93 Aligned_cols=355 Identities=21% Similarity=0.300 Sum_probs=319.9
Q ss_pred CCCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCC
Q psy1120 30 APGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMD 109 (883)
Q Consensus 30 ~~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~d 109 (883)
...++|+||||||++|+|.+.++||++|++|++++++.+ +|+... ++ ....| .++.||+.|| +++++++.||
T Consensus 6 ~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~-~~--~~~~~---~v~~fd~~~~-~~~~~~~~~d 77 (415)
T 1tqy_B 6 DDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVT-RFDVSR-YP--ATLAG---QIDDFHAPDH-IPGRLLPQTD 77 (415)
T ss_dssp ----CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECT-TTTGGG-SS--CCEEE---CCCSCCHHHH-SCTTTGGGCC
T ss_pred CCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECC-cccccC-CC--cceEE---EeCCCCchhc-CCHHHHHhcC
Confidence 345789999999999999999999999999999998864 565432 11 12233 3457999988 9999999999
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHhhC
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYWLG 182 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 182 (883)
|+++|+++++++||+|||++++++++.++|||+|++.+++.... ......++++.+++...++++++|++.||
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 99999999999999999999999999999999999988875321 12334677888888899999999999999
Q ss_pred CCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC----CCCCCCCcccCCCCcccc
Q psy1120 183 VNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCRS 258 (883)
Q Consensus 183 l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls----~~g~~~pfd~~~~G~~~g 258 (883)
++||+++|+++|+||++||++|+++|++| ||+|||||+|.++++..+..|..+++++ ++++|+|||.+++|+++|
T Consensus 158 l~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~~~~G~~~g 236 (415)
T 1tqy_B 158 MRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGYVPG 236 (415)
T ss_dssp CCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTSTTCCCBCBB
T ss_pred CCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCCCCCCccee
Confidence 99999999999999999999999999999 9999999999999999999999999999 899999999999999999
Q ss_pred cceEEEEEccccccc-----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCC
Q psy1120 259 EAVCIMYLQKSKDAK-----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333 (883)
Q Consensus 259 EGa~~vvL~~~~~A~-----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~g 333 (883)
||++++||+++++|+ ++|++|+|++.++|+.+ ++.|+. +|.++|+++|+++|++|+||||||+|||||++|
T Consensus 237 eGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~---~~~p~~-~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~ 312 (415)
T 1tqy_B 237 EGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP---GSGRPA-GLERAIRLALNDAGTGPEDVDVVFADGAGVPEL 312 (415)
T ss_dssp CEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCT---TCCCCC-SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHH
T ss_pred eeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCC---CCCCCH-HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCc
Confidence 999999999998874 68999999999999965 777877 999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 334 D~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|++|+.|+.++|+.. +++|+++|+|+||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 313 D~~E~~al~~~~g~~---~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~ 376 (415)
T 1tqy_B 313 DAAEARAIGRVFGRE---GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYG 376 (415)
T ss_dssp HHHHHHHHHHHHCTT---CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGC
T ss_pred CHHHHHHHHHHhCCC---CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 999999999999642 4899999999999999999999999999999999999999999999987
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-65 Score=581.83 Aligned_cols=348 Identities=22% Similarity=0.338 Sum_probs=313.1
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCC-CccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQ-RTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
++|+||||||++|+|.++++||++|.+|++++++.+ +|+... .+. ..+ .++ ||+.+| +++++++.|||+
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~----~~~~~~~---~v~-fd~~~~-~~~~~~~~~d~~ 71 (406)
T 2vba_A 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQ-ELKDSG----MRSHVWG---NVK-LDTTGL-IDRKVVRFMSDA 71 (406)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECH-HHHHTT----CSCCEEE---CCC-CCCTTS-SCHHHHTTCCHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCC-cccccC----CccceEE---Eec-CChhhc-CCHHHHHhcCHH
Confidence 479999999999999999999999999999998765 454331 122 223 244 999999 999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCC-CceEEEEccCCCchhhhhh--------hhhhccCCccccccchhhHHHHHHHhhC
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRG-SKTGVFIGACFSESEKTWF--------YEKLQINGFGITGCSRAMLANRVSYWLG 182 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~-~~~gv~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~is~~~~ 182 (883)
++|+++++++||+|||++++++++ .|+|||+|++.+++..... .....++++.+++...++++++|++.||
T Consensus 72 ~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 151 (406)
T 2vba_A 72 SIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFK 151 (406)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhcc
Confidence 999999999999999999888887 8999999999887643211 1223467778888888999999999999
Q ss_pred CCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC------CCCCCCCcccCCCCcc
Q psy1120 183 VNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFDEAANGYC 256 (883)
Q Consensus 183 l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls------~~g~~~pfd~~~~G~~ 256 (883)
++||+++|+++|+||++||++|+++|++|+||+|||||+|.++++..+. |..+++++ |++.|+|||.+++|++
T Consensus 152 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v 230 (406)
T 2vba_A 152 IHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFV 230 (406)
T ss_dssp CCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTTBTTCCSBC
T ss_pred CCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcCcCCCCceE
Confidence 9999999999999999999999999999999999999999988887777 99999998 5789999999999999
Q ss_pred cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~ 332 (883)
+|||++++|||++++|+ +||++|+|++.++|+. .++.|++.+|.++|+++|+++| +||||||+|||||+.
T Consensus 231 ~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~---~~t~p~~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~ 304 (406)
T 2vba_A 231 IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGA---DMVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPV 304 (406)
T ss_dssp BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCS---CTTSCCSHHHHHHHHHHHTTCC---SCCCEEECCCCSCHH
T ss_pred eeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCC---CCCCCCHHHHHHHHHHHHhhCC---CCccEEEeeCccCcc
Confidence 99999999999999885 5999999999999996 3788999999999999999999 899999999999999
Q ss_pred CcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 333 gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
||++|.++|.++|+.. .++|+|+|+++||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 305 gD~~E~~al~~~fg~~---~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~ 369 (406)
T 2vba_A 305 GDVKELAAIREVFGDK---SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAA 369 (406)
T ss_dssp HHHHHHHHHHHHHTTC---CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCT
T ss_pred cCHHHHHHHHHHhCcC---CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCcc
Confidence 9999999999999642 3789999999999999999999999999999999999999999999986
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-65 Score=579.28 Aligned_cols=360 Identities=26% Similarity=0.382 Sum_probs=323.7
Q ss_pred CCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCCh
Q psy1120 31 PGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDP 110 (883)
Q Consensus 31 ~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp 110 (883)
+.++|+||||||++|+|.++++||++|++|++++++.+ +|+... .+.+ ...+++.||+.+| |++++++.|||
T Consensus 2 ~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~----~~~~--~~~~v~~fd~~~~-i~~~~~~~~d~ 73 (413)
T 3o04_A 2 DKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMT-RLNPDD----FPVK--IAAELKDFDVEKY-LEKKEARKMDR 73 (413)
T ss_dssp CCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC-SSCGGG----SSCC--EEECCSSCCGGGT-SCHHHHTTSCH
T ss_pred CCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCC-cccccc----Cccc--cccccCCCChhhc-cCHHHHhhCCH
Confidence 34689999999999999999999999999999999764 343321 1111 2235778999999 99999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHhhCC
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYWLGV 183 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~~~l 183 (883)
++||+++++++||+|||++++++++.++|||+|++.++..... ........++.+++...++++++|++.||+
T Consensus 74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 153 (413)
T 3o04_A 74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA 153 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999876543321 223445677888888999999999999999
Q ss_pred CCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC----CCCCCCCcccCCCCccccc
Q psy1120 184 NGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCRSE 259 (883)
Q Consensus 184 ~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls----~~g~~~pfd~~~~G~~~gE 259 (883)
+||+++|+++|+|+++||+.|+++|++|+||+|||||+|.++++.....|...+.++ +++.|+|||.+++|+++||
T Consensus 154 ~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~g~~~gd 233 (413)
T 3o04_A 154 KGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDRDGFIIGE 233 (413)
T ss_dssp CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTTCCSBCBBC
T ss_pred CCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCCCCCceEec
Confidence 999999999999999999999999999999999999999999999999999999998 7889999999999999999
Q ss_pred ceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcH
Q psy1120 260 AVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDP 335 (883)
Q Consensus 260 Ga~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~ 335 (883)
||+++||+++++|+ +++++|+|++.++|+.+ .....|++.++.++++++|+++|++|+||||||+|||||+++|+
T Consensus 234 GAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~-~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~ 312 (413)
T 3o04_A 234 GAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYH-ITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDE 312 (413)
T ss_dssp EEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSC-SSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHH
T ss_pred cEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCC-CCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCH
Confidence 99999999999886 59999999999999975 33455677889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 336 EEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 336 ~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+|.++|.++|+.. ..+++|+++|+++||++||||+++++|++++|++++|||++||++|||.++
T Consensus 313 ~e~~al~~~~~~~-~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~ 376 (413)
T 3o04_A 313 YETQAIKTVFGEH-AKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCD 376 (413)
T ss_dssp HHHHHHHHHHGGG-TTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCC
T ss_pred HHHHHHHHHhccc-CCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCC
Confidence 9999999999752 357999999999999999999999999999999999999999999999998
|
| >3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-64 Score=553.46 Aligned_cols=315 Identities=19% Similarity=0.235 Sum_probs=275.3
Q ss_pred CCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy1120 460 RPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILR 538 (883)
Q Consensus 460 ~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~ 538 (883)
+|++|||||||+||+|||++||+ +|.||+.+++|++++ |+++.+++++++.+.++++.++||+||++|+|++++|+
T Consensus 2 ~kvafvF~GQGsQ~~gMg~~L~~~~p~fr~~~~~~~~~l---g~~l~~~~~~~~~~~l~~t~~~Qpai~a~q~al~~ll~ 78 (336)
T 3ptw_A 2 AKLGFLFAGQGAQYVGMGKEFFDNFEESKEVFKRSSEAL---GIDMEELCFNDPEGLLNKTEFTQPAIITTNMAILTALD 78 (336)
T ss_dssp CCEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHH---TSCHHHHHHTCTTSCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcccchhhHHHHHHHhCHHHHHHHHHHHHHc---CCCHHHHhhCCChhhhcccchHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999997 999999999999998 99999999887777899999999999999999999999
Q ss_pred HcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC-----CCeEEe
Q psy1120 539 ALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP-----PEIEVA 611 (883)
Q Consensus 539 ~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~-----~~v~iA 611 (883)
+|||+|++++|||+|||+|+|+||+||++||+++++.||++|++. ....|+|+|| +++.+++++++. +.|+||
T Consensus 79 ~~Gi~P~~v~GHSlGE~aAa~~AG~ls~~dal~lv~~Rg~lm~~~~~~~~G~M~AV~~~~~~~v~~~l~~~~~~~~v~iA 158 (336)
T 3ptw_A 79 KLGVKSHISCGLSLGEYSALIHSGAINFEDGVKLVKKRGKFMQEAVAEGIGGMVAVLRMTPEQVDEIIEKSSPYGIVEGA 158 (336)
T ss_dssp HTTCCCSEEEESTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSSCTTTEEEEEEESCCHHHHHHHHHHHGGGSCEEEE
T ss_pred HcCCCCCEEEEcCHhHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCHHHHHHHHHhcccCCeEEEE
Confidence 999999999999999999999999999999999999999999876 3457999999 999999999885 349999
Q ss_pred eecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCC
Q psy1120 612 CHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKP 691 (883)
Q Consensus 612 ~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 691 (883)
|+|||+|+||||+.++|+++.+.|+++|+++++|+| ++||||++| + ++.+ +|++.+. .+. .++
T Consensus 159 ~~Nsp~~~VisG~~~al~~~~~~l~~~g~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~--~~~ 221 (336)
T 3ptw_A 159 NYNSPGQIVISGELVALEKAMEFIKEVGGRAIKLPV-SAPFHCSML---Q--PAAE----KLEDELN-----KIS--INK 221 (336)
T ss_dssp EEEETTEEEEEEEHHHHHHHHHHHHHTTCEEEECSC-SSCTTSGGG---H--HHHH----HHHHHHT-----TSC--CCC
T ss_pred EEecCCcEEEEcCHHHHHHHHHHHHhcCCcEEECCC-CCCcccHHH---H--HHHH----HHHHHHh-----cCC--CCC
Confidence 999999999999999999999999999999999999 999999999 7 6666 7888777 444 467
Q ss_pred CCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcCCCccEEeec
Q psy1120 692 RSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLPKTVTNVSLT 769 (883)
Q Consensus 692 ~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~~~~~~~~~~ 769 (883)
|.+|++|++++...... ...++||++|+++||+|.++++.+.+.+ +|||||||++|+++++++++ ....++..
T Consensus 222 p~ip~~S~vtg~~~~~~----~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~fvEiGP~~~L~~~i~~~~~-~~~~~~~~ 296 (336)
T 3ptw_A 222 LNGIVMSNVKGEAYLED----DNIIELLTSQVKKPVLFINDIEKMIESGVDTFIEIGPGKALSGFVKKINK-NVTVLNVE 296 (336)
T ss_dssp CCSEEEETTTTEECCTT----SCHHHHHHHHTTSCBCHHHHHHHHHHTTCCEEEEESSCSHHHHHHHHHCS-SSEEEEES
T ss_pred CCceEEECCCCcccCCh----hhHHHHHHHHhhcceeHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHHcC-CCCeEecC
Confidence 89999999999765321 2368999999999999999999999875 69999999999999999985 33333332
Q ss_pred cCCCcchHHHHHHHHHHHHHcCCCCCCCCcCCC
Q psy1120 770 QRENANSVLYLLQALGKLYESGVHPHLANLYPK 802 (883)
Q Consensus 770 ~~~~~~~~~~ll~~l~~L~~~G~~vd~~~~~~~ 802 (883)
+..+.+.+++.++++|..|.++||+.+|..
T Consensus 297 ---~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~ 326 (336)
T 3ptw_A 297 ---DLKSLEKTLSKLREMEVLAENLYFQSHHHH 326 (336)
T ss_dssp ---SHHHHHHHHHHHHHHHHHHCC---------
T ss_pred ---CHHHHHHHHHHHHHHHHhhccCChhhhccc
Confidence 245788999999999999999999999864
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-64 Score=573.45 Aligned_cols=356 Identities=23% Similarity=0.334 Sum_probs=320.2
Q ss_pred CCCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCC
Q psy1120 30 APGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMD 109 (883)
Q Consensus 30 ~~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~d 109 (883)
|..++|+||||||++|++.++++||++|.+|++++++.+ +|+...+ .....+ .++.||+.+| +++++++.||
T Consensus 20 m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~~---~~~~~~---~v~~fd~~~~-~~~~~~~~~d 91 (430)
T 1ox0_A 20 MKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGIT-KFDHSDF---DVHNAA---EIQDFPFDKY-FVKKDTNRFD 91 (430)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECC-SSCCTTS---SCCEEE---CCSSCCHHHH-CCGGGGGTCC
T ss_pred ccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCC-cccccCC---ccceee---eccCCChhhc-CCHHHHHhcC
Confidence 445789999999999999999999999999999998865 4554311 111223 3457999887 9999999999
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhh-------hhhhhhccCCccccccchhhHHHHHHHhhC
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT-------WFYEKLQINGFGITGCSRAMLANRVSYWLG 182 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 182 (883)
|+++|+++++++||+|||++++++++.++|||+|++.+++... .......++++.+++...++++++|++.||
T Consensus 92 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 171 (430)
T 1ox0_A 92 NYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFG 171 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhc
Confidence 9999999999999999999999999999999999988775321 122334567788888889999999999999
Q ss_pred CCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC----CCCCCCCcccCCCCcccc
Q psy1120 183 VNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCRS 258 (883)
Q Consensus 183 l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls----~~g~~~pfd~~~~G~~~g 258 (883)
++||+++|+++|+||++||++|+++|++|+||+|||||+|.+++|..+..|..+++++ +++.|+|||.+++|+++|
T Consensus 172 l~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g~~~g 251 (430)
T 1ox0_A 172 ANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVMG 251 (430)
T ss_dssp CCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCSBCBC
T ss_pred CCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCCcccc
Confidence 9999999999999999999999999999999999999999999999889999999999 789999999999999999
Q ss_pred cceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCC
Q psy1120 259 EAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332 (883)
Q Consensus 259 EGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~ 332 (883)
|||+++||+++++|+ +||++|+|++.++|+.+ ++.| ++.++.++|+++|+++|++|+||||||+|||||+.
T Consensus 252 eGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 328 (430)
T 1ox0_A 252 EGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYH---MTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPA 328 (430)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHH
T ss_pred ceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCC---CCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcc
Confidence 999999999998875 58999999999999964 5556 67899999999999999999999999999999999
Q ss_pred CcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 333 gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+|++|..++.++|+. +++|+|+|+++||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 329 ~D~~E~~al~~~~g~----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~ 392 (430)
T 1ox0_A 329 NEKGESGAIVAVLGK----EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIE 392 (430)
T ss_dssp HHHHHHHHHHHHHCS----SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCC
T ss_pred cCHHHHHHHHHHhCC----CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 999999999999963 5899999999999999999999999999999999999999999999987
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-63 Score=567.88 Aligned_cols=354 Identities=23% Similarity=0.296 Sum_probs=315.4
Q ss_pred CCCCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccc--cCCCCCCCCCCccccccCCCCCcccCCCChhhhhc
Q psy1120 30 APGDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWK--LGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHT 107 (883)
Q Consensus 30 ~~~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~ 107 (883)
...++||||||||++|+|.++++||++|++|++++++.+ +|+ ... . .....|++.+ |+.+| +++++++.
T Consensus 25 ~~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~~~-~--~~~~~~~v~~----d~~~~-~~~~~~~~ 95 (434)
T 2gp6_A 25 KAFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLD-DPFVEEFD-L--PVRIGGHLLE----EFDHQ-LTRIELRR 95 (434)
T ss_dssp TTSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECC-CHHHHHHC-C--SCCEEECCSC----CSTTS-SCHHHHHT
T ss_pred CCCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCC-cccccccc-C--ccceeEEcCC----chhhh-CCHHHHHh
Confidence 345689999999999999999999999999999999865 454 211 1 1123344442 77777 99999999
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHh
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYW 180 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~ 180 (883)
|||+++|+++++++||+|||+ +++++.++|||+|++.+++..... .....++++.+++...++++++|++.
T Consensus 96 ~d~~~~l~l~aa~~ALedAG~--~~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 173 (434)
T 2gp6_A 96 MGYLQRMSTVLSRRLWENAGS--PEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLE 173 (434)
T ss_dssp CCHHHHHHHHHHHHHHHHTTC--CCCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCC--CccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhh
Confidence 999999999999999999999 567788999999999888753211 22335677778888899999999999
Q ss_pred hCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcC-CCC-----CCCCCCCcccCCCC
Q psy1120 181 LGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLG-VLS-----PDGRCKSFDEAANG 254 (883)
Q Consensus 181 ~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~-~ls-----~~g~~~pfd~~~~G 254 (883)
||++||+++|+++|+|+++||++|+++|++|+||++||||+|.++.+..+..|+.++ +++ +++.|+|||.+++|
T Consensus 174 lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g 253 (434)
T 2gp6_A 174 RHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDG 253 (434)
T ss_dssp SCCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCC
T ss_pred hcCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999 888 78999999999999
Q ss_pred cccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEEecC
Q psy1120 255 YCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEVDPKNLAWIEAHGT 328 (883)
Q Consensus 255 ~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl~~~dI~~ve~hgt 328 (883)
+++|||++++||+++++|+ +++++|+|++.++||.+ ++.| ++.++.++|+++|+++|++|+||||||+|||
T Consensus 254 ~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~---~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgt 330 (434)
T 2gp6_A 254 FVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFH---MVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHAT 330 (434)
T ss_dssp CCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSC---SSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCC
T ss_pred cceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCC---CCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCC
Confidence 9999999999999998875 58999999999999975 4555 7789999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 329 GTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 329 gt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
||+++|++|..+|.++|+.. +++++++|+++||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 331 gt~~~D~~E~~al~~~fg~~---~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~ 399 (434)
T 2gp6_A 331 GTQVGDLAEGRAINNALGGN---RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEID 399 (434)
T ss_dssp SCHHHHHHHHHHHHHHHTTC---CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCC
T ss_pred cCccchHHHHHHHHHHhccC---CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 99999999999999999642 7999999999999999999999999999999999999999999999987
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-63 Score=567.59 Aligned_cols=351 Identities=21% Similarity=0.282 Sum_probs=314.0
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccc--cCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCC
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWK--LGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMD 109 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~d 109 (883)
.++||||||||++|+|.++++||++|++|++++++.+ +|+ ... . .....|++++ |+.+| |++++++.||
T Consensus 11 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~~~-~--~~~~~~~~~~----d~~~~-~~~~~~~~~d 81 (416)
T 2wge_A 11 FPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALE-DEFVTKWD-L--AVKIGGHLKD----PVDSH-MGRLDMRRMS 81 (416)
T ss_dssp SCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECC-CHHHHHHT-C--SCCEEBCCSS----CGGGG-CCHHHHHHSC
T ss_pred CCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCC-cccccccc-C--CccEEEEeCC----chhhh-CCHHHHHhcC
Confidence 4689999999999999999999999999999999865 454 211 1 1223455543 88888 9999999999
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHhhC
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYWLG 182 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 182 (883)
|+++|+++++++||+|||+ ++++..++|||+|++.+++.... ......+.++.+++...++++++|++.||
T Consensus 82 ~~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 159 (416)
T 2wge_A 82 YVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLG 159 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhc
Confidence 9999999999999999999 56788899999999988764321 12334577888888889999999999999
Q ss_pred CCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----CCCCCCCcccCCCCccc
Q psy1120 183 VNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCR 257 (883)
Q Consensus 183 l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----~~g~~~pfd~~~~G~~~ 257 (883)
++||+++|+++|+||++||++|+++|++|+||++||||+|.++.+.....|...+.++ +++.|+|||.+++|+++
T Consensus 160 l~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~ 239 (416)
T 2wge_A 160 ARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVF 239 (416)
T ss_dssp CCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCB
T ss_pred cCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccc
Confidence 9999999999999999999999999999999999999999999998899999999998 68899999999999999
Q ss_pred ccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCC
Q psy1120 258 SEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTK 331 (883)
Q Consensus 258 gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~ 331 (883)
|||++++||+++++|+ +++++|+|++.++|+.+ ++.| ++.++.++|+++|+++|++|+||||||+|||||+
T Consensus 240 geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~---~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~ 316 (416)
T 2wge_A 240 GEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFH---MVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATP 316 (416)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSC---SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCH
T ss_pred cCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCC---ccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCc
Confidence 9999999999998875 58999999999999964 5556 7789999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 332 VGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 332 ~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+||++|+.|+..+ +. .++++++.|+++||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 317 ~gD~~E~~al~~~-~~---~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~ 381 (416)
T 2wge_A 317 IGDAAEANAIRVA-GC---DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEID 381 (416)
T ss_dssp HHHHHHHHHHHHT-TC---TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTC
T ss_pred CCCHHHHHHHHHh-cc---CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 9999999999998 43 26899999999999999999999999999999999999999999999987
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-63 Score=566.78 Aligned_cols=361 Identities=24% Similarity=0.321 Sum_probs=321.4
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccc----cCCCCCcccCCCChhhhhc
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLY----EVNKFDAAFFGVHFKQAHT 107 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~fD~~~f~i~~~~~~~ 107 (883)
.++|||||||+++|+|.++++||++|++|++++++.+ +|+.+.+. ....+.++ ++..||+.|| |++++++.
T Consensus 9 ~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~fd~~~~-i~~~~~~~ 83 (428)
T 3kzu_A 9 MRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVT-EFEVDDLA---CQIACRIPVGDGTNGTFNPDLH-MDPKEQRK 83 (428)
T ss_dssp CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECC-SSCCTTSS---CCEEECCCBSSSSTTCBCGGGT-SCHHHHTT
T ss_pred ccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCC-ccccccCc---CceeeEecccccccccCChhhc-CCHHHHHh
Confidence 4689999999999999999999999999999999864 45443211 12233333 4568999999 99999999
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCC-CCCCceEEEEccCCCchhhh-------hhhhhhccCCccccccchhhHHHHHHH
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKS-LRGSKTGVFIGACFSESEKT-------WFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~-~~~~~~gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
|||++||+++++++||+|||+++++ +++.++|||+|++.+++... .......++++..++...++++++|++
T Consensus 84 ~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 163 (428)
T 3kzu_A 84 VDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSI 163 (428)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHH
Confidence 9999999999999999999999988 88889999999987764322 122344678888899999999999999
Q ss_pred hhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCC------CCCCCcccCCC
Q psy1120 180 WLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPD------GRCKSFDEAAN 253 (883)
Q Consensus 180 ~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~------g~~~pfd~~~~ 253 (883)
.||++||+++|+++|+||++||++|+++|++|+||+|||||+|.+++|..+..|...+.++++ +.|+|||.+++
T Consensus 164 ~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 243 (428)
T 3kzu_A 164 KHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRD 243 (428)
T ss_dssp HHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCC
T ss_pred HcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999865 68999999999
Q ss_pred CcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCC
Q psy1120 254 GYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTG 329 (883)
Q Consensus 254 G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtg 329 (883)
|+++|||++++||+++++|+ +|+++|+|++.++|+++. ....|++.++.++++++|+++|++|+||||||+||||
T Consensus 244 G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~-~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtg 322 (428)
T 3kzu_A 244 GFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHI-TAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTS 322 (428)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCS-SSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCS
T ss_pred ceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCC-CCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCc
Confidence 99999999999999999886 599999999999998642 2233467799999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 330 TKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 330 t~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
| .+|++|..++.++|+. ...+++++++|+++||++||||+++++|++++|++++|||++||++|||.++
T Consensus 323 T-~~d~~e~~al~~~~g~-~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~ 391 (428)
T 3kzu_A 323 T-MADTIELGAVERVVGE-AAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTR 391 (428)
T ss_dssp S-TTHHHHHHHHHHHHGG-GGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCS
T ss_pred c-hhhHHHHHHHHHHhcc-CCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCC
Confidence 9 9999999999999964 2357999999999999999999999999999999999999999999999987
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-64 Score=570.08 Aligned_cols=357 Identities=24% Similarity=0.381 Sum_probs=318.6
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+||||||++|+|.++++||++|++|++++++.+ +|+... + .....+.+ +||+.+| +++++++.|||++
T Consensus 2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~-~~~~~~-~--~~~~~~~~----~fd~~~~-~~~~~~~~~d~~~ 72 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT-RFDASA-L--PVRIAAEV----DVDPGAY-LDRKELRRLDRFV 72 (408)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC-SSCCTT-S--SCCEEECC----CCCGGGT-SCHHHHTTSCHHH
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeecc-ccCccc-C--ccceEEEE----ccChhhc-CCHHHHHhcCHHH
Confidence 479999999999999999999999999999998864 455431 1 11223333 6999987 9999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHhhCCCC
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYWLGVNG 185 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G 185 (883)
+|+++++++||+|||+++++++..++||++|++.+++.... ......++++.+++...++++++|++.||++|
T Consensus 73 ~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g 152 (408)
T 1j3n_A 73 QYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTG 152 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999888764321 22334567788888889999999999999999
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC-----CCCCCCcccCCCCcccccc
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP-----DGRCKSFDEAANGYCRSEA 260 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~~~G~~~gEG 260 (883)
|+++|+++|+||++||++|+++|++|+||+|||||+|.+++|..+..|..++++++ ++.|+|||.++||+++|||
T Consensus 153 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geG 232 (408)
T 1j3n_A 153 PSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEG 232 (408)
T ss_dssp CBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCE
T ss_pred ceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeee
Confidence 99999999999999999999999999999999999999999999999999999986 5789999999999999999
Q ss_pred eEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHH
Q psy1120 261 VCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPE 336 (883)
Q Consensus 261 a~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~ 336 (883)
++++||+++++|+ +++++|+|++.++|+.+ .....|++.++.++|+++|+++|++|+||||||+|||||++||++
T Consensus 233 aaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~ 311 (408)
T 1j3n_A 233 AGVLVLEAYEHAKKRGARIYAELVGFGRSADAHH-ITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRA 311 (408)
T ss_dssp EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC-SSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHH
T ss_pred EEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCC-CCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHH
Confidence 9999999998875 59999999999999975 223334788999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 337 EVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 337 E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|..++.++|+.. ..+++++++|+++||+++|||+++++|++++|+++.|||++||++|||.++
T Consensus 312 E~~al~~~~g~~-~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 374 (408)
T 1j3n_A 312 EVLAIKRVFGDH-AKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELD 374 (408)
T ss_dssp HHHHHHHHHHHH-HTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSC
T ss_pred HHHHHHHHhcCc-CCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 999999999642 247899999999999999999999999999999999999999999999987
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-64 Score=571.53 Aligned_cols=359 Identities=22% Similarity=0.297 Sum_probs=315.8
Q ss_pred cEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCC--CCC--------CCC-CCccccc---cCCCCCcccCC
Q psy1120 34 EICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGK--EHP--------EIP-QRTGKLY---EVNKFDAAFFG 99 (883)
Q Consensus 34 ~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~--~~~--------~~~-~~~g~~~---~~~~fD~~~f~ 99 (883)
+||||||||++|+|.++++||++|++|++++++.+ +|+... +++ ..+ ...|+++ +++.||+.+|
T Consensus 2 ~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~- 79 (431)
T 2ix4_A 2 RVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLT-LDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALW- 79 (431)
T ss_dssp CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECC-GGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHH-
T ss_pred cEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCC-hhhhhccccccccccccccCcccceeEEeccccccccCChhhc-
Confidence 69999999999999999999999999999999865 344210 010 111 2345565 5678999887
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCC-CCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchh
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGI-NPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRA 171 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~-~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 171 (883)
++++ .|||+++|+++++++||+|||+ +++++++.++|||+|++.+++.... ......+.++.+++...+
T Consensus 80 ~~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (431)
T 2ix4_A 80 LNSK---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVN 156 (431)
T ss_dssp SCST---TCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTT
T ss_pred CChh---hCCHHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhH
Confidence 8876 8999999999999999999999 8888888899999999887653221 122345677778888889
Q ss_pred hHHHHHHHhhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC------CCCC
Q psy1120 172 MLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP------DGRC 245 (883)
Q Consensus 172 ~~a~~is~~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~------~g~~ 245 (883)
+++++|++.||++||+++|+++|+||++||++|+++|++|+||+|||||+|.++++..+..|..++++++ ++.|
T Consensus 157 ~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 236 (431)
T 2ix4_A 157 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEAS 236 (431)
T ss_dssp HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSC
T ss_pred HHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999998899999999985 6899
Q ss_pred CCcccCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCC
Q psy1120 246 KSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEVDPKN 319 (883)
Q Consensus 246 ~pfd~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl~~~d 319 (883)
+|||.+++|+++|||++++||+++++|+ +|+++|+|++.++|+.+ ++.| ++.++.++++++|+++|++|+|
T Consensus 237 ~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~---~~~p~~~~~~~~~ai~~al~~agl~~~d 313 (431)
T 2ix4_A 237 RPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHH---ITQPPEDGKGAVLAMTRALRQSGLCPNQ 313 (431)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---SSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred ccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCC---CCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 9999999999999999999999998874 59999999999999964 5556 6789999999999999999999
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHhhCCCC-CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCC
Q psy1120 320 LAWIEAHGTGTKVGDPEEVQALENVFCPGR-TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKD 398 (883)
Q Consensus 320 I~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~-~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~ 398 (883)
|||||+|||||++||++|..+|.++|+... ..+++|+++|+++||+++|||+++++|++++|+++.|||++||++|||.
T Consensus 314 Id~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~ 393 (431)
T 2ix4_A 314 IDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPI 393 (431)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTT
T ss_pred cCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCC
Confidence 999999999999999999999999996421 2568999999999999999999999999999999999999999999999
Q ss_pred CC
Q psy1120 399 IP 400 (883)
Q Consensus 399 ~~ 400 (883)
++
T Consensus 394 ~~ 395 (431)
T 2ix4_A 394 FD 395 (431)
T ss_dssp CC
T ss_pred CC
Confidence 87
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-63 Score=568.58 Aligned_cols=360 Identities=23% Similarity=0.290 Sum_probs=322.0
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccc-----cCCCCCcccCCCChhhhhc
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLY-----EVNKFDAAFFGVHFKQAHT 107 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~fD~~~f~i~~~~~~~ 107 (883)
++|+||||||++|+|.++++||++|++|++++++.+ +|+...+ .....|.+. ++..||+.+| |++++++.
T Consensus 24 ~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~-~~~~~~~---~~~~~g~v~~~~~~~~~~fd~~~~-i~~~~~~~ 98 (451)
T 4ddo_A 24 LRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLG-DDIAGEL---SAKVGGTVQDVAEDPEGGFDPERS-VPHKELRK 98 (451)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECC-HHHHTTS---SCCEEECCCCTTTCTTTCCCGGGT-SCHHHHTT
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCC-ccccccc---cCccceEccccccccccccchhhh-CCHHHHhh
Confidence 689999999999999999999999999999999865 4544321 112334454 3448999999 99999999
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCCC-CCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHH
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKSL-RGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~~-~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
|||++||+++++++||+|||++++++ ++.++|||+|++.+++.... ......++++..++...++++++|++
T Consensus 99 ~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 178 (451)
T 4ddo_A 99 MDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISI 178 (451)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHH
Confidence 99999999999999999999999998 88899999999877654321 12234567778888889999999999
Q ss_pred hhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCC------CCCCCcccCCC
Q psy1120 180 WLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPD------GRCKSFDEAAN 253 (883)
Q Consensus 180 ~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~------g~~~pfd~~~~ 253 (883)
.|||+||+++|+++|+|+++||++|+++|++|+||+|||||+|.++++..+..|...++++++ +.|+|||.+++
T Consensus 179 ~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 258 (451)
T 4ddo_A 179 KHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRD 258 (451)
T ss_dssp HHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCC
T ss_pred HhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999976 79999999999
Q ss_pred CcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCC
Q psy1120 254 GYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTG 329 (883)
Q Consensus 254 G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtg 329 (883)
|+++|||++++||+++++|+ +|+++|+|++.++|+.+ .....|++.+|.++++++|+++|++|+||||||+||||
T Consensus 259 g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtg 337 (451)
T 4ddo_A 259 GFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYH-MTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATS 337 (451)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSC-SSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCS
T ss_pred CcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCc-cCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCc
Confidence 99999999999999998885 59999999999999864 33445678899999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 330 TKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 330 t~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|+++|++|..++.++|+. ..+++|+|+|+++||++||||+++++|++++|++++|||++||++|||.++
T Consensus 338 t~~~d~~E~~al~~~~~~--~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~ 406 (451)
T 4ddo_A 338 TPVGDAGEIEALKTVFGV--GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAAD 406 (451)
T ss_dssp CHHHHHHHHHHHHHHHCS--SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGT
T ss_pred CcccCHHHHHHHHHHhCC--CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccc
Confidence 999999999999999975 457899999999999999999999999999999999999999999999883
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-62 Score=552.68 Aligned_cols=303 Identities=18% Similarity=0.205 Sum_probs=256.1
Q ss_pred CCCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHH
Q psy1120 458 DTRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDI 536 (883)
Q Consensus 458 ~~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~l 536 (883)
..++++|||||||+||+|||++||+ +|.|++.+++++.. .+....++++.++||+||++|+|++++
T Consensus 95 ~~~~~~fvF~GQGsq~~gMg~~L~~~~~~~~~~~~~~~~~-------------~~~~~~l~~~~~~Qpal~a~q~al~~l 161 (401)
T 4amm_A 95 GPLRVGLLFPGQAAPVHADRGALGHLLGDADAGTGSDPDS-------------GVKPAEPVDTAVAQPAIIADSLAGIRW 161 (401)
T ss_dssp CCCCEEEEECCCCCCBTTCCCSCCC------------------------------CCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcccchhhhHHHHHHhCHHHHHHHHHhhcc-------------CCchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 4578999999999999999999997 89999998887531 112345788999999999999999999
Q ss_pred HHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccccccccc-EEEEcCCHHHHhhcCCC-CeEEeeec
Q psy1120 537 LRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGA-MAAVGLGYKDLRSRCPP-EIEVACHN 614 (883)
Q Consensus 537 l~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~-M~av~~~~~~v~~~l~~-~v~iA~~N 614 (883)
|++|||+|++|+|||+|||+|+|+||+||++|++++++.||++|++.. ..|+ |++|+++.+++++++.. +++|||+|
T Consensus 162 l~~~Gv~P~~v~GHS~GE~aAa~~AG~ls~~da~~lv~~Rg~lm~~~~-~~g~~M~aV~~~~~~v~~~l~~~~v~iA~~N 240 (401)
T 4amm_A 162 LDRLGARPVGALGHSLGELAALSWAGALDADDTLALARARGEAMSAAT-EAPSGMLSLRADLAAARELAAGTGAVVAVDN 240 (401)
T ss_dssp HHHHTCCCSEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHSCC-SSCEEEEEESSCHHHHHHHHTTTSCEEEEEE
T ss_pred HHHcCCCCCEEEECCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHhccCCEEEEEEe
Confidence 999999999999999999999999999999999999999999998753 4555 99999999999999974 69999999
Q ss_pred CCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCc
Q psy1120 615 SPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRST 694 (883)
Q Consensus 615 sp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 694 (883)
||+++||||+.++|+++.+.|+++|+++++|+| ++||||++| + ++.+ +|.+.+. .+. +++|++
T Consensus 241 sp~~~vvsG~~~al~~~~~~l~~~g~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~--~~~p~i 303 (401)
T 4amm_A 241 GERHVVVAGTRPELDRVAEAARHAGIEATPLAV-SHAFHSPLM---A--PAAE----ALRRAAG-----RLP--WRRPER 303 (401)
T ss_dssp ETTEEEEEEEHHHHHHHHHHHHHHTCCEEEBSC-SSCTTSGGG---H--HHHH----HHHHHHH-----TSC--CCCCSS
T ss_pred cCCCEEEECCHHHHHHHHHHHHhCCCeEEECCC-CCCcchHHH---H--HHHH----HHHHHHh-----hCC--CCCCCc
Confidence 999999999999999999999999999999999 999999999 7 6666 8888877 444 467999
Q ss_pred ceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCCEEEEECCCccchHHHHhhcCCCccEEeeccCCCc
Q psy1120 695 KWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNAITLEIAPHGLLQAILRRSLPKTVTNVSLTQRENA 774 (883)
Q Consensus 695 ~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~~~iEiGP~~~L~~~i~~~l~~~~~~~~~~~~~~~ 774 (883)
|+||+++|. ... ....++||++|+++||+|.++++.+. ..+|||||||++|+++ ++++. ..+ .++.|+ .
T Consensus 304 p~~S~vtg~-~~~----~~~~~~y~~~~l~~pV~f~~av~~l~-~~~fvEiGP~~~L~~~-~~~~~--~~~-~~l~~~-~ 372 (401)
T 4amm_A 304 PVASTVTGA-WWA----DEDPVEVLVRQLTGPVRFREALGLLD-ADLLVEVGPGRMLSAL-AEAAG--RTA-VSLDAG-A 372 (401)
T ss_dssp CEECTTTSS-BCC----SCCHHHHHHHHHHSCEEHHHHHHHSC-CSEEEECSSSSHHHHH-HHHTT--CCE-EECCTT-C
T ss_pred eEEECCCCC-cCC----hhHHHHHHHHHHHHHeeHHHHHHHhc-CCEEEEeCCcHHHHHH-HhccC--Cce-EeeCCC-C
Confidence 999999998 322 12358999999999999999999999 7899999999999999 99983 233 345554 4
Q ss_pred chHHHHHHHHHHHHHcCCCCCCCCcCCC
Q psy1120 775 NSVLYLLQALGKLYESGVHPHLANLYPK 802 (883)
Q Consensus 775 ~~~~~ll~~l~~L~~~G~~vd~~~~~~~ 802 (883)
++..++++++++||++|++|||..+|++
T Consensus 373 ~~~~~ll~al~~L~~~G~~vdw~~~~~~ 400 (401)
T 4amm_A 373 ASAAGMAAGTAALFAAGAVDDATPFFAG 400 (401)
T ss_dssp SSSHHHHHHHHHHHHTTSCSCCGGGGSC
T ss_pred chHHHHHHHHHHHHHCCCCCChHHhcCC
Confidence 6799999999999999999999999864
|
| >2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-61 Score=522.58 Aligned_cols=300 Identities=18% Similarity=0.272 Sum_probs=265.3
Q ss_pred CCCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHH
Q psy1120 458 DTRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDI 536 (883)
Q Consensus 458 ~~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~l 536 (883)
..++++|||||||+||+|||++||+ +|+||+.+++|++++ |+++.++++++ ++.++++.++||+||++|+|++++
T Consensus 11 ~~~~~afvFpGQGsQ~~gMg~~L~~~~p~fr~~~~~~~~~l---g~~l~~~~~~~-~~~l~~t~~~Qpai~a~~~al~~l 86 (321)
T 2h1y_A 11 GSMQYALLFPGQGSQCIGMGKSFYEGHTLAKELFERASNAL---KVDMKKTLFEE-NELLKESAYTQPAIYLVSYIAYQL 86 (321)
T ss_dssp -CCCEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHH---TSCHHHHHHSC-CSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchhhhhHHHHHHHhCHHHHHHHHHHHHHc---CCCHHHHHhCC-hhhhccchhHHHHHHHHHHHHHHH
Confidence 3568999999999999999999997 899999999999999 99999999876 566899999999999999999999
Q ss_pred HHHc---CCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEE-EcCCHHHHhhcCCC--CeE
Q psy1120 537 LRAL---NITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAA-VGLGYKDLRSRCPP--EIE 609 (883)
Q Consensus 537 l~~~---Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~a-v~~~~~~v~~~l~~--~v~ 609 (883)
|++| ||+|++++|||+|||+|+|+||+||++||+++++.||++|++. ....|+|++ ++++.+++++++.+ +++
T Consensus 87 l~~~~~~Gi~P~~v~GHSlGE~aAa~~AG~ls~edal~lv~~Rg~lm~~~~~~~~G~M~aVv~~~~~~v~~~l~~~~~v~ 166 (321)
T 2h1y_A 87 LNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKNVW 166 (321)
T ss_dssp HHHHSTTSCCCSEEEECTHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTTSCEEEEEEESSCHHHHHHHHHTSTTEE
T ss_pred HHHhhhcCCCccEEEEcCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhhccCCCCcEEEEecCCHHHHHHHHhhcCCeE
Confidence 9999 9999999999999999999999999999999999999999876 345799999 69999999998863 599
Q ss_pred EeeecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccC
Q psy1120 610 VACHNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQ 688 (883)
Q Consensus 610 iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 688 (883)
|||+|+|+|+||||+.++|+++.+.|+++|+ ++++|+| ++|||||+| + ++.+ +|++.+. .+.
T Consensus 167 iA~~Nsp~~~VisG~~~al~~~~~~l~~~g~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~-- 229 (321)
T 2h1y_A 167 CANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEM-SVASHCPFL---E--PMIF----KFQELLE-----KSL-- 229 (321)
T ss_dssp EEEEEETTEEEEEEEHHHHTTSHHHHHHHTCSEEEECSS-SCCCSSGGG---G--GGHH----HHHHHHH-----HHC--
T ss_pred EEEEecCCcEEEEeCHHHHHHHHHHHHhcCCceEEECCC-CCccccHHH---H--HHHH----HHHHHHh-----cCC--
Confidence 9999999999999999999999999999999 8999999 999999999 7 7777 8888887 443
Q ss_pred CCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC-CEEEEECCCccchHHHHhhcCCCccEEe
Q psy1120 689 PKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN-AITLEIAPHGLLQAILRRSLPKTVTNVS 767 (883)
Q Consensus 689 ~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~-~~~iEiGP~~~L~~~i~~~l~~~~~~~~ 767 (883)
+++|++|++|++++..... ....++||++|+++||+|.++++.+.++ .+|||||||++|+++++++ + ....++
T Consensus 230 ~~~p~ip~~S~vtg~~~~~----~~~~~~~~~~~l~~pV~f~~ai~~l~~~~~~fvEiGP~~~L~~~i~~~-~-~~~~~~ 303 (321)
T 2h1y_A 230 KDKFHFEIISNATNEAYHN----KAKAVELLSLQLTQPVRYQDCVKSNNDRVDIFFELGCGSVLKGLNKRL-S-NKPTIS 303 (321)
T ss_dssp CSCCSSEEECTTTSCEECS----HHHHHHHHHHHTTSCBCHHHHHHTTGGGCSEEEEESSSSHHHHHHHTT-C-SSCEEE
T ss_pred CCCCCceEEECCCCCccCC----hhhHHHHHHHHHhccCcHHHHHHHHHhcCCEEEEECChHHHHHHHHhC-C-CCceEe
Confidence 4678999999999986532 1125899999999999999999999775 5699999999999999999 4 344444
Q ss_pred eccCCCcchHHHHHHHHHHH
Q psy1120 768 LTQRENANSVLYLLQALGKL 787 (883)
Q Consensus 768 ~~~~~~~~~~~~ll~~l~~L 787 (883)
. ++.++.+.+++.++++
T Consensus 304 ~---~~~~~~~~~~~~l~~~ 320 (321)
T 2h1y_A 304 V---GDNKGLDEAIEFLEEY 320 (321)
T ss_dssp E---SSHHHHHHHHHHHHHH
T ss_pred c---CCHHHHHHHHHHHHhh
Confidence 3 2245677777777765
|
| >3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-60 Score=522.45 Aligned_cols=281 Identities=20% Similarity=0.301 Sum_probs=253.8
Q ss_pred CCCCCEEEEeCCCCchhhHhhHHHhcChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHH
Q psy1120 457 GDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDI 536 (883)
Q Consensus 457 ~~~~~v~fvF~GQGsq~~gMg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~l 536 (883)
.+.+|++|||||||+||+|||++||.+|.||+.+++|++++ |+++.+++++++.+.++++.++||+||++|+|++++
T Consensus 6 ~~~~~~~f~F~GQGsQ~~gMg~~L~~~p~fr~~~~~~~~~l---g~~l~~~~~~~~~~~l~~t~~~Qpai~a~~~al~~~ 82 (318)
T 3ezo_A 6 HHHMKFAFVFPGQGSQSVGMLNAFADVAVVRETLDEASDAL---GQDIGKLIADGPADELNLTTNTQPVMLTAAYACYRA 82 (318)
T ss_dssp ---CCEEEEECCTTCCCTTTTGGGTTCHHHHHHHHHHHHHH---SSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEECCcchhhhhHHHHHhhCHHHHHHHHHHHHHh---CCCHHHHhhCCCHhHhccchhHHHHHHHHHHHHHHH
Confidence 45689999999999999999999998899999999999999 999999998877777899999999999999999999
Q ss_pred HHHc-CCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC-----CCe
Q psy1120 537 LRAL-NITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP-----PEI 608 (883)
Q Consensus 537 l~~~-Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~-----~~v 608 (883)
|+++ ||+|++|+|||+|||+|+|+||+||++|++++++.||++|++. ....|+|++| +++.+++++++. +.|
T Consensus 83 l~~~~Gi~P~~v~GHSlGE~aAa~~AG~ls~edal~lv~~Rg~lm~~~~~~~~G~M~aV~~~~~~~v~~~l~~~~~~~~v 162 (318)
T 3ezo_A 83 WQQAGGAQPSIVAGHSLGEYTALVAAGAIAFRDALPLVRFRAQAMQTAVPVGVGGMAAILGLDDDTVRAVCAEASATGVV 162 (318)
T ss_dssp HHHTTCCCCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHTSSCTTSEEEEEEESCCHHHHHHHHHHHGGGSCE
T ss_pred HHHccCCCCcEEEECCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhcCCCCeE
Confidence 9986 9999999999999999999999999999999999999999876 3456899999 999999999885 369
Q ss_pred EEeeecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhcccccc
Q psy1120 609 EVACHNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKF 687 (883)
Q Consensus 609 ~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 687 (883)
+|||+|+|+|+||||+.++|+++.+.|+++|+ ++++|+| ++|||||+| + ++.+ +|++.+. .+.
T Consensus 163 ~iA~~Nsp~~~VisG~~~~l~~~~~~l~~~g~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~- 226 (318)
T 3ezo_A 163 EAVNFNAPAQVVIAGTKAGIEKACEIAKEKGAKRALPLPV-SAPFHSSLL---K--PASD----KLREYLA-----GVD- 226 (318)
T ss_dssp EEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEECSC-SSCTTSGGG---H--HHHH----HHHHHHT-----TSC-
T ss_pred EEEEEcCCCCEEEeCCHHHHHHHHHHHHhCCCceEEECCC-CCCcChHHH---H--HHHH----HHHHHHh-----cCC-
Confidence 99999999999999999999999999999999 9999999 999999999 7 6666 7888777 443
Q ss_pred CCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC--CEEEEECCCccchHHHHhhcCC
Q psy1120 688 QPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN--AITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 688 ~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~--~~~iEiGP~~~L~~~i~~~l~~ 761 (883)
.+.|++|++|++++..... ....++||++|+++||+|.++++.+.++ .+|||||||++|+++++++++.
T Consensus 227 -~~~p~ipv~S~vtg~~~~~----~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~fvEiGP~~~L~~~~~~~~~~ 297 (318)
T 3ezo_A 227 -VKAPKISVVNNIDVAVVSD----PAAIKDALVRQAAGPVRWVECVQHIAREGVTHVIECGPGKVLAGLTKRIDGN 297 (318)
T ss_dssp -CCCCSSEEBCTTTCCBCCC----HHHHHHHHHHHTTSCBCHHHHHHHHHHTTCCEEEEESSSSHHHHHHHHHCTT
T ss_pred -CCCCCCeEEECCCCcccCC----hhHHHHHHHHHhcccEEHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHHhCC
Confidence 4689999999999876532 1124799999999999999999999987 4799999999999999999853
|
| >3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-60 Score=518.50 Aligned_cols=279 Identities=22% Similarity=0.259 Sum_probs=254.1
Q ss_pred CCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHH
Q psy1120 459 TRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDIL 537 (883)
Q Consensus 459 ~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll 537 (883)
+++++|+|||||+||+|||++||+ +|.||+.+++|++++ |+++.+++++++++.++++.++||+||++|+|++++|
T Consensus 3 ~~~~af~F~GQGsq~~gMg~~L~~~~p~fr~~~~~~~~~l---g~~l~~~~~~~~~~~l~~t~~~qpai~a~~~al~~~l 79 (314)
T 3k89_A 3 ESTLAFVFPGQGSQSLGMLAELSELHPQIRETFAEASEGA---GVDLWALSQGGPEEMLNRTEYTQPALLAAGVAVWRLW 79 (314)
T ss_dssp EEEEEEEECCTTCCCTTTTHHHHHHCTHHHHHHHHHHHHH---TSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCccchhhHHHHHHHcCHHHHHHHHHHHHHh---CCCHHHHHcCCchhhhcccchhhHHHHHHHHHHHHHH
Confidence 468999999999999999999997 899999999999999 9999999987777778999999999999999999999
Q ss_pred HH-cCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC-----CCeE
Q psy1120 538 RA-LNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP-----PEIE 609 (883)
Q Consensus 538 ~~-~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~-----~~v~ 609 (883)
++ |||+|++++|||+|||+|+|+||+||++|++++++.||++|++. ....|+|++| +++.+++++++. +.++
T Consensus 80 ~~~~Gi~P~~v~GhSlGE~aAa~~aG~ls~~da~~lv~~Rg~lm~~~~~~~~g~M~av~~~~~~~~~~~~~~~~~~~~v~ 159 (314)
T 3k89_A 80 TAQRGQRPALLAGHSLGEYTALVAAGVLSLHDGAHLVRLRGQFMQAAAPAGVGAMAAVLGAEDAVVLEVCAEAAGSQVVV 159 (314)
T ss_dssp HHTTCCEEEEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHSCTTSEEEEEEESCCHHHHHHHHHHHCTTSCEE
T ss_pred HHhcCCCCcEEEECCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEEcCCCHHHHHHHHHhcCCCCeEE
Confidence 98 99999999999999999999999999999999999999999876 3467999999 999999998875 3599
Q ss_pred EeeecCCCcEEEecCHHHHHHHHHHHHhCCCe-eEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccC
Q psy1120 610 VACHNSPDSSTISGPEENVKKFVAELQADNIF-ARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQ 688 (883)
Q Consensus 610 iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~-~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 688 (883)
|||+|||+|+||||+.++|+++.+.|+++|++ +++|+| ++|||||+| + ++.+ +|++.+. .+.
T Consensus 160 iA~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~-- 222 (314)
T 3k89_A 160 PANFNSPGQIVIGGDAAAVDRALALLAERGVRKAVKLAV-SVPSHTPLM---R--DAAN----QLGEAMA-----GLS-- 222 (314)
T ss_dssp EEEEEETTEEEEEEEHHHHHHHHHHHHHTTCCCEEECSC-CCCTTSGGG---H--HHHH----HHHHHHH-----TSC--
T ss_pred EEEECCCCCEEEecCHHHHHHHHHHHHhcCCCeEEECCC-CCCCChHHH---H--HHHH----HHHHHHh-----cCC--
Confidence 99999999999999999999999999999996 999999 999999999 7 7766 8888887 444
Q ss_pred CCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC--CEEEEECCCccchHHHHhhcCC
Q psy1120 689 PKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN--AITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 689 ~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~--~~~iEiGP~~~L~~~i~~~l~~ 761 (883)
+++|++|++|++++..... . ...++||++|+++||+|.++++.+.++ .+|||||||++|+++++++++.
T Consensus 223 ~~~p~ip~~S~vtg~~~~~---~-~~~~~~~~~~l~~pV~f~~~i~~l~~~g~~~fvEiGP~~~L~~~~~~~~~~ 293 (314)
T 3k89_A 223 WHAPQIPVVQNVDARVHDG---S-AAIRQALVEQLYLPVQWTGCVQALASQGITRIAECGPGKVLSGLIKRIDKS 293 (314)
T ss_dssp CCCCSSCBEETTTTEECCS---H-HHHHHHHHHHHHSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHCTT
T ss_pred CCCCCceEEECCCCCccCC---h-HHHHHHHHHHhhccEeHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHhhcc
Confidence 4689999999999876532 1 125899999999999999999999987 4799999999999999999853
|
| >3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-60 Score=513.22 Aligned_cols=276 Identities=23% Similarity=0.338 Sum_probs=250.2
Q ss_pred CCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy1120 460 RPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILR 538 (883)
Q Consensus 460 ~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~ 538 (883)
.|++|+|||||+||+|||++||+ +|.||+.+++|++++ |+++.+++ ..+++.++++.++||+||++|+|++++|+
T Consensus 2 ~k~afvF~GQGsq~~gMg~~L~~~~p~fr~~~~~~~~~l---g~~l~~~~-~~~~~~l~~t~~~Qpai~a~~~al~~~l~ 77 (307)
T 3im8_A 2 TKTAFLFAGQGAQYLGMGRDFYDQYPIVKETIDRASQVL---GYDLRYLI-DTEEDKLNQTRYTQPAILATSVAIYRLLQ 77 (307)
T ss_dssp -CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHH---TSCHHHHH-HHCHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcchhHHHHHHHHHhcCHHHHHHHHHHHHHh---CCCHHHHh-CCcHhHhcccchHHHHHHHHHHHHHHHHH
Confidence 37999999999999999999996 899999999999998 99999988 54556689999999999999999999999
Q ss_pred HcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC-----CCeEEe
Q psy1120 539 ALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP-----PEIEVA 611 (883)
Q Consensus 539 ~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~-----~~v~iA 611 (883)
+|||+|++++|||+|||+|+|+||+||++|++++++.||++|++. ....|+|++| +++.+++++++. +.++||
T Consensus 78 ~~Gi~P~~v~GHSlGE~aAa~~aG~ls~~da~~lv~~Rg~lm~~~~~~~~g~M~aV~~~~~~~~~~~~~~~~~~~~v~iA 157 (307)
T 3im8_A 78 EKGYQPDMVAGLSLGEYSALVASGALDFEDAVALVAKRGAYMEEAAPADSGKMVAVLNTPVEVIEEACQKASELGVVTPA 157 (307)
T ss_dssp HTTCCCSEEEESTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHSCTTSSEEEEEESSCHHHHHHHHHHHGGGSCEEEE
T ss_pred HcCCCceEEEccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhcCcCCeEEEE
Confidence 999999999999999999999999999999999999999999876 3467999999 899999988875 349999
Q ss_pred eecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCC
Q psy1120 612 CHNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPK 690 (883)
Q Consensus 612 ~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 690 (883)
|+|||+|+||||+.++|+++.+.|+++|+ ++++|+| ++|||||+| + ++.+ +|++.+. .+. ++
T Consensus 158 ~~Nsp~~~VisG~~~~l~~~~~~l~~~g~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~--~~ 220 (307)
T 3im8_A 158 NYNTPAQIVIAGEVVAVDRAVELLQEAGAKRLIPLKV-SGPFHTSLL---E--PASQ----KLAETLA-----QVS--FS 220 (307)
T ss_dssp EEEETTEEEEEECHHHHHHHHHHHHHHTCCEEEECCS-SSCCSSGGG---H--HHHH----HHHHHHH-----TCC--CC
T ss_pred EEcCCCcEEEEcCHHHHHHHHHHHHhCCCceEEECCC-CCCCChHHH---H--HHHH----HHHHHHh-----cCC--CC
Confidence 99999999999999999999999999998 8999999 999999999 7 7766 8888887 444 46
Q ss_pred CCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcCC
Q psy1120 691 PRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 691 ~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~~ 761 (883)
+|++|++|++++... . .. ..++||++|+++||+|.++++.+.+.+ +|||||||++|+++++++++.
T Consensus 221 ~p~ip~~S~~tg~~~-~--~~--~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~~iEiGP~~~L~~~~~~~~~~ 288 (307)
T 3im8_A 221 DFTCPLVGNTEAAVM-Q--KE--DIAQLLTRQVKEPVRFYESIGVMQEAGISNFIEIGPGKVLSGFVKKIDQT 288 (307)
T ss_dssp CCSSCBBCTTTSSBC-C--GG--GHHHHHHHHTTSCEEHHHHHHHHHHTTCCEEEEESSCSHHHHHHHHHCTT
T ss_pred CCceEEEEcCCCccC-C--hh--HHHHHHHHHhhhheeHHHHHHHHHhCCCCEEEEECCcHHHHHHHHHhcCC
Confidence 899999999998854 1 12 258999999999999999999999874 799999999999999999753
|
| >3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-59 Score=513.76 Aligned_cols=279 Identities=23% Similarity=0.323 Sum_probs=253.5
Q ss_pred CCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHH
Q psy1120 459 TRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDIL 537 (883)
Q Consensus 459 ~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll 537 (883)
++|++|+|||||+||+|||++||+ +|+||+.+++|++++ |+++.+++++++.+.++++.++||+||++|+|++++|
T Consensus 5 ~~~~afvF~GQGsq~~gMg~~L~~~~p~fr~~~~~~~~~l---~~~l~~~~~~~~~~~l~~t~~~Qpai~a~~~al~~~l 81 (316)
T 3tqe_A 5 PQSFAFVFPGQGSQHLGMLAELGLQQPIVLETFQQASSAL---AYDLWALVQHGPQERLDQTQFTQPALLTADVAIFRCW 81 (316)
T ss_dssp CCCCEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHH---TSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchhhHhHHHHHHHcCHHHHHHHHHHHHHh---CcCHHHHHhcCcHhhhcccchHHHHHHHHHHHHHHHH
Confidence 468999999999999999999996 999999999999999 8999999988777778999999999999999999999
Q ss_pred HH-cCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC-----CCeE
Q psy1120 538 RA-LNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP-----PEIE 609 (883)
Q Consensus 538 ~~-~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~-----~~v~ 609 (883)
++ |||+|++++|||+|||+|+|+||+||++|++++++.||++|++. ....|+|++| +++.+++++++. +.++
T Consensus 82 ~~~~gi~P~~v~GHSlGE~aAa~~AG~ls~~da~~lv~~Rg~lm~~~~~~~~g~M~av~~~~~~~~~~~~~~~~~~~~v~ 161 (316)
T 3tqe_A 82 EALGGPKPQVMAGHSLGEYAALVCAGALKFEEAVKLVEKRGQYMQEAVPVGEGAMGAIIGLNEAEIESICENAALGQVVQ 161 (316)
T ss_dssp HHTTCCCCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHSCTTSEEEEEEESSCHHHHHHHHHHHHTTSCEE
T ss_pred HHhcCCCCcEEEECCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhcCCCCceEEEecCCCHHHHHHHHHhcCCCCeEE
Confidence 99 89999999999999999999999999999999999999999875 3467899999 999999998875 3599
Q ss_pred EeeecCCCcEEEecCHHHHHHHHHHHHhCCCe-eEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccC
Q psy1120 610 VACHNSPDSSTISGPEENVKKFVAELQADNIF-ARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQ 688 (883)
Q Consensus 610 iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~-~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 688 (883)
|||+|||+|+||||+.++|+++.+.|+++|++ +++|+| ++|||||+| + ++.+ +|++.+. .+.
T Consensus 162 iA~~Nsp~~~VisG~~~~l~~~~~~l~~~g~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~-- 224 (316)
T 3tqe_A 162 PANLNSTDQTVISGHSEAVDRALNMAKTEGAKIAKRIPV-SVPSHCPLM---Q--PAAD----RLAQDIA-----KIS-- 224 (316)
T ss_dssp EEEEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEECSC-SCCCSSGGG---H--HHHH----HHHHHHT-----TSC--
T ss_pred EEEEcCCCcEEEEecHHHHHHHHHHHHhcCCceEEEccC-CCCCChHHH---H--HHHH----HHHHHHh-----cCC--
Confidence 99999999999999999999999999999995 999999 999999999 7 6666 8888777 443
Q ss_pred CCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC--CEEEEECCCccchHHHHhhcCC
Q psy1120 689 PKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN--AITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 689 ~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~--~~~iEiGP~~~L~~~i~~~l~~ 761 (883)
.+.|++|++|++++..... ....++||++|+++||+|.++++.+.++ .+|||||||++|+++++++++.
T Consensus 225 ~~~p~ip~~S~vtg~~~~~----~~~~~~~~~~~l~~pV~f~~~i~~l~~~g~~~fvEiGP~~~L~~~~~~~~~~ 295 (316)
T 3tqe_A 225 IDSPKVPVIHNVDVVDHNE----ANIIRGALIKQLVRPVRWVETIKYIEEQGIKVFMECGPDNKLAGLIKRIDRQ 295 (316)
T ss_dssp CCCCSSCBCCTTTSSCCCS----HHHHHHHHHHHTTSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHCTT
T ss_pred CCCCCceEEECCCCCcCCC----hhHHHHHHHHHHhcceeHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHhcCC
Confidence 4678999999999876532 1125899999999999999999999887 4799999999999999999853
|
| >3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-59 Score=512.57 Aligned_cols=298 Identities=22% Similarity=0.305 Sum_probs=262.0
Q ss_pred CCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHH
Q psy1120 460 RPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILR 538 (883)
Q Consensus 460 ~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~ 538 (883)
.+++|+|||||+||+|||++||+ +|.||+.+++|++++ |+++.+++++.+.+.++++.++||+||++|+|++++|+
T Consensus 5 ~~~af~F~GQGsq~~gMg~~L~~~~p~fr~~~~~~~~~l---~~~l~~~~~~~~~~~l~~t~~~Qpai~a~q~al~~~l~ 81 (318)
T 3qat_A 5 MGAAFTFPGQGSQLIGMGKVLTEQFVAARMVFEEVDDAL---SEKLSDIIFEGPADVLTLTANAQPALMAVSMAVIRVME 81 (318)
T ss_dssp CEEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHH---TSCHHHHHHHCCHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCcchhHHHHHHHHHHcCHHHHHHHHHHHHHH---CcCHHHHHhcCchhhhcccchhhHHHHHHHHHHHHHHH
Confidence 47999999999999999999996 899999999999999 89999999887777789999999999999999999999
Q ss_pred HcCCC----ccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC-----CC
Q psy1120 539 ALNIT----PDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP-----PE 607 (883)
Q Consensus 539 ~~Gi~----P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~-----~~ 607 (883)
+|||+ |++++|||+|||+|+|+||+||++|++++++.||++|++. ....|+|++| +++.+++++++. +.
T Consensus 82 ~~Gi~p~~~P~~v~GHSlGE~aAa~~aG~ls~~da~~lv~~Rg~lm~~~~~~~~g~M~av~~~~~~~~~~~~~~~~~~~~ 161 (318)
T 3qat_A 82 QLGLNVEKKVKFVAGHSLGEYSALCAAGTFSLTDTARLLRIRGNAMQAAVAVGEGSMAALIGLDEKDVEEICEIVAEEGL 161 (318)
T ss_dssp HTTCCHHHHCSEEEESTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSSCTTSEEEEEEESCCHHHHHHHHHHTTTTCC
T ss_pred HcCCCcCCCCCEEEECCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCHHHHHHHHHhcCcCCc
Confidence 99999 9999999999999999999999999999999999999875 3457899997 999999998874 34
Q ss_pred eEEeeecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccc
Q psy1120 608 IEVACHNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVK 686 (883)
Q Consensus 608 v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 686 (883)
++|||+|||+|+||||+.++|+++.+.|+++|+ ++++|+| ++|||||+| + ++.+ +|++.+. .+.
T Consensus 162 v~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~ 226 (318)
T 3qat_A 162 CQIANDNGGGQIVISGEAKAVETAVEVASQKGAKRAVLLPV-SAPFHSALM---Q--PAAN----AMKNALL-----TVN 226 (318)
T ss_dssp EEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEEETT-SCCTTSGGG---H--HHHH----HHHHHHH-----HSC
T ss_pred EEEEEECCCCCEEEeCCHHHHHHHHHHHHhcCCceEEECCC-CCCCCCHHH---H--HHHH----HHHHHHh-----cCC
Confidence 999999999999999999999999999999999 6999999 999999999 7 7666 8888887 443
Q ss_pred cCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcCCCcc
Q psy1120 687 FQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLPKTVT 764 (883)
Q Consensus 687 ~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~~~~~ 764 (883)
.+.|++|++|++++..... ....++||++|+++||+|.++++.+.+++ +|||||||++|+++++++++. ..
T Consensus 227 --~~~p~ip~~S~vtg~~~~~----~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~fvEiGP~~~L~~~~~~~~~~-~~ 299 (318)
T 3qat_A 227 --KTAPIVPLIANVSVIPESD----PERIVSLLVQQVTGRVRWRETIEWISANGVNTLFEIGSGKVLTGLARRINKD-IK 299 (318)
T ss_dssp --CCCCSSCEECTTTCSEECC----HHHHHHHHHHHHHSCEEHHHHHHHHHHTTEEEEEEESSCSHHHHHHHHHCSS-SE
T ss_pred --CCCCCceEEECCCCCcCCC----hHHHHHHHHHHhhccEeHHHHHHHHHhCCCCEEEEECCchHHHHHHHHhcCC-CC
Confidence 4678999999999886432 11257999999999999999999999885 689999999999999999853 33
Q ss_pred EEeeccCCCcchHHHHHHHHH
Q psy1120 765 NVSLTQRENANSVLYLLQALG 785 (883)
Q Consensus 765 ~~~~~~~~~~~~~~~ll~~l~ 785 (883)
.++. ++.++.+.+++.+|
T Consensus 300 ~~~~---~~~~~~~~~~~~lg 317 (318)
T 3qat_A 300 ALTV---GTAEEIEAALRVLG 317 (318)
T ss_dssp EEEE---CSHHHHHHHHHHHT
T ss_pred eEee---CCHHHHHHHHHHhC
Confidence 3333 22345666666554
|
| >1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-59 Score=505.22 Aligned_cols=276 Identities=21% Similarity=0.309 Sum_probs=251.4
Q ss_pred CEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy1120 461 PLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRA 539 (883)
Q Consensus 461 ~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~ 539 (883)
+++|+|||||+||+|||++||+ +|.||+.+++|++++ |+++.+++++++.+.++++.++||+||++|+|++++|++
T Consensus 3 ~~afvF~GQGsq~~gMg~~L~~~~p~fr~~~~~~~~~l---g~~l~~~~~~~~~~~l~~t~~~qpai~~~~~al~~~l~~ 79 (309)
T 1mla_A 3 QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAAL---GYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQ 79 (309)
T ss_dssp CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHH---TSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCcchhhhHHHHHHcCHHHHHHHHHHHHHh---CCCHHHHHhCCCHhHhcchhhHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999997 899999999999999 999999998776667899999999999999999999999
Q ss_pred c-CCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccc-cccccEEEE-cCCHHHHhhcCC-----CCeEEe
Q psy1120 540 L-NITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETE-FIRGAMAAV-GLGYKDLRSRCP-----PEIEVA 611 (883)
Q Consensus 540 ~-Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~-~~~G~M~av-~~~~~~v~~~l~-----~~v~iA 611 (883)
| ||+|++++|||+|||+|+|+||+||++|++++++.||++|++.. ...|+|++| +++.+++++++. +.++||
T Consensus 80 ~~Gi~P~~v~GhSlGE~aAa~~aG~ls~~dal~lv~~Rg~lm~~~~~~~~g~M~aV~~~~~~~v~~~l~~~~~~~~v~iA 159 (309)
T 1mla_A 80 QGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPV 159 (309)
T ss_dssp TTCCCCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHSCTTSEEEEEEESCCHHHHHHHHHHHCTTSCEEEE
T ss_pred hcCCCCCEEEECCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhcCCCCccEEEEcCCCHHHHHHHHHhcCCCCeEEEE
Confidence 9 99999999999999999999999999999999999999998763 457999996 899999999875 249999
Q ss_pred eecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCC
Q psy1120 612 CHNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPK 690 (883)
Q Consensus 612 ~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 690 (883)
|+|+|+|+||||+.++|+++.+.|+++|+ ++++|+| ++|||||+| + ++.+ +|++.+. .+. .+
T Consensus 160 ~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~--~~ 222 (309)
T 1mla_A 160 NFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPV-SVPSHCALM---K--PAAD----KLAVELA-----KIT--FN 222 (309)
T ss_dssp EEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEECSC-CSCTTSGGG---H--HHHH----HHHHHHH-----TSC--CC
T ss_pred EEcCCCcEEEEccHHHHHHHHHHHHhcCCceEEECCC-CCCcCcHHH---H--HHHH----HHHHHHh-----cCC--CC
Confidence 99999999999999999999999999999 8999999 999999999 7 6666 7888777 444 46
Q ss_pred CCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcC
Q psy1120 691 PRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLP 760 (883)
Q Consensus 691 ~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~ 760 (883)
+|++|++|++++..... ....++||++|+++||+|.++++.+.+.+ +|||||||++|+++++++++
T Consensus 223 ~p~ip~~S~vtg~~~~~----~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~~vEiGP~~~L~~~~~~~~~ 290 (309)
T 1mla_A 223 APTVPVVNNVDVKCETN----GDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVD 290 (309)
T ss_dssp CCSSCBBCTTTCCBCCS----HHHHHHHHHHHHHSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHCT
T ss_pred CCCceEEECCCCCcccC----hHHHHHHHHHHHhccEeHHHHHHHHHhCCCCEEEEECCcHHHHHHHHHhcC
Confidence 89999999999986532 11258999999999999999999998875 69999999999999999974
|
| >2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-58 Score=502.45 Aligned_cols=275 Identities=21% Similarity=0.263 Sum_probs=250.3
Q ss_pred CEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy1120 461 PLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRA 539 (883)
Q Consensus 461 ~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~ 539 (883)
+++|+|||||+||+|||++||+ +|.||+.+++|++++ | ++.+++++++.+.++++.++||+||++|+|++++|++
T Consensus 1 ~~afvF~GQGsq~~gMg~~L~~~~p~fr~~~~~~~~~l---g-~l~~~~~~~~~~~l~~t~~~qpai~~~~~al~~~l~~ 76 (305)
T 2cuy_A 1 MYAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAAL---P-GLLKLMWEGPEEALTLTENQQPALLAAGYAAYRAFLE 76 (305)
T ss_dssp CCEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHS---T-THHHHHHHCCHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCcchhhhHHHHHHhCHHHHHHHHHHHHHH---h-hHHHHHcCCChhhhccchhhhHHHHHHHHHHHHHHHH
Confidence 4799999999999999999997 899999999999998 7 9999988776667899999999999999999999999
Q ss_pred -cCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccc-cccccEEEE-cCCHHHHhhcCCC--CeEEeeec
Q psy1120 540 -LNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETE-FIRGAMAAV-GLGYKDLRSRCPP--EIEVACHN 614 (883)
Q Consensus 540 -~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~-~~~G~M~av-~~~~~~v~~~l~~--~v~iA~~N 614 (883)
|||+|++++|||+|||+|+|+||+||++|++++++.||++|++.. ...|+|++| +++.+++++++.. +++|||+|
T Consensus 77 ~~Gi~P~~v~GHSlGE~aAa~~AG~ls~edal~lv~~Rg~lm~~~~~~~~g~M~aV~~~~~~~v~~~l~~~~~v~iA~~N 156 (305)
T 2cuy_A 77 AGGKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGLEGVEIANLN 156 (305)
T ss_dssp TTCCCCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHTTSCTTSEEEEEEESSCHHHHHHHHTTCSSEEEEEEE
T ss_pred hcCCCCcEEEECCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCccEEEEeCCCHHHHHHHHhhcCCeEEEEEe
Confidence 999999999999999999999999999999999999999998863 457999996 9999999999874 59999999
Q ss_pred CCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCc
Q psy1120 615 SPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRST 694 (883)
Q Consensus 615 sp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 694 (883)
+|+|+||||+.++|+++.+.|+++|+++++|+| ++|||||+| + ++.+ +|++.+. .+. .++|++
T Consensus 157 sp~~~visG~~~~l~~~~~~l~~~g~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~--~~~p~i 219 (305)
T 2cuy_A 157 APEQTVISGRRQAVEEAAERLKERRARVVFLPV-SAPFHSSLM---A--PARK----RLAEDLA-----QVP--LRRPRF 219 (305)
T ss_dssp ETTEEEEEEEHHHHHHHHHHHHHTTCEEEECSC-SSCCSSGGG---H--HHHH----HHHHHHT-----TCC--CCCCSS
T ss_pred cCCcEEEEcCHHHHHHHHHHHHhCCceEEECCC-CCCCChHHH---H--HHHH----HHHHHHh-----cCC--CCCCCe
Confidence 999999999999999999999999999999999 999999999 7 6666 7777777 444 468999
Q ss_pred ceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcC
Q psy1120 695 KWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLP 760 (883)
Q Consensus 695 ~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~ 760 (883)
|++|++++..... ....++||++|+++||+|.++++.+.+.+ +|||||||++|+++++++++
T Consensus 220 p~~S~vtg~~~~~----~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~~vEiGP~~~L~~~~~~~~~ 283 (305)
T 2cuy_A 220 PVYSNVTARPEED----PERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLK 283 (305)
T ss_dssp CEECTTTSSEECC----HHHHHHHHHHGGGSCBCHHHHHHHHHHTTCCEEEEESSCSHHHHHHHHHCS
T ss_pred eEEECCCCCccCC----hhHHHHHHHHHHhhhCcHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHhcC
Confidence 9999999986532 11258999999999999999999998875 69999999999999999974
|
| >2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-59 Score=504.30 Aligned_cols=274 Identities=20% Similarity=0.237 Sum_probs=251.8
Q ss_pred EEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHHc
Q psy1120 462 LWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRAL 540 (883)
Q Consensus 462 v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~~ 540 (883)
++|+|||||+||+|||++||+ +| ||+.+++|++++ |+++.+++++++.+.++++.++||+||++|+|++++|++|
T Consensus 3 ~afvF~GQGsq~~gMg~~L~~~~p-fr~~~~~~~~~l---g~~l~~~~~~~~~~~l~~t~~~Qpai~a~~~al~~~l~~~ 78 (303)
T 2qc3_A 3 IALLAPGQGSQTEGMLSPWLQLPG-AADQIAAWSKAA---DLDLARLGTTASTEEITDTAVAQPLIVAATLLAHQELARR 78 (303)
T ss_dssp EEEEECCTTCCCTTTTTTTTTSTT-HHHHHHHHHHHT---TSCHHHHHHTSCHHHHTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCcchHHHHHHHHhcCc-HHHHHHHHHHHc---CCCHHHHHhcCCHhHhcchhHHHHHHHHHHHHHHHHHHHh
Confidence 799999999999999999997 79 999999999998 9999999987666678999999999999999999999999
Q ss_pred ---CCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC-CCeEEeeec
Q psy1120 541 ---NITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP-PEIEVACHN 614 (883)
Q Consensus 541 ---Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~-~~v~iA~~N 614 (883)
||+|++++|||+|||+|+|+||+||++|++++++.||++|++. ....|+|++| +++.+++++++. ++++|||+|
T Consensus 79 ~~~Gi~P~~v~GhSlGE~aAa~~aG~ls~edal~lv~~Rg~lm~~~~~~~~g~M~aV~~~~~~~v~~~l~~~~v~iA~~N 158 (303)
T 2qc3_A 79 CVLAGKDVIVAGHSVGEIAAYAIAGVIAADDAVALAATRGAEMAKACATEPTGMSAVLGGDETEVLSRLEQLDLVPANRN 158 (303)
T ss_dssp TTTTTCCEEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHTSSCEEEEEEESSCHHHHHHHHHHTTCEEEEEE
T ss_pred hhcCCCccEEEECCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCCHHHHHHHhccCCEEEEEEe
Confidence 9999999999999999999999999999999999999999876 2467999999 899999999887 679999999
Q ss_pred CCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCc
Q psy1120 615 SPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRST 694 (883)
Q Consensus 615 sp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 694 (883)
+|+|+||||+.++|+++.+.|+++| ++++|+| ++|||||+| + ++.+ +|++.+. .+. .++|++
T Consensus 159 sp~~~visG~~~~l~~~~~~l~~~g-~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~--~~~p~i 220 (303)
T 2qc3_A 159 AAGQIVAAGRLTALEKLAEDPPAKA-RVRALGV-AGAFHTEFM---A--PALD----GFAAAAA-----NIA--TADPTA 220 (303)
T ss_dssp ETTEEEEEEEHHHHHHHHHSCCTTC-EEEECSC-SSCTTSGGG---G--GGHH----HHHHHHH-----TSC--CCCCSS
T ss_pred cCCcEEEEcCHHHHHHHHHHHHhCC-CEEECCC-CCCcchHHH---H--HHHH----HHHHHHH-----hCC--CCCCCe
Confidence 9999999999999999999999999 9999999 999999999 7 7777 8888888 444 468899
Q ss_pred ceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcCC
Q psy1120 695 KWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 695 ~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~~ 761 (883)
|++|++++..... .+ ..++||++|+++||+|.++++.+.+++ +|||||||++|+++++++++.
T Consensus 221 p~~S~vtg~~~~~---~~-~~~~~~~~~l~~pV~f~~~i~~l~~~g~~~~vEiGP~~~L~~~~~~~~~~ 285 (303)
T 2qc3_A 221 TLLSNRDGKPVTS---AA-AAMDTLVSQLTQPVRWDLCTATLREHTVTAIVEFPPAGTLSGIAKRELRG 285 (303)
T ss_dssp EEBCTTTSCBCCS---HH-HHHHHHHHGGGSCEEHHHHHHHHHHTTEEEEEECSSCCSHHHHHHHHSTT
T ss_pred EEEECCCCCccCC---ch-HHHHHHHHHHhccEeHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHhcCC
Confidence 9999999987532 11 248999999999999999999999886 789999999999999999853
|
| >1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-59 Score=508.43 Aligned_cols=295 Identities=19% Similarity=0.229 Sum_probs=257.8
Q ss_pred EEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHH-
Q psy1120 462 LWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRA- 539 (883)
Q Consensus 462 v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~- 539 (883)
++|+|||||+||+|||++||+ +| ||+.+++|++++ |+++.+++++++.+.++++.++||+||++|+|++++|++
T Consensus 3 ~afvF~GQGsq~~gMg~~L~~~~p-fr~~~~~~~~~l---g~~l~~~l~~~~~~~l~~t~~~qpai~a~~~al~~~l~~~ 78 (317)
T 1nm2_A 3 LVLVAPGQGAQTPGFLTDWLALPG-AADRVAAWSDAI---GLDLAHFGTKADADEIRDTSVAQPLLVAAGILSAAALGTQ 78 (317)
T ss_dssp EEEEECCTTCCCTTTTHHHHTSTT-HHHHHHHHHHHH---TSCHHHHHHTCCHHHHTCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EEEEECCCCCchhhHHHHHHhcCc-HHHHHHHHHHHc---CCCHHHHHhcCChhhhcchhHHHHHHHHHHHHHHHHHHhc
Confidence 799999999999999999997 79 999999999998 999999998766667899999999999999999999999
Q ss_pred ----cC----CCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCC-CCe
Q psy1120 540 ----LN----ITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCP-PEI 608 (883)
Q Consensus 540 ----~G----i~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~-~~v 608 (883)
|| |+|++++|||+|||+|+|+||+||++|++++++.||++|++. ....|+|++| +++.+++++++. +++
T Consensus 79 ~~~~~G~~~~i~P~~v~GhSlGE~aAa~~AG~ls~~dal~lv~~Rg~lm~~~~~~~~G~M~aV~g~~~~~v~~~~~~~~v 158 (317)
T 1nm2_A 79 TSVADATGPGFTPGAVAGHSVGEITAAVFAGVLDDTAALSLVRRRGLAMAEAAAVTETGMSALLGGDPEVSVAHLERLGL 158 (317)
T ss_dssp ---------CCCCSEEEESTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTSCEEEEEEEESCHHHHHHHHHHTTC
T ss_pred cchhcCCcCcccccEEEEcCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCCHHHHHHHhccCCE
Confidence 99 999999999999999999999999999999999999999876 2467999999 899999999987 679
Q ss_pred EEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccC
Q psy1120 609 EVACHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQ 688 (883)
Q Consensus 609 ~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 688 (883)
+|||+|+|+|+||||+.++|+++.+.|+++|+++++|+| ++|||||+| + ++.+ +|++.+. .+.
T Consensus 159 ~iA~~Nsp~~~VisG~~~~l~~~~~~l~~~g~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~-- 221 (317)
T 1nm2_A 159 TPANVNGAGQIVAAGTMEQLAALNEDKPEGVRKVVPLKV-AGAFHTRHM---A--PAVD----KLAEAAK-----ALT-- 221 (317)
T ss_dssp EEEEEEETTEEEEEEEHHHHHHHHHSCCTTEEEEEECSC-SSCTTSGGG---H--HHHH----HHHHHHT-----TCC--
T ss_pred EEEEEecCCcEEEEcCHHHHHHHHHHHHHCCCeEEECCC-CCCcChHHH---H--HHHH----HHHHHHH-----hCC--
Confidence 999999999999999999999999999999999999999 999999999 7 6666 7877777 444
Q ss_pred CCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcCCCccEE
Q psy1120 689 PKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLPKTVTNV 766 (883)
Q Consensus 689 ~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~~~~~~~ 766 (883)
+++|++|++|++++...... + ..++||++|+++||+|.++++.+.+.+ +|||||||++|+++++++++. ...+
T Consensus 222 ~~~p~ipv~S~vtg~~~~~~---~-~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~~vEiGP~~~L~~~~~~~~~~-~~~~ 296 (317)
T 1nm2_A 222 PADPKVTYVSNKDGRAVASG---T-EVLDRLVGQVANPVRWDLCMETFKELGVTAIIEVCPGGTLTGLAKRALPG-VKTL 296 (317)
T ss_dssp CCCCSSEEBCTTTSCBCCCH---H-HHHHHHHHHTTSCEEHHHHHHHHHHTTCCEEEECSSCSHHHHHHHHHSTT-CEEE
T ss_pred CCCCCceEEECCCCccccCc---h-hHHHHHHHHhhCcEeHHHHHHHHHhCCCCEEEEECChHHHHHHHHHhcCC-CCEE
Confidence 46899999999999875321 1 248999999999999999999998875 899999999999999999853 3333
Q ss_pred eeccCCCcchHHHHHHHHH
Q psy1120 767 SLTQRENANSVLYLLQALG 785 (883)
Q Consensus 767 ~~~~~~~~~~~~~ll~~l~ 785 (883)
+.. +.++.+.+.+.+.
T Consensus 297 ~~~---~~~~~~~~~~~l~ 312 (317)
T 1nm2_A 297 ALK---TPDDLDAARELVA 312 (317)
T ss_dssp ECC---SGGGHHHHHHHHH
T ss_pred ecC---CHHHHHHHHHHHH
Confidence 332 2345655443333
|
| >3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-58 Score=501.55 Aligned_cols=278 Identities=19% Similarity=0.278 Sum_probs=253.1
Q ss_pred CCCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHH
Q psy1120 458 DTRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDI 536 (883)
Q Consensus 458 ~~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~l 536 (883)
+.++++|+|||||+||+|||++||+ +|.||+.+++|++++ |+++.++++.++.+.++++.++||+||++|+|++++
T Consensus 8 ~~~~vafvF~GQGsq~~gMg~~L~~~~p~~r~~~~~~~~~l---g~~l~~~l~~~~~~~l~~~~~~qpai~~~~~al~~~ 84 (316)
T 3im9_A 8 RGSHMAIIFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTL---DFDILETMFTDEEGKLGETENTQPALLTHSSALLAA 84 (316)
T ss_dssp SCCEEEEEECCTTCCCTTTTTTTTTTCHHHHHHHHHHHHHC---SSCHHHHHHTCTTSCTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHcCHHHHHHHHHHHHHc---CCCHHHHHhcCCHhHhccccchhHHHHHHHHHHHHH
Confidence 4568999999999999999999996 899999999999998 999999998777778999999999999999999999
Q ss_pred HHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEE-cCCHHHHhhcCCC------Ce
Q psy1120 537 LRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAV-GLGYKDLRSRCPP------EI 608 (883)
Q Consensus 537 l~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av-~~~~~~v~~~l~~------~v 608 (883)
|++ ++|++++|||+|||+|+|+||+||++|++++++.||++|++. ....|+|++| +++.+++++++.. .+
T Consensus 85 l~~--i~P~~v~GHSlGE~aAa~~aG~ls~~da~~lv~~Rg~lm~~~~~~~~g~M~av~~~~~~~v~~~~~~~~~~~~~v 162 (316)
T 3im9_A 85 LKN--LNPDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKII 162 (316)
T ss_dssp CSS--CCCSEEEESTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSSCTTSEEEEEEESCCHHHHHHHHHHHCBTTBCE
T ss_pred HHh--CCCCEEEECCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCCCHHHHHHHHHHhcccCCeE
Confidence 998 999999999999999999999999999999999999999876 3457899999 9999999988742 49
Q ss_pred EEeeecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhcccccc
Q psy1120 609 EVACHNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKF 687 (883)
Q Consensus 609 ~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 687 (883)
+|||+|+|+|+||||+.++|+++.+.|+++|+ ++++|+| ++|||||+| + ++.+ +|++.+. .+.
T Consensus 163 ~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~- 226 (316)
T 3im9_A 163 EPANINCPGQIVVSGHKALIDELVEKGKSLGAKRVMPLAV-SGPFHSSLM---K--VIEE----DFSSYIN-----QFE- 226 (316)
T ss_dssp EEEEEEETTEEEEEEEHHHHHHHHHHTTTTTCSEEEECCC-SSCTTSGGG---G--GGHH----HHHHHHT-----TSC-
T ss_pred EEEEEcCCCCEEEEcCHHHHHHHHHHHHhCCCceEEECCC-CCCcchHHH---H--HHHH----HHHHHHh-----hCC-
Confidence 99999999999999999999999999999999 8999999 999999999 7 7777 8888888 443
Q ss_pred CCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcCC
Q psy1120 688 QPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 688 ~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~~ 761 (883)
.+.|++|++|++++..... ....++||++|+++||+|.++++.+.+.+ +|||||||++|+++++++++.
T Consensus 227 -~~~p~ip~~S~vtg~~~~~----~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~~vEiGP~~~L~~~~~~~~~~ 297 (316)
T 3im9_A 227 -WRDAKFPVVQNVNAQGETD----KEVIKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRD 297 (316)
T ss_dssp -CCCCSSCEECTTTCSEECC----HHHHHHHHHHHTTSCEEHHHHHHHHHHTTEEEEEEESSSCHHHHHHHHHCSS
T ss_pred -CCCCCceEEEcCCCcccCC----hhHHHHHHHHHhhccEeHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHhCC
Confidence 4678999999999876532 11248999999999999999999999886 689999999999999999853
|
| >3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-57 Score=483.93 Aligned_cols=268 Identities=21% Similarity=0.308 Sum_probs=239.8
Q ss_pred EEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHH-HHHHHHHH
Q psy1120 462 LWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQI-GLVDILRA 539 (883)
Q Consensus 462 v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qi-al~~ll~~ 539 (883)
++|||||||+||+|||++||+ +|. .+++|++++ |+++.+++.+++.+.++++.++||+||++|+ ++.++|++
T Consensus 2 ~afvF~GQGsq~~gMg~~L~~~~~~---~~~~~d~~l---g~~l~~~~~~~~~~~l~~t~~~Qpal~~~~~~~~~~~~~~ 75 (281)
T 3sbm_A 2 KAYMFPGQGSQAKGMGRALFDAFPA---LTARADGVL---GYSIRALCQDDPDQRLSQTQFTQPALYVVNALSYLKRREE 75 (281)
T ss_dssp EEEEECCTTCCCTTTTHHHHHHSHH---HHHHHHHHH---TSCHHHHHHTCTTSCTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchhhHhHHHHHHHhCHH---HHHHHHhhc---CCCHHHHHhCCchhhhccchhhhHHHHHHHHHHHHHHHHh
Confidence 689999999999999999996 665 456777777 9999999988777789999999999999995 67889999
Q ss_pred cCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEE-cCCHHHHhhcCC----CCeEEeeec
Q psy1120 540 LNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAV-GLGYKDLRSRCP----PEIEVACHN 614 (883)
Q Consensus 540 ~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av-~~~~~~v~~~l~----~~v~iA~~N 614 (883)
|| +|++++|||+|||+|+|+||+||++|++++++.||++|++. ..|+|++| +++.+++++++. ++++|||+|
T Consensus 76 ~g-~P~~v~GHSlGE~aAa~~aG~ls~eda~~lv~~Rg~lm~~~--~~g~M~av~~~~~~~v~~~l~~~~~~~v~iA~~N 152 (281)
T 3sbm_A 76 EA-PPDFLAGHSLGEFSALFAAGVFDFETGLALVKKRGELMGDA--RGGGMAAVIGLDEERVRELLDQNGATAVDIANLN 152 (281)
T ss_dssp SC-CCSEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHC--CBCEEEEEESCCHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CC-CCcEEEEcCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhC--CcCCeEEEeCCCHHHHHHHHHHcCCCCEEEEEEc
Confidence 99 99999999999999999999999999999999999999874 47899998 999999999875 469999999
Q ss_pred CCCcEEEecCHHHHHHHHHHHHh-CCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCC
Q psy1120 615 SPDSSTISGPEENVKKFVAELQA-DNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRS 693 (883)
Q Consensus 615 sp~~~visG~~~~l~~l~~~l~~-~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 693 (883)
+|+|+||||+.++|+++.+.|++ .++++++|+| ++|||||+| + ++.+ +|++.+. .+. +++|+
T Consensus 153 sp~~~visG~~~al~~~~~~l~~~~~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~l~-----~~~--~~~p~ 215 (281)
T 3sbm_A 153 SPSQVVISGAKDEIARLQVPFEAAGAKKYTVLRV-SAAFHSRFM---R--PAMV----EFGRFLE-----GYD--FAPPK 215 (281)
T ss_dssp ETTEEEEEECHHHHHHTHHHHHHHTCSEEEECCC-SBCTTSGGG---H--HHHH----HHHHHHT-----TCC--CCCCS
T ss_pred CccCEEEeCCHHHHHHHHHHHHhcCCceEEECCC-CCCcchHHH---H--HHHH----HHHHHHh-----cCC--CCCCC
Confidence 99999999999999999999999 7889999999 999999999 7 6666 7888777 444 47899
Q ss_pred cceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC--CEEEEECCCccchHHHHhhcC
Q psy1120 694 TKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN--AITLEIAPHGLLQAILRRSLP 760 (883)
Q Consensus 694 ~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~--~~~iEiGP~~~L~~~i~~~l~ 760 (883)
+|++|++++..... .. ..+||++|+++||+|.++++.+.++ .+|||||||++|+++++++++
T Consensus 216 ip~~S~vtg~~~~~---~~--~~~~~~~~l~~pV~f~~~i~~l~~~g~~~fvEiGP~~~L~~~~~~i~~ 279 (281)
T 3sbm_A 216 IPVISNVTARPCKA---DG--IRAALSEQIASPVRWCESIRYLMGRGVEEFVECGHGIVLTGLYAQIRR 279 (281)
T ss_dssp SCEECTTTSSBCCG---GG--HHHHHHHGGGSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHHH
T ss_pred CeEEECCCCCCCCh---HH--HHHHHHHHccccEeHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHhcC
Confidence 99999999986521 22 4689999999999999999999887 479999999999999999863
|
| >3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-57 Score=504.32 Aligned_cols=274 Identities=21% Similarity=0.292 Sum_probs=246.0
Q ss_pred CCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHH-HHHHHH
Q psy1120 459 TRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQ-IGLVDI 536 (883)
Q Consensus 459 ~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~q-ial~~l 536 (883)
.++++|||||||+||+|||++||+ +| +.+++|++++ |+++.+++++++.+.++++.++||+||++| ++++++
T Consensus 4 ~~~~afvFpGQGsQ~~gMg~~L~~~~~---~~~~~~d~~l---g~~l~~l~~~~~~~~l~~t~~~QPalfav~~lal~~l 77 (394)
T 3g87_A 4 SMLNTFMFPGQGSQAKGMGGALFDRFA---DLTAQADAVL---GYSIRALCVDDPRDELGRTQFTQPALYVVNALTYYAK 77 (394)
T ss_dssp CCEEEEEECCTTCCCTTCSTTHHHHTH---HHHHHHHHHH---SSCHHHHHHTCTTCCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCcchhhHhHHHHHHHHCH---HHHHHHHHHh---CCCHHHHhccCchhhhccchHHHHHHHHHHHHHHHHH
Confidence 457999999999999999999996 55 4567788888 999999998877778999999999999999 799999
Q ss_pred HHHcCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEE-cCCHHHHhhcCC----CCeEEe
Q psy1120 537 LRALNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAV-GLGYKDLRSRCP----PEIEVA 611 (883)
Q Consensus 537 l~~~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av-~~~~~~v~~~l~----~~v~iA 611 (883)
|++|||+|++|+|||+|||+|+|+||+||++|++++++.||++|++. ..|+|++| +++.++++++|. ++++||
T Consensus 78 l~~~Gi~P~av~GHSlGE~aAa~aAG~ls~edal~lv~~Rg~lm~~~--~~G~M~AV~~~~~~~v~~~l~~~~~~~v~IA 155 (394)
T 3g87_A 78 CEDSGETPDFLAGHSLGEFNALLAAGCFDFETGLKLVARRAELMSQA--RDGAMAAIVNASREQIERTLDEHGLVDTAIA 155 (394)
T ss_dssp HHHHCCCCSEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHC--CSEEEEEEESCCHHHHHHHHHHTTCTTCEEE
T ss_pred HHHcCCCCceeeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhc--CCCceEEEECCCHHHHHHHHHhcCCCcEEEE
Confidence 99999999999999999999999999999999999999999999875 46999999 999999999885 469999
Q ss_pred eecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCC
Q psy1120 612 CHNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKP 691 (883)
Q Consensus 612 ~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 691 (883)
|+|+|+|+||||+.++|+++.+.|+++|+++++|+| ++|||||+| + ++.+ +|++.+. .+. .++
T Consensus 156 ~~Nsp~~~ViSG~~~al~~l~~~l~~~g~~~~~L~V-~~afHS~~m---~--~~~~----~~~~~l~-----~~~--~~~ 218 (394)
T 3g87_A 156 NDNTPSQLVISGPAHEIARAEALFQHDRVRYLRLNT-SGAFHSKFM---R--PAQQ----AFAAHLQ-----SFR--LAD 218 (394)
T ss_dssp EEEETTEEEEEEEHHHHHHHGGGSCSSSCEEEECSC-SSCTTSGGG---H--HHHH----HHHHHHT-----TSC--CCC
T ss_pred EEcCCCceEecCCHHHHHHHHHHHHhCCCeEEECCC-CCCcCChhh---h--hhHH----HHHHHHh-----cCC--CCC
Confidence 999999999999999999999999999999999999 999999999 7 6666 7887777 443 468
Q ss_pred CCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC-------CEEEEECCCccchHHHHhhcCCC
Q psy1120 692 RSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN-------AITLEIAPHGLLQAILRRSLPKT 762 (883)
Q Consensus 692 ~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~-------~~~iEiGP~~~L~~~i~~~l~~~ 762 (883)
|.+|++|++++..... . ...+||++|+++||+|.++++.|.+. .+|||||||++|++++++++...
T Consensus 219 p~ipv~S~vtg~~~~~---~--~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~~~~~fvEiGP~~~L~~li~~il~~~ 291 (394)
T 3g87_A 219 PAIPVISNVSARPYEN---G--RVSEGLAQQIASPVRWCESIRYLLALAAERGEAIEFTELGHGDVLTRLVHTIRRQT 291 (394)
T ss_dssp CSSCEECTTTSSBCCT---T--CHHHHHHHGGGSCBCHHHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHSS
T ss_pred CCceEEECCCCcCCCc---h--HHHHHHHHHHhCceeHHHHHHHHHhcCCCcCCCCEEEEeCCcHHHHHHHHHHhccC
Confidence 9999999999986421 1 24799999999999999999999864 56999999999999999998543
|
| >2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-56 Score=491.75 Aligned_cols=280 Identities=24% Similarity=0.266 Sum_probs=246.9
Q ss_pred CCCCCEEEEeCCCCchhhHhhHHHhcChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHH
Q psy1120 457 GDTRPLWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDI 536 (883)
Q Consensus 457 ~~~~~v~fvF~GQGsq~~gMg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~l 536 (883)
...++++|||||||+||+|||++||++|.||+.+++|++++ |+++.+++++++.+.++++.++||+||++|+|++++
T Consensus 22 ~~~~~~afvF~GQGsQ~~gMg~~L~~~p~fr~~~~~~~~~l---g~~l~~~~~~~~~~~l~~t~~aQpai~a~~~A~~~~ 98 (339)
T 2c2n_A 22 SMGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVL---GYDLLELSLHGPQETLDRTVHCQPAIFVASLAAVEK 98 (339)
T ss_dssp -CCCCEEEEECCTTCCCTTTTTTTTTSTTHHHHHHHHHHHH---SSCHHHHHHHCCHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHhChHHHHHHHHHHHHh---CCCHHHHHhcCCHhhhcchHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999998 999999988766667899999999999999999999
Q ss_pred HHHcC---C-CccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhccc-ccccccEEEEcCCHH-HHhhcC------
Q psy1120 537 LRALN---I-TPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVET-EFIRGAMAAVGLGYK-DLRSRC------ 604 (883)
Q Consensus 537 l~~~G---i-~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~-~~~~G~M~av~~~~~-~v~~~l------ 604 (883)
|+.++ | +|++++|||+|||+|+|+||+||++||+++++.||++|++. ....|+|++|..+.+ .+++++
T Consensus 99 l~~~~p~~v~~p~~v~GHSlGE~aAa~~AG~ls~edal~lv~~Rg~lm~~~~~~~~g~M~aV~~~~~~~~~~~~~~~~~~ 178 (339)
T 2c2n_A 99 LHHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIRAEAMQEASEAVPSGMLSVLGQPQSKFNFACLEAREH 178 (339)
T ss_dssp HHHHCHHHHHTEEEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTSCEEEEEEECCTTCCHHHHHHHHHHH
T ss_pred HhccCCccccCCceeccCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHhccCCCCcEEEEeCCcHHHHHHHHHHHHHh
Confidence 99876 5 88999999999999999999999999999999999999875 245799999966543 233221
Q ss_pred -------CCCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHH
Q psy1120 605 -------PPEIEVACHNSPDSSTISGPEENVKKFVAELQADNI-FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRAC 676 (883)
Q Consensus 605 -------~~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~ 676 (883)
.+.++|||+|+|+++||||+.++|+++.+.|+++|+ ++++|+| ++|||||+| + ++.+ +|++.
T Consensus 179 ~~~~~~~~~~v~iA~~Nsp~~~VisG~~~~l~~l~~~l~~~g~~~~~~L~v-~~afHS~~m---~--~~~~----~~~~~ 248 (339)
T 2c2n_A 179 CKSLGIENPVCEVSNYLFPDCRVISGHQEALRFLQKNSSKFHFRRTRMLPV-SGAFHTRLM---E--PAVE----PLTQA 248 (339)
T ss_dssp HHHTTCSSCCEEEEEEEETTEEEEEEEHHHHHHHHHTGGGGTCCEEEECSC-SSCTTSGGG---G--GGHH----HHHHH
T ss_pred hhhccCCCCeEEEEEEcCCCCEEEECCHHHHHHHHHHHHhcCCceEEECCC-CCCcchHHH---H--HHHH----HHHHH
Confidence 246999999999999999999999999999999998 8999999 999999999 7 7777 88888
Q ss_pred HHhhhccccccCCCCCCcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcC------CEEEEECCCcc
Q psy1120 677 MKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKN------AITLEIAPHGL 750 (883)
Q Consensus 677 l~~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~------~~~iEiGP~~~ 750 (883)
+. .+. ++.|++|++|++++..... ....++||++|+++||+|.++++.+.++ .+|||||||++
T Consensus 249 l~-----~~~--~~~p~ip~~S~vtg~~~~~----~~~~~~y~~~~l~~pV~f~~av~~l~~~g~~~~~~~~vEiGP~~~ 317 (339)
T 2c2n_A 249 LK-----AVD--IKKPLVSVYSNVHGHRYRH----PGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQ 317 (339)
T ss_dssp HH-----TCC--CCCCSSEEECTTTSSBCCC----GGGHHHHHHHHTTSCEEHHHHHHHHTCCCTTCCCCEEEEESSSSH
T ss_pred Hh-----cCC--CCCCCceEEECCCCCCCCC----hhhHHHHHHHHhhcceeHHHHHHHHHhcCCCCCCCEEEEECCcHH
Confidence 88 443 4688999999999987532 1235899999999999999999999875 47999999999
Q ss_pred chHHHHhhcC
Q psy1120 751 LQAILRRSLP 760 (883)
Q Consensus 751 L~~~i~~~l~ 760 (883)
|+++++++++
T Consensus 318 L~~l~~~~~~ 327 (339)
T 2c2n_A 318 LGAILKSCNM 327 (339)
T ss_dssp HHHHHHHHCH
T ss_pred HHHHHHHhhh
Confidence 9999999874
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-57 Score=553.07 Aligned_cols=341 Identities=21% Similarity=0.283 Sum_probs=296.2
Q ss_pred CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHHHHHHHHHHHHHHHCC
Q psy1120 48 TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAG 127 (883)
Q Consensus 48 ~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~rl~l~aa~eALedAG 127 (883)
.++++||++|.+|++.+.+...++.. ...|+++ +.||+.||||++++++.|||+++|++++++|||+|||
T Consensus 959 ~~~eefW~~L~~G~~~i~p~~~~~~~--------~vaG~Ip--~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedAG 1028 (1688)
T 2pff_A 959 PETGEYSVKLLKGATLYIPKALRFDR--------LVAGQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASG 1028 (1688)
T ss_dssp CCCCSSSCCCCCCTTCCCCCCCCEEC--------CSSCSCC--CCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTTT
T ss_pred CCHHHHHHHHHcCCCEEecCCCCCCc--------eEEEEEC--CCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHcC
Confidence 46789999999999999875433322 3345554 4799999999999999999999999999999999999
Q ss_pred CC-CCC----CCCCceEEEEccCCCchhhhhh--hh---hhccCCccccccchhhHHHHHHH-hhCCCCceeeecccchh
Q psy1120 128 IN-PKS----LRGSKTGVFIGACFSESEKTWF--YE---KLQINGFGITGCSRAMLANRVSY-WLGVNGPSYTVDSACSS 196 (883)
Q Consensus 128 ~~-~~~----~~~~~~gv~~g~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~a~~is~-~~~l~Gps~tv~tacsS 196 (883)
|+ +.+ ++++++|||+|++.+++..... .+ ...+.++.++++..|.+++++++ .||++||+++|++||||
T Consensus 1029 I~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACAS 1108 (1688)
T 2pff_A 1029 ITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACAT 1108 (1688)
T ss_dssp CSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTT
T ss_pred CCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEecCCCch
Confidence 98 665 7889999999998887543221 11 12355666777888999999999 79999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----------CCCCCCCcccCCCCcccccceEEEE
Q psy1120 197 SLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----------PDGRCKSFDEAANGYCRSEAVCIMY 265 (883)
Q Consensus 197 sl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----------~~g~~~pfd~~~~G~~~gEGa~~vv 265 (883)
|++||++||++|++|+||+|||||+|. +++..+..|..+++++ |++.|||||.+++||++|||||++|
T Consensus 1109 SL~AL~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAGavV 1187 (1688)
T 2pff_A 1109 SVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQI 1187 (1688)
T ss_dssp THHHHHHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCSCCEEEE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccccceEEEE
Confidence 999999999999999999999999998 5777888899999998 6799999999999999999999999
Q ss_pred Eccccccc----ceeEEEEeeeeccCCCCCCCCCC------------------CCHH-----------------------
Q psy1120 266 LQKSKDAK----RVYARVVHAKTNCDGYKEQGITY------------------PSGA----------------------- 300 (883)
Q Consensus 266 L~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~------------------p~~~----------------------- 300 (883)
|+++++|+ +||++|+|+++++|+.+. ++++ |++.
T Consensus 1188 Lesle~Al~~G~~IyAvI~GsavnsDg~~~-SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~ 1266 (1688)
T 2pff_A 1188 IMQADLALKMGVPIYGIVAMAATATDKIGR-SVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVEN 1266 (1688)
T ss_dssp EECSHHHHSSSCCCCCEECCCCCCCCCCCS-SSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHH
T ss_pred eCcHHHHHHCCCceEEEEEEEEEECCCCcc-CCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHHHHHHHHh
Confidence 99999986 599999999999998632 2222 3321
Q ss_pred --------------------HH-------------------------------HHHHHHHHHHcCCCCCCccEEEEecCC
Q psy1120 301 --------------------LQ-------------------------------QRLLEDFYSECEVDPKNLAWIEAHGTG 329 (883)
Q Consensus 301 --------------------~~-------------------------------~~~i~~al~~agl~~~dI~~ve~hgtg 329 (883)
+| .++|++||+++|++|+||||||+||||
T Consensus 1267 e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTG 1346 (1688)
T 2pff_A 1267 ELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTS 1346 (1688)
T ss_dssp HHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCS
T ss_pred hHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCC
Confidence 34 478999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhCC-CC--CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 330 TKVGDPEEVQALENVFCP-GR--TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 330 t~~gD~~E~~Ai~~~f~~-~~--~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
|++||++|+++|.++|+. .+ ..+++|+|+|+++||++||||+++++|++++|++|+||||+|+++|||.++
T Consensus 1347 T~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~ 1420 (1688)
T 2pff_A 1347 TKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILE 1420 (1688)
T ss_dssp CSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCC
T ss_pred CccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Confidence 999999999999999964 22 357999999999999999999999999999999999999999999999996
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=563.73 Aligned_cols=349 Identities=21% Similarity=0.289 Sum_probs=304.8
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+|+ | ..++++||++|.+|++.+.+...++. ....|+++ +.||+.||||++++++.|||++
T Consensus 1125 ~~~~i~------~-~~~~~~~w~~L~~G~~~i~p~~~~~~--------~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~ 1187 (1878)
T 2uv9_A 1125 DKVEIF------E-IPETGQYTVRLRKGATLLIPKALQFD--------RLVAGQIP--TGWDARRYGVPEDIIQQVDPVT 1187 (1878)
T ss_dssp GGEEEE------E-CTTTSCEEEEECTTCEEEEEEEECCS--------CCEEEECC--TTCCHHHHTCCHHHHHHSCHHH
T ss_pred CCeeEe------e-CCChHHHHHHHHcCCCeeeecCCCCc--------ceEEEEeC--CCCCHhhcCCCHHHHHhcCHHH
Confidence 456665 3 46678999999999999987433222 13345554 4799999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCC-CCC----CCCCceEEEEccCCCchhhhhh--h---hhhccCCccccccchhhHHHHHHH-hh
Q psy1120 113 RIILEKTYEAVIDAGIN-PKS----LRGSKTGVFIGACFSESEKTWF--Y---EKLQINGFGITGCSRAMLANRVSY-WL 181 (883)
Q Consensus 113 rl~l~aa~eALedAG~~-~~~----~~~~~~gv~~g~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~a~~is~-~~ 181 (883)
+++|++++|||+||||+ +.+ ++++++|||+|++.+++..... . ....+.++.++++..|+++++|++ .|
T Consensus 1188 ~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~l 1267 (1878)
T 2uv9_A 1188 LYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLLL 1267 (1878)
T ss_dssp HHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHhc
Confidence 99999999999999998 666 7889999999999888643221 1 112356777888999999999999 59
Q ss_pred CCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----------CCCCCCCccc
Q psy1120 182 GVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----------PDGRCKSFDE 250 (883)
Q Consensus 182 ~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----------~~g~~~pfd~ 250 (883)
|++||++++++|||||++||++||++|++|+||+|||||+|. +++..+..|..+++++ |++.|||||.
T Consensus 1268 g~~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~ 1346 (1878)
T 2uv9_A 1268 SSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTST 1346 (1878)
T ss_dssp CCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBT
T ss_pred CCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCcc
Confidence 999999999999999999999999999999999999999999 7888999999999998 7899999999
Q ss_pred CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC----------------CH-----------
Q psy1120 251 AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP----------------SG----------- 299 (883)
Q Consensus 251 ~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p----------------~~----------- 299 (883)
+++||++|||||++||+++++|+ +||++|+|+++++|+.+ .++++| ++
T Consensus 1347 ~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~-~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~ 1425 (1878)
T 2uv9_A 1347 TRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIG-RSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQL 1425 (1878)
T ss_dssp TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSC-SCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHH
T ss_pred CCCCCcccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCc-cCCCCCCcchhhhhhhccccCCCcccchHHHHHHH
Confidence 99999999999999999999996 69999999999999964 345555 21
Q ss_pred ----------------------------------------HHHH-------------------------------HHHHH
Q psy1120 300 ----------------------------------------ALQQ-------------------------------RLLED 308 (883)
Q Consensus 300 ----------------------------------------~~~~-------------------------------~~i~~ 308 (883)
.+|. .+|++
T Consensus 1426 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ 1505 (1878)
T 2uv9_A 1426 ELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRG 1505 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHH
T ss_pred HHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHH
Confidence 2344 89999
Q ss_pred HHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCC---CCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCC
Q psy1120 309 FYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCP---GRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGI 385 (883)
Q Consensus 309 al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~---~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ 385 (883)
||+++|++++||||||+|||||++||++|+++|.++|+. ....+++|+|+|+|+||++||||+++++|++++|++|+
T Consensus 1506 ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~ 1585 (1878)
T 2uv9_A 1506 ALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGI 1585 (1878)
T ss_dssp HHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCE
T ss_pred HHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999963 23468999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q psy1120 386 IPPNINFKSPRKDIP 400 (883)
Q Consensus 386 ipp~~~~~~~~~~~~ 400 (883)
||||+|+++|||.++
T Consensus 1586 iPp~~n~d~~dp~i~ 1600 (1878)
T 2uv9_A 1586 VPGNRNADNVDKVME 1600 (1878)
T ss_dssp ECCCTTCCSBCGGGG
T ss_pred CCCCCCCCCCCCccc
Confidence 999999999999985
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-56 Score=564.73 Aligned_cols=349 Identities=20% Similarity=0.279 Sum_probs=301.9
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|+|++ ..++++||++|.+|++.+.+...+|. ....|+++ +.||+.||||++++++.|||++
T Consensus 1150 ~~~~I~~-------~~~~~~~w~~L~~G~~~i~p~~~~~~--------~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~ 1212 (1887)
T 2uv8_A 1150 DKVDIFE-------IPETGEYSVKLLKGATLYIPKALRFD--------RLVAGQIP--TGWNAKTYGISDDIISQVDPIT 1212 (1887)
T ss_dssp GGEEEEE-------CTTTSCEEEEECTTCEEEEEEEECCS--------CCEEECCC--TTCCTTTTTCCHHHHHHSCHHH
T ss_pred CceeEee-------cCchHHHHHHHHcCCceeecccCCCC--------ccEEEEEC--CCCChhhcCCCHHHHHhcCHHH
Confidence 4566664 35678999999999999987433332 12345554 4799999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCC-CCC----CCCCceEEEEccCCCchhhhhh--h---hhhccCCccccccchhhHHHHHHH-hh
Q psy1120 113 RIILEKTYEAVIDAGIN-PKS----LRGSKTGVFIGACFSESEKTWF--Y---EKLQINGFGITGCSRAMLANRVSY-WL 181 (883)
Q Consensus 113 rl~l~aa~eALedAG~~-~~~----~~~~~~gv~~g~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~a~~is~-~~ 181 (883)
+|++++++|||+||||. +.+ ++++++|||+|++.+++..... . ....+.++.+.++..|.++++|++ .|
T Consensus 1213 ~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~l 1292 (1887)
T 2uv8_A 1213 LFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLI 1292 (1887)
T ss_dssp HHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHHc
Confidence 99999999999999995 666 7889999999999887543221 1 112345666777888999999999 59
Q ss_pred CCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----------CCCCCCCccc
Q psy1120 182 GVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----------PDGRCKSFDE 250 (883)
Q Consensus 182 ~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----------~~g~~~pfd~ 250 (883)
|++||+++|+++||||++||++||++|++|+||+|||||+|. +++..+..|..+++++ |++.|||||.
T Consensus 1293 gl~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~ 1371 (1887)
T 2uv8_A 1293 SSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATT 1371 (1887)
T ss_dssp CCCSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBT
T ss_pred CCccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcc
Confidence 999999999999999999999999999999999999999998 6888899999999999 6799999999
Q ss_pred CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC------------------CHH--------
Q psy1120 251 AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP------------------SGA-------- 300 (883)
Q Consensus 251 ~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p------------------~~~-------- 300 (883)
+++||++|||||++||+++++|+ +||++|+|+++++|+.+ .++++| ++.
T Consensus 1372 ~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~-~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ 1450 (1887)
T 2uv8_A 1372 TRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIG-RSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKR 1450 (1887)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSC-SCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHH
T ss_pred cCCCcccccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCcc-ccCCCCCccccccccccccccCCCCcccchHHHHH
Confidence 99999999999999999999996 69999999999999864 233333 321
Q ss_pred -----------------------------------HH-------------------------------HHHHHHHHHHcC
Q psy1120 301 -----------------------------------LQ-------------------------------QRLLEDFYSECE 314 (883)
Q Consensus 301 -----------------------------------~~-------------------------------~~~i~~al~~ag 314 (883)
+| ..+|++||+++|
T Consensus 1451 ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AG 1530 (1887)
T 2uv8_A 1451 QLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYG 1530 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcC
Confidence 34 379999999999
Q ss_pred CCCCCccEEEEecCCCCCCcHHHHHHHHHhhCC---CCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCC
Q psy1120 315 VDPKNLAWIEAHGTGTKVGDPEEVQALENVFCP---GRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNIN 391 (883)
Q Consensus 315 l~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~---~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~ 391 (883)
++|+||||||+|||||++||++|+++|.++|+. ....+++|+|+|+|+||++||||+++++|++++|++|+||||+|
T Consensus 1531 l~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n 1610 (1887)
T 2uv8_A 1531 LTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRN 1610 (1887)
T ss_dssp CCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTT
T ss_pred CCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCC
Confidence 999999999999999999999999999999953 22457999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC
Q psy1120 392 FKSPRKDIP 400 (883)
Q Consensus 392 ~~~~~~~~~ 400 (883)
+++|||.++
T Consensus 1611 ~d~~dp~l~ 1619 (1887)
T 2uv8_A 1611 ADNVDKILE 1619 (1887)
T ss_dssp CSSBCGGGG
T ss_pred CCCCCCccc
Confidence 999999985
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-52 Score=553.43 Aligned_cols=359 Identities=18% Similarity=0.255 Sum_probs=303.6
Q ss_pred CCCHHHHHHHHhcCCCcc--cC--CCcccccCCCCCC----------CCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 47 STDVRDFGEKLNNKVDLI--SD--DDRRWKLGKEHPE----------IPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 47 g~~~~~~w~~l~~g~~~~--~~--~~~~~~~~~~~~~----------~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
-.+.++.|+...++.+.. .+ .+++|+....... .....|+++ +.||+.||||++++++.|||++
T Consensus 2571 ~~s~~~a~~~~~~~~~~~~i~~~~~~~~W~~~~~~~~~i~~p~~~~~~~~~gG~i~--d~FD~~~fgIs~rea~~mDp~~ 2648 (3089)
T 3zen_D 2571 VSSEADARAFVQFDPEHTVARPLPDSSDWEVTRKAGTEIRVPRKTKLSRTVGAQIP--TGFDPTVWGISPDMASSIDRVA 2648 (3089)
T ss_dssp EECHHHHHHHHTTSTTSEEEEECTTTCCEEEEECTTCEEEEEEEECCSCCEEECCC--TTCCTTTTTCCHHHHHHSCHHH
T ss_pred cCCHHHHHHHHHhCCCcceEEeCCCCcceeeeecCCCCcCCCCcCCccceEEEEcC--CCCChhhcCCCHHHHHhcCHHH
Confidence 367888999987765543 32 3478876421111 112234554 6899999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCC----CCCceEEEEccCCCchhhhhhh--h---hhccCCccccccchhhHHHHHHH-hhC
Q psy1120 113 RIILEKTYEAVIDAGINPKSL----RGSKTGVFIGACFSESEKTWFY--E---KLQINGFGITGCSRAMLANRVSY-WLG 182 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~----~~~~~gv~~g~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~a~~is~-~~~ 182 (883)
||+++++++||+||||+++++ ++.++|||+|++.+++...... . ........+++...++.++++++ +||
T Consensus 2649 rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~lG 2728 (3089)
T 3zen_D 2649 LWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSYVG 2728 (3089)
T ss_dssp HHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHHcC
Confidence 999999999999999998876 6789999999988775432111 0 11111223456677889999986 559
Q ss_pred CCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC-----------CCCCCCCcccC
Q psy1120 183 VNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----------PDGRCKSFDEA 251 (883)
Q Consensus 183 l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls-----------~~g~~~pfd~~ 251 (883)
++||+++|+++||||++||++||++|++|+||+|||||+|. +++..+..|..+++++ +++.|||||.+
T Consensus 2729 l~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~ 2807 (3089)
T 3zen_D 2729 GYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSKFSRANDRR 2807 (3089)
T ss_dssp CCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTT
T ss_pred CCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhhhhccCCcccccCccccC
Confidence 99999999999999999999999999999999999999999 7898999999999876 68999999999
Q ss_pred CCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCH-------HHHHHHHHHHHHHcCCCCCCc
Q psy1120 252 ANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSG-------ALQQRLLEDFYSECEVDPKNL 320 (883)
Q Consensus 252 ~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~-------~~~~~~i~~al~~agl~~~dI 320 (883)
++||++|||+|++|||++++|+ +||++|.|+++|+||.+ .+++.|+. .+|.++|++||+++|++|+||
T Consensus 2808 ~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~-~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DI 2886 (3089)
T 3zen_D 2808 RLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVH-TSIPAPGLGALGAARGGRESTLARSLAQLGVGADDI 2886 (3089)
T ss_dssp CCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCC-CCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGE
T ss_pred CCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcc-cCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHe
Confidence 9999999999999999999886 69999999999999975 57888862 478899999999999999999
Q ss_pred cEEEEecCCCCCCcHHHHH---HHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCC
Q psy1120 321 AWIEAHGTGTKVGDPEEVQ---ALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRK 397 (883)
Q Consensus 321 ~~ve~hgtgt~~gD~~E~~---Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~ 397 (883)
||||+|||||++||++|++ ++.++|+.....+++|+|+|+|+||++||||+++++|++++|+|++|||++||++|||
T Consensus 2887 dyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np 2966 (3089)
T 3zen_D 2887 AVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDD 2966 (3089)
T ss_dssp EEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBCG
T ss_pred eEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCC
Confidence 9999999999999999999 7888998655578999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCeeeec
Q psy1120 398 DIPSFHNGKIQLES 411 (883)
Q Consensus 398 ~~~~~~~~~~~~~~ 411 (883)
+++ .+.++.+..
T Consensus 2967 ~i~--~~~~~~~~~ 2978 (3089)
T 3zen_D 2967 ELA--TSGHFVWVR 2978 (3089)
T ss_dssp GGG--GCSSEEECS
T ss_pred Ccc--ccCCeeecC
Confidence 997 456676643
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=497.12 Aligned_cols=303 Identities=17% Similarity=0.197 Sum_probs=250.5
Q ss_pred CCCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhcc-CCCChHHHhccCCC-------------ccchhhhhH
Q psy1120 458 DTRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKP-KGVDVKRIITDTNP-------------KMFDNILNS 522 (883)
Q Consensus 458 ~~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~-~g~~l~~~l~~~~~-------------~~l~~~~~~ 522 (883)
..++++|||||||+||+|||++||+ +|+||+.+++|++++++ +||+|.+++++.+. ..++++.++
T Consensus 1344 ~~p~vafvFpGQGsQ~~GMG~~L~~~~p~fr~~~d~~d~~l~~~lG~sl~~~l~~~~~~~~~~~~~~~~~~~~L~~t~~a 1423 (3089)
T 3zen_D 1344 AAPKTVYAFPGQGIQHKGMGMEVRARSKAARKVWDSADKFTRETLGFSVLHVVRDNPTSLIASGVHYHHPDGVLFLTQFT 1423 (3089)
T ss_dssp ECSCEEEEECCSSCCCTTTTHHHHHHCHHHHHHHHHHHHHHHHHSSCCHHHHHHSCCSEEECSSCEEECSSCSTTSHHHH
T ss_pred cccceeeecCCCCCcchhhHHHHHHhCHHHHHHHHHHHHHHHHhcCCCHHHHHhcCccccccccccccCchhhhhhhHHH
Confidence 4578999999999999999999997 99999999999998875 59999999986532 458899999
Q ss_pred HHHHHHHHHHHHHHHHHcC--CCccEEeecCHHHHHH-HHHhccCChHhhHHHHHHHHHhhccccc------ccccEEEE
Q psy1120 523 FVGIAAIQIGLVDILRALN--ITPDHIIGHSVGELGC-AYADGCFTVEQTILAAYYRGLASVETEF------IRGAMAAV 593 (883)
Q Consensus 523 qp~i~a~qial~~ll~~~G--i~P~~v~GHSlGE~aA-a~~aG~lsleda~~lv~~Rg~~~~~~~~------~~G~M~av 593 (883)
||+||++|+|++++|++|| |+|++|+|||+|||+| +|+||+||++|+++++++||++|++... ..|+|+||
T Consensus 1424 Qpal~a~q~Al~~~l~~~G~~v~P~~v~GHSlGE~aALa~~AGvlsledal~lv~~Rg~lm~~~~~~~~~g~~~g~M~AV 1503 (3089)
T 3zen_D 1424 QVAMATVAAAQVAEMREQGAFVEGAIACGHSVGEYTALACVSGVYELEALLEVVFHRGSKMHDIVPRDELGRSNYRLAAI 1503 (3089)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCTTCCEEESTTHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHSSSCCCSSCCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCeEEeecCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhhcccCCCCCCcccEEEE
Confidence 9999999999999999999 9999999999999999 5669999999999999999999987632 13699998
Q ss_pred -----cCCHHHHhhcCC-------CCeEEeeecCCC-cEEEecCHHHHHHHHHHHHhC-----CC--eeEEcCCCCCccc
Q psy1120 594 -----GLGYKDLRSRCP-------PEIEVACHNSPD-SSTISGPEENVKKFVAELQAD-----NI--FARTINVANTEKH 653 (883)
Q Consensus 594 -----~~~~~~v~~~l~-------~~v~iA~~Nsp~-~~visG~~~~l~~l~~~l~~~-----gi--~~~~L~v~~~afH 653 (883)
+++.++++++|. ..|+|||+|+|+ |+||||+.++|+++.+.|+++ ++ +..+++| ++|||
T Consensus 1504 ~~~~igl~~~~v~~~l~~~~~~~~~~v~IA~~Nsp~~q~ViSG~~~al~~l~~~l~~~~~~~g~~~~~~l~l~V-~~aFH 1582 (3089)
T 3zen_D 1504 RPSQIDLDDADVKDFVAEISERTGEFLEIVNFNLRGSQYAIAGTVAGLEALEEEIERRRQITGGKRSFILVPGI-DVPFH 1582 (3089)
T ss_dssp CCCSSSCCHHHHHHHHHHHHHHHCCCEEEEEECSSSSCEEEEEEHHHHHHHHHHHHHHSTTCSSCTTEEEETTC-CCCCS
T ss_pred ecccCCCCHHHHHHHHHHhhhccCCeEEEEEEcCCCCeEEEEcCHHHHHHHHHHHHhhhhhcCCceEEEccCCC-CcccC
Confidence 899999999885 249999999997 999999999999999999876 33 4445579 99999
Q ss_pred cchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEecccCCccccc-------------------------
Q psy1120 654 APLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTT------------------------- 708 (883)
Q Consensus 654 s~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~------------------------- 708 (883)
|++| + ++.+ +|++.+....... +.++.|.+|+||++++......
T Consensus 1583 S~~m---~--p~~~----~~~~~L~~~~~~~--~~~~~p~ip~iSnvtg~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~~ 1651 (3089)
T 3zen_D 1583 SSVL---R--VGVA----DFRRSLERVMPRD--KDPELIIGRYIPNLVPRPFTLDRDFIQEIRDLVPAEPLDEVLADYDT 1651 (3089)
T ss_dssp STTC---G--GGHH----HHHHHHHHHSCSC--CCHHHHTTTEECSSSCSCCCCSHHHHHHHHHHSCCHHHHHHHHCCCC
T ss_pred hHHH---H--HHHH----HHHHHHHhcccCC--CCCCCCCceEEeCCCCceeeccccccccccccccccccccccCChHH
Confidence 9999 7 7777 8888888321111 1234578999999999865310
Q ss_pred ---c-ccc---cCCHHHHHHHhcCCccHHHHHHHhhc------C--CEEEEECCCc--cchHHHHhhcC---CCccEEee
Q psy1120 709 ---H-LAK---YSSAEYHTNNLLSPVLFEETSRHIQK------N--AITLEIAPHG--LLQAILRRSLP---KTVTNVSL 768 (883)
Q Consensus 709 ---~-~~~---~~~~~y~~~~l~~pV~f~~ai~~l~~------~--~~~iEiGP~~--~L~~~i~~~l~---~~~~~~~~ 768 (883)
+ ..+ ....+||++|+++||+|.++++.|.+ . .+|||||||+ +|+++++++++ .....+.+
T Consensus 1652 w~~~~~~~l~~~~~~e~l~~ql~~PVrf~~av~~l~~~~~~~~~g~~~fvEiGPg~~p~L~~lvk~~l~~~~~~~~~~~~ 1731 (3089)
T 3zen_D 1652 WRNEKPKELCRKVVIELLAWQFASPVRWIETQDLLFIEEAAGGLGVERFVEIGVKSAPTVAGLATNTLKLPEYSHSTVEV 1731 (3089)
T ss_dssp CSTTHHHHHHHHHHHHHHHTTTTSCEEHHHHHHHHHHHHHHHCCCCEEEEECSGGGHHHHHHHHHHHHHTTTTTCCCEEE
T ss_pred hhhcchhhhhhhhHHHHHHHHHhCcchHHHHHHHHHhhccccCCCCcEEEEECCCChhhhhhHHHHhhcccccCCcceeE
Confidence 0 000 01459999999999999999999987 4 4799999988 99999999983 12234555
Q ss_pred ccCC
Q psy1120 769 TQRE 772 (883)
Q Consensus 769 ~~~~ 772 (883)
++++
T Consensus 1732 l~~~ 1735 (3089)
T 3zen_D 1732 LNSE 1735 (3089)
T ss_dssp EETT
T ss_pred EEec
Confidence 5444
|
| >2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=473.52 Aligned_cols=323 Identities=17% Similarity=0.205 Sum_probs=266.5
Q ss_pred CCCEEEEeCCCCc--hhhHhhHHHhc-C-hHHHHHHHHHHHHhc-------------cCCCChHHHhccC----CCccch
Q psy1120 459 TRPLWFVFSGMGS--QWDGMGTELME-I-PIFAATIEKLQAVLK-------------PKGVDVKRIITDT----NPKMFD 517 (883)
Q Consensus 459 ~~~v~fvF~GQGs--q~~gMg~~L~~-~-p~fr~~~~~~~~~l~-------------~~g~~l~~~l~~~----~~~~l~ 517 (883)
+++++|+|||||+ ||+|||++||+ + |.||+.+++|+++|+ ++|+++.+++++. +.+.+.
T Consensus 153 ~~~iafvFpGQGs~~Q~~gMgreL~~~~~p~~r~~~d~a~~~L~~l~~~~~~~~~~~~~G~dL~~~l~~~~~~p~~~~L~ 232 (2051)
T 2uv8_G 153 NAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLL 232 (2051)
T ss_dssp SCCEEEEECCTTSCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHSSSHHHHCTTCCCHHHHHHCGGGCCCHHHHH
T ss_pred CCcEEEEECCCCCchhhHHHHHHHHHhChHHHHHHHHHHHHHHhhhccccccccccccCCCCHHHHHhCCCcCCchhhhh
Confidence 4689999999999 99999999997 7 799999999999974 2589999998865 345688
Q ss_pred hhhhHHHHHHHHHHHHHHHH-HHcCCCc-------cEEeecCHHHHHHHHHhccCChHhhH-------HHHHHHH---H-
Q psy1120 518 NILNSFVGIAAIQIGLVDIL-RALNITP-------DHIIGHSVGELGCAYADGCFTVEQTI-------LAAYYRG---L- 578 (883)
Q Consensus 518 ~~~~~qp~i~a~qial~~ll-~~~Gi~P-------~~v~GHSlGE~aAa~~aG~lsleda~-------~lv~~Rg---~- 578 (883)
++.++||+||++|+|++++| +++|++| ++++|||+|||+|+|+||++|++|++ +++++++ +
T Consensus 233 ~t~~sQPaI~a~qlAl~~~l~~~~Gv~P~~~~~~~~av~GHSlGE~aAa~aAGals~edal~~~~~al~La~~ig~R~~~ 312 (2051)
T 2uv8_G 233 SIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYE 312 (2051)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHTEEEEEESTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCchhhccccceeecCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999 7899999 99999999999999999999999988 8855544 4
Q ss_pred ----------hhcccc-cc---cccEEEE-cCCHHHHhhcCC---------CCeEEeeecCCCcEEEecCHHHHHHHHHH
Q psy1120 579 ----------ASVETE-FI---RGAMAAV-GLGYKDLRSRCP---------PEIEVACHNSPDSSTISGPEENVKKFVAE 634 (883)
Q Consensus 579 ----------~~~~~~-~~---~G~M~av-~~~~~~v~~~l~---------~~v~iA~~Nsp~~~visG~~~~l~~l~~~ 634 (883)
+|++.. .+ .|+|++| +++.++++++|. ..|+|||+|+|+|+||||++++|+++.+.
T Consensus 313 ~~p~~~l~~~lmq~a~~~g~g~~G~MlAV~gl~~e~v~~ll~~~~~~l~~g~~V~IA~~NsP~qvVISG~~~aL~~l~~~ 392 (2051)
T 2uv8_G 313 AYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLT 392 (2051)
T ss_dssp HSCCCCCCHHHHHHHHHTTCCSCCSEEEEESSCHHHHHHHHHHHHHTSCGGGCCEEEECCSSSEEEEESCHHHHHHHHHH
T ss_pred ccccccchHHHHHHhhhccCCCccceEEeecCCHHHHHHHHHHhhhccCCCCceEEEEEcCCCCeEecCCHHHHHHHHHH
Confidence 776652 12 6899997 899999999875 24999999999999999999999999999
Q ss_pred HHhCCCe------------------eEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcce
Q psy1120 635 LQADNIF------------------ARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKW 696 (883)
Q Consensus 635 l~~~gi~------------------~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 696 (883)
|++.|++ +++|+| ++|||||+| + ++.+ ++.+.+. ...+.+..+.|.+|+
T Consensus 393 L~~~ga~~~~~~~~~pfs~Rkp~~~~~~L~V-s~aFHSplM---~--pa~~----~l~~~L~---~~~i~~~~~~p~iPv 459 (2051)
T 2uv8_G 393 LRKAKAPSGLDQSRIPFSERKLKFSNRFLPV-ASPFHSHLL---V--PASD----LINKDLV---KNNVSFNAKDIQIPV 459 (2051)
T ss_dssp HHHHSCCTTCCGGGSCGGGCCCCCEEEECSC-SSCTTSTTT---H--HHHH----HHHHHHH---SSSCCCCTTTCCSCB
T ss_pred HHhcCCccccccccccccccccccceEEccC-CCCccChhh---H--HHHH----HHHHHHH---hCCccccCCCCcceE
Confidence 9988763 999999 999999999 7 6665 6666655 112334447899999
Q ss_pred EecccCCccccccccccCCHHHHHHHhc-CCccHHHHHHHhhcCCEEEEECCCcc--chHHHHhhcC-CCccEEeeccCC
Q psy1120 697 LSTSNTEANWTTHLAKYSSAEYHTNNLL-SPVLFEETSRHIQKNAITLEIAPHGL--LQAILRRSLP-KTVTNVSLTQRE 772 (883)
Q Consensus 697 ~S~~~~~~~~~~~~~~~~~~~y~~~~l~-~pV~f~~ai~~l~~~~~~iEiGP~~~--L~~~i~~~l~-~~~~~~~~~~~~ 772 (883)
||++++...... .....+||++|++ +||+|.++++. ...+|||+|||++ |++++++++. .....++...++
T Consensus 460 ~SnvtG~~~~~~---~~~i~~~L~~qi~~~PV~w~~av~~--G~~~fvEiGPG~~sgLt~L~kril~g~gv~vi~~~~~~ 534 (2051)
T 2uv8_G 460 YDTFDGSDLRVL---SGSISERIVDCIIRLPVKWETTTQF--KATHILDFGPGGASGLGVLTHRNKDGTGVRVIVAGTLD 534 (2051)
T ss_dssp BCTTTCSBSSSC---SSCHHHHHHHHHHTSCBCHHHHTCC--CCSEEEECSSSGGGSHHHHHHHHHTTBSCEEEETTCCC
T ss_pred EECCCCcccCCc---hHHHHHHHHHhhccCccchHHHhcc--CCCEEEEcCCCChHHHHHHHHHhhcCCCceEEEccCcc
Confidence 999999765321 2346899999999 99999999987 5678999999998 9999999973 445555554443
Q ss_pred CcchHHHHHHHHHHHHHcC-----CCCCCCCcCC
Q psy1120 773 NANSVLYLLQALGKLYESG-----VHPHLANLYP 801 (883)
Q Consensus 773 ~~~~~~~ll~~l~~L~~~G-----~~vd~~~~~~ 801 (883)
+. ....+..+++||..| +++||...|.
T Consensus 535 ~~--~~~~~~~~~~Lf~~g~~~~~~~~~W~~~f~ 566 (2051)
T 2uv8_G 535 IN--PDDDYGFKQEIFDVTSNGLKKNPNWLEEYH 566 (2051)
T ss_dssp CC--SSCSSBCTTTTTCCSGGGCCCCCBHHHHTC
T ss_pred cc--chhhHHHHHHHhccCCcccccCCCcccccC
Confidence 32 133456678998888 8899986554
|
| >2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=452.02 Aligned_cols=323 Identities=15% Similarity=0.167 Sum_probs=265.9
Q ss_pred CCCCEEEEeCCCCc--hhhHhhHHHhc-C-hHHHHHHHHHHHHhcc------------CCCChHHHhccC----CCccch
Q psy1120 458 DTRPLWFVFSGMGS--QWDGMGTELME-I-PIFAATIEKLQAVLKP------------KGVDVKRIITDT----NPKMFD 517 (883)
Q Consensus 458 ~~~~v~fvF~GQGs--q~~gMg~~L~~-~-p~fr~~~~~~~~~l~~------------~g~~l~~~l~~~----~~~~l~ 517 (883)
.+.+++|+|+|||+ ||+|||++||+ + |.|++.+++|++++++ .|++|.+++... +.+.+.
T Consensus 147 ~~~~ia~vF~GQGs~~q~~gmlr~L~~~~~p~~r~~l~~a~~~L~~l~~lp~~~~~~p~g~dL~~~l~~~~~~P~~~~L~ 226 (2060)
T 2uva_G 147 NNVKIYSIFGGQGNIEEYFDELREIYTTYPSFVEDLITSIAELLQSLAREWDAVKQYPKGLDILQWLHNPESQPDTDYLV 226 (2060)
T ss_dssp TSCCEEEEECCCSSCSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSHHHHHHCSSCCCHHHHHHSGGGCCCHHHHH
T ss_pred CCCCEEEEECCCCCchhhHHHHHHHHHhccHHHHHHHHHHHHHHHHhhcccccccccCCCCCHHHHHhcCCcCCchHHhh
Confidence 34689999999999 99999999997 6 9999999999999753 589999998764 334578
Q ss_pred hhhhHHHHHHHHHHHHHHHH-HHcCCCc-------cEEeecCHHHHHHHHHhccCChHhhH-------HH---HHHHHH-
Q psy1120 518 NILNSFVGIAAIQIGLVDIL-RALNITP-------DHIIGHSVGELGCAYADGCFTVEQTI-------LA---AYYRGL- 578 (883)
Q Consensus 518 ~~~~~qp~i~a~qial~~ll-~~~Gi~P-------~~v~GHSlGE~aAa~~aG~lsleda~-------~l---v~~Rg~- 578 (883)
++.++||+|+++|+|++++| +++|++| ++++|||+|||+|+|+||++|++|++ ++ +..|++
T Consensus 227 ~t~vsQP~i~a~QlAl~~~l~~~~Gi~P~~~~~~~~av~GHS~GElaAa~aAGalS~edal~~a~eav~LAf~vg~R~~~ 306 (2060)
T 2uva_G 227 SAPVSFPLIGLVQLAHYMITCKTLGREPGELLERFSGTTGHSQGIVVAAAIATARTWDEFATAAKRAVELLFWIGLRSQQ 306 (2060)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHTCSCEEESSHHHHHHHHTTSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhHHHHHHHHHHHHHHHHHhCCCccccccccceeecCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999998 8999999 99999999999999999999999999 88 556666
Q ss_pred ----------hhccccc----ccccEEEE-cCCHHHHhhcCC---------CCeEEeeecCCCcEEEecCHHHHHHHHHH
Q psy1120 579 ----------ASVETEF----IRGAMAAV-GLGYKDLRSRCP---------PEIEVACHNSPDSSTISGPEENVKKFVAE 634 (883)
Q Consensus 579 ----------~~~~~~~----~~G~M~av-~~~~~~v~~~l~---------~~v~iA~~Nsp~~~visG~~~~l~~l~~~ 634 (883)
+|++... ..|.|++| +++.++++++|. ..++|||+|+|+|+||||++++|+++.+.
T Consensus 307 ~~~~~~l~p~lm~~a~~~g~~~~g~MlAV~gl~~e~v~~~l~~~~~~lp~~~~v~IA~~Nsp~qvVISG~~~aL~~l~~~ 386 (2060)
T 2uva_G 307 AYPRTSLAPSTLQDSVENGEGTPTPMLSIRDLTRSAVQEHIDATNQHLPEDRHIGISLVNSARNFVVTGPPISLYGLNLR 386 (2060)
T ss_dssp HSCCCCCCHHHHHHHHHTTCCSCCSEEEEETCCHHHHHHHHHHHHHTSCGGGCCEEEEESSSSEEEEESCHHHHHHHHHH
T ss_pred ccccccccHHHHHHhhccCCCCCceEEEEeCCCHHHHHHHHHHhhhcCCCCCeEEEEEEeCCCCeEeeCCHHHHHHHHHH
Confidence 5554321 25889999 999999998874 35999999999999999999999999999
Q ss_pred HHhCCC------------------eeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcce
Q psy1120 635 LQADNI------------------FARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKW 696 (883)
Q Consensus 635 l~~~gi------------------~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 696 (883)
|++.|+ ++++|+| ++|||||+| + ++.+ .+.+.+. .+.+....|.+|+
T Consensus 387 L~~~g~~~~~~~~~ipfs~rkp~~~~~~L~V-s~pFHSp~m---~--~a~~----~l~~~l~-----~i~~~~~~p~iPv 451 (2060)
T 2uva_G 387 LRKVKAPTGLDQNRIPFTQRKARFVNRFLPI-TAPFHSPYL---A--GAHA----HILGDVD-----DMKIPASSLVIPV 451 (2060)
T ss_dssp HHTTSCCSSCCCTTSCGGGSCCCCEEEECSC-CSCCSSTTS---H--HHHH----HHHHHTS-----SSCCCGGGCSSCB
T ss_pred HHHcCCcccccccccccccccccceeEEccC-CCCcchHHH---H--HHHH----HHHHHHh-----hCCccCCCCCcEE
Confidence 999876 6899999 999999999 7 5555 6666666 5555446789999
Q ss_pred EecccCCccccccccccCCHHHHHHHhc-CCccHHHHHHHhhcCCEEEEECCCcc--chHHHHhhcCC-CccEEeeccCC
Q psy1120 697 LSTSNTEANWTTHLAKYSSAEYHTNNLL-SPVLFEETSRHIQKNAITLEIAPHGL--LQAILRRSLPK-TVTNVSLTQRE 772 (883)
Q Consensus 697 ~S~~~~~~~~~~~~~~~~~~~y~~~~l~-~pV~f~~ai~~l~~~~~~iEiGP~~~--L~~~i~~~l~~-~~~~~~~~~~~ 772 (883)
+|+++|......+ .....+||++|++ +||+|.++++.+ ...+|||+|||++ |++++++++.. ....+....++
T Consensus 452 ~S~vtG~~~~~~~--~~~l~~~l~~qi~~~PV~w~~av~~l-g~~~~IEiGPg~~s~L~~L~~~~l~g~gv~vv~~~~~~ 528 (2060)
T 2uva_G 452 YDTKTGQDLRELG--DEDIIPELVRMITYDPVNWETATVFP-DATHIVDFGPGGVSGIGVLTNRNKDGTGVRVILAGAID 528 (2060)
T ss_dssp BCSSSCCBGGGSS--SCCSHHHHHHHHHTSCBCHHHHTCCS-SCSEEEECSSSTTTSHHHHHHHHTTTTTCEEEETTCSC
T ss_pred EECCCCCccCcCC--hhHHHHHHHHHhccCcEeHHHHHHhc-CCCEEEEeCCCChHHHHHHHHHhhcCCCceEEEccCcc
Confidence 9999998754321 2236899999999 999999999876 5678999999999 99999999753 33334333332
Q ss_pred CcchHHHHHHHHHHHHHcC-----CCCCCCCcCC
Q psy1120 773 NANSVLYLLQALGKLYESG-----VHPHLANLYP 801 (883)
Q Consensus 773 ~~~~~~~ll~~l~~L~~~G-----~~vd~~~~~~ 801 (883)
+.+ ..+..++.||..| +++||...|.
T Consensus 529 ~~~---~~~~~~~~Lf~~g~~~~~~~~~W~~~f~ 559 (2060)
T 2uva_G 529 GTN---TEVGYKPELFDRDDNAVQFAVDWVKEHG 559 (2060)
T ss_dssp CSC---SSSBCGGGSSCCSGGGCCCCCCHHHHHC
T ss_pred ccc---hhhhhHHHHHhccccccccCcccccccC
Confidence 222 2446677888888 8899996664
|
| >2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=415.63 Aligned_cols=260 Identities=15% Similarity=0.216 Sum_probs=214.2
Q ss_pred CCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccC-CCChHHHhccC-------------------------
Q psy1120 459 TRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPK-GVDVKRIITDT------------------------- 511 (883)
Q Consensus 459 ~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~-g~~l~~~l~~~------------------------- 511 (883)
.++++|||||||+||+|||++||+ +|+||+.+++|++++++. |++|.+++++.
T Consensus 1659 ~~~~afvFpGQGsQ~~GMG~~Ly~~~p~fr~~~d~~d~~l~~~lg~sl~~il~~~p~~~t~~fgg~~g~~ir~~yl~~~~ 1738 (2051)
T 2uv8_G 1659 QPVTTFVFTGQGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIF 1738 (2051)
T ss_dssp CSCEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHHHHHHSCCHHHHHHSCCSEEEEECCSHHHHHHHHHHHTCEE
T ss_pred cceeEEecCCCCCchHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCchHHHHHhcCccccccccccccccchhhhhhhccc
Confidence 468999999999999999999997 899999999999998764 99999987542
Q ss_pred ----------------------------CCccchhhhhHHHHHHHHHHHHHHHHHHcCCCcc--EEeecCHHHHHHH-HH
Q psy1120 512 ----------------------------NPKMFDNILNSFVGIAAIQIGLVDILRALNITPD--HIIGHSVGELGCA-YA 560 (883)
Q Consensus 512 ----------------------------~~~~l~~~~~~qp~i~a~qial~~ll~~~Gi~P~--~v~GHSlGE~aAa-~~ 560 (883)
+...++++.++||+||++|+|++++|++||++|+ +++|||+|||+|+ |+
T Consensus 1739 ~~~~~g~~~~~~~~~~~~~~~~~~tf~~~~~~L~~T~~aQPAl~av~~Al~~ll~~~Gv~P~~~~v~GHSlGEyaALa~~ 1818 (2051)
T 2uv8_G 1739 ETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASL 1818 (2051)
T ss_dssp CCEETTEECCEESSSSCCTTCCEEEEECSSCGGGSHHHHHHHHHHHHHHHHHHHHHTTCCCTTCEEEECTTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCCchhhhhhhHHHHHHHHHHHHHHHHHHHHcCCCCCcceeccCCHHHHHHHHHH
Confidence 1234788999999999999999999999999997 9999999999995 57
Q ss_pred hccCChHhhHHHHHHHHHhhccccc------ccccEEEEc-------CCHHHHhhcCC-------CCeEEeeecC-CCcE
Q psy1120 561 DGCFTVEQTILAAYYRGLASVETEF------IRGAMAAVG-------LGYKDLRSRCP-------PEIEVACHNS-PDSS 619 (883)
Q Consensus 561 aG~lsleda~~lv~~Rg~~~~~~~~------~~G~M~av~-------~~~~~v~~~l~-------~~v~iA~~Ns-p~~~ 619 (883)
||+||+||+++++++||++|++... ..|+|+||. ++.++++.++. ..|+|||+|+ |+|+
T Consensus 1819 AGvLsledal~LV~~Rg~lMq~a~~~~~~G~~~g~M~AV~~~~~~~~~~~~~l~~~~~~i~~~~g~~v~IAn~N~~p~q~ 1898 (2051)
T 2uv8_G 1819 ADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQY 1898 (2051)
T ss_dssp HCCSCHHHHHHHHHHHHHHHHHSSCBCSSCCBSEEEEEECHHHHCTTCCHHHHHHHHHHHHHHHTSCEEEEEEEETTTEE
T ss_pred cCCcCHHHHHHHHHHHHHHHHHhhhhcccCCCCceEEEEEccccccCCCHHHHHHHHHHhhhccCCeEEEEEEcCCCCeE
Confidence 9999999999999999999987532 257999996 37777776653 3599999999 9999
Q ss_pred EEecCHHHHHHHHHHH---------------------------------------------HhCCCeeEEcC-CCCCccc
Q psy1120 620 TISGPEENVKKFVAEL---------------------------------------------QADNIFARTIN-VANTEKH 653 (883)
Q Consensus 620 visG~~~~l~~l~~~l---------------------------------------------~~~gi~~~~L~-v~~~afH 653 (883)
||||+.++|+++.+.| .++|+++++|+ | ++|||
T Consensus 1899 VvsG~~~al~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~G~~~~~L~gV-s~aFH 1977 (2051)
T 2uv8_G 1899 VAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEVEGHLFEIIDEASKKSAVKPRPLKLERGFACIPLVGI-SVPFH 1977 (2051)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTTCCHHHHHHHSCHHHHHHHHHHHHHHHHHHHHTSCTTCCCCCCSSEEECTTC-CSCCS
T ss_pred EEEeCHHHHHHHHHhhhhhcccccccccccccccchhhhhhhhhhhhhhhhhccccccchhhhcCcceeecCCC-Ccccc
Confidence 9999999999987753 14689999999 9 99999
Q ss_pred cchhhcccCCCCCCcchHHHHHHHHhh-hccccccCCCCCCcceEecccCCccccccccccCCHHHHHHH--hcCCccHH
Q psy1120 654 APLKQCRAQRPPAPWLTDDIRACMKAR-DRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYHTNN--LLSPVLFE 730 (883)
Q Consensus 654 s~~m~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~--l~~pV~f~ 730 (883)
|++| + ++.+ +|++.+... ... ...++.+.+|++|++++.... .+.+||.+. ...+++|.
T Consensus 1978 S~~m---~--p~~~----~f~~~L~~~i~~~--~i~~~~~~~p~iSnvtg~~~~-------~~~~~~~~l~~~~~sp~~~ 2039 (2051)
T 2uv8_G 1978 STYL---M--NGVK----PFKSFLKKNIIKE--NVKVARLAGKYIPNLTAKPFQ-------VTKEYFQDVYDLTGSEPIK 2039 (2051)
T ss_dssp SGGG---S--TTST----THHHHHHTTSCGG--GCCHHHHTTTEECSSSCSCCC-------CSHHHHHHHHHHHCCHHHH
T ss_pred cHHH---H--HHHH----HHHHHHHhhcccc--cCCCCCCCCeEEECCCCceec-------CCHHHHHHHHHhhCCCcHH
Confidence 9999 8 9998 888888721 000 113345678999999998742 245777542 23567999
Q ss_pred HHHHHhh
Q psy1120 731 ETSRHIQ 737 (883)
Q Consensus 731 ~ai~~l~ 737 (883)
++++...
T Consensus 2040 ~~l~~~~ 2046 (2051)
T 2uv8_G 2040 EIIDNWE 2046 (2051)
T ss_dssp HHHHTTT
T ss_pred HHHHHHH
Confidence 9987643
|
| >2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=415.80 Aligned_cols=259 Identities=15% Similarity=0.221 Sum_probs=213.7
Q ss_pred CCCCEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccC-CCChHHHhccC------------------------
Q psy1120 458 DTRPLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPK-GVDVKRIITDT------------------------ 511 (883)
Q Consensus 458 ~~~~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~-g~~l~~~l~~~------------------------ 511 (883)
..++++|||||||+||+|||++||+ +|+||+.+++|++++++. |++|.+++++.
T Consensus 1668 ~~~~~afvFpGQGsQ~~GMG~~Ly~~~p~fr~~~d~~d~~l~~~~g~sl~~~l~~~p~~~~~~fgg~~g~~~r~~y~~~~ 1747 (2060)
T 2uva_G 1668 EQPVTAYVFTGQGSQEQGMGMDLYATSPVAKEVWDRADKHFRENYGFSIIDIVKNNPKELTVHFGGPRGKIIRQNYMSMT 1747 (2060)
T ss_dssp ECCCCEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHHHHHHSCCHHHHHHSCCSEEEEECCSHHHHHHHHHHHTCE
T ss_pred ccccceeeeCCCCCcccchhHHHHhcCHHHHHHHHHHHHHHHHhhchHHHHHHhcCcccccccccccccchhhhhhhhcc
Confidence 3568999999999999999999997 899999999999998764 99999988542
Q ss_pred ------------------------------CCccchhhhhHHHHHHHHHHHHHHHHHHcCCCcc--EEeecCHHHHHHH-
Q psy1120 512 ------------------------------NPKMFDNILNSFVGIAAIQIGLVDILRALNITPD--HIIGHSVGELGCA- 558 (883)
Q Consensus 512 ------------------------------~~~~l~~~~~~qp~i~a~qial~~ll~~~Gi~P~--~v~GHSlGE~aAa- 558 (883)
+...++++.++||+||++|+|++++|++||++|+ +++|||+|||+|+
T Consensus 1748 ~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~L~~t~~aQPAl~a~~~Al~~~l~~~Gi~p~~~~v~GHSlGEyaALa 1827 (2060)
T 2uva_G 1748 FETVNADGSIKTEKIFKEVDENSTSYTYRSPSGLLSATQFTQPALTLMEKASFEDMRSKGLVQRDSTFAGHSLGEYSALV 1827 (2060)
T ss_dssp EEEECTTSCEEEEESSTTCSTTCCEEEEECTTCTTTSHHHHHHHHHHHHHHHHHHHHHHTCCCSSCEEEESTTHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCchhhhhhhHHHHHHHHHHHHHHHHHHHHcCCCCCcceeeccCHHHHHHHH
Confidence 1234788999999999999999999999999997 9999999999995
Q ss_pred HHhccCChHhhHHHHHHHHHhhccccc------ccccEEEEcC-------CHHHHhhcCC-------CCeEEeeecC-CC
Q psy1120 559 YADGCFTVEQTILAAYYRGLASVETEF------IRGAMAAVGL-------GYKDLRSRCP-------PEIEVACHNS-PD 617 (883)
Q Consensus 559 ~~aG~lsleda~~lv~~Rg~~~~~~~~------~~G~M~av~~-------~~~~v~~~l~-------~~v~iA~~Ns-p~ 617 (883)
|+||+||+||+++++++||++|++... ..|+|+||.. +.++++.++. ..|+|||+|+ |+
T Consensus 1828 ~~AGvlsledal~lV~~Rg~lm~~~~~~~~~G~~~g~M~AV~~~~~~~~~~~~~l~~~~~~i~~~~g~~v~ian~N~~p~ 1907 (2060)
T 2uva_G 1828 ALADVMPIESLVSVVFYRGLTMQVAVERDEQGRSNYAMCAVNPSRISPTFTEQALQYVVENIAEVTGWLLEIVNYNVANM 1907 (2060)
T ss_dssp HHSCCSCHHHHHHHHHHHHHHHHHSSCBCSSCCBSBCCEEECGGGTCTTCCHHHHHHHHHHHHHHSCSCEEEEEEEETTT
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHhhhhcccCCCCceEEEEEccccccCCCHHHHHHHHHHHhhccCCeEEEEEEeCCCC
Confidence 579999999999999999999987532 2579999964 7777777653 3599999999 99
Q ss_pred cEEEecCHHHHHHHHHHH---------------------------------------------HhCCCeeEEcC-CCCCc
Q psy1120 618 SSTISGPEENVKKFVAEL---------------------------------------------QADNIFARTIN-VANTE 651 (883)
Q Consensus 618 ~~visG~~~~l~~l~~~l---------------------------------------------~~~gi~~~~L~-v~~~a 651 (883)
|+||||+.++|+++.+.| .++|+++++|+ | ++|
T Consensus 1908 q~VisG~~~al~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~L~gV-~~a 1986 (2060)
T 2uva_G 1908 QYVAAGDLRALDTLANVLNILKMQKIDIQALMQSMSLEDVRAHLVEIIQECRKQTEAKPQPVQLERGFATIPLRGI-DVP 1986 (2060)
T ss_dssp EEEEEEBTTHHHHHHHHHHHHHHTTCCTTTTTTSSCHHHHHHHHHHHHHHHHHHHHHSCSSCCCCCCSSEEECTTC-CSC
T ss_pred cEEEECCHHHHHHHHHHhhhhcccccccccccccccchhhhhhhhhhhhhhhhhhhccccchhhhcCceEEECCCc-Ccc
Confidence 999999999999998753 15789999999 9 999
Q ss_pred cccchhhcccCCCCCCcchHHHHHHHHhh-hccccccCCCCCCcceEecccCCccccccccccCCHHHH---HHHhcCCc
Q psy1120 652 KHAPLKQCRAQRPPAPWLTDDIRACMKAR-DRAHVKFQPKPRSTKWLSTSNTEANWTTHLAKYSSAEYH---TNNLLSPV 727 (883)
Q Consensus 652 fHs~~m~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~y~---~~~l~~pV 727 (883)
|||++| + ++.+ +|++.+... .... ..++.+.+|++|++++..... +.+|| .+++. ++
T Consensus 1987 FHS~~m---~--~~~~----~f~~~L~~~i~~~~--i~~~~~~~p~isnvtg~~~~~-------~~~~~~~l~~~~~-sp 2047 (2060)
T 2uva_G 1987 FHSTFL---R--SGVK----PFRSFLLKKINKTT--IDPSKLIGKYIPNVTAKPFEI-------SKEYFEEVHRLTG-SP 2047 (2060)
T ss_dssp CSSSGG---G--TTHH----HHHHHHHHHCCGGG--CCHHHHTTTEECSSSCSCCCC-------STTHHHHHHHHSC-CH
T ss_pred cccHHH---H--HHHH----HHHHHHHhhccccc--CCCCCCCceEEECCCCccccC-------CHHHHHHHHHhhC-CC
Confidence 999999 8 8888 888888731 1111 133557889999999987531 33455 44554 45
Q ss_pred cHHHHHHHh
Q psy1120 728 LFEETSRHI 736 (883)
Q Consensus 728 ~f~~ai~~l 736 (883)
+|.++++..
T Consensus 2048 ~~~~~l~~~ 2056 (2060)
T 2uva_G 2048 KIANILANW 2056 (2060)
T ss_dssp HHHHHHHSG
T ss_pred cHHHHHHHH
Confidence 999998754
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-32 Score=309.77 Aligned_cols=241 Identities=16% Similarity=0.164 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCce
Q psy1120 111 MCRIILEKTYEAVIDA-GINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPS 187 (883)
Q Consensus 111 ~~rl~l~aa~eALedA-G~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps 187 (883)
.++|+++++++||+|| |+++++++ +|++|+..+++. ..+.+++++++.||| +||+
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id----~v~~g~~~~~~~------------------~~~~~a~~ia~~lgl~~~~p~ 87 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVE----DVIWGCVNQTLE------------------QGWNIARMASLMTQIPHTSAA 87 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE----EEEEECSSBSBT------------------TTTTHHHHHHTTSSSCTTSEE
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC----EEEEEeeccccC------------------CCCcHHHHHHHHcCCCCCccE
Confidence 4679999999999999 99887765 699997655431 014578999999999 8999
Q ss_pred eeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hhhH------------------HHH------Hhc------
Q psy1120 188 YTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PYVS------------------LQF------ARL------ 236 (883)
Q Consensus 188 ~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~~~------------------~~~------~~~------ 236 (883)
++|+++|+|++.||++|+++|++|+||++||||+|.+.. |... +.. .+.
T Consensus 88 ~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~ 167 (390)
T 1wdk_C 88 QTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQ 167 (390)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHH
T ss_pred EEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHH
Confidence 999999999999999999999999999999999997643 2210 111 000
Q ss_pred ------------------CCCC----C------CCCCCCcccC---------------------CCCcc-------cccc
Q psy1120 237 ------------------GVLS----P------DGRCKSFDEA---------------------ANGYC-------RSEA 260 (883)
Q Consensus 237 ------------------~~ls----~------~g~~~pfd~~---------------------~~G~~-------~gEG 260 (883)
+.+. | .+.|+|||.+ ++|++ ++||
T Consensus 168 ~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dG 247 (390)
T 1wdk_C 168 QDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDG 247 (390)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccch
Confidence 1111 1 1223799998 79999 9999
Q ss_pred eEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHH
Q psy1120 261 VCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPE 336 (883)
Q Consensus 261 a~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~ 336 (883)
++++||+++++|+ +++++|+|++.+++... +.+.++..+++++|+++|++|+||||||+|+++|.
T Consensus 248 AaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~------~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~----- 316 (390)
T 1wdk_C 248 ASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPA------IMGYGPVPATQKALKRAGLNMADIDFIELNEAFAA----- 316 (390)
T ss_dssp EEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGG------GGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHH-----
T ss_pred hheeEEecHHHHHHcCCCccEEEEEEEEeccChh------hcchhHHHHHHHHHHHcCCChhhCcEEEeccCCHH-----
Confidence 9999999999886 58999999999876521 33567889999999999999999999999999874
Q ss_pred HHHHHHHhhCCCC--CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 337 EVQALENVFCPGR--TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 337 E~~Ai~~~f~~~~--~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
|..++.+.|+-.+ ..++++++.|.++||+.||+|+.++++++++|+++
T Consensus 317 ~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~ 366 (390)
T 1wdk_C 317 QALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN 366 (390)
T ss_dssp HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc
Confidence 7778888886421 34688999999999999999999999999999986
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=301.53 Aligned_cols=236 Identities=17% Similarity=0.187 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
++|+++++++||+|||+++++++ +|++|+..+++. ...+++++++.||| +||+++
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id----~v~~g~~~~~~~-------------------~~~~a~~ia~~lgl~~~~p~~~ 87 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVS----EVIFGHVLAAGC-------------------GQNPVRQASVGAGIPYSVPAWS 87 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS-------------------CSCHHHHHHHHTTCCTTSCEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC-------------------CCHHHHHHHHHcCCCCCccEEE
Confidence 67999999999999999988876 588887655431 12478899999999 899999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hhhH------------------------------HHHH----
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PYVS------------------------------LQFA---- 234 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~~~------------------------------~~~~---- 234 (883)
|+++|+|++.||++|+++|++|+||++||||+|.+.. |... +...
T Consensus 88 v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~ 167 (397)
T 1wl4_A 88 CQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENV 167 (397)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHH
T ss_pred ecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHH
Confidence 9999999999999999999999999999999998763 2100 1100
Q ss_pred --------------------------hcCC------------------CCCCC------------CCCC-cccCCCCcc-
Q psy1120 235 --------------------------RLGV------------------LSPDG------------RCKS-FDEAANGYC- 256 (883)
Q Consensus 235 --------------------------~~~~------------------ls~~g------------~~~p-fd~~~~G~~- 256 (883)
..+. ++++. .||| ||.+++|++
T Consensus 168 ~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt 247 (397)
T 1wl4_A 168 AKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVT 247 (397)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCC
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEe
Confidence 0011 12343 5899 999999999
Q ss_pred ------cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 257 ------RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 257 ------~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
++||++++||++++.|+ +++++|+|++.+++.. .+.+.++..+++++|+++|++|+||||||.|
T Consensus 248 ~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p------~~~~~~~~~a~~~al~~Agl~~~dId~ie~~ 321 (397)
T 1wl4_A 248 PANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEP------SIMGIGPIPAIKQAVTKAGWSLEDVDIFEIN 321 (397)
T ss_dssp TTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG------GGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred chhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecCh------hhccchHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 99999999999999886 5899999999887531 1235678999999999999999999999988
Q ss_pred cCCCCCCcHHHH--HHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 327 GTGTKVGDPEEV--QALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 327 gtgt~~gD~~E~--~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
.+ .|. .++.+.|+- ...++++++.|.++||+.||+|+.++++++++|+++
T Consensus 322 d~-------f~~~~l~~~~~lg~-~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~ 373 (397)
T 1wl4_A 322 EA-------FAAVSAAIVKELGL-NPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM 373 (397)
T ss_dssp CS-------BHHHHHHHHHHHTC-CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cc-------cHHHHHHHHHHcCC-CCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc
Confidence 44 455 447788864 235789999999999999999999999999999885
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=293.52 Aligned_cols=236 Identities=17% Similarity=0.188 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Ccee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~ 188 (883)
.++|+++++++||+|||+++++++ ++++|+..+++. ...+++++++.+||+ ||++
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id----~~~~g~~~~~~~-------------------~~~~a~~ia~~lgl~~~~p~~ 83 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVN----EVILGQVLPAGE-------------------GQNPARQAAMKAGVPQEATAW 83 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS-------------------CSCHHHHHHHHTTCCTTSEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC-------------------CcHHHHHHHHHcCCCCCceEE
Confidence 457999999999999999988876 467776544321 124788999999998 9999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hhh------------------------------HHHHH---
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PYV------------------------------SLQFA--- 234 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~~------------------------------~~~~~--- 234 (883)
+|+++|+||+.||++|+++|++|+||++||||+|.+.. |.. .+...
T Consensus 84 ~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 163 (392)
T 2vu1_A 84 GMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAEN 163 (392)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHH
T ss_pred EecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHH
Confidence 99999999999999999999999999999999998654 210 00000
Q ss_pred ---h------------------------cCCCC----------CCCCCCCcccC--------------------CCCcc-
Q psy1120 235 ---R------------------------LGVLS----------PDGRCKSFDEA--------------------ANGYC- 256 (883)
Q Consensus 235 ---~------------------------~~~ls----------~~g~~~pfd~~--------------------~~G~~- 256 (883)
+ .|.+. ++| |+|||.+ ++|++
T Consensus 164 ~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~-~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt 242 (392)
T 2vu1_A 164 VAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG-DITVDADEYIRHGATLDSMAKLRPAFDKEGTVT 242 (392)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTC-CEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCC
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCC-ceeeccccccCCCCCHHHHhcCCCccCCCCCee
Confidence 0 00111 122 7899988 78999
Q ss_pred ------cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 257 ------RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 257 ------~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
++||++++||+++++|+ +++++|+|++.+++.. .+.+.++..+++++|+++|++|+||||||+|
T Consensus 243 ~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p------~~~~~~~~~a~~~al~~agl~~~dId~ie~~ 316 (392)
T 2vu1_A 243 AGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDP------KVMGTGPIPASRKALERAGWKIGDLDLVEAN 316 (392)
T ss_dssp SSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCG------GGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred CcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecCh------hhcchhHHHHHHHHHHHcCCCHHHcCEEEec
Confidence 99999999999999886 5899999999887532 1234578899999999999999999999998
Q ss_pred cCCCCCCcHHHHHH--HHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 327 GTGTKVGDPEEVQA--LENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 327 gtgt~~gD~~E~~A--i~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
|..|..+ +.+.|+- ..+++++++.|.++||+.||+|+.++++++++|+++
T Consensus 317 -------d~f~~~~l~~~~~lg~-~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~ 368 (392)
T 2vu1_A 317 -------EAFAAQACAVNKDLGW-DPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR 368 (392)
T ss_dssp -------CSBHHHHHHHHHHHCC-CGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH
T ss_pred -------cccHHHHHHHHHHcCC-CcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc
Confidence 6667766 4677763 235789999999999999999999999999999885
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-30 Score=288.36 Aligned_cols=236 Identities=18% Similarity=0.216 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCcee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~ 188 (883)
.++|+++++++||+|||+++++++ ++++|+..+++. ....++++++.||+ +||++
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id----~~~~g~~~~~~~-------------------~~~~a~~va~~lgl~~~~p~~ 88 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVK----EAYMGNVLQGGE-------------------GQAPTRQAVLGAGLPISTPCT 88 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS-------------------CSCHHHHHHHHTTCCTTCCEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-------------------CchHHHHHHHHcCCCCCceEE
Confidence 357999999999999999988876 477776544321 12468899999999 89999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh-------------------HHH-----------------
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV-------------------SLQ----------------- 232 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~-------------------~~~----------------- 232 (883)
+|+++|+|++.||++|+++|++|+||++||||+|.+..... +..
T Consensus 89 ~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~ 168 (395)
T 2ib8_A 89 TINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENT 168 (395)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHH
T ss_pred EecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHH
Confidence 99999999999999999999999999999999997543211 000
Q ss_pred HHhcC-------------------------------------------CCCCCCCCCC--ccc---------CCCCcc--
Q psy1120 233 FARLG-------------------------------------------VLSPDGRCKS--FDE---------AANGYC-- 256 (883)
Q Consensus 233 ~~~~~-------------------------------------------~ls~~g~~~p--fd~---------~~~G~~-- 256 (883)
..+.+ +++.|+.+++ ||. +++|++
T Consensus 169 ~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~ 248 (395)
T 2ib8_A 169 AKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTA 248 (395)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCT
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCccc
Confidence 01111 1222333333 665 568999
Q ss_pred -----cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q psy1120 257 -----RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHG 327 (883)
Q Consensus 257 -----~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hg 327 (883)
++||++++||++++.|+ +++++|+|++.++... .+.+.++..+++++|+++|++|+||||||.|
T Consensus 249 ~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p------~~~~~~~~~a~~~al~~Agl~~~dId~ie~~- 321 (395)
T 2ib8_A 249 ANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEP------IDFPIAPVYAASMVLKDVGLKKEDIAMWEVN- 321 (395)
T ss_dssp TTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCG------GGGGGHHHHHHHHHHHHHTCCGGGEEEEEEC-
T ss_pred ccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccCh------hhccccHHHHHHHHHHHcCCCHHHcCEEEEc-
Confidence 99999999999999886 5899999999765221 1234578999999999999999999999976
Q ss_pred CCCCCCcHHHHHHHHHh--hCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhc
Q psy1120 328 TGTKVGDPEEVQALENV--FCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMEN 383 (883)
Q Consensus 328 tgt~~gD~~E~~Ai~~~--f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~ 383 (883)
|+.|..+|..+ |+- ..+++++++.|.++||+.||+|+.++++++++|++
T Consensus 322 ------D~f~~~~l~~~e~lg~-~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 372 (395)
T 2ib8_A 322 ------EAFSLVVLANIKMLEI-DPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ 372 (395)
T ss_dssp ------CSBHHHHHHHHHHHTC-CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred ------cccHHHHHHHHHHcCC-CccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence 77788888877 753 23578999999999999999999999999999987
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=282.47 Aligned_cols=237 Identities=14% Similarity=0.158 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHHCC----CCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CC
Q psy1120 112 CRIILEKTYEAVIDAG----INPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NG 185 (883)
Q Consensus 112 ~rl~l~aa~eALedAG----~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~G 185 (883)
++|+++++++||+||| +++++++ +|++|+..+++. .+..+.++++.+|+ ++
T Consensus 36 ~~La~~Aa~~Al~~Ag~~~~l~~~~id----~v~~g~~~~~~~-------------------~~~~a~~va~~lGl~~~~ 92 (393)
T 1afw_A 36 DYLLYNFLNEFIGRFPEPLRADLNLIE----EVACGNVLNVGA-------------------GATEHRAACLASGIPYST 92 (393)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCC----CEEEECSSSBGG-------------------GHHHHHHHHHHTTCCTTS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCHHHCC----EEEEEecCCCCC-------------------CChHHHHHHHHcCCCCCc
Confidence 4689999999999999 9988887 489998665431 24578899999999 89
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh------------H------------HHHH-------
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV------------S------------LQFA------- 234 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~------------~------------~~~~------- 234 (883)
|+++|+++|+|++.||++|+++|++|+||++||||+|.+..... + +...
T Consensus 93 p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~ 172 (393)
T 1afw_A 93 PFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAAN 172 (393)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHH
T ss_pred eEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997543111 0 0000
Q ss_pred -----------------------hcC---------------CCCCCCCCC------------C-cccCCCCcc-------
Q psy1120 235 -----------------------RLG---------------VLSPDGRCK------------S-FDEAANGYC------- 256 (883)
Q Consensus 235 -----------------------~~~---------------~ls~~g~~~------------p-fd~~~~G~~------- 256 (883)
+.+ .+++|+.+| | ||.++ |++
T Consensus 173 ~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~-G~vt~~~~~~ 251 (393)
T 1afw_A 173 FKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR-GTTTAGNASQ 251 (393)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----CCCBTTTBCC
T ss_pred hCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-CCeechhcCc
Confidence 001 134555544 5 87554 666
Q ss_pred cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~ 332 (883)
++||++++||++++.|+ +++++|+|++.+++... + .+.++..+++++|+++|++|+||||||+|+++|.
T Consensus 252 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~---~~~~~~~a~~~al~~Agl~~~dId~ve~h~~ft~- 324 (393)
T 1afw_A 252 VSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPE---I---MGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA- 324 (393)
T ss_dssp BEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGG---G---GGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-
T ss_pred ccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChh---h---cchhHHHHHHHHHHHcCCCHHHCCEEEEeccCHH-
Confidence 79999999999999986 58999999999988521 2 2457789999999999999999999999999995
Q ss_pred CcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 333 GDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 333 gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
.|+.+++. |+- ...++++.+.+..+||+.||+|+..+++++++|+++
T Consensus 325 ---~~l~~~~~-lg~-~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~ 371 (393)
T 1afw_A 325 ---QALYCIHK-LGI-DLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD 371 (393)
T ss_dssp ---HHHHHHHH-HTC-CGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT
T ss_pred ---HHHHHHHH-hCC-CCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhc
Confidence 67777654 542 224667777777899999999999999999999886
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-29 Score=283.74 Aligned_cols=237 Identities=15% Similarity=0.206 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCcee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~ 188 (883)
.++|+++++++||+|||+++++++ +|++|+..+++. ....+..+++.+|+ ++|++
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id----~v~~g~~~~~~~-------------------~~~~a~~~a~~lGl~~~~p~~ 111 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLG----DICVGNVLQPGA-------------------GAIMARIAQFLSDIPETVPLS 111 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----CEEEECSSSBGG-------------------GHHHHHHHHHHTTCCTTSCEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCccc-------------------cccHHHHHHHHcCCCCCceEE
Confidence 467999999999999999998887 489998665432 12456677899999 79999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh---------------------HHHH--------------
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV---------------------SLQF-------------- 233 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~---------------------~~~~-------------- 233 (883)
+|+++|+|++.||++|+++|++|+||++||||+|.+..... .+.+
T Consensus 112 ~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~gitre 191 (418)
T 2iik_A 112 TVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISRE 191 (418)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTTCCHH
T ss_pred EeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999998754210 0100
Q ss_pred ---------------H-hcC-----------------------CCCCCCCCCC-------------cccCC-----CCcc
Q psy1120 234 ---------------A-RLG-----------------------VLSPDGRCKS-------------FDEAA-----NGYC 256 (883)
Q Consensus 234 ---------------~-~~~-----------------------~ls~~g~~~p-------------fd~~~-----~G~~ 256 (883)
. ..+ .+++|+.||| ||.++ ||+.
T Consensus 192 ~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~ 271 (418)
T 2iik_A 192 KQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQ 271 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCC
T ss_pred HHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccC
Confidence 0 011 2455778999 99875 9999
Q ss_pred cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKV 332 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~ 332 (883)
++||++++||++++.|+ +|+++|+|++.+++.. .+ .+.++..+++++|++||++|+||||||+|++++ .
T Consensus 272 ~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p---~~---~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~-~ 344 (418)
T 2iik_A 272 VSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPP---DI---MGIGPAYAIPVALQKAGLTVSDVDIFEINEAFA-S 344 (418)
T ss_dssp CEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCG---GG---GGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBH-H
T ss_pred CCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCc---hh---cchhHHHHHHHHHHHcCCCHHHCCeeeeeccch-H
Confidence 99999999999999886 5999999999876431 11 245788999999999999999999999998655 6
Q ss_pred CcHHHHHHHHHhhCCCCCCCeeecccC--CCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 333 GDPEEVQALENVFCPGRTTPLLIGSVK--SNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 333 gD~~E~~Ai~~~f~~~~~~~~~igs~K--~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
+|.+|.++|. |. +.+|+..+ .++||+.||+|+..+++++++|+++
T Consensus 345 ~~~~~~~~lg--~~-----~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~ 391 (418)
T 2iik_A 345 QAAYCVEKLR--LP-----PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR 391 (418)
T ss_dssp HHHHHHHHHT--CC-----GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC--CC-----ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc
Confidence 8999988875 21 22455555 5799999999999999999999874
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-29 Score=282.23 Aligned_cols=238 Identities=16% Similarity=0.208 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
.+|+++++++||+|||+++++++ +|++|+..+++.. .+.++.++++.+|+ ++|+++
T Consensus 56 ~~La~~Aa~~AL~dAGl~~~~Id----~vi~g~~~~~~~~------------------~~~~a~~va~~lGl~~~~p~~~ 113 (442)
T 2wu9_A 56 DDLLAPVLRALIEKTNLNPSEVG----DIVVGTVLAPGSQ------------------RASECRMAAFYAGFPETVAVRT 113 (442)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----CEEEECCSSBHHH------------------HHHHHHHHHHHTTCCTTSCEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCccCC------------------CChHHHHHHHHcCCCCCceEEE
Confidence 56899999999999999988887 4899987654321 13578899999999 899999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hh-------------hH-------HHH---------------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PY-------------VS-------LQF--------------- 233 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~-------------~~-------~~~--------------- 233 (883)
|+++|+|++.||++|+++|++|+||++||||+|.+.. |. .+ +..
T Consensus 114 v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~ 193 (442)
T 2wu9_A 114 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQE 193 (442)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHH
T ss_pred eCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHH
Confidence 9999999999999999999999999999999997654 11 00 000
Q ss_pred -------H--------hcCCCCC------------------------CC------------CCCC-cccCCCCcc-----
Q psy1120 234 -------A--------RLGVLSP------------------------DG------------RCKS-FDEAANGYC----- 256 (883)
Q Consensus 234 -------~--------~~~~ls~------------------------~g------------~~~p-fd~~~~G~~----- 256 (883)
+ ..|.+.. |. .+|| ||. +|++
T Consensus 194 ~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~--~G~vt~~n~ 271 (442)
T 2wu9_A 194 QDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK--DGTTTAGNS 271 (442)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT--TCCCCGGGB
T ss_pred HHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC--CCCeechhc
Confidence 0 0223321 22 3345 775 6887
Q ss_pred --cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC
Q psy1120 257 --RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330 (883)
Q Consensus 257 --~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt 330 (883)
++||++++||++++.|+ +++++|+|++.+++... + .+.++..+++++|++||++|+||||||+|+++|
T Consensus 272 s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~---~---~~~~~~~A~~~Al~~AGl~~~DId~iE~h~aft 345 (442)
T 2wu9_A 272 SQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPA---I---MGIGPAVAIPAAVKAAGLELDDIDLFEINEAFA 345 (442)
T ss_dssp CCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGG---G---GGGHHHHHHHHHHHHTTCCGGGCCEEEECCSBH
T ss_pred CCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCch---h---cchHHHHHHHHHHHHcCCCHHHCCEEEEeCCCh
Confidence 59999999999999986 58999999999887421 2 245788999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCC
Q psy1120 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGI 385 (883)
Q Consensus 331 ~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ 385 (883)
. .|+.+++. |+- ...++++.+.+..+||+.||+|+..+++++++|+++.
T Consensus 346 ~----~~l~~~~~-lG~-~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~ 394 (442)
T 2wu9_A 346 S----QFVYCRNK-LGL-DPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG 394 (442)
T ss_dssp H----HHHHHHHH-HTC-CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred H----HHHHHHHH-hCC-CCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC
Confidence 6 68888754 542 1245666666667999999999999999999999874
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=283.86 Aligned_cols=239 Identities=19% Similarity=0.253 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCcee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~ 188 (883)
...|+++++++||+|||+++++++ +|++|+..+++. ....+.++++.+|+ ++|++
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id----~v~~g~~~~~~~-------------------~~~~a~~i~~~lGl~~~~p~~ 85 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD----EVILGHCIQRTD-------------------EANTARTAALAAGFPDTVTGY 85 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECSSCCGG-------------------GCSHHHHHHHHTTCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC----EEEEEEccCCCc-------------------cchHHHHHHHHcCCCCCceEE
Confidence 346999999999999999999987 588887655431 12357889999999 58999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH-------------------------------------
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL------------------------------------- 231 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~------------------------------------- 231 (883)
+|+++|+|++.||++|+++|++|+||++||+|+|.+.......
T Consensus 86 ~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 165 (394)
T 3ss6_A 86 TIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAEN 165 (394)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHH
T ss_pred EecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHH
Confidence 9999999999999999999999999999999999866422100
Q ss_pred ------------------HHH------hcC------------------CCCCCCCCCC-------------ccc-----C
Q psy1120 232 ------------------QFA------RLG------------------VLSPDGRCKS-------------FDE-----A 251 (883)
Q Consensus 232 ------------------~~~------~~~------------------~ls~~g~~~p-------------fd~-----~ 251 (883)
... ..| ++++++.+|+ |+. .
T Consensus 166 ~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~ 245 (394)
T 3ss6_A 166 LVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTA 245 (394)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBS
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceec
Confidence 000 000 3567777775 763 3
Q ss_pred CCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q psy1120 252 ANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHG 327 (883)
Q Consensus 252 ~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hg 327 (883)
.|+..++||++++||+++++|+ +++++|+|++.++.... +.+.++..+++++|+++|++|+||||||+|.
T Consensus 246 ~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~------~~~~~~~~a~~~al~~agl~~~dId~ve~~d 319 (394)
T 3ss6_A 246 GNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPK------IMGIGPAPAIRKGLEKVDWSLEDADLLEINE 319 (394)
T ss_dssp TTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGG------GGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred CccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCc------cchHHHHHHHHHHHHHcCCCHHHcCEEEeCC
Confidence 6788889999999999999886 59999999999874321 2345689999999999999999999999996
Q ss_pred CCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 328 TGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 328 tgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
+.+ +|..++.+.|+- ...++++++.|.++||+.||||+.++++++++|+++
T Consensus 320 ~fa-----~~~~~~~~~lg~-~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~ 370 (394)
T 3ss6_A 320 AFA-----AQYLAVEKELDL-DREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR 370 (394)
T ss_dssp SBH-----HHHHHHHHHHTC-CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred chH-----HHHHHHHHHhCC-CCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc
Confidence 643 699999999863 245789999999999999999999999999999875
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-29 Score=281.33 Aligned_cols=238 Identities=18% Similarity=0.217 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
..|+++++++||+|||+++++++ +|++|+..+++. ....+.++++.+|+ ++|+++
T Consensus 32 ~~L~~~A~~~AL~~agl~~~dId----~vi~g~~~~~~~-------------------~~~~a~~v~~~lGl~~~~p~~~ 88 (396)
T 4dd5_A 32 VELGVTAAKEAIKRANITPDMID----ESLLGGVLTAGL-------------------GQNIARQIALGAGIPVEKPAMT 88 (396)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCC----EEEEECSCCTTS-------------------CSCHHHHHHHHTTCCTTSCEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCCCC-------------------CchHHHHHHHHcCCCCCceEEE
Confidence 46899999999999999999987 589987655431 12467899999999 589999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH--------------------------------------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL-------------------------------------- 231 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~-------------------------------------- 231 (883)
|+++|+|++.||+.|+++|++|+||.+||+|+|.+.......
T Consensus 89 v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 168 (396)
T 4dd5_A 89 INIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAEN 168 (396)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHH
T ss_pred eccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHH
Confidence 999999999999999999999999999999999876521100
Q ss_pred ------------------HH------HhcC------------------CCCCCCCCCC-------------cc-----cC
Q psy1120 232 ------------------QF------ARLG------------------VLSPDGRCKS-------------FD-----EA 251 (883)
Q Consensus 232 ------------------~~------~~~~------------------~ls~~g~~~p-------------fd-----~~ 251 (883)
.. ...| .+++|..+|+ |+ ..
T Consensus 169 ~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~ 248 (396)
T 4dd5_A 169 IAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTA 248 (396)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBT
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeec
Confidence 00 0001 1345555553 44 23
Q ss_pred CCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q psy1120 252 ANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHG 327 (883)
Q Consensus 252 ~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hg 327 (883)
.|+..++||++++||+++++|+ +++++|+|++.+++... +.+.++..+++++|+++|++|+||||||+|.
T Consensus 249 ~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~------~~~~~~~~a~~~al~~Agl~~~dId~ve~~d 322 (396)
T 4dd5_A 249 GNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPK------IMGYGPVPATKKALEAANMTIEDIDLVEANE 322 (396)
T ss_dssp TTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGG------GGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred CCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCC------cccHHHHHHHHHHHHHcCCCHHHcCEEEecC
Confidence 6777889999999999999886 58999999999886422 3345789999999999999999999999997
Q ss_pred CCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 328 TGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 328 tgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
+++ +|..++.+.|+- ...++++++.|.++||++||||+.+++|++++|+++
T Consensus 323 ~f~-----~~~~~~~~~lg~-~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~ 373 (396)
T 4dd5_A 323 AFA-----AQSVAVIRDLNI-DMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR 373 (396)
T ss_dssp SBH-----HHHHHHHHHHTC-CTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hHH-----HHHHHHHHHhCC-CCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc
Confidence 754 688888888864 346799999999999999999999999999999875
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-29 Score=281.19 Aligned_cols=243 Identities=17% Similarity=0.165 Sum_probs=191.1
Q ss_pred ChHHHHHHHHHHHHHHHC-CCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CC
Q psy1120 109 DPMCRIILEKTYEAVIDA-GINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NG 185 (883)
Q Consensus 109 dp~~rl~l~aa~eALedA-G~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~G 185 (883)
.+.++|+++++++||+|| |+++++++ +|++|+..+++.. ...++.++++.+|+ ++
T Consensus 25 ~~~~~L~~~a~~~Al~~a~gi~~~~Id----~v~~g~~~~~~~~------------------~~~~a~~~~~~~Gl~~~~ 82 (387)
T 3goa_A 25 VRAEDLSAHLMRSLLARNPSLTAATLD----DIYWGCVQQTLEQ------------------GFNIARNAALLAEIPHSV 82 (387)
T ss_dssp SCHHHHHHHHHHHHHHHCTTSCGGGCC----EEEEECSCCSBTT------------------TTTHHHHHHHHTTCCTTS
T ss_pred CCHHHHHHHHHHHHHHhccCCCHHHcC----EEEEEcccCCccc------------------ccHHHHHHHHHcCCCCCC
Confidence 456789999999999999 99999987 5899876554310 12467889999999 68
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhH-----------------------------------
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVS----------------------------------- 230 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~----------------------------------- 230 (883)
|+++|+++|+|++.||++|+++|++|+||++||+|+|.++.....
T Consensus 83 p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tr 162 (387)
T 3goa_A 83 PAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISR 162 (387)
T ss_dssp CCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCH
T ss_pred cEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCH
Confidence 999999999999999999999999999999999999987653211
Q ss_pred ---HHH-----------Hhc-------------------CCCCCCCCCCC-------------ccc------CCCCcccc
Q psy1120 231 ---LQF-----------ARL-------------------GVLSPDGRCKS-------------FDE------AANGYCRS 258 (883)
Q Consensus 231 ---~~~-----------~~~-------------------~~ls~~g~~~p-------------fd~------~~~G~~~g 258 (883)
..+ ... ..+++|+.+|+ |+. ..|+..++
T Consensus 163 e~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~ 242 (387)
T 3goa_A 163 EMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALS 242 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCE
T ss_pred HHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcC
Confidence 000 000 12344555554 665 36778899
Q ss_pred cceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCc
Q psy1120 259 EAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGD 334 (883)
Q Consensus 259 EGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD 334 (883)
||++++||+++++|+ +++++|+|++.++++... ...++..+++++|+++|++|+||||||+|+++|.
T Consensus 243 dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~------~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~--- 313 (387)
T 3goa_A 243 DGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSI------MGYGPVPASKLALKKAGLSASDIDVFEMNEAFAA--- 313 (387)
T ss_dssp EEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTS------TTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH---
T ss_pred ccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCc------chHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchH---
Confidence 999999999999886 589999999999986432 2235689999999999999999999999999885
Q ss_pred HHHHHHHHHhhCC--CCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 335 PEEVQALENVFCP--GRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 335 ~~E~~Ai~~~f~~--~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
.|...+ +.|+- ....++++.+.|..+||++||+|+.++++++++|+++
T Consensus 314 -~~~~~~-~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~ 363 (387)
T 3goa_A 314 -QILPCI-KDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK 363 (387)
T ss_dssp -HHHHHH-HHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHH-HHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc
Confidence 344444 33432 1224677888888899999999999999999999974
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=277.61 Aligned_cols=239 Identities=19% Similarity=0.235 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCcee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~ 188 (883)
...|+++++++||+|||+++++++ +|++|+..+++. ....+.++++.+|+ ++|++
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id----~v~~g~~~~~~~-------------------~~~~a~~~~~~lGl~~~~p~~ 85 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID----EVIIGNVLQTGL-------------------GQNVARQIAINAGIPNSVPSY 85 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECCCCSST-------------------TCCHHHHHHHHTTCCTTSCEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-------------------cchHHHHHHHHcCCCCCceEE
Confidence 346999999999999999999987 588887654321 12367889999999 68999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHH--------------------------------H----
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSL--------------------------------Q---- 232 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~--------------------------------~---- 232 (883)
+|+++|+|++.||+.|+++|++|+||.+||+|+|.+....... +
T Consensus 86 ~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~ 165 (395)
T 4e1l_A 86 TVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAE 165 (395)
T ss_dssp EECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHH
T ss_pred EccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHH
Confidence 9999999999999999999999999999999999877632210 0
Q ss_pred ------------------H--H------hcC-------------------CCCCCCCCCC-------------cc-----
Q psy1120 233 ------------------F--A------RLG-------------------VLSPDGRCKS-------------FD----- 249 (883)
Q Consensus 233 ------------------~--~------~~~-------------------~ls~~g~~~p-------------fd----- 249 (883)
. . ..| .+.+++.+|+ |+
T Consensus 166 ~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~ 245 (395)
T 4e1l_A 166 NIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTV 245 (395)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCe
Confidence 0 0 000 2455666654 54
Q ss_pred cCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEE
Q psy1120 250 EAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEA 325 (883)
Q Consensus 250 ~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~ 325 (883)
...|+..++||++++||+++++|+ +++++|+|++.+++... +.+.++..+++++|+++|++|+||||||+
T Consensus 246 t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~------~~~~~~~~ai~~al~~agl~~~dId~ve~ 319 (395)
T 4e1l_A 246 TAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPE------VMGTGPIPATRKALKKAGLSINDIDLIEA 319 (395)
T ss_dssp BTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGG------GTTCTHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred eCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCC------cchHHHHHHHHHHHHHcCCCHHHcCEEEe
Confidence 235777889999999999999886 58999999999886432 22345889999999999999999999999
Q ss_pred ecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 326 HGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 326 hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
|.+.+ +|..++.+.|+- ...++++++.|.++||++||||+.++++++++|+++
T Consensus 320 ~d~fa-----~~~~~~~~~lg~-~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~ 372 (395)
T 4e1l_A 320 NEAFA-----AQALAVKNELQI-DSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR 372 (395)
T ss_dssp CCSBH-----HHHHHHHHHHTC-CGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH
T ss_pred cChhH-----HHHHHHHHHhCC-CCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc
Confidence 86543 688888888863 245789999999999999999999999999999875
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=277.15 Aligned_cols=238 Identities=19% Similarity=0.196 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
.+|+++++++||+|||+++++++ +|++|+..+++. ..+..+.++++.+|+ ++|+++
T Consensus 27 ~~L~~~Aa~~Al~dAgl~~~~id----~v~~g~~~~~~~------------------~~~~~a~~va~~lGl~~~~p~~~ 84 (401)
T 1ulq_A 27 DDLLAHALSVLVDRSGVPKEEVE----DVYAGCANQAGE------------------DNRNVARMALLLAGFPVEVAGCT 84 (401)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSST------------------TTTTHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCCC------------------CCChHHHHHHHHhCCCCCccEee
Confidence 56999999999999999988876 699998765532 014578999999999 799999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC-hhh--------------H----------HHHH--h-------
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH-PYV--------------S----------LQFA--R------- 235 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~-~~~--------------~----------~~~~--~------- 235 (883)
|+++|+|++.||++|+++|++|+||++||||+|.+.. |.. + ..+. .
T Consensus 85 v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 164 (401)
T 1ulq_A 85 VNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMG 164 (401)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHH
T ss_pred ccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHH
Confidence 9999999999999999999999999999999997654 210 0 0110 0
Q ss_pred ---------------------------------cCC------------------CCCCC------------CCCC-cccC
Q psy1120 236 ---------------------------------LGV------------------LSPDG------------RCKS-FDEA 251 (883)
Q Consensus 236 ---------------------------------~~~------------------ls~~g------------~~~p-fd~~ 251 (883)
.|. +++|. .+|| ||.
T Consensus 165 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~- 243 (401)
T 1ulq_A 165 ETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFRE- 243 (401)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSST-
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCC-
Confidence 011 12232 2456 775
Q ss_pred CCCcc-------cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy1120 252 ANGYC-------RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNL 320 (883)
Q Consensus 252 ~~G~~-------~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI 320 (883)
+|++ ++||++++||+++++|+ +++++|+|++.+++... . .+.++..+++++|+++|++|+||
T Consensus 244 -~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~---~~~~~~~a~~~al~~Agl~~~dI 316 (401)
T 1ulq_A 244 -GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPR---I---MGIGPVPATRKALERAGLSFSDL 316 (401)
T ss_dssp -TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGG---G---GGGTHHHHHHHHHHHTTCCGGGC
T ss_pred -CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCcc---c---cchhHHHHHHHHHHHcCCCHHHc
Confidence 6887 69999999999999886 58999999999988532 1 23567899999999999999999
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHhhCC-CCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 321 AWIEAHGTGTKVGDPEEVQALENVFCP-GRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 321 ~~ve~hgtgt~~gD~~E~~Ai~~~f~~-~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
||||+|.++|. .|+..++. |+- .+..++++.+.|..+||+.||+|+..+++++++|+++
T Consensus 317 d~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~ 376 (401)
T 1ulq_A 317 GLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR 376 (401)
T ss_dssp SEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc
Confidence 99999999884 57777655 432 1235677888888899999999999999999999987
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-28 Score=264.60 Aligned_cols=263 Identities=16% Similarity=0.248 Sum_probs=195.4
Q ss_pred cEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 34 EICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 34 ~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++.|+|+|+.+|.. .+.+++++.+. . .+.|-. ..+||..+.....++..
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~------~~~~i~----------------------~~~Gi~~r~~~~~~~~~ 51 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIVD--T------SDEWIT----------------------TRTGIKERRIAKEETIT 51 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTSS--C------CHHHHH----------------------HHHCCCEEEECSSCCHH
T ss_pred ceEEEEEEEECCCceEcHHHHHHHcC--C------CHHHHH----------------------HHhCceeeeecCCCCHH
Confidence 48999999999986 46777765431 0 011110 11223322221126789
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeeec
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTVD 191 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv~ 191 (883)
+|+++++++||+|||+++++++ +|++|+..+++. .++ .+.+++..+|+++ |+++|+
T Consensus 52 ~l~~~a~~~al~~ag~~~~~id----~v~~~~~~~~~~------------------~~~-~a~~v~~~lgl~~~~~~~v~ 108 (309)
T 2ebd_A 52 YMATQAAKEALREANLSPEELD----LIILATLTPQKR------------------FPS-TACLVQAQLKAKGVYAFDIS 108 (309)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCS----EEEEECSSCSSS------------------SSC-HHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCc-HHHHHHHHhCCCCceEEecC
Confidence 9999999999999999988876 699998654321 112 6789999999998 999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccccc
Q psy1120 192 SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKD 271 (883)
Q Consensus 192 tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~ 271 (883)
++|+|++.||+.|+++|++|++|.+||+|+|.+... + .|+.+.+|+++||||+++||++.++
T Consensus 109 ~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~-------~~~~~~~~~~~gdGaaA~vL~~~~~ 170 (309)
T 2ebd_A 109 AACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEA-----------V-------DWEDRSTCVLFGDGAGAVVVTRSED 170 (309)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGT-----------C-------CTTCTTTTTTBCEEEEEEEEEECSS
T ss_pred ccchHHHHHHHHHHHHHHCCCCCEEEEEEecccccc-----------c-------CccchhhccccccccEEEEEEecCC
Confidence 999999999999999999999999999999985321 1 1334678999999999999999887
Q ss_pred ccceeEEEEeeeeccCCCCCCCCCCC-------CHH--------HHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHH
Q psy1120 272 AKRVYARVVHAKTNCDGYKEQGITYP-------SGA--------LQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPE 336 (883)
Q Consensus 272 A~~i~a~I~g~~~~~dg~~~~~~~~p-------~~~--------~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~ 336 (883)
+.++++.+ .++||.....++.| ++. .+.++++++|+++|++|+|||||++|+++|+..|
T Consensus 171 ~~~i~~~~----~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~-- 244 (309)
T 2ebd_A 171 KSDILATR----MYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIIN-- 244 (309)
T ss_dssp SCEEEEEE----EEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHH--
T ss_pred CCceeEEE----EEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHH--
Confidence 75555544 33444222223333 444 7889999999999999999999999999998655
Q ss_pred HHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHH
Q psy1120 337 EVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVIL 379 (883)
Q Consensus 337 E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l 379 (883)
++.+.|+-. .++++ +.|.++||+.+|+++..|.+++.
T Consensus 245 ---~~~~~lg~~-~~~~~--~~~~~~Gh~~~As~~~~L~~~~~ 281 (309)
T 2ebd_A 245 ---ALAEKLNIP-KEKVF--VNIQKYGNTSAASIPIALHEAIK 281 (309)
T ss_dssp ---HHHHHTTCC-GGGBC--CCHHHHCBCGGGHHHHHHHHHHH
T ss_pred ---HHHHHhCCC-HHHhh--hhHhhhcchHHHHHHHHHHHHHH
Confidence 466777532 12333 56899999999999999987753
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=267.18 Aligned_cols=271 Identities=15% Similarity=0.240 Sum_probs=198.8
Q ss_pred cEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhh-cCChH
Q psy1120 34 EICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAH-TMDPM 111 (883)
Q Consensus 34 ~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~-~~dp~ 111 (883)
++.|+|+|+.+|.. .+.+++++.+. . .+.|- ...+||..|... ..++.
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~------~~~~i----------------------~~~~Gi~~r~~~~~~~~~ 51 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMVD--T------SDEWI----------------------VTRTGIRERHIAAPNETV 51 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTSS--C------CHHHH----------------------HHHHCCCEEEECCTTCCH
T ss_pred CcEEEEEEEeCCCceecHHHHHHHhC--C------CHHHH----------------------HHHhCceEEEecCCCCCH
Confidence 48899999999986 56777775431 0 01111 123455544432 46788
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~tv 190 (883)
.+|+++++++||+|||+++++++ +|++|+..+++. ...++.++++.||++ +|+++|
T Consensus 52 ~~l~~~a~~~al~~ag~~~~~id----~vi~g~~~~~~~-------------------~~~~a~~v~~~lgl~~~~~~~v 108 (317)
T 1hnj_A 52 STMGFEAATRAIEMAGIEKDQIG----LIVVATTSATHA-------------------FPSAACQIQSMLGIKGCPAFDV 108 (317)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSCS-------------------SSCHHHHHHHHHTCCSSCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC-------------------CCcHHHHHHHHhCCCCCeEEee
Confidence 99999999999999999988776 688887654321 124688999999997 899999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
+++|+|++.||+.|+++|++|++|.+||+|+|.+... +. |+.+.+|+++||||+++||++.+
T Consensus 109 ~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~~-------~~d~~~~~~~GdGA~A~vL~~~~ 170 (317)
T 1hnj_A 109 AAACAGFTYALSVADQYVKSGAVKYALVVGSDVLART-----------CD-------PTDRGTIIIFGDGAGAAVLAASE 170 (317)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHH-----------SC-------TTCHHHHTTBCCEEEEEEEEEES
T ss_pred CcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhccc-----------CC-------chhcccceeeccccEEEEEEecC
Confidence 9999999999999999999999999999999974321 11 23344699999999999999876
Q ss_pred cccceeEEEEee-eeccCCCCCC----------CCCCCCHH--------HHHHHHHHHHHHcCCCCCCccEEEEecCCCC
Q psy1120 271 DAKRVYARVVHA-KTNCDGYKEQ----------GITYPSGA--------LQQRLLEDFYSECEVDPKNLAWIEAHGTGTK 331 (883)
Q Consensus 271 ~A~~i~a~I~g~-~~~~dg~~~~----------~~~~p~~~--------~~~~~i~~al~~agl~~~dI~~ve~hgtgt~ 331 (883)
+ .++++.+.+. +...+..+.. .+..+++. .+.++|+++|+++|++++|||||++|++||+
T Consensus 171 ~-~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~ 249 (317)
T 1hnj_A 171 E-PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLR 249 (317)
T ss_dssp S-CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHH
T ss_pred C-CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence 5 4677777552 2212211100 01113454 7889999999999999999999999999999
Q ss_pred CCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCC
Q psy1120 332 VGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIP 387 (883)
Q Consensus 332 ~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ip 387 (883)
..| ++.+.|+-.. .+ +.+.|.++||+.+||+...|..++ +++.+.
T Consensus 250 ~~d-----~i~~~lg~~~-~~--~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~~ 294 (317)
T 1hnj_A 250 IIS-----ATAKKLGMSM-DN--VVVTLDRHGNTSAASVPCALDEAV---RDGRIK 294 (317)
T ss_dssp HHH-----HHHHHTTCCG-GG--BCCCHHHHCBCGGGHHHHHHHHHH---HTTCSC
T ss_pred HHH-----HHHHHcCCCH-HH--hHhhHhhhCcHHHHHHHHHHHHHH---HhCCCC
Confidence 766 4667775321 22 347899999999999998887663 455443
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-27 Score=261.77 Aligned_cols=271 Identities=13% Similarity=0.160 Sum_probs=195.9
Q ss_pred EEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhh-cCChHH
Q psy1120 35 ICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAH-TMDPMC 112 (883)
Q Consensus 35 iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~-~~dp~~ 112 (883)
+.|+|+|+.+|.. .+.+++++.+.. .+.|-. ..+||..|... .-++..
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~~~--------~~~~i~----------------------~~~Gi~~r~~~~~~~~~~ 51 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYLDT--------SDEWIV----------------------TRTGIKERRVAAEDEYTS 51 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTSSC--------CHHHHH----------------------HHTCCCEEEECCTTCCHH
T ss_pred cEEEEEEEECCCceecHHHHHHHhCC--------CHHHHH----------------------HhcCceEEeecCCCCCHH
Confidence 4799999999985 567777754311 011110 12334333322 235788
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeeecc
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDS 192 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv~t 192 (883)
+|+++++++||+|||+++++++ +|++|+..+++. . ...+.+++..+|+++|+++|++
T Consensus 52 ~la~~a~~~al~~ag~~~~~id----~vi~~~~~~~~~------------------~-~~~a~~v~~~lgl~~~~~~v~~ 108 (322)
T 1ub7_A 52 DLAFKAVEDLLRRHPGALEGVD----AVIVATNTPDAL------------------F-PDTAALVQARFGLKAFAYDLLA 108 (322)
T ss_dssp HHHHHHHHHHHHHSTTTTTTEE----EEEEECSSCSEE------------------E-SCHHHHHHHHTTCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------C-CcHHHHHHHHhCCCCEEEeeCc
Confidence 9999999999999999887764 588887654321 1 1267899999999999999999
Q ss_pred cchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccccc
Q psy1120 193 ACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKDA 272 (883)
Q Consensus 193 acsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~A 272 (883)
+|+|++.||+.|+++|++|++|.+||+|+|.+ ++.. .|+| +.+|+++||||+++||++.++.
T Consensus 109 aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~~----------------~~~d-~~~~~~~GdGA~A~vL~~~~~~ 170 (322)
T 1ub7_A 109 GCPGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKII----------------DWND-RATAVLFGDGGGAAVVGKVREG 170 (322)
T ss_dssp STTHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGTS----------------CTTC-HHHHTTBCCEEEEEEEECCCTT
T ss_pred cchHHHHHHHHHHHHHHcCCCCEEEEEEechh-cccc----------------Chhh-cccceeeccccEEEEEEecCCC
Confidence 99999999999999999999999999999984 3211 2444 5689999999999999988765
Q ss_pred cceeEEE-EeeeeccCCCCCC--CCCCC-----------CH--------HHHHHHHHHHHHHcCCCCCCccEEEEecCCC
Q psy1120 273 KRVYARV-VHAKTNCDGYKEQ--GITYP-----------SG--------ALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330 (883)
Q Consensus 273 ~~i~a~I-~g~~~~~dg~~~~--~~~~p-----------~~--------~~~~~~i~~al~~agl~~~dI~~ve~hgtgt 330 (883)
.++++.+ .+.+...+..+.. +...| ++ ..+.++++++|+++|++++|||||++|+++|
T Consensus 171 ~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~ 250 (322)
T 1ub7_A 171 YGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANL 250 (322)
T ss_dssp CEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCH
T ss_pred CceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH
Confidence 5666655 3333222221100 00002 23 6789999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCC
Q psy1120 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIP 387 (883)
Q Consensus 331 ~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ip 387 (883)
+..| ++.+.|+-. .+++ -+.|.++||+.+||+...|.++ ++++.+.
T Consensus 251 ~~~d-----~~~~~lg~~-~~~~--~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~ 296 (322)
T 1ub7_A 251 RIID-----AARERLGLP-WERV--AVNVDRYGNTSTASIPLALKEA---VDAGRIR 296 (322)
T ss_dssp HHHH-----HHHHTTTCC-GGGB--CCCHHHHCBCGGGHHHHHHHHH---HHHTSSC
T ss_pred HHHH-----HHHHHcCCC-HHHH--HHHHHhhCcHHHHHHHHHHHHH---HHhCCCC
Confidence 9766 466777532 1223 3678999999999999987764 5666664
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=262.79 Aligned_cols=272 Identities=12% Similarity=0.148 Sum_probs=194.7
Q ss_pred CcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhh-cCCh
Q psy1120 33 DEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAH-TMDP 110 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~-~~dp 110 (883)
.++.|+|+|+.+|.. .+.+++|+.+.. .+.|- ..++||..|... ..++
T Consensus 10 ~~~~I~gig~~~P~~~~~~~~~~~~~~~--------~~~~i----------------------~~~~Gi~~R~~~~~~~~ 59 (339)
T 1mzj_A 10 RFSRVLGVGSYRPRREVSNKEVCTWIDS--------TEEWI----------------------ETRTGIRSRRIAEPDET 59 (339)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHTTTSSC--------CHHHH----------------------HHHHCCSEEECCCTTCC
T ss_pred CceEEEEEEEeCCCccccHHHHHHHhCC--------CHHHH----------------------HHhcCceEEEEeCCCCC
Confidence 579999999999986 567888765421 11121 122445444332 2567
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~t 189 (883)
.++|+++++++||+|||+++++++ +|++|+..+++. .+ ..++++++.||++ +|+++
T Consensus 60 ~~~la~~Aa~~al~~ag~~~~~id----~vi~gt~~~~~~------------------~p-~~a~~v~~~lgl~~~~~~~ 116 (339)
T 1mzj_A 60 IQVMGVAASRRALEHAGVDPAEID----LVVVSTMTNFVH------------------TP-PLSVAIAHELGADNAGGFD 116 (339)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCC------------------SS-CHHHHHHHHHTCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC------------------CC-hHHHHHHHHhCCCCccEEE
Confidence 899999999999999999988876 689998765431 11 2678999999998 79999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+++|+|++.||+.|+++|++|++|.+||+|+|.+. +. +. ++.+.+|+++||||+++||++.
T Consensus 117 v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s-~~----------~~-------~~d~~~~~~~GdGA~A~vL~~~ 178 (339)
T 1mzj_A 117 LSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-DV----------ID-------LADRSLSFLFGDGAGAAVVGPS 178 (339)
T ss_dssp EECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-GG----------SC-------SSCTTTTTTBCEEEEEEEEEEE
T ss_pred ccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------cC-------ccccccceEeccCceEEEEEec
Confidence 999999999999999999999999999999999843 32 11 1235679999999999999987
Q ss_pred ccccceeEEE-EeeeeccCCCCCCC--------------CCCCCH--------HHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 270 KDAKRVYARV-VHAKTNCDGYKEQG--------------ITYPSG--------ALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 270 ~~A~~i~a~I-~g~~~~~dg~~~~~--------------~~~p~~--------~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
+.+ ++++.. .+.+...+..+..+ +...++ ..+.++|+++|+++|++++|||||++|
T Consensus 179 ~~~-~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H 257 (339)
T 1mzj_A 179 DVP-GIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPH 257 (339)
T ss_dssp SSC-CBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEC
T ss_pred CCC-CeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 653 454432 22222111111000 000122 678899999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 327 GTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 327 gtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
++||+.+|. +.+.|+-....++. .+ ..++||+.+||+...|.+++ +++.+
T Consensus 258 ~~~~~~~d~-----i~~~lg~~~~~~~~-~~-~~~~Gn~~sAs~~~~L~~~~---~~g~~ 307 (339)
T 1mzj_A 258 QANLRIIDV-----LVDRLGVPEHVVVS-RD-AEDTGNTSSASVALALDRLV---RSGAV 307 (339)
T ss_dssp CSCHHHHHH-----HHHHHTCCTTSEEC-CT-HHHHCBCTTHHHHHHHHHHH---HHTSS
T ss_pred CCCHHHHHH-----HHHHhCCCccceee-eh-hhhcCchHHHHHHHHHHHHH---HcCCC
Confidence 999998874 55666532221333 33 46899999999999877664 44544
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=251.91 Aligned_cols=266 Identities=14% Similarity=0.204 Sum_probs=188.8
Q ss_pred cEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhh-cCChH
Q psy1120 34 EICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAH-TMDPM 111 (883)
Q Consensus 34 ~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~-~~dp~ 111 (883)
++.|+|+|+.+|.. .+.+++++.+. . .+.|-. ...||..+... .-++.
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~------~~~~i~----------------------~~~gi~~r~~~~~~~~~ 51 (313)
T 1zow_A 2 NVGIKGFGAYAPEKIIDNAYFEQFLD--T------SDEWIS----------------------KMTGIKERHWADDDQDT 51 (313)
T ss_dssp CEEEEEEEEECCSCEEEGGGGGGTSS--C------CHHHHH----------------------HHHCCSEEECCCTTCCH
T ss_pred ceEEEEEEEECCCccccHHHHHHhcC--C------CHHHHH----------------------HhhCceEEEecCCCCCH
Confidence 48899999999985 46666665331 0 011110 11222222211 23467
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~tv 190 (883)
.+|+++++++||+|||+++++++ +|++|+..+++. . ...+.+++..+|++ +|+++|
T Consensus 52 ~~l~~~a~~~al~~ag~~~~~id----~vi~~~~~~~~~--------------~-----~~~a~~v~~~lgl~~~~~~~v 108 (313)
T 1zow_A 52 SDLAYEASVKAIADAGIQPEDID----MIIVATATGDMP--------------F-----PTVANMLQERLGTGKVASMDQ 108 (313)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCS--------------S-----SCHHHHHHHHHTCCSCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC--------------C-----CcHHHHHHHHhCCCCCcEEEE
Confidence 89999999999999999988876 689987655421 0 12578999999998 699999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
+++|+|++.||+.|++.|++|++|.+||+|+|.+... .+|||. .+|+++|||++++||++.+
T Consensus 109 ~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------------~~~~d~-~~~~~~gdGa~A~vl~~~~ 170 (313)
T 1zow_A 109 LAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI-----------------TDLTDR-STAVLFGDGAGAVIIGEVS 170 (313)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT-----------------CCTTCH-HHHTTBCEEEEEEEEEECS
T ss_pred CCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc-----------------cCcccc-cceeeeccceEEEEEEecC
Confidence 9999999999999999999999999999999984332 134543 3799999999999999887
Q ss_pred cccceeEE-EEeeeeccCCCCCCC---CCCCCH--------HHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHH
Q psy1120 271 DAKRVYAR-VVHAKTNCDGYKEQG---ITYPSG--------ALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEV 338 (883)
Q Consensus 271 ~A~~i~a~-I~g~~~~~dg~~~~~---~~~p~~--------~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~ 338 (883)
+..++++. +.+.+...+..+... ...+++ ..+.++++++|+++|++++|||||++|+++|+.+|.+
T Consensus 171 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~-- 248 (313)
T 1zow_A 171 EGRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESA-- 248 (313)
T ss_dssp TTCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHH--
T ss_pred CCCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHH--
Confidence 65455543 333222222111000 000123 3788999999999999999999999999999988764
Q ss_pred HHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 339 QALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 339 ~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
.+.|+-. .++++ +.|.++||+.+|++...|.+++
T Consensus 249 ---~~~lg~~-~~~~~--~~~~~~Gh~~~as~~~~L~~~~ 282 (313)
T 1zow_A 249 ---RERLGIS-KDKMS--VSVNKYGNTSAASIPLSIDQEL 282 (313)
T ss_dssp ---HHHHTCC-GGGBC--CCHHHHCBCGGGHHHHHHHHHH
T ss_pred ---HHHhCCC-HHHHH--HhHhhhCchHHHHHHHHHHHHH
Confidence 4556532 22333 4689999999999999887754
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=253.71 Aligned_cols=240 Identities=13% Similarity=0.148 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCce
Q psy1120 111 MCRIILEKTYEAVID-AGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPS 187 (883)
Q Consensus 111 ~~rl~l~aa~eALed-AG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps 187 (883)
.+.|+++++++||+| ||+++++++ +|++|+..++.. ....++.++++.+|| ++|+
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId----~vi~g~~~~~~~------------------~~~~~a~~va~~lGlp~~~pa 89 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLIS----DMILGVVSPVGD------------------QGGDIARTAVLAAGLPETTGG 89 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEE----EEEEECC--------------------------CHHHHHHHHTTCCTTCEE
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCC----EEEEEecCcccc------------------ccCcHHHHHHHHcCCCCCCce
Confidence 456999999999999 999998887 588887543321 012467899999999 6899
Q ss_pred eeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhh--------------------HHHHH-------------
Q psy1120 188 YTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYV--------------------SLQFA------------- 234 (883)
Q Consensus 188 ~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~--------------------~~~~~------------- 234 (883)
++|+++|+|++.||+.|+++|++|+||++||+|+|.+..... .+++.
T Consensus 90 ~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re 169 (407)
T 3svk_A 90 VQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSRE 169 (407)
T ss_dssp EEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHH
T ss_pred EEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHH
Confidence 999999999999999999999999999999999998765211 00000
Q ss_pred -----------------hcC----------------CCCCCCCCCC-------------ccc------------------
Q psy1120 235 -----------------RLG----------------VLSPDGRCKS-------------FDE------------------ 250 (883)
Q Consensus 235 -----------------~~~----------------~ls~~g~~~p-------------fd~------------------ 250 (883)
+.+ .+.++..+|+ |+.
T Consensus 170 ~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~ 249 (407)
T 3svk_A 170 DVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWV 249 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCcccccccccccccccc
Confidence 001 2456666654 553
Q ss_pred --------CCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy1120 251 --------AANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPK 318 (883)
Q Consensus 251 --------~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~ 318 (883)
..|...++||++++||++++.|+ +++++|+|++.+++.... . ..+...+++++|+++|++|+
T Consensus 250 ~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~-----~~~~~~a~~~al~~Agl~~~ 323 (407)
T 3svk_A 250 EKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVI-M-----LTGPTPATRKVLDRAGLTID 323 (407)
T ss_dssp SSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-------C-----CCTHHHHHHHHHHHHTCCGG
T ss_pred ccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCcc-c-----cHHHHHHHHHHHHHcCCCHH
Confidence 35777899999999999999886 489999999998876432 1 12347899999999999999
Q ss_pred CccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 319 NLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 319 dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
||||||+|.+.|. .|...+ +.|+- ...++++.+.|..+||+.||+|+..+++++++|+++
T Consensus 324 dId~~e~hdaf~~----~~l~~~-~~lg~-~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~ 383 (407)
T 3svk_A 324 DIDLFELNEAFAS----VVLKFQ-KDLNI-PDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR 383 (407)
T ss_dssp GCSEEEECCSBHH----HHHHHH-HHHTC-CGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH
T ss_pred HCCEEEEeChhHH----HHHHHH-HHhCC-CCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc
Confidence 9999999998875 454444 44542 234788888898999999999999999999999874
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.2e-25 Score=241.32 Aligned_cols=265 Identities=14% Similarity=0.204 Sum_probs=190.0
Q ss_pred cEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 34 EICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 34 ~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++.|+|+|+.+|.. .+.+++|+.+.. .+.|-. ..+||..|.....++..
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~--------~~~~i~----------------------~~~Gi~~R~~~~~~~~~ 54 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAELDT--------SDAWIS----------------------SRTGVRQRHIAGDLGSG 54 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHTTC--------CHHHHH----------------------HHHCCCEEECCTTCCHH
T ss_pred eeEEEEEEEECCCcEecHHHHHHHhCC--------CHHHHH----------------------HhhCceEEEecCCCCHH
Confidence 58999999999986 577888876531 011211 12344443333237889
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceeeec
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYTVD 191 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~tv~ 191 (883)
+|+++++++||+|||+ ++++ +|++|+..+++. .+ ..+.+++..||++ +|+++|+
T Consensus 55 ~la~~Aa~~al~~ag~--~~id----~vi~~t~~~~~~------------------~p-~~a~~v~~~lgl~~~~~~~v~ 109 (331)
T 2x3e_A 55 DLALRAASAALASAGL--ERVD----AVVLATSTGDFC------------------CP-ATAPRVAARLGLVGALAFDLS 109 (331)
T ss_dssp HHHHHHHHHHHHHHTC--SCCS----EEEEECSSCSEE------------------ES-CSHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHHHHHHHhCCc--ccCC----EEEEEeCCCCCC------------------CC-hHHHHHHHHhCCCCCcEEEEc
Confidence 9999999999999999 5554 588887654321 01 2578999999998 8999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccccc
Q psy1120 192 SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSKD 271 (883)
Q Consensus 192 tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~ 271 (883)
++|+|++.||+.|++.|++|++|.+||+|+|.+. +.. . |+...+|+++||||+++||++.+.
T Consensus 110 ~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~~----------~-------~~d~~~~~~~GdGA~A~vL~~~~~ 171 (331)
T 2x3e_A 110 AAATGFVYGLASVGSLISAGLADSALLVGVDTFS-HTL----------D-------PADRSTRALFGDGAGAVVLRAGDA 171 (331)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GGS----------C-------TTCHHHHHHBCCEEEEEEEEEECT
T ss_pred CcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccc-cCC----------C-------ccccccceeeccccEEEEEEecCC
Confidence 9999999999999999999999999999999843 321 1 222357899999999999998774
Q ss_pred cc--ceeEEEEeeeeccCCCCCCCCCCC------------------CH--------HHHHHHHHHHHHHcCCCCCCccEE
Q psy1120 272 AK--RVYARVVHAKTNCDGYKEQGITYP------------------SG--------ALQQRLLEDFYSECEVDPKNLAWI 323 (883)
Q Consensus 272 A~--~i~a~I~g~~~~~dg~~~~~~~~p------------------~~--------~~~~~~i~~al~~agl~~~dI~~v 323 (883)
|. ++++ ....+||.....++.| ++ ..+.++++++|+++|++++|||||
T Consensus 172 a~~~~i~~----~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~ 247 (331)
T 2x3e_A 172 EEEGALLA----FDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHL 247 (331)
T ss_dssp TSTTBEEE----EEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred CCCCceEE----EEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 32 3443 3344444211122222 22 578899999999999999999999
Q ss_pred EEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 324 EAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 324 e~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
.+|+++|+..|. +.+.|+-. .++++. .+.++||+.+||....|..+ ++++.+
T Consensus 248 ~~H~~~~~~~d~-----~~~~lg~~-~~~~~~--~~~~~Gnt~sAs~~~~L~~~---~~~~~~ 299 (331)
T 2x3e_A 248 VPHQANTRILAA-----VADQLDLP-VERVVS--NIAEVGNTVAASIPLALAHG---LRQGIL 299 (331)
T ss_dssp EECCCCHHHHHH-----HHHHHTCC-GGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCS
T ss_pred EEcCCCHHHHHH-----HHHHcCCC-HHHHhh--hHhhhCcHHHHHHHHHHHHH---HHhCCC
Confidence 999999998775 55566532 223332 34789999999988777654 455544
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-24 Score=240.16 Aligned_cols=263 Identities=13% Similarity=0.177 Sum_probs=186.8
Q ss_pred CcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhc-CCh
Q psy1120 33 DEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHT-MDP 110 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~-~dp 110 (883)
.++.|+|+|+.+|.. .+.+++|+.+.. .+.| ...++||..|.... .++
T Consensus 11 ~~~~I~g~g~~~P~~~~~~~~~~~~~~~--------~~~~----------------------i~~~~gi~~r~~~~~~~~ 60 (335)
T 1u6e_A 11 RSVGLLSVGAYRPERVVTNDEICQHIDS--------SDEW----------------------IYTRTGIKTRRFAADDES 60 (335)
T ss_dssp SCEEEEEEEEECCSEEEEHHHHTTSSSC--------CHHH----------------------HHHHHCCSEEEECCTTCC
T ss_pred CceEEEEEEEECCCceecHHHHHHHhCC--------CHHH----------------------HHHhcCCceEeecCCCCC
Confidence 469999999999986 567788764311 0111 11234555544332 567
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~t 189 (883)
..+|+++++++||+|||+++++++ +|++|+..+++.. ...+.+++..||++ +|+++
T Consensus 61 ~~~la~~A~~~al~~ag~~~~~id----~vi~~t~~~~~~~-------------------~~~a~~v~~~lgl~~~~~~~ 117 (335)
T 1u6e_A 61 AASMATEACRRALSNAGLSAADID----GVIVTTNTHFLQT-------------------PPAAPMVAASLGAKGILGFD 117 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCSS-------------------SCHHHHHHHHHTCTTSEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC-------------------ChHHHHHHHHhCCCCCcEee
Confidence 899999999999999999988876 6899987654311 13678999999998 69999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+++|+|++.||+.|+++|++|++|.+||+|+|.+.. ..+|+| ..+++++||||+++||++.
T Consensus 118 v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~-----------------~~~~~d-~~~~~~~gDGA~A~vl~~~ 179 (335)
T 1u6e_A 118 LSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP-----------------TIDMYD-RGNCFIFADGAAAVVVGET 179 (335)
T ss_dssp EECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG-----------------GCCTTC-TTTTTTBCEEEEEEEEEEC
T ss_pred eccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc-----------------ccCccc-cccceEeccccEEEEEEec
Confidence 9999999999999999999999999999999998542 123444 3589999999999999987
Q ss_pred ccccceeEEEEee-eeccCCCCC-----------CC---CCCCC--------HHHHHHHHHHHHHHcCCCCCCccEEEEe
Q psy1120 270 KDAKRVYARVVHA-KTNCDGYKE-----------QG---ITYPS--------GALQQRLLEDFYSECEVDPKNLAWIEAH 326 (883)
Q Consensus 270 ~~A~~i~a~I~g~-~~~~dg~~~-----------~~---~~~p~--------~~~~~~~i~~al~~agl~~~dI~~ve~h 326 (883)
++ ..++.++.+. +...+.... .. ....+ ...+.++++++|+++|++++|||||++|
T Consensus 180 ~~-~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~~~H 258 (335)
T 1u6e_A 180 PF-QGIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPH 258 (335)
T ss_dssp SS-CCBCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred CC-CCeeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 65 2344444332 111110000 00 00011 2467889999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHH
Q psy1120 327 GTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSV 374 (883)
Q Consensus 327 gtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~l 374 (883)
+++|+..|. +.+.|+-....++. ..+.++||+.+|+....|
T Consensus 259 ~~~~~~~~~-----~~~~lg~~~~~~~~--~~~~~~Gnt~sAs~~~~L 299 (335)
T 1u6e_A 259 QANSRINEL-----LVKNLQLRPDAVVA--NDIEHTGNTSAASIPLAM 299 (335)
T ss_dssp CSCHHHHHH-----HHHHHTCCTTCEEC--CTHHHHCBCGGGHHHHHH
T ss_pred CCCHHHHHH-----HHHHcCCCchhhhh--hhhhhhCcHHHHHHHHHH
Confidence 999997775 44556532221232 235789999999965433
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-25 Score=246.46 Aligned_cols=289 Identities=11% Similarity=0.100 Sum_probs=200.4
Q ss_pred EEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCC-CCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 35 ICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGK-EHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 35 iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
+.|+|+|+.+|.. .+.++||+.+..... ..+..+|...- .......+. ...+.+.|+ .+|++++++....++..
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~--~~~~~~~~~~i~~~~GI~~R~-~~~~~~~~~-~~~~~~~r~~~~~~~~~ 85 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHT--DHPQLPLALRLIENTGVRTRH-IVQPIEDTL-EHPGFEDRNKVYEREAK 85 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHT--TCTTHHHHHHHHHHTCCCEEE-ESSCHHHHT-SCCCHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhcc--ChhhHHHHHHHHHhcCCCcce-eecChhhhc-cCCChhHHHHHHHHHHH
Confidence 7899999999985 688999998754321 11111120000 000011110 111223354 56778888888888999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--ceeee
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSYTV 190 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~tv 190 (883)
+|+++++++||+|||+++++++ +|++++..+ + .. ...+.+|+..||+++ |+++|
T Consensus 86 ~la~~Aa~~aL~~agl~~~~id----~vi~~t~~~-~--------------~~-----p~~a~~v~~~lGl~~~~~~~~v 141 (382)
T 1u0m_A 86 SRVPAVIQRALDDAELLATDID----VIIYVSCTG-F--------------MM-----PSLTAWLINEMGFDSTTRQIPI 141 (382)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCS----EEEEECSSS-C--------------CS-----SCHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHCC----EEEEEecCC-C--------------CC-----CcHHHHHHHHhCCCCCcceEEc
Confidence 9999999999999999988876 477776532 1 01 135789999999998 89999
Q ss_pred -cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCC----CcccccceEEEE
Q psy1120 191 -DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAAN----GYCRSEAVCIMY 265 (883)
Q Consensus 191 -~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~----G~~~gEGa~~vv 265 (883)
+++|+|++.||+.|+++|++|.+|.|||+|+|.+. +. .+++|.+.+ |+++||||+++|
T Consensus 142 ~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------------~~~~d~~~~~~~~~~lfGDGA~A~v 204 (382)
T 1u0m_A 142 AQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCS-LC----------------YQPTDLGVGSLLCNGLFGDGIAAAV 204 (382)
T ss_dssp CSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGG-GG----------------CCTTCCSHHHHHHHHHBCEEEEEEE
T ss_pred cCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-hh----------------cCcccCCHHHhhccchhcCCcEEEE
Confidence 99999999999999999999999999999999843 21 134443333 899999999999
Q ss_pred EcccccccceeEEEEeeee--ccCCCCC-------------CCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEEecC
Q psy1120 266 LQKSKDAKRVYARVVHAKT--NCDGYKE-------------QGITYP--SGALQQRLLEDFYSECEVDPKNLAWIEAHGT 328 (883)
Q Consensus 266 L~~~~~A~~i~a~I~g~~~--~~dg~~~-------------~~~~~p--~~~~~~~~i~~al~~agl~~~dI~~ve~hgt 328 (883)
|++.++ . -..|.++.. +.++... .+...| ....+. +++++|+++|++++|||||++|++
T Consensus 205 L~~~~~-~--g~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~ 280 (382)
T 1u0m_A 205 VRGRGG-T--GVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAG 280 (382)
T ss_dssp EETTTC-S--EEEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECS
T ss_pred EeccCC-C--CcEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCC
Confidence 998654 1 134555433 3333210 011122 256777 999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHhhCCCCCCCeee-cccCCCCCCCcccchhhHHHHHH
Q psy1120 329 GTKVGDPEEVQALENVFCPGRTTPLLI-GSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 329 gt~~gD~~E~~Ai~~~f~~~~~~~~~i-gs~K~~~GH~~~AsG~~~li~~~ 378 (883)
+|+..|. +.+.++-. .+++.+ .+.+.++||+.+|+....|..++
T Consensus 281 ~~~i~d~-----~~~~lgl~-~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~ 325 (382)
T 1u0m_A 281 GPRILDD-----LSTFLEVD-PHAFRFSRATLTEYGNIASAVVLDALRRLF 325 (382)
T ss_dssp HHHHHHH-----HHHHSCSC-GGGGHHHHHHHHHTCBCTTHHHHHHHHHHH
T ss_pred CHHHHHH-----HHHHcCCC-HHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence 9987764 44556421 223433 35678899999999887776554
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-24 Score=248.27 Aligned_cols=279 Identities=9% Similarity=-0.034 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceeeec
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYTVD 191 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~tv~ 191 (883)
.|+.+++++||+|||+++++++..-.|++++........ ..........++..++..+|+.+ |.++++
T Consensus 44 dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~-----------~~~~~g~~~~~~~~va~~lGl~~~~~~~~~ 112 (520)
T 4egv_A 44 ELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGP-----------ASAPLGVSSNYPRSVARNIGADPAHAVLEV 112 (520)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC-------------------------CCHHHHHHHHHTCCCSEEEECC
T ss_pred HHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccch-----------hhhhhccccCHHHHHHHHcCCCCceEEEec
Confidence 388999999999999999887765557666543321110 01111222346678899999976 778899
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHh------------------------------------
Q psy1120 192 SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFAR------------------------------------ 235 (883)
Q Consensus 192 tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~------------------------------------ 235 (883)
.+|+|++.||++|+++|++|+||++|+||+|.|.+.........
T Consensus 113 ~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~ 192 (520)
T 4egv_A 113 IGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAP 192 (520)
T ss_dssp SSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHH
Confidence 99999999999999999999999999999999865322110000
Q ss_pred -------------cC---------------------CCCCCCC--------------------CCCcccCCCCcccccce
Q psy1120 236 -------------LG---------------------VLSPDGR--------------------CKSFDEAANGYCRSEAV 261 (883)
Q Consensus 236 -------------~~---------------------~ls~~g~--------------------~~pfd~~~~G~~~gEGa 261 (883)
.+ ...|+.. +.|+-...|....+||+
T Consensus 193 ~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGA 272 (520)
T 4egv_A 193 VQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQG 272 (520)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEE
T ss_pred HHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcce
Confidence 00 0001100 11222334566779999
Q ss_pred EEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCC---CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCc
Q psy1120 262 CIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYP---SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGD 334 (883)
Q Consensus 262 ~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p---~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD 334 (883)
+++||.+++.|+ ++++.|++++....... ..+..| ...++..+++++|+++|++++|||++|+|..++
T Consensus 273 AAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~-~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~---- 347 (520)
T 4egv_A 273 AALLMMSVESARKLGVPEEKWVYLRGHADMKEP-KLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFP---- 347 (520)
T ss_dssp EEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECC-CGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSS----
T ss_pred EEEEEeeHHHHHHcCCCCceEEEEEEEeccCCc-ccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcH----
Confidence 999999999987 36777877766554322 112223 256889999999999999999999999997766
Q ss_pred HHHHHHHHHhhCC--CCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcCCCCeeeec
Q psy1120 335 PEEVQALENVFCP--GRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLES 411 (883)
Q Consensus 335 ~~E~~Ai~~~f~~--~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 411 (883)
++..+..+.++- .+..++.+++.+.++||+.+++|+.+++|++.+|+++..+..++ ++|+.+. +..+.+.+..
T Consensus 348 -~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~-~~~~~~~l~~ 422 (520)
T 4egv_A 348 -FPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIA-SKYSVGIYST 422 (520)
T ss_dssp -HHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTT-TEEEEEEEES
T ss_pred -HHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCee-eeeeEEEEcC
Confidence 455555555653 33468899899999999999999999999999999998887765 6899998 4555666643
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-23 Score=232.71 Aligned_cols=296 Identities=12% Similarity=0.127 Sum_probs=203.8
Q ss_pred CcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCC-CCCCCCCCccccccCCCCCcccCCCChhhhhcC--
Q psy1120 33 DEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGK-EHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTM-- 108 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~-- 108 (883)
.+|.|+|+|+.+|.. .+.++||+.+....+. ..+..+|...- .......+.-..++ ..||+.||+++.++...+
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~i~~~~Gi~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~ 89 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSD-KAETNEKVKRIFEQSQIKTRHLVRDY-TKPENSIKFRHLETITDVNN 89 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCS-CHHHHHHHHHHHHTTCCCEECCSSCT-TSGGGCGGGGGGCCHHHHHH
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhcc-ChHHHHHHHHHHHhCCcCcceeecCc-cccccccccCChHHHHHHHH
Confidence 369999999999986 6789999987543211 00001111000 00001111101112 368999999999888888
Q ss_pred ---ChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC
Q psy1120 109 ---DPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG 185 (883)
Q Consensus 109 ---dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G 185 (883)
++..+|+++++++||+|||+++++++ +|++|+..+. . . ...+.+|+..||+++
T Consensus 90 ~~~~~~~~la~~Aa~~al~~ag~~~~~id----~vi~~t~~~~---------------~----~-p~~a~~v~~~lGl~~ 145 (374)
T 2h84_A 90 QFKKVVPDLAQQACLRALKDWGGDKGDIT----HIVSVTSTGI---------------I----I-PDVNFKLIDLLGLNK 145 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSCC---------------C----S-SCHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeCCC---------------C----C-CcHHHHHHHHcCcCC
Confidence 88999999999999999999988886 5777765421 0 0 125789999999998
Q ss_pred --ceeeec-ccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccC--CCCcccccc
Q psy1120 186 --PSYTVD-SACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEA--ANGYCRSEA 260 (883)
Q Consensus 186 --ps~tv~-tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~--~~G~~~gEG 260 (883)
|++.|. ++|+|++.||+.|+++|++|.+|.|||+|+|.+.... .. +.|.+ .+++++|||
T Consensus 146 ~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~----------~~------~~dr~~~~~~~lfGDG 209 (374)
T 2h84_A 146 DVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHF----------SN------TDGGDQMVASSIFADG 209 (374)
T ss_dssp TCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGGC----------CC------SSSHHHHHHHHHBCCE
T ss_pred CCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhh----------cC------CCCHHHHhhhhhhccC
Confidence 899996 8999999999999999999999999999999853210 01 22222 258999999
Q ss_pred eEEEEEccccccc--ceeEEEEeeeec--cCCCC-------CCC------CCCCC--HHHHHHHHHHHHHHcC------C
Q psy1120 261 VCIMYLQKSKDAK--RVYARVVHAKTN--CDGYK-------EQG------ITYPS--GALQQRLLEDFYSECE------V 315 (883)
Q Consensus 261 a~~vvL~~~~~A~--~i~a~I~g~~~~--~dg~~-------~~~------~~~p~--~~~~~~~i~~al~~ag------l 315 (883)
|+++||++.+.+. .++ +|.+.+.. .++.. ..+ ...|. ...+.++++++|+++| +
T Consensus 210 A~A~vL~~~~~~~~~~~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l 288 (374)
T 2h84_A 210 SAAYIIGCNPRIEETPLY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAI 288 (374)
T ss_dssp EEEEEEESSCCTTCCCCE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCC
T ss_pred cEEEEEecCCCcccCCce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCC
Confidence 9999999887653 244 66665432 11110 001 11121 3567889999999999 9
Q ss_pred CCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHHHHH
Q psy1120 316 DPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 316 ~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li~~~ 378 (883)
+++||||| +|+++|+..|.+ .+.++- ..+++.+. ++...+||+.+|+-...|..++
T Consensus 289 ~~~did~~-~H~~~~~i~d~~-----~~~lgl-~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~ 345 (374)
T 2h84_A 289 SAKDCEFL-IHTGGKSILMNI-----ENSLGI-DPKQTKNTWDVYHAYGNMSSASVIFVMDHAR 345 (374)
T ss_dssp CSSSSEEE-ECCCCHHHHHHH-----HHHTTC-CGGGGHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred ChhhcCEe-ECCCCHHHHHHH-----HHHcCC-CHHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence 99999999 999999876644 445542 12334432 4566789999998776665554
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-20 Score=205.31 Aligned_cols=271 Identities=17% Similarity=0.283 Sum_probs=183.6
Q ss_pred cEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhh-hcCChH
Q psy1120 34 EICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQA-HTMDPM 111 (883)
Q Consensus 34 ~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~-~~~dp~ 111 (883)
+|.|+|+|+.+|.- .+.+++|+.+.+.. .. ..+.|-. ..+||..+.. ..-.+.
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~~-~~~~~i~----------------------~rtgi~~r~~~~~~~~~ 65 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--IE-TSDEWIV----------------------ARTGIHARYFAEPDVTT 65 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CC-CCHHHHH----------------------HHHCCSEEEECCTTCCH
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhcccc--CC-CCHHHhH----------------------HhcCceEEEEcCCCCCH
Confidence 79999999999985 78999999885411 11 1111211 0112221111 011357
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
..|+.+++++||+++|+++++++ .|++|+..+++. . ...+.+++..+|+ ++|+++
T Consensus 66 ~~la~~Aa~~al~~ag~~~~~Id----~vi~~t~~~~~~------------------~-p~~a~~v~~~lgl~~~~~~~~ 122 (333)
T 4dfe_A 66 SDLAFIASQRAIEAADIDPQSID----LIIVATSTPDFV------------------F-PSTACLLQNKLGIRNHGAAFD 122 (333)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSSS------------------B-SCHHHHHHHHTTCCSCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------C-CcHHHHHHHHhCCCCCCcEEE
Confidence 78999999999999999998886 588887765431 0 1357899999999 679999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+++|+|++.||+.|++.|++|.++.+||+|+|.+.... .|+.+..++++||||+++||++.
T Consensus 123 v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~------------------~~~d~~~~~lfGDGA~A~vl~~~ 184 (333)
T 4dfe_A 123 VQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL------------------DFKDRTTCVLFGDGAGAVILQAS 184 (333)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC------------------CTTCTTTTTTBCEEEEEEEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc------------------CcccccceeeeccccEEEEEEEc
Confidence 999999999999999999999999999999999854321 12334567899999999999987
Q ss_pred ccccceeEEEEeeeeccCCCCCCCCCCC------------------------CHHHHHHHHHHHHHHcCCCCCCccEEEE
Q psy1120 270 KDAKRVYARVVHAKTNCDGYKEQGITYP------------------------SGALQQRLLEDFYSECEVDPKNLAWIEA 325 (883)
Q Consensus 270 ~~A~~i~a~I~g~~~~~dg~~~~~~~~p------------------------~~~~~~~~i~~al~~agl~~~dI~~ve~ 325 (883)
+.. ++. ++...++|.....+..| ....+.++++++|+++|++++|||||.+
T Consensus 185 ~~~-~i~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~ 259 (333)
T 4dfe_A 185 DEP-GVL----ASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAEQIDWLIP 259 (333)
T ss_dssp SSC-SEE----EEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred CCC-CeE----EEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 642 222 22222332111111111 1256778999999999999999999999
Q ss_pred ecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 326 HGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 326 hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
|-.+... .+++.+.++-. .+++.. ....+||+.+|+=...|..+ ++.+.+
T Consensus 260 Hq~~~~i-----~~~~~~~lgl~-~~~~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~ 309 (333)
T 4dfe_A 260 HQANIRI-----MQSTCRKLGLP-QERMIV--TVGEHGNTSAASIPLALDVA---VRDGRI 309 (333)
T ss_dssp CCSCHHH-----HHHHHHHTTCC-GGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCS
T ss_pred cCCCHHH-----HHHHHHHhCCC-HHHhhh--hHHhcCchHHHHHHHHHHHH---HHcCCC
Confidence 9777653 34555556421 122322 33467999999866555443 444544
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.1e-20 Score=205.66 Aligned_cols=290 Identities=16% Similarity=0.121 Sum_probs=194.5
Q ss_pred CCCCcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhc-
Q psy1120 30 APGDEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHT- 107 (883)
Q Consensus 30 ~~~~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~- 107 (883)
|..+.|.|+|+|..+|.- .+.+++++.+..-..... .+..|-. ...||..|....
T Consensus 8 m~~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~-~~~~~i~----------------------~~tGi~~R~~~~~ 64 (345)
T 3s21_A 8 MLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLG-IKTDVLG----------------------DVAGIHARRLWDQ 64 (345)
T ss_dssp GSCSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHT-CCCCHHH----------------------HTTCCSEEEECSS
T ss_pred ceecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccC-CCHHHHH----------------------HhhCceeEEECCC
Confidence 344679999999999985 677888776531000000 0011110 111222222111
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--C
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--G 185 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--G 185 (883)
-.....|+.+++++||++||+++++++ .|++|+..+++.. ...+.+++..+|++ +
T Consensus 65 ~~~~~~La~~Aa~~al~~ag~~~~~Id----~vi~~t~~~~~~~-------------------p~~a~~v~~~lGl~~~~ 121 (345)
T 3s21_A 65 DVQASDAATQAARKALIDANIGIEKIG----LLINTSVSRDYLE-------------------PSTASIVSGNLGVSDHC 121 (345)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEECCSCCSCSS-------------------SCHHHHHHHHHTCCTTC
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCC-------------------ChHHHHHHHHhCCCCCc
Confidence 123568999999999999999999887 4888876544211 13578899999995 7
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEE
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMY 265 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vv 265 (883)
|+++|+++|+|++.||+.|+++|++|+++.|||+|+|.+.... .+...+++++++.|++||...+++++||||+++|
T Consensus 122 ~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~---~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~v 198 (345)
T 3s21_A 122 MTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVY---EKTLERMTSPDVTEEEFRNELAALTLGCGAAAMV 198 (345)
T ss_dssp EEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHH---HHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEE
T ss_pred eEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhh---ccccccccCCccchhhhhhhccceeeccceeEEE
Confidence 9999999999999999999999999999999999999965432 2233345667778999999999999999999999
Q ss_pred EcccccccceeEEEEeeeeccCCCCCCCCCCC-------C--------HHHHHHHHHHHHHHcCCCCCCccEEEEecCCC
Q psy1120 266 LQKSKDAKRVYARVVHAKTNCDGYKEQGITYP-------S--------GALQQRLLEDFYSECEVDPKNLAWIEAHGTGT 330 (883)
Q Consensus 266 L~~~~~A~~i~a~I~g~~~~~dg~~~~~~~~p-------~--------~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt 330 (883)
|++.+.... ...|.+.....++... .+..+ + .....++++++|+++|++++||||+..|-.+.
T Consensus 199 l~~~~~~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~ 276 (345)
T 3s21_A 199 MARSELVPD-APRYKGGVTRSATEWN-KLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSR 276 (345)
T ss_dssp EEEGGGSTT-SCEEEEEEEEECGGGT-TC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCH
T ss_pred EecCCCCCC-CcceeeeccccCcchh-hhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH
Confidence 998664311 1234444444443211 11101 1 12345778999999999999999999997765
Q ss_pred CCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 331 KVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 331 ~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
.. .+++.+.++-. .+++. ..-..+||+.+|+-...|..++
T Consensus 277 ~i-----~~~~~~~lgl~-~ek~~--~~l~~~GNt~sasi~~~L~~~~ 316 (345)
T 3s21_A 277 PH-----TAAFVKSFGID-PAKVM--TIFGEHGNIGPASVPIVLSKLK 316 (345)
T ss_dssp HH-----HHHHHHHHTCC-GGGBC--CCHHHHCBCGGGHHHHHHHHHH
T ss_pred HH-----HHHHHHHcCcC-HHHce--eeHhhcCchHHHHHHHHHHHHH
Confidence 53 34455556421 12222 1224579999998777766544
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-19 Score=229.05 Aligned_cols=243 Identities=11% Similarity=0.057 Sum_probs=169.3
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHH
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
+..++.+.++....|+++|+++||+|||+++++++. |+++++. ++ . ....+.+|+.
T Consensus 678 ~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~----ii~~t~~-~~--------------~-----~p~~a~~v~~ 733 (979)
T 3tsy_A 678 LNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITH----LVFCTTS-GV--------------E-----MPGADYKLAN 733 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCE----EEEEESS-CC--------------C-----SSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCE----EEEEeeC-CC--------------C-----CCcHHHHHHH
Confidence 455666666677889999999999999999988863 7777532 11 1 1246889999
Q ss_pred hhCCCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcc
Q psy1120 180 WLGVNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYC 256 (883)
Q Consensus 180 ~~~l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~ 256 (883)
.||++++ .+.+++||+|++.||..|+++|++|.++.|||+|+|.+.... .+...+.++...++++
T Consensus 734 ~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~------------~~~~~~~~~~~~~~~l 801 (979)
T 3tsy_A 734 LLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF------------RGPSEDALDSLVGQAL 801 (979)
T ss_dssp HHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC------------CCCCSSCHHHHHHHHH
T ss_pred HcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe------------eCCCccCHHHHhhhhh
Confidence 9999865 499999999999999999999999999999999999732211 1112233344445789
Q ss_pred cccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCC--C-----------CC--CHHHHHHHHHHHHHHcCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGI--T-----------YP--SGALQQRLLEDFYSECEVDP 317 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~--~-----------~p--~~~~~~~~i~~al~~agl~~ 317 (883)
+|||||++||++.+.+. .++....+.....+..+.... . .+ ......++++++|+++|+++
T Consensus 802 fGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~ 881 (979)
T 3tsy_A 802 FGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISD 881 (979)
T ss_dssp BCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC
T ss_pred ccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999877654 355555555544433221100 0 00 12336789999999999999
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 318 KNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 318 ~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
+||||+++|.+++...|.+| +.++-. .+++... ..-..+||+-+||=...|..+.-.++.|
T Consensus 882 ~did~~~~Hq~~~~i~~~~~-----~~lgl~-~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G 943 (979)
T 3tsy_A 882 WNSLFWIAHPGGPAILDAVE-----AKLNLD-KKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKG 943 (979)
T ss_dssp GGGSEEEECCSCHHHHHHHH-----HHHTCC-TTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHT
T ss_pred cccceEEECCCChHHHHHHH-----HHcCCC-hHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhccc
Confidence 99999999999987655444 334321 1222211 1234579999999888887765555444
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-19 Score=197.70 Aligned_cols=227 Identities=11% Similarity=0.062 Sum_probs=162.3
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCc--
Q psy1120 109 DPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGP-- 186 (883)
Q Consensus 109 dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gp-- 186 (883)
+....|+.+++.+||+++|+++++++ .|++|+..+ + . . ...+.+++..+|++++
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id----~vi~~t~~~-~--------------~----~-p~~a~~v~~~lGl~~~~~ 166 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIG----LLVLATSTG-F--------------I----A-PGVDVAIVKELGLSPSIS 166 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEE----EEEEEESSC-C--------------C----S-SCHHHHHHHHHTCCTTCE
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-C--------------c----c-ChHHHHHHHHcCcCCCcc
Confidence 35678999999999999999877665 466676533 1 0 0 1257899999999885
Q ss_pred eeee-cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCC----Ccccccce
Q psy1120 187 SYTV-DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAAN----GYCRSEAV 261 (883)
Q Consensus 187 s~tv-~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~----G~~~gEGa 261 (883)
++++ +++|+|++.||..|++.|++|.+|.|||+|+|.+.... . |+.+.+ ++++||||
T Consensus 167 ~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~-----------~-------~~~~r~~~~~~~lfGDGA 228 (393)
T 1ted_A 167 RVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA-----------V-------FADDINDVVIHSLFGDGC 228 (393)
T ss_dssp EEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC-----------C-------CCSSHHHHHHHHHBCEEE
T ss_pred eeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccC-----------C-------CCCCHHHhhhhhhhcCcc
Confidence 5887 99999999999999999999999999999999854210 0 333443 89999999
Q ss_pred EEEEEcccccc---cceeEEEEeeeec--cCCCCCC-------------CCCCC--CHHHHHHHHHHHHHHcCCCCCCcc
Q psy1120 262 CIMYLQKSKDA---KRVYARVVHAKTN--CDGYKEQ-------------GITYP--SGALQQRLLEDFYSECEVDPKNLA 321 (883)
Q Consensus 262 ~~vvL~~~~~A---~~i~a~I~g~~~~--~dg~~~~-------------~~~~p--~~~~~~~~i~~al~~agl~~~dI~ 321 (883)
+++||++.+.+ ...+++|.+++.. .|+.... +...| ....+.++++++|+++|++++|||
T Consensus 229 ~A~vL~~~~~~~~~~~~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId 308 (393)
T 1ted_A 229 AALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDID 308 (393)
T ss_dssp EEEEEEEECTTSCCCTTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCS
T ss_pred EEEEEecCCCccccCcceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCC
Confidence 99999987654 1356778876443 5553210 11112 234678899999999999999999
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeee-cccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 322 WIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLI-GSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 322 ~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~i-gs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
||.+|+++++..|.+| +.++- ..+++.+ ......+||+.+|+-...|..+ ++.+.+
T Consensus 309 ~~~~H~~~~~i~d~~~-----~~lgl-~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~---~~~g~~ 365 (393)
T 1ted_A 309 LWAIHPGGPKIIEQSV-----RSLGI-SAELAAQSWDVLARFGNMLSVSLIFVLETM---VQQAES 365 (393)
T ss_dssp CEEECCSCHHHHHHHH-----HHHTC-CGGGGHHHHHHHHHHCBCTHHHHHHHHHHH---HHSCSS
T ss_pred EEEECCCcHHHHHHHH-----HHcCC-CHHHHHHHHHHHHhhCCchHhHHHHHHHHH---HhcCcc
Confidence 9999999998776544 34532 1223332 1345678999888866554333 345544
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.63 E-value=9.7e-16 Score=172.15 Aligned_cols=298 Identities=10% Similarity=0.074 Sum_probs=191.9
Q ss_pred cEEEEecceeccCC-CCHHHHHHHHhcCC-Cc-ccCC--CcccccCCCCCCCCCCc----c-cc-ccCCCCCcccCCCCh
Q psy1120 34 EICITGIAGVFPDS-TDVRDFGEKLNNKV-DL-ISDD--DRRWKLGKEHPEIPQRT----G-KL-YEVNKFDAAFFGVHF 102 (883)
Q Consensus 34 ~iaI~G~g~~~P~g-~~~~~~w~~l~~g~-~~-~~~~--~~~~~~~~~~~~~~~~~----g-~~-~~~~~fD~~~f~i~~ 102 (883)
++.|+|+|+.+|.- .+.+++++.+.... +. ..+. ...|-.. ......+. . .+ .++..||+.+++++.
T Consensus 12 ~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~~ 89 (387)
T 3a5r_A 12 LATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCE--NSRIEKRYLHVTEEILKENPNIAAYEATSLNV 89 (387)
T ss_dssp CEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHH--TTTCCEEECSCCHHHHHHCHHHHSSSSSCHHH
T ss_pred CcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHH--hCCCCceEEecChhhhccCcccccccCCCHHH
Confidence 58999999999985 45666766652211 00 0000 0001000 00000000 0 00 123457888888899
Q ss_pred hhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhC
Q psy1120 103 KQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLG 182 (883)
Q Consensus 103 ~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 182 (883)
++...+.....|+.+++.+||+++|+++++++ .|++++..+. .....+.+++..+|
T Consensus 90 r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~~~~--------------------~~p~~a~~v~~~lG 145 (387)
T 3a5r_A 90 RHKMQVKGVAELGKEAALKAIKEWGQPKSKIT----HLIVCCLAGV--------------------DMPGADYQLTKLLD 145 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSCC--------------------EESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCC--------------------CCCcHHHHHHHHcC
Confidence 99999999999999999999999999988886 4777765321 01135789999999
Q ss_pred CCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcc----cCCCCc
Q psy1120 183 VNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFD----EAANGY 255 (883)
Q Consensus 183 l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd----~~~~G~ 255 (883)
++++ .+.|+.+|+|++.||..|+++|++|.++.|||+|+|.+... + ..|+| ....++
T Consensus 146 l~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~----------~------~~~~d~~~~~~~~~~ 209 (387)
T 3a5r_A 146 LDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTC----------F------RGPSETHLDSMIGQA 209 (387)
T ss_dssp CCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTT----------C------CCCCSSCCSSTTHHH
T ss_pred cCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchh----------h------cCCCccchhhccccc
Confidence 9875 78999999999999999999999999999999999984321 1 12333 234678
Q ss_pred ccccceEEEEEccccccc--ceeEEEEeeeecc--CCCCC-------CC----C--CCC--CHHHHHHHHHHHHHHcCCC
Q psy1120 256 CRSEAVCIMYLQKSKDAK--RVYARVVHAKTNC--DGYKE-------QG----I--TYP--SGALQQRLLEDFYSECEVD 316 (883)
Q Consensus 256 ~~gEGa~~vvL~~~~~A~--~i~a~I~g~~~~~--dg~~~-------~~----~--~~p--~~~~~~~~i~~al~~agl~ 316 (883)
++||||+++||++.+... ....++.+.+... ++... .+ + ..+ ......++++++|+++|++
T Consensus 210 lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~ 289 (387)
T 3a5r_A 210 ILGDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNIS 289 (387)
T ss_dssp HBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCC
T ss_pred eeccceeEEEEecCCCccccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999998765421 1123454433211 11000 00 0 001 1234567899999999998
Q ss_pred -CCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHHHHHHH
Q psy1120 317 -PKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVTKVILA 380 (883)
Q Consensus 317 -~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li~~~l~ 380 (883)
.+|| ++-.|-.+... ..++.+.++- ..+++... .+...+||+.+|+-...|-.++-.
T Consensus 290 d~~di-~~v~Hq~~~~i-----~~~~~~~lgl-~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~ 348 (387)
T 3a5r_A 290 DWNSL-FWIAHPGGPAI-----LDQVTAKVGL-EKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKK 348 (387)
T ss_dssp CGGGS-EEEECCSCHHH-----HHHHHHHHTC-CGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHH
T ss_pred Chhhe-eEEECCCCHHH-----HHHHHHHcCC-ChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHh
Confidence 8889 89999776543 3345555542 12233322 345678999999988877766543
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.59 E-value=5e-15 Score=167.45 Aligned_cols=303 Identities=14% Similarity=0.096 Sum_probs=188.9
Q ss_pred CcEEEEecceeccCC-CCHHHHHHHHhc-CCC-cccCC--CcccccCCCCCCCCCCccccc-cCCCCCcccC------CC
Q psy1120 33 DEICITGIAGVFPDS-TDVRDFGEKLNN-KVD-LISDD--DRRWKLGKEHPEIPQRTGKLY-EVNKFDAAFF------GV 100 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g-~~~~~~w~~l~~-g~~-~~~~~--~~~~~~~~~~~~~~~~~g~~~-~~~~fD~~~f------~i 100 (883)
.++.|+|+|+.+|.- .+.+++++.+.. ..+ ...+. ...|-.. ......+.-..+ ++...++.|| .+
T Consensus 37 ~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~ 114 (413)
T 1xes_A 37 GFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICE--RSAIKQRYMYLTEEILKKNPDVCAFVEVPSL 114 (413)
T ss_dssp SCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHH--TSCCCEEECSCCHHHHHTCHHHHSSSSSCCH
T ss_pred CCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHh--hcCcCceEEeeChhhhccCccccccccCCCH
Confidence 468999999999985 566777776532 100 00000 0011000 000000000000 0111234443 23
Q ss_pred ChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHh
Q psy1120 101 HFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYW 180 (883)
Q Consensus 101 ~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 180 (883)
..+....++....|+.+++.+||+++|+++++++ .|++|+..+. .. ...+.+|+..
T Consensus 115 ~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id----~li~~t~~~~-------------------~~-p~~a~~v~~~ 170 (413)
T 1xes_A 115 DARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT----HLIFCSTTTP-------------------DL-PGADFEVAKL 170 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESCCC-------------------EE-SCHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCCC-------------------cc-chHHHHHHHH
Confidence 4466666778899999999999999999988886 4777765431 01 1256789999
Q ss_pred hCCCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCccc
Q psy1120 181 LGVNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCR 257 (883)
Q Consensus 181 ~~l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~ 257 (883)
+|++++ .+.|+.+|+|++.||..|++.|++|.+|.|||+|+|.+... +..++ .++|+...+++++
T Consensus 171 lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~----------~~~~~--d~~~~~~~~~~lf 238 (413)
T 1xes_A 171 LGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVT----------FRGPS--ETHLDSLVGQALF 238 (413)
T ss_dssp HTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTT----------CCCCC--TTCHHHHHHHHHB
T ss_pred cCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhh----------hcCCC--ccchhhcccceeE
Confidence 999875 78999999999999999999999999999999999985431 11222 1456666789999
Q ss_pred ccceEEEEEccccccc--ceeEEEEeeeecc--CCCCC-------CC----C--CCC--CHHHHHHHHHHHHHHcCCC-C
Q psy1120 258 SEAVCIMYLQKSKDAK--RVYARVVHAKTNC--DGYKE-------QG----I--TYP--SGALQQRLLEDFYSECEVD-P 317 (883)
Q Consensus 258 gEGa~~vvL~~~~~A~--~i~a~I~g~~~~~--dg~~~-------~~----~--~~p--~~~~~~~~i~~al~~agl~-~ 317 (883)
||||+++||++.+... .....+.+.+... ++... .+ + ..| ......++++++|+++|++ .
T Consensus 239 GDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~ 318 (413)
T 1xes_A 239 GDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDW 318 (413)
T ss_dssp CCEEEEEEEESSCCTTTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCG
T ss_pred ecccEEEEEecCCCccccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9999999998765421 1123454443211 11000 00 0 011 1244567899999999998 8
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHHHHHHH
Q psy1120 318 KNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVTKVILA 380 (883)
Q Consensus 318 ~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li~~~l~ 380 (883)
+|| ++-.|-.+.. =..++.+.++-. .+++... .+...+||+-+|+-...|..++..
T Consensus 319 ~di-~~v~Hq~~~~-----i~~~~~~~Lgl~-~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~ 375 (413)
T 1xes_A 319 NKL-FWVVHPGGRA-----ILDRVEAKLNLD-PTKLIPTRHVMSEYGNMSSACVHFILDQTRKA 375 (413)
T ss_dssp GGS-EEEECCSCHH-----HHHHHHHHTTCC-TTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHH
T ss_pred cce-eEEECCCCHH-----HHHHHHHHcCCC-hHHhHHHHHHHHhcCcCchhhHHHHHHHHHHh
Confidence 888 8999966543 233455566421 2233322 334568999999988777766543
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.58 E-value=4e-14 Score=158.43 Aligned_cols=216 Identities=14% Similarity=0.214 Sum_probs=143.6
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceee
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYT 189 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~t 189 (883)
....|+.+|+.+||++||+++++++ .|++++..+++. .+ ..+.+++..+|++.|++.
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId----~vi~~t~t~~~~------------------~p-~~a~~v~~~LGl~~~~~d 172 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIG----AVLCACSNMQRA------------------YP-AMAIEVQNALGLGGFAFD 172 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEE----EEEEESSCCSCS------------------BS-CHHHHHHHHTTCCSEEEE
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC------------------cc-HHHHHHHHHhCCCCeEEE
Confidence 3568999999999999999988876 488887655431 11 257789999999999999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+.+|+|++.||..|++.|++|.++.|||+|+|.+..- +.+ .| ....+++||||+|+||++.
T Consensus 173 v~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~-----------~d~------~d-r~t~~lFGDGA~A~vl~~~ 234 (392)
T 3led_A 173 MNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSGH-----------LNF------RD-RDSHFIFGDVATAAIVERA 234 (392)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------CCT------TC-TTTTTTBCEEEEEEEEEEG
T ss_pred ECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCCc-----------CCc------Cc-ccCCcccccccEEEEEEec
Confidence 99999999999999999999999999999999984321 111 11 2356889999999999986
Q ss_pred ccccceeEEEEeeeeccCCCCC----CC---------------CCCCCH--------HHHHHHHHHHHHHcCCCCCCccE
Q psy1120 270 KDAKRVYARVVHAKTNCDGYKE----QG---------------ITYPSG--------ALQQRLLEDFYSECEVDPKNLAW 322 (883)
Q Consensus 270 ~~A~~i~a~I~g~~~~~dg~~~----~~---------------~~~p~~--------~~~~~~i~~al~~agl~~~dI~~ 322 (883)
+... ....|.++...+++... .+ ....++ ....++++++|+++|++++|||+
T Consensus 235 ~~~~-~~~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~ 313 (392)
T 3led_A 235 DDAQ-GGWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKR 313 (392)
T ss_dssp GGCC-SSEEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSE
T ss_pred CCCC-CCCeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 5421 11233333332222100 00 000111 12346789999999999999999
Q ss_pred EEEecCCCCCCcHHHHHHHHHh-hCC-CCCCCeeecccCCCCCCCcccchhhHH
Q psy1120 323 IEAHGTGTKVGDPEEVQALENV-FCP-GRTTPLLIGSVKSNIGHSEPASGVCSV 374 (883)
Q Consensus 323 ve~hgtgt~~gD~~E~~Ai~~~-f~~-~~~~~~~igs~K~~~GH~~~AsG~~~l 374 (883)
+-.|-.+.. =.+++.+. ++- -...+.+ ..-...||+-+|+=...|
T Consensus 314 ~v~Hqan~~-----i~~~~~~~llgl~~~~~k~~--~~l~~~GNtssAsipl~L 360 (392)
T 3led_A 314 MWLHQANIN-----MNEIIGRKVLGRDPTRDENV--IILDDYANTSSAGSIIAF 360 (392)
T ss_dssp EEECSSCHH-----HHHHHHHHHHTSCCCTTTBC--CCHHHHCBCGGGHHHHHH
T ss_pred EEEcCCCHH-----HHHHHHHHhcCCCCCHHHHH--HHHhhhCccHHHHHHHHH
Confidence 999944432 23344443 341 1112221 112356898777644433
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-14 Score=160.41 Aligned_cols=277 Identities=13% Similarity=0.119 Sum_probs=174.3
Q ss_pred CCCCcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhc-
Q psy1120 30 APGDEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHT- 107 (883)
Q Consensus 30 ~~~~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~- 107 (883)
+..+.|.|+|+|..+|.- .+.+++.+.+. +. +..|-. .+ .||..|....
T Consensus 26 ~~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~------~~~~i~--------~~--------------tGI~~R~~a~~ 76 (365)
T 3gwa_A 26 AHPPRAAIADIAGHLPEQVLTNDVLAQLYP-DW------PAEKIL--------AK--------------TGIRERRIAAP 76 (365)
T ss_dssp ---CEEEEEEEEEECCSEEEEHHHHHHHCT-TC------CHHHHH--------HH--------------HCCCEEEECCT
T ss_pred ceeccEEEEEEEEeCCCcEEcHHHHHHHcc-CC------CHHHHH--------Hh--------------cCccEEEECCC
Confidence 345679999999999984 67777776551 11 111110 00 1121111100
Q ss_pred CChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--C
Q psy1120 108 MDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--G 185 (883)
Q Consensus 108 ~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--G 185 (883)
-.....|+.+++.+||+++|+++++++ .|++++..+++. .+ ..+.+++..+|++ .
T Consensus 77 ~~~~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~~~~~~------------------~p-~~a~~v~~~lGl~~~~ 133 (365)
T 3gwa_A 77 RETAADLAYEAARKLFAQGAVGADQVD----FVILCTQAPDYV------------------LP-TSACMLQHRLGIPTHA 133 (365)
T ss_dssp TCCHHHHHHHHHHHHHHTTSCCGGGCC----EEEEEESSCSCS------------------BS-CHHHHHHHHTTCCTTS
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------CC-cHHHHHHHHcCCCCCc
Confidence 123567999999999999999999887 488887654421 11 2577899999997 6
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEE
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMY 265 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vv 265 (883)
|++.|+.+|+|++.||..|++.|++|.++.|||+|+|.+.... .++ | .....++||||+++|
T Consensus 134 ~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~~~------d-r~~~~lfGDGAaA~v 195 (365)
T 3gwa_A 134 GALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYL-----------HPL------D-KSVRTLFGDGASATA 195 (365)
T ss_dssp EEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGS-----------CTT------C-HHHHTTBCCEEEEEE
T ss_pred eEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccC-----------Ccc------c-ccccccccceeEEEE
Confidence 9999999999999999999999999999999999999855421 111 1 123567999999999
Q ss_pred Eccccccc-ceeEEEEeeeec--------cCCCCCC-------------------CCCCCC--------HHHHHHHHHHH
Q psy1120 266 LQKSKDAK-RVYARVVHAKTN--------CDGYKEQ-------------------GITYPS--------GALQQRLLEDF 309 (883)
Q Consensus 266 L~~~~~A~-~i~a~I~g~~~~--------~dg~~~~-------------------~~~~p~--------~~~~~~~i~~a 309 (883)
|++.+... .+.....++... ..+.... ....-+ .....++++++
T Consensus 196 l~~~~~~~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~ 275 (365)
T 3gwa_A 196 VIAEHGELERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRL 275 (365)
T ss_dssp EEEECSSSCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHH
Confidence 99865432 233322221100 0110000 000001 23345788999
Q ss_pred HHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCC
Q psy1120 310 YSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIP 387 (883)
Q Consensus 310 l~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ip 387 (883)
|+++|++++|||++-.|-.+.. =.+++.+.++-. .+++. ..-..+||+.+||=...|.. .++.+.+.
T Consensus 276 L~~~gl~~~did~~v~Hq~n~~-----i~~~~~~~Lgl~-~ek~~--~~l~~~GNtssAsipl~L~~---~~~~g~~~ 342 (365)
T 3gwa_A 276 LALAGEPRENIDCFVLHQANRF-----MLDALRKKMKIP-EHKFP--VLMEHCGNTVSSTLPLALET---MRANGTLA 342 (365)
T ss_dssp HHHHTCCGGGCSEEEECCCCHH-----HHHHHHHHHTCC-GGGSC--CCCTTTCBCGGGHHHHHHHH---HHHTTCCC
T ss_pred HHHcCCCHHHCCEEEEcCCCHH-----HHHHHHHHhCCC-HHHHH--HHHhcccchHHHHHHHHHHH---HHHcCCCC
Confidence 9999999999999999954433 345566666421 12222 22357899998876554433 34555443
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.56 E-value=9.4e-14 Score=151.78 Aligned_cols=219 Identities=17% Similarity=0.271 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~t 189 (883)
...|+.+++.+||+++|+++++++ .|++++..+++. .+ ..+.+++..+|++ .|++.
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~~~~~~------------------~p-~~a~~v~~~lGl~~~~~~~ 114 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE----LIIVATTSHSHA------------------YP-SAACQVQGLLNIDDAISFD 114 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC----EEEEECSCCSCS------------------SS-CHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------Cc-cHHHHHHHHhCCCCccEEE
Confidence 467999999999999999998887 488887655421 11 2577899999995 59999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+.+|+|++.||..|++.|++|.++.+||+|+|.+... +.+ +.+....++||||+|+||++.
T Consensus 115 v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~~~-------~d~~~~~lfGDGA~A~vl~~~ 176 (323)
T 3il3_A 115 LAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRK-----------LDE-------TDRSTVVLFGDGAGAVILEAS 176 (323)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGS-----------CCT-------TCTTTTTTBCEEEEEEEEEEE
T ss_pred ECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccc-----------cCc-------cccccccccccceEEEEEEEc
Confidence 99999999999999999999999999999999985431 111 112356789999999999976
Q ss_pred ccccceeEEEEeeeeccCCCCCCCCCCC--------------C--------HHHHHHHHHHHHHHcCCCCCCccEEEEec
Q psy1120 270 KDAKRVYARVVHAKTNCDGYKEQGITYP--------------S--------GALQQRLLEDFYSECEVDPKNLAWIEAHG 327 (883)
Q Consensus 270 ~~A~~i~a~I~g~~~~~dg~~~~~~~~p--------------~--------~~~~~~~i~~al~~agl~~~dI~~ve~hg 327 (883)
+. ..+.. +...++|.....+..| . .....++++++|+++|++++|||++-.|-
T Consensus 177 ~~-~~i~~----~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq 251 (323)
T 3il3_A 177 EQ-EGIIS----THLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQ 251 (323)
T ss_dssp SS-CCEEE----EEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECC
T ss_pred CC-CCeEE----EEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC
Confidence 52 22322 2222222110000000 1 12345678999999999999999999995
Q ss_pred CCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 328 TGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 328 tgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
.+.. =.+++.+.++-. .+++.. + -..+||+.+|+=...|..+ ++.+.+
T Consensus 252 ~~~~-----i~~~~~~~lgl~-~ek~~~-~-l~~~GNt~sasi~~~L~~~---~~~g~~ 299 (323)
T 3il3_A 252 ANLR-----IITATAKKLEMD-MSQVVV-T-LDKYANNSAATVPVALDEA---IRDGRI 299 (323)
T ss_dssp SCHH-----HHHHHHHHTTCC-GGGBCC-C-HHHHCBCGGGHHHHHHHHH---HHTTSS
T ss_pred CCHH-----HHHHHHHHcCcC-HHHhhc-c-HhhcCchHHHHHHHHHHHH---HHcCCC
Confidence 5433 345566666421 122222 2 2356999988866665544 445544
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=3.7e-15 Score=167.66 Aligned_cols=216 Identities=15% Similarity=0.150 Sum_probs=148.1
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceE-EEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cc
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTG-VFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GP 186 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~g-v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gp 186 (883)
....|+.+|+.+||++ ++++ +++ |++|+..+++. . ...+..++..+|++ .|
T Consensus 50 ~~~~la~~Aa~~aL~~--~~~~-----~Id~li~~t~~~~~~------------------~-p~~a~~v~~~lGl~~~~~ 103 (396)
T 1xpm_A 50 DIVSMGANAAKDIITD--EDKK-----KIGMVIVATESAVDA------------------A-KAAAVQIHNLLGIQPFAR 103 (396)
T ss_dssp CHHHHHHHHHHTTCCH--HHHH-----HEEEEEEECSSCSBS------------------S-SCHHHHHHHHTTCCSSCE
T ss_pred CHHHHHHHHHHHHHhc--CCHH-----HCCEEEEEeCCCCCC------------------C-CCHHHHHHHHhCCCCCce
Confidence 3567999999999987 4443 444 55676544310 1 13578899999997 49
Q ss_pred eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEE
Q psy1120 187 SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYL 266 (883)
Q Consensus 187 s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL 266 (883)
++.|.++|+|++.||..|++.|++|.++.|||+|+|. ... . ++ ..++++.||||+++||
T Consensus 104 ~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s~~-~------------------~~-~~~~~~~GdGA~A~vl 162 (396)
T 1xpm_A 104 CFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-ARY-G------------------LN-SGGEPTQGAGAVAMVI 162 (396)
T ss_dssp EEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-ECC-C------------------TT-CSSGGGCEEEEEEEEE
T ss_pred EEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-hcc-c------------------cC-CCCCcccccceEEEEe
Confidence 9999999999999999999999999999999999996 221 0 11 1368999999999999
Q ss_pred cccccccceeEEEEeeeecc-CCCCCCCCCCC--------CHHH--------HHHHHHHHHHHcCCCCCCccEEEEecCC
Q psy1120 267 QKSKDAKRVYARVVHAKTNC-DGYKEQGITYP--------SGAL--------QQRLLEDFYSECEVDPKNLAWIEAHGTG 329 (883)
Q Consensus 267 ~~~~~A~~i~a~I~g~~~~~-dg~~~~~~~~p--------~~~~--------~~~~i~~al~~agl~~~dI~~ve~hgtg 329 (883)
++.. .+++...+.+... +..+ +..| ++.. ..++++++|+++|++++|||||.+|+++
T Consensus 163 ~~~~---~i~~~~~~~g~~~~d~~~---~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~ 236 (396)
T 1xpm_A 163 AHNP---SILALNEDAVAYTEDVYD---FWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPF 236 (396)
T ss_dssp EESC---SSEEECSCCEEEECCCCS---EECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSS
T ss_pred ccCC---ceEEEEeccccccceEEE---eeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCc
Confidence 8742 4555555433322 2211 1112 3443 6789999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhCCCCCCCee--e---cccCCCCCCCcccchhhHHHHHHH
Q psy1120 330 TKVGDPEEVQALENVFCPGRTTPLL--I---GSVKSNIGHSEPASGVCSVTKVIL 379 (883)
Q Consensus 330 t~~gD~~E~~Ai~~~f~~~~~~~~~--i---gs~K~~~GH~~~AsG~~~li~~~l 379 (883)
|+..|......+....+- ..+.+. + -.+...+||+.+||-...|..++.
T Consensus 237 ~~~~~~~~~~l~~~~~~~-~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~ 290 (396)
T 1xpm_A 237 TKMGKKALESIIDNADET-TQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE 290 (396)
T ss_dssp HHHHHHHHHTTGGGSCHH-HHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhcccC-CHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH
Confidence 998776553322110000 000000 0 112367899999988877776553
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.3e-13 Score=150.68 Aligned_cols=271 Identities=13% Similarity=0.185 Sum_probs=164.9
Q ss_pred CcEEEEecceeccCC-CCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 33 DEICITGIAGVFPDS-TDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
..|.|+|+|..+|.- .+.+++.+.+. .+ +.|-. .+. ||..|....-+..
T Consensus 3 ~~~~I~~~g~~lP~~~v~n~~~~~~~~--~~------~~~i~--------~~~--------------Gi~~R~~a~~~e~ 52 (321)
T 3il6_A 3 NYARISCTSRYVPENCVTNHQLSEMMD--TS------AAWIH--------SRT--------------GISERRIVTQENT 52 (321)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHTT--SC------HHHHH--------HHH--------------SCSEEECCSSCCH
T ss_pred CcEEEEEEEEECCCcEEcHHHHHHHhC--CC------hhhhh--------hhc--------------CceEEEECCCCCH
Confidence 468999999999984 57777766541 11 11211 011 1111111111125
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceeee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYTV 190 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~tv 190 (883)
..|+.+++.+||+++|+++++++ .|++|+..+++. . ...+.+++..+|++ .|.+.|
T Consensus 53 ~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~~~~~~------------------~-p~~a~~v~~~lGl~~~~~~~v 109 (321)
T 3il6_A 53 SDLCHQVAKQLLEKSGKQASEID----FILVATVTPDFN------------------M-PSVACQVQGAIGATEAFAFDI 109 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCS------------------S-SCHHHHHHHHTTCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCcC------------------C-CcHHHHHHHHcCCCCceEEEe
Confidence 68999999999999999998887 588887654421 1 12578899999997 699999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
+.+|+|++.||..|++.|++|.++.+||+|+|.+... +. ++.+....++||||+++||++.+
T Consensus 110 ~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~~-------~~dr~~~~lfGDGA~A~vl~~~~ 171 (321)
T 3il6_A 110 SAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKM-----------LD-------WTDRSTAVLFGDGAAGVLIEAAE 171 (321)
T ss_dssp CCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGGG-----------SC-------TTCTTTGGGBCCEEEEEEEEEES
T ss_pred CcccHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc-----------CC-------ccccccceeeccccEEEEEEEcC
Confidence 9999999999999999999999999999999985321 11 11123457899999999999865
Q ss_pred cccceeEEEEee-ee-----ccC--CCCC---------CCCCCCCHHH----HHHHHHHHHHHcCCCCCCccEEEEecCC
Q psy1120 271 DAKRVYARVVHA-KT-----NCD--GYKE---------QGITYPSGAL----QQRLLEDFYSECEVDPKNLAWIEAHGTG 329 (883)
Q Consensus 271 ~A~~i~a~I~g~-~~-----~~d--g~~~---------~~~~~p~~~~----~~~~i~~al~~agl~~~dI~~ve~hgtg 329 (883)
.. .+.....++ +. ... +... .....-++.. ..+.+.++++++ +.++|||++-.|-.+
T Consensus 172 ~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~did~~v~Hq~~ 249 (321)
T 3il6_A 172 TP-HFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDETVDYLLLHQAN 249 (321)
T ss_dssp SC-CEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGGCSEEEECCSC
T ss_pred CC-CEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCcccCCEEEEcCCC
Confidence 43 233222221 10 000 0000 0000011211 122333344433 238999999999444
Q ss_pred CCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCC
Q psy1120 330 TKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIP 387 (883)
Q Consensus 330 t~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ip 387 (883)
. -=.+++.+.++-. .+++.. .-..+||+-+|+=...|-.+ ++.+.+.
T Consensus 250 ~-----~i~~~~~~~lgl~-~ek~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~~ 296 (321)
T 3il6_A 250 V-----RIIDKIARKTKIS-REKFLT--NMDKYGNTSAASIPILLDEA---VENGTLI 296 (321)
T ss_dssp H-----HHHHHHHHHHTCC-GGGBCC--CGGGTCBCGGGHHHHHHHHH---HHTTSSC
T ss_pred H-----HHHHHHHHHcCcC-HHHhhh--hHhhcccHHHHHHHHHHHHH---HHhCCCC
Confidence 3 2345666666421 122322 33567999888766555443 4455443
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=153.40 Aligned_cols=221 Identities=13% Similarity=0.167 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+++.+||+++|+++++++ .|++++..+++. .+ ..+.+++..+|++. |.+.
T Consensus 74 ~~~La~~Aa~~aL~~agl~~~dId----~vi~~t~~~~~~------------------~p-~~a~~v~~~lGl~~~~~~~ 130 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLPEDID----LLLVNTLSPDHH------------------DP-SQACLIQPLLGLRHIPVLD 130 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCGGGCC----EEEEECSSCSSS------------------BS-CHHHHHHHHHTCCSCCEEE
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC----EEEEEeCCCCCC------------------CC-cHHHHHHHHcCCCCCcEEE
Confidence 467999999999999999999887 588887654321 11 25778999999964 8999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|+.+|+|++.||..|++.|++|.++.+||+|+|.+.... .++.. ......++||||+|+||++.
T Consensus 131 v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~-----------~~~d~-----~~~t~~lfGDGAaA~vl~~~ 194 (359)
T 3h78_A 131 IRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRM-----------DCSDR-----GRNLSILLGDGAGAVVVSAG 194 (359)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGC-----------CCSTT-----THHHHTTBCEEEEEEEEECC
T ss_pred ECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccC-----------Ccccc-----cccccceecceeEEEEEEec
Confidence 999999999999999999999999999999999854321 11100 01234678999999999986
Q ss_pred cc-ccceeEEEEeeeec------cC--CCCCCC------------CCCCC--------HHHHHHHHHHHHHHcCCCCCCc
Q psy1120 270 KD-AKRVYARVVHAKTN------CD--GYKEQG------------ITYPS--------GALQQRLLEDFYSECEVDPKNL 320 (883)
Q Consensus 270 ~~-A~~i~a~I~g~~~~------~d--g~~~~~------------~~~p~--------~~~~~~~i~~al~~agl~~~dI 320 (883)
+. ..++.....+.... .. |..... ...-+ .....++++++|+++|++++||
T Consensus 195 ~~~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~di 274 (359)
T 3h78_A 195 ESLEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDI 274 (359)
T ss_dssp SCSSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred CCCCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 54 22333322221100 00 110000 00001 1234578899999999999999
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 321 AWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 321 ~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
|++-.|-.+.. =.+++.+.++-. .+++.. ++ ..+||+-+|+=...|..++
T Consensus 275 d~~v~Hq~n~~-----i~~~~~~~lgl~-~ek~~~-~l-~~~GNt~sAsi~l~L~~~~ 324 (359)
T 3h78_A 275 DHVICHQPNLR-----ILDAVQEQLGIP-QHKFAV-TV-DRLGNMASASTPVTLAMFW 324 (359)
T ss_dssp SEEEECCSCHH-----HHHHHHHHHTCC-GGGBCC-CH-HHHCBCGGGHHHHHHHHHG
T ss_pred CEEEECCCCHH-----HHHHHHHHhCcC-HHHhhh-hh-hcccchHHHHHHHHHHHHH
Confidence 99999955433 245566666421 122222 22 3569999988666665543
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=152.75 Aligned_cols=223 Identities=13% Similarity=0.131 Sum_probs=145.3
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-cee
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSY 188 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~ 188 (883)
....|+.+++.+||+++|+++++++ .|++++..... + .. ...+.++...+|++. |.+
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~~~~~------------~----d~--~~~a~~v~~~lG~~~~~~~ 110 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVS----LVLHSSLWFQG------------I----DL--WPAASYVAHEAVGRHVPAF 110 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEE----EEEEECSSCCS------------S----SS--SCHHHHHHHHHTCSSSCEE
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCC------------c----cc--ccHHHHHHHHhCCCCCcEE
Confidence 4567999999999999999988776 37777653100 0 00 024678899999964 899
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCC--cEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEE
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCN--AAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYL 266 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d--~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL 266 (883)
.|+.+|+|++.||..|++.|++|.++ .+||+|+|.+..+. + ..|+. +.++++||||+++||
T Consensus 111 ~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------~------~~~~~-~~~~lfGDGA~A~vl 173 (357)
T 3s3l_A 111 GLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------I------DRWNS-VDVTMYGDGAAALVL 173 (357)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT----------C------CTTTS-SSSCCBCCEEEEEEE
T ss_pred EEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc----------c------ccccc-cCCcccccccEEEEE
Confidence 99999999999999999999999999 99999999854321 0 11222 257889999999999
Q ss_pred cccccccceeEEEEeeeeccCCCCC-----C-CCCC--------CC---------------------HHHHHHHHHHHHH
Q psy1120 267 QKSKDAKRVYARVVHAKTNCDGYKE-----Q-GITY--------PS---------------------GALQQRLLEDFYS 311 (883)
Q Consensus 267 ~~~~~A~~i~a~I~g~~~~~dg~~~-----~-~~~~--------p~---------------------~~~~~~~i~~al~ 311 (883)
++.+...+ |.++...++|... . .... .. .....++++++|+
T Consensus 174 ~~~~~~~~----i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~L~ 249 (357)
T 3s3l_A 174 STRDGFAR----VLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQALE 249 (357)
T ss_dssp ESSCCSEE----EEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCe----EEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHHHH
Confidence 98654323 3333333332100 0 0000 01 1134568899999
Q ss_pred HcCCCCCCccEEEE-ecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 312 ECEVDPKNLAWIEA-HGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 312 ~agl~~~dI~~ve~-hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
++|++++|||++-. |-.... - +++.+.++-. .+++.. .+-..+||+-+|+=...|..+ ++.+.+
T Consensus 250 ~~gl~~~did~~v~~hq~~~~-~-----~~~~~~lgl~-~ek~~~-~~~~~~GNt~aAsipl~L~~~---~~~g~l 314 (357)
T 3s3l_A 250 DAGTAIEDIAHAVIPVSRRGT-G-----HELHDLLGLP-DERTSW-AYGRTTGHVGAGDQYAGLAHL---VENALV 314 (357)
T ss_dssp HTTCCGGGCSEEECCSCCCCS-S-----CCHHHHHTSC-GGGBTH-HHHHHHCBCTTCHHHHHHHHH---HHTTCC
T ss_pred HcCCCHHHCCEEEecCcChHH-H-----HHHHHHcCCC-HHHhHH-HhccccccchHhHHHHHHHHH---HHcCCC
Confidence 99999999999996 855544 2 3344445321 112221 121236888888765555443 445544
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.1e-13 Score=155.69 Aligned_cols=184 Identities=10% Similarity=0.082 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC----CCc
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV----NGP 186 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l----~Gp 186 (883)
...|+.+|+.+||+++|+++++++ .|++|+..+++. ....+..++..||+ ..+
T Consensus 52 ~~~La~~Aa~~aL~~agi~~~~Id----~li~~t~t~~~~-------------------~p~~a~~v~~~lgl~g~~~~~ 108 (450)
T 2f82_A 52 VISMSFNAVTSLLEKYKIDPKQIG----RLEVGSETVIDK-------------------SKSIKTFLMQLFEKCGNTDVE 108 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECCCCSCS-------------------SSCHHHHHTHHHHTTTCCCCB
T ss_pred HHHHHHHHHHHHHHHcCcCHHHCC----EEEEEecCCCCC-------------------CCcHHHHHHHHhCCcCCCCce
Confidence 457999999999999999877654 366676544321 12357788888888 358
Q ss_pred eeeecccchhHHHHHHHHHHHHhcCCC--CcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEE
Q psy1120 187 SYTVDSACSSSLYALEHAYKSIRDGHC--NAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIM 264 (883)
Q Consensus 187 s~tv~tacsSsl~Al~~A~~~l~~G~~--d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~v 264 (883)
++.|..+|+|++.||..|.++|++|.+ +.|||+|+|.+. |+....+.+.||||+++
T Consensus 109 ~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~----------------------~~~~~~~~~fGDGA~A~ 166 (450)
T 2f82_A 109 GVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV----------------------YAEGPARPTGGAAAIAM 166 (450)
T ss_dssp CCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC----------------------CSSSTTGGGCEEEEEEE
T ss_pred EEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc----------------------ccCCCCCcccccceEEE
Confidence 899999999999999999999999998 999999999742 11123677899999999
Q ss_pred EEcccccccceeEEEEeeeecc--CCCCCC---CCCCCCHH--------HHHHHHHHHHH------HcCCCCCCccEEEE
Q psy1120 265 YLQKSKDAKRVYARVVHAKTNC--DGYKEQ---GITYPSGA--------LQQRLLEDFYS------ECEVDPKNLAWIEA 325 (883)
Q Consensus 265 vL~~~~~A~~i~a~I~g~~~~~--dg~~~~---~~~~p~~~--------~~~~~i~~al~------~agl~~~dI~~ve~ 325 (883)
||++.+.. .+.....|..... |..... ......+. ....+++++++ ++|++++||||+..
T Consensus 167 ll~~~~~~-~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~did~~v~ 245 (450)
T 2f82_A 167 LIGPDAPI-VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVF 245 (450)
T ss_dssp EEESSCSE-EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGCSEEEE
T ss_pred EeccCCce-EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhcCEEEe
Confidence 99875431 1222223433322 111100 01112222 34567888886 89999999999999
Q ss_pred ecCCCCCCcHHHHHH
Q psy1120 326 HGTGTKVGDPEEVQA 340 (883)
Q Consensus 326 hgtgt~~gD~~E~~A 340 (883)
|.++++..+.+....
T Consensus 246 Hq~~~~i~~~~~~~L 260 (450)
T 2f82_A 246 HSPYNKLVQKSFARL 260 (450)
T ss_dssp CCSSHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHh
Confidence 999998877665443
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.2e-13 Score=150.96 Aligned_cols=218 Identities=11% Similarity=0.044 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCcee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~ 188 (883)
...|+.+++.+||+++|+++++++ .|++++..+++.. ...+.+++..+|+ +.|.+
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id----~vi~~t~~~~~~~-------------------p~~a~~v~~~lGl~~~~~~~ 122 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID----ALIFVSQTPNYRL-------------------PATAFVLQAELDLPASCLAL 122 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCSS-------------------SCHHHHHHHHTTCCTTSEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCC-------------------CcHHHHHHHHcCcCCCccEE
Confidence 457999999999999999998887 4888876554311 1357889999999 46999
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
.|+.+|+|++.||..|++.|++|.++.|||+|+|.+.... .+ +......++||||+++||++
T Consensus 123 ~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~~-------~d~~~~~lfGDGA~A~vl~~ 184 (354)
T 4efi_A 123 DINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMI-----------DP-------TDRSTSLLFGDAGTMTALET 184 (354)
T ss_dssp EECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGC-----------CT-------TCHHHHTTBCCEEEEEEEEE
T ss_pred eeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC-----------Cc-------cccccccccccceeEEEEee
Confidence 9999999999999999999999999999999999853311 11 11123578999999999998
Q ss_pred cccccceeEEEEeeeec-------cCCCCC--------------CCCCCCC--------HHHHHHHHHHHHHHcCCCCCC
Q psy1120 269 SKDAKRVYARVVHAKTN-------CDGYKE--------------QGITYPS--------GALQQRLLEDFYSECEVDPKN 319 (883)
Q Consensus 269 ~~~A~~i~a~I~g~~~~-------~dg~~~--------------~~~~~p~--------~~~~~~~i~~al~~agl~~~d 319 (883)
.+....+...+...+.. ..|... ..+. -+ .....++++++|+++|++++|
T Consensus 185 ~~~~~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~d 263 (354)
T 4efi_A 185 SNGDAAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLF-MDGGEIFNFTLNAVPKLVSRTLDIAGRDKDS 263 (354)
T ss_dssp CCSCCEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCE-ECHHHHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceE-EccHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 65432111112111100 011000 0000 11 133456789999999999999
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 320 LAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 320 I~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
||++-.|-.+.. =.+++.+.++-. .+++.. .-..+||+-+|+=...|..++
T Consensus 264 id~~v~Hq~~~~-----i~~~~~~~Lgl~-~ek~~~--~l~~~GNt~sasi~~~L~~~~ 314 (354)
T 4efi_A 264 YDAFLFHQANLF-----MLKHLAKKAGLP-AERVPV--NIGEYGNTSCASIPLLITTEL 314 (354)
T ss_dssp CSEEEECCCCHH-----HHHHHHHHTTCC-GGGSCC--CHHHHCBCGGGHHHHHHHHHS
T ss_pred CCEEEeCCCCHH-----HHHHHHHHhCcC-HHHHHH--HHhhhCcHHHHHHHHHHHHHH
Confidence 999999955433 345566666421 122221 125679999998776665543
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.43 E-value=8.5e-13 Score=147.94 Aligned_cols=245 Identities=13% Similarity=0.099 Sum_probs=155.9
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHH
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
+..+....++....|+.+|+.+||++||+++++++ .|++++..+ + . . ...+.++..
T Consensus 91 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~t~-~--------------~----~-p~~a~~v~~ 146 (393)
T 3ov2_A 91 FDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEIT----HLVFCSISG-I--------------D----M-PGADYRLAT 146 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEESSC-C--------------C----B-SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-C--------------C----C-CCHHHHHHH
Confidence 34445555567789999999999999999998887 478876543 1 0 1 135788999
Q ss_pred hhCCCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcc
Q psy1120 180 WLGVNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYC 256 (883)
Q Consensus 180 ~~~l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~ 256 (883)
.+|+++. .+.++.+|+|++.||..|++.|++|.++.|||+|+|.+.. .+..++. +.++......+
T Consensus 147 ~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~----------~~~~~~d--~~~~~~~~~~l 214 (393)
T 3ov2_A 147 LLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVL----------SFRGPNE--GDFEALAGQAG 214 (393)
T ss_dssp HHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGG----------TCCCCCT--TCHHHHHHHHH
T ss_pred HcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccch----------hccCCcc--cchhhhccccc
Confidence 9999874 6899999999999999999999999999999999998532 1112211 11111234678
Q ss_pred cccceEEEEEccccccc--ceeEEEEeeee-cc-CCCCC-------CC--CC-CCCH-----HHHHHHHHHHHHHcCCCC
Q psy1120 257 RSEAVCIMYLQKSKDAK--RVYARVVHAKT-NC-DGYKE-------QG--IT-YPSG-----ALQQRLLEDFYSECEVDP 317 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A~--~i~a~I~g~~~-~~-dg~~~-------~~--~~-~p~~-----~~~~~~i~~al~~agl~~ 317 (883)
+||||+|+||++.+... ...-.+...+. .. +.... .+ +. .+.. ....++++++|+++|+++
T Consensus 215 FGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~ 294 (393)
T 3ov2_A 215 FGDGAGAVVVGADPLEGIEKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVRE 294 (393)
T ss_dssp BCCEEEEEEEESSCCTTTCCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCS
T ss_pred ccCccEEEEEEecCCCcccCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 99999999999765431 11123322211 11 10000 00 00 1111 123468999999999997
Q ss_pred -CCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHHHHHHH-hhcCCCC
Q psy1120 318 -KNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVTKVILA-MENGIIP 387 (883)
Q Consensus 318 -~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li~~~l~-l~~~~ip 387 (883)
+|| ++-.|-.+ .-=..++.+.++-. .+++..+ .+-..+||+-+|+=...|-.+... ++.|.+.
T Consensus 295 ~~di-~~v~Hq~n-----~~i~~~v~~~Lgl~-~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~ 360 (393)
T 3ov2_A 295 WNDV-FWVAHPGN-----WAIIDAIEAKLQLS-PDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRST 360 (393)
T ss_dssp GGGS-EEEECCCC-----HHHHHHHHHHHTCC-TTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSB
T ss_pred ccCc-EEEECCCC-----hHHHHHHHHHcCCC-HHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcC
Confidence 888 89999333 33345666666421 1223221 122457999999877766655533 2335443
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.41 E-value=7.7e-13 Score=148.00 Aligned_cols=233 Identities=13% Similarity=0.127 Sum_probs=147.1
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHH
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
+..|....++....|+.+|+.+||++||+++++++ .|++++..+ +. . ...+.+++.
T Consensus 85 ~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId----~li~~t~t~-~~------------------~-p~~a~~v~~ 140 (387)
T 3oit_A 85 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSG-AH------------------V-PGVDFRLVP 140 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEESSC-CE------------------E-SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeCC-CC------------------c-ccHHHHHHH
Confidence 44555566667889999999999999999998887 477776543 10 1 135778999
Q ss_pred hhCCCCc---eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcc
Q psy1120 180 WLGVNGP---SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYC 256 (883)
Q Consensus 180 ~~~l~Gp---s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~ 256 (883)
.+|+++. .+.++.+|+|++.||..|...|++|.++.|||+|+|.+... +..++. +.++......+
T Consensus 141 ~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~----------~~~~~d--~~~~~~~~~~l 208 (387)
T 3oit_A 141 LLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMY----------FTGPDE--GCFRTLLVQGL 208 (387)
T ss_dssp HHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGT----------CCCCCS--SSCHHHHHHHH
T ss_pred HhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchh----------ccCccc--cchHhhhcccc
Confidence 9999873 68999999999999999999999999999999999985411 111111 11111234678
Q ss_pred cccceEEEEEcccccc-cceeEEEEeeeecc--CCCCC-------CC--C-CCCC-----HHHHHHHHHHHHHHc----C
Q psy1120 257 RSEAVCIMYLQKSKDA-KRVYARVVHAKTNC--DGYKE-------QG--I-TYPS-----GALQQRLLEDFYSEC----E 314 (883)
Q Consensus 257 ~gEGa~~vvL~~~~~A-~~i~a~I~g~~~~~--dg~~~-------~~--~-~~p~-----~~~~~~~i~~al~~a----g 314 (883)
+||||+|+||++.+.. ......+.+.+... +.... .+ + ..+. .....++++++|+++ |
T Consensus 209 FGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~g 288 (387)
T 3oit_A 209 FGDGAAAVIVGADADDVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDG 288 (387)
T ss_dssp BCCEEEEEEEESSCCSSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC---
T ss_pred cccceEEEEEecCCCcccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCC
Confidence 9999999999875522 12233444432211 11000 01 0 0121 234567888899999 9
Q ss_pred CCCCCcc--EEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHHH
Q psy1120 315 VDPKNLA--WIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVTK 376 (883)
Q Consensus 315 l~~~dI~--~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li~ 376 (883)
++ |++ ++-.|-.+. -=..++.+.++-. .+++... .+-...||+-+||=...|-.
T Consensus 289 l~--d~d~~~~v~Hq~n~-----~il~~v~~~Lgl~-~ek~~~s~~~l~~~GNtssAsip~~L~~ 345 (387)
T 3oit_A 289 GG--GWNDLFWAVHPGSS-----TIMDQVDAALGLE-PGKLAASRRVLSDYGNMSGATVIFALDE 345 (387)
T ss_dssp -----GGGSEEEECCCCH-----HHHHHHHHHHTCC-TTTTHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred CC--cccccEEEECCCCH-----HHHHHHHHHcCCC-HHHHHHHHHHHHHhCchHHhHHHHHHHH
Confidence 87 566 999994433 3345566666421 1222221 12245699988876665554
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.35 E-value=8.4e-12 Score=141.86 Aligned_cols=225 Identities=15% Similarity=0.140 Sum_probs=140.8
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-c-e
Q psy1120 110 PMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-P-S 187 (883)
Q Consensus 110 p~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-p-s 187 (883)
....|+.+|+.+||++||+++++|+ .|+++++. ++. ....+.+|...+|++. + .
T Consensus 109 ~a~~La~~Aa~~AL~~agi~~~dId----~li~~t~t-~~~-------------------~P~~a~~v~~~LGl~~~~~~ 164 (465)
T 3e1h_A 109 DGVPLAVEASRKAMAEARLVPAQIT----HMVSTTCT-DSA-------------------NPGYDHYVAKELGLSDRLEK 164 (465)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSS-CCC-------------------SSCHHHHHHHHHTCCTTCEE
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeC-CCC-------------------CCcHHHHHHHHhCCCCCeeE
Confidence 3458999999999999999999887 37777654 321 1125778999999976 4 5
Q ss_pred eee-cccchhHHHHHHHHHHHHhc----CCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceE
Q psy1120 188 YTV-DSACSSSLYALEHAYKSIRD----GHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVC 262 (883)
Q Consensus 188 ~tv-~tacsSsl~Al~~A~~~l~~----G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~ 262 (883)
+.| ..+|++++.||..|.+.|++ |.++.|||+|+|.+..... ....... ...+......++||||+
T Consensus 165 ~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~-~~~~~~~--------~~~~d~~t~~LFGDGAa 235 (465)
T 3e1h_A 165 VLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVR-SELESID--------ALQETRIGIALFSDCAS 235 (465)
T ss_dssp EEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHH-HHHHHHH--------HHTCCCCHHHHBCCEEE
T ss_pred EEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcC-ccccccc--------cccccccccccccccee
Confidence 888 79999999999999999997 9999999999999543221 1111000 01122345678999999
Q ss_pred EEEEcccccc---cceeEEEEeeeeccC--CCCC-------CCC---CCCC-----HHHHHHHHHHHHHH-------cCC
Q psy1120 263 IMYLQKSKDA---KRVYARVVHAKTNCD--GYKE-------QGI---TYPS-----GALQQRLLEDFYSE-------CEV 315 (883)
Q Consensus 263 ~vvL~~~~~A---~~i~a~I~g~~~~~d--g~~~-------~~~---~~p~-----~~~~~~~i~~al~~-------agl 315 (883)
|+||++.+.. ...+..+.+...... +... .++ ..+. ......+++++|++ +|+
T Consensus 236 AvVl~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl 315 (465)
T 3e1h_A 236 AVILSNGIGEAPGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQ 315 (465)
T ss_dssp EEEEECCTTCCTTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSC
T ss_pred EEEEEccCCCccccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCC
Confidence 9999875432 222334444322111 1000 000 0011 23456778888887 689
Q ss_pred CCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHH
Q psy1120 316 DPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSV 374 (883)
Q Consensus 316 ~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~l 374 (883)
+++||||+ .|-- ..-=..++.+.++-. ..++... .+-...||+-+|+=...|
T Consensus 316 ~~~DId~~-~Hqa-----n~rIl~~v~~~Lgl~-~ek~~~s~~~l~~yGNtsSASip~aL 368 (465)
T 3e1h_A 316 KPADFDWA-MHPG-----GATILSGAESAMGLT-PEHMRASYDRYINHGNSSSATIFSVL 368 (465)
T ss_dssp SGGGSEEE-ECCS-----SHHHHHHHHHHHTCC-GGGGHHHHHHHHHHCBCGGGHHHHHH
T ss_pred CHHHceEE-ecCC-----ChHHHHHHHHHhCcC-HHHhHHHHHHHhcceechHhHHHHHH
Confidence 99999999 9933 333455666666421 1122110 011234888887644333
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.35 E-value=3.2e-12 Score=137.04 Aligned_cols=186 Identities=14% Similarity=0.169 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTV 190 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv 190 (883)
...|+.+|+.+||++||+++++++ .|++|+..+ + .+.+..+...++ -|.+.|
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~DID----~II~gt~t~-q---------------------~~~A~~va~~Lg--ipafdV 106 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKEDID----IFLAGDLLN-Q---------------------NVTANYVARHLK--IPFLCL 106 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCS----EEEEEESSS-S---------------------STTHHHHHHHHC--CCEEEB
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCC-c---------------------hhHHHHHHHHhC--CCEEEe
Confidence 357999999999999999999987 377776432 0 113455666664 389999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
+.+|||++.||..|..+|++|.+|.|||+|+|.+.......-|. ...+..+|.. -...++|||++||.+..
T Consensus 107 ~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p-----~e~g~q~p~t----a~~t~dGAGA~VL~~~g 177 (347)
T 3lma_A 107 FGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYP-----TEYGGQKPGT----ATSTVTGSGAVVLSQQP 177 (347)
T ss_dssp CCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-------------------------CCCEEEEEEEESSC
T ss_pred cChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCc-----chhcccCCch----hcEEccceeEEEEEecC
Confidence 99999999999999999999999999999999865432110000 0011122221 12346899999999755
Q ss_pred cccceeEEEEeeeeccCCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHH--HH
Q psy1120 271 DAKRVYARVVHAKTNCDGYKEQGITYPS------GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQA--LE 342 (883)
Q Consensus 271 ~A~~i~a~I~g~~~~~dg~~~~~~~~p~------~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~A--i~ 342 (883)
...+ |++...... ...++..|. ..+..+.|.+.|+++|++|+|+|||-.+ |.-++.. +.
T Consensus 178 ~~p~----I~~~t~Gkv--vd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg-------dL~q~g~~il~ 244 (347)
T 3lma_A 178 GGIK----ITSATVGRV--IDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTG-------DLSGVGSPILK 244 (347)
T ss_dssp CSEE----EEEEECCCC--BCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE-------SCHHHHHHHHH
T ss_pred CCCc----eeeeeeeee--eccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecC-------ChHHHHHHHHH
Confidence 4222 333222110 012233332 3345577899999999999999999964 5445543 55
Q ss_pred HhhC
Q psy1120 343 NVFC 346 (883)
Q Consensus 343 ~~f~ 346 (883)
+++.
T Consensus 245 ~l~~ 248 (347)
T 3lma_A 245 DLLK 248 (347)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.2e-11 Score=137.00 Aligned_cols=217 Identities=15% Similarity=0.232 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+|+.+||+++|+++++++ .|++++.++++.. ...+.+|...||++. +++.
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~~~-------------------P~~a~~v~~~LGl~~~~a~d 118 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQGSDLD----AVIVSTVTFPHAT-------------------PSAAALVAHEIGATPAPAYD 118 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCS----EEEEECSCCSCSS-------------------SCHHHHHHHHTTCTTSCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCCC-------------------CchHHHHHHHhCCCCceEEE
Confidence 456999999999999999999887 3777776654311 125678999999965 7888
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|..+|++++.||..|...|++|..+.+||.++|.+... +. +......+.+||||++++|++.
T Consensus 119 i~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~-----------~d-------~~~~~~~~lfgDGA~A~vl~~~ 180 (350)
T 4ewp_A 119 VSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDV-----------VD-------PTDRSISFLLGDGAGAVIVAAS 180 (350)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------CC-------TTCTTTGGGBCEEEEEEEEEEE
T ss_pred eecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceec-----------cc-------ccccccccccccchheeeeecc
Confidence 99999999999999999999999999999999984321 11 1123356789999999999876
Q ss_pred ccccceeEEEEeee-ec-----------------------cCCCC---CCCCCC----CCH--------HHHHHHHHHHH
Q psy1120 270 KDAKRVYARVVHAK-TN-----------------------CDGYK---EQGITY----PSG--------ALQQRLLEDFY 310 (883)
Q Consensus 270 ~~A~~i~a~I~g~~-~~-----------------------~dg~~---~~~~~~----p~~--------~~~~~~i~~al 310 (883)
+... +.....++. .. .+... ...... -++ ....++++++|
T Consensus 181 ~~~~-~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L 259 (350)
T 4ewp_A 181 DEPG-ISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREAL 259 (350)
T ss_dssp SSCC-BCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHH
T ss_pred cCCC-ccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHH
Confidence 5432 111111110 00 00000 000000 112 12457899999
Q ss_pred HHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHH
Q psy1120 311 SECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTK 376 (883)
Q Consensus 311 ~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~ 376 (883)
+++|++++|||++-.|-.+.. =.+++.+.++-.. +.... ..-..+||+-+||=...|..
T Consensus 260 ~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl~~-~~~~~-~~l~~~GNtssasi~~~L~~ 318 (350)
T 4ewp_A 260 DAAGVEPEDLAAFIPHQANMR-----IIDEFAKQLKLPE-SVVVA-RDIADAGNTSAASIPLAMHR 318 (350)
T ss_dssp HHHTCCGGGEEEEEECCSCHH-----HHHHHHHHTTCCT-TSEEC-CTHHHHCBCGGGHHHHHHHH
T ss_pred HhhcCChhHhceEEecCCCHH-----HHHHHHHHcCcCh-HhEEe-cccccccchHHHHHHHHHHH
Confidence 999999999999999954433 3455666664211 12211 11134699888875555443
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=6.6e-12 Score=140.18 Aligned_cols=216 Identities=12% Similarity=0.109 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--cee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~ 188 (883)
...|+.+|+.+||+++| +++++ .|++|+..+++.. ...+..|...||+++ +++
T Consensus 56 ~~~La~~Aa~~aL~~a~--~~~Id----~li~~t~t~~~~~-------------------ps~a~~v~~~LGl~~~~~~~ 110 (388)
T 3v4n_A 56 IVTFAANAAEAILTKED--KEAID----MVIVGTESSIDES-------------------KAAAVVLHRLMGIQPFARSF 110 (388)
T ss_dssp HHHHHHHHHHTTCCHHH--HHHEE----EEEEECSSCSBSS-------------------SCHHHHHHHHTTCCSSCEEE
T ss_pred HHHHHHHHHHHHHHhCC--cccCC----EEEEEeccCCCcC-------------------ccHHHHHHHHcCCCCCceEe
Confidence 45799999999999997 55554 4777776554211 135778999999975 889
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
.+..+|+|++.||..|...|++|.++.|||+|+|.+... ++ ..+....||||+|+||++
T Consensus 111 dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~--------------------~~-~~~~~lfGDGA~A~ll~~ 169 (388)
T 3v4n_A 111 EIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYG--------------------LN-SGGEPTQGAGAVAMLVSS 169 (388)
T ss_dssp EEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCC--------------------TT-CTTGGGCEEEEEEEEEEE
T ss_pred ehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhccc--------------------CC-CCCCCccccceeEEEeec
Confidence 999999999999999999999999999999999984321 11 122578899999999987
Q ss_pred cccccceeEEEEee-eeccCCC---CCCCCCCC--C--------HHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCc
Q psy1120 269 SKDAKRVYARVVHA-KTNCDGY---KEQGITYP--S--------GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGD 334 (883)
Q Consensus 269 ~~~A~~i~a~I~g~-~~~~dg~---~~~~~~~p--~--------~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD 334 (883)
... +...-.+. +...+.. ...+...| + ......+++++|+++|++++||||+-.|-..+..+-
T Consensus 170 ~~~---il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~ 246 (388)
T 3v4n_A 170 EPR---ILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGK 246 (388)
T ss_dssp SCS---SEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHH
T ss_pred CCC---ceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHH
Confidence 432 21111111 1111110 00000001 1 234567889999999999999999999964433111
Q ss_pred HHHH-------HHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHH
Q psy1120 335 PEEV-------QALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 335 ~~E~-------~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
..-. +++.+.++-. .++ .-..-..+||+.+||=...|..++
T Consensus 247 ka~~ril~~~~~~~~~~l~~~-~e~--~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 247 KALLAKISDQTEAEQERILAR-YEE--SIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp HHHHHHSTTSCHHHHHHHHHH-HHH--HTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHhcccHHHHHHhCCC-HHH--HhhHHHhcCchHHHHHHHHHHHHH
Confidence 1000 1122222100 001 112335679999998776665544
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.17 E-value=3e-10 Score=127.39 Aligned_cols=217 Identities=12% Similarity=0.034 Sum_probs=142.5
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--c
Q psy1120 109 DPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--P 186 (883)
Q Consensus 109 dp~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--p 186 (883)
+....|+.+|+.+||+++|+++++++ .|++++..+. . . ...+.+++..+|++. +
T Consensus 135 ~~~~~La~~Aa~~AL~~agi~~~dId----~li~~t~t~~-~------------------~-P~~a~~v~~~LGl~~~~~ 190 (413)
T 3v7i_A 135 EAVQAYGERAARGALQIAGLDVADVD----CLITSNSTTP-A------------------L-PGLDVALANRLPLRGDTM 190 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECCSSC-C------------------S-SCHHHHHHHHTTCCTTCE
T ss_pred cCHHHHHHHHHHHHHHHhCcCHHHCC----EEEEEccCCC-C------------------c-CHHHHHHHHHhCCCCCce
Confidence 45668999999999999999998887 4888875431 0 1 125678999999976 4
Q ss_pred eeee-cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCC----Ccccccce
Q psy1120 187 SYTV-DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAAN----GYCRSEAV 261 (883)
Q Consensus 187 s~tv-~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~----G~~~gEGa 261 (883)
.+.| +.+|+|++.||..|++.|++|.++.|||+|+|.+... +.++ |.+.+ ..++||||
T Consensus 191 ~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~-----------~~~~------d~~~~~lv~~~LFGDGA 253 (413)
T 3v7i_A 191 LLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTT-----------YQPA------DDTLESLIVRLLFADTA 253 (413)
T ss_dssp EEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG-----------CCSS------CCSTTHHHHHHHBCCEE
T ss_pred EEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc-----------cCcc------ccchhhhhcceeecccc
Confidence 5777 9999999999999999999999999999999985421 1111 11111 56899999
Q ss_pred EEEEEcccccccceeEEEEeeeecc--CCCCC-------CC--C-CCCC----HHHHHHHHHHHHH------HcCCCCCC
Q psy1120 262 CIMYLQKSKDAKRVYARVVHAKTNC--DGYKE-------QG--I-TYPS----GALQQRLLEDFYS------ECEVDPKN 319 (883)
Q Consensus 262 ~~vvL~~~~~A~~i~a~I~g~~~~~--dg~~~-------~~--~-~~p~----~~~~~~~i~~al~------~agl~~~d 319 (883)
+|+||++.+.... .-+|.+..... ++... .+ + ..+. ......+++++|+ ++|++
T Consensus 254 aAvvl~~~~~~~~-~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~~gl~--- 329 (413)
T 3v7i_A 254 VAAVVTGRPRPES-VLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDPSSWH--- 329 (413)
T ss_dssp EEEEEESSCCTTE-EEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSCTTCC---
T ss_pred EEEEEEecCCCCC-CEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhccccccCCCc---
Confidence 9999987653221 12344432111 11000 00 0 0111 2235578889999 89987
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHhhC--CCCCCCee--ecccCCCCCCCcccchhhHHHHHH
Q psy1120 320 LAWIEAHGTGTKVGDPEEVQALENVFC--PGRTTPLL--IGSVKSNIGHSEPASGVCSVTKVI 378 (883)
Q Consensus 320 I~~ve~hgtgt~~gD~~E~~Ai~~~f~--~~~~~~~~--igs~K~~~GH~~~AsG~~~li~~~ 378 (883)
||++-.|-.+. -=..++.+.++ -. .+++. ...+. .||+-+|+=...|-.+.
T Consensus 330 id~~v~Hq~~~-----~il~~v~~~Lg~~l~-~ek~~~s~~~l~--~GNtssAsi~~~L~~~~ 384 (413)
T 3v7i_A 330 PDVLLAHPGGT-----RVLEYMEQTMPDEWP-SGLLSYSRDSYT--SGNRGGAAVFDILRRAH 384 (413)
T ss_dssp CCEEEEECSSH-----HHHHHHHHHSCSSCC-SCSTHHHHHHHT--TCBCGGGHHHHHHHHHH
T ss_pred eeEEEECCCCh-----HHHHHHHHHhCCCCC-HHHhhccceEec--eeChHHHHHHHHHHHHH
Confidence 99999994433 33566666675 21 22221 22333 79998888666655544
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.6e-09 Score=124.09 Aligned_cols=175 Identities=8% Similarity=0.100 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC---CC-c
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV---NG-P 186 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l---~G-p 186 (883)
...|+.+|+.+||+++|+++++|+ .|++++.++++.. ...+..|...|++ ++ +
T Consensus 73 ~~~La~~Aa~~aL~~agi~~~dId----~li~~T~t~~~~~-------------------ps~a~~v~~~L~~lG~~~~~ 129 (478)
T 2p8u_A 73 INSLCMTVVQNLMERNNLSYDCIG----RLEVGTETIIDKS-------------------KSVKTNLMQLFEESGNTDIE 129 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECSCCSCSS-------------------SCHHHHHGGGTTTTTCCCCB
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCcccC-------------------ccHHHHHHHHHhhcCCCCce
Confidence 467999999999999999887765 3777776543210 1245667744444 33 7
Q ss_pred eeeecccchhHHHHHHHHHHHHhcCC--CCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEE
Q psy1120 187 SYTVDSACSSSLYALEHAYKSIRDGH--CNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIM 264 (883)
Q Consensus 187 s~tv~tacsSsl~Al~~A~~~l~~G~--~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~v 264 (883)
.+.|..+|+|++.||..|...|++|. ++.|||.|+|.. . |+........||||+|+
T Consensus 130 ~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia-~---------------------~~~~~~~~~fGdGA~A~ 187 (478)
T 2p8u_A 130 GIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA-V---------------------YATGNARPTGGVGAVAL 187 (478)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE-C---------------------CCSSTTGGGCEEEEEEE
T ss_pred EEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee-c---------------------ccCCCCCCcccceeEEE
Confidence 78899999999999999999999999 999999999941 0 11122346889999999
Q ss_pred EEcccccccceeE-EEEeeeeccCCCCCCCCCCC---------CHHH--------H---HHHHHHHHH--------HcCC
Q psy1120 265 YLQKSKDAKRVYA-RVVHAKTNCDGYKEQGITYP---------SGAL--------Q---QRLLEDFYS--------ECEV 315 (883)
Q Consensus 265 vL~~~~~A~~i~a-~I~g~~~~~dg~~~~~~~~p---------~~~~--------~---~~~i~~al~--------~agl 315 (883)
||.+.+.. ++. .+.|..+. +.. .+..| ++.. . .+.+++.++ ++|+
T Consensus 188 Ll~~~~~~--~l~~~~~gs~~~-~~~---d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~ 261 (478)
T 2p8u_A 188 LIGPNAPL--IFERGLRGTHMQ-HAY---DFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDF 261 (478)
T ss_dssp EEESSCSE--EECTTCCEEEEC-CCC---SEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred EEecCCCc--eEeeccceeccc-chh---heeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCC
Confidence 99864321 100 00122111 111 11111 1111 1 134666666 7899
Q ss_pred CCCCccEEEEecCCCCCCcHH
Q psy1120 316 DPKNLAWIEAHGTGTKVGDPE 336 (883)
Q Consensus 316 ~~~dI~~ve~hgtgt~~gD~~ 336 (883)
+++||||+-.|-.+..+.+.+
T Consensus 262 ~~~did~~v~H~~~~ki~~~~ 282 (478)
T 2p8u_A 262 TLNDFGFMIFHSPYCKLVQKS 282 (478)
T ss_dssp CGGGCSEEEECCSSHHHHHHH
T ss_pred ChHHcCEEEecCCcHHHHHHH
Confidence 999999999997776654443
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.72 E-value=3.6e-08 Score=112.75 Aligned_cols=177 Identities=11% Similarity=0.062 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC----c
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG----P 186 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G----p 186 (883)
..-|+.+|+.+||+++|+++++|+ -|++++.++++.. -..+..|...|++.| +
T Consensus 54 ~~~ma~~Aa~~al~~a~i~~~~Id----~ii~aT~t~~~~~-------------------ps~a~~v~~~l~~~g~~~~~ 110 (460)
T 2wya_A 54 INSLCLTVVQRLMERIQLPWDSVG----RLEVGTETIIDKS-------------------KAVKTVLMELFQDSGNTDIE 110 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE----EEEEECSCCSCSS-------------------SCHHHHHGGGTGGGTCCCCB
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCC-------------------CchHHHHHHHHhccCCCCee
Confidence 356999999999999999988765 3778887665321 124567888887755 3
Q ss_pred eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEE
Q psy1120 187 SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYL 266 (883)
Q Consensus 187 s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL 266 (883)
++-+..||++++.||..|...|++|..+.+++..+..... -|.........|+||+++++
T Consensus 111 a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~--------------------~~~d~~~~~~~GdGA~A~l~ 170 (460)
T 2wya_A 111 GIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIA--------------------VYPSGNARPTGGAGAVAMLI 170 (460)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE--------------------CCCSSTTGGGCEEEEEEEEE
T ss_pred EechhhhhhhHHHHHHHHHHHHHhccccceEEEEEecccc--------------------ccccccccccCcchHHhhhc
Confidence 5778999999999999999999999887655443332111 01222344567999999999
Q ss_pred cccccccceeEEEEeeeecc--CCCCCC-CCCCC--CHH-------------------HHHHHHHHHHHHcCCCCCCccE
Q psy1120 267 QKSKDAKRVYARVVHAKTNC--DGYKEQ-GITYP--SGA-------------------LQQRLLEDFYSECEVDPKNLAW 322 (883)
Q Consensus 267 ~~~~~A~~i~a~I~g~~~~~--dg~~~~-~~~~p--~~~-------------------~~~~~i~~al~~agl~~~dI~~ 322 (883)
...+...-.. ...+..... |-.... +-..| ++. ....+++++++++|++++|+||
T Consensus 171 ~~~~~~~~~~-~~~~~~~~~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~~d~d~ 249 (460)
T 2wya_A 171 GPKAPLALER-GLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQY 249 (460)
T ss_dssp ESSCSEEECT-TCCEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGCSE
T ss_pred ccCCcceeec-ccccccccchhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhh
Confidence 8754321000 001111110 100000 00111 111 1123455666788999999999
Q ss_pred EEEecCCCC
Q psy1120 323 IEAHGTGTK 331 (883)
Q Consensus 323 ve~hgtgt~ 331 (883)
+-.|-....
T Consensus 250 ~v~Hqp~~r 258 (460)
T 2wya_A 250 MIFHTPFCK 258 (460)
T ss_dssp EEECCSSHH
T ss_pred hhhcccchH
Confidence 999965543
|
| >3kg8_A CURJ; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.45A {Lyngbya majuscula} | Back alignment and structure |
|---|
Probab=98.23 E-value=4.6e-07 Score=98.07 Aligned_cols=42 Identities=10% Similarity=0.250 Sum_probs=39.0
Q ss_pred CeEEEEEEecCCCCCccCCCccCCeeEechHHHHHHHHhccc
Q psy1120 840 GERTVVVSLKDDEMEFVSGHMIDGRNLFPATGYLATVCNVSE 881 (883)
Q Consensus 840 ~~~~~~~~l~~~~~p~l~dH~v~g~~v~P~a~y~ema~ea~~ 881 (883)
....|++.|+.++.|||+||+|+|++||||++|+|||+||++
T Consensus 22 ~~~~w~~~l~~~~~pwL~dH~v~g~~v~Pga~ylema~~A~~ 63 (308)
T 3kg8_A 22 KEIFFESYFSTENLPFLADHIVYEQVVVPGASHISLLLAAAS 63 (308)
T ss_dssp SSEEEEEEECTTTSGGGGGEEETTEEEECHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCCChhhcCEECCEEEEcHHHHHHHHHHHHH
Confidence 446699999999999999999999999999999999999974
|
| >3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.77A {Lyngbya majuscula} | Back alignment and structure |
|---|
Probab=98.19 E-value=5.7e-07 Score=96.64 Aligned_cols=42 Identities=12% Similarity=0.282 Sum_probs=39.7
Q ss_pred CeEEEEEEecCCCCCccCCCccCCeeEechHHHHHHHHhccc
Q psy1120 840 GERTVVVSLKDDEMEFVSGHMIDGRNLFPATGYLATVCNVSE 881 (883)
Q Consensus 840 ~~~~~~~~l~~~~~p~l~dH~v~g~~v~P~a~y~ema~ea~~ 881 (883)
.+..|+..|+.++.|||+||+|+|++||||++|+|||++|++
T Consensus 22 ~~~~w~~~l~~~~~pwL~dH~v~g~~v~Pga~ylema~~A~~ 63 (293)
T 3kg7_A 22 GQTIYHQDINLNNHPWIGDHRVYDTPVIPGVSYIAMTLAAVG 63 (293)
T ss_dssp CCEEEEEEESTTTCGGGGGEEETTEEBCCTTHHHHHHHHHHC
T ss_pred CceEEEEEEcCCCCchhhcCEECCEEEecHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999986
|
| >3kg6_A CURF; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.70A {Lyngbya majuscula} | Back alignment and structure |
|---|
Probab=98.18 E-value=6.4e-07 Score=95.72 Aligned_cols=42 Identities=21% Similarity=0.472 Sum_probs=39.0
Q ss_pred CeEEEEEEecCCCCCccCCCccCCeeEechHHHHHHHHhccc
Q psy1120 840 GERTVVVSLKDDEMEFVSGHMIDGRNLFPATGYLATVCNVSE 881 (883)
Q Consensus 840 ~~~~~~~~l~~~~~p~l~dH~v~g~~v~P~a~y~ema~ea~~ 881 (883)
....|++.|+.++.|||+||+|+|++||||++|+|||++|++
T Consensus 18 ~~~~~~~~l~~~~~p~L~dH~v~g~~v~Pga~ylema~~A~~ 59 (285)
T 3kg6_A 18 DQHRFQSYIGAESPGYLNHHQVFGKVLFPSTGYLEIAASAGK 59 (285)
T ss_dssp SEEEEEEEEBTTBTGGGGGEEETTEEECCHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCchhhCCEECCEEEecHHHHHHHHHHHHH
Confidence 456799999999999999999999999999999999999975
|
| >3kg9_A CURK; polyketide synthase, double hotdog fold, dehydratase, lyase; 1.70A {Lyngbya majuscula} | Back alignment and structure |
|---|
Probab=98.16 E-value=6.6e-07 Score=96.15 Aligned_cols=42 Identities=29% Similarity=0.490 Sum_probs=39.4
Q ss_pred CeEEEEEEecCCCCCccCCCccCCeeEechHHHHHHHHhccc
Q psy1120 840 GERTVVVSLKDDEMEFVSGHMIDGRNLFPATGYLATVCNVSE 881 (883)
Q Consensus 840 ~~~~~~~~l~~~~~p~l~dH~v~g~~v~P~a~y~ema~ea~~ 881 (883)
.+..|++.|+.++.|||+||+|+|++||||++|+|||+||++
T Consensus 23 ~~~~w~~~l~~~~~pwL~dH~v~g~~v~Pga~ylema~~A~~ 64 (296)
T 3kg9_A 23 NQHHFQSYLTAESPAYLSQHQVFNKVLFPATGYLEIAAAVGK 64 (296)
T ss_dssp SEEEEEEEEETTBSGGGGGEEETTEEBCCHHHHHHHHHHHHH
T ss_pred CceEEEEEECCCCCchhHhCEECCEEEehHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999975
|
| >3el6_A Erythromycin dehydratase; dehydratase double hotdog fold CIS-proline, acyltransferase, antibiotic biosynthesis; 1.85A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=98.08 E-value=1.3e-06 Score=94.77 Aligned_cols=43 Identities=23% Similarity=0.418 Sum_probs=40.0
Q ss_pred CCeEEEEEEecCCCCCccCCCccCCeeEechHHHHHHHHhccc
Q psy1120 839 SGERTVVVSLKDDEMEFVSGHMIDGRNLFPATGYLATVCNVSE 881 (883)
Q Consensus 839 ~~~~~~~~~l~~~~~p~l~dH~v~g~~v~P~a~y~ema~ea~~ 881 (883)
.....|+..|+.++.|||+||+|+|++||||++|+|||++|++
T Consensus 49 ~~~~~~~~~l~~~~~pwL~dH~V~G~~v~Pga~ylemal~A~~ 91 (313)
T 3el6_A 49 HGGAVFTGRLSTDEQPWLAEHVVGGRTLVPGSVLVDLALAAGE 91 (313)
T ss_dssp TSCEEEEEEECTTTCGGGGGEEETTEEBCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEECCCCCchhhcCEECCEEEecHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999975
|
| >3hrq_A PKS, aflatoxin biosynthesis polyketide synthase; hot-DOG fold, iterative type I PKS, norsolorinic acid, product template domain; HET: PLM; 1.80A {Aspergillus parasiticus} PDB: 3hrr_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.7e-06 Score=95.73 Aligned_cols=43 Identities=19% Similarity=0.333 Sum_probs=38.0
Q ss_pred CCeEEEEEEecCCC-CCccCCCccCCeeEechHHHHHHHHhccc
Q psy1120 839 SGERTVVVSLKDDE-MEFVSGHMIDGRNLFPATGYLATVCNVSE 881 (883)
Q Consensus 839 ~~~~~~~~~l~~~~-~p~l~dH~v~g~~v~P~a~y~ema~ea~~ 881 (883)
.+...|+.+++... .|||+||+|+|++||||++|++||+||++
T Consensus 21 ~~~~~f~~~~~~~~~~pwL~dH~V~g~~v~P~agyl~mAleAa~ 64 (357)
T 3hrq_A 21 GATLVVETDISRKDVNGLARGHLVDGIPLCTPSFYADIAMQVGQ 64 (357)
T ss_dssp EEEEEEEEETTSTTTHHHHCCEEETTEEECCHHHHHHHHHHHHH
T ss_pred CcEEEEEECCCCHHHHHHhcCCeECCeeccCHHHHHHHHHHHHH
Confidence 45678999999655 58999999999999999999999999974
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0043 Score=80.20 Aligned_cols=47 Identities=26% Similarity=0.285 Sum_probs=42.2
Q ss_pred CCHHHHHHHhcCCccHHHHHHHhh-cCC--EEEEECCCccchHHHHhhcC
Q psy1120 714 SSAEYHTNNLLSPVLFEETSRHIQ-KNA--ITLEIAPHGLLQAILRRSLP 760 (883)
Q Consensus 714 ~~~~y~~~~l~~pV~f~~ai~~l~-~~~--~~iEiGP~~~L~~~i~~~l~ 760 (883)
...+.+++|+.+||||.++++.|. +.+ .|||+||+.+|+++++++++
T Consensus 13 li~~~L~~Q~~~PVrW~~t~~~l~~~~gv~~~iE~GPg~vL~gl~kr~~~ 62 (1887)
T 2uv8_A 13 LLTELLAYQFASPVRWIETQDVFLKDFNTERVVEIGPSPTLAGMAQRTLK 62 (1887)
T ss_dssp HHHHHHHHTTTSCEEHHHHHHHHHHTSCCSEEEEESSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHhcCCCcEEEEeCCchhhhchHHHhhh
Confidence 357889999999999999999997 665 69999999999999999874
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=86.48 E-value=0.42 Score=61.99 Aligned_cols=45 Identities=29% Similarity=0.374 Sum_probs=39.5
Q ss_pred HHHHHHHhcCCccHHHHHHHhhcC---CEEEEECCCccchHHHHhhcC
Q psy1120 716 AEYHTNNLLSPVLFEETSRHIQKN---AITLEIAPHGLLQAILRRSLP 760 (883)
Q Consensus 716 ~~y~~~~l~~pV~f~~ai~~l~~~---~~~iEiGP~~~L~~~i~~~l~ 760 (883)
-+.+.-|+.+||||-++-+.|... ..||||||.++|++|.++++.
T Consensus 15 ~eLla~qfaspvrwieTQd~l~~~~~~er~vEiGp~~tl~~ma~rt~~ 62 (1878)
T 2uv9_A 15 VELLAYQFAMPVRWIETQDVILAEKRTERIVEIGPSDTLGGMARRTLQ 62 (1878)
T ss_dssp HHHHHGGGGSCCCHHHHHHHHHTTSCCSEEECCSSSCTTHHHHHHHHH
T ss_pred HHHHHHHhhCcchhhhHHHHHccCcCceEEEEECCcHHHHHHHHHHHH
Confidence 467888999999999999988853 468999999999999999984
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 883 | ||||
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 9e-49 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 4e-42 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 1e-39 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 2e-39 | |
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 8e-29 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 2e-25 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 3e-25 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 3e-25 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 5e-23 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 1e-22 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 1e-21 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 2e-21 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 1e-19 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 1e-18 | |
| d1nm2a1 | 253 | c.19.1.1 (A:0-133,A:196-314) Catalytic domain of m | 3e-17 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 5e-16 | |
| d1mlaa1 | 235 | c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m | 4e-15 | |
| d1mlaa1 | 235 | c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m | 2e-04 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 2e-13 | |
| d1nm2a2 | 62 | d.58.23.1 (A:134-195) Probable ACP-binding domain | 1e-07 | |
| d1mlaa2 | 70 | d.58.23.1 (A:128-197) Probable ACP-binding domain | 1e-04 |
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 171 bits (433), Expect = 9e-49
Identities = 50/252 (19%), Positives = 91/252 (36%), Gaps = 21/252 (8%)
Query: 35 ICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFD 94
+ +TG+ + P F + + R +P R
Sbjct: 4 VVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFD-----ASALPVRIAAEV----DV 54
Query: 95 AAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF 154
+ K+ +D + L A+ DAG+ P+ L + G +G E
Sbjct: 55 DPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEA 114
Query: 155 YEKL-------QINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKS 207
++ +I+ F I M + ++ G GPS TV +AC++ AL A +
Sbjct: 115 QSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRM 174
Query: 208 IRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRSEAVC 262
I+ G + GG + P FA + LS P+ + F + +G+ E
Sbjct: 175 IQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAG 234
Query: 263 IMYLQKSKDAKR 274
++ L+ + AK+
Sbjct: 235 VLVLEAYEHAKK 246
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 152 bits (384), Expect = 4e-42
Identities = 45/252 (17%), Positives = 91/252 (36%), Gaps = 20/252 (7%)
Query: 35 ICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFD 94
+ +TG+ + P V + L IS D + K + K
Sbjct: 4 VVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDH--------FDTSAYATKFAGLVKDF 55
Query: 95 AAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF 154
+ K+ MD + + +A+ D+G+ ++ G IG+
Sbjct: 56 NCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEE 115
Query: 155 YEKL-------QINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKS 207
+I+ F + M+A ++ G+ GPS ++ +A +S ++ + HA +
Sbjct: 116 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARI 175
Query: 208 IRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRSEAVC 262
I G + GG P F LS P + +D+ +G+ +
Sbjct: 176 IAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAG 235
Query: 263 IMYLQKSKDAKR 274
++ L++ + AK+
Sbjct: 236 MLVLEEYEHAKK 247
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 145 bits (365), Expect = 1e-39
Identities = 50/252 (19%), Positives = 96/252 (38%), Gaps = 20/252 (7%)
Query: 35 ICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFD 94
+ +TG+ + P ++D+ + L + I R + + K
Sbjct: 4 VVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFD--------ASDQACRFGGEVKDF 55
Query: 95 AAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF 154
A + K+A MD C + + +A+ DA + L + GV IG +
Sbjct: 56 DATQFLDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLED 115
Query: 155 YEKL-------QINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKS 207
+ + + + F I M + + LG GP+ +AC++ A+ A++
Sbjct: 116 QQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRL 175
Query: 208 IRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS-----PDGRCKSFDEAANGYCRSEAVC 262
+++G+ A GG + P FA LS P + FD+ +G+ E
Sbjct: 176 VQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 235
Query: 263 IMYLQKSKDAKR 274
I+ L++ + A
Sbjct: 236 ILILEELESALA 247
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 145 bits (365), Expect = 2e-39
Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 19/251 (7%)
Query: 35 ICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFD 94
+ +TG P +F L I + + + ++
Sbjct: 11 VVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFV- 69
Query: 95 AAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF 154
K + D L EAV A ++ ++L + GV + + ++
Sbjct: 70 -------KKDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIED 122
Query: 155 YEKLQ-------INGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKS 207
+ + M + V+ G NG ++++ACSSS A+ A++S
Sbjct: 123 QVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRS 182
Query: 208 IRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS----PDGRCKSFDEAANGYCRSEAVCI 263
I+ G + VGG + P+ F L LS P FD+ NG+ E +
Sbjct: 183 IKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVMGEGSGM 242
Query: 264 MYLQKSKDAKR 274
+ L+ + A++
Sbjct: 243 LVLESLEHAEK 253
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 114 bits (285), Expect = 8e-29
Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 23/266 (8%)
Query: 37 ITGIAGVFPDSTDVRDFGEKLNNKVDLISD-DDRRWKLGKEHPEIPQRTGKLY------- 88
+TG+ V P V +L + I K+ E T
Sbjct: 5 VTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAF 64
Query: 89 -----EVNKFDAAFFGVHFKQAHTMDPMCRI----ILEKTYEAVIDAGINPKSLRGSKTG 139
+FD A + A+ + + + + + +
Sbjct: 65 VPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGI 124
Query: 140 VFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLY 199
I ++ +++ F I M + VS G GP++ +AC++ +
Sbjct: 125 GSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAH 184
Query: 200 ALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFDEAAN 253
++ A + I+ G + GG + F+R LS P + FD +
Sbjct: 185 SIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRD 244
Query: 254 GYCRSEAVCIMYLQKSKDAKRVYARV 279
G+ E ++ L++ + AKR A++
Sbjct: 245 GFVIGEGSGVIVLEEYEHAKRRGAKI 270
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 104 bits (259), Expect = 2e-25
Identities = 35/252 (13%), Positives = 87/252 (34%), Gaps = 13/252 (5%)
Query: 37 ITGIAGVFPDSTDVRDFGEKLNNKVDLIS----DDDRRWKLGKEHPEIPQRTGKLYEVNK 92
ITG+ V + ++ L I+ D + TG +
Sbjct: 6 ITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLIDRKVV 65
Query: 93 FDAAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT 152
+ ++ + + + Y+ G+ S GS GA +
Sbjct: 66 RFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRG 125
Query: 153 WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGH 212
+ + +T + ++ ++ ++G +Y++ SAC++S + + +A + I+ G
Sbjct: 126 L----KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGK 181
Query: 213 CNAAFVGGCNLCLHPYVSLQFA-----RLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQ 267
+ F GG A +P+ +++D +G+ + ++ ++
Sbjct: 182 QDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVE 241
Query: 268 KSKDAKRVYARV 279
+ + A A +
Sbjct: 242 ELEHALARGAHI 253
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 101 bits (253), Expect = 3e-25
Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 7/182 (3%)
Query: 241 PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKRVYAR---VVHAKTNCDGYKEQGITYP 297
P+ + FD +G+ +E + L+ A AR +
Sbjct: 3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKA 62
Query: 298 SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGS 357
G + E D ++ +I AHG+GT+ D E A + + S
Sbjct: 63 DGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGE-HARRTPVSS 121
Query: 358 VKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPSFHNGKIQLESRPLDAE 417
+KS +GHS A G + +LA+E+G++PP N ++ P + LE+R
Sbjct: 122 IKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSD---PECDLDYVPLEARERKLR 178
Query: 418 YV 419
V
Sbjct: 179 SV 180
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 102 bits (254), Expect = 3e-25
Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 21/220 (9%)
Query: 35 ICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFD 94
+ ITG+ P R F E L + FD
Sbjct: 3 VVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQV--------AAEADFD 54
Query: 95 AAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF 154
G ++ MD + + EA +G++P +L ++ GV +G+ + +
Sbjct: 55 PVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLER 114
Query: 155 YEKLQ-------------INGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYAL 201
L ++ +++ V++ +G GP V + C+S L ++
Sbjct: 115 EYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSV 174
Query: 202 EHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP 241
+A ++I +G + F G + + P V F + +
Sbjct: 175 GNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTA 214
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 94.5 bits (234), Expect = 5e-23
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333
++YA +V + D Y +GA + + + ++ + ++ AHGT T G
Sbjct: 1 KIYAELVGFGMSSDAYH-MTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAG 59
Query: 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFK 393
D E QA++ +F + L+ S KS GH A+G ILA+ + +PP IN
Sbjct: 60 DKAEAQAVKTIFGEAASRV-LVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLD 118
Query: 394 SPRKDIPSFHN 404
+P +
Sbjct: 119 NPDEGCDLDFV 129
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 93.3 bits (231), Expect = 1e-22
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 5/146 (3%)
Query: 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333
++Y +V CD Y P G R + + + P+ +++I AHGT T
Sbjct: 1 KIYGEMVGYAMTCDAYH-ITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPAN 59
Query: 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFK 393
D E +A++ + + S KS GH SG ++A+ +PP IN +
Sbjct: 60 DVTETRAIKQALGN-HAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLE 118
Query: 394 SPRKDIPSFHNGKIQLESRPLDAEYV 419
+P + + +SR L +
Sbjct: 119 NPDPECDLDYV---PGQSRALIVDVA 141
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 90.2 bits (223), Expect = 1e-21
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 276 YARVVHAKTNCDGYKEQGITYPS--GALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333
YA + + D + IT P G + + + P + ++ AH T T +G
Sbjct: 1 YAELCGYGMSGDAH---HITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIG 57
Query: 334 DPEEVQALENVF-CPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINF 392
D E +A++ VF + L S K GH A+G ILA+ +G+ P +N
Sbjct: 58 DAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNV 117
Query: 393 KSPRKDIP 400
K+P
Sbjct: 118 KNPDPIFD 125
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 89.8 bits (222), Expect = 2e-21
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVG 333
R+YA +V + D + +P G + + + P+ + +I AHGT T VG
Sbjct: 1 RIYAELVGFGRSADAHH-ITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVG 59
Query: 334 DPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFK 393
D EV A++ VF L++ S KS IGH A+G + A+ +G+IPP IN +
Sbjct: 60 DRAEVLAIKRVFGD-HAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLE 118
Query: 394 SPRKDIPSFH 403
P ++
Sbjct: 119 DPDPELDLDF 128
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 85.9 bits (211), Expect = 1e-19
Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 2/206 (0%)
Query: 35 ICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFD 94
+ ITG+ V P+ + + + + + R + + + + + + +
Sbjct: 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTR-FDVSRYPATLAGQIDDFHAPDHIP 60
Query: 95 AAFFGVHFKQAHTMDPMCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF 154
L+ + + E K W
Sbjct: 61 GRLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWS 120
Query: 155 YEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCN 214
++ + A+ ++S G+ GPS + + + L AL HA ++IR G
Sbjct: 121 EGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TP 179
Query: 215 AAFVGGCNLCLHPYVSLQFARLGVLS 240
GG + L P+ + G +S
Sbjct: 180 LVVSGGVDSALDPWGWVSQIASGRIS 205
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 81.4 bits (200), Expect = 1e-18
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 276 YARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDP 335
YA +V DG + PSG R ++ + ++ +HGT T VGD
Sbjct: 1 YAEIVGYGATSDGA---DMVAPSGEGAVRCMKMAMHGVDTPID---YLNSHGTSTPVGDV 54
Query: 336 EEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395
+E+ A+ VF I + K+ GHS A+GV +L +E+G I P+IN +
Sbjct: 55 KELAAIREVFGD---KSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEEL 111
Query: 396 RKDIPSFHNGKIQLESRPLDAEYV 419
+ + I E+ + V
Sbjct: 112 DEQAAGLN---IVTETTDRELTTV 132
|
| >d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: FabD-like domain: Catalytic domain of malonyl-CoA ACP transacylase FabD species: Streptomyces coelicolor A3(2) [TaxId: 100226]
Score = 80.3 bits (197), Expect = 3e-17
Identities = 24/111 (21%), Positives = 38/111 (34%), Gaps = 12/111 (10%)
Query: 464 FVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSF 523
V G G+Q G T+ + +P A + + G+D+ T + + +
Sbjct: 5 LVAPGQGAQTPGFLTDWLALPGAADRVAAWSDAI---GLDLAHFGTKADADEIRDTSVAQ 61
Query: 524 VGIAAIQIGLVDILRA---------LNITPDHIIGHSVGELGCAYADGCFT 565
+ A I L TP + GHSVGE+ A G
Sbjct: 62 PLLVAAGILSAAALGTQTSVADATGPGFTPGAVAGHSVGEITAAVFAGVLD 112
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 75.4 bits (184), Expect = 5e-16
Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 4/161 (2%)
Query: 241 PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAKRVYARVVHAK-TNCDGYKEQGITYPSG 299
PD FDE A GY E I+ L+ S A+ + + C +
Sbjct: 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRP 61
Query: 300 ALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVK 359
A +R + ++ P+++ + A G G D E +A+ VF K
Sbjct: 62 AGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPV---TVPK 118
Query: 360 SNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400
+ G G V ++++ G+I P S ++
Sbjct: 119 TTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYG 159
|
| >d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: FabD-like domain: Catalytic domain of malonyl-CoA ACP transacylase FabD species: Escherichia coli [TaxId: 562]
Score = 73.7 bits (180), Expect = 4e-15
Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 5/116 (4%)
Query: 464 FVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNS 522
FVF G GSQ GM ++ PI T + A L G D+ + + + +
Sbjct: 4 FVFPGQGSQTVGMLADMAASYPIVEETFAEASAAL---GYDLWALTQQGPAEELNKTWQT 60
Query: 523 FVGIAAIQIGLVDILRAL-NITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRG 577
+ + L + + P + GHS+GE G + RG
Sbjct: 61 QPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRG 116
|
| >d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: FabD-like domain: Catalytic domain of malonyl-CoA ACP transacylase FabD species: Escherichia coli [TaxId: 562]
Score = 41.7 bits (97), Expect = 2e-04
Identities = 15/128 (11%), Positives = 41/128 (32%), Gaps = 7/128 (5%)
Query: 653 HAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLSTSNTEANWTTHLAK 712
K + P P ++ K + ++ + + +
Sbjct: 113 EMRGKFMQEAVPEVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNGDAIR 172
Query: 713 YSSAEYHTNNLLSPVLFEETSRHIQKNAIT--LEIAPHGLLQAILRRSLPKTVTNVSLTQ 770
+ L +PV + ++ ++ + E+ P +L + +R + T+T +L +
Sbjct: 173 ----DALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVD-TLTASALNE 227
Query: 771 RENANSVL 778
+ L
Sbjct: 228 PSAMAAAL 235
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 66.7 bits (162), Expect = 2e-13
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Query: 275 VYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGD 334
+ A VV CD Y +P G + ++ E E+ P+ +A++ AHGT T +
Sbjct: 2 ILAEVVGYGNTCDAYH-MTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANE 60
Query: 335 PEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKS 394
E A+ V G+ P + S KS GH A+G I AM + +P
Sbjct: 61 KGESGAIVAVL--GKEVP--VSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSE 116
Query: 395 PRKDIP 400
I
Sbjct: 117 VSDYIE 122
|
| >d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 62 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Probable ACP-binding domain of malonyl-CoA ACP transacylase family: Probable ACP-binding domain of malonyl-CoA ACP transacylase domain: Probable ACP-binding domain of malonyl-CoA ACP transacylase species: Streptomyces coelicolor A3(2) [TaxId: 100226]
Score = 46.7 bits (111), Expect = 1e-07
Identities = 7/58 (12%), Positives = 15/58 (25%), Gaps = 2/58 (3%)
Query: 588 GAMAAV-GLGYKDLRSRCP-PEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFAR 643
M+A+ G + + + A N +G E + +
Sbjct: 2 TGMSALLGGDPEVSVAHLERLGLTPANVNGAGQIVAAGTMEQLAALNEDKPEGVRKVV 59
|
| >d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} Length = 70 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Probable ACP-binding domain of malonyl-CoA ACP transacylase family: Probable ACP-binding domain of malonyl-CoA ACP transacylase domain: Probable ACP-binding domain of malonyl-CoA ACP transacylase species: Escherichia coli [TaxId: 562]
Score = 39.1 bits (91), Expect = 1e-04
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 588 GAMAAV-GLGYKDLRSRCP-----PEIEVACHNSPDSSTISGPEENVKKFVAELQADNI 640
GAMAA+ GL + C + NSP I+G +E V++ A +A
Sbjct: 3 GAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGA 61
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 883 | |||
| d1mlaa1 | 235 | Catalytic domain of malonyl-CoA ACP transacylase F | 100.0 | |
| d1nm2a1 | 253 | Catalytic domain of malonyl-CoA ACP transacylase F | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.98 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.98 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.95 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.95 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.94 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.94 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.94 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 99.93 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.24 | |
| d1mlaa2 | 70 | Probable ACP-binding domain of malonyl-CoA ACP tra | 99.2 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.04 | |
| d1nm2a2 | 62 | Probable ACP-binding domain of malonyl-CoA ACP tra | 99.04 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.01 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 98.91 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 98.84 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 98.79 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 98.77 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.68 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.56 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 98.51 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.44 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 98.28 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.28 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 98.2 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.19 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.14 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 85.97 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 84.07 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 82.14 |
| >d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: FabD-like domain: Catalytic domain of malonyl-CoA ACP transacylase FabD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.2e-46 Score=384.51 Aligned_cols=215 Identities=18% Similarity=0.294 Sum_probs=191.0
Q ss_pred CEEEEeCCCCchhhHhhHHHhc-ChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHH
Q psy1120 461 PLWFVFSGMGSQWDGMGTELME-IPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRA 539 (883)
Q Consensus 461 ~v~fvF~GQGsq~~gMg~~L~~-~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~ 539 (883)
+++|||||||+||+|||++||+ +|.||+.+++|++++ |+++.+.+...+...++++.++||+||++|++++++|++
T Consensus 1 q~AfvFpGQGsQ~~gMg~~L~~~~p~~r~~~~~~~~~l---~~~l~~~~~~~~~~~~~~t~~~qpai~~~~~al~~~l~~ 77 (235)
T d1mlaa1 1 QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAAL---GYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQ 77 (235)
T ss_dssp CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHH---TSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCChhhhHHHHHHHHHHCCHHHHHHHHHHHHHh---CCCHHHHHhcCcccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999996 899999999999999 899999988777777899999999999999999999998
Q ss_pred c-CCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEEcCCHHHHhhcCCCCeEEeeecCCCc
Q psy1120 540 L-NITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVACHNSPDS 618 (883)
Q Consensus 540 ~-Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av~~~~~~v~~~l~~~v~iA~~Nsp~~ 618 (883)
+ |++|++++|||+|||+|+|+||+||+||+++++..||++|++...
T Consensus 78 ~~g~~p~~v~GhSlGE~aAl~~aG~ls~e~~~~lv~~Rg~~m~~~~~--------------------------------- 124 (235)
T d1mlaa1 78 QGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVP--------------------------------- 124 (235)
T ss_dssp TTCCCCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHSC---------------------------------
T ss_pred hcCCCceeeeeccchHHHHHHHcCCcccccHHHHHHHHHHHHHHcCC---------------------------------
Confidence 6 999999999999999999999999999999999999999865321
Q ss_pred EEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCCCcceEe
Q psy1120 619 STISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPRSTKWLS 698 (883)
Q Consensus 619 ~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~S 698 (883)
..||||++| + ++.+ +|++.+. .+. .+.|++|++|
T Consensus 125 ------------------------------~~pfHs~~m---~--~~~~----~~~~~l~-----~v~--~~~p~~pviS 158 (235)
T d1mlaa1 125 ------------------------------EVPSHCALM---K--PAAD----KLAVELA-----KIT--FNAPTVPVVN 158 (235)
T ss_dssp ------------------------------TSCTTSGGG---H--HHHH----HHHHHHH-----TSC--CCCCSSCBBC
T ss_pred ------------------------------CCcchhHHh---h--hhHH----HHHHHHh-----cCC--CCCCcceEEe
Confidence 348999999 7 6666 8888888 444 4789999999
Q ss_pred cccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcCC
Q psy1120 699 TSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLPK 761 (883)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~~ 761 (883)
++++..... .+ ..++||++|+++||+|.++|+.+.+.+ +|||||||++|+++++++++.
T Consensus 159 ~~tg~~~~~---~~-~~~~~l~~ql~~pV~f~~~i~~l~~~g~~~fiEiGP~~~Lt~l~~~i~~~ 219 (235)
T d1mlaa1 159 NVDVKCETN---GD-AIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDT 219 (235)
T ss_dssp TTTCCBCCS---HH-HHHHHHHHHHHSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHCTT
T ss_pred CCCCCCCCC---HH-HHHHHHHHhccCCccHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCC
Confidence 999876532 11 247999999999999999999999875 699999999999999999864
|
| >d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: FabD-like domain: Catalytic domain of malonyl-CoA ACP transacylase FabD species: Streptomyces coelicolor A3(2) [TaxId: 100226]
Probab=100.00 E-value=2.1e-43 Score=369.80 Aligned_cols=238 Identities=20% Similarity=0.287 Sum_probs=200.3
Q ss_pred EEEEeCCCCchhhHhhHHHhcChHHHHHHHHHHHHhccCCCChHHHhccCCCccchhhhhHHHHHHHHHHHHHHHHHH--
Q psy1120 462 LWFVFSGMGSQWDGMGTELMEIPIFAATIEKLQAVLKPKGVDVKRIITDTNPKMFDNILNSFVGIAAIQIGLVDILRA-- 539 (883)
Q Consensus 462 v~fvF~GQGsq~~gMg~~L~~~p~fr~~~~~~~~~l~~~g~~l~~~l~~~~~~~l~~~~~~qp~i~a~qial~~ll~~-- 539 (883)
++|+|||||+||+|||++|+++|.|++.++++++++ |+++.+++...+.+.++++.++||++++++++++++|++
T Consensus 3 iafvFpGQGsQ~~gM~~~l~~~~~~~~~~~~~~~~l---g~~l~~~~~~~~~~~l~~t~~~Qp~~~~~~~a~~~~l~~~~ 79 (253)
T d1nm2a1 3 LVLVAPGQGAQTPGFLTDWLALPGAADRVAAWSDAI---GLDLAHFGTKADADEIRDTSVAQPLLVAAGILSAAALGTQT 79 (253)
T ss_dssp EEEEECCTTCCCTTTTHHHHTSTTHHHHHHHHHHHH---TSCHHHHHHTCCHHHHTCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred EEEEECccHHhHHHHHHHHHhCHHHHHHHHHHHHHh---CCCHHHHhcCCChhhhhhhhhcchHHHHHHHHHHHHHHHhc
Confidence 799999999999999999999999999999999999 999999988877777899999999999999999999976
Q ss_pred -------cCCCccEEeecCHHHHHHHHHhccCChHhhHHHHHHHHHhhcccccccccEEEEcCCHHHHhhcCCCCeEEee
Q psy1120 540 -------LNITPDHIIGHSVGELGCAYADGCFTVEQTILAAYYRGLASVETEFIRGAMAAVGLGYKDLRSRCPPEIEVAC 612 (883)
Q Consensus 540 -------~Gi~P~~v~GHSlGE~aAa~~aG~lsleda~~lv~~Rg~~~~~~~~~~G~M~av~~~~~~v~~~l~~~v~iA~ 612 (883)
+|++|++++|||+|||+|+|+||+|+++|+++++..|+..+.....
T Consensus 80 ~~~~~~~~Gv~P~~v~GHSlGE~aAl~~aG~l~~~d~~~lv~~r~~~~~~~~~--------------------------- 132 (253)
T d1nm2a1 80 SVADATGPGFTPGAVAGHSVGEITAAVFAGVLDDTAALSLVRRRGLAMAEAAA--------------------------- 132 (253)
T ss_dssp --------CCCCSEEEESTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH---------------------------
T ss_pred chhhhcccccccceeecCCCCHHHHHHHHcCCChHhhhhhhhhhhhhhccccc---------------------------
Confidence 5999999999999999999999999999999999999987754210
Q ss_pred ecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcCCCCCccccchhhcccCCCCCCcchHHHHHHHHhhhccccccCCCCC
Q psy1120 613 HNSPDSSTISGPEENVKKFVAELQADNIFARTINVANTEKHAPLKQCRAQRPPAPWLTDDIRACMKARDRAHVKFQPKPR 692 (883)
Q Consensus 613 ~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHs~~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 692 (883)
..+ ..||||++| + ++.+ ++.+.+. .+ .+++|
T Consensus 133 --------------------------------~~~-sgafHs~~m---~--~~~~----~~~~~l~-----~~--~~~~p 163 (253)
T d1nm2a1 133 --------------------------------VTV-AGAFHTRHM---A--PAVD----KLAEAAK-----AL--TPADP 163 (253)
T ss_dssp --------------------------------TSC-SSCTTSGGG---H--HHHH----HHHHHHT-----TC--CCCCC
T ss_pred --------------------------------ccC-CCCCCChhH---h--hhHH----HHHHHHH-----hh--hcccc
Confidence 112 458999999 7 6666 7888777 44 45789
Q ss_pred CcceEecccCCccccccccccCCHHHHHHHhcCCccHHHHHHHhhcCC--EEEEECCCccchHHHHhhcCCCccEEeecc
Q psy1120 693 STKWLSTSNTEANWTTHLAKYSSAEYHTNNLLSPVLFEETSRHIQKNA--ITLEIAPHGLLQAILRRSLPKTVTNVSLTQ 770 (883)
Q Consensus 693 ~~~~~S~~~~~~~~~~~~~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~iEiGP~~~L~~~i~~~l~~~~~~~~~~~ 770 (883)
.+|++|++++....+ .. ..++||.+|+++||+|.++|+.+.+.+ +|||||||++|+++++++++.. ..++..
T Consensus 164 ~~p~~S~~~g~~~~~--~~--~~~~~l~~ql~~pV~f~~~i~~l~~~gv~~fvEiGP~~~Ls~l~k~~~~~~-~~~sv~- 237 (253)
T d1nm2a1 164 KVTYVSNKDGRAVAS--GT--EVLDRLVGQVANPVRWDLCMETFKELGVTAIIEVCPGGTLTGLAKRALPGV-KTLALK- 237 (253)
T ss_dssp SSEEBCTTTSCBCCC--HH--HHHHHHHHHTTSCEEHHHHHHHHHHTTCCEEEECSSCSHHHHHHHHHSTTC-EEEECC-
T ss_pred ccccccccccchhhh--cc--hhHhhhhhhhcccccHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCCC-CeeecC-
Confidence 999999999987532 11 247999999999999999999999875 6999999999999999998532 233322
Q ss_pred CCCcchHHHHHHHHHH
Q psy1120 771 RENANSVLYLLQALGK 786 (883)
Q Consensus 771 ~~~~~~~~~ll~~l~~ 786 (883)
..++.+.+++.+++
T Consensus 238 --~~~~l~~~~~~~a~ 251 (253)
T d1nm2a1 238 --TPDDLDAARELVAE 251 (253)
T ss_dssp --SGGGHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHh
Confidence 23567777776654
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1e-41 Score=358.40 Aligned_cols=233 Identities=21% Similarity=0.331 Sum_probs=201.5
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|||||||+++|+|.++++||++|.+|++++.+.+ +|+... .+.+.+ ...++++..+ +++++.+.|||++
T Consensus 2 ~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~-~~~~~~----~~~~~~---~~~~~~~~~~-~~~~~~~~~d~~~ 72 (249)
T d1j3na1 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT-RFDASA----LPVRIA---AEVDVDPGAY-LDRKELRRLDRFV 72 (249)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC-SSCCTT----SSCCEE---ECCCCCGGGT-SCHHHHTTSCHHH
T ss_pred CcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCC-cccccc----CCcccc---cccccccccc-ccHHHHhhCCHHH
Confidence 479999999999999999999999999999998754 444331 222222 1233444444 7999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHhhCCCC
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYWLGVNG 185 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G 185 (883)
+++++++++||+|||+++++++..|+|||+|++.++...... .....++++...+...+.++++|++.|||+|
T Consensus 73 ~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~G 152 (249)
T d1j3na1 73 QYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTG 152 (249)
T ss_dssp HHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCC
Confidence 999999999999999999999999999999998887543221 2234567778888999999999999999999
Q ss_pred ceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC-----CCCCCCcccCCCCcccccc
Q psy1120 186 PSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP-----DGRCKSFDEAANGYCRSEA 260 (883)
Q Consensus 186 ps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~~~G~~~gEG 260 (883)
|+++|+++|+||+.||++|+++|++|+||+|||||+|...+|..+..|...++|+. +++|||||.++||+++|||
T Consensus 153 p~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~~dG~v~gEG 232 (249)
T d1j3na1 153 PSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEG 232 (249)
T ss_dssp CBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCE
T ss_pred CccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCCCCCEeeEeE
Confidence 99999999999999999999999999999999999999999999999999999984 5679999999999999999
Q ss_pred eEEEEEcccccccc
Q psy1120 261 VCIMYLQKSKDAKR 274 (883)
Q Consensus 261 a~~vvL~~~~~A~~ 274 (883)
|+++|||++++|++
T Consensus 233 a~~lvLe~~~~A~~ 246 (249)
T d1j3na1 233 AGVLVLEAYEHAKK 246 (249)
T ss_dssp EEEEEEEEHHHHHH
T ss_pred EEEEEEccHHHHHH
Confidence 99999999999864
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-41 Score=355.86 Aligned_cols=235 Identities=19% Similarity=0.249 Sum_probs=202.5
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
+++|||||||+++|+|.++++||++|.+|++++++.+ +|+... ++.+.+ ..++.|+... .+++++.+.|||+
T Consensus 1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~-~~~~~~----~~~~~~--~~v~~~~~~~-~~~~~~~~~~d~~ 72 (250)
T d2gfva1 1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID-HFDTSA----YATKFA--GLVKDFNCED-IISRKEQRKMDAF 72 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC-SSCCTT----CSCCEE--ECCTTCCCTT-TSCHHHHTTSCHH
T ss_pred CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCC-cccccc----cCCccc--eecccchhhh-hhhhHHHhhcCHH
Confidence 3689999999999999999999999999999998754 444432 122211 2345555543 3889999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhh-------hhhhhccCCccccccchhhHHHHHHHhhCCC
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTW-------FYEKLQINGFGITGCSRAMLANRVSYWLGVN 184 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~ 184 (883)
+++++.++++||+|||+..++++..++||++|++.++..... ......++++.+++.+.+.++++|++.||++
T Consensus 73 ~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 152 (250)
T d2gfva1 73 IQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLR 152 (250)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCC
Confidence 999999999999999999999898999999999877653321 1233456777888899999999999999999
Q ss_pred CceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC-----CCCCCCcccCCCCccccc
Q psy1120 185 GPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP-----DGRCKSFDEAANGYCRSE 259 (883)
Q Consensus 185 Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~~~G~~~gE 259 (883)
||+++|+++|+||+.||++|+++|++|+||++||||++..++|..+..|..+++||. ++.|||||.++||+++||
T Consensus 153 Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gE 232 (250)
T d2gfva1 153 GPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGD 232 (250)
T ss_dssp SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBC
T ss_pred CCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCCCCCEeeee
Confidence 999999999999999999999999999999999999999999999999999999985 467999999999999999
Q ss_pred ceEEEEEcccccccc
Q psy1120 260 AVCIMYLQKSKDAKR 274 (883)
Q Consensus 260 Ga~~vvL~~~~~A~~ 274 (883)
|++++|||++++|++
T Consensus 233 Gaa~lVLE~~~~A~~ 247 (250)
T d2gfva1 233 GAGMLVLEEYEHAKK 247 (250)
T ss_dssp EEEEEEEEEHHHHHH
T ss_pred EEEEEEECcHHHHHH
Confidence 999999999999863
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=1.3e-40 Score=350.66 Aligned_cols=235 Identities=22% Similarity=0.292 Sum_probs=202.0
Q ss_pred CCcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChH
Q psy1120 32 GDEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPM 111 (883)
Q Consensus 32 ~~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~ 111 (883)
+++|||||||+++|+|.++++||++|.+|++++++.+ +|+...+ .....| .+. ++...+.+++++.+.|||+
T Consensus 1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~-~~~~~~~---~~~~~g---~~~-~~~~~~~~~~~~~~~~d~~ 72 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPIT-RFDASDQ---ACRFGG---EVK-DFDATQFLDRKEAKRMDRF 72 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC-SSCCTTS---SCCEEE---CCC-SCCGGGTSCHHHHHTSCHH
T ss_pred CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCC-ccccccc---cccccc---eee-ecccccccchhhhhhcCcH
Confidence 4789999999999999999999999999999998654 5554321 111122 233 3444566999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhh-------hhhhccCCccccccchhhHHHHHHHhhCCC
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWF-------YEKLQINGFGITGCSRAMLANRVSYWLGVN 184 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~is~~~~l~ 184 (883)
++++++++++||+|||+.++.+...++||++|++.+....... ......+++.......+.+++++++.||++
T Consensus 73 ~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 152 (250)
T d1e5ma1 73 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK 152 (250)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCC
Confidence 9999999999999999999999999999999998776543221 123355667777888899999999999999
Q ss_pred CceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC-----CCCCCCcccCCCCccccc
Q psy1120 185 GPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP-----DGRCKSFDEAANGYCRSE 259 (883)
Q Consensus 185 Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~-----~g~~~pfd~~~~G~~~gE 259 (883)
||+++|++||+||+.||++|+++|++|+||++||||++..++|..+..|.++++|+. +++|||||.++|||++||
T Consensus 153 Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~~dG~~~gE 232 (250)
T d1e5ma1 153 GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGE 232 (250)
T ss_dssp SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBC
T ss_pred CCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCCCCCCEeeEe
Confidence 999999999999999999999999999999999999999999999999999999984 578999999999999999
Q ss_pred ceEEEEEcccccccc
Q psy1120 260 AVCIMYLQKSKDAKR 274 (883)
Q Consensus 260 Ga~~vvL~~~~~A~~ 274 (883)
|++++|||++++|++
T Consensus 233 Ga~~~vLe~l~~A~~ 247 (250)
T d1e5ma1 233 GSGILILEELESALA 247 (250)
T ss_dssp EEEEEEEEEHHHHHH
T ss_pred eEEEEEEeeHHHHHH
Confidence 999999999999863
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.5e-36 Score=317.09 Aligned_cols=232 Identities=17% Similarity=0.254 Sum_probs=189.2
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|||||||+++|+|.++++||++|++|++++++.++++... .+...+ .++. ++...+ +..++.+.+|+..
T Consensus 2 ~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~~~~-----~~~~~~--~~~~-~~~~~~-~~~~~~~~~~~~~ 72 (253)
T d2vbaa1 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSG-----MRSHVW--GNVK-LDTTGL-IDRKVVRFMSDAS 72 (253)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTT-----CSCCEE--ECCC-CCCTTS-SCHHHHTTCCHHH
T ss_pred CcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCcccccc-----Cccccc--cccc-cccccc-ccchhhccchhhh
Confidence 479999999999999999999999999999998765433322 111111 1222 222222 6888899999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCC-CCCceEEEEccCCCchhhhhh--------hhhhccCCccccccchhhHHHHHHHhhCC
Q psy1120 113 RIILEKTYEAVIDAGINPKSL-RGSKTGVFIGACFSESEKTWF--------YEKLQINGFGITGCSRAMLANRVSYWLGV 183 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~-~~~~~gv~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~is~~~~l 183 (883)
++.+.++.+|++++|+..+.. ...++|+++|+..+....... ......+++.+.+...+.++++||+.||+
T Consensus 73 ~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~ 152 (253)
T d2vbaa1 73 IYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKI 152 (253)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTC
T ss_pred hhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCc
Confidence 999999999999999975443 456899999988775433211 12334567778888899999999999999
Q ss_pred CCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCC------CCCCCCCcccCCCCccc
Q psy1120 184 NGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLS------PDGRCKSFDEAANGYCR 257 (883)
Q Consensus 184 ~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls------~~g~~~pfd~~~~G~~~ 257 (883)
+||+++|+++|+||+.||++|+++|++|+||++||||++.+. +.....|..++.++ |++.|||||.++|||++
T Consensus 153 ~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~-~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~~G~v~ 231 (253)
T d2vbaa1 153 HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELC-WEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVI 231 (253)
T ss_dssp CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-HHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCB
T ss_pred ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhh-cchhhhHHHHHHHhcCCCCCCCCCCCCCCCCCCCEee
Confidence 999999999999999999999999999999999999999854 44567788888876 47899999999999999
Q ss_pred ccceEEEEEcccccccc
Q psy1120 258 SEAVCIMYLQKSKDAKR 274 (883)
Q Consensus 258 gEGa~~vvL~~~~~A~~ 274 (883)
|||++++|||++++|++
T Consensus 232 gEGa~~lvLe~le~A~~ 248 (253)
T d2vbaa1 232 AGGGGMVVVEELEHALA 248 (253)
T ss_dssp BCEEEEEEEEEHHHHHH
T ss_pred eeEEEEEEEccHHHHHH
Confidence 99999999999999974
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.3e-36 Score=305.91 Aligned_cols=158 Identities=25% Similarity=0.460 Sum_probs=148.7
Q ss_pred CCCCCCCcccCCCCcccccceEEEEEccccccc----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy1120 241 PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAK----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVD 316 (883)
Q Consensus 241 ~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~A~----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~ 316 (883)
|+++|||||.++|||++|||++++|||++++|+ +||++|.|+++++|+.+ .+...|++..+.++++++|++++++
T Consensus 3 P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~-~~~~~~~~~~~~~~~~~al~~a~i~ 81 (205)
T d1tqya2 3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYH-MTGLKADGREMAETIRVALDESRTD 81 (205)
T ss_dssp GGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSC-SSCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccc-cCcccccccccchhhhhHHhhhcCC
Confidence 689999999999999999999999999999986 59999999999999975 4566789999999999999999999
Q ss_pred CCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCC
Q psy1120 317 PKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPR 396 (883)
Q Consensus 317 ~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~ 396 (883)
|+||+|||+|||||+++|++|+.+|.++|+. ...+++|+|+|+++||+++|||+++++|++++|++++|||++||++||
T Consensus 82 ~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~-~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~ 160 (205)
T d1tqya2 82 ATDIDYINAHGSGTRQNDRHETAAYKRALGE-HARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSD 160 (205)
T ss_dssp GGGCCEEECCCCCCHHHHHHHHHHHHHHTGG-GGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBB
T ss_pred ccceeeeeccccccccCchhHHHHHHHhhcc-ccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCCC
Confidence 9999999999999999999999999999974 234688999999999999999999999999999999999999999999
Q ss_pred CCCC
Q psy1120 397 KDIP 400 (883)
Q Consensus 397 ~~~~ 400 (883)
|+++
T Consensus 161 p~~~ 164 (205)
T d1tqya2 161 PECD 164 (205)
T ss_dssp TTBC
T ss_pred CCCC
Confidence 9987
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=3.8e-35 Score=312.10 Aligned_cols=238 Identities=20% Similarity=0.252 Sum_probs=186.7
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCC-CcccccCCCCC--------CCCCC-ccccc---cCCCCCcccCC
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDD-DRRWKLGKEHP--------EIPQR-TGKLY---EVNKFDAAFFG 99 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~-~~~~~~~~~~~--------~~~~~-~g~~~---~~~~fD~~~f~ 99 (883)
++||||||||++|+|.++++||++|++|+++|++. ..+|....++. ..+.+ .++++ ....||..++
T Consensus 1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (270)
T d2ix4a1 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALW- 79 (270)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHH-
T ss_pred CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHh-
Confidence 47999999999999999999999999999999985 46676543211 01111 12221 2233444433
Q ss_pred CChhhhhcCChHHHHHHHHHHHHHHHCCCCCCC-CCCCceEEEEccCCCchhhh-------hhhhhhccCCccccccchh
Q psy1120 100 VHFKQAHTMDPMCRIILEKTYEAVIDAGINPKS-LRGSKTGVFIGACFSESEKT-------WFYEKLQINGFGITGCSRA 171 (883)
Q Consensus 100 i~~~~~~~~dp~~rl~l~aa~eALedAG~~~~~-~~~~~~gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 171 (883)
+....+++....++.+..+|++|++....+ ....++++.++......... .........++...+...+
T Consensus 80 ---~~~~~~~~~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (270)
T d2ix4a1 80 ---LNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVN 156 (270)
T ss_dssp ---SCSTTCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTT
T ss_pred ---hhhhhhhhhHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccc
Confidence 234456777888888999999999975433 22345666665554432221 1122345677788899999
Q ss_pred hHHHHHHHhhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC------CCCC
Q psy1120 172 MLANRVSYWLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP------DGRC 245 (883)
Q Consensus 172 ~~a~~is~~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~------~g~~ 245 (883)
+++++|++.||++||+++|+++||||+.||++|+++|++|+||+|||||++..+.|..+..|...++|+. +++|
T Consensus 157 ~~a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~ 236 (270)
T d2ix4a1 157 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEAS 236 (270)
T ss_dssp HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSC
T ss_pred hhHHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974 5789
Q ss_pred CCcccCCCCcccccceEEEEEcccccccc
Q psy1120 246 KSFDEAANGYCRSEAVCIMYLQKSKDAKR 274 (883)
Q Consensus 246 ~pfd~~~~G~~~gEGa~~vvL~~~~~A~~ 274 (883)
||||.++|||++|||++++|||++++|++
T Consensus 237 rPFD~~a~G~v~gEGaa~~vLe~l~~A~~ 265 (270)
T d2ix4a1 237 RPFDCDRDGFVIGEGSGVIVLEEYEHAKR 265 (270)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHH
T ss_pred CCCCCCCCCEeeEeeEEEEEEeeHHHHHH
Confidence 99999999999999999999999999974
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=4.2e-35 Score=293.47 Aligned_cols=153 Identities=22% Similarity=0.335 Sum_probs=140.5
Q ss_pred CCCCCCCcccCCCCcccccceEEEEEccccccc-----ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q psy1120 241 PDGRCKSFDEAANGYCRSEAVCIMYLQKSKDAK-----RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEV 315 (883)
Q Consensus 241 ~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~~A~-----~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl 315 (883)
|++.|||||.++|||++|||++++|||++++|+ +||++|.|+++++|+.+. . +++.+++++|+++|+++++
T Consensus 2 p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~--~--~~~~g~~~~i~~aL~~a~i 77 (194)
T d1tqyb2 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPG--S--GRPAGLERAIRLALNDAGT 77 (194)
T ss_dssp GGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTT--C--CCCCSHHHHHHHHHHHHTC
T ss_pred CCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeeccccccccccc--c--cchhhhhhhhhhhcccccc
Confidence 678999999999999999999999999998874 499999999999998542 2 3344688999999999999
Q ss_pred CCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCC
Q psy1120 316 DPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSP 395 (883)
Q Consensus 316 ~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~ 395 (883)
+|+||+|||+|||||+.+|++|++||.++|++ ..++|+|+|+++||+++|||+++++|++++|++++|||++|+++|
T Consensus 78 ~~~di~~v~ahgtGt~~~D~~E~~al~~~f~~---~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~ 154 (194)
T d1tqyb2 78 GPEDVDVVFADGAGVPELDAAEARAIGRVFGR---EGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSV 154 (194)
T ss_dssp CGGGCCEEECCCCCSHHHHHHHHHHHHHHHCT---TCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCC
T ss_pred cccceeeeeccccCcccccHHHhhhhhhhhhc---cccccccccccccccccccccceehhhhhhhhhceeccccCCCCC
Confidence 99999999999999999999999999999963 358899999999999999999999999999999999999999999
Q ss_pred CCCCC
Q psy1120 396 RKDIP 400 (883)
Q Consensus 396 ~~~~~ 400 (883)
||+++
T Consensus 155 ~~~~~ 159 (194)
T d1tqyb2 155 PREYG 159 (194)
T ss_dssp CGGGC
T ss_pred CcccC
Confidence 99876
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.98 E-value=3e-32 Score=279.64 Aligned_cols=202 Identities=19% Similarity=0.315 Sum_probs=173.3
Q ss_pred CcEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHH
Q psy1120 33 DEICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMC 112 (883)
Q Consensus 33 ~~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~ 112 (883)
++|||||||+++|+|.++++||++|.+|+++|++.+ +|+.+ +. .+.+.....||...+++++++++.|||.+
T Consensus 1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~-~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (216)
T d1tqya1 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRIS-FFDPS------PY-RSQVAAEADFDPVAEGFGPRELDRMDRAS 72 (216)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC-SSCCT------TS-SCCEEECCCCCHHHHTCCHHHHHHSCHHH
T ss_pred CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCC-ccCCC------cc-cccccccccccccccccChhhhcccCcch
Confidence 479999999999999999999999999999999754 23322 11 12333456688888899999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhh-------------hhhccCCccccccchhhHHHHHHH
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFY-------------EKLQINGFGITGCSRAMLANRVSY 179 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~a~~is~ 179 (883)
++++.++.|||+|||++++++.+.++|+++|.+.+........ +......+..++.+++++++++|+
T Consensus 73 ~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 152 (216)
T d1tqya1 73 QFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAW 152 (216)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHH
Confidence 9999999999999999999999999999999988765432211 112344566677788999999999
Q ss_pred hhCCCCceeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCC
Q psy1120 180 WLGVNGPSYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPD 242 (883)
Q Consensus 180 ~~~l~Gps~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~ 242 (883)
.||++||+++|+++|+||+.||++|+++|++|+||+|||||+|..++|..+..|++++.||..
T Consensus 153 ~~g~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~ 215 (216)
T d1tqya1 153 AVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215 (216)
T ss_dssp HHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred hcCccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999864
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.98 E-value=2.2e-32 Score=278.94 Aligned_cols=199 Identities=22% Similarity=0.291 Sum_probs=171.3
Q ss_pred cEEEEecceeccCCCCHHHHHHHHhcCCCcccCCCcccccCCCCCCCCCCccccccCCCCCcccCCCChhhhhcCChHHH
Q psy1120 34 EICITGIAGVFPDSTDVRDFGEKLNNKVDLISDDDRRWKLGKEHPEIPQRTGKLYEVNKFDAAFFGVHFKQAHTMDPMCR 113 (883)
Q Consensus 34 ~iaI~G~g~~~P~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fD~~~f~i~~~~~~~~dp~~r 113 (883)
.||||||||++|+|.++++||++|.+|++++++.+ +|+... .+.+ ....+..||+.++ +++++.+.|||+++
T Consensus 1 ~VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~-~~~~~~----~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 72 (208)
T d1tqyb1 1 SVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVT-RFDVSR----YPAT--LAGQIDDFHAPDH-IPGRLLPQTDPSTR 72 (208)
T ss_dssp CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECT-TTTGGG----SSCC--EEECCCSCCHHHH-SCTTTGGGCCHHHH
T ss_pred CEEEEcceeECCCcCCHHHHHHHHHcCCCceecCc-ccCchh----cccc--ccccccccccccc-CChhHhhccccccc
Confidence 38999999999999999999999999999998754 444331 1111 1124566777666 89999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhh-------hhhhhhccCCccccccchhhHHHHHHHhhCCCCc
Q psy1120 114 IILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKT-------WFYEKLQINGFGITGCSRAMLANRVSYWLGVNGP 186 (883)
Q Consensus 114 l~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gp 186 (883)
+++.++.|||+|||+++++++..++|+++|++.+..... ........+++...+...++.+++|++.||++||
T Consensus 73 ~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp 152 (208)
T d1tqyb1 73 LALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGP 152 (208)
T ss_dssp HHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSS
T ss_pred cccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccce
Confidence 999999999999999999999999999999988765332 1223446777888899999999999999999999
Q ss_pred eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCC
Q psy1120 187 SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSP 241 (883)
Q Consensus 187 s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~ 241 (883)
+++|++||+||+.||+.|+++|++| ||+|||||+|..++|..+..|.++++||.
T Consensus 153 ~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 153 SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred eeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999 99999999999999999999999999984
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.95 E-value=1.9e-29 Score=244.25 Aligned_cols=125 Identities=25% Similarity=0.451 Sum_probs=118.4
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCe
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPL 353 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~ 353 (883)
||||+|+|+++++||++ .+.+.|++.+|.++|++||++||++|+||+|||+|||||+.+|++|+.||.++|++ +..++
T Consensus 1 rIya~i~G~~~~~Dg~~-~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~-~~~~~ 78 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYH-ITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGN-HAYNI 78 (161)
T ss_dssp CCCEEEEEEEEEECCSC-SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGG-GGGGS
T ss_pred CEEEEEeeEEEeCCCCC-CCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhcccc-CCCcc
Confidence 69999999999999975 46678999999999999999999999999999999999999999999999999974 34579
Q ss_pred eecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 354 LIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 354 ~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+|+|+|+++||+++|||+++++|++++|+++.|||++|+++|||.++
T Consensus 79 ~v~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~ 125 (161)
T d1e5ma2 79 AVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECD 125 (161)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCC
T ss_pred eEEecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999987
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=3.7e-29 Score=242.61 Aligned_cols=126 Identities=27% Similarity=0.461 Sum_probs=117.8
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCe
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPL 353 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~ 353 (883)
||||+|+|+++++||.+ ...+.|++.+|.++|+++|+++|++|+||+|||+|||||++||++|+.||.++|++ ...++
T Consensus 1 rIya~I~G~~~~~Dg~~-~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~-~~~~~ 78 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYH-MTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGE-AASRV 78 (161)
T ss_dssp CCCEEEEEEEEEECCSC-SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGG-GGTTS
T ss_pred CEEEEEeeEEEeCCCCC-CCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcc-ccccc
Confidence 69999999999999964 45677889999999999999999999999999999999999999999999999975 34578
Q ss_pred eecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy1120 354 LIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPS 401 (883)
Q Consensus 354 ~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~ 401 (883)
+|+|+|+++||+++|||+++++|++++|++++|||++|+.+|+|.++.
T Consensus 79 ~i~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~ 126 (161)
T d2gfva2 79 LVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDL 126 (161)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCS
T ss_pred eeccccccccccHHHHHHHHHHHHHHHhcCCEeccccccccccccccc
Confidence 999999999999999999999999999999999999999999998863
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=8.2e-29 Score=239.50 Aligned_cols=126 Identities=31% Similarity=0.510 Sum_probs=117.7
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCe
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPL 353 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~ 353 (883)
|||++|+|+++++||. ....+.|++.+|..+++++|+++|++|+||||||+|||||+.||++|+.||.++|+. ...++
T Consensus 1 rIya~I~G~~~~~Dg~-~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~-~~~~~ 78 (159)
T d1j3na2 1 RIYAELVGFGRSADAH-HITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGD-HAKRL 78 (159)
T ss_dssp CCCEEEEEEEEEECCS-CSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHH-HHTTC
T ss_pred CEEEEEeEEEEeCCCC-CCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHh-cCCCc
Confidence 6999999999999996 456778899999999999999999999999999999999999999999999999964 23468
Q ss_pred eecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy1120 354 LIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIPS 401 (883)
Q Consensus 354 ~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~ 401 (883)
+|+|+|+++||+++|||+++++|++++|++++|||++|+++|||.++.
T Consensus 79 ~i~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~ 126 (159)
T d1j3na2 79 MVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDL 126 (159)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCS
T ss_pred eEecccccccccccccccchhhhhhhHhhCCEeccccccccccceeee
Confidence 999999999999999999999999999999999999999999998873
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=7.4e-28 Score=232.09 Aligned_cols=122 Identities=26% Similarity=0.369 Sum_probs=115.0
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCe
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPL 353 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~ 353 (883)
.|||+|+|+++++||++ ...+.|++.+|.++|++||+++|++|+||+|||+|||||+++|++|+.||.++|++ ++
T Consensus 1 tIyaei~G~~~~~Dg~~-~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~----~~ 75 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYH-MTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK----EV 75 (158)
T ss_dssp CCCEEEEEEEEEECCSC-SSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS----SS
T ss_pred CEEEEEEEEEEcCCCCC-CcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC----cc
Confidence 38999999999999975 45667889999999999999999999999999999999999999999999999963 58
Q ss_pred eecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 354 LIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 354 ~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+|+|+|+++||+++|||+++++|++++|++++|||++|+++|||.++
T Consensus 76 ~v~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~ 122 (158)
T d1ox0a2 76 PVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIE 122 (158)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCC
T ss_pred cCcCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccC
Confidence 99999999999999999999999999999999999999999999886
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.94 E-value=8.8e-28 Score=232.68 Aligned_cols=122 Identities=27% Similarity=0.409 Sum_probs=112.4
Q ss_pred eEEEEeeeeccCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCC-CCC
Q psy1120 276 YARVVHAKTNCDGYKEQGITYP--SGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGR-TTP 352 (883)
Q Consensus 276 ~a~I~g~~~~~dg~~~~~~~~p--~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~-~~~ 352 (883)
|++|+|+++++||++ ++.| ++.++..+|+++|++++++|+||+|||+|||||+.||++|+.||.++|+... ..+
T Consensus 1 Y~~i~G~~~~~Dg~~---~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~ 77 (161)
T d2ix4a2 1 YAELCGYGMSGDAHH---ITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGT 77 (161)
T ss_dssp CEEEEEEEEEECCSC---SSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSC
T ss_pred CeEEEEEEEcCCCCC---CcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccc
Confidence 899999999999974 5555 5677788899999999999999999999999999999999999999997422 467
Q ss_pred eeecccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 353 LLIGSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 353 ~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
++|+|+|+|+||+++|||+++++|++++|+++.|||++|+++|||.++
T Consensus 78 ~~i~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 125 (161)
T d2ix4a2 78 LAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFD 125 (161)
T ss_dssp SEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCC
T ss_pred eeeeccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccC
Confidence 999999999999999999999999999999999999999999999987
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.2e-26 Score=221.55 Aligned_cols=116 Identities=30% Similarity=0.462 Sum_probs=108.8
Q ss_pred eEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeee
Q psy1120 276 YARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLI 355 (883)
Q Consensus 276 ~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~i 355 (883)
|++|+|+++++||. ++++|++++|.++|+++++++ +.||||||+|||||++||++|+.||.++|++ ..++|
T Consensus 1 Yaei~G~g~~~Dg~---~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~---~~~~v 71 (151)
T d2vbaa2 1 YAEIVGYGATSDGA---DMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGD---KSPAI 71 (151)
T ss_dssp CEEEEEEEEEECCS---CTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTT---CCCEE
T ss_pred CEEEEEEEEecCCC---CCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCC---CCccc
Confidence 89999999999995 488999999999999999876 5789999999999999999999999999964 45789
Q ss_pred cccCCCCCCCcccchhhHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q psy1120 356 GSVKSNIGHSEPASGVCSVTKVILAMENGIIPPNINFKSPRKDIP 400 (883)
Q Consensus 356 gs~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~ 400 (883)
+|+|+++||+++|||+++++|++++|+++.|||++|+++|+|++.
T Consensus 72 ~s~K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 116 (151)
T d2vbaa2 72 SATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAA 116 (151)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCT
T ss_pred ccchhhccccccchhhhhhhHHHHHHHcCCcccccCccccccccc
Confidence 999999999999999999999999999999999999999998765
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.24 E-value=1.1e-11 Score=135.82 Aligned_cols=229 Identities=11% Similarity=0.070 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCce--e
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPS--Y 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps--~ 188 (883)
...|+.+|+.+||++||+++++++- ++++++ .++.. ...+..|...+|++... +
T Consensus 92 ~~~la~~Aa~~aL~~ag~~~~dId~----lI~~t~-t~~~~-------------------P~~a~~v~~~LGl~~~~~~~ 147 (372)
T d1teda_ 92 AVPLAVDVSKRALAGLPYRAAEIGL----LVLATS-TGFIA-------------------PGVDVAIVKELGLSPSISRV 147 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCCGGGEEE----EEEEES-SCCCS-------------------SCHHHHHHHHHTCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEecc-CCCCC-------------------chHHHHHHhhhccCCceeEe
Confidence 4579999999999999999888752 444433 23211 13567899999997543 3
Q ss_pred ee-cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEc
Q psy1120 189 TV-DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQ 267 (883)
Q Consensus 189 tv-~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~ 267 (883)
.+ ..||+|++.||..|...|++|..+.+||.++|...... -..+ -++.....+++||||+++||+
T Consensus 148 ~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~----------~~~d----~~~~~~~~~lfGDGAaA~ll~ 213 (372)
T d1teda_ 148 VVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA----------VFAD----DINDVVIHSLFGDGCAALVIG 213 (372)
T ss_dssp EEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC----------CCCS----SHHHHHHHHHBCEEEEEEEEE
T ss_pred eccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhcccc----------cCCC----cchhhhhhhhhcccceeEEec
Confidence 34 35899999999999999999999999999998633110 0000 011112345689999999998
Q ss_pred cccccc---ceeEEEEeeeecc-C-CCC-------CCCC---CCCC-----HHHHHHHHHHHHHHcCCCCCCccEEEEec
Q psy1120 268 KSKDAK---RVYARVVHAKTNC-D-GYK-------EQGI---TYPS-----GALQQRLLEDFYSECEVDPKNLAWIEAHG 327 (883)
Q Consensus 268 ~~~~A~---~i~a~I~g~~~~~-d-g~~-------~~~~---~~p~-----~~~~~~~i~~al~~agl~~~dI~~ve~hg 327 (883)
+.+... .....+.+..... . ... ..++ ..+. .....++++++|+++|++++|||++-.|-
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq 293 (372)
T d1teda_ 214 ASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHP 293 (372)
T ss_dssp EECTTSCCCTTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECC
T ss_pred cCCcccccCCceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccC
Confidence 765432 2223333332111 0 000 0000 0111 44567889999999999999999999996
Q ss_pred CCCCCCcHHHHHHHHHhhCCCCCCCeeec-ccCCCCCCCcccchhhHHHHHHHHhhcCCC
Q psy1120 328 TGTKVGDPEEVQALENVFCPGRTTPLLIG-SVKSNIGHSEPASGVCSVTKVILAMENGII 386 (883)
Q Consensus 328 tgt~~gD~~E~~Ai~~~f~~~~~~~~~ig-s~K~~~GH~~~AsG~~~li~~~l~l~~~~i 386 (883)
.+.. =..++.+.++-. .+.+... .+-..+||+-+||=...| -..++++.+
T Consensus 294 ~~~~-----i~~~i~~~Lgl~-~ek~~~s~~~l~~~GN~~sasip~~L---~~~l~~g~~ 344 (372)
T d1teda_ 294 GGPK-----IIEQSVRSLGIS-AELAAQSWDVLARFGNMLSVSLIFVL---ETMVQQAES 344 (372)
T ss_dssp SCHH-----HHHHHHHHHTCC-GGGGHHHHHHHHHHCBCTHHHHHHHH---HHHHHSCSS
T ss_pred ccHH-----HHHHHHHHcCCC-HHHhhhhHHHHhccCCcHHHHHHHHH---HHHHHhCCC
Confidence 6543 333455555421 1122110 112345888766533322 234555443
|
| >d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Probable ACP-binding domain of malonyl-CoA ACP transacylase family: Probable ACP-binding domain of malonyl-CoA ACP transacylase domain: Probable ACP-binding domain of malonyl-CoA ACP transacylase species: Escherichia coli [TaxId: 562]
Probab=99.20 E-value=9.1e-12 Score=100.28 Aligned_cols=62 Identities=31% Similarity=0.383 Sum_probs=56.7
Q ss_pred ccccEEEE-cCCHHHHhhcCC-----CCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCC-eeEEcCC
Q psy1120 586 IRGAMAAV-GLGYKDLRSRCP-----PEIEVACHNSPDSSTISGPEENVKKFVAELQADNI-FARTINV 647 (883)
Q Consensus 586 ~~G~M~av-~~~~~~v~~~l~-----~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi-~~~~L~v 647 (883)
+.|+|+|| +++.+++++++. ..|+|||||+|+|+||||+.++|+++.+.+++.|+ ++.+|+|
T Consensus 1 G~G~MaAVlg~~~~~v~~i~~~~~~~~~v~iAN~Nsp~Q~VISG~~~ai~~~~~~~k~~G~kr~i~L~V 69 (70)
T d1mlaa2 1 GTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPV 69 (70)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHHCTTSCEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEECSC
T ss_pred CcEEEEEEeCCCHHHHHHHHHHhcCCCEEEEEecCCCcceeeeCCHHHHHHHHHHHHHcCCceEEECCC
Confidence 36899998 999999999874 34899999999999999999999999999999998 6999998
|
| >d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Probable ACP-binding domain of malonyl-CoA ACP transacylase family: Probable ACP-binding domain of malonyl-CoA ACP transacylase domain: Probable ACP-binding domain of malonyl-CoA ACP transacylase species: Streptomyces coelicolor A3(2) [TaxId: 100226]
Probab=99.04 E-value=3.5e-11 Score=94.27 Aligned_cols=59 Identities=12% Similarity=0.036 Sum_probs=53.5
Q ss_pred ccEEEE-cCCHHHHhhcCC-CCeEEeeecCCCcEEEecCHHHHHHHHHHHHhCCCeeEEcC
Q psy1120 588 GAMAAV-GLGYKDLRSRCP-PEIEVACHNSPDSSTISGPEENVKKFVAELQADNIFARTIN 646 (883)
Q Consensus 588 G~M~av-~~~~~~v~~~l~-~~v~iA~~Nsp~~~visG~~~~l~~l~~~l~~~gi~~~~L~ 646 (883)
|+|+|| +++.+++++++. .+|+|||||||+|+||||+.++|+++.+.+++.+.++++|+
T Consensus 2 ~GM~AVlg~~~~~v~~~~~~~~v~iAn~Nsp~q~VisG~~~av~~~~~~~~~~~~r~~~Lk 62 (62)
T d1nm2a2 2 TGMSALLGGDPEVSVAHLERLGLTPANVNGAGQIVAAGTMEQLAALNEDKPEGVRKVVPLK 62 (62)
T ss_dssp EEEEEEEESCHHHHHHHHHHTTCEEEEEEETTEEEEEEEHHHHHHHHHSCCTTEEEEEECS
T ss_pred ceeEEEcCCCHHHHHHHhhhCCEEEeeeCCCCcEEEECCHHHHHHHHHhHHhCCcEEEECc
Confidence 569998 899999999986 47999999999999999999999999999988888888874
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.01 E-value=4.6e-10 Score=115.86 Aligned_cols=92 Identities=15% Similarity=0.208 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC--Cceeee
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN--GPSYTV 190 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~--Gps~tv 190 (883)
.|+..++.++|+++|+++++++. |++|+..... . ...++..++...|+. -|+++|
T Consensus 29 dL~~~~~~~~l~~~~i~~~~Id~----vi~G~~~~~~------------------~-~~n~ar~~al~aglp~~vpa~tv 85 (268)
T d1m3ka1 29 ELGATVISAVLERAGVAAGEVNE----VILGQVLPAG------------------E-GQNPARQAAMKAGVPQEATAWGM 85 (268)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCE----EEEECSCCTT------------------S-CSCHHHHHHHHTTCCTTSEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcE----EEEeeccccC------------------c-chHHHhHHHHHhCCcccccceee
Confidence 48899999999999999999984 8898764321 1 123566788888884 589999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccCh
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHP 227 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~ 227 (883)
+..|+||+.||++|++.|++|++|++||||+|.+...
T Consensus 86 ~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~ 122 (268)
T d1m3ka1 86 NQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122 (268)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTC
T ss_pred cccCcccchHHHHHHHHHhCCCceEEeeccccccccC
Confidence 9999999999999999999999999999999997654
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=98.91 E-value=1.4e-09 Score=104.66 Aligned_cols=120 Identities=12% Similarity=0.177 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCceeee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPSYTV 190 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps~tv 190 (883)
...|+.+++.+||+++|+++++++ -|++++..+++.. ...+.+|...||.+.+.+.|
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~~dId----lli~~s~t~~~~~-------------------p~~a~~v~~~Lg~~~~~~di 105 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGALEGVD----AVIVATNTPDALF-------------------PDTAALVQARFGLKAFAYDL 105 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEE----EEEEECSSCSEEE-------------------SCHHHHHHHHTTCCCEEEEE
T ss_pred ccHHHHHHHHHHHhhcCcccccce----EEEEecccccccc-------------------cchHHHHHHHhccCccceee
Confidence 567999999999999999998876 2666655444311 23567788889999999999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcccc
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKSK 270 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~~ 270 (883)
..+|++.+.||+.|...+++|..+.+|+.++|.... .+. |+......++||||+++||++.+
T Consensus 106 ~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~-----------~~~-------~~d~~~~~lfGDgAaA~ll~~~~ 167 (172)
T d1ub7a1 106 LAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSK-----------IID-------WNDRATAVLFGDGGGAAVVGKVR 167 (172)
T ss_dssp ECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG-----------TSC-------TTCHHHHTTBCCEEEEEEEECCC
T ss_pred hhccccHHHHHHHHhhhhhcCCcceeEEeccccccc-----------ccC-------CCCcCeEEEecceeEEEEEEEcC
Confidence 999999999999999999999999999999987321 111 22233456789999999998765
Q ss_pred c
Q psy1120 271 D 271 (883)
Q Consensus 271 ~ 271 (883)
+
T Consensus 168 ~ 168 (172)
T d1ub7a1 168 E 168 (172)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=98.84 E-value=2.1e-09 Score=103.72 Aligned_cols=120 Identities=20% Similarity=0.302 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC-ceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG-PSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G-ps~t 189 (883)
...|+.+++.+||+++|+++++++- +++++..+++.. ...+..|...||++. +++-
T Consensus 51 ~~~la~~Aa~~al~~a~~~~~~Id~----li~~s~~~~~~~-------------------P~~a~~v~~~Lgl~~~~~~d 107 (174)
T d1hnja1 51 VSTMGFEAATRAIEMAGIEKDQIGL----IVVATTSATHAF-------------------PSAACQIQSMLGIKGCPAFD 107 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCE----EEEECSCCSCSS-------------------SCHHHHHHHHHTCCSSCEEE
T ss_pred chHHHHHHHHHhhhhcccccccccE----EEEecCCccccc-------------------cchhhhhhhccCCCchhhhh
Confidence 4579999999999999999998873 777766554311 235678999999975 7889
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
|..+|++++.||..|...|++|.++.+|+.++|... +. +.+ +.....+++||||++++|++.
T Consensus 108 i~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S-~~----------~~~-------~d~~~~~lfGDgA~A~vl~~~ 169 (174)
T d1hnja1 108 VAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLA-RT----------CDP-------TDRGTIIIFGDGAGAAVLAAS 169 (174)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHH-HH----------SCT-------TCHHHHTTBCCEEEEEEEEEE
T ss_pred hhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhh-cc----------cCC-------CCCCeEEEeceeeEEEEEEeC
Confidence 999999999999999999999999999999998732 11 111 112234678999999999986
Q ss_pred cc
Q psy1120 270 KD 271 (883)
Q Consensus 270 ~~ 271 (883)
++
T Consensus 170 ~~ 171 (174)
T d1hnja1 170 EE 171 (174)
T ss_dssp SS
T ss_pred CC
Confidence 54
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=98.79 E-value=1e-08 Score=99.47 Aligned_cols=120 Identities=13% Similarity=0.182 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCC-Cceee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVN-GPSYT 189 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gps~t 189 (883)
...|+.+++.+||+++|+++++++ .+++++..+++.. ...+..+...++.+ .+++-
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~~~dId----~li~~s~~~~~~~-------------------p~~a~~v~~~l~~~~~~~~D 114 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVDPAEID----LVVVSTMTNFVHT-------------------PPLSVAIAHELGADNAGGFD 114 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCCS-------------------SCHHHHHHHHHTCTTCEEEE
T ss_pred HHHHhHHHHHhhhhhccCChhHCe----EEEEeccCCcccc-------------------ccHHHHHHHhhcCCCcccee
Confidence 467999999999999999999887 3666665544311 22456788888884 47889
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEccc
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQKS 269 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~~ 269 (883)
+..+|+|++.||+.|..+|++|....+|+.++|... +. +. ++.....+++||||+++||++.
T Consensus 115 v~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s-~~----------~~-------~~d~~~~~lfGDGAaA~ll~~~ 176 (181)
T d1mzja1 115 LSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-DV----------ID-------LADRSLSFLFGDGAGAAVVGPS 176 (181)
T ss_dssp EECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-GG----------SC-------SSCTTTTTTBCEEEEEEEEEEE
T ss_pred HHhhhccHHHHHHHHhCHhhcCCCceeEEeeecccc-cc----------CC-------CCCcceEEEeeeeeEEEEEEeC
Confidence 999999999999999999999999999999999732 11 11 2223456789999999999875
Q ss_pred cc
Q psy1120 270 KD 271 (883)
Q Consensus 270 ~~ 271 (883)
+.
T Consensus 177 ~~ 178 (181)
T d1mzja1 177 DV 178 (181)
T ss_dssp SS
T ss_pred CC
Confidence 43
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=98.77 E-value=6.5e-09 Score=107.70 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceeee
Q psy1120 113 RIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYTV 190 (883)
Q Consensus 113 rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~tv 190 (883)
.|+..++.++|+++|+++++++. |++|+..... .....++..++...|+ +-|+++|
T Consensus 26 dL~~~a~~~al~~~~i~~~~Id~----vi~G~v~~~g------------------~~~~n~aR~~al~aGlp~~vp~~tV 83 (273)
T d1ulqa1 26 DLLAHALSVLVDRSGVPKEEVED----VYAGCANQAG------------------EDNRNVARMALLLAGFPVEVAGCTV 83 (273)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCE----EEEECSCCSS------------------TTTTTHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCE----EEEEeccccc------------------cccccHHHHHHHHcCCCCccceEEE
Confidence 37889999999999999999984 8999754321 1112356667777787 4499999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccCh
Q psy1120 191 DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHP 227 (883)
Q Consensus 191 ~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~ 227 (883)
+.+|+||+.||++|++.|++|+.|++|+||+|.++..
T Consensus 84 n~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~ 120 (273)
T d1ulqa1 84 NRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRA 120 (273)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSC
T ss_pred ecccchHHHHHHHHHHHHhcCCCccceeeeccccchh
Confidence 9999999999999999999999999999999997653
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.68 E-value=1.1e-08 Score=104.77 Aligned_cols=92 Identities=22% Similarity=0.277 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHH-HCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCceee
Q psy1120 113 RIILEKTYEAVI-DAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGPSYT 189 (883)
Q Consensus 113 rl~l~aa~eALe-dAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gps~t 189 (883)
.|+.+++.++|+ ++|+++++++. |++|+...... ....++..++...|+ .-|.++
T Consensus 32 dL~~~~i~~~l~r~agi~~~~Id~----vi~G~v~~~~~------------------~g~n~aR~~al~ag~p~~vp~~t 89 (262)
T d1wdkc1 32 DMSAHLISKVLERNSKVDPGEVED----VIWGCVNQTLE------------------QGWNIARMASLMTQIPHTSAAQT 89 (262)
T ss_dssp HHHHHHHHHHHHHCTTSCGGGEEE----EEEECSSBSBT------------------TTTTHHHHHHTTSSSCTTSEEEE
T ss_pred HHHHHHHHHHHHhcCCCCHHHeeE----EEEEeeccccc------------------ccccchhhhHhhhhcccccchhh
Confidence 578899999999 59999998874 88887543210 011245566666676 348999
Q ss_pred ecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccC
Q psy1120 190 VDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLH 226 (883)
Q Consensus 190 v~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~ 226 (883)
|+..|+||+.||++|++.|++|+.|++|+||+|.|..
T Consensus 90 V~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 90 VSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred ccccccHHHHHHHHHHHHHHhhcCCceeeeccccccc
Confidence 9999999999999999999999999999999999765
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.56 E-value=5.2e-08 Score=100.07 Aligned_cols=92 Identities=16% Similarity=0.201 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHH----CCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCC--CCc
Q psy1120 113 RIILEKTYEAVID----AGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGV--NGP 186 (883)
Q Consensus 113 rl~l~aa~eALed----AG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l--~Gp 186 (883)
.|+..++.++|++ +|+++++++. |++|+.... +. ...++..++..-|+ .-|
T Consensus 37 ~L~~~~i~~~l~r~~~~~~idp~~Id~----vi~G~v~~~------------------g~-~~~~aR~~al~aglp~~vp 93 (269)
T d1afwa1 37 YLLYNFLNEFIGRFPEPLRADLNLIEE----VACGNVLNV------------------GA-GATEHRAACLASGIPYSTP 93 (269)
T ss_dssp HHHHHHHHHHHHTSCHHHHTCGGGCCC----EEEECSSSB------------------GG-GHHHHHHHHHHTTCCTTSC
T ss_pred HHHHHHHHHHHHhCCccccCChhhcCE----EEecccccc------------------cc-ccccchhhhhhcccccccc
Confidence 3677788888864 5799999885 888875432 11 12356667777787 569
Q ss_pred eeeecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccCh
Q psy1120 187 SYTVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHP 227 (883)
Q Consensus 187 s~tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~ 227 (883)
.++|+..|+||+.||+.|++.|++|+.|++|+||+|.|...
T Consensus 94 a~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~ 134 (269)
T d1afwa1 94 FVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNN 134 (269)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHH
T ss_pred chhccccchHHHHHHHHHHHHHhhccccceeeeeccccccc
Confidence 99999999999999999999999999999999999997653
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.51 E-value=1.5e-07 Score=92.43 Aligned_cols=117 Identities=11% Similarity=0.093 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--cee
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSY 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~ 188 (883)
...|+.+|+.+||+++|+++++++- ++++++. ++. .+ ..+..+...+++.+ +.+
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~dId~----lI~~s~t-~~~------------------~P-~~aa~v~~~lg~~~~~~~~ 130 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLATDIDV----IIYVSCT-GFM------------------MP-SLTAWLINEMGFDSTTRQI 130 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSE----EEEECSS-SCC------------------SS-CHHHHHHHHTTCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHcCCChhhhhe----EEEeccC-CCC------------------cc-hhHHHHHHHHhcCCCeeEe
Confidence 3469999999999999999999873 5555433 211 11 25667888999875 345
Q ss_pred ee-cccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCC----CCcccccceEE
Q psy1120 189 TV-DSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAA----NGYCRSEAVCI 263 (883)
Q Consensus 189 tv-~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~----~G~~~gEGa~~ 263 (883)
.+ +.+|+|++.+|+.|...|++|..+.|||.++|.+..- +. +-|.+. ...++||||++
T Consensus 131 ~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S~~-----------~~------~~d~~~~~~~~~~lFgDGAaA 193 (200)
T d1u0ma1 131 PIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLC-----------YQ------PTDLGVGSLLCNGLFGDGIAA 193 (200)
T ss_dssp EECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGGG-----------CC------TTCCSHHHHHHHHHBCEEEEE
T ss_pred ccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEeccccc-----------cC------CCCCChhhhhcccccccccEE
Confidence 55 5799999999999999999999999999999973311 11 111111 13467999999
Q ss_pred EEEcc
Q psy1120 264 MYLQK 268 (883)
Q Consensus 264 vvL~~ 268 (883)
+||..
T Consensus 194 ~ll~~ 198 (200)
T d1u0ma1 194 AVVRG 198 (200)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 99975
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.44 E-value=4.5e-07 Score=91.22 Aligned_cols=124 Identities=10% Similarity=0.085 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCceEEEEccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCCce--e
Q psy1120 111 MCRIILEKTYEAVIDAGINPKSLRGSKTGVFIGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNGPS--Y 188 (883)
Q Consensus 111 ~~rl~l~aa~eALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gps--~ 188 (883)
...|+.+++.+||++||+++++++ .|++.++++++. +. .+..+-..+++.... +
T Consensus 102 ~~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~~~~-------------------p~-~~a~~~~~l~~~~~~~~~ 157 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQPKSKIT----HLIVCTTSGVDM-------------------PG-ADYQLTKLLGLRPYVKRY 157 (235)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSCCCS-------------------SC-HHHHHHHHHTCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHcCCChhHCc----EEEEecccCCcc-------------------Cc-cHHHHHHHHhcCCCceEE
Confidence 457999999999999999998887 366666544321 11 234566667765432 3
Q ss_pred -eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEc
Q psy1120 189 -TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQ 267 (883)
Q Consensus 189 -tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~ 267 (883)
.+..+|++++.||..|...|++|..+.|||.++|....- +..+.. ..++.--..+++||||+++||.
T Consensus 158 ~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S~~-----------~~~~d~-~~~~~~v~~~lFGDGA~A~vl~ 225 (235)
T d1bi5a1 158 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVT-----------FRGPSD-THLDSLVGQALFGDGAAALIVG 225 (235)
T ss_dssp EEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGT-----------CCCCCT-TCHHHHHHHHHBCCEEEEEEEE
T ss_pred eeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeeeccee-----------cCCCCC-CchhhhcceeeeccceEEEEEe
Confidence 357789999999999999999999999999999973321 111000 0000000134679999999998
Q ss_pred ccc
Q psy1120 268 KSK 270 (883)
Q Consensus 268 ~~~ 270 (883)
...
T Consensus 226 ~~p 228 (235)
T d1bi5a1 226 SDP 228 (235)
T ss_dssp SSC
T ss_pred cCC
Confidence 643
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=98.28 E-value=2.1e-07 Score=82.36 Aligned_cols=95 Identities=19% Similarity=0.125 Sum_probs=68.2
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-----hC-C
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-----FC-P 347 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-----f~-~ 347 (883)
+++|+|++++......... +.+-..+++++|+++|++++|||++|.| |+.|...+ +. .
T Consensus 1 KPlA~i~~~~~~g~~P~~~------~~~P~~A~~~~L~r~gl~~~Did~~Ein----------EAFAaq~l~~~~~~~l~ 64 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPRIM------GIGPVPATRKALERAGLSFSDLGLIELN----------EAFAAQALAVLREWSLS 64 (125)
T ss_dssp CCSEEEEEEEEEECCGGGG------GGTHHHHHHHHHHHTTCCGGGCSEEEEC----------CSBHHHHHHHHHHHTCC
T ss_pred CCeEEEEEEEEEecCHHHH------hhccHHHHHhHhhccCcCccccchheec----------cccchhHHHHHHHhhcc
Confidence 4689999998765432211 1235789999999999999999999999 54443322 21 1
Q ss_pred CCCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 348 GRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 348 ~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
-..+.+.+...--.+||+.||||...++.++..|+++
T Consensus 65 ~d~~kvN~~GGaIAlGHP~GASGari~~tl~~~L~~~ 101 (125)
T d1ulqa2 65 MEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR 101 (125)
T ss_dssp TTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CchhhcCCCCCcccccCCccccchhHHHHHHHHHHhc
Confidence 1223455555555589999999999999999999864
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.28 E-value=1.1e-07 Score=84.20 Aligned_cols=94 Identities=12% Similarity=0.110 Sum_probs=68.6
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-----hCCC
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-----FCPG 348 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-----f~~~ 348 (883)
+++|+|++++......... +.+-..+++++|+++|++.+|||+||.| |+.|...+ ++-
T Consensus 4 ~plAri~~~a~~g~~P~~m------~~gPv~Ai~klL~r~gl~~~Did~~Ein----------EAFA~q~l~~~~~l~i- 66 (124)
T d1afwa2 4 PVLGRYIDFQTVGVPPEIM------GVGPAYAIPKVLEATGLQVQDIDIFEIN----------EAFAAQALYCIHKLGI- 66 (124)
T ss_dssp CCCEEEEEEEEEECCGGGG------GGHHHHHHHHHHHHHTCCGGGCSEEEEC----------CSBHHHHHHHHHHHTC-
T ss_pred cEEEEEEEEEEEecCHHHh------hhChHHHHHHHHHHcCCCcccCcEEEec----------cchhHHHHHHHHHcCC-
Confidence 5789999998765432211 3356899999999999999999999999 55444433 321
Q ss_pred CCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 349 RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 349 ~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
..+++.+...--.+||+.||||...++.++..|+++
T Consensus 67 d~~kvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~~ 102 (124)
T d1afwa2 67 DLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD 102 (124)
T ss_dssp CGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT
T ss_pred ChhhccccCccceecCCcCCchHHHHHHHHHHhccC
Confidence 123344444444579999999999999999999865
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=98.20 E-value=2.1e-07 Score=82.19 Aligned_cols=94 Identities=18% Similarity=0.120 Sum_probs=68.3
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-----hCCC
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-----FCPG 348 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-----f~~~ 348 (883)
+++|+|++++......... +.+-..+++++|+++|++.+|||+||.| |+.|...+ ++-
T Consensus 2 ~Plari~~~a~~g~dP~~m------g~~Pv~A~~~lL~r~gl~~~Did~~Ein----------EAFA~q~la~~~~l~i- 64 (124)
T d1m3ka2 2 QPLGRIVSWATVGVDPKVM------GTGPIPASRKALERAGWKIGDLDLVEAN----------EAFAAQACAVNKDLGW- 64 (124)
T ss_dssp CCSEEEEEEEEEECCGGGG------GGTHHHHHHHHHHHHTCCGGGCSEEEEC----------CSBHHHHHHHHHHHCC-
T ss_pred CcEEEEEEEEEEecChHHh------ccchHHHHHHHHHHcCCChhcccHHHhc----------ccchhheeeehHhhCC-
Confidence 4689999998755432222 2335889999999999999999999999 55444433 321
Q ss_pred CCCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 349 RTTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 349 ~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
..+.+.+...--.+||+.||||...++.++..|+++
T Consensus 65 d~~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~~~ 100 (124)
T d1m3ka2 65 DPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR 100 (124)
T ss_dssp CGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCCCCccccccCcCccchhHHHHHHHHHHhc
Confidence 223444444445589999999999999999999764
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.19 E-value=4.1e-07 Score=86.60 Aligned_cols=111 Identities=11% Similarity=0.158 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCceEEE-EccCCCchhhhhhhhhhccCCccccccchhhHHHHHHHhhCCCC--cee
Q psy1120 112 CRIILEKTYEAVIDAGINPKSLRGSKTGVF-IGACFSESEKTWFYEKLQINGFGITGCSRAMLANRVSYWLGVNG--PSY 188 (883)
Q Consensus 112 ~rl~l~aa~eALedAG~~~~~~~~~~~gv~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~G--ps~ 188 (883)
..|+++++.++|++.+ +++ ++++ +++..+++. ....+..+...+|++. .++
T Consensus 51 ~~ma~~Aa~~al~~~~--~~~-----id~li~~t~~~~~~-------------------~p~~a~~v~~~lg~~~~~~~~ 104 (166)
T d1xpma1 51 VSMGANAAKDIITDED--KKK-----IGMVIVATESAVDA-------------------AKAAAVQIHNLLGIQPFARCF 104 (166)
T ss_dssp HHHHHHHHHTTCCHHH--HHH-----EEEEEEECSSCSBS-------------------SSCHHHHHHHHTTCCSSCEEE
T ss_pred HHHHHHHHHhhhcccc--CCC-----CCeEEEeccccccc-------------------cchhHHHHHHhhccccceEEe
Confidence 4588888888887654 333 4444 444433321 1235677888899864 678
Q ss_pred eecccchhHHHHHHHHHHHHhcCCCCcEEEeccccccChhhHHHHHhcCCCCCCCCCCCcccCCCCcccccceEEEEEcc
Q psy1120 189 TVDSACSSSLYALEHAYKSIRDGHCNAAFVGGCNLCLHPYVSLQFARLGVLSPDGRCKSFDEAANGYCRSEAVCIMYLQK 268 (883)
Q Consensus 189 tv~tacsSsl~Al~~A~~~l~~G~~d~alvgG~~~~~~~~~~~~~~~~~~ls~~g~~~pfd~~~~G~~~gEGa~~vvL~~ 268 (883)
.+..+|++++.||..|...|++|....+||.+.|..... ++ ..+-+..||||++++|++
T Consensus 105 dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~~--------------------~~-~~~~~~fGDGA~A~ll~~ 163 (166)
T d1xpma1 105 EMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYG--------------------LN-SGGEPTQGAGAVAMVIAH 163 (166)
T ss_dssp EEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECCC--------------------TT-CSSGGGCEEEEEEEEEEE
T ss_pred eecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEecc--------------------CC-CCCCccCCCeeEEEEEec
Confidence 899999999999999999999999999999999852210 11 122367899999999987
Q ss_pred c
Q psy1120 269 S 269 (883)
Q Consensus 269 ~ 269 (883)
.
T Consensus 164 ~ 164 (166)
T d1xpma1 164 N 164 (166)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.14 E-value=2.3e-07 Score=82.56 Aligned_cols=95 Identities=12% Similarity=0.049 Sum_probs=67.1
Q ss_pred ceeEEEEeeeeccCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHh-----hCCC
Q psy1120 274 RVYARVVHAKTNCDGYKEQGITYPSGALQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENV-----FCPG 348 (883)
Q Consensus 274 ~i~a~I~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~-----f~~~ 348 (883)
+++++|++++......... +.+...+++++|+++|++.+|||++|.| |+.|...+ +...
T Consensus 3 ~pla~i~~~~~~g~dP~~m------g~~p~~A~~klL~ragl~~~did~~Ein----------EAFA~q~l~~~~~~~~~ 66 (128)
T d1wdkc2 3 EPLAVIRSMAVAGVDPAIM------GYGPVPATQKALKRAGLNMADIDFIELN----------EAFAAQALPVLKDLKVL 66 (128)
T ss_dssp CCSEEEEEEEEEECCGGGG------GGTHHHHHHHHHHHHTCCGGGCCEEEEC----------CSBHHHHHHHHHHTTCG
T ss_pred CEEEEEEEEEEEecCHHHh------ccCcHHHHHHHhhhcCccccccceEEee----------cccchhhhhhhhhcccc
Confidence 4789999998765432221 2345889999999999999999999999 54443332 1110
Q ss_pred C--CCCeeecccCCCCCCCcccchhhHHHHHHHHhhcC
Q psy1120 349 R--TTPLLIGSVKSNIGHSEPASGVCSVTKVILAMENG 384 (883)
Q Consensus 349 ~--~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l~~~ 384 (883)
. .+++.+...--.+||+.||||+..++.++..|+++
T Consensus 67 ~~~~ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~ 104 (128)
T d1wdkc2 67 DKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN 104 (128)
T ss_dssp GGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcceecCCCCcccccccccccchhHHHHHHHHHHhc
Confidence 0 12344444444579999999999999999999764
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.97 E-value=0.55 Score=41.84 Aligned_cols=78 Identities=12% Similarity=0.094 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHH
Q psy1120 301 LQQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILA 380 (883)
Q Consensus 301 ~~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~ 380 (883)
...++++++|+++|++++|||++..|-.+ ..=.+++.+.++-.. ++... ++-..+||+-+||=...|. .+
T Consensus 49 ~v~~~i~~~L~~~gl~~~dId~~i~Hqa~-----~~i~~~v~~~lgl~~-ek~~~-~~~~~~GNt~sasip~~L~---~a 118 (148)
T d1u6ea2 49 KMGDVGRRAMDAAGVRPDQIDVFVPHQAN-----SRINELLVKNLQLRP-DAVVA-NDIEHTGNTSAASIPLAMA---EL 118 (148)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEECCSC-----HHHHHHHHHHHTCCT-TCEEC-CTHHHHCBCGGGHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCcccccEEEecccc-----HHHHHHHHHhcCCCc-hhhhh-hhHHhhCCCccchHHHHHH---HH
Confidence 34578999999999999999999999443 445667777775321 22222 2223568888776554444 35
Q ss_pred hhcCCCCC
Q psy1120 381 MENGIIPP 388 (883)
Q Consensus 381 l~~~~ipp 388 (883)
++.+.+.|
T Consensus 119 ~~~g~i~~ 126 (148)
T d1u6ea2 119 LTTGAAKP 126 (148)
T ss_dssp HHHTSSCT
T ss_pred HHcCCCCC
Confidence 55565543
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=84.07 E-value=1.8 Score=39.32 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=24.4
Q ss_pred HHHHHHHcCCCccEEeecCHHHHHHHHHhc
Q psy1120 533 LVDILRALNITPDHIIGHSVGELGCAYADG 562 (883)
Q Consensus 533 l~~ll~~~Gi~P~~v~GHSlGE~aAa~~aG 562 (883)
+.+++++.+.++-.++|||+|-+.|.+++.
T Consensus 58 i~~~~~~~~~~~v~lvGHSmGG~va~~~~~ 87 (179)
T d1ispa_ 58 VQKVLDETGAKKVDIVAHSMGGANTLYYIK 87 (179)
T ss_dssp HHHHHHHHCCSCEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHhcCCceEEEEeecCcCHHHHHHHH
Confidence 345667789999999999999999887653
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=82.14 E-value=1.1 Score=39.71 Aligned_cols=76 Identities=13% Similarity=0.122 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEecCCCCCCcHHHHHHHHHhhCCCCCCCeeecccCCCCCCCcccchhhHHHHHHHHh
Q psy1120 302 QQRLLEDFYSECEVDPKNLAWIEAHGTGTKVGDPEEVQALENVFCPGRTTPLLIGSVKSNIGHSEPASGVCSVTKVILAM 381 (883)
Q Consensus 302 ~~~~i~~al~~agl~~~dI~~ve~hgtgt~~gD~~E~~Ai~~~f~~~~~~~~~igs~K~~~GH~~~AsG~~~li~~~l~l 381 (883)
..++|+++|+++|++++|||++..|-.+ ..=.+++.+.++-.. +..+ ..+ ...||+-+|+=...| ...+
T Consensus 49 vp~~i~~~L~~~g~~~~dId~~i~Hqa~-----~~~~~~i~~~lgi~~-~k~~-~~~-~~~Gn~~sasip~~L---~~~~ 117 (149)
T d1ub7a2 49 MNTATLEAIEKAGLTPEDIRLFVPHQAN-----LRIIDAARERLGLPW-ERVA-VNV-DRYGNTSTASIPLAL---KEAV 117 (149)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSC-----HHHHHHHHHTTTCCG-GGBC-CCH-HHHCBCGGGHHHHHH---HHHH
T ss_pred HHHHHHHHHHhhccccccccEEEeeccc-----hHHHHHHHhhccchh-hHHH-HHH-HHhcCCcchhHHHHH---HHHH
Confidence 3478999999999999999999999433 334445555554211 1221 122 346888887655443 3455
Q ss_pred hcCCCCC
Q psy1120 382 ENGIIPP 388 (883)
Q Consensus 382 ~~~~ipp 388 (883)
+.+.+.|
T Consensus 118 ~~~~~~~ 124 (149)
T d1ub7a2 118 DAGRIRE 124 (149)
T ss_dssp HHTSSCT
T ss_pred HcCCCCC
Confidence 6665544
|